This directory contains reciprocal-best netted chains for mm10-hg38.
- mm10.hg38.rbest.net.gz: mm10-referenced recip.best net to hg38.
- mm10.hg38.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from mm10 to hg38 through the recip.best net.
- hg38.mm10.rbest.net.gz: hg38-referenced recip.best net.
- hg38.mm10.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.mm10.hg38.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2015-04-10 14:47 -
hg38.mm10.rbest.chain.gz 2015-04-10 14:19 65M
hg38.mm10.rbest.net.gz 2015-04-10 14:17 141M
md5sum.txt 2015-04-10 14:21 232
mm10.hg38.rbest.chain.gz 2015-04-10 14:19 65M
mm10.hg38.rbest.net.gz 2015-04-10 14:21 91M