Chromosome 3

Chromosome 3 - Clone Overlaps

Description of this page

Line color code:

White: overlap with immediately succeeding clone
Green: overlap with clone in same contig
Pink: overlap with clone in same chromosome, different contig
Red: overlap with clone on different chromosome
Yellow: overlap with clone not used in assembly

NT_037561	NT_005927	NT_028123	NT_006044	NT_037562	NT_022517	NT_005762	NT_037564
NT_005646	NT_034532	NT_005580	NT_034533	NT_005498	NT_037565	NT_005825	NT_022567
NT_037566	NT_034535	NT_022439	NT_006014	NT_033032	NT_037567	NT_005986	NT_033038
NT_034652	NT_037568	NT_005787	NT_005607	NT_037569	NT_005999	NT_022473	NT_022423
NT_037570	NT_037571	NT_005526	NT_037572	NT_022446	NT_005882	NT_005684	NT_022459
NT_006031	NT_022419	NT_022642	NT_022435	NT_022497	NT_037573	NT_022475	NT_033050
NT_033041	NT_037574	NT_005863	NT_022454	NT_037575	NT_025670	NT_022434	NT_005795
NT_015150	NT_022445	NT_005994	NT_005513	NT_037577	NT_037578	NT_005543	NT_005588
NT_037579	NT_037580	NT_022513	NT_033014	NT_006025	NT_005823	NT_037581	NT_022393
NT_005824	NT_037582	NT_037583	NT_034552	NT_025663	NT_034554	NT_005567	NT_025664
NT_005832	NT_019358	NT_005775	NT_005612	NT_022463	NT_022594	NT_022421	NT_022518
NT_005638	NT_034563	NT_025667	NT_022509	NT_034565	NT_022396	NT_022676	NT_029253
NT_037584	NT_005962	NT_033013	NT_029928	NT_037585	NT_005535	NT_022508	NT_037586

