Statistics are available for these assemblies of the human genome:
|-----Ordered------| |------Random------| Chr Assembled Size Sequenced Total Gap Non-Euch. Non-Euch. Euch. Gap Euch. Gap Bases in Unplaced Map Contig N50 Map Map Contig N50 Map Name (inc. Gaps) Size Size Gap Size Gap Count Size Count Auxiliary Clones Count Contig Count Contig ---------------------------------------------------------------------------------------------------------------------------------------------------- 1 247249719 224999719 22250000 20240000 2 2010000 39 1213265 39 56413061 10 136815 2 242951149 237712649 5238500 4200000 3 1038500 15 185571 18 68373980 1 185571 3 199501827 194704827 4797000 4490000 4 307000 3 599256 5 100530253 4 143068 4 191273063 187297063 3976000 3010000 2 966000 12 642648 14 23438009 5 161147 5 180857866 177702766 3155100 3083000 3 72100 4 143687 6 41199371 1 143687 6 170899992 167273992 3626000 3008000 3 618000 8 1825562 9 48945890 2 1305230 7 158821424 154952424 3869000 3184000 5 685000 7 449659 12 47690382 3 153959 8 146274826 142612826 3662000 3000000 1 662000 9 593089 10 38454502 8 46082 9 140273252 120143252 20130000 18000000 2 2130000 38 846075 39 39653686 7 154740 10 135374737 131624737 3750000 2380000 1 1370000 18 113253 18 30112613 1 113275 11 134452384 131130853 3321531 3257000 3 64531 5 115294 8 38509590 3 35155 12 132349534 130303534 2046000 1471000 3 575000 5 - 7 32815934 - - 13 114142980 95559980 18583000 17933000 4 650000 4 186858 5 67740325 1 186858 14 106368585 88290585 18078000 18078000 3 0 0 - 1 88290585 - - 15 100338915 81341915 18997000 18260000 2 737000 10 582888 11 53619965 5 119514 16 88827254 78884754 9942500 9805000 3 137500 3 105485 5 25336229 1 105485 17 78774742 77800220 974522 220000 2 754522 8 1816091 10 21163833 17 117663 18 76117153 74656155 1460998 1363998 1 97000 3 4262 5 20074199 1 4262 19 63811651 55785651 8026000 8016000 5 10000 2 251858 4 15825424 2 159169 20 62435964 59505253 2930711 1773661 2 1157050 4 - 6 26144333 - - 21 46944323 34171998 12772325 12769767 3 2558 2 1279693 4 28617429 9 152296 22 49691432 34851332 14840100 14430000 3 410100 9 207318 9 4248192 2 166566 X 154913754 151058754 3855000 3000000 1 855000 15 1519168 17 27718692 5 1005289 Y 57772954 25652954 32120000 30500000 3 1620000 11 - 17 6265435 - - M 16571 16571 0 0 0 0 0 - 1 16571 - - ---------------------------------------------------------------------------------------------------------------------------------------------------- Overall Chrom 3080436051 2858034764 222401287 205472426 64 16928861 234 12680980 280 38509590 88 178865
|-----Ordered------| |------Random------| Chr Assembled Size Sequenced Total Gap Non-Euch. Non-Euch. Euch. Gap Euch. Gap Bases in Unplaced Map Contig N50 Map Map Contig N50 Map Name (inc. Gaps) Size Size Gap Size Gap Count Size Count Auxiliary Clones Count Contig Count Contig ---------------------------------------------------------------------------------------------------------------------------------------------------- 1 245522847 222827847 22695000 2370000 3 20325000 40 3247110 37 56331646 14 1637740 2 243018229 237506229 5512000 4200000 3 1312000 18 368158 21 68373980 2 185571 3 199505740 194635740 4870000 4400000 2 470000 4 770716 5 100530261 5 146010 4 191411218 187161218 4250000 3010000 2 1240000 13 780282 15 23438009 6 161147 5 180857866 177702766 3155100 3083000 3 72100 4 143687 6 41199371 1 143687 6 170975699 167317699 3658000 3058000 4 600000 7 1825562 9 48945890 2 1305230 7 158628139 154759139 3869000 3184000 5 685000 7 628964 12 47497097 4 179305 8 146274826 142612826 3662000 