This directory contains reciprocal-best netted chains for strPur2-ci3.
- strPur2.ci3.rbest.net.gz: strPur2-referenced recip.best net to ci3.
- strPur2.ci3.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from strPur2 to ci3 through the recip.best net.
- ci3.strPur2.rbest.net.gz: ci3-referenced recip.best net.
- ci3.strPur2.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/strPur2.ci3.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-03-22 10:24 -
ci3.strPur2.rbest.chain.gz 2017-03-22 10:16 582K
ci3.strPur2.rbest.net.gz 2017-03-22 10:16 809K
md5sum.txt 2017-03-22 10:16 240
strPur2.ci3.rbest.chain.gz 2017-03-22 10:16 583K
strPur2.ci3.rbest.net.gz 2017-03-22 10:16 836K