This directory contains a dump of the UCSC genome annotation
database for the Saccharomyces cerevisiae sequence dated 1 Oct. 2003
in the Saccharomyces Genome Database (http://www.yeastgenome.org/).
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=sacCer1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then
go to the directory goldenPath/sacCer1/database. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the annotations in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory -
all_est.sql 2016-05-15 11:28 2.1K
all_est.txt.gz 2016-05-15 11:28 961K
all_mrna.sql 2020-05-09 02:10 2.1K
all_mrna.txt.gz 2020-05-09 02:10 44K
augustusGene.sql 2015-07-26 17:28 1.9K
augustusGene.txt.gz 2015-07-26 17:28 107K
bigFiles.sql 2024-11-17 03:38 1.4K
bigFiles.txt.gz 2024-11-17 03:38 33
blastHg16KG.sql 2013-10-01 12:48 1.3K
blastHg16KG.txt.gz 2004-09-28 17:12 270K
choExpDistance.sql 2013-10-01 12:48 403
choExpDistance.txt.gz 2004-01-14 17:03 34M
chr1_est.sql 2016-05-15 11:28 2.1K
chr1_est.txt.gz 2016-05-15 11:28 11K
chr1_intronEst.sql 2016-05-15 11:28 2.1K
chr1_intronEst.txt.gz 2016-05-15 11:28 1.1K
chr1_mrna.sql 2020-05-09 02:10 2.1K
chr1_mrna.txt.gz 2020-05-09 02:10 1.0K
chr2_est.sql 2016-05-15 11:29 2.1K
chr2_est.txt.gz 2016-05-15 11:29 71K
chr2_intronEst.sql 2016-05-15 11:29 2.1K
chr2_intronEst.txt.gz 2016-05-15 11:29 9.3K
chr2_mrna.sql 2020-05-09 02:10 2.1K
chr2_mrna.txt.gz 2020-05-09 02:10 3.2K
chr3_est.sql 2016-05-15 11:28 2.1K
chr3_est.txt.gz 2016-05-15 11:28 32K
chr3_intronEst.sql 2016-05-15 11:28 2.1K
chr3_intronEst.txt.gz 2016-05-15 11:28 1.5K
chr3_mrna.sql 2020-05-09 02:10 2.1K
chr3_mrna.txt.gz 2020-05-09 02:10 1.1K
chr4_est.sql 2016-05-15 11:28 2.1K
chr4_est.txt.gz 2016-05-15 11:28 149K
chr4_intronEst.sql 2016-05-15 11:28 2.1K
chr4_intronEst.txt.gz 2016-05-15 11:28 12K
chr4_mrna.sql 2020-05-09 02:10 2.1K
chr4_mrna.txt.gz 2020-05-09 02:10 5.5K
chr5_est.sql 2016-05-15 11:28 2.1K
chr5_est.txt.gz 2016-05-15 11:28 53K
chr5_intronEst.sql 2016-05-15 11:28 2.1K
chr5_intronEst.txt.gz 2016-05-15 11:28 3.3K
chr5_mrna.sql 2020-05-09 02:10 2.1K
chr5_mrna.txt.gz 2020-05-09 02:10 2.6K
chr6_est.sql 2016-05-15 11:28 2.1K
chr6_est.txt.gz 2016-05-15 11:28 30K
chr6_intronEst.sql 2016-05-15 11:28 2.1K
chr6_intronEst.txt.gz 2016-05-15 11:28 2.9K
chr6_mrna.sql 2020-05-09 02:10 2.1K
chr6_mrna.txt.gz 2020-05-09 02:10 1.1K
chr7_est.sql 2016-05-15 11:29 2.1K
chr7_est.txt.gz 2016-05-15 11:29 83K
chr7_intronEst.sql 2016-05-15 11:29 2.1K
chr7_intronEst.txt.gz 2016-05-15 11:29 8.3K
chr7_mrna.sql 2020-05-09 02:10 2.1K