NT_037561

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037561	AF328455	1	3

NT_005927

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005927	AC066595	10601	3	chr3	NT_005927	AC026187	182720	3	58952	0	0	58952
S/G/Y/R/B/O	NT_005927	AC066595	10601	3			AC026178	44699288		15450	0	0	15450
S/G/Y/R/B/O	NT_005927	AC066595	10601	3			AC026178	44699288		15450	0	0	15450
S/G/Y/R/B/O	NT_005927	AC066595	10601	3			AC034248	182720		54006	0	1566	55572
S/G/Y/R/B/O	NT_005927	AC066595	10601	3			AC034248	182720		54006	0	1566	55572
S/G/Y/R/B/O	NT_005927	AC066595	10601	3			AC055763	182720		55262	0	1043	56305
S/G/Y/R/B/O	NT_005927	AC066595	10601	3			AC055763	182720		55262	0	1043	56305
S/G/Y/R/B/O	NT_005927	AC026187	182720	3	chr3	NT_005927	AC087091	307852	3	21608	0	0	21608
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC026171	439249		32670	1822	49891	84383
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC026171	439249		32670	1822	49891	84383
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC026178	439249		94964	4104	6792	105860
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC026178	439249		94964	4104	6792	105860
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC034189	439249		28298	14002	21830	64130
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC034189	439249		28298	14002	21830	64130
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC034248	439249		31710	0	0	31710
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC034248	439249		31710	0	0	31710
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC055763	439249		73008	0	24508	97516
S/G/Y/R/B/O	NT_005927	AC026187	182720	3			AC055763	439249		73008	0	24508	97516
S/G/Y/R/B/O	NT_005927	AC087091	307852	3	chr3	NT_005927	AC011609	439249	3	141112	0	0	141112
S/G/Y/R/B/O	NT_005927	AC087091	307852	3			AC026178	439249		25897	1510	4731	32138
S/G/Y/R/B/O	NT_005927	AC087091	307852	3			AC034189	182720		26534	4340	6150	37024
S/G/Y/R/B/O	NT_005927	AC011609	439249	3	chr3	NT_005927	AC087428	464499	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC011609	439249	3			AC021997	182720		62432	0	0	62432
S/G/Y/R/B/O	NT_005927	AC011609	439249	3			AC026178	182720		19663	0	2224	21887
S/G/Y/R/B/O	NT_005927	AC011609	439249	3			AC079214	182720		141110	0	0	141110
S/G/Y/R/B/O	NT_005927	AC087428	464499	3	chr3	NT_005927	AC087431	572808	3	31744	0	0	31744
S/G/Y/R/B/O	NT_005927	AC087428	464499	3			AC023353	307852		42923	5834	9198	57955
S/G/Y/R/B/O	NT_005927	AC087431	572808	3	chr3	NT_005927	AC090044	737723	3	0	0	5009	5009
S/G/Y/R/B/O	NT_005927	AC087431	572808	3			AC023353	572808		81899	2303	9574	93776
S/G/Y/R/B/O	NT_005927	AC090044	737723	3	chr3	NT_005927	AC087430	922500	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC090044	737723	3			AC073051	737723		68013	4710	12495	85218
S/G/Y/R/B/O	NT_005927	AC090044	737723	3			AC087429	737723		24194	0	0	24194
S/G/Y/R/B/O	NT_005927	AC087430	922500	3	chr3	NT_005927	AC027123	1072012	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC027123	1072012	3	chr3	NT_005927	AC034192	1220221	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC027123	1072012	3			AC024377	572808		94778	9363	5170	109311
S/G/Y/R/B/O	NT_005927	AC027123	1072012	3			AC026190	572808		73219	0	6511	79730
S/G/Y/R/B/O	NT_005927	AC027123	1072012	3			AC034196	572808		13398	7524	7301	28223
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3	chr3	NT_005927	AC026214	1384541	3	32119	0	0	32119
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC018496	572808		75111	0	0	75111
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC018496	572808		75111	0	0	75111
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC018833	572808		25917	0	0	25917
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC018833	572808		25917	0	0	25917
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC022381	572808		22878	3501	35186	61565
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC022381	572808		22878	3501	35186	61565
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC024377	572808		27599	0	388	27987
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC024377	572808		27599	0	388	27987
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC026190	572808		33607	4843	12655	51105
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC026190	572808		33607	4843	12655	51105
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC026193	572808		27327	17757	47629	92713
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC026193	572808		27327	17757	47629	92713
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC026206	572808		10080	0	77171	87251
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC026206	572808		10080	0	77171	87251
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC034196	1384541		48610	1589	27174	77373
S/G/Y/R/B/O	NT_005927	AC034192	1220221	3			AC034196	1384541		48610	1589	27174	77373
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3	chr3	NT_005927	AC090043	1527039	3	0	2100	0	2100
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC022381	1384541		74180	0	0	74180
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC022381	1384541		74180	0	0	74180
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC022918	1384541		69790	0	0	69790
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC022918	1384541		69790	0	0	69790
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC026182	1384541		77027	0	0	77027
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC026182	1384541		77027	0	0	77027
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC026193	1384541		10247	1644	4375	16266
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC026193	1384541		10247	1644	4375	16266
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC026206	1384541		49945	0	0	49945
S/G/Y/R/B/O	NT_005927	AC026214	1384541	3			AC026206	1384541		49945	0	0	49945
S/G/Y/R/B/O	NT_005927	AC090043	1527039	3	chr3	NT_005927	AC090042	1698789	3	0	0	22958	22958
S/G/Y/R/B/O	NT_005927	AC090043	1527039	3			AC022918	1527039		58761	2036	29376	90173
S/G/Y/R/B/O	NT_005927	AC090043	1527039	3			AC022918	1527039		58761	2036	29376	90173
S/G/Y/R/B/O	NT_005927	AC090043	1527039	3			AC026182	1527039		92080	0	0	92080
S/G/Y/R/B/O	NT_005927	AC090043	1527039	3			AC026182	1527039		92080	0	0	92080
S/G/Y/R/B/O	NT_005927	AC090043	1527039	3			AC068074	1384541		56806	1943	19575	78324
S/G/Y/R/B/O	NT_005927	AC090043	1527039	3			AC068074	1384541		56806	1943	19575	78324
S/G/Y/R/B/O	NT_005927	AC090042	1698789	3	chr3	NT_005927	AC018814	1842910	3	18716	0	0	18716
S/G/Y/R/B/O	NT_005927	AC018814	1842910	3	chr3	NT_005927	AC087432	1990280	3	63228	0	0	63228
S/G/Y/R/B/O	NT_005927	AC018814	1842910	3			AC018497	1527039		69413	0	0	69413
S/G/Y/R/B/O	NT_005927	AC018814	1842910	3			AC018497	1527039		69413	0	0	69413
S/G/Y/R/B/O	NT_005927	AC018814	1842910	3			AC020753	1527039		67509	0	0	67509
S/G/Y/R/B/O	NT_005927	AC018814	1842910	3			AC020753	1527039		67509	0	0	67509
S/G/Y/R/B/O	NT_005927	AC018814	1842910	3			AC024216	1527039		56599	9681	58366	124646
S/G/Y/R/B/O	NT_005927	AC018814	1842910	3			AC024216	1527039		56599	9681	58366	124646
S/G/Y/R/B/O	NT_005927	AC087432	1990280	3	chr3	NT_005927	AC087427	2079289	3	92983	0	0	92983
S/G/Y/R/B/O	NT_005927	AC087432	1990280	3			AC020753	1842910		26811	0	0	26811
S/G/Y/R/B/O	NT_005927	AC087432	1990280	3			AC024216	1842910		23857	3070	26793	53720
S/G/Y/R/B/O	NT_005927	AC087427	2079289	3	chr3	NT_005927	AC024057	2158188	3	12646	0	0	12646
S/G/Y/R/B/O	NT_005927	AC087427	2079289	3			AC087083	2158188		78784	0	0	78784
S/G/Y/R/B/O	NT_005927	AC024057	2158188	3	chr3	NT_005927	AC026882	2331511	3	59008	0	0	59008
S/G/Y/R/B/O	NT_005927	AC024057	2158188	3			AC016963	1990280		84230	1469	4699	90398
S/G/Y/R/B/O	NT_005927	AC024057	2158188	3			AC026215	1990280		37062	0	17266	54328
S/G/Y/R/B/O	NT_005927	AC024057	2158188	3			AC069522	2331511		101982	2053	36170	140205
S/G/Y/R/B/O	NT_005927	AC024057	2158188	3			AC087083	2331511		110159	0	0	110159
S/G/Y/R/B/O	NT_005927	AC026882	2331511	3	chr3	NT_005927	AC022008	2434650	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC026882	2331511	3			AC016963	2079289		39279	0	7039	46318
S/G/Y/R/B/O	NT_005927	AC026882	2331511	3			AC018498	2079289		12165	0	0	12165
S/G/Y/R/B/O	NT_005927	AC026882	2331511	3			AC026215	2158188		64003	0	74169	138172
S/G/Y/R/B/O	NT_005927	AC026882	2331511	3			AC069522	2158188		51536	0	11942	63478
S/G/Y/R/B/O	NT_005927	AC022008	2434650	3	chr3	NT_005927	AC018842	2583644	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC022008	2434650	3			AC022386	2158188		47460	0	35812	83272
S/G/Y/R/B/O	NT_005927	AC018842	2583644	3	chr3	NT_005927	AC066608	2686955	3	0	0	50671	50671
S/G/Y/R/B/O	NT_005927	AC018842	2583644	3			AC022386	2158188		83303	0	0	83303
S/G/Y/R/B/O	NT_005927	AC018842	2583644	3			AC022386	2158188		83303	0	0	83303
S/G/Y/R/B/O	NT_005927	AC066608	2686955	3	chr3	NT_005927	AC087094	2827862	3	58639	0	0	58639
S/G/Y/R/B/O	NT_005927	AC087094	2827862	3	chr3	NT_005927	AC022002	2939985	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC087094	2827862	3			AC026198	2827862		38959	0	1819	40778
S/G/Y/R/B/O	NT_005927	AC022002	2939985	3	chr3	NT_005927	AC024060	3082143	3	17022	0	0	17022
S/G/Y/R/B/O	NT_005927	AC022002	2939985	3			AC007174	2686955		125833	2594	0	128427
S/G/Y/R/B/O	NT_005927	AC022002	2939985	3			AC018812	2686955		64124	0	0	64124
S/G/Y/R/B/O	NT_005927	AC022002	2939985	3			AC020752	2686955		98619	0	0	98619
S/G/Y/R/B/O	NT_005927	AC022002	2939985	3			AC026169	3082143		77709	3119	6577	87405
S/G/Y/R/B/O	NT_005927	AC022002	2939985	3			AC026175	3082143		115277	1596	13898	130771
S/G/Y/R/B/O	NT_005927	AC022002	2939985	3			AC026198	3082143		40671	0	98552	139223
S/G/Y/R/B/O	NT_005927	AC024060	3082143	3	chr3	NT_005927	AC068314	3239394	3	111943	0	0	111943
S/G/Y/R/B/O	NT_005927	AC024060	3082143	3			AC020751	3082143		118488	0	0	118488
S/G/Y/R/B/O	NT_005927	AC024060	3082143	3			AC023812	2939985		140350	0	0	140350
S/G/Y/R/B/O	NT_005927	AC024060	3082143	3			AC026169	2939985		41386	1578	10615	53579
S/G/Y/R/B/O	NT_005927	AC024060	3082143	3			AC046132	2939985		81954	0	51468	133422
S/G/Y/R/B/O	NT_005927	AC068314	3239394	3	chr3	NT_005927	AC026188	3307155	3	67745	0	0	67745
S/G/Y/R/B/O	NT_005927	AC068314	3239394	3			AC020751	3239394		164085	0	0	164085
S/G/Y/R/B/O	NT_005927	AC068314	3239394	3			AC023812	3239394		142390	0	0	142390
S/G/Y/R/B/O	NT_005927	AC068314	3239394	3			AC046132	3307155		49924	0	43301	93225
S/G/Y/R/B/O	NT_005927	AC026188	3307155	3	chr3	NT_005927	AC034195	3417112	3	84235	0	0	84235
S/G/Y/R/B/O	NT_005927	AC026188	3307155	3			AC020751	3307155		52045	0	0	52045
S/G/Y/R/B/O	NT_005927	AC026188	3307155	3			AC023478	3307155		62307	0	0	62307
S/G/Y/R/B/O	NT_005927	AC026188	3307155	3			AC023812	3307155		30432	0	0	30432
S/G/Y/R/B/O	NT_005927	AC034195	3417112	3	chr3	NT_005927	AC024158	3522717	3	12587	0	0	12587
S/G/Y/R/B/O	NT_005927	AC034195	3417112	3			AC018492	3239394		95828	0	0	95828
S/G/Y/R/B/O	NT_005927	AC034195	3417112	3			AC023478	3239394		167877	0	0	167877
S/G/Y/R/B/O	NT_005927	AC024158	3522717	3	chr3	NT_005927	AC023484	3672167	3	20423	0	0	20423
S/G/Y/R/B/O	NT_005927	AC024158	3522717	3			AC015545	3307155		20382	0	0	20382
S/G/Y/R/B/O	NT_005927	AC024158	3522717	3			AC018492	3307155		85822	0	0	85822
S/G/Y/R/B/O	NT_005927	AC024158	3522717	3			AC023478	3307155		12558	0	0	12558
S/G/Y/R/B/O	NT_005927	AC023484	3672167	3	chr3	NT_005927	AC024167	3844615	3	125107	0	0	125107
S/G/Y/R/B/O	NT_005927	AC023484	3672167	3			AC015545	3417112		115447	2634	0	118081
S/G/Y/R/B/O	NT_005927	AC023484	3672167	3			AC016146	3417112		61352	0	0	61352
S/G/Y/R/B/O	NT_005927	AC024167	3844615	3	chr3	NT_005927	AC023480	3908222	3	45571	0	0	45571
S/G/Y/R/B/O	NT_005927	AC024167	3844615	3			AC015545	3844615		53705	2634	0	56339
S/G/Y/R/B/O	NT_005927	AC024167	3844615	3			AC016146	3844615		124985	0	0	124985
S/G/Y/R/B/O	NT_005927	AC024167	3844615	3			AC018503	3844615		52900	0	0	52900
S/G/Y/R/B/O	NT_005927	AC023480	3908222	3	chr3	NT_005927	AC018822	4062453	3	70475	0	0	70475
S/G/Y/R/B/O	NT_005927	AC023480	3908222	3			AC016146	3672167		110913	0	0	110913
S/G/Y/R/B/O	NT_005927	AC023480	3908222	3			AC018503	3672167		183485	0	0	183485
S/G/Y/R/B/O	NT_005927	AC023480	3908222	3			AC066587	3844615		80676	0	0	80676
S/G/Y/R/B/O	NT_005927	AC023480	3908222	3			AC069264	3844615		42332	4052	1460	47844
S/G/Y/R/B/O	NT_005927	AC018822	4062453	3	chr3	NT_005927	AC023483	4181886	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC018822	4062453	3			AC018503	3844615		54376	0	0	54376
S/G/Y/R/B/O	NT_005927	AC018822	4062453	3			AC026189	3908222		102065	0	0	102065
S/G/Y/R/B/O	NT_005927	AC018822	4062453	3			AC066587	3908222		129030	0	0	129030
S/G/Y/R/B/O	NT_005927	AC018822	4062453	3			AC069264	3908222		68365	0	7906	76271
S/G/Y/R/B/O	NT_005927	AC023483	4181886	3	chr3	NT_005927	AC034191	4294841	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC023483	4181886	3			AC016092	3908222		75686	0	1276	76962
S/G/Y/R/B/O	NT_005927	AC023483	4181886	3			AC024636	3908222		38612	0	0	38612
S/G/Y/R/B/O	NT_005927	AC023483	4181886	3			AC024898	3908222		28197	0	0	28197
S/G/Y/R/B/O	NT_005927	AC034191	4294841	3	chr3	NT_005927	AC024168	4360226	3	18727	0	0	18727
S/G/Y/R/B/O	NT_005927	AC034191	4294841	3			AC013639	3908222		64480	1689	0	66169
S/G/Y/R/B/O	NT_005927	AC034191	4294841	3			AC016092	3908222		66205	0	1276	67481
S/G/Y/R/B/O	NT_005927	AC034191	4294841	3			AC024636	4360226		43142	9642	4655	57439
S/G/Y/R/B/O	NT_005927	AC034191	4294841	3			AC024898	4360226		51302	0	711	52013
S/G/Y/R/B/O	NT_005927	AC034191	4294841	3			AL512885	4360226		67083	0	0	67083
S/G/Y/R/B/O	NT_005927	AC024168	4360226	3	chr3	NT_005927	AC090944	4527765	3	72332	0	0	72332
S/G/Y/R/B/O	NT_005927	AC024168	4360226	3			AC013639	4360226		86951	1213	3601	91765
S/G/Y/R/B/O	NT_005927	AC024168	4360226	3			AC024636	4360226		22081	2969	4372	29422
S/G/Y/R/B/O	NT_005927	AC024168	4360226	3			AC024898	4360226		37346	1692	18342	57380
S/G/Y/R/B/O	NT_005927	AC024168	4360226	3			AL512885	4527765		116746	0	0	116746
S/G/Y/R/B/O	NT_005927	AC090944	4527765	3	chr3	NT_005927	AC069248	4601282	3	46066	0	0	46066
S/G/Y/R/B/O	NT_005927	AC069248	4601282	3	chr3	NT_005927	AC018816	4729079	3	0	1609	0	1609
S/G/Y/R/B/O	NT_005927	AC069248	4601282	3			AC015541	4601282		24019	0	0	24019
S/G/Y/R/B/O	NT_005927	AC069248	4601282	3			AC024157	4729079		78742	0	0	78742
S/G/Y/R/B/O	NT_005927	AC069248	4601282	3			AC026162	4729079		24010	0	0	24010
S/G/Y/R/B/O	NT_005927	AC018816	4729079	3	chr3	NT_005927	AC090955	4896095	3	14729	0	0	14729
S/G/Y/R/B/O	NT_005927	AC018816	4729079	3			AC015541	4527765		142098	0	0	142098
S/G/Y/R/B/O	NT_005927	AC018816	4729079	3			AC018501	4527765		141271	0	0	141271
S/G/Y/R/B/O	NT_005927	AC018816	4729079	3			AC024157	4527765		83366	0	0	83366
S/G/Y/R/B/O	NT_005927	AC018816	4729079	3			AC026162	4527765		142132	0	0	142132
S/G/Y/R/B/O	NT_005927	AC018816	4729079	3			AC127382	4896095		113689	0	0	113689
S/G/Y/R/B/O	NT_005927	AC090955	4896095	3	chr3	NT_005927	AC021999	5061018	3	97783	0	0	97783
S/G/Y/R/B/O	NT_005927	AC090955	4896095	3			AC011606	4896095		45169	2076	0	47245
S/G/Y/R/B/O	NT_005927	AC090955	4896095	3			AC018501	4896095		74178	0	0	74178
S/G/Y/R/B/O	NT_005927	AC090955	4896095	3			AC018821	4729079		22213	0	0	22213
S/G/Y/R/B/O	NT_005927	AC090955	4896095	3			AC020754	4729079		97740	0	0	97740
S/G/Y/R/B/O	NT_005927	AC090955	4896095	3			AC127382	5061018		80468	0	0	80468
S/G/Y/R/B/O	NT_005927	AC021999	5061018	3	chr3	NT_005927	AC026202	5145870	3	37059	0	0	37059
S/G/Y/R/B/O	NT_005927	AC021999	5061018	3			AC011606	5061018		46955	4404	0	51359
S/G/Y/R/B/O	NT_005927	AC021999	5061018	3			AC018821	5061018		77393	0	0	77393
S/G/Y/R/B/O	NT_005927	AC021999	5061018	3			AC020754	5061018		152992	0	0	152992
S/G/Y/R/B/O	NT_005927	AC021999	5061018	3			AC026164	5061018		31391	0	0	31391
S/G/Y/R/B/O	NT_005927	AC026202	5145870	3	chr3	NT_005927	AC090842	5313050	3	0	0	1084	1084
S/G/Y/R/B/O	NT_005927	AC026202	5145870	3			AC018458	4896095		79276	1972	0	81248
S/G/Y/R/B/O	NT_005927	AC026202	5145870	3			AC018821	4896095		113448	0	0	113448
S/G/Y/R/B/O	NT_005927	AC026202	5145870	3			AC020754	4896095		45517	0	0	45517
S/G/Y/R/B/O	NT_005927	AC090842	5313050	3	chr3	NT_005927	AC090940	5466809	3	0	0	21553	21553
S/G/Y/R/B/O	NT_005927	AC090842	5313050	3			AC069230	5145870		77766	13417	8311	99494
S/G/Y/R/B/O	NT_005927	AC090940	5466809	3	chr3	NT_005927	AC090938	5615280	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC090940	5466809	3			AC069230	5466809		18194	0	3608	21802
S/G/Y/R/B/O	NT_005927	AC090940	5466809	3			AC073515	5466809		137081	0	2811	139892
S/G/Y/R/B/O	NT_005927	AC090938	5615280	3	chr3	NT_005927	AC091069	5762016	3	52177	0	0	52177
S/G/Y/R/B/O	NT_005927	AC090938	5615280	3			AC011963	5313050		52042	0	0	52042
S/G/Y/R/B/O	NT_005927	AC091069	5762016	3	chr3	NT_005927	AC087857	5874554	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC091069	5762016	3			AC011963	5762016		161403	2505	0	163908
S/G/Y/R/B/O	NT_005927	AC087857	5874554	3	chr3	NT_005927	AC066590	5988577	3	105438	0	0	105438
S/G/Y/R/B/O	NT_005927	AC087857	5874554	3			AC011963	5615280		27826	2502	0	30328
S/G/Y/R/B/O	NT_005927	AC066590	5988577	3	chr3	NT_005927	AC027119	6069023	3	5578	0	0	5578
S/G/Y/R/B/O	NT_005927	AC066590	5988577	3			AC067948	6069023		87973	0	33382	121355
S/G/Y/R/B/O	NT_005927	AC027119	6069023	3	chr3	NT_005927	AC026167	6239031	3	0	0	28950	28950
S/G/Y/R/B/O	NT_005927	AC027119	6069023	3			AC012136	5874554		40620	7534	15894	64048
S/G/Y/R/B/O	NT_005927	AC027119	6069023	3			AC055760	6239031		115768	0	9084	124852
S/G/Y/R/B/O	NT_005927	AC027119	6069023	3			AC067948	5988577		10827	0	0	10827
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3	chr3	NT_005927	AC024162	6398753	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3			AC012041	5988577		65630	0	0	65630
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3			AC012136	5988577		37827	4366	12809	55002
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3			AC020755	5988577		57844	0	0	57844
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3			AC024159	5988577		121238	0	0	121238
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3			AC026197	5988577		58856	0	0	58856
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3			AC026205	5988577		143679	0	0	143679
S/G/Y/R/B/O	NT_005927	AC026167	6239031	3			AC055760	6069023		20934	0	2490	23424
S/G/Y/R/B/O	NT_005927	AC024162	6398753	3	chr3	NT_005927	AC025920	6560624	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC024162	6398753	3			AC024154	6069023		24721	0	0	24721
S/G/Y/R/B/O	NT_005927	AC024162	6398753	3			AC024154	6069023		24721	0	0	24721
S/G/Y/R/B/O	NT_005927	AC024162	6398753	3			AC026181	6069023		69383	3645	6219	79247
S/G/Y/R/B/O	NT_005927	AC024162	6398753	3			AC026181	6069023		69383	3645	6219	79247
S/G/Y/R/B/O	NT_005927	AC025920	6560624	3	chr3	NT_005927	AC069277	6601654	3	19974	0	0	19974
S/G/Y/R/B/O	NT_005927	AC025920	6560624	3			AC024154	6069023		65750	0	0	65750
S/G/Y/R/B/O	NT_005927	AC025920	6560624	3			AC026181	6069023		75479	10149	7025	92653
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3	chr3	NT_005927	AC023485	6741484	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC024154	6601654		159072	0	0	159072
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC024154	6601654		159072	0	0	159072
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC026179	6560624		111828	0	0	111828
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC026179	6560624		111828	0	0	111828
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC026881	6560624		124686	0	0	124686
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC026881	6560624		124686	0	0	124686
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC066584	6560624		35910	0	0	35910
S/G/Y/R/B/O	NT_005927	AC069277	6601654	3			AC066584	6560624		35910	0	0	35910
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3	chr3	NT_005927	AC066606	6861332	3	38292	0	0	38292
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC011327	6560624		88104	0	0	88104
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC011327	6560624		88104	0	0	88104
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC018493	6560624		88142	0	0	88142
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC018493	6560624		88142	0	0	88142
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC018840	6560624		33245	0	0	33245
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC018840	6560624		33245	0	0	33245
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC066584	6560624		155823	0	0	155823
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC066584	6560624		155823	0	0	155823
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC067736	6861332		30249	0	23995	54244
S/G/Y/R/B/O	NT_005927	AC023485	6741484	3			AC067736	6861332		30249	0	23995	54244
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3	chr3	NT_005927	AC026199	7004918	3	41940	0	0	41940
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC011327	6861332		118711	0	0	118711
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC011327	6861332		118711	0	0	118711
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC018493	6861332		130282	0	0	130282
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC018493	6861332		130282	0	0	130282
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC018840	6861332		134828	0	0	134828
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC018840	6861332		134828	0	0	134828
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC023514	6741484		143515	0	0	143515
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC023514	6741484		143515	0	0	143515
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC026200	7004918		102376	0	0	102376
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC026200	7004918		102376	0	0	102376
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC026217	7004918		63929	0	0	63929
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC026217	7004918		63929	0	0	63929
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC066584	7004918		38286	0	0	38286
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC066584	7004918		38286	0	0	38286
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC067736	7004918		44505	4086	71317	119908
S/G/Y/R/B/O	NT_005927	AC066606	6861332	3			AC067736	7004918		44505	4086	71317	119908
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3	chr3	NT_005927	AC066585	7164435	3	70675	0	0	70675
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC023514	7004918		70477	0	0	70477
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC023514	7004918		70477	0	0	70477
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC026200	7004918		127913	0	0	127913
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC026200	7004918		127913	0	0	127913
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC026217	7004918		171347	0	0	171347
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC026217	7004918		171347	0	0	171347
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC069247	6861332		130898	0	0	130898
S/G/Y/R/B/O	NT_005927	AC026199	7004918	3			AC069247	6861332		130898	0	0	130898
S/G/Y/R/B/O	NT_005927	AC066585	7164435	3	chr3	NT_005927	AC034194	7228602	3	59495	0	0	59495
S/G/Y/R/B/O	NT_005927	AC066585	7164435	3			AC026217	7004918		40547	0	0	40547
S/G/Y/R/B/O	NT_005927	AC066585	7164435	3			AC026217	7004918		40547	0	0	40547
S/G/Y/R/B/O	NT_005927	AC066585	7164435	3			AC069247	7228602		119831	0	0	119831
S/G/Y/R/B/O	NT_005927	AC066585	7164435	3			AC069247	7228602		119831	0	0	119831
S/G/Y/R/B/O	NT_005927	AC034194	7228602	3	chr3	NT_005927	AC026204	7348356	3	79444	0	0	79444
S/G/Y/R/B/O	NT_005927	AC034194	7228602	3			AC069247	7164435		44534	0	0	44534
S/G/Y/R/B/O	NT_005927	AC034194	7228602	3			AC069247	7164435		44534	0	0	44534
S/G/Y/R/B/O	NT_005927	AC026204	7348356	3	chr3	NT_005927	AC068313	7439956	3	24479	0	0	24479
S/G/Y/R/B/O	NT_005927	AC026204	7348356	3			AC018504	7164435		62643	0	0	62643
S/G/Y/R/B/O	NT_005927	AC026204	7348356	3			AC018504	7164435		62643	0	0	62643
S/G/Y/R/B/O	NT_005927	AC026204	7348356	3			AC026184	7164435		77257	0	0	77257
S/G/Y/R/B/O	NT_005927	AC026204	7348356	3			AC026184	7164435		77257	0	0	77257
S/G/Y/R/B/O	NT_005927	AC068313	7439956	3	chr3	NT_005927	AC077690	7599221	3	73892	0	0	73892
S/G/Y/R/B/O	NT_005927	AC068313	7439956	3			AC018504	7439956		139822	0	0	139822
S/G/Y/R/B/O	NT_005927	AC068313	7439956	3			AC018504	7439956		139822	0	0	139822
S/G/Y/R/B/O	NT_005927	AC068313	7439956	3			AC023473	7439956		112942	0	0	112942
S/G/Y/R/B/O	NT_005927	AC068313	7439956	3			AC023473	7439956		112942	0	0	112942
S/G/Y/R/B/O	NT_005927	AC068313	7439956	3			AC026184	7439956		126667	0	0	126667
S/G/Y/R/B/O	NT_005927	AC068313	7439956	3			AC026184	7439956		126667	0	0	126667
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3	chr3	NT_005927	AC024171	7725304	3	14805	0	0	14805
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC008086	7599221		11927	2649	0	14576
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC008086	7599221		11927	2649	0	14576
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC012567	7599221		83554	0	1982	85536
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC012567	7599221		83554	0	1982	85536
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC018504	7599221		30002	0	0	30002
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC018504	7599221		30002	0	0	30002
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC023473	7599221		113187	0	0	113187
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC023473	7599221		113187	0	0	113187
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC026165	7725304		126039	0	0	126039
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC026165	7725304		126039	0	0	126039
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC026184	7725304		16835	0	0	16835
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC026184	7725304		16835	0	0	16835
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC027121	7725304		69444	0	0	69444
S/G/Y/R/B/O	NT_005927	AC077690	7599221	3			AC027121	7725304		69444	0	0	69444
S/G/Y/R/B/O	NT_005927	AC024171	7725304	3	chr3	NT_005927	AC069276	7919377	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC024171	7725304	3			AC008086	7439956		111487	2200	14680	128367
S/G/Y/R/B/O	NT_005927	AC024171	7725304	3			AC008086	7439956		111487	2200	14680	128367
S/G/Y/R/B/O	NT_005927	AC024171	7725304	3			AC012567	7439956		91357	0	0	91357
S/G/Y/R/B/O	NT_005927	AC024171	7725304	3			AC012567	7439956		91357	0	0	91357
S/G/Y/R/B/O	NT_005927	AC024171	7725304	3			AC027121	7439956		108039	0	0	108039
S/G/Y/R/B/O	NT_005927	AC024171	7725304	3			AC027121	7439956		108039	0	0	108039
S/G/Y/R/B/O	NT_005927	AC069276	7919377	3	chr3	NT_005927	AC018832	7990346	3	31445	0	0	31445
S/G/Y/R/B/O	NT_005927	AC069276	7919377	3			AC008086	7599221		49111	0	8599	57710
S/G/Y/R/B/O	NT_005927	AC069276	7919377	3			AC008086	7599221		49111	0	8599	57710
S/G/Y/R/B/O	NT_005927	AC069276	7919377	3			AC023472	7990346		65775	0	0	65775
S/G/Y/R/B/O	NT_005927	AC069276	7919377	3			AC023472	7990346		65775	0	0	65775
S/G/Y/R/B/O	NT_005927	AC069276	7919377	3			AC069275	7990346		102437	0	0	102437
S/G/Y/R/B/O	NT_005927	AC069276	7919377	3			AC069275	7990346		102437	0	0	102437
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3	chr3	NT_005927	AC087589	8144393	3	42389	0	0	42389
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC023472	7990346		132881	0	0	132881
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC023472	7990346		132881	0	0	132881
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC024146	7990346		63804	0	25042	88846
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC024146	7990346		63804	0	25042	88846
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC024164	7990346		29008	0	0	29008
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC024164	7990346		29008	0	0	29008
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC024219	7990346		23733	0	4979	28712
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC024219	7990346		23733	0	4979	28712
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC066598	7990346		105384	0	0	105384
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC066598	7990346		105384	0	0	105384
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC069275	7990346		80077	0	0	80077
S/G/Y/R/B/O	NT_005927	AC018832	7990346	3			AC069275	7990346		80077	0	0	80077
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3	chr3	NT_005927	AC023481	8278347	3	5293	0	0	5293
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC024146	8278347		50370	0	2789	53159
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC024146	8278347		50370	0	2789	53159
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC024164	8278347		152559	0	0	152559
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC024164	8278347		152559	0	0	152559
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC024219	8278347		112759	0	27310	140069
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC024219	8278347		112759	0	27310	140069
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC066598	8278347		79171	0	0	79171
S/G/Y/R/B/O	NT_005927	AC087589	8144393	3			AC066598	8278347		79171	0	0	79171
S/G/Y/R/B/O	NT_005927	AC023481	8278347	3	chr3	NT_005927	AC087859	8462408	3	54038	0	0	54038
S/G/Y/R/B/O	NT_005927	AC023481	8278347	3			AC018355	8278347		49081	0	0	49081
S/G/Y/R/B/O	NT_005927	AC023481	8278347	3			AC018355	8278347		49081	0	0	49081
S/G/Y/R/B/O	NT_005927	AC023481	8278347	3			AC026236	8278347		79385	0	10034	89419
S/G/Y/R/B/O	NT_005927	AC023481	8278347	3			AC026236	8278347		79385	0	10034	89419
S/G/Y/R/B/O	NT_005927	AC087859	8462408	3	chr3	NT_005927	AC034187	8520657	3	39111	0	0	39111
S/G/Y/R/B/O	NT_005927	AC087859	8462408	3			AC018355	8462408		73666	0	61206	134872
S/G/Y/R/B/O	NT_005927	AC087859	8462408	3			AC018355	8462408		73666	0	61206	134872
S/G/Y/R/B/O	NT_005927	AC087859	8462408	3			AC025210	8278347		72581	0	19328	91909
S/G/Y/R/B/O	NT_005927	AC087859	8462408	3			AC025210	8278347		72581	0	19328	91909
S/G/Y/R/B/O	NT_005927	AC087859	8462408	3			AC026236	8278347		57658	0	10017	67675
S/G/Y/R/B/O	NT_005927	AC087859	8462408	3			AC026236	8278347		57658	0	10017	67675
S/G/Y/R/B/O	NT_005927	AC034187	8520657	3	chr3	NT_005927	AC068312	8692373	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC034187	8520657	3			AC018355	8520657		19297	0	8693	27990
S/G/Y/R/B/O	NT_005927	AC034187	8520657	3			AC018355	8520657		19297	0	8693	27990
S/G/Y/R/B/O	NT_005927	AC034187	8520657	3			AC025210	8520657		124067	2131	31806	158004
S/G/Y/R/B/O	NT_005927	AC034187	8520657	3			AC025210	8520657		124067	2131	31806	158004
S/G/Y/R/B/O	NT_005927	AC034187	8520657	3			AF176315	8462408		75121	0	0	75121
S/G/Y/R/B/O	NT_005927	AC034187	8520657	3			AF176315	8462408		75121	0	0	75121
S/G/Y/R/B/O	NT_005927	AC068312	8692373	3	chr3	NT_005927	AC008151	8706692	3	115212	0	0	115212
S/G/Y/R/B/O	NT_005927	AC008151	8706692	3	chr3	NT_005927	AC034186	8884934	3	2978	0	0	2978
S/G/Y/R/B/O	NT_005927	AC008151	8706692	3			AC022070	8706692		49012	0	0	49012
S/G/Y/R/B/O	NT_005927	AC008151	8706692	3			AC024169	8706692		115265	0	0	115265
S/G/Y/R/B/O	NT_005927	AC008151	8706692	3			AC026161	8706692		50110	0	0	50110
S/G/Y/R/B/O	NT_005927	AC008151	8706692	3			AF176315	8692373		75123	0	0	75123
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3	chr3	NT_005927	AC037193	9032213	3	13381	0	0	13381
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC022070	8706692		69362	0	13166	82528
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC022070	8706692		69362	0	13166	82528
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC026161	8706692		120166	0	0	120166
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC026161	8706692		120166	0	0	120166
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC055745	9032213		56535	0	0	56535
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC055745	9032213		56535	0	0	56535
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC087308	9032213		90364	0	0	90364
S/G/Y/R/B/O	NT_005927	AC034186	8884934	3			AC087308	9032213		90364	0	0	90364
S/G/Y/R/B/O	NT_005927	AC037193	9032213	3	chr3	NT_005927	AC066583	9201076	3	152888	0	0	152888
S/G/Y/R/B/O	NT_005927	AC037193	9032213	3			AC048350	8884934		40385	5184	59339	104908
S/G/Y/R/B/O	NT_005927	AC037193	9032213	3			AC048350	8884934		40385	5184	59339	104908
S/G/Y/R/B/O	NT_005927	AC037193	9032213	3			AC055745	8884934		57177	0	0	57177
S/G/Y/R/B/O	NT_005927	AC037193	9032213	3			AC055745	8884934		57177	0	0	57177
S/G/Y/R/B/O	NT_005927	AC066583	9201076	3	chr3	NT_005927	AC026191	9208795	3	0	0	7372	7372
S/G/Y/R/B/O	NT_005927	AC066583	9201076	3			AC048350	9032213		53838	8288	50382	112508
S/G/Y/R/B/O	NT_005927	AC066583	9201076	3			AC048350	9032213		53838	8288	50382	112508
S/G/Y/R/B/O	NT_005927	AC066583	9201076	3			AC055745	9032213		28095	0	0	28095
S/G/Y/R/B/O	NT_005927	AC066583	9201076	3			AC055745	9032213		28095	0	0	28095
S/G/Y/R/B/O	NT_005927	AC066583	9201076	3			AC078798	9032213		12353	0	0	12353
S/G/Y/R/B/O	NT_005927	AC066583	9201076	3			AC078798	9032213		12353	0	0	12353
S/G/Y/R/B/O	NT_005927	AC026191	9208795	3	chr3	NT_005927	AC018506	9365590	3	64683	0	0	64683
S/G/Y/R/B/O	NT_005927	AC026191	9208795	3			AC018823	9365590		33594	0	52168	85762
S/G/Y/R/B/O	NT_005927	AC026191	9208795	3			AC024056	9365590		21443	0	0	21443
S/G/Y/R/B/O	NT_005927	AC026191	9208795	3			AC048350	9365590		17918	0	13951	31869
S/G/Y/R/B/O	NT_005927	AC026191	9208795	3			AC087407	9201076		50818	0	0	50818
S/G/Y/R/B/O	NT_005927	AC018506	9365590	3	chr3	NT_005927	AC026194	9492411	3	86437	0	0	86437
S/G/Y/R/B/O	NT_005927	AC018506	9365590	3			AC026172	9201076		86437	0	0	86437
S/G/Y/R/B/O	NT_005927	AC018506	9365590	3			AC026172	9201076		86437	0	0	86437
S/G/Y/R/B/O	NT_005927	AC018506	9365590	3			AC087407	9492411		102066	0	0	102066
S/G/Y/R/B/O	NT_005927	AC018506	9365590	3			AC087407	9492411		102066	0	0	102066
S/G/Y/R/B/O	NT_005927	AC026194	9492411	3	chr3	NT_005927	AC024163	9587541	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC026194	9492411	3			AC023058	9365590		73997	0	0	73997
S/G/Y/R/B/O	NT_005927	AC026194	9492411	3			AC023058	9365590		73997	0	0	73997
S/G/Y/R/B/O	NT_005927	AC026194	9492411	3			AC026172	9365590		181598	0	0	181598
S/G/Y/R/B/O	NT_005927	AC026194	9492411	3			AC026172	9365590		181598	0	0	181598
S/G/Y/R/B/O	NT_005927	AC026194	9492411	3			AC087407	9365590		11088	0	0	11088
S/G/Y/R/B/O	NT_005927	AC026194	9492411	3			AC087407	9365590		11088	0	0	11088
S/G/Y/R/B/O	NT_005927	AC024163	9587541	3	chr3	NT_005927	AC022382	9675996	3	43955	0	0	43955
S/G/Y/R/B/O	NT_005927	AC024163	9587541	3			AC008034	9365590		38633	0	0	38633
S/G/Y/R/B/O	NT_005927	AC024163	9587541	3			AC008034	9365590		38633	0	0	38633
S/G/Y/R/B/O	NT_005927	AC024163	9587541	3			AC011610	9365590		14961	0	4455	19416
S/G/Y/R/B/O	NT_005927	AC024163	9587541	3			AC011610	9365590		14961	0	4455	19416
S/G/Y/R/B/O	NT_005927	AC022382	9675996	3	chr3	NT_005927	AC018809	9817080	3	73330	0	0	73330
S/G/Y/R/B/O	NT_005927	AC022382	9675996	3			AC007850	9675996		38938	0	0	38938
S/G/Y/R/B/O	NT_005927	AC022382	9675996	3			AC008034	9675996		44773	0	0	44773
S/G/Y/R/B/O	NT_005927	AC022382	9675996	3			AC011610	9675996		64699	0	50555	115254
S/G/Y/R/B/O	NT_005927	AC022382	9675996	3			AC026196	9587541		10728	0	7446	18174
S/G/Y/R/B/O	NT_005927	AC022382	9675996	3			AC066599	9587541		32119	0	46141	78260
S/G/Y/R/B/O	NT_005927	AC022382	9675996	3			AC068315	9587541		75481	9639	32175	117295
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3	chr3	NT_005927	AC022007	9960641	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3			AC007783	9587541		115442	0	0	115442
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3			AC011610	9587541		41189	0	26353	67542
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3			AC018808	9587541		25926	0	0	25926
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3			AC018808	9587541		25926	0	0	25926
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3			AC024612	9675996		102121	2527	2374	107022
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3			AC026196	9675996		28586	4571	30153	63310
S/G/Y/R/B/O	NT_005927	AC018809	9817080	3			AC068315	9675996		33472	9493	25738	68703
S/G/Y/R/B/O	NT_005927	AC022007	9960641	3	chr3	NT_005927	AC034193	10004464	3	0	0	27692	27692
S/G/Y/R/B/O	NT_005927	AC022007	9960641	3			AC007783	9675996		159351	0	0	159351
S/G/Y/R/B/O	NT_005927	AC022007	9960641	3			AC024612	9675996		113200	6052	13590	132842
S/G/Y/R/B/O	NT_005927	AC022007	9960641	3			AC026196	9675996		16036	5617	12581	34234
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3	chr3	NT_005927	AC018828	10145666	3	114373	0	0	114373
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3	chr3	NT_005927	AC022384	10209556	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3	chr3	NT_005927	AC022384	10209556	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3	chr3	NT_005927	AC022384	10209556	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3	chr3	NT_005927	AC022384	10209556	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC007783	10004464		37049	0	0	37049
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC007783	10004464		37049	0	0	37049
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC007999	10004464		80678	0	0	80678
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC007999	10004464		80678	0	0	80678
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC018808	10004464		165716	0	0	165716
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC018808	10004464		165716	0	0	165716
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC018808	10004464		165716	0	0	165716
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC018808	10004464		165716	0	0	165716
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC022383	9960641		90249	0	0	90249
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC022383	9960641		90249	0	0	90249
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC024612	10209556		14507	1981	5438	21926
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC024612	10209556		14507	1981	5438	21926
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC069337	10209556		11228	4920	78589	94737
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC069337	10209556		11228	4920	78589	94737
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC069461	10209556		168984	0	0	168984
S/G/Y/R/B/O	NT_005927	AC034193	10004464	3			AC069461	10209556		168984	0	0	168984
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3	chr3	NT_005927	AC022384	10209556	3	107158	0	0	107158
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC007999	10209556		55648	0	0	55648
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC008032	10209556		50173	0	35330	85503
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC018808	10209556		111133	0	0	111133
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC018808	10209556		111133	0	0	111133
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC022383	10209556		154120	0	0	154120
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC023236	10209556		18059	8120	51278	77457
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC067722	10004464		67598	0	0	67598
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC069337	10004464		11228	2010	24915	38153
S/G/Y/R/B/O	NT_005927	AC018828	10145666	3			AC069461	10004464		114380	0	0	114380
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC008116	10312396	3	88010	0	0	88010
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC034193	10004464	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC034193	10004464	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC034193	10004464	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC034193	10004464	3	43288	0	0	43288
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC090841	10329186	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC090841	10329186	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC090841	10329186	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3	chr3	NT_005927	AC090841	10329186	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC008032	10004464		70377	0	25571	95948
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC008032	10004464		70377	0	25571	95948
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC012515	10312396		60422	1640	980	63042
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC012515	10312396		60422	1640	980	63042
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC012600	10312396		38418	0	0	38418
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC012600	10312396		38418	0	0	38418
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC018808	10312396		40046	0	0	40046
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC018808	10312396		40046	0	0	40046
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC018808	10312396		40046	0	0	40046
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC018808	10312396		40046	0	0	40046
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC022383	10145666		141639	0	0	141639
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC022383	10145666		141639	0	0	141639
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC023236	10145666		13301	3884	39526	56711
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC023236	10145666		13301	3884	39526	56711
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC067722	10004464		77829	0	0	77829
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC067722	10004464		77829	0	0	77829
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC069461	10004464		43293	0	0	43293
S/G/Y/R/B/O	NT_005927	AC022384	10209556	3			AC069461	10004464		43293	0	0	43293
S/G/Y/R/B/O	NT_005927	AC008116	10312396	3	chr3	NT_005927	AC090841	10329186	3	65516	0	0	65516
S/G/Y/R/B/O	NT_005927	AC008116	10312396	3			AC012515	10329186		76971	0	2426	79397
S/G/Y/R/B/O	NT_005927	AC008116	10312396	3			AC012600	10329186		54978	0	0	54978
S/G/Y/R/B/O	NT_005927	AC008116	10312396	3			AC022383	10329186		19747	0	0	19747
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3	chr3	NT_005927	AC018839	10481320	3	86046	0	0	86046
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3	chr3	NT_005927	AC022384	10209556	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3	chr3	NT_005927	AC022384	10209556	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3	chr3	NT_005927	AC022384	10209556	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3	chr3	NT_005927	AC022384	10209556	3	48831	0	0	48831
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC008000	10329186		130940	0	0	130940
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC008000	10329186		130940	0	0	130940
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC012515	10312396		78206	2801	37903	118910
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC012515	10312396		78206	2801	37903	118910
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC012600	10312396		205236	0	0	205236
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC012600	10312396		205236	0	0	205236
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC023501	10209556		19778	0	0	19778
S/G/Y/R/B/O	NT_005927	AC090841	10329186	3			AC023501	10209556		19778	0	0	19778
S/G/Y/R/B/O	NT_005927	AC018839	10481320	3	chr3	NT_005927	AC018502	10577562	3	96231	0	0	96231
S/G/Y/R/B/O	NT_005927	AC018839	10481320	3			AC008000	10209556		84823	0	0	84823
S/G/Y/R/B/O	NT_005927	AC018839	10481320	3			AC008000	10209556		84823	0	0	84823
S/G/Y/R/B/O	NT_005927	AC018839	10481320	3			AC012600	10209556		85203	0	0	85203
S/G/Y/R/B/O	NT_005927	AC018839	10481320	3			AC012600	10209556		85203	0	0	85203
S/G/Y/R/B/O	NT_005927	AC018839	10481320	3			AC018499	10209556		96225	0	0	96225
S/G/Y/R/B/O	NT_005927	AC018839	10481320	3			AC018499	10209556		96225	0	0	96225
S/G/Y/R/B/O	NT_005927	AC018502	10577562	3	chr3	NT_005927	AC018495	10679778	3	23203	0	0	23203
S/G/Y/R/B/O	NT_005927	AC018502	10577562	3			AC011830	10329186		71508	6575	1456	79539
S/G/Y/R/B/O	NT_005927	AC018502	10577562	3			AC011830	10329186		71508	6575	1456	79539
S/G/Y/R/B/O	NT_005927	AC018502	10577562	3			AC018499	10679778		198442	0	0	198442
S/G/Y/R/B/O	NT_005927	AC018502	10577562	3			AC018499	10679778		198442	0	0	198442
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3	chr3	NT_005927	AC027128	10830164	3	76875	0	0	76875
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC011830	10481320		75518	2014	3484	81016
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC011830	10481320		75518	2014	3484	81016
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC013503	10481320		63807	0	0	63807
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC013503	10481320		63807	0	0	63807
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC018499	10481320		23203	0	0	23203
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC018499	10481320		23203	0	0	23203
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC018818	10577562		156181	0	0	156181
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC018818	10577562		156181	0	0	156181
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC022379	10577562		11369	0	0	11369
S/G/Y/R/B/O	NT_005927	AC018495	10679778	3			AC022379	10577562		11369	0	0	11369
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3	chr3	NT_005927	AC024910	10929051	3	73300	0	0	73300
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC013503	10830164		146072	0	0	146072
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC013503	10830164		146072	0	0	146072
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC018818	10679778		73295	0	0	73295
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC018818	10679778		73295	0	0	73295
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC022379	10679778		110199	0	0	110199
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC022379	10679778		110199	0	0	110199
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC023181	10679778		16325	0	0	16325
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC023181	10679778		16325	0	0	16325
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC023471	10679778		153391	0	0	153391
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC023471	10679778		153391	0	0	153391
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC074081	10929051		33889	0	0	33889
S/G/Y/R/B/O	NT_005927	AC027128	10830164	3			AC074081	10929051		33889	0	0	33889
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3	chr3	NT_005927	AC066580	11063292	3	107130	0	0	107130
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC013503	10929051		53806	0	0	53806
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC013503	10929051		53806	0	0	53806
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC022379	10929051		185558	0	0	185558
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC022379	10929051		185558	0	0	185558
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC023181	10929051		103162	0	44725	147887
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC023181	10929051		103162	0	44725	147887
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC023471	10929051		51130	0	0	51130
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC023471	10929051		51130	0	0	51130
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC074081	11063292		117212	5301	0	122513
S/G/Y/R/B/O	NT_005927	AC024910	10929051	3			AC074081	11063292		117212	5301	0	122513
S/G/Y/R/B/O	NT_005927	AC066580	11063292	3	chr3	NT_005927	AC083855	11105345	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC066580	11063292	3			AC022379	11063292		85169	0	0	85169
S/G/Y/R/B/O	NT_005927	AC066580	11063292	3			AC022379	11063292		85169	0	0	85169
S/G/Y/R/B/O	NT_005927	AC066580	11063292	3			AC023181	11063292		59851	0	44740	104591
S/G/Y/R/B/O	NT_005927	AC066580	11063292	3			AC023181	11063292		59851	0	44740	104591
S/G/Y/R/B/O	NT_005927	AC066580	11063292	3			AC074081	10929051		56667	5301	0	61968
S/G/Y/R/B/O	NT_005927	AC066580	11063292	3			AC074081	10929051		56667	5301	0	61968
S/G/Y/R/B/O	NT_005927	AC083855	11105345	3	chr3	NT_005927	AC020750	11274173	3	63571	0	0	63571
S/G/Y/R/B/O	NT_005927	AC083855	11105345	3			AC017052	10929051		56937	0	7146	64083
S/G/Y/R/B/O	NT_005927	AC083855	11105345	3			AC017052	10929051		56937	0	7146	64083
S/G/Y/R/B/O	NT_005927	AC083855	11105345	3			AC024166	11274173		158657	0	0	158657
S/G/Y/R/B/O	NT_005927	AC083855	11105345	3			AC024166	11274173		158657	0	0	158657
S/G/Y/R/B/O	NT_005927	AC020750	11274173	3	chr3	NT_005927	AC026185	11367111	3	24865	0	0	24865
S/G/Y/R/B/O	NT_005927	AC020750	11274173	3			AC017052	11274173		78039	1622	18491	98152
S/G/Y/R/B/O	NT_005927	AC020750	11274173	3			AC024166	11274173		31845	0	0	31845
S/G/Y/R/B/O	NT_005927	AC026185	11367111	3	chr3	NT_005927	AC022001	11497165	3	8120	0	0	8120
S/G/Y/R/B/O	NT_005927	AC026185	11367111	3			AC018494	11105345		76474	0	0	76474
S/G/Y/R/B/O	NT_005927	AC026185	11367111	3			AC018494	11105345		76474	0	0	76474
S/G/Y/R/B/O	NT_005927	AC026185	11367111	3			AC018811	11105345		39613	0	0	39613
S/G/Y/R/B/O	NT_005927	AC026185	11367111	3			AC018811	11105345		39613	0	0	39613
S/G/Y/R/B/O	NT_005927	AC022001	11497165	3	chr3	NT_005927	AC090939	11653618	3	18349	0	0	18349
S/G/Y/R/B/O	NT_005927	AC022001	11497165	3			AC012086	11497165		131860	0	28520	160380
S/G/Y/R/B/O	NT_005927	AC022001	11497165	3			AC018494	11497165		105997	0	0	105997
S/G/Y/R/B/O	NT_005927	AC022001	11497165	3			AC018811	11497165		146131	0	0	146131
S/G/Y/R/B/O	NT_005927	AC090939	11653618	3	chr3	NT_005927	AC090958	11796613	3	0	0	21380	21380
S/G/Y/R/B/O	NT_005927	AC090939	11653618	3			AC026020	11497165		28045	4034	15460	47539
S/G/Y/R/B/O	NT_005927	AC090939	11653618	3			AC026020	11497165		28045	4034	15460	47539
S/G/Y/R/B/O	NT_005927	AC090958	11796613	3	chr3	NT_005927	AC022234	11925154	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC090958	11796613	3			AC022875	11796613		40640	0	0	40640
S/G/Y/R/B/O	NT_005927	AC090958	11796613	3			AC022875	11796613		40640	0	0	40640
S/G/Y/R/B/O	NT_005927	AC090958	11796613	3			AC026020	11796613		22208	4214	9327	35749
S/G/Y/R/B/O	NT_005927	AC090958	11796613	3			AC026020	11796613		22208	4214	9327	35749
S/G/Y/R/B/O	NT_005927	AC022234	11925154	3	chr3	NT_005927	AC026166	12022885	3	32529	0	0	32529
S/G/Y/R/B/O	NT_005927	AC022234	11925154	3			AC022875	11653618		71116	0	0	71116
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3	chr3	NT_005927	AC091492	12154221	3	23087	0	0	23087
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC015995	12022885		23077	0	0	23077
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC015995	12022885		23077	0	0	23077
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC018841	12022885		83429	0	0	83429
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC018841	12022885		83429	0	0	83429
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC022374	11925154		52519	0	0	52519
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC022374	11925154		52519	0	0	52519
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC022875	11925154		29776	0	6867	36643
S/G/Y/R/B/O	NT_005927	AC026166	12022885	3			AC022875	11925154		29776	0	6867	36643
S/G/Y/R/B/O	NT_005927	AC091492	12154221	3	chr3	NT_005927	AC093174	12312087	3	60918	0	0	60918
S/G/Y/R/B/O	NT_005927	AC091492	12154221	3			AC015995	12154221		129780	0	42911	172691
S/G/Y/R/B/O	NT_005927	AC091492	12154221	3			AC015995	12154221		129780	0	42911	172691
S/G/Y/R/B/O	NT_005927	AC091492	12154221	3			AC093494	12312087		78394	0	0	78394
S/G/Y/R/B/O	NT_005927	AC091492	12154221	3			AC093494	12312087		78394	0	0	78394
S/G/Y/R/B/O	NT_005927	AC093174	12312087	3	chr3	NT_005927	AC090947	12386821	3	74660	0	0	74660
S/G/Y/R/B/O	NT_005927	AC093174	12312087	3			AC015995	12312087		40754	0	17105	57859
S/G/Y/R/B/O	NT_005927	AC093174	12312087	3			AC015995	12312087		40754	0	17105	57859
S/G/Y/R/B/O	NT_005927	AC093174	12312087	3			AC027126	12312087		49995	0	0	49995
S/G/Y/R/B/O	NT_005927	AC093174	12312087	3			AC027126	12312087		49995	0	0	49995
S/G/Y/R/B/O	NT_005927	AC090947	12386821	3	chr3	NT_005927	AC018500	12478157	3	38534	0	0	38534
S/G/Y/R/B/O	NT_005927	AC090947	12386821	3			AC024101	12478157		57378	5281	17464	80123
S/G/Y/R/B/O	NT_005927	AC090947	12386821	3			AC024101	12478157		57378	5281	17464	80123
S/G/Y/R/B/O	NT_005927	AC090947	12386821	3			AC027126	12478157		141258	0	0	141258
S/G/Y/R/B/O	NT_005927	AC090947	12386821	3			AC027126	12478157		141258	0	0	141258
S/G/Y/R/B/O	NT_005927	AC018500	12478157	3	chr3	NT_005927	AC026170	12590417	3	34669	0	0	34669
S/G/Y/R/B/O	NT_005927	AC018500	12478157	3			AC024101	81380419		53732	2321	27660	83713
S/G/Y/R/B/O	NT_005927	AC018500	12478157	3			AC024101	81380419		53732	2321	27660	83713
S/G/Y/R/B/O	NT_005927	AC018500	12478157	3			AC026153	81380419		96155	0	0	96155
S/G/Y/R/B/O	NT_005927	AC018500	12478157	3			AC026153	81380419		96155	0	0	96155
S/G/Y/R/B/O	NT_005927	AC018500	12478157	3			AC027126	12590417		82752	0	0	82752
S/G/Y/R/B/O	NT_005927	AC018500	12478157	3			AC027126	12590417		82752	0	0	82752
S/G/Y/R/B/O	NT_005927	AC026170	12590417	3	chr3	NT_005927	AC034198	12700861	3	7124	0	0	7124
S/G/Y/R/B/O	NT_005927	AC026170	12590417	3			AC026153	12478157		49803	0	1567	51370
S/G/Y/R/B/O	NT_005927	AC026170	12590417	3			AC026153	12478157		49803	0	1567	51370
S/G/Y/R/B/O	NT_005927	AC034198	12700861	3	chr3	NT_005927	AC018836	12862722	3	106064	0	0	106064
S/G/Y/R/B/O	NT_005927	AC034198	12700861	3			AC011599	12700861		14493	0	0	14493
S/G/Y/R/B/O	NT_005927	AC034198	12700861	3			AC011599	12700861		14493	0	0	14493
S/G/Y/R/B/O	NT_005927	AC034198	12700861	3			AC018843	12862722		67973	0	0	67973
S/G/Y/R/B/O	NT_005927	AC034198	12700861	3			AC018843	12862722		67973	0	0	67973
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3	chr3	NT_005927	AC069271	12941369	3	31301	0	0	31301
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC011599	12590417		70749	0	21073	91822
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC011599	12590417		70749	0	21073	91822
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC018505	12590417		78618	0	0	78618
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC018505	12590417		78618	0	0	78618
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC018831	12590417		32763	0	0	32763
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC018831	12590417		32763	0	0	32763
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC018843	12590417		146596	0	0	146596
S/G/Y/R/B/O	NT_005927	AC018836	12862722	3			AC018843	12590417		146596	0	0	146596
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3	chr3	NT_005927	AC069246	13139449	3	6467	0	0	6467
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC011599	12941369		148541	0	0	148541
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC011599	12941369		148541	0	0	148541
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC018505	12941369		148604	0	0	148604
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC018505	12941369		148604	0	0	148604
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC018831	12941369		177018	0	0	177018
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC018831	12941369		177018	0	0	177018
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC018843	12862722		95639	0	0	95639
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC018843	12862722		95639	0	0	95639
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC026218	12862722		164605	0	0	164605
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC026218	12862722		164605	0	0	164605
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC090956	13139449		181890	0	0	181890
S/G/Y/R/B/O	NT_005927	AC069271	12941369	3			AC090956	13139449		181890	0	0	181890
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3	chr3	NT_005927	AC027124	13308104	3	3029	0	0	3029
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC017001	13139449		110017	3690	22094	135801
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC017001	13139449		110017	3690	22094	135801
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC026218	13139449		40223	0	0	40223
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC026218	13139449		40223	0	0	40223
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC066589	13308104		128054	0	0	128054
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC066589	13308104		128054	0	0	128054
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC069526	12941369		61868	0	50674	112542
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC069526	12941369		61868	0	50674	112542
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC072042	12941369		109947	6094	27516	143557
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC072042	12941369		109947	6094	27516	143557
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC079823	12941369		37088	0	2662	39750
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC079823	12941369		37088	0	2662	39750
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC090885	12941369		169663	0	0	169663
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC090885	12941369		169663	0	0	169663
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC090942	12941369		32982	0	0	32982
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC090942	12941369		32982	0	0	32982
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC090956	12941369		27214	0	0	27214
S/G/Y/R/B/O	NT_005927	AC069246	13139449	3			AC090956	12941369		27214	0	0	27214
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3	chr3	NT_005927	AC090509	13514047	3	39671	0	0	39671
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC018566	12941369		20905	2973	11068	34946
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC018566	12941369		20905	2973	11068	34946
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC066589	12941369		57125	0	0	57125
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC066589	12941369		57125	0	0	57125
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC090942	13514047		142238	0	0	142238
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC090942	13514047		142238	0	0	142238
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC090951	13514047		74222	0	0	74222
S/G/Y/R/B/O	NT_005927	AC027124	13308104	3			AC090951	13514047		74222	0	0	74222
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3	chr3	NT_005927	AC093611	13640324	3	19195	0	0	19195
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC018566	13514047		122844	6162	28418	157424
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC018566	13514047		122844	6162	28418	157424
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC066597	13308104		120949	0	0	120949
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC066597	13308104		120949	0	0	120949
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC068319	13308104		165995	0	0	165995
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC068319	13308104		165995	0	0	165995
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC090005	13308104		165989	0	0	165989
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC090005	13308104		165989	0	0	165989
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC090951	13308104		146792	0	0	146792
S/G/Y/R/B/O	NT_005927	AC090509	13514047	3			AC090951	13308104		146792	0	0	146792
S/G/Y/R/B/O	NT_005927	AC093611	13640324	3	chr3	NT_005927	AC090646	13739980	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC093611	13640324	3			AC018566	13640324		13707	2206	2038	17951
S/G/Y/R/B/O	NT_005927	AC093611	13640324	3			AC018566	13640324		13707	2206	2038	17951
S/G/Y/R/B/O	NT_005927	AC093611	13640324	3			AC068319	13640324		19190	0	0	19190
S/G/Y/R/B/O	NT_005927	AC093611	13640324	3			AC068319	13640324		19190	0	0	19190
S/G/Y/R/B/O	NT_005927	AC093611	13640324	3			AC090005	13640324		27612	0	0	27612
S/G/Y/R/B/O	NT_005927	AC093611	13640324	3			AC090005	13640324		27612	0	0	27612
S/G/Y/R/B/O	NT_005927	AC090646	13739980	3	chr3	NT_005927	AC069462	13897659	3	0	0	40271	40271
S/G/Y/R/B/O	NT_005927	AC090646	13739980	3			AC024151	13514047		14159	0	1497	15656
S/G/Y/R/B/O	NT_005927	AC090646	13739980	3			AC024151	13514047		14159	0	1497	15656
S/G/Y/R/B/O	NT_005927	AC069462	13897659	3	chr3	NT_005927	AC090004	14018787	3	0	0	61941	61941
S/G/Y/R/B/O	NT_005927	AC069462	13897659	3			AC024151	13897659		14159	0	23535	37694
S/G/Y/R/B/O	NT_005927	AC069462	13897659	3			AC024151	13897659		14159	0	23535	37694
S/G/Y/R/B/O	NT_005927	AC090004	14018787	3	chr3	NT_005927	AC093495	14126197	3	57737	0	0	57737
S/G/Y/R/B/O	NT_005927	AC090004	14018787	3			AC090886	13897659		106217	0	0	106217
S/G/Y/R/B/O	NT_005927	AC090004	14018787	3			AC090886	13897659		106217	0	0	106217
S/G/Y/R/B/O	NT_005927	AC093495	14126197	3	chr3	NT_005927	AC093496	14241521	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC093495	14126197	3			AC090645	14018787		112680	0	0	112680
S/G/Y/R/B/O	NT_005927	AC093495	14126197	3			AC090645	14018787		112680	0	0	112680
S/G/Y/R/B/O	NT_005927	AC093495	14126197	3			AC090886	14018787		120291	0	0	120291
S/G/Y/R/B/O	NT_005927	AC093495	14126197	3			AC090886	14018787		120291	0	0	120291
S/G/Y/R/B/O	NT_005927	AC093496	14241521	3	chr3	NT_005927	AC090941	14385189	3	102954	0	0	102954
S/G/Y/R/B/O	NT_005927	AC090941	14385189	3	chr3	NT_005927	AC090952	14469365	3	3738	0	0	3738
S/G/Y/R/B/O	NT_005927	AC090952	14469365	3	chr3	NT_005927	AC090957	14655351	3	38925	0	0	38925
S/G/Y/R/B/O	NT_005927	AC090957	14655351	3	chr3	NT_005927	AC087591	14768099	3	67731	0	0	67731
S/G/Y/R/B/O	NT_005927	AC090957	14655351	3			AC024545	14655351		12887	7401	1791	22079
S/G/Y/R/B/O	NT_005927	AC090957	14655351	3			AC025163	14655351		10540	2072	0	12612
S/G/Y/R/B/O	NT_005927	AC087591	14768099	3	chr3	NT_005927	AC090937	14861280	3	10077	0	0	10077
S/G/Y/R/B/O	NT_005927	AC087591	14768099	3			AC024545	14469365		66890	16708	23568	107166
S/G/Y/R/B/O	NT_005927	AC087591	14768099	3			AC024545	14469365		66890	16708	23568	107166
S/G/Y/R/B/O	NT_005927	AC087591	14768099	3			AC025163	14469365		67288	2075	3087	72450
S/G/Y/R/B/O	NT_005927	AC087591	14768099	3			AC025163	14469365		67288	2075	3087	72450
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3	chr3	NT_005927	AC090954	15011846	3	0	1179	0	1179
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC024098	14655351		52517	1086	46342	99945
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC024098	14655351		52517	1086	46342	99945
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC024545	14655351		50740	7856	8600	67196
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC024545	14655351		50740	7856	8600	67196
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC025163	14655351		23918	0	5329	29247
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC025163	14655351		23918	0	5329	29247
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC093179	15011846		123780	0	0	123780
S/G/Y/R/B/O	NT_005927	AC090937	14861280	3			AC093179	15011846		123780	0	0	123780
S/G/Y/R/B/O	NT_005927	AC090954	15011846	3	chr3	NT_005927	AC087590	15178675	3	17237	0	0	17237
S/G/Y/R/B/O	NT_005927	AC090954	15011846	3			AC024098	15011846		32023	1922	8268	42213
S/G/Y/R/B/O	NT_005927	AC090954	15011846	3			AC026102	15011846		55601	2757	20761	79119
S/G/Y/R/B/O	NT_005927	AC090954	15011846	3			AC090949	14861280		65967	0	0	65967
S/G/Y/R/B/O	NT_005927	AC090954	15011846	3			AC090949	14861280		65967	0	0	65967
S/G/Y/R/B/O	NT_005927	AC090954	15011846	3			AC093179	14861280		58702	0	0	58702
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3	chr3	NT_005927	AC027125	15349561	3	48957	0	0	48957
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC026102	14861280		41359	0	0	41359
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC026102	14861280		41359	0	0	41359
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC069521	15349561		35868	9229	33976	79073
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC069521	15349561		35868	9229	33976	79073
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC090949	15349561		127966	0	0	127966
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC090949	15349561		127966	0	0	127966
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC090949	15349561		127966	0	0	127966
S/G/Y/R/B/O	NT_005927	AC087590	15178675	3			AC090949	15349561		127966	0	0	127966
S/G/Y/R/B/O	NT_005927	AC027125	15349561	3	chr3	NT_005927	AC027129	15474416	3	37952	0	0	37952
S/G/Y/R/B/O	NT_005927	AC027125	15349561	3			AC069521	15474416		16266	0	5823	22089
S/G/Y/R/B/O	NT_005927	AC027125	15349561	3			AC069521	15474416		16266	0	5823	22089
S/G/Y/R/B/O	NT_005927	AC027125	15349561	3			AC090883	15178675		113872	0	0	113872
S/G/Y/R/B/O	NT_005927	AC027125	15349561	3			AC090883	15178675		113872	0	0	113872
S/G/Y/R/B/O	NT_005927	AC027125	15349561	3			AC116037	15178675		32016	0	0	32016
S/G/Y/R/B/O	NT_005927	AC027125	15349561	3			AC116037	15178675		32016	0	0	32016
S/G/Y/R/B/O	NT_005927	AC027129	15474416	3	chr3	NT_005927	AC090950	15628489	3	40465	0	0	40465
S/G/Y/R/B/O	NT_005927	AC027129	15474416	3			AC116037	15628489		147743	0	0	147743
S/G/Y/R/B/O	NT_005927	AC027129	15474416	3			AC116037	15628489		147743	0	0	147743
S/G/Y/R/B/O	NT_005927	AC090950	15628489	3	chr3	NT_005927	AC090945	15787239	3	42000	0	0	42000
S/G/Y/R/B/O	NT_005927	AC090950	15628489	3			AC027030	156367770		12655	0	0	12655
S/G/Y/R/B/O	NT_005927	AC090950	15628489	3			AC078774	15474416		16341	8653	7742	32736
S/G/Y/R/B/O	NT_005927	AC090945	15787239	3	chr3	NT_005927	AC090946	15905520	3	4577	0	0	4577
S/G/Y/R/B/O	NT_005927	AC090945	15787239	3			AC078774	156367770		44085	10482	3473	58040
S/G/Y/R/B/O	NT_005927	AC090946	15905520	3	chr3	NT_005927	AC087858	16072145	3	64769	0	0	64769
S/G/Y/R/B/O	NT_005927	AC087858	16072145	3	chr3	NT_005927	AC090953	16187015	3	81559	0	0	81559
S/G/Y/R/B/O	NT_005927	AC090953	16187015	3	chr3	NT_005927	AC090948	16295301	3	93925	0	0	93925
S/G/Y/R/B/O	NT_005927	AC090948	16295301	3	chr3	NT_005927	AC010727	16380994	3	21342	0	0	21342
S/G/Y/R/B/O	NT_005927	AC090948	16295301	3			AC067973	16380994		68852	2727	10488	82067
S/G/Y/R/B/O	NT_005927	AC090948	16295301	3			AC067973	16380994		68852	2727	10488	82067
S/G/Y/R/B/O	NT_005927	AC010727	16380994	3	chr3	NT_005927	AC010139	16507692	3	0	0	200	200
S/G/Y/R/B/O	NT_005927	AC010727	16380994	3			AC067973	16507692		70519	10317	9246	90082
S/G/Y/R/B/O	NT_005927	AC010139	16507692	3	chr3	NT_005927	AC091493	16668899	3	66639	0	0	66639
S/G/Y/R/B/O	NT_005927	AC091493	16668899	3	chr3	NT_005927	AC091291	16789212	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC091493	16668899	3			AC093488	16507692		116191	0	0	116191
S/G/Y/R/B/O	NT_005927	AC091493	16668899	3			AC093488	16507692		116191	0	0	116191
S/G/Y/R/B/O	NT_005927	AC091291	16789212	3	chr3	NT_005927	AC090943	16913834	3	120350	0	0	120350
S/G/Y/R/B/O	NT_005927	AC091291	16789212	3			AC016858	16507692		17779	24221	24561	66561
S/G/Y/R/B/O	NT_005927	AC091291	16789212	3			AC016858	16507692		17779	24221	24561	66561
S/G/Y/R/B/O	NT_005927	AC090943	16913834	3	chr3	NT_005927	AC091491	16956310	3	28638	0	0	28638
S/G/Y/R/B/O	NT_005927	AC090943	16913834	3			AC016858	16913834		17851	36645	22648	77144
S/G/Y/R/B/O	NT_005927	AC090943	16913834	3			AC016858	16913834		17851	36645	22648	77144
S/G/Y/R/B/O	NT_005927	AC090943	16913834	3			AC093488	16956310		39236	0	0	39236
S/G/Y/R/B/O	NT_005927	AC090943	16913834	3			AC093488	16956310		39236	0	0	39236
S/G/Y/R/B/O	NT_005927	AC091491	16956310	3	chr3	NT_005927	AC090644	17080563	3	0	0	0	0
S/G/Y/R/B/O	NT_005927	AC090644	17080563	3	chr3	NT_005927	AC090960	17271549	3	6655	0	0	6655
S/G/Y/R/B/O	NT_005927	AC090644	17080563	3			AC090959	16913834		125101	0	0	125101
S/G/Y/R/B/O	NT_005927	AC090644	17080563	3			AC090959	16913834		125101	0	0	125101
S/G/Y/R/B/O	NT_005927	AC090960	17271549	3
S/G/Y/R/B/O	NT_005927	AC090960	17271549	3			AC090959	17080563		45220	0	0	45220
S/G/Y/R/B/O	NT_005927	AC090960	17271549	3			AC090959	17080563		45220	0	0	45220

