This directory contains reciprocal-best netted chains for mm10-papAnu4.

 - mm10.papAnu4.rbest.net.gz: mm10-referenced recip.best net to papAnu4.
 - mm10.papAnu4.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from mm10 to papAnu4 through the recip.best net.

 - papAnu4.mm10.rbest.net.gz: papAnu4-referenced recip.best net.
 - papAnu4.mm10.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.mm10.papAnu4.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
Parent Directory - axtRBestNet/ 2018-01-09 20:12 - md5sum.txt 2018-01-09 10:48 244 mm10.papAnu4.rbest.chain.gz 2018-01-09 10:46 64M mm10.papAnu4.rbest.net.gz 2018-01-09 10:47 91M papAnu4.mm10.rbest.chain.gz 2018-01-09 10:45 64M papAnu4.mm10.rbest.net.gz 2018-01-09 10:43 139M