This directory contains reciprocal-best netted chains for hg38-micMur3.
- hg38.micMur3.rbest.net.gz: hg38-referenced recip.best net to micMur3.
- hg38.micMur3.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to micMur3 through the recip.best net.
- micMur3.hg38.rbest.net.gz: micMur3-referenced recip.best net.
- micMur3.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.micMur3.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-03-04 16:24 -
hg38.micMur3.rbest.chain.gz 2017-03-04 12:01 35M
hg38.micMur3.rbest.net.gz 2017-03-04 12:02 67M
md5sum.txt 2017-03-04 12:02 244
micMur3.hg38.rbest.chain.gz 2017-03-04 12:00 35M
micMur3.hg38.rbest.net.gz 2017-03-04 12:00 69M