NT_028123

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_028123	AC104451	17451618	3	chr3	NT_028123	AC104297	17624721	3	0	0	0	0
S/G/Y/R/B/O	NT_028123	AC104297	17624721	3	chr3	NT_028123	AC132807	17770564	1	74069	0	0	74069
S/G/Y/R/B/O	NT_028123	AC132807	17770564	1

NT_006044

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_006044	AC099543	17877985	3

NT_037562

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037562	AC105765	18044092	3	chr3	NT_037562	AC133009	18220669	3	0	1820	0	1820
S/G/Y/R/B/O	NT_037562	AC105765	18044092	3			AC055826	17624721		75779	9404	1178	86361
S/G/Y/R/B/O	NT_037562	AC133009	18220669	3	chr3	NT_037562	AC105750	18240675	3	3367	0	0	3367
S/G/Y/R/B/O	NT_037562	AC133009	18220669	3			AC055826	18220669		18909	2694	0	21603
S/G/Y/R/B/O	NT_037562	AC105750	18240675	3	chr3	NT_037562	AC105933	18407153	3	50334	0	0	50334
S/G/Y/R/B/O	NT_037562	AC105750	18240675	3			AC055826	18044092		14653	2209	1251	18113
S/G/Y/R/B/O	NT_037562	AC105933	18407153	3	chr3	NT_037562	AC099053	18532289	1	28136	0	0	28136
S/G/Y/R/B/O	NT_037562	AC105933	18407153	3			AC108736	18240675		20183	2836	8933	31952
S/G/Y/R/B/O	NT_037562	AC099053	18532289	1	chr3	NT_037562	AC099538	18612986	3	6386	0	0	6386
S/G/Y/R/B/O	NT_037562	AC099053	18532289	1			AC108736	18407153		13012	11586	9283	33881
S/G/Y/R/B/O	NT_037562	AC099538	18612986	3
S/G/Y/R/B/O	NT_037562	AC099538	18612986	3			AC025292	18407153		33736	0	5192	38928

NT_022517

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022517	AC116098	18793019	1	chr3	NT_022517	AC015542	18855293	3	5397	0	0	5397
S/G/Y/R/B/O	NT_022517	AC116098	18793019	1			AC025292	18855293		41680	686	0	42366
S/G/Y/R/B/O	NT_022517	AC116098	18793019	1			AC080134	18855293		16502	2687	0	19189
S/G/Y/R/B/O	NT_022517	AC015542	18855293	3	chr3	NT_022517	AC114337	19010543	1	30148	0	0	30148
S/G/Y/R/B/O	NT_022517	AC015542	18855293	3			AC080134	18855293		53210	2691	41798	97699
S/G/Y/R/B/O	NT_022517	AC114337	19010543	1	chr3	NT_022517	AC061958	19058471	3	26564	0	0	26564
S/G/Y/R/B/O	NT_022517	AC114337	19010543	1			AC080134	19058471		16782	963	8017	25762
S/G/Y/R/B/O	NT_022517	AC061958	19058471	3	chr3	NT_022517	AC134051	19236188	1	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC134051	19236188	1	chr3	NT_022517	AC134505	19294801	1	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC134051	19236188	1	chr3	NT_022517	AC104182	19387143	3	42557	0	42236	84793
S/G/Y/R/B/O	NT_022517	AC134505	19294801	1	chr3	NT_022517	AC097635	19304789	3	8346	2121	5647	16114
S/G/Y/R/B/O	NT_022517	AC134505	19294801	1			AC022805	19387143		12520	2122	7696	22338
S/G/Y/R/B/O	NT_022517	AC097635	19304789	3	chr3	NT_022517	AC104182	19387143	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC097635	19304789	3			AC022805	19387143		130793	3331	0	134124
S/G/Y/R/B/O	NT_022517	AC097635	19304789	3			AC069207	19387143		27782	4031	0	31813
S/G/Y/R/B/O	NT_022517	AC104182	19387143	3	chr3	NT_022517	AC099057	19588161	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC104182	19387143	3	chr3	NT_022517	AC134051	19236188	1	42557	0	42236	84793
S/G/Y/R/B/O	NT_022517	AC104182	19387143	3			AC022805	19294801		51036	0	0	51036
S/G/Y/R/B/O	NT_022517	AC099057	19588161	3	chr3	NT_022517	AC098972	19752445	3	55267	0	0	55267
S/G/Y/R/B/O	NT_022517	AC099057	19588161	3			AC022805	19294801		17189	0	31461	48650
S/G/Y/R/B/O	NT_022517	AC099057	19588161	3			AC069207	19294801		13821	0	52374	66195
S/G/Y/R/B/O	NT_022517	AC098972	19752445	3	chr3	NT_022517	AC107622	19843171	3	53872	0	0	53872
S/G/Y/R/B/O	NT_022517	AC107622	19843171	3	chr3	NT_022517	AC116096	19947807	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC116096	19947807	3	chr3	NT_022517	AC107621	20064341	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC116096	19947807	3			AC069533	19752445		17667	4193	26319	48179
S/G/Y/R/B/O	NT_022517	AC107621	20064341	3	chr3	NT_022517	AC104835	20191480	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC107621	20064341	3			AC069533	19752445		29200	1945	7996	39141
S/G/Y/R/B/O	NT_022517	AC104835	20191480	3	chr3	NT_022517	AC099055	20377042	3	0	779	0	779
S/G/Y/R/B/O	NT_022517	AC099055	20377042	3	chr3	NT_022517	AC099753	20532225	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC099753	20532225	3	chr3	NT_022517	AC104441	20699469	3	0	1388	0	1388
S/G/Y/R/B/O	NT_022517	AC104441	20699469	3	chr3	NT_022517	AC104183	20862817	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC104183	20862817	3	chr3	NT_022517	AC009429	21032526	3	5319	0	0	5319
S/G/Y/R/B/O	NT_022517	AC009429	21032526	3	chr3	NT_022517	AC096914	21187615	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC009429	21032526	3			AC012089	21032526		53175	0	0	53175
S/G/Y/R/B/O	NT_022517	AC009429	21032526	3			AC021057	21032526		95310	0	43846	139156
S/G/Y/R/B/O	NT_022517	AC009429	21032526	3			AC022049	21032526		96333	0	7984	104317
S/G/Y/R/B/O	NT_022517	AC009429	21032526	3			AC026674	21032526		42555	3945	16253	62753
S/G/Y/R/B/O	NT_022517	AC096914	21187615	3	chr3	NT_022517	AC092504	21290697	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC096914	21187615	3			AC021057	20862817		50060	0	10349	60409
S/G/Y/R/B/O	NT_022517	AC096914	21187615	3			AC022049	20862817		37434	0	0	37434
S/G/Y/R/B/O	NT_022517	AC092504	21290697	3	chr3	NT_022517	AC063935	21358085	1	7762	0	0	7762
S/G/Y/R/B/O	NT_022517	AC063935	21358085	1	chr3	NT_022517	AC023798	21543576	3	6690	0	31133	37823
S/G/Y/R/B/O	NT_022517	AC063935	21358085	1	chr3	NT_034563	AC058333	169521080	3	16195	11282	3219	30696
S/G/Y/R/B/O	NT_022517	AC063935	21358085	1	chr3	NT_022517	AC096918	21678958	3	16169	0	0	16169
S/G/Y/R/B/O	NT_022517	AC063935	21358085	1			AC022500	21358085		30758	0	2721	33479
S/G/Y/R/B/O	NT_022517	AC063935	21358085	1			AC026080	21543576		16893	9219	7910	34022
S/G/Y/R/B/O	NT_022517	AC063935	21358085	1			AC055759	21543576		68665	17563	53141	139369
S/G/Y/R/B/O	NT_022517	AC023798	21543576	3	chr3	NT_022517	AC096918	21678958	3	78455	0	0	78455
S/G/Y/R/B/O	NT_022517	AC096918	21678958	3	chr3	NT_022517	AC092505	21770327	3	10457	0	0	10457
S/G/Y/R/B/O	NT_022517	AC096918	21678958	3	chr3	NT_022517	AC063935	21358085	1	16169	0	0	16169
S/G/Y/R/B/O	NT_022517	AC096918	21678958	3			AC016840	21678958		32028	8748	10327	51103
S/G/Y/R/B/O	NT_022517	AC096918	21678958	3			AC055759	21543576		16198	0	0	16198
S/G/Y/R/B/O	NT_022517	AC092505	21770327	3	chr3	NT_022517	AC098974	21938847	3	22529	0	0	22529
S/G/Y/R/B/O	NT_022517	AC092505	21770327	3			AC016840	21770327		17847	15745	5687	39279
S/G/Y/R/B/O	NT_022517	AC092505	21770327	3			AC022502	21770327		44333	0	22134	66467
S/G/Y/R/B/O	NT_022517	AC092505	21770327	3			AC024732	21770327		51717	0	0	51717
S/G/Y/R/B/O	NT_022517	AC098974	21938847	3	chr3	NT_022517	AC121253	22102037	1	21122	0	1072	22194
S/G/Y/R/B/O	NT_022517	AC098974	21938847	3			AC024732	21938847		103469	0	0	103469
S/G/Y/R/B/O	NT_022517	AC098974	21938847	3			AC025364	21938847		52152	15870	5461	73483
S/G/Y/R/B/O	NT_022517	AC121253	22102037	1	chr3	NT_022517	AC104740	22194236	3	9522	0	4986	14508
S/G/Y/R/B/O	NT_022517	AC121253	22102037	1			AC025364	22102037		53592	5013	2690	61295
S/G/Y/R/B/O	NT_022517	AC104740	22194236	3	chr3	NT_022517	AC092421	22351037	3	0	0	0	0
S/G/Y/R/B/O	NT_022517	AC104740	22194236	3			AC021377	22194236		15833	0	4730	20563
S/G/Y/R/B/O	NT_022517	AC092421	22351037	3	chr3	NT_022517	AC114477	22470913	3	15176	0	0	15176
S/G/Y/R/B/O	NT_022517	AC092421	22351037	3			AC018542	22102037		15170	0	0	15170
S/G/Y/R/B/O	NT_022517	AC092421	22351037	3			AC021377	22102037		12163	0	5550	17713
S/G/Y/R/B/O	NT_022517	AC092421	22351037	3			AC068813	22102037		26815	0	3422	30237
S/G/Y/R/B/O	NT_022517	AC114477	22470913	3	chr3	NT_022517	AC135253	22634924	3	73026	0	0	73026
S/G/Y/R/B/O	NT_022517	AC114477	22470913	3			AC018542	22470913		155464	0	10294	165758
S/G/Y/R/B/O	NT_022517	AC114477	22470913	3			AC020564	22470913		73019	0	0	73019
S/G/Y/R/B/O	NT_022517	AC114477	22470913	3			AC022501	22470913		83704	1937	14819	100460
S/G/Y/R/B/O	NT_022517	AC114477	22470913	3			AC023506	22470913		23911	2226	0	26137
S/G/Y/R/B/O	NT_022517	AC114477	22470913	3			AC068813	22470913		68261	0	60645	128906
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3	chr3	NT_022517	AC099544	22714385	3	0	1998	0	1998
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC018542	22634924		50938	0	10767	61705
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC018542	22634924		50938	0	10767	61705
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC020564	22634924		116837	0	0	116837
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC020564	22634924		116837	0	0	116837
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC022501	22634924		27384	1937	54381	83702
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC022501	22634924		27384	1937	54381	83702
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC023506	22634924		98343	2226	2966	103535
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC023506	22634924		98343	2226	2966	103535
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC055721	22634924		26229	5689	16567	48485
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC055721	22634924		26229	5689	16567	48485
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC068813	22634924		50653	0	0	50653
S/G/Y/R/B/O	NT_022517	AC135253	22634924	3			AC068813	22634924		50653	0	0	50653
S/G/Y/R/B/O	NT_022517	AC099544	22714385	3	chr3	NT_022517	AC135966	22879153	1	27331	0	29649	56980
S/G/Y/R/B/O	NT_022517	AC099544	22714385	3			AC023506	22470913		25567	2747	45899	74213
S/G/Y/R/B/O	NT_022517	AC099544	22714385	3			AC055721	22470913		12397	0	6222	18619
S/G/Y/R/B/O	NT_022517	AC135966	22879153	1	chr3	NT_022517	AC104741	22915679	3	65479	2347	0	67826
S/G/Y/R/B/O	NT_022517	AC104741	22915679	3	chr3	NT_022517	AC121251	23084112	3	4268	0	0	4268
S/G/Y/R/B/O	NT_022517	AC121251	23084112	3	chr3	NT_022517	AC092038	23114377	3	0	1747	0	1747
S/G/Y/R/B/O	NT_022517	AC092038	23114377	3	chr3	NT_022517	AC116992	23283577	3	104258	0	0	104258
S/G/Y/R/B/O	NT_022517	AC116992	23283577	3	chr3	NT_022517	AC113932	23383481	3	86357	0	0	86357
S/G/Y/R/B/O	NT_022517	AC113932	23383481	3	chr3	NT_022517	AC020626	23417614	3	73705	0	0	73705
S/G/Y/R/B/O	NT_022517	AC020626	23417614	3	chr3	NT_022517	AC124914	23587960	3	9101	0	0	9101
S/G/Y/R/B/O	NT_022517	AC020626	23417614	3			AC079840	23283577		55891	2487	16334	74712
S/G/Y/R/B/O	NT_022517	AC124914	23587960	3	chr3	NT_022517	AC098971	23699400	3	67123	0	0	67123
S/G/Y/R/B/O	NT_022517	AC124914	23587960	3			AC079840	23417614		26548	971	2389	29908
S/G/Y/R/B/O	NT_022517	AC098971	23699400	3	chr3	NT_022517	AC093927	23874809	3	34150	0	0	34150
S/G/Y/R/B/O	NT_022517	AC093927	23874809	3	chr3	NT_022517	AC099054	24023791	3	117061	0	0	117061
S/G/Y/R/B/O	NT_022517	AC093927	23874809	3			AC068890	23587960		91062	8479	13342	112883
S/G/Y/R/B/O	NT_022517	AC099054	24023791	3	chr3	NT_022517	AC112217	24108046	3	61680	0	0	61680
S/G/Y/R/B/O	NT_022517	AC099054	24023791	3			AC068890	161601954		66650	8492	13156	88298
S/G/Y/R/B/O	NT_022517	AC112217	24108046	3	chr3	NT_022517	AC012087	24202887	3	54371	0	0	54371
S/G/Y/R/B/O	NT_022517	AC012087	24202887	3	chr3	NT_022517	AC103585	24343063	3	7972	0	0	7972
S/G/Y/R/B/O	NT_022517	AC012087	24202887	3			AC093574	24023791		90921	0	0	90921
S/G/Y/R/B/O	NT_022517	AC103585	24343063	3	chr3	NT_022517	AC133680	24462194	3	57493	0	0	57493
S/G/Y/R/B/O	NT_022517	AC103585	24343063	3	chr12	NT_009455	AC136467	132892499	1	31944	2067	0	34011
S/G/Y/R/B/O	NT_022517	AC103585	24343063	3			AC093574	24202887		69030	0	0	69030
S/G/Y/R/B/O	NT_022517	AC133680	24462194	3	chr3	NT_022517	AC105900	24592564	3	49950	0	0	49950
S/G/Y/R/B/O	NT_022517	AC133680	24462194	3	chr12	NT_009455	AC136467	132892499	1	75095	2067	16420	93582
S/G/Y/R/B/O	NT_022517	AC133680	24462194	3			AC026673	132892499		26935	0	0	26935
S/G/Y/R/B/O	NT_022517	AC133680	24462194	3			AC026673	132892499		26935	0	0	26935
S/G/Y/R/B/O	NT_022517	AC133680	24462194	3			AC116097	24690989		13629	2148	375	16152
S/G/Y/R/B/O	NT_022517	AC105900	24592564	3	chr3	NT_022517	AC110418	24690989	3	100427	0	0	100427
S/G/Y/R/B/O	NT_022517	AC105900	24592564	3	chr12	NT_009455	AC136467	132892499	1	45808	1645	29615	77068
S/G/Y/R/B/O	NT_022517	AC105900	24592564	3			AC116097	24690989		66464	2148	0	68612
S/G/Y/R/B/O	NT_022517	AC110418	24690989	3	chr3	NT_022517	AC092422	24739475	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022517	AC110418	24690989	3			AC116097	24592564		52836	0	63	52899
S/G/Y/R/B/O	NT_022517	AC092422	24739475	3
S/G/Y/R/B/O	NT_022517	AC092422	24739475	3			AC012133	132892499		42413	0	0	42413

