This directory contains reciprocal-best netted chains for oviAri4-mm10.
- oviAri4.mm10.rbest.net.gz: oviAri4-referenced recip.best net to mm10.
- oviAri4.mm10.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from oviAri4 to mm10 through the recip.best net.
- mm10.oviAri4.rbest.net.gz: mm10-referenced recip.best net.
- mm10.oviAri4.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/oviAri4.mm10.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2018-10-02 11:02 -
md5sum.txt 2018-04-27 11:49 244
mm10.oviAri4.rbest.chain.gz 2018-04-27 11:46 50M
mm10.oviAri4.rbest.net.gz 2018-04-27 11:45 77M
oviAri4.mm10.rbest.chain.gz 2018-04-27 11:47 50M
oviAri4.mm10.rbest.net.gz 2018-04-27 11:49 102M