This directory contains reciprocal-best netted chains for neoSch1-hg38. - neoSch1.hg38.rbest.net.gz: neoSch1-referenced recip.best net to hg38. - neoSch1.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from neoSch1 to hg38 through the recip.best net. - hg38.neoSch1.rbest.net.gz: hg38-referenced recip.best net. - hg38.neoSch1.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/neoSch1.hg38.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2020-11-23 13:32 - hg38.neoSch1.rbest.chain.gz 2018-03-16 10:54 79M hg38.neoSch1.rbest.net.gz 2018-03-16 10:52 152M md5sum.txt 2018-03-16 11:01 244 neoSch1.hg38.rbest.chain.gz 2018-03-16 10:55 79M neoSch1.hg38.rbest.net.gz 2018-03-16 11:01 132M