NT_005762

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005762	AC135965	24936113	3	chr3	NT_005762	AC133797	24988612	3	0	0	0	0
S/G/Y/R/B/O	NT_005762	AC135965	24936113	3	chr3	NT_005762	AC098477	25025743	3	99427	0	0	99427
S/G/Y/R/B/O	NT_005762	AC135965	24936113	3			AC012133	24690989		137621	2148	6802	146571
S/G/Y/R/B/O	NT_005762	AC133797	24988612	3	chr3	NT_005762	AC098477	25025743	3	0	0	0	0
S/G/Y/R/B/O	NT_005762	AC098477	25025743	3	chr3	NT_005762	AC133141	25224211	3	4145	0	0	4145
S/G/Y/R/B/O	NT_005762	AC098477	25025743	3	chr3	NT_005762	AC135965	24936113	3	99427	0	0	99427
S/G/Y/R/B/O	NT_005762	AC098477	25025743	3			AC012133	25025743		83408	0	6800	90208
S/G/Y/R/B/O	NT_005762	AC133141	25224211	3	chr3	NT_005762	AC093416	25288764	3	0	1860	0	1860
S/G/Y/R/B/O	NT_005762	AC093416	25288764	3	chr3	NT_005762	AC092798	25478072	3	0	0	25189	25189
S/G/Y/R/B/O	NT_005762	AC093416	25288764	3			AC074287	25025743		105840	0	59722	165562
S/G/Y/R/B/O	NT_005762	AC092798	25478072	3	chr3	NT_005762	AC103588	25608914	3	0	0	44635	44635
S/G/Y/R/B/O	NT_005762	AC092798	25478072	3			AC092348	25224211		33268	2642	7258	43168
S/G/Y/R/B/O	NT_005762	AC103588	25608914	3	chr3	NT_005762	AC093411	25772778	3	107464	0	0	107464
S/G/Y/R/B/O	NT_005762	AC103588	25608914	3			AC090100	25608914		16483	0	39656	56139
S/G/Y/R/B/O	NT_005762	AC103588	25608914	3			AC092348	25608914		51194	0	0	51194
S/G/Y/R/B/O	NT_005762	AC093411	25772778	3
S/G/Y/R/B/O	NT_005762	AC093411	25772778	3			AC090100	25772778		82512	0	39667	122179

NT_037564

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037564	AC098615	25848795	3	chr3	NT_037564	AC099754	26009570	3	6684	0	0	6684
S/G/Y/R/B/O	NT_037564	AC099754	26009570	3	chr3	NT_037564	AC114877	26206880	3	115094	0	0	115094
S/G/Y/R/B/O	NT_037564	AC114877	26206880	3	chr3	NT_037564	AC103922	26207189	3	63556	0	0	63556
S/G/Y/R/B/O	NT_037564	AC114877	26206880	3	chr3	NT_037564	AC027438	26371668	1	15790	0	0	15790
S/G/Y/R/B/O	NT_037564	AC103922	26207189	3	chr3	NT_037564	AC027438	26371668	1	72728	0	1232	73960
S/G/Y/R/B/O	NT_037564	AC027438	26371668	1	chr3	NT_037564	AC093558	26408138	3	4534	2703	4262	11499
S/G/Y/R/B/O	NT_037564	AC027438	26371668	1	chr3	NT_037564	AC114877	26206880	3	15790	0	0	15790
S/G/Y/R/B/O	NT_037564	AC093558	26408138	3	chr3	NT_037564	AC098931	26546369	3	22996	0	0	22996
S/G/Y/R/B/O	NT_037564	AC093558	26408138	3			AC016958	26206880		43014	0	55719	98733
S/G/Y/R/B/O	NT_037564	AC093558	26408138	3			AC026340	26206880		25365	6604	7723	39692
S/G/Y/R/B/O	NT_037564	AC098931	26546369	3	chr3	NT_037564	AC093555	26702454	3	3293	0	0	3293
S/G/Y/R/B/O	NT_037564	AC098931	26546369	3			AC016958	26546369		10436	0	0	10436
S/G/Y/R/B/O	NT_037564	AC093555	26702454	3	chr3	NT_037564	AC133142	26862945	3	2624	0	0	2624
S/G/Y/R/B/O	NT_037564	AC133142	26862945	3	chr3	NT_037564	AC099535	26869885	3	10083	0	0	10083
S/G/Y/R/B/O	NT_037564	AC099535	26869885	3
S/G/Y/R/B/O	NT_037564	AC099535	26869885	3			AC025612	26869885		20015	0	13604	33619
S/G/Y/R/B/O	NT_037564	AC099535	26869885	3			AC084418	26869885		22774	3523	19405	45702

NT_005646

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005646	AC098614	27061605	3	chr3	NT_005646	AC098973	27261984	3	24192	0	0	24192
S/G/Y/R/B/O	NT_005646	AC098614	27061605	3			AC025612	26862945		38008	5101	22920	66029
S/G/Y/R/B/O	NT_005646	AC098614	27061605	3			AC084418	26862945		77799	3574	37696	119069
S/G/Y/R/B/O	NT_005646	AC098973	27261984	3	chr3	NT_005646	AC092415	27453951	3	0	0	0	0
S/G/Y/R/B/O	NT_005646	AC098973	27261984	3			AC022187	27261984		40859	5704	20398	66961
S/G/Y/R/B/O	NT_005646	AC092415	27453951	3	chr3	NT_005646	AC121254	27635614	3	4008	0	0	4008
S/G/Y/R/B/O	NT_005646	AC092415	27453951	3			AC022187	27061605		25269	18720	3446	47435
S/G/Y/R/B/O	NT_005646	AC121254	27635614	3	chr3	NT_005646	AC092503	27657065	3	9123	0	0	9123
S/G/Y/R/B/O	NT_005646	AC092503	27657065	3	chr3	NT_005646	AC098616	27843510	3	103252	0	0	103252
S/G/Y/R/B/O	NT_005646	AC098616	27843510	3	chr3	NT_005646	AC093142	27899783	1	42196	0	0	42196
S/G/Y/R/B/O	NT_005646	AC093142	27899783	1	chr3	NT_005646	AC109586	28052046	3	0	0	0	0
S/G/Y/R/B/O	NT_005646	AC109586	28052046	3	chr3	NT_005646	AC093412	28151281	3	78040	0	0	78040
S/G/Y/R/B/O	NT_005646	AC093412	28151281	3	chr3	NT_005646	AC098970	28328954	3	0	0	10846	10846
S/G/Y/R/B/O	NT_005646	AC093412	28151281	3	chr11	NT_009307	AC127033	17592632	2	17025	0	0	17025
S/G/Y/R/B/O	NT_005646	AC093412	28151281	3	chr11	NT_009307	AC127033	17592632	2	17025	0	0	17025
S/G/Y/R/B/O	NT_005646	AC098970	28328954	3	chr3	NT_005646	AC097361	28471448	3	29347	0	0	29347
S/G/Y/R/B/O	NT_005646	AC097361	28471448	3	chr3	NT_005646	AC122177	28471452	3	0	0	0	0
S/G/Y/R/B/O	NT_005646	AC097361	28471448	3			AC018428	28471448		49620	2782	0	52402
S/G/Y/R/B/O	NT_005646	AC122177	28471452	3	chr3	NT_005646	AC130473	28639360	3	3050	0	0	3050
S/G/Y/R/B/O	NT_005646	AC122177	28471452	3			AC018428	28328954		137117	2782	0	139899
S/G/Y/R/B/O	NT_005646	AC130473	28639360	3	chr3	NT_005646	AC012262	28681719	3	5072	0	0	5072
S/G/Y/R/B/O	NT_005646	AC012262	28681719	3	chr3	NT_005646	AC098650	28835812	1	0	2705	0	2705
S/G/Y/R/B/O	NT_005646	AC098650	28835812	1	chr3	NT_005646	AC092501	28907263	3	91306	0	0	91306
S/G/Y/R/B/O	NT_005646	AC098650	28835812	1	chr3	NT_005646	AC021068	29066594	3	10901	0	0	10901
S/G/Y/R/B/O	NT_005646	AC092501	28907263	3	chr3	NT_005646	AC021068	29066594	3	69931	0	0	69931
S/G/Y/R/B/O	NT_005646	AC021068	29066594	3	chr3	NT_005646	AC092795	29155802	3	21848	0	0	21848
S/G/Y/R/B/O	NT_005646	AC021068	29066594	3	chr3	NT_005646	AC098650	28835812	1	10901	0	0	10901
S/G/Y/R/B/O	NT_005646	AC092795	29155802	3	chr3	NT_005646	AC092796	29276466	3	31970	0	0	31970
S/G/Y/R/B/O	NT_005646	AC092796	29276466	3	chr3	NT_005646	AC099048	29395697	3	43124	0	0	43124
S/G/Y/R/B/O	NT_005646	AC099048	29395697	3	chr3	NT_005646	AC097633	29503787	3	60309	0	0	60309
S/G/Y/R/B/O	NT_005646	AC099048	29395697	3			AC084000	29395697		63664	7546	3411	74621
S/G/Y/R/B/O	NT_005646	AC097633	29503787	3	chr3	NT_005646	AC124043	29602825	3	98808	0	0	98808
S/G/Y/R/B/O	NT_005646	AC097633	29503787	3			AC084000	29503787		15415	10117	12045	37577
S/G/Y/R/B/O	NT_005646	AC124043	29602825	3
S/G/Y/R/B/O	NT_005646	AC124043	29602825	3			AC011724	29602825		55768	1983	0	57751
S/G/Y/R/B/O	NT_005646	AC124043	29602825	3			AC084000	29602825		18067	4539	10478	33084

NT_034532

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034532	AC026959	29674457	1	chr3	NT_034532	AC096921	29731428	3	35400	1701	0	37101
S/G/Y/R/B/O	NT_034532	AC026959	29674457	1	chr3	NT_034532	AC095029	30240274	3	44990	0	1440	46430
S/G/Y/R/B/O	NT_034532	AC026959	29674457	1			AC021650	29503787		67105	5516	6178	78799
S/G/Y/R/B/O	NT_034532	AC096921	29731428	3	chr3	NT_034532	AC116035	29918661	3	14173	0	0	14173
S/G/Y/R/B/O	NT_034532	AC096921	29731428	3			AC011040	29731428		154057	2077	3552	159686
S/G/Y/R/B/O	NT_034532	AC096921	29731428	3			AC021650	29731428		61359	3889	9136	74384
S/G/Y/R/B/O	NT_034532	AC116035	29918661	3	chr3	NT_034532	AC025614	30027122	3	0	0	0	0
S/G/Y/R/B/O	NT_034532	AC025614	30027122	3	chr3	NT_034532	AC095029	30240274	3	0	0	0	0
S/G/Y/R/B/O	NT_034532	AC095029	30240274	3	chr3	NT_034532	AC107624	30330043	3	62005	0	0	62005
S/G/Y/R/B/O	NT_034532	AC095029	30240274	3	chr3	NT_034532	AC026959	29674457	1	44990	0	1440	46430
S/G/Y/R/B/O	NT_034532	AC107624	30330043	3	chr3	NT_034532	AC098647	30500325	3	23246	0	0	23246
S/G/Y/R/B/O	NT_034532	AC107624	30330043	3			AC023597	30330043		35888	0	22338	58226
S/G/Y/R/B/O	NT_034532	AC107624	30330043	3			AC099779	30500325		99752	0	0	99752
S/G/Y/R/B/O	NT_034532	AC098647	30500325	3	chr3	NT_034532	AC115283	30636588	3	37881	0	0	37881
S/G/Y/R/B/O	NT_034532	AC098647	30500325	3			AC023597	30500325		79502	0	19269	98771
S/G/Y/R/B/O	NT_034532	AC098647	30500325	3			AC099779	30500325		121644	0	0	121644
S/G/Y/R/B/O	NT_034532	AC115283	30636588	3	chr3	NT_034532	AC099540	30723994	3	65000	0	0	65000
S/G/Y/R/B/O	NT_034532	AC115283	30636588	3			AC023597	30636588		20934	0	0	20934
S/G/Y/R/B/O	NT_034532	AC099540	30723994	3	chr3	NT_034532	AC104643	30891793	3	11164	0	0	11164
S/G/Y/R/B/O	NT_034532	AC104643	30891793	3	chr3	NT_034532	AC092024	31051320	3	22318	0	0	22318
S/G/Y/R/B/O	NT_034532	AC092024	31051320	3	chr3	NT_034532	AC107620	31206242	3	89945	0	0	89945
S/G/Y/R/B/O	NT_034532	AC107620	31206242	3	chr3	NT_034532	AC108485	31250819	3	65476	0	0	65476
S/G/Y/R/B/O	NT_034532	AC108485	31250819	3	chr3	NT_034532	AC094019	31400827	3	16231	0	0	16231
S/G/Y/R/B/O	NT_034532	AC108485	31250819	3			AC023523	31250819		16230	0	0	16230
S/G/Y/R/B/O	NT_034532	AC094019	31400827	3	chr3	NT_034532	AC097639	31536589	3	0	0	0	0
S/G/Y/R/B/O	NT_034532	AC094019	31400827	3			AC023523	31206242		82573	2103	15941	100617
S/G/Y/R/B/O	NT_034532	AC097639	31536589	3	chr3	NT_034532	AC103558	31713973	3	90315	0	0	90315
S/G/Y/R/B/O	NT_034532	AC103558	31713973	3	chr3	NT_034532	AC098475	31798195	3	84189	0	0	84189
S/G/Y/R/B/O	NT_034532	AC103558	31713973	3			AC012520	31713973		66163	0	15630	81793
S/G/Y/R/B/O	NT_034532	AC103558	31713973	3			AC078781	31713973		20268	0	14085	34353
S/G/Y/R/B/O	NT_034532	AC098475	31798195	3	chr3	NT_034532	AC104306	31866912	3	18991	0	0	18991
S/G/Y/R/B/O	NT_034532	AC098475	31798195	3			AC011314	31798195		18731	0	0	18731
S/G/Y/R/B/O	NT_034532	AC098475	31798195	3			AC012520	31798195		84115	0	15641	99756
S/G/Y/R/B/O	NT_034532	AC098475	31798195	3			AC046140	31798195		16373	0	39679	56052
S/G/Y/R/B/O	NT_034532	AC098475	31798195	3			AC078781	31798195		53841	0	14062	67903
S/G/Y/R/B/O	NT_034532	AC104306	31866912	3
S/G/Y/R/B/O	NT_034532	AC104306	31866912	3			AC011314	31866912		99841	2749	9110	111700
S/G/Y/R/B/O	NT_034532	AC104306	31866912	3			AC026763	31866912		47262	3852	2779	53893
S/G/Y/R/B/O	NT_034532	AC104306	31866912	3			AC046140	31866912		39688	4380	13648	57716
S/G/Y/R/B/O	NT_034532	AC104306	31866912	3			AC078781	31866912		34510	0	4266	38776

NT_005580

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005580	AC112211	32285014	3	chr3	NT_005580	AC123900	32467523	3	21810	0	0	21810
S/G/Y/R/B/O	NT_005580	AC123900	32467523	3	chr3	NT_005580	AC122176	32612190	3	37668	0	0	37668
S/G/Y/R/B/O	NT_005580	AC122176	32612190	3	chr3	NT_005580	AC093114	32750883	3	73875	0	0	73875
S/G/Y/R/B/O	NT_005580	AC122176	32612190	3	chr3	NT_005580	AC117943	32894295	1	38489	4450	2192	45131
S/G/Y/R/B/O	NT_005580	AC122176	32612190	3			AC069423	32612190		62834	0	10014	72848
S/G/Y/R/B/O	NT_005580	AC093114	32750883	3	chr3	NT_005580	AC132515	32844229	1	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC093114	32750883	3	chr3	NT_005580	AC117943	32894295	1	25031	4450	11257	40738
S/G/Y/R/B/O	NT_005580	AC093114	32750883	3			AC069423	32467523		56152	2369	25112	83633
S/G/Y/R/B/O	NT_005580	AC132515	32844229	1	chr3	NT_005580	AC113170	32858347	1	22043	2126	33729	57898
S/G/Y/R/B/O	NT_005580	AC132515	32844229	1	chr3	NT_005580	AC117943	32894295	1	34973	0	8679	43652
S/G/Y/R/B/O	NT_005580	AC132515	32844229	1			AC069423	32612190		10205	2385	24152	36742
S/G/Y/R/B/O	NT_005580	AC113170	32858347	1	chr3	NT_005580	AC117943	32894295	1	0	0	3798	3798
S/G/Y/R/B/O	NT_005580	AC117943	32894295	1	chr3	NT_005580	AC112220	33047207	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC117943	32894295	1	chr3	NT_005580	AC093114	32750883	3	25031	4450	11257	40738
S/G/Y/R/B/O	NT_005580	AC117943	32894295	1	chr3	NT_005580	AC122176	32612190	3	38489	4450	2192	45131
S/G/Y/R/B/O	NT_005580	AC117943	32894295	1	chr3	NT_005580	AC132515	32844229	1	34973	0	8679	43652
S/G/Y/R/B/O	NT_005580	AC117943	32894295	1			AC069423	32844229		33627	5667	15024	54318
S/G/Y/R/B/O	NT_005580	AC112220	33047207	3	chr3	NT_005580	AC123901	33199434	3	44501	0	0	44501
S/G/Y/R/B/O	NT_005580	AC112220	33047207	3			AC113168	32844229		126978	0	0	126978
S/G/Y/R/B/O	NT_005580	AC123901	33199434	3	chr3	NT_005580	AC099051	33372331	3	58673	0	0	58673
S/G/Y/R/B/O	NT_005580	AC099051	33372331	3	chr3	NT_005580	AC123023	33488021	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC099051	33372331	3			AC013569	33047207		64411	0	28036	92447
S/G/Y/R/B/O	NT_005580	AC123023	33488021	3	chr3	NT_005580	AC092023	33636201	3	50891	0	0	50891
S/G/Y/R/B/O	NT_005580	AC123023	33488021	3			AC013569	33199434		42140	1813	15424	59377
S/G/Y/R/B/O	NT_005580	AC092023	33636201	3	chr3	NT_005580	AC099776	33750009	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC099776	33750009	3	chr3	NT_005580	AC018359	33874583	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC018359	33874583	3	chr3	NT_005580	AC007483	33995797	3	42224	0	0	42224
S/G/Y/R/B/O	NT_005580	AC018359	33874583	3			AC092420	33995797		124272	0	0	124272
S/G/Y/R/B/O	NT_005580	AC007483	33995797	3	chr3	NT_005580	AC092054	34129747	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC007483	33995797	3			AC092420	33874583		101723	0	0	101723
S/G/Y/R/B/O	NT_005580	AC092054	34129747	3	chr3	NT_005580	AC112223	34279938	3	76782	0	0	76782
S/G/Y/R/B/O	NT_005580	AC092054	34129747	3			AC024079	33874583		19386	4256	17785	41427
S/G/Y/R/B/O	NT_005580	AC112223	34279938	3	chr3	NT_005580	AC093557	34369740	3	48556	0	0	48556
S/G/Y/R/B/O	NT_005580	AC093557	34369740	3	chr3	NT_005580	AC109585	34447282	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC093557	34369740	3			AC108486	34369740		79011	0	655	79666
S/G/Y/R/B/O	NT_005580	AC109585	34447282	3	chr3	NT_005580	AC096916	34639446	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC096916	34639446	3	chr3	NT_005580	AC092052	34708490	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC096916	34639446	3			AC018543	34279938		86675	0	27495	114170
S/G/Y/R/B/O	NT_005580	AC092052	34708490	3	chr3	NT_005580	AC016943	34911694	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC092052	34708490	3			AC018543	34279938		13220	0	0	13220
S/G/Y/R/B/O	NT_005580	AC092052	34708490	3			AC019329	34279938		15617	0	36853	52470
S/G/Y/R/B/O	NT_005580	AC016943	34911694	3	chr3	NT_005580	AC133143	35085228	3	3507	0	0	3507
S/G/Y/R/B/O	NT_005580	AC133143	35085228	3	chr3	NT_005580	AC104308	35089498	3	2644	0	0	2644
S/G/Y/R/B/O	NT_005580	AC104308	35089498	3	chr3	NT_005580	AC124974	35225620	3	16202	0	0	16202
S/G/Y/R/B/O	NT_005580	AC124974	35225620	3	chr3	NT_005580	AC124153	35242636	3	0	1866	0	1866
S/G/Y/R/B/O	NT_005580	AC124153	35242636	3	chr3	NT_005580	AC105901	35407027	3	0	1301	0	1301
S/G/Y/R/B/O	NT_005580	AC124153	35242636	3			AC018855	35242636		48386	0	21525	69911
S/G/Y/R/B/O	NT_005580	AC105901	35407027	3	chr3	NT_005580	AC126117	35593251	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC126117	35593251	3	chr3	NT_005580	AC092051	35664186	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AC092051	35664186	3	chr3	NT_005580	AC098648	35847777	3	44659	0	0	44659
S/G/Y/R/B/O	NT_005580	AC098648	35847777	3	chr3	NT_005580	AC105749	35955041	3	0	0	5297	5297
S/G/Y/R/B/O	NT_005580	AC098648	35847777	3			AC068979	35847777		46337	0	9202	55539
S/G/Y/R/B/O	NT_005580	AC105749	35955041	3	chr3	NT_005580	AC097360	36149759	3	142628	0	0	142628
S/G/Y/R/B/O	NT_005580	AC105749	35955041	3			AC068979	35955041		36475	6920	1963	45358
S/G/Y/R/B/O	NT_005580	AC097360	36149759	3	chr3	NT_005580	AC011816	36173193	3	9450	0	0	9450
S/G/Y/R/B/O	NT_005580	AC097360	36149759	3			AC068979	36173193		30381	0	743	31124
S/G/Y/R/B/O	NT_005580	AC011816	36173193	3	chr3	NT_005580	AC006583	36333056	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005580	AC006583	36333056	3	chr3	NT_005580	AC126118	36431832	3	0	1593	0	1593
S/G/Y/R/B/O	NT_005580	AC006583	36333056	3			AL450991	36431832		15973	0	0	15973
S/G/Y/R/B/O	NT_005580	AC006583	36333056	3			AL450991	36431832		15973	0	0	15973
S/G/Y/R/B/O	NT_005580	AC126118	36431832	3	chr3	NT_005580	AC097359	36497592	3	3224	0	0	3224
S/G/Y/R/B/O	NT_005580	AC126118	36431832	3			AL450991	36497592		49057	0	0	49057
S/G/Y/R/B/O	NT_005580	AC097359	36497592	3	chr3	NT_005580	AP000493	36638565	3	42740	0	0	42740
S/G/Y/R/B/O	NT_005580	AC097359	36497592	3			AC136290	36431832		15755	0	58676	74431
S/G/Y/R/B/O	NT_005580	AC097359	36497592	3			AL450991	36431832		53714	2595	0	56309
S/G/Y/R/B/O	NT_005580	AP000493	36638565	3	chr3	NT_005580	AP000494	36838565	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AP000493	36638565	3			AC009813	36638565		77716	0	1531	79247
S/G/Y/R/B/O	NT_005580	AP000493	36638565	3			AC092055	36638565		124344	0	0	124344
S/G/Y/R/B/O	NT_005580	AP000493	36638565	3			AC136290	36497592		44092	0	0	44092
S/G/Y/R/B/O	NT_005580	AP000494	36838565	3	chr3	NT_005580	AP000495	37038565	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AP000494	36838565	3			AC009813	36497592		46206	0	0	46206
S/G/Y/R/B/O	NT_005580	AP000494	36838565	3			AC092055	36497592		28307	0	0	28307
S/G/Y/R/B/O	NT_005580	AP000494	36838565	3			AC093415	36497592		17313	0	0	17313
S/G/Y/R/B/O	NT_005580	AP000495	37038565	3	chr3	NT_005580	AP000496	37138565	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AP000495	37038565	3			AC093415	36497592		99420	0	0	99420
S/G/Y/R/B/O	NT_005580	AP000496	37138565	3	chr3	NT_005580	AP000497	37238565	3	0	0	0	0
S/G/Y/R/B/O	NT_005580	AP000496	37138565	3			AC046188	36497592		15226	15767	18676	49669
S/G/Y/R/B/O	NT_005580	AP000496	37138565	3			AC093415	36497592		77876	0	0	77876
S/G/Y/R/B/O	NT_005580	AP000496	37138565	3			AC105752	36497592		60300	0	0	60300
S/G/Y/R/B/O	NT_005580	AP000497	37238565	3	chr3	NT_005580	AB026898	37385161	3	13510	0	0	13510
S/G/Y/R/B/O	NT_005580	AP000497	37238565	3			AC105752	37385161		81493	0	0	81493
S/G/Y/R/B/O	NT_005580	AB026898	37385161	3	chr3	NT_005580	AP000500	37622625	3	37256	0	0	37256
S/G/Y/R/B/O	NT_005580	AB026898	37385161	3			AC026346	37385161		45240	2083	54404	101727
S/G/Y/R/B/O	NT_005580	AB026898	37385161	3			AC055722	37385161		17121	0	47793	64914
S/G/Y/R/B/O	NT_005580	AP000500	37622625	3
S/G/Y/R/B/O	NT_005580	AP000500	37622625	3			AC016156	37385161		20300	0	0	20300
S/G/Y/R/B/O	NT_005580	AP000500	37622625	3			AC055722	37385161		22954	0	31440	54394
S/G/Y/R/B/O	NT_005580	AP000500	37622625	3			AC092417	37385161		166770	0	0	166770

NT_034533

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034533	AC093116	37849733	3
S/G/Y/R/B/O	NT_034533	AC093116	37849733	3			AC026346	37385161		55539	2029	45788	103356

NT_005498

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005498	AC073219	38041957	1	chr3	NT_005498	AC123903	38102083	3	0	2214	1182	3396
S/G/Y/R/B/O	NT_005498	AC073219	38041957	1	chr3	NT_005498	AC092053	38393298	3	34397	0	4732	39129
S/G/Y/R/B/O	NT_005498	AC123903	38102083	3	chr3	NT_005498	AC116038	38215454	3	0	0	0	0
S/G/Y/R/B/O	NT_005498	AC116038	38215454	3	chr3	NT_005498	AC092053	38393298	3	0	0	0	0
S/G/Y/R/B/O	NT_005498	AC092053	38393298	3	chr3	NT_005498	AC104850	38569872	3	80351	0	0	80351
S/G/Y/R/B/O	NT_005498	AC092053	38393298	3	chr3	NT_005498	AC073219	38041957	1	34397	0	4732	39129
S/G/Y/R/B/O	NT_005498	AC104850	38569872	3	chr3	NT_005498	AC099332	38663093	3	0	0	0	0
S/G/Y/R/B/O	NT_005498	AC099332	38663093	3	chr3	NT_005498	AC092058	38738398	3	42159	0	0	42159
S/G/Y/R/B/O	NT_005498	AC092058	38738398	3	chr3	NT_005498	AC104444	38896961	3	75250	0	0	75250
S/G/Y/R/B/O	NT_005498	AC104444	38896961	3	chr3	NT_005498	AC104163	38982593	3	57229	0	0	57229
S/G/Y/R/B/O	NT_005498	AC104163	38982593	3	chr3	NT_005498	AC104188	39094681	3	73864	0	0	73864
S/G/Y/R/B/O	NT_005498	AC104188	39094681	3	chr3	NT_005498	AC104185	39184991	3	0	0	0	0
S/G/Y/R/B/O	NT_005498	AC104185	39184991	3	chr3	NT_005498	AC110718	39275686	3	0	0	0	0
S/G/Y/R/B/O	NT_005498	AC110718	39275686	3	chr3	NT_005498	AC099557	39328113	3	17310	0	0	17310
S/G/Y/R/B/O	NT_005498	AC099557	39328113	3
S/G/Y/R/B/O	NT_005498	AC099557	39328113	3			AC099331	39328113		134094	0	0	134094