chr7_mrna.txt.gz 2020-05-09 02:10 4.4K
chr8_est.sql 2016-05-15 11:28 2.1K
chr8_est.txt.gz 2016-05-15 11:28 32K
chr8_intronEst.sql 2016-05-15 11:28 2.1K
chr8_intronEst.txt.gz 2016-05-15 11:28 3.6K
chr8_mrna.sql 2020-05-09 02:10 2.1K
chr8_mrna.txt.gz 2020-05-09 02:10 1.8K
chr9_est.sql 2016-05-15 11:28 2.1K
chr9_est.txt.gz 2016-05-15 11:28 24K
chr9_intronEst.sql 2016-05-15 11:28 2.1K
chr9_intronEst.txt.gz 2016-05-15 11:28 2.6K
chr9_mrna.sql 2020-05-09 02:10 2.1K
chr9_mrna.txt.gz 2020-05-09 02:10 1.5K
chr10_est.sql 2016-05-15 11:28 2.1K
chr10_est.txt.gz 2016-05-15 11:28 50K
chr10_intronEst.sql 2016-05-15 11:28 2.1K
chr10_intronEst.txt.gz 2016-05-15 11:28 3.2K
chr10_mrna.sql 2020-05-09 02:09 2.1K
chr10_mrna.txt.gz 2020-05-09 02:09 3.4K
chr11_est.sql 2016-05-15 11:28 2.1K
chr11_est.txt.gz 2016-05-15 11:28 49K
chr11_intronEst.sql 2016-05-15 11:28 2.1K
chr11_intronEst.txt.gz 2016-05-15 11:28 3.2K
chr11_mrna.sql 2020-05-09 02:09 2.1K
chr11_mrna.txt.gz 2020-05-09 02:09 2.5K
chr12_est.sql 2016-05-15 11:28 2.1K
chr12_est.txt.gz 2016-05-15 11:28 81K
chr12_intronEst.sql 2016-05-15 11:28 2.1K
chr12_intronEst.txt.gz 2016-05-15 11:28 5.7K
chr12_mrna.sql 2020-05-09 02:09 2.1K
chr12_mrna.txt.gz 2020-05-09 02:09 4.6K
chr13_est.sql 2016-05-15 11:28 2.1K
chr13_est.txt.gz 2016-05-15 11:28 70K
chr13_intronEst.sql 2016-05-15 11:28 2.1K
chr13_intronEst.txt.gz 2016-05-15 11:28 5.5K
chr13_mrna.sql 2020-05-09 02:09 2.1K
chr13_mrna.txt.gz 2020-05-09 02:09 3.4K
chr14_est.sql 2016-05-15 11:28 2.1K
chr14_est.txt.gz 2016-05-15 11:28 46K
chr14_intronEst.sql 2016-05-15 11:28 2.1K
chr14_intronEst.txt.gz 2016-05-15 11:28 2.4K
chr14_mrna.sql 2020-05-09 02:09 2.1K
chr14_mrna.txt.gz 2020-05-09 02:09 2.8K
chr15_est.sql 2016-05-15 11:28 2.1K
chr15_est.txt.gz 2016-05-15 11:29 101K
chr15_intronEst.sql 2016-05-15 11:29 2.1K
chr15_intronEst.txt.gz 2016-05-15 11:29 5.3K
chr15_mrna.sql 2020-05-09 02:09 2.1K
chr15_mrna.txt.gz 2020-05-09 02:09 3.2K
chr16_est.sql 2016-05-15 11:28 2.1K
chr16_est.txt.gz 2016-05-15 11:28 84K
chr16_intronEst.sql 2016-05-15 11:28 2.1K
chr16_intronEst.txt.gz 2016-05-15 11:28 6.6K
chr16_mrna.sql 2020-05-09 02:10 2.1K
chr16_mrna.txt.gz 2020-05-09 02:10 3.1K
chrM_est.sql 2016-05-15 11:28 2.1K
chrM_est.txt.gz 2016-05-15 11:28 33
chrM_intronEst.sql 2016-05-15 11:29 2.1K
chrM_intronEst.txt.gz 2016-05-15 11:29 39
chrM_mrna.sql 2020-05-09 02:10 2.1K
chrM_mrna.txt.gz 2020-05-09 02:10 860
chromInfo.sql 2013-10-01 12:48 405
chromInfo.txt.gz 2004-01-14 17:03 218
dmBlastTab.sql 2008-11-03 03:18 1.6K
dmBlastTab.txt.gz 2008-11-03 03:18 52K