3000000 1 662000 9 593089 10 38454502 8 183161 9 138429268 117781268 20648000 18000000 2 2648000 44 962306 42 39435726 8 173443 10 135413628 131613628 3800000 2530000 4 1270000 17 113253 19 30112613 1 113275 11 134452384 131130853 3321531 3257000 3 64531 5 - 8 38509590 - - 12 132449811 130259811 2190000 1471000 3 719000 6 466818 8 32815934 1 466818 13 114142980 95559980 18583000 17933000 4 650000 4 186858 5 67740325 1 186858 14 106368585 88290585 18078000 18078000 3 0 0 - 1 88290585 - - 15 100338915 81341915 18997000 18260000 2 737000 10 582888 11 53619965 5 139260 16 88827254 78884754 9942500 9805000 3 137500 3 105485 5 42003582 1 105485 17 78774742 77800220 974522 220000 2 754522 8 1816488 10 21163833 17 147354 18 76117153 74656155 1460998 1363998 1 97000 3 4262 5 20074199 1 4262 19 63811651 55785651 8026000 8016000 5 10000 2 251858 4 31383029 2 159169 20 62435964 59505253 2930711 1773661 2 1157050 4 - 6 26144333 - - 21 46944323 34171998 12772325 12769767 3 2558 2 - 4 28617429 - - 22 49554710 34764810 14789900 14450000 4 339900 9 207318 10 23276302 2 166566 X 154824264 150394264 4430000 3000000 1 1430000 20 1519168 21 27718692 5 1005289 Y 57701691 24871691 32830000 31000000 2 1830000 13 - 17 6265435 - - M 16571 16571 0 0 0 0 0 - 1 16571 - - ---------------------------------------------------------------------------------------------------------------------------------------------------- Overall Chrom 3076798458 2851352871 225445587 188232426 67 37213161 252 14574270 292 38509590 86 185571
|-----Ordered------| |------Random------| Chr Assembled Size Sequenced Total Gap Non-Euch. Non-Euch. Euch. Gap Euch. Gap Bases in Unplaced Map Contig N50 Map Map Contig N50 Map Name (inc. Gaps) Size Size Gap Size Gap Count Size Count Auxiliary Clones Count Contig Count Contig ---------------------------------------------------------------------------------------------------------------------------------------------------- 1 246127941 221562941 24565000 20320000 3 4245000 68 5265961 65 12454193 26 201427 2 243615958 237544458 6071500 4200000 3 1871500 20 804831 23 68373978 7 176839 3 199344050 194474050 4870000 4400000 2 470000 4 599256 5 100530261 4 146010 4 191731959 186841959 4890000 3010000 2 1880000 15 398024 17 23437590 6 130654 5 181034922 177552822 3482100 3090000 3 392100 10 143687 12 21842058 1 143687 6 170914576 167256576 3658000 3058000 4 600000 7 1955751 9 48884767 3 1298215 7 158545518 154676518 3869000 3184000 5 685000 7 482637 12 47493540 4 153959 8 146308819 142347919 3960900 3000000 1 960900 12 946180 14 37749236 12 183161 9 136372045 115624045 20748000 19655000 36 1093000 18 2165869 47 34730795 13 180582 10 135037215 131173215 3864000 2494000 4 1370000 21 843747 23 30112613 5 239523 11 134482954 130908954 3574000 3330000 3 244000 6 - 9 38489089 - - 12 132078379 129826379 2252000 1471000 3 781000 7 - 9 32815934 - - 13 113042980 95559980 17483000 16833000 4 650000 4 189598 5 67740325 1 189598 14 105311216 87191216 18120000 18120000 3 0 0 - 1 87191216 - - 15 100256656 81259656 18997000 18260000 2 737000 10 728715 11 53619965 9 119514 16 90041932 79932432 10109500 9805000 3 304500 11 - 13 19977173 - - 17 81860266 77677744 4182522 3158000 3 1024522 10 1695305 12 17922183 18 147354 18 76115139 74654141 1460998 1363998 1 97000 3 4262 5 20074199 1 4262 19 63811651 55785651 8026000 8016000 5 10000 2 92689 4 31383029 1 92689 20 63741868 59424990 4316878 4105000 4 211878 4 - 7 24982290 - - 21 46976097 33924367 13051730 12978622 3 73108 3 - 5 28602116 - - 22 49396972 34352072 15044900 14450000 4 594900 10 - 11 23178213 - - X 153692391 149215391 4477000 3037000 2 1440000 21 2899052 22 19073427 11 832153 Y 50286555 24649555 25637000 25037000 3 600000 8 - 11 6323261 - - M 16571 16571 0 0 0 0 0 - 1 16571 - - Un - - - - - - - 2599625 - - 16 182896 ---------------------------------------------------------------------------------------------------------------------------------------------------- Overall Chrom 3070144630 2843433602 226711028 206375620 106 20335408 281 19215564 353 29104798 138 185571
