This directory contains reciprocal-best netted chains for oviAri4-hg38.
- oviAri4.hg38.rbest.net.gz: oviAri4-referenced recip.best net to hg38.
- oviAri4.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from oviAri4 to hg38 through the recip.best net.
- hg38.oviAri4.rbest.net.gz: hg38-referenced recip.best net.
- hg38.oviAri4.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/oviAri4.hg38.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2018-10-02 11:01 -
hg38.oviAri4.rbest.chain.gz 2018-04-30 08:04 77M
hg38.oviAri4.rbest.net.gz 2018-04-30 08:02 144M
md5sum.txt 2018-04-30 08:07 244
oviAri4.hg38.rbest.chain.gz 2018-04-30 08:05 77M
oviAri4.hg38.rbest.net.gz 2018-04-30 08:07 126M