NT_037565

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037565	AC130439	39517158	3	chr3	NT_037565	AC104186	39562228	3	0	0	0	0
S/G/Y/R/B/O	NT_037565	AC104186	39562228	3	chr3	NT_037565	AC121754	39746544	1	0	0	0	0
S/G/Y/R/B/O	NT_037565	AC121754	39746544	1	chr3	NT_037565	AC122683	39793618	3	0	0	22859	22859
S/G/Y/R/B/O	NT_037565	AC122683	39793618	3	chr3	NT_037565	AC116441	39936389	3	58545	0	0	58545
S/G/Y/R/B/O	NT_037565	AC116441	39936389	3	chr3	NT_037565	AC099560	40020135	3	83279	0	0	83279
S/G/Y/R/B/O	NT_037565	AC099560	40020135	3	chr3	NT_037565	AC099541	40129024	3	0	0	0	0
S/G/Y/R/B/O	NT_037565	AC099560	40020135	3			AC068861	39793618		65937	9187	6798	81922
S/G/Y/R/B/O	NT_037565	AC099541	40129024	3	chr3	NT_037565	AC104189	40247043	3	56636	0	0	56636
S/G/Y/R/B/O	NT_037565	AC099541	40129024	3			AC068861	39936389		31250	13720	12263	57233
S/G/Y/R/B/O	NT_037565	AC104189	40247043	3	chr3	NT_037565	AC009743	40369729	3	84590	0	0	84590
S/G/Y/R/B/O	NT_037565	AC104189	40247043	3			AC006253	40247043		76725	0	0	76725
S/G/Y/R/B/O	NT_037565	AC009743	40369729	3	chr3	NT_037565	AC104307	40444794	3	16383	0	0	16383
S/G/Y/R/B/O	NT_037565	AC009743	40369729	3			AC006253	40129024		126296	0	0	126296
S/G/Y/R/B/O	NT_037565	AC104307	40444794	3	chr3	NT_037565	AC097356	40611050	3	40559	0	0	40559
S/G/Y/R/B/O	NT_037565	AC104307	40444794	3			AL359456	40611050		38266	0	40654	78920
S/G/Y/R/B/O	NT_037565	AC097356	40611050	3	chr3	NT_037565	AC099059	40717753	3	0	0	0	0
S/G/Y/R/B/O	NT_037565	AC097356	40611050	3			AL359456	40444794		17550	2023	24852	44425
S/G/Y/R/B/O	NT_037565	AC099059	40717753	3	chr3	NT_037565	AC099537	40860073	3	11483	0	0	11483
S/G/Y/R/B/O	NT_037565	AC099537	40860073	3	chr3	NT_037565	AC104305	41005088	3	0	0	0	0
S/G/Y/R/B/O	NT_037565	AC099537	40860073	3			AC078812	40860073		19003	0	29157	48160
S/G/Y/R/B/O	NT_037565	AC104305	41005088	3	chr3	NT_037565	AC068927	41149100	1	5229	0	0	5229
S/G/Y/R/B/O	NT_037565	AC104305	41005088	3			AC068826	40717753		22484	0	3738	26222
S/G/Y/R/B/O	NT_037565	AC068927	41149100	1	chr3	NT_037565	AC093414	41255578	1	17409	2738	5887	26034
S/G/Y/R/B/O	NT_037565	AC068927	41149100	1			AC068826	41149100		51583	5831	9632	67046
S/G/Y/R/B/O	NT_037565	AC093414	41255578	1

NT_005825

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005825	AC124044	41462103	3	chr3	NT_005825	AC092048	41489321	3	2364	0	0	2364
S/G/Y/R/B/O	NT_005825	AC092048	41489321	3	chr3	NT_005825	AC006060	41530108	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC006060	41530108	3	chr3	NT_005825	AC092047	41639410	3	0	0	25477	25477
S/G/Y/R/B/O	NT_005825	AC006060	41530108	3			AC048329	41462103		10101	0	5682	15783
S/G/Y/R/B/O	NT_005825	AC092047	41639410	3	chr3	NT_005825	AC006059	41834151	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC092047	41639410	3			AC010169	41530108		109742	0	0	109742
S/G/Y/R/B/O	NT_005825	AC092047	41639410	3			AC048329	41530108		57575	0	56952	114527
S/G/Y/R/B/O	NT_005825	AC092047	41639410	3			AC092041	53699840		32192	0	0	32192
S/G/Y/R/B/O	NT_005825	AC006059	41834151	3	chr3	NT_005825	AC099329	41989923	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC006059	41834151	3			AC022064	41489321		125732	1859	2740	130331
S/G/Y/R/B/O	NT_005825	AC099329	41989923	3	chr3	NT_005825	AC092043	42112652	3	94945	0	0	94945
S/G/Y/R/B/O	NT_005825	AC099329	41989923	3			AC022064	53699840		59843	0	0	59843
S/G/Y/R/B/O	NT_005825	AC099329	41989923	3			AC092041	53699840		28404	0	0	28404
S/G/Y/R/B/O	NT_005825	AC092043	42112652	3	chr3	NT_005825	AC092042	42193759	3	11259	0	0	11259
S/G/Y/R/B/O	NT_005825	AC092043	42112652	3			AC026352	42112652		15511	0	1445	16956
S/G/Y/R/B/O	NT_005825	AC092043	42112652	3			AC069443	42112652		47291	0	8728	56019
S/G/Y/R/B/O	NT_005825	AC092042	42193759	3	chr3	NT_005825	AC104434	42354474	3	14189	0	0	14189
S/G/Y/R/B/O	NT_005825	AC092042	42193759	3			AC026352	41989923		73400	0	0	73400
S/G/Y/R/B/O	NT_005825	AC092042	42193759	3			AC069443	41989923		140823	0	993	141816
S/G/Y/R/B/O	NT_005825	AC104434	42354474	3	chr3	NT_005825	AC104184	42497821	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC104184	42497821	3	chr3	NT_005825	AC097638	42640855	3	58419	0	0	58419
S/G/Y/R/B/O	NT_005825	AC097638	42640855	3	chr3	NT_005825	AC135852	42752766	3	5870	0	0	5870
S/G/Y/R/B/O	NT_005825	AC097638	42640855	3			AC022985	42640855		39709	0	8919	48628
S/G/Y/R/B/O	NT_005825	AC097638	42640855	3			AC024378	42640855		64136	5127	5598	74861
S/G/Y/R/B/O	NT_005825	AC135852	42752766	3	chr3	NT_005825	AC105903	42762652	3	3031	0	0	3031
S/G/Y/R/B/O	NT_005825	AC135852	42752766	3			AC022627	42752766		18570	0	0	18570
S/G/Y/R/B/O	NT_005825	AC135852	42752766	3			AC022985	42752766		18497	0	0	18497
S/G/Y/R/B/O	NT_005825	AC135852	42752766	3			AC024378	42752766		10610	6311	348	17269
S/G/Y/R/B/O	NT_005825	AC105903	42762652	3	chr3	NT_005825	AC006055	42949603	3	28120	0	0	28120
S/G/Y/R/B/O	NT_005825	AC105903	42762652	3			AC022627	42949603		76397	4482	6982	87861
S/G/Y/R/B/O	NT_005825	AC105903	42762652	3			AC022985	42949603		42356	0	1231	43587
S/G/Y/R/B/O	NT_005825	AC105903	42762652	3			AC024378	42949603		47066	4414	2287	53767
S/G/Y/R/B/O	NT_005825	AC006055	42949603	3	chr3	NT_005825	AC104851	43013312	3	33426	0	0	33426
S/G/Y/R/B/O	NT_005825	AC104851	43013312	3	chr3	NT_005825	AC112210	43060721	3	79137	0	0	79137
S/G/Y/R/B/O	NT_005825	AC104851	43013312	3			AC073222	42949603		19516	1086	0	20602
S/G/Y/R/B/O	NT_005825	AC104851	43013312	3			AC073222	42949603		19516	1086	0	20602
S/G/Y/R/B/O	NT_005825	AC112210	43060721	3	chr3	NT_005825	AC006058	43207420	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC112210	43060721	3			AC073222	43060721		43944	2219	15536	61699
S/G/Y/R/B/O	NT_005825	AC006058	43207420	3	chr3	NT_005825	AC107625	43346243	3	0	0	56554	56554
S/G/Y/R/B/O	NT_005825	AC006058	43207420	3			AC073222	43013312		63564	6833	1369	71766
S/G/Y/R/B/O	NT_005825	AC107625	43346243	3	chr3	NT_005825	AC104187	43486572	3	0	0	103986	103986
S/G/Y/R/B/O	NT_005825	AC104187	43486572	3	chr3	NT_005825	AC134943	43568295	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC134943	43568295	3	chr3	NT_005825	AC099669	43664758	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC134943	43568295	3			AC134510	43346243		75224	0	0	75224
S/G/Y/R/B/O	NT_005825	AC134943	43568295	3			AC134510	43346243		75224	0	0	75224
S/G/Y/R/B/O	NT_005825	AC134943	43568295	3			AC134510	43346243		75224	0	0	75224
S/G/Y/R/B/O	NT_005825	AC134943	43568295	3			AC134510	43346243		75224	0	0	75224
S/G/Y/R/B/O	NT_005825	AC099669	43664758	3	chr3	NT_005825	AC124045	43881793	3	0	1760	0	1760
S/G/Y/R/B/O	NT_005825	AC099669	43664758	3			AC092046	43346243		109395	0	0	109395
S/G/Y/R/B/O	NT_005825	AC124045	43881793	3	chr3	NT_005825	AC098649	43943133	3	0	1866	0	1866
S/G/Y/R/B/O	NT_005825	AC124045	43881793	3			AC092046	43881793		61721	0	0	61721
S/G/Y/R/B/O	NT_005825	AC098649	43943133	3	chr3	NT_005825	AC104165	44147276	3	19659	0	0	19659
S/G/Y/R/B/O	NT_005825	AC104165	44147276	3	chr3	NT_005825	AC105902	44328573	3	95247	0	0	95247
S/G/Y/R/B/O	NT_005825	AC105902	44328573	3	chr3	NT_005825	AC010170	44396437	3	50065	0	0	50065
S/G/Y/R/B/O	NT_005825	AC010170	44396437	3	chr3	NT_005825	AC006515	44520349	3	100594	0	0	100594
S/G/Y/R/B/O	NT_005825	AC006515	44520349	3	chr3	NT_005825	AC092500	44643158	3	122698	0	0	122698
S/G/Y/R/B/O	NT_005825	AC092500	44643158	3	chr3	NT_005825	AC099539	44702939	3	0	0	25299	25299
S/G/Y/R/B/O	NT_005825	AC092500	44643158	3			AJ312684	44702939		12075	4365	12979	29419
S/G/Y/R/B/O	NT_005825	AC099539	44702939	3	chr3	NT_005825	AJ312686	44840021	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC099539	44702939	3			AC012659	44702939		81699	1639	0	83338
S/G/Y/R/B/O	NT_005825	AC099539	44702939	3			AJ132411	44643158		66348	0	4900	71248
S/G/Y/R/B/O	NT_005825	AC099539	44702939	3			AJ312684	44643158		32933	9098	15200	57231
S/G/Y/R/B/O	NT_005825	AJ312686	44840021	3	chr3	NT_005825	AC098476	44877017	3	6218	0	0	6218
S/G/Y/R/B/O	NT_005825	AJ312686	44840021	3			AC012659	44643158		46615	0	0	46615
S/G/Y/R/B/O	NT_005825	AJ312686	44840021	3			AJ132411	44877017		14022	0	33253	47275
S/G/Y/R/B/O	NT_005825	AC098476	44877017	3	chr3	NT_005825	AJ289880	44931332	3	114929	0	0	114929
S/G/Y/R/B/O	NT_005825	AC098476	44877017	3	chr3	NT_005825	AC099782	45073613	3	11993	0	0	11993
S/G/Y/R/B/O	NT_005825	AC098476	44877017	3			AC012659	44877017		22019	0	7591	29610
S/G/Y/R/B/O	NT_005825	AJ289880	44931332	3	chr3	NT_005825	AC099782	45073613	3	39148	0	0	39148
S/G/Y/R/B/O	NT_005825	AC099782	45073613	3	chr3	NT_005825	AC133140	45244211	3	3878	0	0	3878
S/G/Y/R/B/O	NT_005825	AC099782	45073613	3	chr3	NT_005825	AC098476	44877017	3	11993	0	0	11993
S/G/Y/R/B/O	NT_005825	AC099782	45073613	3			AC005669	45073613		92765	0	0	92765
S/G/Y/R/B/O	NT_005825	AC099782	45073613	3			AJ312687	44931332		81332	10888	27648	119868
S/G/Y/R/B/O	NT_005825	AC133140	45244211	3	chr3	NT_005825	AC104439	45295334	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC133140	45244211	3			AJ312687	45073613		19638	0	0	19638
S/G/Y/R/B/O	NT_005825	AC104439	45295334	3	chr3	NT_005825	AJ312688	45480882	2	40632	6276	972	47880
S/G/Y/R/B/O	NT_005825	AJ312688	45480882	2	chr3	NT_005825	U95626	45531785	3	2514	1794	1064	5372
S/G/Y/R/B/O	NT_005825	U95626	45531785	3	chr3	NT_005825	AC098613	45674853	3	110861	0	0	110861
S/G/Y/R/B/O	NT_005825	AC098613	45674853	3	chr3	NT_005825	AC104304	45687976	3	61158	0	0	61158
S/G/Y/R/B/O	NT_005825	AC098613	45674853	3			AJ310996	45687976		41793	4104	11384	57281
S/G/Y/R/B/O	NT_005825	AC104304	45687976	3	chr3	NT_005825	AC134504	45886906	1	9859	0	3925	13784
S/G/Y/R/B/O	NT_005825	AC104304	45687976	3			AJ310996	45886906		81216	11424	17366	110006
S/G/Y/R/B/O	NT_005825	AC134504	45886906	1	chr3	NT_005825	AC127430	45957021	1	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC127430	45957021	1	chr3	NT_005825	AC094020	45958181	3	53463	0	0	53463
S/G/Y/R/B/O	NT_005825	AC127430	45957021	1	chr3	NT_005825	AC104447	46404576	3	13645	0	0	13645
S/G/Y/R/B/O	NT_005825	AC127430	45957021	1			AC021052	46152910		15218	7405	17377	40000
S/G/Y/R/B/O	NT_005825	AC094020	45958181	3	chr3	NT_005825	AC109583	46152910	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC109583	46152910	3	chr3	NT_005825	AC104447	46404576	3	0	0	0	0
S/G/Y/R/B/O	NT_005825	AC104447	46404576	3
S/G/Y/R/B/O	NT_005825	AC104447	46404576	3	chr3	NT_005825	AC127430	45957021	1	13645	0	0	13645
S/G/Y/R/B/O	NT_005825	AC104447	46404576	3			AC005902	45886906		76271	0	0	76271
S/G/Y/R/B/O	NT_005825	AC104447	46404576	3			AC021052	45886906		11753	8983	10809	31545

NT_022567

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022567	AC099778	46617120	1	chr3	NT_022567	AC112512	46726240	1	20954	0	38216	59170
S/G/Y/R/B/O	NT_022567	AC099778	46617120	1			AC005902	45957021		12736	0	0	12736
S/G/Y/R/B/O	NT_022567	AC112512	46726240	1	chr3	NT_022567	AC026318	46747635	1	0	0	0	0
S/G/Y/R/B/O	NT_022567	AC112512	46726240	1	chr3	NT_022567	AC130472	46824681	3	71880	0	0	71880
S/G/Y/R/B/O	NT_022567	AC112512	46726240	1	chr3	NT_022567	AC130472	46824681	3	71880	0	0	71880
S/G/Y/R/B/O	NT_022567	AC026318	46747635	1	chr3	NT_022567	AC130472	46824681	3	8321	4331	12027	24679
S/G/Y/R/B/O	NT_022567	AC026318	46747635	1	chr3	NT_022567	AC016928	47180168	1	14106	0	0	14106
S/G/Y/R/B/O	NT_022567	AC130472	46824681	3	chr3	NT_022567	AC016928	47180168	1	0	0	0	0
S/G/Y/R/B/O	NT_022567	AC130472	46824681	3	chr3	NT_022567	AC112512	46726240	1	71880	0	0	71880
S/G/Y/R/B/O	NT_022567	AC130472	46824681	3	chr3	NT_022567	AC112512	46726240	1	71880	0	0	71880
S/G/Y/R/B/O	NT_022567	AC016928	47180168	1	chr3	NT_022567	AC124916	47288540	1	4014	0	27513	31527
S/G/Y/R/B/O	NT_022567	AC016928	47180168	1	chr3	NT_022567	AC026318	46747635	1	14106	0	0	14106
S/G/Y/R/B/O	NT_022567	AC016928	47180168	1			AC023910	46726240		30528	0	21136	51664
S/G/Y/R/B/O	NT_022567	AC124916	47288540	1	chr3	NT_022567	AC104190	47435019	3	0	0	53825	53825
S/G/Y/R/B/O	NT_022567	AC104190	47435019	3	chr3	NT_022567	AC105267	47606199	3	82302	0	0	82302
S/G/Y/R/B/O	NT_022567	AC105267	47606199	3	chr3	NT_022567	AC104448	47680676	3	16038	0	0	16038
S/G/Y/R/B/O	NT_022567	AC104448	47680676	3	chr3	NT_022567	AC134772	47820076	3	25822	0	0	25822
S/G/Y/R/B/O	NT_022567	AC134772	47820076	3	chr3	NT_022567	AC005903	47842273	3	0	0	8947	8947
S/G/Y/R/B/O	NT_022567	AC005903	47842273	3	chr3	NT_022567	AC005923	47902933	3	0	0	331	331
S/G/Y/R/B/O	NT_022567	AC005903	47842273	3	chr3	NT_022567	AC121252	47990928	1	22045	0	0	22045
S/G/Y/R/B/O	NT_022567	AC005923	47902933	3	chr3	NT_022567	AC121252	47990928	1	40211	0	0	40211
S/G/Y/R/B/O	NT_022567	AC121252	47990928	1
S/G/Y/R/B/O	NT_022567	AC121252	47990928	1	chr3	NT_022567	AC005903	47842273	3	22045	0	0	22045

NT_037566

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037566	AC134028	48097782	1

NT_034535

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034535	AC121247	48296791	1	chr3	NT_034535	AC135506	48311477	1	8016	0	0	8016
S/G/Y/R/B/O	NT_034535	AC121247	48296791	1			AC104311	47820076		15367	6826	16507	38700
S/G/Y/R/B/O	NT_034535	AC135506	48311477	1
S/G/Y/R/B/O	NT_034535	AC135506	48311477	1			AC104311	48311477		49929	3570	20413	73912

NT_022439

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022439	AC099668	48631222	3	chr3	NT_022439	AC104452	48800037	3	73406	0	0	73406
S/G/Y/R/B/O	NT_022439	AC099668	48631222	3			AC087503	48296791		32064	6068	34417	72549
S/G/Y/R/B/O	NT_022439	AC099668	48631222	3			AC087503	48296791		32064	6068	34417	72549
S/G/Y/R/B/O	NT_022439	AC099668	48631222	3			AC091567	48296791		91465	2540	68706	162711
S/G/Y/R/B/O	NT_022439	AC099668	48631222	3			AC091567	48296791		91465	2540	68706	162711
S/G/Y/R/B/O	NT_022439	AC104452	48800037	3
S/G/Y/R/B/O	NT_022439	AC104452	48800037	3			AC087503	48800037		66984	6022	107086	180092
S/G/Y/R/B/O	NT_022439	AC104452	48800037	3			AC091567	48800037		30926	2540	39428	72894

NT_006014

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_006014	AC131013	49186600	3	chr3	NT_006014	AC099047	49191327	3	0	0	0	0
S/G/Y/R/B/O	NT_006014	AC099047	49191327	3	chr3	NT_006014	AC126120	49375623	3	0	0	0	0
S/G/Y/R/B/O	NT_006014	AC126120	49375623	3	chr3	NT_006014	AC096920	49405873	3	0	0	1094	1094
S/G/Y/R/B/O	NT_006014	AC096920	49405873	3	chr3	NT_006014	AL450422	49598197	3	7834	0	0	7834
S/G/Y/R/B/O	NT_006014	AL450422	49598197	3	chr3	NT_006014	Z84494	49628252	3	0	0	100	100
S/G/Y/R/B/O	NT_006014	AL450422	49598197	3			Z84493	49405873		37888	0	366	38254
S/G/Y/R/B/O	NT_006014	Z84494	49628252	3	chr3	NT_006014	Z84495	49645102	3	0	0	104	104
S/G/Y/R/B/O	NT_006014	Z84495	49645102	3	chr3	NT_006014	Z75743	49673029	3	0	0	104	104
S/G/Y/R/B/O	NT_006014	Z75743	49673029	3	chr3	NT_006014	Z75742	49696980	3	0	0	104	104
S/G/Y/R/B/O	NT_006014	Z75742	49696980	3	chr3	NT_006014	Z84492	49732892	3	0	0	104	104
S/G/Y/R/B/O	NT_006014	Z84492	49732892	3	chr3	NT_006014	AC002481	49760632	3	0	0	104	104
S/G/Y/R/B/O	NT_006014	AC002481	49760632	3	chr3	NT_006014	AC002455	49788772	3	0	0	200	200
S/G/Y/R/B/O	NT_006014	AC002455	49788772	3	chr3	NT_006014	U73167	49817886	3	0	0	0	0
S/G/Y/R/B/O	NT_006014	U73167	49817886	3	chr3	NT_006014	U73166	49854220	3	0	0	200	200
S/G/Y/R/B/O	NT_006014	U73167	49817886	3			U90094	49854220		36506	0	0	36506
S/G/Y/R/B/O	NT_006014	U73166	49854220	3	chr3	NT_006014	U73169	49862849	3	0	0	200	200
S/G/Y/R/B/O	NT_006014	U73169	49862849	3	chr3	NT_006014	AC002077	49889465	3	0	0	200	200
S/G/Y/R/B/O	NT_006014	AC002077	49889465	3	chr3	NT_006014	AC000063	49927947	3	0	0	200	200
S/G/Y/R/B/O	NT_006014	AC000063	49927947	3	chr3	NT_006014	AC104450	49962225	3	18916	0	0	18916
S/G/Y/R/B/O	NT_006014	AC104450	49962225	3	chr3	NT_006014	AC105935	50160622	3	0	0	0	0
S/G/Y/R/B/O	NT_006014	AC104450	49962225	3	chr3	NT_006014	AC099330	50252168	1	12254	0	0	12254
S/G/Y/R/B/O	NT_006014	AC104450	49962225	3			AC004814	49927947		82527	0	0	82527
S/G/Y/R/B/O	NT_006014	AC105935	50160622	3	chr3	NT_006014	AC099330	50252168	1	12048	0	46469	58517
S/G/Y/R/B/O	NT_006014	AC099330	50252168	1
S/G/Y/R/B/O	NT_006014	AC099330	50252168	1	chr3	NT_006014	AC104450	49962225	3	12254	0	0	12254

NT_033032

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_033032	AC107313	50285940	3

NT_037567

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037567	AC096886	50488449	3
S/G/Y/R/B/O	NT_037567	AC096886	50488449	3			AC067763	50160622		49043	13554	9121	71718

NT_005986

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005986	AC092037	50661563	1	chr3	NT_005986	AC113933	50755884	3	37036	0	0	37036
S/G/Y/R/B/O	NT_005986	AC092037	50661563	1			AC067763	50661563		18686	2331	5495	26512
S/G/Y/R/B/O	NT_005986	AC113933	50755884	3	chr3	NT_005986	AC099050	50929653	3	18369	0	0	18369
S/G/Y/R/B/O	NT_005986	AC099050	50929653	3	chr3	NT_005986	AC097636	51085320	3	0	0	0	0
S/G/Y/R/B/O	NT_005986	AC097636	51085320	3	chr3	NT_005986	AC115284	51285451	1	0	0	29617	29617
S/G/Y/R/B/O	NT_005986	AC115284	51285451	1	chr3	NT_005986	AC097637	51310791	3	32048	0	45124	77172
S/G/Y/R/B/O	NT_005986	AC115284	51285451	1			AC006255	51285451		26378	0	0	26378
S/G/Y/R/B/O	NT_005986	AC097637	51310791	3	chr3	NT_005986	AC006252	51520043	3	64295	0	0	64295
S/G/Y/R/B/O	NT_005986	AC097637	51310791	3			AC044892	51520043		41593	2239	0	43832
S/G/Y/R/B/O	NT_005986	AC097637	51310791	3			AC094021	51520043		12439	0	0	12439
S/G/Y/R/B/O	NT_005986	AC006252	51520043	3	chr3	NT_005986	AC092045	51537767	3	9670	0	0	9670
S/G/Y/R/B/O	NT_005986	AC006252	51520043	3			AC044892	51285451		72516	5754	0	78270
S/G/Y/R/B/O	NT_005986	AC006252	51520043	3			AC094021	51537767		30145	0	0	30145
S/G/Y/R/B/O	NT_005986	AC092045	51537767	3	chr3	NT_005986	AC006208	51699434	3	21281	0	0	21281
S/G/Y/R/B/O	NT_005986	AC092045	51537767	3			AC044892	51520043		28561	13616	7574	49751
S/G/Y/R/B/O	NT_005986	AC092045	51537767	3			AC094021	51520043		156490	0	0	156490
S/G/Y/R/B/O	NT_005986	AC006208	51699434	3	chr3	NT_005986	AC112215	51802084	3	65329	0	0	65329
S/G/Y/R/B/O	NT_005986	AC006208	51699434	3			AC094021	51537767		58421	0	0	58421
S/G/Y/R/B/O	NT_005986	AC006208	51699434	3			AC105934	51537767		56982	0	0	56982
S/G/Y/R/B/O	NT_005986	AC112215	51802084	3	chr3	NT_005986	AC104446	51832663	3	102129	0	0	102129
S/G/Y/R/B/O	NT_005986	AC112215	51802084	3			AC012522	51699434		41359	9221	12070	62650
S/G/Y/R/B/O	NT_005986	AC112215	51802084	3			AC105934	51832663		189722	0	0	189722
S/G/Y/R/B/O	NT_005986	AC104446	51832663	3	chr3	NT_005986	AC006254	52019397	3	36683	0	0	36683
S/G/Y/R/B/O	NT_005986	AC104446	51832663	3			AC012522	52019397		80705	10859	25637	117201
S/G/Y/R/B/O	NT_005986	AC006254	52019397	3	chr3	NT_005986	AC099667	52116183	3	64742	0	0	64742
S/G/Y/R/B/O	NT_005986	AC006254	52019397	3			AC012522	51802084		13592	2349	1420	17361
S/G/Y/R/B/O	NT_005986	AC006254	52019397	3			AC109582	51832663		17753	0	0	17753
S/G/Y/R/B/O	NT_005986	AC099667	52116183	3	chr3	NT_005986	AC103589	52255195	3	0	0	1721	1721
S/G/Y/R/B/O	NT_005986	AC099667	52116183	3			AC109582	52255195		156825	0	0	156825
S/G/Y/R/B/O	NT_005986	AC103589	52255195	3	chr3	NT_005986	AC096887	52265182	3	0	0	0	0
S/G/Y/R/B/O	NT_005986	AC096887	52265182	3	chr3	NT_005986	AC097015	52426402	3	10069	0	0	10069
S/G/Y/R/B/O	NT_005986	AC097015	52426402	3	chr3	NT_005986	AC112218	52556013	3	48960	0	0	48960
S/G/Y/R/B/O	NT_005986	AC112218	52556013	3	chr3	NT_005986	AC092035	52700332	3	85835	0	0	85835
S/G/Y/R/B/O	NT_005986	AC112218	52556013	3			AC023231	52556013		25817	11950	14862	52629
S/G/Y/R/B/O	NT_005986	AC092035	52700332	3	chr3	NT_005986	AC005905	52777452	3	13486	0	0	13486
S/G/Y/R/B/O	NT_005986	AC092035	52700332	3			AC023231	52777452		40252	13053	31083	84388
S/G/Y/R/B/O	NT_005986	AC005905	52777452	3	chr3	NT_005986	AC024149	52868242	1	6049	0	13912	19961
S/G/Y/R/B/O	NT_005986	AC005905	52777452	3			AC023231	52556013		22186	0	10691	32877
S/G/Y/R/B/O	NT_005986	AC024149	52868242	1	chr3	NT_005986	AC132810	52915399	3	79169	0	6302	85471
S/G/Y/R/B/O	NT_005986	AC024149	52868242	1			AC021470	52777452		115206	0	5695	120901
S/G/Y/R/B/O	NT_005986	AC024149	52868242	1			AC068426	52777452		51628	15218	7247	74093
S/G/Y/R/B/O	NT_005986	AC132810	52915399	3	chr3	NT_005986	AC012467	53024440	3	17640	0	0	17640
S/G/Y/R/B/O	NT_005986	AC132810	52915399	3			AC021470	53024440		132336	0	1884	134220
S/G/Y/R/B/O	NT_005986	AC132810	52915399	3			AC068426	52868242		81923	17266	2288	101477
S/G/Y/R/B/O	NT_005986	AC012467	53024440	3	chr3	NT_005986	AC113172	53201512	3	0	0	0	0
S/G/Y/R/B/O	NT_005986	AC012467	53024440	3			AC021470	52868242		15250	0	0	15250
S/G/Y/R/B/O	NT_005986	AC012467	53024440	3			AC068426	52868242		66760	8305	9096	84161
S/G/Y/R/B/O	NT_005986	AC113172	53201512	3