drBlastTab.sql 2013-10-01 12:48 811
drBlastTab.txt.gz 2004-01-14 17:03 83K
ensGene.sql 2008-04-19 03:11 1.9K
ensGene.txt.gz 2008-04-19 03:11 150K
ensGtp.sql 2008-04-19 03:11 1.3K
ensGtp.txt.gz 2008-04-19 03:11 29K
ensPep.sql 2008-04-19 03:11 1.1K
ensPep.txt.gz 2008-04-19 03:11 1.7M
esRegGeneToModule.sql 2013-10-01 12:48 381
esRegGeneToModule.txt.gz 2004-09-28 17:12 9.1K
esRegGeneToMotif.sql 2013-10-01 12:48 656
esRegGeneToMotif.txt.gz 2004-09-28 17:12 37K
esRegMotif.sql 2013-10-01 12:48 452
esRegMotif.txt.gz 2004-09-28 17:12 17K
esRegUpstreamRegion.sql 2013-10-01 12:48 598
esRegUpstreamRegion.txt.gz 2004-09-28 17:12 19K
estOrientInfo.sql 2016-05-15 11:29 1.8K
estOrientInfo.txt.gz 2016-05-15 11:29 303K
extFile.sql 2013-10-01 12:48 445
extFile.txt.gz 2004-09-13 06:09 1.5K
gbLoaded.sql 2020-09-01 20:04 1.6K
gbLoaded.txt.gz 2020-09-01 20:04 43K
gcPercent.sql 2013-10-01 12:48 555
gcPercent.txt.gz 2004-01-14 17:04 2.8K
growthCondition.sql 2011-09-12 00:03 1.3K
growthCondition.txt.gz 2011-09-12 00:03 685
grp.sql 2014-03-02 04:14 1.4K
grp.txt.gz 2014-03-02 04:14 218
hgBlastTab.sql 2009-08-19 15:45 1.8K
hgBlastTab.txt.gz 2009-08-19 15:45 59K
hgFindSpec.sql 2023-03-28 13:53 1.8K
hgFindSpec.txt.gz 2023-03-28 13:53 894
history.sql 2013-10-01 12:48 537
history.txt.gz 2004-09-13 06:09 584
mmBlastTab.sql 2007-10-20 17:54 1.6K
mmBlastTab.txt.gz 2007-10-20 17:54 58K
mrnaOrientInfo.sql 2020-05-09 02:10 1.8K
mrnaOrientInfo.txt.gz 2020-05-09 02:10 18K
multizYeast.sql 2013-10-01 12:48 671
multizYeast.txt.gz 2004-01-14 17:04 501K
oreganno.sql 2016-05-15 11:29 1.5K
oreganno.txt.gz 2016-05-15 11:29 83K
oregannoAttr.sql 2016-05-15 11:29 1.4K
oregannoAttr.txt.gz 2016-05-15 11:29 118K
oregannoLink.sql 2016-05-15 11:29 1.4K
oregannoLink.txt.gz 2016-05-15 11:29 83K
phastCons.sql 2013-10-01 12:48 895
phastCons.txt.gz 2004-09-30 17:31 305K
phastConsElements.sql 2013-10-01 12:48 655
phastConsElements.txt.gz 2004-09-30 17:31 380K
protHomolog.sql 2013-10-01 12:48 621
protHomolog.txt.gz 2005-01-12 09:45 3.2M
rnBlastTab.sql 2006-07-22 13:14 1.6K
rnBlastTab.txt.gz 2006-07-22 13:14 68K
sacBay_pwMaf.sql 2013-10-01 12:48 662
sacBay_pwMaf.txt.gz 2004-09-13 06:09 46K
sacCas_pwMaf.sql 2013-10-01 12:48 662
sacCas_pwMaf.txt.gz 2004-09-13 06:09 77K
sacKlu_pwMaf.sql 2013-10-01 12:48 662
sacKlu_pwMaf.txt.gz 2004-09-13 06:09 112K
sacKud_pwMaf.sql 2013-10-01 12:48 662
sacKud_pwMaf.txt.gz 2004-09-13 06:09 63K
sacMik_pwMaf.sql 2013-10-01 12:48 662
sacMik_pwMaf.txt.gz 2004-09-13 06:09 56K
sacPar_pwMaf.sql 2013-10-01 12:48 662
