This directory contains reciprocal-best netted chains for panTro5-hg19.

 - panTro5.hg19.rbest.net.gz: panTro5-referenced recip.best net to hg19.
 - panTro5.hg19.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from panTro5 to hg19 through the recip.best net.

 - hg19.panTro5.rbest.net.gz: hg19-referenced recip.best net.
 - hg19.panTro5.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/panTro5.hg19.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2017-05-11 11:37    -   
      hg19.panTro5.rbest.chain.gz 2017-05-11 06:59   13M  
      hg19.panTro5.rbest.net.gz   2017-05-11 06:58   21M  
      md5sum.txt                  2017-05-11 06:59  244   
      panTro5.hg19.rbest.chain.gz 2017-05-11 06:59   13M  
      panTro5.hg19.rbest.net.gz   2017-05-11 06:59   21M