NT_033038

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_033038	AC115282	53290927	3	chr3	NT_033038	AC109581	53471988	3	65511	0	0	65511
S/G/Y/R/B/O	NT_033038	AC109581	53471988	3	chr3	NT_033038	AC133010	53561809	3	36870	0	0	36870
S/G/Y/R/B/O	NT_033038	AC133010	53561809	3
S/G/Y/R/B/O	NT_033038	AC133010	53561809	3			AC018353	53561809		31539	0	0	31539
S/G/Y/R/B/O	NT_033038	AC133010	53561809	3			AC018353	53561809		31539	0	0	31539

NT_034652

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034652	AC068753	53699840	1	chr3	NT_034652	AC092057	53761271	3	111435	4938	2126	118499
S/G/Y/R/B/O	NT_034652	AC092057	53761271	3	chr3	NT_034652	AC109584	53921685	3	24148	0	0	24148
S/G/Y/R/B/O	NT_034652	AC109584	53921685	3	chr3	NT_034652	AC092797	54082694	3	131076	0	0	131076
S/G/Y/R/B/O	NT_034652	AC109584	53921685	3			AC079032	53921685		45168	2738	42947	90853
S/G/Y/R/B/O	NT_034652	AC092797	54082694	3	chr3	NT_034652	AC104298	54151893	3	65734	0	0	65734
S/G/Y/R/B/O	NT_034652	AC092797	54082694	3			AC079032	54082694		36977	2738	40668	80383
S/G/Y/R/B/O	NT_034652	AC092797	54082694	3			AC093417	54082694		25631	0	0	25631
S/G/Y/R/B/O	NT_034652	AC104298	54151893	3	chr3	NT_034652	AC092059	54261475	3	0	0	0	0
S/G/Y/R/B/O	NT_034652	AC104298	54151893	3			AC018594	53921685		34833	4262	0	39095
S/G/Y/R/B/O	NT_034652	AC104298	54151893	3			AC021252	53921685		46818	2430	0	49248
S/G/Y/R/B/O	NT_034652	AC104298	54151893	3			AC093417	54082694		63495	1899	1471	66865
S/G/Y/R/B/O	NT_034652	AC092059	54261475	3	chr3	NT_034652	AC121248	54389614	3	84377	0	0	84377
S/G/Y/R/B/O	NT_034652	AC092059	54261475	3			AC018594	54082694		97922	2679	0	100601
S/G/Y/R/B/O	NT_034652	AC092059	54261475	3			AC021252	54082694		53496	2597	0	56093
S/G/Y/R/B/O	NT_034652	AC121248	54389614	3	chr3	NT_034652	AC121764	54485168	3	5909	0	0	5909
S/G/Y/R/B/O	NT_034652	AC121248	54389614	3			AC016306	54389614		79050	3480	0	82530
S/G/Y/R/B/O	NT_034652	AC121248	54389614	3			AC016323	54389614		62619	3674	1476	67769
S/G/Y/R/B/O	NT_034652	AC121248	54389614	3			AC018594	54389614		39885	0	0	39885
S/G/Y/R/B/O	NT_034652	AC121248	54389614	3			AC021252	54389614		15156	2597	0	17753
S/G/Y/R/B/O	NT_034652	AC121764	54485168	3	chr3	NT_034652	AC130276	54686547	3	2383	0	0	2383
S/G/Y/R/B/O	NT_034652	AC121764	54485168	3			AC016306	54485168		40355	0	6240	46595
S/G/Y/R/B/O	NT_034652	AC121764	54485168	3			AC016323	54485168		78550	3447	2675	84672
S/G/Y/R/B/O	NT_034652	AC121764	54485168	3			AC078978	54485168		16098	1593	5506	23197
S/G/Y/R/B/O	NT_034652	AC121764	54485168	3			AC107298	54485168		85685	1228	33035	119948
S/G/Y/R/B/O	NT_034652	AC130276	54686547	3	chr3	NT_034652	AC025572	54758759	3	3965	0	0	3965
S/G/Y/R/B/O	NT_034652	AC130276	54686547	3			AC078978	54758759		52513	0	20478	72991
S/G/Y/R/B/O	NT_034652	AC025572	54758759	3
S/G/Y/R/B/O	NT_034652	AC025572	54758759	3	chr3	NT_037568	AC097014	54956304	3	143404	0	0	143404
S/G/Y/R/B/O	NT_034652	AC025572	54758759	3	chr3	NT_037568	AC116991	55099975	3	58465	0	0	58465
S/G/Y/R/B/O	NT_034652	AC025572	54758759	3			AC078978	54485168		64637	0	32330	96967

NT_037568

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037568	AC097014	54956304	3	chr3	NT_037568	AC116991	55099975	3	13138	0	0	13138
S/G/Y/R/B/O	NT_037568	AC097014	54956304	3	chr3	NT_034652	AC025572	54758759	3	143404	0	0	143404
S/G/Y/R/B/O	NT_037568	AC097014	54956304	3			AC078978	54758759		67876	0	26832	94708
S/G/Y/R/B/O	NT_037568	AC116991	55099975	3	chr3	NT_037568	AC104302	55239631	3	61069	0	0	61069
S/G/Y/R/B/O	NT_037568	AC116991	55099975	3	chr3	NT_034652	AC025572	54758759	3	58465	0	0	58465
S/G/Y/R/B/O	NT_037568	AC104302	55239631	3	chr3	NT_037568	AC105748	55385426	3	30866	0	0	30866
S/G/Y/R/B/O	NT_037568	AC105748	55385426	3	chr3	NT_037568	AC121255	55516816	3	2312	0	0	2312
S/G/Y/R/B/O	NT_037568	AC121255	55516816	3	chr3	NT_037568	AC099775	55525402	3	0	0	0	0
S/G/Y/R/B/O	NT_037568	AC099775	55525402	3	chr3	NT_037568	AC105753	55706845	3	142354	0	0	142354
S/G/Y/R/B/O	NT_037568	AC105753	55706845	3	chr3	NT_037568	AC126119	55711244	3	2922	0	0	2922
S/G/Y/R/B/O	NT_037568	AC126119	55711244	3	chr3	NT_037568	AC098478	55759000	3	3488	0	0	3488
S/G/Y/R/B/O	NT_037568	AC098478	55759000	3

NT_005787

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005787	AC099781	55986346	3	chr3	NT_005787	AC099559	56187050	3	5410	0	0	5410
S/G/Y/R/B/O	NT_005787	AC099559	56187050	3	chr3	NT_005787	AC099327	56344364	1	0	0	79086	79086
S/G/Y/R/B/O	NT_005787	AC099327	56344364	1	chr3	NT_005787	AC092050	56379248	3	62420	0	0	62420
S/G/Y/R/B/O	NT_005787	AC099327	56344364	1	chr3	NT_005787	AC097358	56551182	3	14260	0	0	14260
S/G/Y/R/B/O	NT_005787	AC092050	56379248	3	chr3	NT_005787	AC097358	56551182	3	123550	0	0	123550
S/G/Y/R/B/O	NT_005787	AC097358	56551182	3	chr3	NT_005787	AC093928	56581962	3	23440	0	0	23440
S/G/Y/R/B/O	NT_005787	AC097358	56551182	3	chr3	NT_005787	AC099327	56344364	1	14260	0	0	14260
S/G/Y/R/B/O	NT_005787	AC093928	56581962	3	chr3	NT_005787	AC121250	56723664	3	4230	0	0	4230
S/G/Y/R/B/O	NT_005787	AC121250	56723664	3	chr3	NT_005787	AC092418	56754156	3	4576	0	0	4576
S/G/Y/R/B/O	NT_005787	AC092418	56754156	3	chr3	NT_005787	AC114480	56914079	1	10955	783	0	11738
S/G/Y/R/B/O	NT_005787	AC114480	56914079	1	chr3	NT_005787	AC099558	56981589	3	7823	3798	91814	103435
S/G/Y/R/B/O	NT_005787	AC114480	56914079	1			AC108040	57099244		34597	0	6997	41594
S/G/Y/R/B/O	NT_005787	AC099558	56981589	3	chr3	NT_005787	AC099777	57099244	3	62346	0	0	62346
S/G/Y/R/B/O	NT_005787	AC099777	57099244	3	chr3	NT_005787	AC114399	57305781	3	48891	0	0	48891
S/G/Y/R/B/O	NT_005787	AC099777	57099244	3			AC069254	56914079		38575	0	25596	64171
S/G/Y/R/B/O	NT_005787	AC114399	57305781	3	chr3	NT_005787	AC079624	57437791	1	25848	2703	0	28551
S/G/Y/R/B/O	NT_005787	AC114399	57305781	3			AC069254	56914079		37308	4807	25001	67116
S/G/Y/R/B/O	NT_005787	AC079624	57437791	1	chr3	NT_005787	AC135507	57536454	1	0	0	0	0
S/G/Y/R/B/O	NT_005787	AC079624	57437791	1	chr3	NT_005787	AC098479	57542847	3	36270	0	9979	46249
S/G/Y/R/B/O	NT_005787	AC079624	57437791	1			AC110008	57542847		27724	0	9980	37704
S/G/Y/R/B/O	NT_005787	AC135507	57536454	1	chr3	NT_005787	AC098479	57542847	3	38752	2761	21585	63098
S/G/Y/R/B/O	NT_005787	AC135507	57536454	1	chr3	NT_005787	AC116036	57741514	3	76685	0	0	76685
S/G/Y/R/B/O	NT_005787	AC135507	57536454	1			AC110008	179687216		48224	2759	11095	62078
S/G/Y/R/B/O	NT_005787	AC098479	57542847	3	chr3	NT_005787	AC116036	57741514	3	0	0	0	0
S/G/Y/R/B/O	NT_005787	AC098479	57542847	3	chr3	NT_005787	AC079624	57437791	1	36270	0	9979	46249
S/G/Y/R/B/O	NT_005787	AC098479	57542847	3			AC110008	179687216		157255	0	7327	164582
S/G/Y/R/B/O	NT_005787	AC116036	57741514	3	chr3	NT_005787	AC119424	57919620	3	0	0	0	0
S/G/Y/R/B/O	NT_005787	AC116036	57741514	3	chr3	NT_005787	AC135507	57536454	1	76685	0	0	76685
S/G/Y/R/B/O	NT_005787	AC116036	57741514	3			AC112216	57536454		94887	0	0	94887
S/G/Y/R/B/O	NT_005787	AC119424	57919620	3	chr3	NT_005787	AC104303	58088442	3	20392	0	0	20392
S/G/Y/R/B/O	NT_005787	AC119424	57919620	3			AC105751	58088442		168834	0	0	168834
S/G/Y/R/B/O	NT_005787	AC104303	58088442	3	chr3	NT_005787	AC104300	58267092	3	8035	0	0	8035
S/G/Y/R/B/O	NT_005787	AC104303	58088442	3			AC076969	58088442		48843	4067	13535	66445
S/G/Y/R/B/O	NT_005787	AC104300	58267092	3	chr3	NT_005787	AC114400	58415081	3	0	0	0	0
S/G/Y/R/B/O	NT_005787	AC104300	58267092	3			AC016929	57919620		30057	0	27380	57437
S/G/Y/R/B/O	NT_005787	AC104300	58267092	3			AC022226	57919620		21369	5122	32511	59002
S/G/Y/R/B/O	NT_005787	AC104300	58267092	3			AC121249	58088442		22115	0	0	22115
S/G/Y/R/B/O	NT_005787	AC114400	58415081	3	chr3	NT_005787	AC104437	58498971	3	0	0	0	0
S/G/Y/R/B/O	NT_005787	AC114400	58415081	3			AC016929	58088442		33941	0	2630	36571
S/G/Y/R/B/O	NT_005787	AC104437	58498971	3

NT_005607

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005607	AC135054	58604500	3	chr3	NT_005607	AC126121	58760618	3	44452	0	0	44452
S/G/Y/R/B/O	NT_005607	AC135054	58604500	3			AC016054	58088442		121799	1715	1175	124689
S/G/Y/R/B/O	NT_005607	AC135054	58604500	3			AC016054	58088442		121799	1715	1175	124689
S/G/Y/R/B/O	NT_005607	AC126121	58760618	3	chr3	NT_005607	AC132808	58931320	1	35863	0	0	35863
S/G/Y/R/B/O	NT_005607	AC126121	58760618	3			AC016054	58760618		32332	826	0	33158
S/G/Y/R/B/O	NT_005607	AC126121	58760618	3			AC016054	58760618		32332	826	0	33158
S/G/Y/R/B/O	NT_005607	AC126121	58760618	3			AC027289	58760618		96055	2260	17745	116060
S/G/Y/R/B/O	NT_005607	AC126121	58760618	3			AC027289	58760618		96055	2260	17745	116060
S/G/Y/R/B/O	NT_005607	AC126121	58760618	3			AC135949	58604500		32921	7598	13261	53780
S/G/Y/R/B/O	NT_005607	AC126121	58760618	3			AC135949	58604500		32921	7598	13261	53780
S/G/Y/R/B/O	NT_005607	AC132808	58931320	1	chr3	NT_005607	AC093418	59014624	3	75731	0	0	75731
S/G/Y/R/B/O	NT_005607	AC132808	58931320	1			AC016944	58604500		74597	0	55705	130302
S/G/Y/R/B/O	NT_005607	AC132808	58931320	1			AC020643	58604500		43743	0	32800	76543
S/G/Y/R/B/O	NT_005607	AC132808	58931320	1			AC027289	58604500		44077	1798	20297	66172
S/G/Y/R/B/O	NT_005607	AC132808	58931320	1			AC093413	58604500		22948	0	0	22948
S/G/Y/R/B/O	NT_005607	AC132808	58931320	1			AC135949	58760618		33636	2916	5940	42492
S/G/Y/R/B/O	NT_005607	AC093418	59014624	3	chr3	NT_005607	AC099780	59220944	3	2391	0	0	2391
S/G/Y/R/B/O	NT_005607	AC093418	59014624	3			AC016944	58760618		91049	0	8770	99819
S/G/Y/R/B/O	NT_005607	AC093418	59014624	3			AC069441	58760618		49813	0	0	49813
S/G/Y/R/B/O	NT_005607	AC093418	59014624	3			AC093413	58760618		152843	0	0	152843
S/G/Y/R/B/O	NT_005607	AC099780	59220944	3	chr3	NT_005607	AF152364	59412346	3	109301	0	0	109301
S/G/Y/R/B/O	NT_005607	AC099780	59220944	3			AC069441	58931320		76693	0	52333	129026
S/G/Y/R/B/O	NT_005607	AC099780	59220944	3			AC093413	58931320		23788	0	0	23788
S/G/Y/R/B/O	NT_005607	AF152364	59412346	3	chr3	NT_005607	AF152365	59472486	3	5841	0	0	5841
S/G/Y/R/B/O	NT_005607	AF152364	59412346	3			AC069441	59412346		40763	0	5541	46304
S/G/Y/R/B/O	NT_005607	AF152364	59412346	3			AC108487	59220944		32010	0	0	32010
S/G/Y/R/B/O	NT_005607	AF152365	59472486	3	chr3	NT_005607	AC099536	59713191	3	15469	0	0	15469
S/G/Y/R/B/O	NT_005607	AF152365	59472486	3			AC025812	59472486		148729	0	0	148729
S/G/Y/R/B/O	NT_005607	AF152365	59472486	3			AC055708	59472486		36175	0	0	36175
S/G/Y/R/B/O	NT_005607	AF152365	59472486	3			AC104168	59713191		54115	0	14459	68574
S/G/Y/R/B/O	NT_005607	AF152365	59472486	3			AC108487	59713191		154240	0	0	154240
S/G/Y/R/B/O	NT_005607	AC099536	59713191	3	chr3	NT_005607	AC093556	59868260	3	121093	0	0	121093
S/G/Y/R/B/O	NT_005607	AC099536	59713191	3			AC021406	59412346		119969	0	11579	131548
S/G/Y/R/B/O	NT_005607	AC099536	59713191	3			AC055708	59412346		93804	0	0	93804
S/G/Y/R/B/O	NT_005607	AC099536	59713191	3			AC104168	59868260		33504	0	0	33504
S/G/Y/R/B/O	NT_005607	AC093556	59868260	3	chr3	NT_005607	AC104164	59874017	3	25755	0	0	25755
S/G/Y/R/B/O	NT_005607	AC093556	59868260	3			AC021406	59472486		115134	0	11630	126764
S/G/Y/R/B/O	NT_005607	AC093556	59868260	3			AC055708	59472486		44368	0	0	44368
S/G/Y/R/B/O	NT_005607	AC104164	59874017	3

NT_037569

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037569	AF152363	60081500	3	chr3	NT_037569	AC096917	60218384	3	0	0	0	0
S/G/Y/R/B/O	NT_037569	AC096917	60218384	3

NT_005999

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005999	AC021400	60398572	1	chr3	NT_005999	AC098480	60399848	3	99834	5780	26578	132192
S/G/Y/R/B/O	NT_005999	AC021400	60398572	1	chr3	NT_005999	AC097357	60588529	3	32992	0	0	32992
S/G/Y/R/B/O	NT_005999	AC021400	60398572	1			AC013250	59868260		111365	5209	21568	138142
S/G/Y/R/B/O	NT_005999	AC021400	60398572	1			AC073064	59868260		21827	1502	8074	31403
S/G/Y/R/B/O	NT_005999	AC098480	60399848	3	chr3	NT_005999	AC097357	60588529	3	70349	0	0	70349
S/G/Y/R/B/O	NT_005999	AC098480	60399848	3			AC013250	60399848		62864	0	26781	89645
S/G/Y/R/B/O	NT_005999	AC098480	60399848	3			AC073064	60398572		51295	0	7980	59275
S/G/Y/R/B/O	NT_005999	AC097357	60588529	3	chr3	NT_005999	AC114398	60680456	3	27696	0	0	27696
S/G/Y/R/B/O	NT_005999	AC097357	60588529	3	chr3	NT_005999	AC021400	60398572	1	32992	0	0	32992
S/G/Y/R/B/O	NT_005999	AC097357	60588529	3			AC073064	60398572		79902	0	8012	87914
S/G/Y/R/B/O	NT_005999	AC114398	60680456	3	chr3	NT_005999	AC103587	60842325	3	0	0	0	0
S/G/Y/R/B/O	NT_005999	AC114398	60680456	3			AC073064	60680456		12464	0	0	12464
S/G/Y/R/B/O	NT_005999	AC103587	60842325	3	chr3	NT_005999	AC103921	60976246	3	0	0	89731	89731
S/G/Y/R/B/O	NT_005999	AC103921	60976246	3	chr3	NT_005999	AC096919	61042115	3	40969	0	0	40969
S/G/Y/R/B/O	NT_005999	AC096919	61042115	3	chr3	NT_005999	AC098482	61167122	3	7720	0	0	7720
S/G/Y/R/B/O	NT_005999	AC096919	61042115	3			AC068168	60842325		65770	2982	0	68752
S/G/Y/R/B/O	NT_005999	AC096919	61042115	3			AC069295	60842325		39356	0	11380	50736
S/G/Y/R/B/O	NT_005999	AC098482	61167122	3	chr3	NT_005999	AC004695	61336800	3	41830	0	0	41830
S/G/Y/R/B/O	NT_005999	AC098482	61167122	3			AC022331	61336800		63776	2486	0	66262
S/G/Y/R/B/O	NT_005999	AC098482	61167122	3			AC068168	61336800		95827	2451	1102	99380
S/G/Y/R/B/O	NT_005999	AC098482	61167122	3			AC069295	61336800		43293	2270	46738	92301
S/G/Y/R/B/O	NT_005999	AC004695	61336800	3	chr3	NT_005999	AC104849	61486372	3	41876	0	0	41876
S/G/Y/R/B/O	NT_005999	AC004695	61336800	3			AC022331	61042115		52398	0	0	52398
S/G/Y/R/B/O	NT_005999	AC104849	61486372	3	chr3	NT_005999	AC105939	61610196	3	78018	0	0	78018
S/G/Y/R/B/O	NT_005999	AC105939	61610196	3	chr3	NT_005999	AC092502	61629499	3	11287	0	0	11287
S/G/Y/R/B/O	NT_005999	AC092502	61629499	3	chr3	NT_005999	AC104161	61770270	3	4525	0	0	4525
S/G/Y/R/B/O	NT_005999	AC092502	61629499	3			AC074017	61486372		54063	2831	19656	76550
S/G/Y/R/B/O	NT_005999	AC104161	61770270	3	chr3	NT_005999	AC092039	61936929	3	36053	0	0	36053
S/G/Y/R/B/O	NT_005999	AC104161	61770270	3			AC018899	61610196		83264	2926	0	86190
S/G/Y/R/B/O	NT_005999	AC104161	61770270	3			AC074017	61610196		33339	0	14589	47928
S/G/Y/R/B/O	NT_005999	AC092039	61936929	3	chr3	NT_005999	AC124860	62067416	3	0	1454	0	1454
S/G/Y/R/B/O	NT_005999	AC092039	61936929	3			AC018899	61629499		111293	3281	15028	129602
S/G/Y/R/B/O	NT_005999	AC124860	62067416	3	chr3	NT_005999	AC012519	62105312	3	3296	0	0	3296
S/G/Y/R/B/O	NT_005999	AC012519	62105312	3	chr3	NT_005999	AC096915	62286448	3	44066	0	0	44066
S/G/Y/R/B/O	NT_005999	AC012519	62105312	3			AC093115	61936929		173128	0	0	173128
S/G/Y/R/B/O	NT_005999	AC096915	62286448	3	chr3	NT_005999	AC104299	62412512	3	8192	0	0	8192
S/G/Y/R/B/O	NT_005999	AC096915	62286448	3			AC093115	62105312		33147	0	0	33147
S/G/Y/R/B/O	NT_005999	AC104299	62412512	3	chr3	NT_005999	AC099545	62577266	3	8487	0	0	8487
S/G/Y/R/B/O	NT_005999	AC104299	62412512	3			AC068372	62412512		34741	0	9185	43926
S/G/Y/R/B/O	NT_005999	AC099545	62577266	3	chr3	NT_005999	AC099056	62707071	3	0	0	0	0
S/G/Y/R/B/O	NT_005999	AC099545	62577266	3			AC068171	62577266		51755	6012	956	58723
S/G/Y/R/B/O	NT_005999	AC099545	62577266	3			AC068372	62577266		45340	6084	0	51424
S/G/Y/R/B/O	NT_005999	AC099545	62577266	3			AC072020	62577266		16014	2342	10085	28441
S/G/Y/R/B/O	NT_005999	AC099056	62707071	3	chr3	NT_005999	AC104436	62889476	3	15588	0	0	15588
S/G/Y/R/B/O	NT_005999	AC099056	62707071	3			AC068171	62412512		73123	19084	4365	96572
S/G/Y/R/B/O	NT_005999	AC099056	62707071	3			AC072020	62412512		67295	4172	12823	84290
S/G/Y/R/B/O	NT_005999	AC104436	62889476	3	chr3	NT_005999	AC136289	63020652	1	59827	0	9643	69470
S/G/Y/R/B/O	NT_005999	AC136289	63020652	1	chr3	NT_005999	AC104162	63111460	3	3683	0	41124	44807
S/G/Y/R/B/O	NT_005999	AC136289	63020652	1			AC112199	62889476		92339	0	3296	95635
S/G/Y/R/B/O	NT_005999	AC104162	63111460	3	chr3	NT_005999	AC012557	63231141	3	58616	0	0	58616
S/G/Y/R/B/O	NT_005999	AC104162	63111460	3			AC063925	63231141		12580	2117	7628	22325
S/G/Y/R/B/O	NT_005999	AC104162	63111460	3			AC092049	63231141		37622	0	0	37622
S/G/Y/R/B/O	NT_005999	AC104162	63111460	3			AC098569	63231141		96411	3925	0	100336
S/G/Y/R/B/O	NT_005999	AC104162	63111460	3			AC112199	63231141		41072	0	82875	123947
S/G/Y/R/B/O	NT_005999	AC012557	63231141	3	chr3	NT_005999	AC134771	63420361	3	3211	0	0	3211
S/G/Y/R/B/O	NT_005999	AC012557	63231141	3			AC063925	63020652		103764	2197	30215	136176
S/G/Y/R/B/O	NT_005999	AC012557	63231141	3			AC092049	63020652		39646	0	149628	189274
S/G/Y/R/B/O	NT_005999	AC012557	63231141	3			AC098569	63020652		107499	0	0	107499
S/G/Y/R/B/O	NT_005999	AC134771	63420361	3	chr3	NT_005999	AC092040	63440808	3	0	1932	0	1932
S/G/Y/R/B/O	NT_005999	AC092040	63440808	3	chr3	NT_005999	AC092419	63611985	1	130874	0	0	130874
S/G/Y/R/B/O	NT_005999	AC092040	63440808	3			AC007944	63440808		130272	0	535	130807
S/G/Y/R/B/O	NT_005999	AC092040	63440808	3			AC018656	63440808		90914	3775	3061	97750
S/G/Y/R/B/O	NT_005999	AC092040	63440808	3			AC021875	63440808		20678	0	0	20678
S/G/Y/R/B/O	NT_005999	AC092040	63440808	3			AC079314	63440808		26359	9767	6801	42927
S/G/Y/R/B/O	NT_005999	AC092040	63440808	3			AC118548	63611985		79949	0	763	80712
S/G/Y/R/B/O	NT_005999	AC092419	63611985	1	chr3	NT_005999	AC103557	63626317	3	14041	0	0	14041
S/G/Y/R/B/O	NT_005999	AC092419	63611985	1			AC007944	63420361		134651	0	14677	149328
S/G/Y/R/B/O	NT_005999	AC092419	63611985	1			AC018656	63420361		62084	3775	3061	68920
S/G/Y/R/B/O	NT_005999	AC092419	63611985	1			AC021875	63420361		44820	0	0	44820
S/G/Y/R/B/O	NT_005999	AC092419	63611985	1			AC079314	63420361		23193	5275	9540	38008
S/G/Y/R/B/O	NT_005999	AC092419	63611985	1			AC118548	63626317		108153	0	763	108916
S/G/Y/R/B/O	NT_005999	AC092419	63611985	1			AC136275	63626317		18343	0	0	18343
S/G/Y/R/B/O	NT_005999	AC103557	63626317	3	chr3	NT_005999	AC096888	63785383	3	5326	0	0	5326
S/G/Y/R/B/O	NT_005999	AC103557	63626317	3			AC007944	63626317		13911	0	0	13911
S/G/Y/R/B/O	NT_005999	AC103557	63626317	3			AC021875	63626317		82594	3180	9576	95350
S/G/Y/R/B/O	NT_005999	AC103557	63626317	3			AC118548	63785383		31862	1487	0	33349
S/G/Y/R/B/O	NT_005999	AC096888	63785383	3	chr3	NT_005999	AC122178	63945346	3	11118	0	0	11118
S/G/Y/R/B/O	NT_005999	AC122178	63945346	3	chr3	NT_005999	AC008583	64111297	3	35925	0	0	35925
S/G/Y/R/B/O	NT_005999	AC008583	64111297	3	chr3	NT_005999	AC121766	64233894	1	24700	0	5360	30060
S/G/Y/R/B/O	NT_005999	AC008583	64111297	3			AC015475	63785383		11683	0	0	11683
S/G/Y/R/B/O	NT_005999	AC008583	64111297	3			AC015521	63785383		77692	0	0	77692
S/G/Y/R/B/O	NT_005999	AC121766	64233894	1	chr3	NT_005999	AC068089	64234214	1	98097	8864	6214	113175
S/G/Y/R/B/O	NT_005999	AC121766	64233894	1			AC015475	64111297		124515	1746	5460	131721
S/G/Y/R/B/O	NT_005999	AC121766	64233894	1			AC015521	64111297		113639	11882	3395	128916
S/G/Y/R/B/O	NT_005999	AC068089	64234214	1	chr3	NT_005999	AC132007	64386485	3	25433	6124	5930	37487
S/G/Y/R/B/O	NT_005999	AC068089	64234214	1			AC015475	64234214		84025	18263	13027	115315
S/G/Y/R/B/O	NT_005999	AC068089	64234214	1			AC015521	64234214		71633	11741	7310	90684
S/G/Y/R/B/O	NT_005999	AC132007	64386485	3	chr3	NT_005999	AC104331	64456185	3	0	1929	0	1929
S/G/Y/R/B/O	NT_005999	AC104331	64456185	3	chr3	NT_005999	AC121493	64655301	3	43784	0	0	43784
S/G/Y/R/B/O	NT_005999	AC121493	64655301	3	chr3	NT_005999	AC112516	64790156	3	52275	0	0	52275
S/G/Y/R/B/O	NT_005999	AC112516	64790156	3	chr3	NT_005999	AC104438	64922749	3	0	0	0	0
S/G/Y/R/B/O	NT_005999	AC104438	64922749	3	chr3	NT_005999	AC133438	65030444	3	0	0	1831	1831
S/G/Y/R/B/O	NT_005999	AC104438	64922749	3	chr3	NT_005999	AC132809	65035864	1	114458	0	0	114458
S/G/Y/R/B/O	NT_005999	AC133438	65030444	3	chr3	NT_005999	AC132809	65035864	1	0	0	0	0
S/G/Y/R/B/O	NT_005999	AC132809	65035864	1	chr3	NT_005999	AC099058	65083997	3	12662	0	0	12662
S/G/Y/R/B/O	NT_005999	AC132809	65035864	1	chr3	NT_005999	AC104438	64922749	3	114458	0	0	114458
S/G/Y/R/B/O	NT_005999	AC099058	65083997	3	chr3	NT_005999	AC025589	65280620	3	0	0	83332	83332
S/G/Y/R/B/O	NT_005999	AC025589	65280620	3	chr3	NT_005999	AC106827	65369641	3	62881	0	0	62881
S/G/Y/R/B/O	NT_005999	AC106827	65369641	3

