This directory contains reciprocal-best netted chains for susScr11-GCA_002844635.1.
- susScr11.GCA_002844635.1.rbest.net.gz: susScr11-referenced recip.best net to GCA_002844635.1.
- susScr11.GCA_002844635.1.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from susScr11 to GCA_002844635.1 through the recip.best net.
- GCA_002844635.1.susScr11.rbest.net.gz: GCA_002844635.1-referenced recip.best net.
- GCA_002844635.1.susScr11.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/susScr11.GCA_002844635.1.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
GCA_002844635.1.susScr11.rbest.net.gz 2021-04-21 19:25 11M
GCA_002844635.1.susScr11.rbest.chain.gz 2021-04-21 19:25 7.4M
susScr11.GCA_002844635.1.rbest.chain.gz 2021-04-21 19:26 7.4M
susScr11.GCA_002844635.1.rbest.net.gz 2021-04-21 19:26 15M
md5sum.txt 2021-04-21 19:26 292
axtRBestNet/ 2021-04-26 15:22 -