This directory contains reciprocal-best netted chains for hg19-panTro5. - hg19.panTro5.rbest.net.gz: hg19-referenced recip.best net to panTro5. - hg19.panTro5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from hg19 to panTro5 through the recip.best net. - panTro5.hg19.rbest.net.gz: panTro5-referenced recip.best net. - panTro5.hg19.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.hg19.panTro5.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - hg19.panTro5.rbest.net.gz 2017-05-08 09:36 19M panTro5.hg19.rbest.net.gz 2017-05-08 09:35 19M panTro5.hg19.rbest.chain.gz 2017-05-08 09:35 12M hg19.panTro5.rbest.chain.gz 2017-05-08 09:35 12M md5sum.txt 2017-05-08 09:36 244 axtRBestNet/ 2017-05-08 12:46 -