NT_022473

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022473	AC092034	65763183	3	chr3	NT_022473	AC099665	65917262	3	0	0	0	0
S/G/Y/R/B/O	NT_022473	AC092034	65763183	3			AC022894	65280620		86723	5010	6346	98079
S/G/Y/R/B/O	NT_022473	AC099665	65917262	3	chr3	NT_022473	AC104440	66109325	3	0	0	204	204
S/G/Y/R/B/O	NT_022473	AC104440	66109325	3	chr3	NT_022473	AC098969	66277488	3	29800	0	0	29800
S/G/Y/R/B/O	NT_022473	AC098969	66277488	3	chr3	NT_022473	AC092499	66406244	1	17218	0	0	17218
S/G/Y/R/B/O	NT_022473	AC092499	66406244	1	chr3	NT_022473	AC112222	66513641	3	0	0	0	0
S/G/Y/R/B/O	NT_022473	AC112222	66513641	3	chr3	NT_022473	AC112515	66664672	3	0	0	0	0
S/G/Y/R/B/O	NT_022473	AC112515	66664672	3	chr3	NT_022473	AC114401	66753494	3	0	0	0	0
S/G/Y/R/B/O	NT_022473	AC112515	66664672	3			AC133795	66277488		17503	0	0	17503
S/G/Y/R/B/O	NT_022473	AC114401	66753494	3	chr3	NT_022473	AC113169	66836244	3	89914	0	0	89914
S/G/Y/R/B/O	NT_022473	AC114401	66753494	3			AC024497	66277488		63446	0	6078	69524
S/G/Y/R/B/O	NT_022473	AC113169	66836244	3	chr3	NT_022473	AC112213	66958959	3	70472	0	0	70472
S/G/Y/R/B/O	NT_022473	AC113169	66836244	3			AC024497	66836244		23371	0	0	23371
S/G/Y/R/B/O	NT_022473	AC112213	66958959	3	chr3	NT_022473	AC099783	67083790	3	49774	0	0	49774
S/G/Y/R/B/O	NT_022473	AC099783	67083790	3	chr3	NT_022473	AC135321	67193813	3	108512	0	0	108512
S/G/Y/R/B/O	NT_022473	AC099783	67083790	3			AC092044	66836244		73569	0	0	73569
S/G/Y/R/B/O	NT_022473	AC135321	67193813	3	chr3	NT_022473	AC113171	67244859	3	17605	0	0	17605
S/G/Y/R/B/O	NT_022473	AC135321	67193813	3			AC021437	67193813		43453	0	0	43453
S/G/Y/R/B/O	NT_022473	AC135321	67193813	3			AC021437	67193813		43453	0	0	43453
S/G/Y/R/B/O	NT_022473	AC135321	67193813	3			AC092044	67193813		73569	0	0	73569
S/G/Y/R/B/O	NT_022473	AC135321	67193813	3			AC092044	67193813		73569	0	0	73569
S/G/Y/R/B/O	NT_022473	AC113171	67244859	3	chr3	NT_022473	AC092036	67427503	3	39048	0	0	39048
S/G/Y/R/B/O	NT_022473	AC113171	67244859	3	chr3	NT_022473	AC016935	67526158	1	30067	0	4589	34656
S/G/Y/R/B/O	NT_022473	AC113171	67244859	3			AC021437	67526158		59972	2823	13639	76434
S/G/Y/R/B/O	NT_022473	AC092036	67427503	3	chr3	NT_022473	AC016935	67526158	1	63112	0	0	63112
S/G/Y/R/B/O	NT_022473	AC016935	67526158	1
S/G/Y/R/B/O	NT_022473	AC016935	67526158	1	chr3	NT_022473	AC113171	67244859	3	30067	0	4589	34656

NT_022423

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022423	AC092416	67561354	3	chr3	NT_022423	AC107626	67586908	3	17706	0	0	17706
S/G/Y/R/B/O	NT_022423	AC107626	67586908	3	chr3	NT_022423	AC104443	67748675	3	132524	0	0	132524
S/G/Y/R/B/O	NT_022423	AC107626	67586908	3			AC112214	67748675		33064	0	0	33064
S/G/Y/R/B/O	NT_022423	AC104443	67748675	3	chr3	NT_022423	AC104167	67807459	3	0	0	0	0
S/G/Y/R/B/O	NT_022423	AC104167	67807459	3	chr3	NT_022423	AC126123	67936748	3	0	1589	0	1589
S/G/Y/R/B/O	NT_022423	AC104167	67807459	3			AC112214	67586908		125843	0	0	125843
S/G/Y/R/B/O	NT_022423	AC126123	67936748	3	chr3	NT_022423	AC096922	67976062	3	2297	0	0	2297
S/G/Y/R/B/O	NT_022423	AC096922	67976062	3	chr3	NT_022423	AC104166	68194714	3	33294	0	0	33294
S/G/Y/R/B/O	NT_022423	AC104166	68194714	3	chr3	NT_022423	AC109587	68333125	3	6258	0	0	6258
S/G/Y/R/B/O	NT_022423	AC109587	68333125	3	chr3	NT_022423	AC092060	68379674	3	0	0	0	0
S/G/Y/R/B/O	NT_022423	AC109587	68333125	3			AC012521	68333125		68580	0	30544	99124
S/G/Y/R/B/O	NT_022423	AC109587	68333125	3			AC067985	68333125		87595	10773	14326	112694
S/G/Y/R/B/O	NT_022423	AC092060	68379674	3	chr3	NT_022423	AC112221	68560894	3	3570	0	0	3570
S/G/Y/R/B/O	NT_022423	AC092060	68379674	3			AC012521	68194714		77352	1721	5511	84584
S/G/Y/R/B/O	NT_022423	AC092060	68379674	3			AC067985	68194714		127673	10773	2597	141043
S/G/Y/R/B/O	NT_022423	AC112221	68560894	3	chr3	NT_022423	AC135851	68708692	3	0	0	0	0
S/G/Y/R/B/O	NT_022423	AC135851	68708692	3	chr3	NT_022423	AC112212	68762063	3	69707	0	0	69707
S/G/Y/R/B/O	NT_022423	AC135851	68708692	3			AC023214	68379674		134891	8109	2155	145155
S/G/Y/R/B/O	NT_022423	AC112212	68762063	3	chr3	NT_022423	AC099328	68930815	3	72969	0	0	72969
S/G/Y/R/B/O	NT_022423	AC112212	68762063	3			AC023214	68762063		69698	0	0	69698
S/G/Y/R/B/O	NT_022423	AC099328	68930815	3	chr3	NT_022423	AC104445	69013912	3	21354	0	0	21354
S/G/Y/R/B/O	NT_022423	AC104445	69013912	3	chr3	NT_022423	AC124915	69193731	1	106328	0	0	106328
S/G/Y/R/B/O	NT_022423	AC124915	69193731	1	chr3	NT_022423	AC099326	69193853	3	68289	0	0	68289
S/G/Y/R/B/O	NT_022423	AC124915	69193731	1			AC010959	69193731		54907	0	9296	64203
S/G/Y/R/B/O	NT_022423	AC099326	69193853	3	chr3	NT_022423	AC104449	69346625	3	61944	0	0	61944
S/G/Y/R/B/O	NT_022423	AC099326	69193853	3			AC010959	197993272		110641	2002	38930	151573
S/G/Y/R/B/O	NT_022423	AC104449	69346625	3	chr3	NT_022423	AC099666	69367247	3	85734	0	0	85734
S/G/Y/R/B/O	NT_022423	AC104449	69346625	3			AC010959	69193731		38629	2002	21131	61762
S/G/Y/R/B/O	NT_022423	AC104449	69346625	3			AC024717	69193731		65866	2756	4109	72731
S/G/Y/R/B/O	NT_022423	AC099666	69367247	3
S/G/Y/R/B/O	NT_022423	AC099666	69367247	3			AC024717	69367247		127842	2756	8929	139527

NT_037570

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037570	AC134025	69536565	3
S/G/Y/R/B/O	NT_037570	AC134025	69536565	3	chr3	NT_037571	AC105266	69774096	3	113016	0	0	113016

NT_037571

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037571	AC121765	69729676	3	chr3	NT_037571	AC105266	69774096	3	0	0	149621	149621
S/G/Y/R/B/O	NT_037571	AC105266	69774096	3	chr3	NT_037571	AC007870	69955558	3	47364	0	0	47364
S/G/Y/R/B/O	NT_037571	AC105266	69774096	3	chr3	NT_037570	AC134025	69536565	3	113016	0	0	113016
S/G/Y/R/B/O	NT_037571	AC007870	69955558	3	chr3	NT_037571	AC124046	70042898	3	0	0	0	0
S/G/Y/R/B/O	NT_037571	AC124046	70042898	3	chr3	NT_037571	AC104633	70180557	3	108901	0	0	108901
S/G/Y/R/B/O	NT_037571	AC104633	70180557	3	chr3	NT_037571	AC104644	70231828	3	0	0	1610	1610
S/G/Y/R/B/O	NT_037571	AC104644	70231828	3

NT_005526

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005526	AC012019	70279098	1	chr3	NT_005526	AC096971	70355036	3	95283	1800	0	97083
S/G/Y/R/B/O	NT_005526	AC012019	70279098	1			AC018533	70180557		20378	5604	21850	47832
S/G/Y/R/B/O	NT_005526	AC096971	70355036	3	chr3	NT_005526	AC103586	70512120	3	6769	0	0	6769
S/G/Y/R/B/O	NT_005526	AC096971	70355036	3			AC018533	70279098		26555	1975	17812	46342
S/G/Y/R/B/O	NT_005526	AC096971	70355036	3			AC069298	70279098		44817	0	0	44817
S/G/Y/R/B/O	NT_005526	AC103586	70512120	3	chr3	NT_005526	AC097632	70686769	3	17944	0	0	17944
S/G/Y/R/B/O	NT_005526	AC103586	70512120	3			AC022074	70512120		56197	0	52137	108334
S/G/Y/R/B/O	NT_005526	AC103586	70512120	3			AC069298	70512120		119970	0	0	119970
S/G/Y/R/B/O	NT_005526	AC103586	70512120	3			AC069425	70512120		100476	7141	13010	120627
S/G/Y/R/B/O	NT_005526	AC097632	70686769	3	chr3	NT_005526	AC069204	70800615	1	53612	2462	26352	82426
S/G/Y/R/B/O	NT_005526	AC097632	70686769	3			AC022074	70686769		46771	0	11702	58473
S/G/Y/R/B/O	NT_005526	AC097632	70686769	3			AC069425	70800615		79400	6548	5651	91599
S/G/Y/R/B/O	NT_005526	AC069204	70800615	1	chr3	NT_005526	AC104442	70870266	3	28932	2354	21369	52655
S/G/Y/R/B/O	NT_005526	AC069204	70800615	1			AC069425	70512120		41998	8956	4502	55456
S/G/Y/R/B/O	NT_005526	AC069204	70800615	1			AC079166	70512120		32908	2348	4439	39695
S/G/Y/R/B/O	NT_005526	AC104442	70870266	3	chr3	NT_005526	AC104645	71089493	1	53897	0	0	53897
S/G/Y/R/B/O	NT_005526	AC104442	70870266	3			AC079166	70800615		139337	0	26461	165798
S/G/Y/R/B/O	NT_005526	AC104645	71089493	1	chr3	NT_005526	AC097634	71153572	3	36041	0	0	36041
S/G/Y/R/B/O	NT_005526	AC104645	71089493	1			AC011326	71089493		19791	0	0	19791
S/G/Y/R/B/O	NT_005526	AC104645	71089493	1			AC079166	71089493		18158	0	0	18158
S/G/Y/R/B/O	NT_005526	AC097634	71153572	3	chr3	NT_005526	AC134770	71347125	1	32777	2760	35680	71217
S/G/Y/R/B/O	NT_005526	AC097634	71153572	3			AC011326	70870266		150459	0	21094	171553
S/G/Y/R/B/O	NT_005526	AC097634	71153572	3			AC068990	70870266		82074	0	0	82074
S/G/Y/R/B/O	NT_005526	AC134770	71347125	1	chr3	NT_005526	AC096970	71404545	3	16929	0	0	16929
S/G/Y/R/B/O	NT_005526	AC134770	71347125	1			AC011326	71347125		64767	2750	2965	70482
S/G/Y/R/B/O	NT_005526	AC134770	71347125	1			AC068990	71347125		79323	1554	59976	140853
S/G/Y/R/B/O	NT_005526	AC096970	71404545	3	chr3	NT_005526	AC107623	71575842	3	78452	0	0	78452
S/G/Y/R/B/O	NT_005526	AC096970	71404545	3			AC116352	71575842		34939	1789	32694	69422
S/G/Y/R/B/O	NT_005526	AC107623	71575842	3	chr3	NT_005526	AC105265	71674291	1	56987	0	0	56987
S/G/Y/R/B/O	NT_005526	AC107623	71575842	3			AC105938	71674291		47114	0	0	47114
S/G/Y/R/B/O	NT_005526	AC107623	71575842	3			AC116352	71674291		28892	0	30357	59249
S/G/Y/R/B/O	NT_005526	AC105265	71674291	1	chr3	NT_005526	AC112219	71795421	3	13698	0	0	13698
S/G/Y/R/B/O	NT_005526	AC105265	71674291	1			AC105938	71674291		15039	0	0	15039
S/G/Y/R/B/O	NT_005526	AC112219	71795421	3	chr3	NT_005526	AC134508	71937195	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005526	AC134508	71937195	3	chr3	NT_005526	AC104330	71984508	3	0	2001	0	2001
S/G/Y/R/B/O	NT_005526	AC104330	71984508	3	chr3	NT_005526	AC104435	72162727	3	31320	0	0	31320
S/G/Y/R/B/O	NT_005526	AC104330	71984508	3			AC069212	71795421		75983	0	60961	136944
S/G/Y/R/B/O	NT_005526	AC104435	72162727	3	chr3	NT_005526	AC097369	72328247	3	130717	0	0	130717
S/G/Y/R/B/O	NT_005526	AC097369	72328247	3	chr3	NT_005526	AC134050	72401289	3	0	1476	0	1476
S/G/Y/R/B/O	NT_005526	AC134050	72401289	3	chr3	NT_005526	AC114876	72434546	3	7001	0	0	7001
S/G/Y/R/B/O	NT_005526	AC114876	72434546	3	chr3	NT_005526	AC098481	72606243	3	123789	0	0	123789
S/G/Y/R/B/O	NT_005526	AC114876	72434546	3			AC109997	72606243		104516	0	0	104516
S/G/Y/R/B/O	NT_005526	AC098481	72606243	3	chr3	NT_005526	AC103559	72709590	3	103236	0	0	103236
S/G/Y/R/B/O	NT_005526	AC098481	72606243	3			AC109997	72709590		17377	0	122841	140218
S/G/Y/R/B/O	NT_005526	AC103559	72709590	3	chr3	NT_005526	AC024152	72790441	1	0	0	0	0
S/G/Y/R/B/O	NT_005526	AC103559	72709590	3			AC023771	72434546		70556	2194	11722	84472
S/G/Y/R/B/O	NT_005526	AC103559	72709590	3			AC109997	72606243		17433	0	18374	35807
S/G/Y/R/B/O	NT_005526	AC024152	72790441	1	chr3	NT_005526	AC103560	72883000	3	61207	0	4681	65888
S/G/Y/R/B/O	NT_005526	AC024152	72790441	1			AC023771	72606243		30501	4184	17393	52078
S/G/Y/R/B/O	NT_005526	AC103560	72883000	3	chr3	NT_005526	AC024102	73069241	3	73889	0	0	73889
S/G/Y/R/B/O	NT_005526	AC024102	73069241	3	chr3	NT_005526	AC119731	73141452	3	2052	0	0	2052
S/G/Y/R/B/O	NT_005526	AC119731	73141452	3	chr3	NT_005526	AC117489	73186152	3	26088	0	0	26088
S/G/Y/R/B/O	NT_005526	AC117489	73186152	3	chr3	NT_005526	AC108725	73303740	3	0	2002	0	2002
S/G/Y/R/B/O	NT_005526	AC108725	73303740	3	chr3	NT_005526	AC108702	73386298	3	0	0	0	0
S/G/Y/R/B/O	NT_005526	AC108725	73303740	3			AC044918	73141452		59409	5346	15480	80235
S/G/Y/R/B/O	NT_005526	AC108702	73386298	3	chr3	NT_005526	AC112511	73557404	1	80621	0	0	80621
S/G/Y/R/B/O	NT_005526	AC108702	73386298	3			AC013792	73186152		129920	2576	22268	154764
S/G/Y/R/B/O	NT_005526	AC108702	73386298	3			AC044918	73186152		81470	9542	447	91459
S/G/Y/R/B/O	NT_005526	AC112511	73557404	1	chr3	NT_005526	AC119038	73557412	3	0	0	32354	32354
S/G/Y/R/B/O	NT_005526	AC112511	73557404	1			AC013792	73557404		44326	0	20579	64905
S/G/Y/R/B/O	NT_005526	AC112511	73557404	1			AC073518	73557404		53505	2679	26422	82606
S/G/Y/R/B/O	NT_005526	AC119038	73557412	3	chr3	NT_005526	AC128691	73732661	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005526	AC119038	73557412	3			AC073518	73557412		110052	2681	47579	160312
S/G/Y/R/B/O	NT_005526	AC128691	73732661	3	chr3	NT_005526	AC016930	73744301	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005526	AC016930	73744301	3	chr3	NT_005526	AC117458	73767511	3	2008	0	0	2008
S/G/Y/R/B/O	NT_005526	AC117458	73767511	3	chr3	NT_005526	AC016950	73866746	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005526	AC117458	73767511	3			AC013625	73732661		101233	0	0	101233
S/G/Y/R/B/O	NT_005526	AC016950	73866746	3	chr3	NT_005526	AC024222	74023957	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005526	AC016950	73866746	3			AC013625	73866746		57659	0	0	57659
S/G/Y/R/B/O	NT_005526	AC024222	74023957	3	chr3	NT_005526	AC128656	74058147	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005526	AC128656	74058147	3	chr3	NT_005526	AC128653	74089138	3	47972	0	0	47972
S/G/Y/R/B/O	NT_005526	AC128653	74089138	3	chr3	NT_005526	AC016945	74249926	3	0	0	2131	2131
S/G/Y/R/B/O	NT_005526	AC016945	74249926	3	chr3	NT_005526	AC073856	74341156	3	0	2431	0	2431
S/G/Y/R/B/O	NT_005526	AC016945	74249926	3			AC128640	74341156		60775	0	0	60775
S/G/Y/R/B/O	NT_005526	AC073856	74341156	3	chr3	NT_005526	AC108746	74518519	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005526	AC073856	74341156	3			AC078979	74249926		39958	5545	28688	74191
S/G/Y/R/B/O	NT_005526	AC073856	74341156	3			AC128640	74518519		38366	0	0	38366
S/G/Y/R/B/O	NT_005526	AC108746	74518519	3	chr3	NT_005526	AC119043	74585208	3	0	1997	0	1997
S/G/Y/R/B/O	NT_005526	AC119043	74585208	3	chr3	NT_005526	AC130003	74747231	3	0	1965	0	1965
S/G/Y/R/B/O	NT_005526	AC130003	74747231	3	chr3	NT_005526	AC117481	74875077	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005526	AC117481	74875077	3	chr3	NT_005526	AC131233	75011485	3	0	0	0	0
S/G/Y/R/B/O	NT_005526	AC131233	75011485	3	chr3	NT_005526	AF042089	75026882	3	0	0	0	0
S/G/Y/R/B/O	NT_005526	AF042089	75026882	3	chr3	NT_005526	AC131236	75076264	1	0	0	0	0
S/G/Y/R/B/O	NT_005526	AC131236	75076264	1	chr3	NT_005526	AC034203	75148934	3	43194	0	0	43194
S/G/Y/R/B/O	NT_005526	AC131236	75076264	1			AF165177	75148934		38857	0	21901	60758
S/G/Y/R/B/O	NT_005526	AC034203	75148934	3	chr3	NT_005526	AC133041	75254636	3	0	0	0	0
S/G/Y/R/B/O	NT_005526	AC133041	75254636	3	chr3	NT_005526	AC108724	75263166	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005526	AC108724	75263166	3	chr3	NT_005526	AL592170	75449939	3	0	0	0	0
S/G/Y/R/B/O	NT_005526	AC108724	75263166	3			AC012661	75449939		58644	0	2337	60981
S/G/Y/R/B/O	NT_005526	AC108724	75263166	3			AC133042	75254636		35023	8484	31398	74905
S/G/Y/R/B/O	NT_005526	AL592170	75449939	3
S/G/Y/R/B/O	NT_005526	AL592170	75449939	3			AC012661	75254636		58541	0	2312	60853
S/G/Y/R/B/O	NT_005526	AL592170	75449939	3			AC133042	75254636		35113	8497	31663	75273

NT_037572

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037572	AC133123	75459940	3	chr3	NT_037572	AC133793	75574020	3	2004	0	0	2004
S/G/Y/R/B/O	NT_037572	AC133793	75574020	3

NT_022446

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022446	AC126467	75595560	3	chr3	NT_022446	AC024256	75749524	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022446	AC126467	75595560	3			AC021866	75459940		18681	0	1965	20646
S/G/Y/R/B/O	NT_022446	AC126467	75595560	3			AC055114	75749524		51089	0	22963	74052
S/G/Y/R/B/O	NT_022446	AC024256	75749524	3	chr3	NT_022446	AC067717	75839529	3	2002	0	0	2002
S/G/Y/R/B/O	NT_022446	AC024256	75749524	3			AC021866	75749524		10934	1963	35909	48806
S/G/Y/R/B/O	NT_022446	AC067717	75839529	3	chr3	NT_022446	AC117514	76063758	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022446	AC067717	75839529	3			AC025613	75749524		165974	0	0	165974
S/G/Y/R/B/O	NT_022446	AC117514	76063758	3	chr3	NT_022446	AC026877	76076617	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022446	AC026877	76076617	3	chr3	NT_022446	AC016942	76273437	3	0	0	0	0
S/G/Y/R/B/O	NT_022446	AC026877	76076617	3			AC026962	75839529		128600	3654	21774	154028
S/G/Y/R/B/O	NT_022446	AC016942	76273437	3	chr3	NT_022446	AC131154	76421445	3	0	1997	0	1997
S/G/Y/R/B/O	NT_022446	AC016942	76273437	3			AC021084	76063758		13634	0	0	13634
S/G/Y/R/B/O	NT_022446	AC016942	76273437	3			AC119036	76063758		32415	0	0	32415
S/G/Y/R/B/O	NT_022446	AC131154	76421445	3	chr3	NT_022446	AC130004	76610793	3	2086	0	0	2086
S/G/Y/R/B/O	NT_022446	AC131154	76421445	3			AC021084	76273437		119299	0	0	119299
S/G/Y/R/B/O	NT_022446	AC131154	76421445	3			AC119036	76273437		55967	0	7778	63745
S/G/Y/R/B/O	NT_022446	AC131154	76421445	3			AL162871	117964151		41226	0	49681	90907
S/G/Y/R/B/O	NT_022446	AC130004	76610793	3	chr3	NT_022446	AC117515	76727406	3	0	1987	0	1987
S/G/Y/R/B/O	NT_022446	AC130004	76610793	3			AC021084	117964151		34742	0	0	34742
S/G/Y/R/B/O	NT_022446	AC130004	76610793	3			AL162871	76421445		61850	0	0	61850
S/G/Y/R/B/O	NT_022446	AC117515	76727406	3

NT_005882

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005882	AC131005	76862393	3	chr3	NT_005882	AC117516	77053624	3	0	2002	0	2002
S/G/Y/R/B/O	NT_005882	AC131005	76862393	3			AC015504	76610793		107122	0	15042	122164
S/G/Y/R/B/O	NT_005882	AC131005	76862393	3			AC108703	76610793		107576	0	26047	133623
S/G/Y/R/B/O	NT_005882	AC117516	77053624	3	chr3	NT_005882	AC133040	77224617	3	0	0	0	0
S/G/Y/R/B/O	NT_005882	AC117516	77053624	3	chr3	NT_005882	AC016952	77528852	1	67300	0	0	67300
S/G/Y/R/B/O	NT_005882	AC117516	77053624	3	chr3	NT_005882	AC016952	77528852	1	67300	0	0	67300
S/G/Y/R/B/O	NT_005882	AC133040	77224617	3	chr3	NT_005882	AC078859	77351950	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005882	AC133040	77224617	3	chr3	NT_005882	AC016952	77528852	1	14370	0	72118	86488
S/G/Y/R/B/O	NT_005882	AC133040	77224617	3			AC018776	77528852		21196	1574	3646	26416
S/G/Y/R/B/O	NT_005882	AC078859	77351950	3	chr3	NT_005882	AC016952	77528852	1	0	0	0	0
S/G/Y/R/B/O	NT_005882	AC078859	77351950	3			AC018776	77351950		60976	7790	43859	112625
S/G/Y/R/B/O	NT_005882	AC016952	77528852	1
S/G/Y/R/B/O	NT_005882	AC016952	77528852	1	chr3	NT_005882	AC117516	77053624	3	67300	0	0	67300
S/G/Y/R/B/O	NT_005882	AC016952	77528852	1	chr3	NT_005882	AC117516	77053624	3	67300	0	0	67300
S/G/Y/R/B/O	NT_005882	AC016952	77528852	1	chr3	NT_005882	AC133040	77224617	3	14370	0	72118	86488

NT_005684

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005684	AC134729	77546067	3	chr3	NT_005684	AC025616	77701800	1	37513	0	1362	38875
S/G/Y/R/B/O	NT_005684	AC134729	77546067	3			AC012402	77224617		68417	10644	11283	90344
S/G/Y/R/B/O	NT_005684	AC134729	77546067	3			AC012402	77224617		68417	10644	11283	90344
S/G/Y/R/B/O	NT_005684	AC025616	77701800	1	chr3	NT_005684	AC117462	77716006	3	39198	7478	0	46676
S/G/Y/R/B/O	NT_005684	AC117462	77716006	3	chr3	NT_005684	AC125621	77862859	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005684	AC117462	77716006	3			AC073144	77701800		45343	0	2257	47600
S/G/Y/R/B/O	NT_005684	AC125621	77862859	3	chr3	NT_005684	AC108752	77945998	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005684	AC125621	77862859	3			AC073144	77862859		54837	2053	21461	78351
S/G/Y/R/B/O	NT_005684	AC108752	77945998	3	chr3	NT_005684	AC112508	78111745	3	0	0	0	0
S/G/Y/R/B/O	NT_005684	AC108752	77945998	3			AC053483	77716006		79933	2051	2443	84427
S/G/Y/R/B/O	NT_005684	AC108752	77945998	3			AC125625	77862859		77405	0	0	77405
S/G/Y/R/B/O	NT_005684	AC112508	78111745	3	chr3	NT_005684	AC106720	78275942	3	0	0	0	0
S/G/Y/R/B/O	NT_005684	AC112508	78111745	3			AC016227	77862859		29541	0	0	29541
S/G/Y/R/B/O	NT_005684	AC112508	78111745	3			AC053483	77862859		44325	0	0	44325
S/G/Y/R/B/O	NT_005684	AC112508	78111745	3			AC125625	77862859		44393	0	0	44393
S/G/Y/R/B/O	NT_005684	AC106720	78275942	3	chr3	NT_005684	AC131008	78366292	2	0	0	0	0
S/G/Y/R/B/O	NT_005684	AC106720	78275942	3			AC016227	77862859		42250	2965	0	45215
S/G/Y/R/B/O	NT_005684	AC106720	78275942	3			AC027755	77862859		75554	0	558	76112
S/G/Y/R/B/O	NT_005684	AC106720	78275942	3			AC108728	77862859		75333	0	0	75333
S/G/Y/R/B/O	NT_005684	AC131008	78366292	2	chr3	NT_005684	AC108719	78369118	3	43088	0	0	43088
S/G/Y/R/B/O	NT_005684	AC131008	78366292	2	chr3	NT_005684	AC055731	78412206	3	10608	0	0	10608
S/G/Y/R/B/O	NT_005684	AC131008	78366292	2			AC012217	77862859		51999	0	0	51999
S/G/Y/R/B/O	NT_005684	AC131008	78366292	2			AC016227	77862859		42251	2965	0	45216
S/G/Y/R/B/O	NT_005684	AC131008	78366292	2			AC027755	77862859		119211	0	375	119586
S/G/Y/R/B/O	NT_005684	AC131008	78366292	2			AC108728	78369118		87735	0	0	87735
S/G/Y/R/B/O	NT_005684	AC108719	78369118	3	chr3	NT_005684	AC055731	78412206	3	2006	0	0	2006
S/G/Y/R/B/O	NT_005684	AC108719	78369118	3			AC012217	78369118		43397	0	0	43397
S/G/Y/R/B/O	NT_005684	AC108719	78369118	3			AC027755	78369118		32243	0	0	32243
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3	chr3	NT_005684	AC106718	78562737	3	2007	0	0	2007
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3	chr3	NT_005684	AC131008	78366292	2	10608	0	0	10608
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3			AC012217	78366292		106147	4846	35056	146049
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3			AC021069	78366292		48550	2177	54181	104908
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3			AC022664	78366292		21635	0	0	21635
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3			AC023947	78366292		48267	12022	11152	71441
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3			AC027755	78366292		18517	0	0	18517
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3			AC060795	78366292		38838	0	1069	39907
S/G/Y/R/B/O	NT_005684	AC055731	78412206	3			AC108728	78369118		18600	0	0	18600
S/G/Y/R/B/O	NT_005684	AC106718	78562737	3	chr3	NT_005684	AC016946	78693425	3	66005	0	0	66005
S/G/Y/R/B/O	NT_005684	AC106718	78562737	3			AC021069	78693425		13312	2714	7030	23056
S/G/Y/R/B/O	NT_005684	AC106718	78562737	3			AC022664	78693425		121008	0	11671	132679
S/G/Y/R/B/O	NT_005684	AC106718	78562737	3			AC023947	78693425		49251	13262	13314	75827
S/G/Y/R/B/O	NT_005684	AC106718	78562737	3			AC060795	78412206		79076	5859	7130	92065
S/G/Y/R/B/O	NT_005684	AC016946	78693425	3	chr3	NT_005684	AC123565	78788543	3	0	2004	0	2004
S/G/Y/R/B/O	NT_005684	AC016946	78693425	3			AC022664	78412206		54852	0	11676	66528
S/G/Y/R/B/O	NT_005684	AC016946	78693425	3			AC060795	78412206		14415	5859	1446	21720
S/G/Y/R/B/O	NT_005684	AC123565	78788543	3	chr3	NT_005684	AC119035	78940698	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005684	AC123565	78788543	3			AC020574	78693425		62042	1714	66981	130737
S/G/Y/R/B/O	NT_005684	AC123565	78788543	3			AC020574	78693425		62042	1714	66981	130737
S/G/Y/R/B/O	NT_005684	AC123565	78788543	3			AC093504	78693425		64785	0	55808	120593
S/G/Y/R/B/O	NT_005684	AC123565	78788543	3			AC093504	78693425		64785	0	55808	120593
S/G/Y/R/B/O	NT_005684	AC119035	78940698	3	chr3	NT_005684	AC117461	79110879	3	100033	0	0	100033
S/G/Y/R/B/O	NT_005684	AC119035	78940698	3			AC020574	78940698		39546	0	0	39546
S/G/Y/R/B/O	NT_005684	AC119035	78940698	3			AC084362	78940698		42174	5442	48079	95695
S/G/Y/R/B/O	NT_005684	AC117461	79110879	3	chr3	NT_005684	AC117479	79165645	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005684	AC117461	79110879	3			AC084362	78788543		70136	7435	47169	124740
S/G/Y/R/B/O	NT_005684	AC117479	79165645	3	chr3	NT_005684	AC125815	79306927	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005684	AC125815	79306927	3