sacPar_pwMaf.txt.gz 2004-09-13 06:09 34K
samSubdir.sql 2013-10-01 12:48 345
samSubdir.txt.gz 2005-01-12 09:45 14K
sgdAbundance.sql 2013-10-01 12:48 394
sgdAbundance.txt.gz 2004-01-14 17:04 19K
sgdBlastTab.sql 2013-10-01 12:48 813
sgdBlastTab.txt.gz 2004-01-14 17:04 1.0M
sgdCanonical.sql 2013-10-01 12:48 616
sgdCanonical.txt.gz 2004-01-14 17:04 89K
sgdClone.sql 2013-10-01 12:48 571
sgdClone.txt.gz 2004-01-14 17:04 16K
sgdDescription.sql 2013-10-01 12:48 391
sgdDescription.txt.gz 2004-01-14 17:04 139K
sgdGene.sql 2013-10-01 12:48 833
sgdGene.txt.gz 2004-01-14 17:04 112K
sgdIsoforms.sql 2013-10-01 12:48 409
sgdIsoforms.txt.gz 2004-01-14 17:04 27K
sgdLocalization.sql 2013-10-01 12:48 387
sgdLocalization.txt.gz 2004-01-14 17:04 19K
sgdOther.sql 2013-10-01 12:48 594
sgdOther.txt.gz 2004-01-14 17:04 24K
sgdOtherDescription.sql 2013-10-01 12:48 401
sgdOtherDescription.txt.gz 2004-01-14 17:04 13K
sgdPep.sql 2013-10-01 12:48 331
sgdPep.txt.gz 2004-01-14 17:04 1.6M
sgdToName.sql 2007-03-23 10:42 1.2K
sgdToName.txt.gz 2007-03-23 10:42 36K
sgdToPfam.sql 2013-10-01 12:48 375
sgdToPfam.txt.gz 2004-04-17 05:21 22K
sgdToSgd.sql 2013-10-01 12:48 374
sgdToSgd.txt.gz 2004-01-14 17:04 28K
sgdToSwissProt.sql 2013-10-01 12:48 379
sgdToSwissProt.txt.gz 2004-01-14 17:04 32K
simpleRepeat.sql 2013-10-01 12:48 1.1K
simpleRepeat.txt.gz 2004-01-14 17:04 33K
tableDescriptions.sql 2024-11-16 02:03 1.5K
tableDescriptions.txt.gz 2024-11-16 02:03 6.9K
tableList.sql 2024-11-17 03:38 1.6K
tableList.txt.gz 2024-11-17 03:38 6.3K
trackDb.sql 2023-03-28 13:53 2.1K
trackDb.txt.gz 2023-03-28 13:53 21K
transRegCode.sql 2013-10-01 12:48 663
transRegCode.txt.gz 2004-12-22 21:39 1.4M
transRegCodeCondition.sql 2013-11-10 22:13 1.5K
transRegCodeCondition.txt.gz 2013-11-10 22:13 1.2K
transRegCodeMotif.sql 2013-10-01 12:48 471
transRegCodeMotif.txt.gz 2004-12-22 21:39 6.3K
transRegCodeProbe.sql 2013-10-01 12:48 638
transRegCodeProbe.txt.gz 2004-12-22 21:39 138K
uwFootprintsMappability.sql 2009-04-26 11:34 1.3K
uwFootprintsMappability.txt.gz 2009-04-26 11:34 99K
uwFootprintsPrints.sql 2009-04-26 11:35 1.4K
uwFootprintsPrints.txt.gz 2009-04-26 11:35 52K
uwFootprintsTagCounts.sql 2009-04-26 11:34 1.8K
uwFootprintsTagCounts.txt.gz 2009-04-26 11:35 34M
xenoRefFlat.sql 2020-09-01 20:04 1.7K
xenoRefFlat.txt.gz 2020-09-01 20:04 960K
xenoRefGene.sql 2020-09-01 20:04 2.0K
xenoRefGene.txt.gz 2020-09-01 20:04 1.1M
xenoRefSeqAli.sql 2020-09-01 20:04 2.1K
xenoRefSeqAli.txt.gz 2020-09-01 20:04 1.1M
yeastP2P.sql 2013-10-01 12:48 359
yeastP2P.txt.gz 2005-06-16 05:00 27M