This directory contains the Feb. 2002 freeze of the mouse
genome from the Mouse Genome Sequencing Consortium. This 
assembly was produced at the Whitehead Institute using their 
Arachne software. 

chromAgp.zip - Description of how the working draft was generated from
    fragments at a chromosome layout level. 

chromFa.zip - The working draft sequence chromosome in one file per 
    chromosome. Repeats from RepeatMasker and Tandem Repeats Finder
    (with period of 12 or less) are in lower case while non-repeating
    sequence is in upper case.

chromFaMasked.zip - The working draft sequence chromosome in one file
    per chromosome.  Repeats are masked by capital N's and 
    non-repeating sequence is shown in upper case.

chromOut.zip - RepeatMasker .out file for chromosomes.  These were done
    with RepeatMasker at the -s sensitive setting.

contigAgp.zip - Description of how the working draft was generated from
    fragments at a contig layout level. 

contigFa.zip - The working draft sequence contig in one file per 
    contig. Repeats from RepeatMasker and Tandem Repeats Finder 
    (with period of 12 or less) are in lower case while non-repeating 
    sequence is in upper case.

contigFaMasked.zip - The working draft sequence contig in one file
    per contig.  Repeats are masked by capital N's and
    non-repeating sequence is shown in upper case.

contigOut.zip - RepeatMasker .out file for contigs.  These were done
    with RepeatMasker at the -s sensitive setting.

      Name                    Last modified      Size  Description
Parent Directory - chromAgp.zip 2002-10-16 12:00 5.4M chromFa.zip 2002-10-16 12:52 765M chromFaMasked.zip 2002-10-16 13:23 475M chromOut.zip 2002-10-16 12:04 141M contigAgp.zip 2002-10-16 13:24 5.5M contigFa.zip 2002-10-16 14:17 780M contigFaMasked.zip 2002-08-01 13:26 475M contigOut.zip 2002-10-16 13:28 140M database.zip 2002-10-06 06:55 653M liftAll.zip 2002-10-15 16:01 3.7K mrna.zip 2003-01-23 12:45 12M