This directory contains reciprocal-best netted chains for papAnu4-hg38.
- papAnu4.hg38.rbest.net.gz: papAnu4-referenced recip.best net to hg38.
- papAnu4.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from papAnu4 to hg38 through the recip.best net.
- hg38.papAnu4.rbest.net.gz: hg38-referenced recip.best net.
- hg38.papAnu4.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/papAnu4.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2019-05-23 10:17 -
hg38.papAnu4.rbest.chain.gz 2018-01-09 22:11 37M
hg38.papAnu4.rbest.net.gz 2018-01-09 22:10 63M
md5sum.txt 2018-01-09 22:12 244
papAnu4.hg38.rbest.chain.gz 2018-01-09 22:11 37M
papAnu4.hg38.rbest.net.gz 2018-01-09 22:12 60M