This directory contains reciprocal-best netted chains for hg38-susScr11.

 - hg38.susScr11.rbest.net.gz: hg38-referenced recip.best net to susScr11.
 - hg38.susScr11.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hg38 to susScr11 through the recip.best net.

 - susScr11.hg38.rbest.net.gz: susScr11-referenced recip.best net.
 - susScr11.hg38.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/hg38.susScr11.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                         Last modified      Size  Description
      Parent Directory                                  -   
      axtRBestNet/                 2017-08-02 11:13    -   
      hg38.susScr11.rbest.chain.gz 2017-08-02 00:15   79M  
      hg38.susScr11.rbest.net.gz   2017-08-02 00:18  148M  
      md5sum.txt                   2017-08-02 00:18  248   
      susScr11.hg38.rbest.chain.gz 2017-08-02 00:14   79M  
      susScr11.hg38.rbest.net.gz   2017-08-02 00:12  130M