This directory contains reciprocal-best netted chains for hg19-panTro6. - hg19.panTro6.rbest.net.gz: hg19-referenced recip.best net to panTro6. - hg19.panTro6.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from hg19 to panTro6 through the recip.best net. - panTro6.hg19.rbest.net.gz: panTro6-referenced recip.best net. - panTro6.hg19.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/hg19.panTro6.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-12-14 15:40 - hg19.panTro6.rbest.chain.gz 2018-12-14 14:43 11M hg19.panTro6.rbest.net.gz 2018-12-14 14:44 18M md5sum.txt 2018-12-14 14:44 244 panTro6.hg19.rbest.chain.gz 2018-12-14 14:43 11M panTro6.hg19.rbest.net.gz 2018-12-14 14:43 17M