Category Contigs Bases (incl. N's) Real Bases N50 Map Contig ----------------------------------------------------------------------------- Euchromatin 372 2,825,640,200 2,825,631,540 27,332,148 Heterochromatin 33 6,601,238 6,601,238 248,267 Unlocalized 138 25,263,129 25,065,625 186,888 Alt-haplotype 2 8,996,941 8,996,941 4,498,470 ----------------------------------------------------------------------------- Overall 545 2,866,501,508 2,866,295,344 26,259,569
The following set of UCSC summary statistics differ slightly from those reported by NCBI in these ways:
|-----Ordered------| |------Random------| Chr Assembled Size Sequenced Total Gap Non-Euch. Non-Euch. Euch. Gap Euch. Gap Bases in Unplaced Map Contig N50 Map Map Contig N50 Map Name (inc. Gaps) Size Size Gap Size Gap Count Size Count Auxiliary Clones Count Contig Count Contig ---------------------------------------------------------------------------------------------------------------------------------------------------- 1 245203898 218712898 26491000 21100000 4 5391000 105 9962637 94 5417179 53 184644 2 243315028 237043677 6271351 4200000 3 2071351 22 964032 22 68373974 11 172807 3 199411731 193607233 5804498 4613000 4 1191498 17 373185 15 29247566 2 201725 4 191610523 186580523 5030000 3000000 1 2030000 16 819494 18 23437594 9 139078 5 180967295 177524972 3442323 3050000 2 392323 15 - 12 21842058 - - 6 170740541 166880541 3860000 3110000 4 750000 9 11611844 11 48884767 10 4265243 7 158431299 154546299 3885000 3200000 5 685000 7 755352 13 47493540 7 149466 8 145908738 141694337 4214401 3200000 2 1014401 15 377716 17 37699987 2 199315 9 134505819 115187719 19318100 17000000 2 2318100 48 2036476 44 34895695 11 185143 10 135480874 130710874 4770000 3100000 3 1670000 25 610249 26 30112630 3 179013 11 134978784 130709420 4269364 3550000 3 719364 8 150110 10 38488550 1 150110 12 133464434 129328334 4136100 3085000 3 1051100 11 490431 11 32815934 3 165593 13 114151656 95511656 18640000 17970000 4 670000 5 364659 6 55334817 2 184590 14 105311216 87191216 18120000 18120000 3 0 0 - 1 87191216 - - 15 100114055 81117055 18997000 18260000 2 737000 10 316089 11 53614549 2 182896 16 89995999 79890795 10105204 9800000 2 305204 13 24360 13 19938058 1 24360 17 81691216 77480855 4210361 3110000 3 1100361 11 287440 13 17920314 2 182945 18 77753510 74534531 3218979 3000000 1 218979 4 - 6 20074199 - - 19 63790860 55780860 8010000 8000000 3 10000 2 251858 4 31383029 2 159169 20 63644868 59424990 4219878 4008000 3 211878 4 - 7 24982290 - - 21 46976537 33924747 13051790 12978622 3 73168 8 - 5 28602556 - - 22 49476972 34352072 15124900 14530000 4 594900 10 - 11 23178213 - - X 152634166 147686666 4947500 3055000 3 1892500 36 4209112 29 19044037 14 548553 Y 50961097 22761097 28200000 25000000 2 3200000 5 191708 6 6380532 1 191708 M 16571 16571 0 0 0 0 0 - 1 16571 - - Un - - - - - - - 461077 - - 4 99952 ---------------------------------------------------------------------------------------------------------------------------------------------------- Overall Chrom 3070537687 2832199938 238337749 210039622 69 28298127 406 33796752 406 26259569 140 221307