This directory contains reciprocal-best netted chains for panPan3-hg38.

 - panPan3.hg38.rbest.net.gz: panPan3-referenced recip.best net to hg38.
 - panPan3.hg38.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from panPan3 to hg38 through the recip.best net.

 - hg38.panPan3.rbest.net.gz: hg38-referenced recip.best net.
 - hg38.panPan3.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/panPan3.hg38.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2020-07-08 09:53    -   
      md5sum.txt                  2020-06-15 16:56  244   
      hg38.panPan3.rbest.chain.gz 2020-06-15 16:55   11M  
      panPan3.hg38.rbest.chain.gz 2020-06-15 16:55   11M  
      panPan3.hg38.rbest.net.gz   2020-06-15 16:56   17M  
      hg38.panPan3.rbest.net.gz   2020-06-15 16:55   18M