NT_022459

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022459	AC125766	79356918	3	chr3	NT_022459	AC125624	79476216	3	0	1994	0	1994
S/G/Y/R/B/O	NT_022459	AC125624	79476216	3	chr3	NT_022459	AC023122	79652145	3	32206	0	0	32206
S/G/Y/R/B/O	NT_022459	AC125624	79476216	3			AC026852	79652145		119024	2446	12688	134158
S/G/Y/R/B/O	NT_022459	AC023122	79652145	3	chr3	NT_022459	AC106726	79798505	3	0	0	7457	7457
S/G/Y/R/B/O	NT_022459	AC023122	79652145	3			AC016220	79356918		26363	0	22379	48742
S/G/Y/R/B/O	NT_022459	AC023122	79652145	3			AC026852	79356918		28868	2445	0	31313
S/G/Y/R/B/O	NT_022459	AC106726	79798505	3	chr3	NT_022459	AC107309	79991225	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022459	AC106726	79798505	3			AC016220	79476216		63249	0	2347	65596
S/G/Y/R/B/O	NT_022459	AC106726	79798505	3			AC036139	79652145		117651	12899	43624	174174
S/G/Y/R/B/O	NT_022459	AC107309	79991225	3	chr3	NT_022459	AC123022	80009494	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022459	AC123022	80009494	3	chr3	NT_022459	AC108740	80159885	3	100693	0	0	100693
S/G/Y/R/B/O	NT_022459	AC123022	80009494	3			AC060778	80009494		75864	8419	13714	97997
S/G/Y/R/B/O	NT_022459	AC108740	80159885	3	chr3	NT_022459	AC108690	80192900	3	9249	0	0	9249
S/G/Y/R/B/O	NT_022459	AC108740	80159885	3			AC060778	80159885		60285	3357	6982	70624
S/G/Y/R/B/O	NT_022459	AC108690	80192900	3	chr3	NT_022459	AC067738	80378645	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022459	AC108690	80192900	3			AC012298	80009494		33347	0	11627	44974
S/G/Y/R/B/O	NT_022459	AC108690	80192900	3			AC061986	80009494		135976	11972	1416	149364
S/G/Y/R/B/O	NT_022459	AC108690	80192900	3			AC076963	80378645		90103	5851	34450	130404
S/G/Y/R/B/O	NT_022459	AC067738	80378645	3	chr3	NT_022459	AC068756	80459524	3	0	1997	0	1997
S/G/Y/R/B/O	NT_022459	AC067738	80378645	3			AC012298	80159885		13591	0	0	13591
S/G/Y/R/B/O	NT_022459	AC067738	80378645	3			AC076963	80459524		17120	2455	1799	21374
S/G/Y/R/B/O	NT_022459	AC067738	80378645	3			AC116442	80192900		21520	0	0	21520
S/G/Y/R/B/O	NT_022459	AC068756	80459524	3	chr3	NT_022459	AC128715	80538839	3	0	0	1754	1754
S/G/Y/R/B/O	NT_022459	AC068756	80459524	3			AC116442	80378645		75737	0	0	75737
S/G/Y/R/B/O	NT_022459	AC128715	80538839	3	chr3	NT_022459	AC129677	80635684	3	0	1998	0	1998
S/G/Y/R/B/O	NT_022459	AC129677	80635684	3	chr3	NT_022459	AC099664	80706871	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022459	AC099664	80706871	3	chr3	NT_022459	AC099542	80862093	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC099664	80706871	3			AC024967	80538839		65090	1580	23911	90581
S/G/Y/R/B/O	NT_022459	AC099664	80706871	3			AC134884	80635684		11279	4963	9461	25703
S/G/Y/R/B/O	NT_022459	AC099542	80862093	3	chr3	NT_022459	AC107302	81030902	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC099542	80862093	3			AC023945	80635684		51890	0	6641	58531
S/G/Y/R/B/O	NT_022459	AC107302	81030902	3	chr3	NT_022459	AC099049	81163590	3	91309	0	0	91309
S/G/Y/R/B/O	NT_022459	AC107302	81030902	3			AC022071	80635684		82638	1512	32453	116603
S/G/Y/R/B/O	NT_022459	AC107302	81030902	3			AC023945	80635684		129386	15561	32605	177552
S/G/Y/R/B/O	NT_022459	AC099049	81163590	3	chr3	NT_022459	AC025029	81252619	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC099049	81163590	3			AC022071	81163590		42419	0	28828	71247
S/G/Y/R/B/O	NT_022459	AC099049	81163590	3			AC023945	81163590		51410	7891	21122	80423
S/G/Y/R/B/O	NT_022459	AC025029	81252619	3	chr3	NT_022459	AC017015	81341155	3	2046	0	0	2046
S/G/Y/R/B/O	NT_022459	AC017015	81341155	3	chr3	NT_022459	AC107030	81504664	3	76854	0	0	76854
S/G/Y/R/B/O	NT_022459	AC017015	81341155	3			AC068386	81252619		45731	0	20587	66318
S/G/Y/R/B/O	NT_022459	AC017015	81341155	3			AC129729	81504664		88508	0	0	88508
S/G/Y/R/B/O	NT_022459	AC107030	81504664	3	chr3	NT_022459	AC129807	81598898	3	0	1998	0	1998
S/G/Y/R/B/O	NT_022459	AC107030	81504664	3			AC068386	81341155		116596	9035	28577	154208
S/G/Y/R/B/O	NT_022459	AC129807	81598898	3	chr3	NT_022459	AC119735	81663988	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022459	AC129807	81598898	3			AC073164	81598898		67089	0	0	67089
S/G/Y/R/B/O	NT_022459	AC129807	81598898	3			AC130255	81663988		67082	0	0	67082
S/G/Y/R/B/O	NT_022459	AC119735	81663988	3	chr3	NT_022459	AC074269	81731941	3	0	1953	0	1953
S/G/Y/R/B/O	NT_022459	AC074269	81731941	3	chr3	NT_022459	AC112509	81912789	3	2873	0	0	2873
S/G/Y/R/B/O	NT_022459	AC112509	81912789	3	chr3	NT_022459	AC018449	82019917	3	2463	0	0	2463
S/G/Y/R/B/O	NT_022459	AC018449	82019917	3	chr3	NT_022459	AC128655	82174875	3	2002	0	0	2002
S/G/Y/R/B/O	NT_022459	AC128655	82174875	3	chr3	NT_022459	AC108743	82258884	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC108743	82258884	3	chr3	NT_022459	AC107295	82402566	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC108743	82258884	3			AC021982	82019917		14360	2666	1416	18442
S/G/Y/R/B/O	NT_022459	AC107295	82402566	3	chr3	NT_022459	AC117506	82488565	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022459	AC107295	82402566	3			AC021982	82019917		20410	2672	13072	36154
S/G/Y/R/B/O	NT_022459	AC107295	82402566	3			AC119738	82488565		17720	0	0	17720
S/G/Y/R/B/O	NT_022459	AC117506	82488565	3	chr3	NT_022459	AC107307	82506554	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022459	AC107307	82506554	3	chr3	NT_022459	AC107301	82662620	3	0	1925	0	1925
S/G/Y/R/B/O	NT_022459	AC107307	82506554	3			AC025807	82506554		117364	4798	9196	131358
S/G/Y/R/B/O	NT_022459	AC107301	82662620	3	chr3	NT_022459	AC125610	82834968	3	13715	0	0	13715
S/G/Y/R/B/O	NT_022459	AC107301	82662620	3			AC022981	82488565		133052	5346	4730	143128
S/G/Y/R/B/O	NT_022459	AC125610	82834968	3	chr3	NT_022459	AC023503	82992670	3	2003	0	0	2003
S/G/Y/R/B/O	NT_022459	AC125610	82834968	3			AC068360	82992670		110188	10935	4502	125625
S/G/Y/R/B/O	NT_022459	AC023503	82992670	3	chr3	NT_022459	AC018918	83153040	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022459	AC023503	82992670	3			AC034152	83153040		60431	3677	35576	99684
S/G/Y/R/B/O	NT_022459	AC018918	83153040	3	chr3	NT_022459	AC119037	83209186	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC018918	83153040	3			AC019112	82834968		13953	4025	7655	25633
S/G/Y/R/B/O	NT_022459	AC119037	83209186	3	chr3	NT_022459	AC117426	83370934	3	104502	0	0	104502
S/G/Y/R/B/O	NT_022459	AC119037	83209186	3			AC019112	82992670		56703	8450	53258	118411
S/G/Y/R/B/O	NT_022459	AC117426	83370934	3	chr3	NT_022459	AC129415	83417032	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC117426	83370934	3			AC019112	83370934		29502	4425	27159	61086
S/G/Y/R/B/O	NT_022459	AC117426	83370934	3			AC073207	83370934		32357	808	0	33165
S/G/Y/R/B/O	NT_022459	AC129415	83417032	3	chr3	NT_022459	AC092825	83523139	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022459	AC092825	83523139	3	chr3	NT_022459	AC117464	83680981	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022459	AC092825	83523139	3			AC092450	83523139		48021	789	24849	73659
S/G/Y/R/B/O	NT_022459	AC117464	83680981	3	chr3	NT_022459	AC119741	83833704	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC117464	83680981	3			AC073985	83417032		23433	5565	27979	56977
S/G/Y/R/B/O	NT_022459	AC119741	83833704	3	chr3	NT_022459	AC119728	83998934	3	2001	0	0	2001
S/G/Y/R/B/O	NT_022459	AC119728	83998934	3	chr3	NT_022459	AC108696	84024536	3	0	1996	0	1996
S/G/Y/R/B/O	NT_022459	AC108696	84024536	3	chr3	NT_022459	AC116303	84179876	3	2006	0	0	2006
S/G/Y/R/B/O	NT_022459	AC108696	84024536	3			AC022941	83833704		91117	2141	0	93258
S/G/Y/R/B/O	NT_022459	AC116303	84179876	3	chr3	NT_022459	AC107025	84228940	3	0	0	0	0
S/G/Y/R/B/O	NT_022459	AC107025	84228940	3	chr3	NT_022459	AC117482	84404968	3	41327	0	0	41327
S/G/Y/R/B/O	NT_022459	AC107025	84228940	3			AC023547	84024536		99824	6696	32139	138659
S/G/Y/R/B/O	NT_022459	AC117482	84404968	3	chr3	NT_022459	AC119039	84532879	3	0	1988	0	1988
S/G/Y/R/B/O	NT_022459	AC117482	84404968	3			AC019145	84404968		30210	1990	25192	57392
S/G/Y/R/B/O	NT_022459	AC117482	84404968	3			AC023547	84404968		28153	0	0	28153
S/G/Y/R/B/O	NT_022459	AC119039	84532879	3	chr3	NT_022459	AC025551	84633384	1	59932	0	0	59932
S/G/Y/R/B/O	NT_022459	AC119039	84532879	3			AC019145	84532879		39594	0	12059	51653
S/G/Y/R/B/O	NT_022459	AC025551	84633384	1	chr3	NT_022459	AC132660	84648452	3	38339	0	3620	41959
S/G/Y/R/B/O	NT_022459	AC025551	84633384	1	chr3	NT_022459	AC023600	84710710	3	24651	0	0	24651
S/G/Y/R/B/O	NT_022459	AC025551	84633384	1			AC019145	84404968		30547	0	22821	53368
S/G/Y/R/B/O	NT_022459	AC025551	84633384	1			AC026103	84710710		68708	1081	22851	92640
S/G/Y/R/B/O	NT_022459	AC132660	84648452	3	chr3	NT_022459	AC023600	84710710	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022459	AC132660	84648452	3			AC026103	84633384		24355	0	0	24355
S/G/Y/R/B/O	NT_022459	AC132660	84648452	3			AC026103	84633384		24355	0	0	24355
S/G/Y/R/B/O	NT_022459	AC023600	84710710	3	chr3	NT_022459	AC107026	84896036	3	0	1144	0	1144
S/G/Y/R/B/O	NT_022459	AC023600	84710710	3	chr3	NT_022459	AC025551	84633384	1	24651	0	0	24651
S/G/Y/R/B/O	NT_022459	AC023600	84710710	3			AC026103	84633384		28003	0	0	28003
S/G/Y/R/B/O	NT_022459	AC107026	84896036	3	chr3	NT_022459	AC108700	85087950	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022459	AC107026	84896036	3			AC011678	84648452		19442	0	902	20344
S/G/Y/R/B/O	NT_022459	AC107026	84896036	3			AC018911	84648452		140873	0	1996	142869
S/G/Y/R/B/O	NT_022459	AC108700	85087950	3	chr3	NT_022459	AC018361	85225280	3	16035	0	0	16035
S/G/Y/R/B/O	NT_022459	AC108700	85087950	3			AC011678	85087950		139306	6785	6935	153026
S/G/Y/R/B/O	NT_022459	AC018361	85225280	3	chr3	NT_022459	AC119729	85369786	3	0	1997	0	1997
S/G/Y/R/B/O	NT_022459	AC018361	85225280	3			AC011678	84896036		16029	0	0	16029
S/G/Y/R/B/O	NT_022459	AC119729	85369786	3	chr3	NT_022459	AC117452	85495633	3	52363	0	0	52363
S/G/Y/R/B/O	NT_022459	AC119729	85369786	3			AC017055	85369786		38553	2514	7483	48550
S/G/Y/R/B/O	NT_022459	AC117452	85495633	3	chr3	NT_022459	AC119726	85636555	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022459	AC117452	85495633	3			AC017055	85495633		110249	6490	21120	137859
S/G/Y/R/B/O	NT_022459	AC119726	85636555	3

NT_006031

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_006031	AC134650	85706398	3	chr3	NT_006031	AC107024	85720551	3	0	0	0	0
S/G/Y/R/B/O	NT_006031	AC107024	85720551	3	chr3	NT_006031	AC128654	85900767	3	0	1999	0	1999
S/G/Y/R/B/O	NT_006031	AC107024	85720551	3			AC013496	85495633		98663	14048	10331	123042
S/G/Y/R/B/O	NT_006031	AC128654	85900767	3	chr3	NT_006031	AC108733	85932382	3	2005	0	0	2005
S/G/Y/R/B/O	NT_006031	AC108733	85932382	3
S/G/Y/R/B/O	NT_006031	AC108733	85932382	3			AC053542	85932382		38422	15837	27182	81441

NT_022419

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022419	AC120305	86111557	3	chr3	NT_022419	AC117451	86206791	3	0	1997	0	1997
S/G/Y/R/B/O	NT_022419	AC117451	86206791	3	chr3	NT_022419	AC119739	86386430	3	0	0	0	0
S/G/Y/R/B/O	NT_022419	AC119739	86386430	3	chr3	NT_022419	AC117512	86411584	3	0	0	0	0
S/G/Y/R/B/O	NT_022419	AC117512	86411584	3	chr3	NT_022419	AC108706	86434606	3	2006	0	0	2006
S/G/Y/R/B/O	NT_022419	AC108706	86434606	3
S/G/Y/R/B/O	NT_022419	AC108706	86434606	3			AC012299	86434606		25851	2184	0	28035

NT_022642

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022642	AC131147	89696812	3	chr3	NT_022642	AC108709	89745061	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022642	AC108709	89745061	3	chr3	NT_022642	AC107204	89922279	3	0	0	0	0
S/G/Y/R/B/O	NT_022642	AC108709	89745061	3			AC012221	89745061		23807	0	77446	101253
S/G/Y/R/B/O	NT_022642	AC108709	89745061	3			AC027756	89745061		81180	0	14947	96127
S/G/Y/R/B/O	NT_022642	AC107204	89922279	3	chr3	NT_022642	AC123511	89969016	3	2120	0	0	2120
S/G/Y/R/B/O	NT_022642	AC107204	89922279	3			AC012221	89696812		23724	0	22248	45972
S/G/Y/R/B/O	NT_022642	AC107204	89922279	3			AC027756	89696812		113408	1446	15017	129871
S/G/Y/R/B/O	NT_022642	AC123511	89969016	3	chr3	NT_022642	AC130885	90063306	3	2089	0	0	2089
S/G/Y/R/B/O	NT_022642	AC123511	89969016	3			AC024147	89969016		66781	0	7659	74440
S/G/Y/R/B/O	NT_022642	AC130885	90063306	3	chr3	NT_022642	AC128692	90226543	3	39714	0	0	39714
S/G/Y/R/B/O	NT_022642	AC130885	90063306	3			AC024147	90063306		33440	0	13118	46558
S/G/Y/R/B/O	NT_022642	AC130885	90063306	3			AC025367	90063306		85012	17689	0	102701
S/G/Y/R/B/O	NT_022642	AC130885	90063306	3			AC110996	90063306		51772	0	37199	88971
S/G/Y/R/B/O	NT_022642	AC128692	90226543	3	chr3	NT_022642	AC116546	90270371	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022642	AC128692	90226543	3			AC025367	90226543		23293	6332	2335	31960
S/G/Y/R/B/O	NT_022642	AC128692	90226543	3			AC110996	90226543		26996	0	0	26996
S/G/Y/R/B/O	NT_022642	AC116546	90270371	3	chr3	NT_022642	AC108749	90428787	3	0	0	0	0
S/G/Y/R/B/O	NT_022642	AC116546	90270371	3			AC037430	90063306		51284	0	1444	52728
S/G/Y/R/B/O	NT_022642	AC108749	90428787	3	chr3	NT_022642	AC117513	90574416	3	0	0	99485	99485
S/G/Y/R/B/O	NT_022642	AC117513	90574416	3	chr3	NT_022642	AC119034	90623418	3	18118	0	0	18118
S/G/Y/R/B/O	NT_022642	AC117513	90574416	3			AC024427	90574416		11047	7431	2294	20772
S/G/Y/R/B/O	NT_022642	AC119034	90623418	3	chr3	NT_022642	AC132004	90795063	3	0	1996	0	1996
S/G/Y/R/B/O	NT_022642	AC119034	90623418	3			AC011042	90623418		32289	0	0	32289
S/G/Y/R/B/O	NT_022642	AC119034	90623418	3			AC024427	90623418		42908	10200	14071	67179
S/G/Y/R/B/O	NT_022642	AC119034	90623418	3			AC027015	90623418		36194	0	1233	37427
S/G/Y/R/B/O	NT_022642	AC119034	90623418	3			AC107616	90623418		75342	0	0	75342
S/G/Y/R/B/O	NT_022642	AC132004	90795063	3	chr3	NT_022642	AC119733	90817055	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022642	AC119733	90817055	3	chr3	NT_022642	AC128650	90971858	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022642	AC119733	90817055	3			AC011042	90817055		27205	0	13608	40813
S/G/Y/R/B/O	NT_022642	AC119733	90817055	3			AC027015	90817055		21245	0	0	21245
S/G/Y/R/B/O	NT_022642	AC119733	90817055	3			AC107616	90817055		48699	0	16858	65557
S/G/Y/R/B/O	NT_022642	AC128650	90971858	3	chr3	NT_022642	AC126475	91089844	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022642	AC126475	91089844	3	chr3	NT_022642	AC108750	91200089	3	0	2837	0	2837
S/G/Y/R/B/O	NT_022642	AC126475	91089844	3			AC021123	91089844		63554	2010	12070	77634
S/G/Y/R/B/O	NT_022642	AC108750	91200089	3
S/G/Y/R/B/O	NT_022642	AC108750	91200089	3			AC021123	90971858		58989	7519	6821	73329

NT_022435

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022435	AC131153	91365573	3	chr3	NT_022435	AC128651	91480997	1	0	0	11192	11192
S/G/Y/R/B/O	NT_022435	AC131153	91365573	3			AC117448	91089844		36981	0	11361	48342
S/G/Y/R/B/O	NT_022435	AC128651	91480997	1	chr3	NT_022435	AC119724	91595236	3	0	0	44979	44979
S/G/Y/R/B/O	NT_022435	AC128651	91480997	1			AC023127	91480997		37218	2565	19708	59491
S/G/Y/R/B/O	NT_022435	AC119724	91595236	3	chr3	NT_022435	AC106715	91741956	3	2003	0	0	2003
S/G/Y/R/B/O	NT_022435	AC119724	91595236	3			AC023127	91365573		25900	0	4658	30558
S/G/Y/R/B/O	NT_022435	AC106715	91741956	3
S/G/Y/R/B/O	NT_022435	AC106715	91741956	3			AC025799	91480997		114173	0	8701	122874

NT_022497

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022497	AC109129	91902177	3	chr3	NT_022497	AC107028	92083335	3	60820	0	0	60820
S/G/Y/R/B/O	NT_022497	AC109129	91902177	3			AC048381	91595236		45810	8035	2737	56582
S/G/Y/R/B/O	NT_022497	AC109129	91902177	3			AC053541	91595236		98032	2514	37179	137725
S/G/Y/R/B/O	NT_022497	AC107028	92083335	3	chr3	NT_022497	AC026305	92208054	3	0	0	2534	2534
S/G/Y/R/B/O	NT_022497	AC107028	92083335	3			AC011668	92083335		37792	0	24517	62309
S/G/Y/R/B/O	NT_022497	AC107028	92083335	3			AC048381	92208054		126093	24162	8518	158773
S/G/Y/R/B/O	NT_022497	AC107028	92083335	3			AC053541	92208054		53854	2514	2269	58637
S/G/Y/R/B/O	NT_022497	AC026305	92208054	3
S/G/Y/R/B/O	NT_022497	AC026305	92208054	3			AC011668	91902177		87546	2659	3253	93458

NT_037573

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037573	AC069083	92319192	1	chr3	NT_037573	AC068757	92349157	3	18249	0	9657	27906
S/G/Y/R/B/O	NT_037573	AC069083	92319192	1			AC133478	92589070		10592	602	9705	20899
S/G/Y/R/B/O	NT_037573	AC068757	92349157	3	chr3	NT_037573	AC095349	92589070	3	0	0	0	0
S/G/Y/R/B/O	NT_037573	AC095349	92589070	3

NT_022475

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022475	AC117474	92803456	3	chr3	NT_022475	AC130896	92947616	3	2003	0	0	2003
S/G/Y/R/B/O	NT_022475	AC117474	92803456	3			AC112171	92319192		77222	0	59625	136847
S/G/Y/R/B/O	NT_022475	AC117474	92803456	3			AC131214	92947616		36107	0	29306	65413
S/G/Y/R/B/O	NT_022475	AC130896	92947616	3	chr3	NT_022475	AC019233	93027672	3	2009	0	0	2009
S/G/Y/R/B/O	NT_022475	AC130896	92947616	3			AC131214	92803456		55447	0	1571	57018
S/G/Y/R/B/O	NT_022475	AC019233	93027672	3	chr3	NT_022475	AC108710	93289538	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC019233	93027672	3			AC068019	92803456		43832	0	0	43832
S/G/Y/R/B/O	NT_022475	AC019233	93027672	3			AC131214	92947616		20736	0	24422	45158
S/G/Y/R/B/O	NT_022475	AC108710	93289538	3	chr3	NT_022475	AC024218	93426340	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC108710	93289538	3			AC024890	92947616		172019	0	0	172019
S/G/Y/R/B/O	NT_022475	AC108710	93289538	3			AC068019	92947616		99481	0	0	99481
S/G/Y/R/B/O	NT_022475	AC024218	93426340	3	chr3	NT_022475	AC016955	93566196	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC016955	93566196	3	chr3	NT_022475	AC117427	93733534	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022475	AC117427	93733534	3	chr3	NT_022475	AC108698	93815072	3	0	2001	0	2001
S/G/Y/R/B/O	NT_022475	AC108698	93815072	3	chr3	NT_022475	AC015895	93886548	1	73187	0	545	73732
S/G/Y/R/B/O	NT_022475	AC108698	93815072	3	chr3	NT_022475	AC011281	93951722	1	27663	0	14002	41665
S/G/Y/R/B/O	NT_022475	AC015895	93886548	1	chr3	NT_022475	AC011281	93951722	1	31426	0	10856	42282
S/G/Y/R/B/O	NT_022475	AC011281	93951722	1	chr3	NT_022475	AC108715	94017899	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC011281	93951722	1	chr3	NT_022475	AC108698	93815072	3	27663	0	14002	41665
S/G/Y/R/B/O	NT_022475	AC108715	94017899	3	chr3	NT_022475	AC108695	94194361	3	119324	0	0	119324
S/G/Y/R/B/O	NT_022475	AC108715	94017899	3			AC027476	93886548		71283	3699	65545	140527
S/G/Y/R/B/O	NT_022475	AC108715	94017899	3			AC068392	93886548		26114	2977	18714	47805
S/G/Y/R/B/O	NT_022475	AC108695	94194361	3	chr3	NT_022475	AC067740	94265882	3	2007	0	0	2007
S/G/Y/R/B/O	NT_022475	AC108695	94194361	3			AC027476	94194361		78214	4136	10598	92948
S/G/Y/R/B/O	NT_022475	AC108695	94194361	3			AC068392	94265882		70790	9310	23216	103316
S/G/Y/R/B/O	NT_022475	AC067740	94265882	3	chr3	NT_022475	AC107614	94313871	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC107614	94313871	3	chr3	NT_022475	AC109781	94471564	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC107614	94313871	3			AC068415	94194361		54463	2855	8765	66083
S/G/Y/R/B/O	NT_022475	AC109781	94471564	3	chr3	NT_022475	AC131151	94587189	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022475	AC109781	94471564	3			AC068415	94194361		20339	0	0	20339
S/G/Y/R/B/O	NT_022475	AC131151	94587189	3	chr3	NT_022475	AC134998	94697177	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC134998	94697177	3	chr3	NT_022475	AC046177	94815567	1	54826	0	3899	58725
S/G/Y/R/B/O	NT_022475	AC134998	94697177	3			AC107303	94815567		40959	0	19394	60353
S/G/Y/R/B/O	NT_022475	AC134998	94697177	3			AC107303	94815567		40959	0	19394	60353
S/G/Y/R/B/O	NT_022475	AC134998	94697177	3			AC136189	94815567		10763	7541	17135	35439
S/G/Y/R/B/O	NT_022475	AC134998	94697177	3			AC136189	94815567		10763	7541	17135	35439
S/G/Y/R/B/O	NT_022475	AC046177	94815567	1	chr3	NT_022475	AC106719	94842935	3	14331	2914	11686	28931
S/G/Y/R/B/O	NT_022475	AC046177	94815567	1			AC011575	94815567		14302	1843	8355	24500
S/G/Y/R/B/O	NT_022475	AC046177	94815567	1			AC107303	94842935		97329	3826	10691	111846
S/G/Y/R/B/O	NT_022475	AC046177	94815567	1			AC136189	94697177		20756	14498	16543	51797
S/G/Y/R/B/O	NT_022475	AC106719	94842935	3	chr3	NT_022475	AC117432	94997587	3	55064	0	0	55064
S/G/Y/R/B/O	NT_022475	AC106719	94842935	3			AC011575	94697177		87659	2680	30221	120560
S/G/Y/R/B/O	NT_022475	AC106719	94842935	3			AC136189	94997587		19902	11533	3319	34754
S/G/Y/R/B/O	NT_022475	AC117432	94997587	3	chr3	NT_022475	AC117433	95095147	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022475	AC117432	94997587	3			AC011575	94997587		29040	4175	2168	35383
S/G/Y/R/B/O	NT_022475	AC117433	95095147	3	chr3	NT_022475	AC108739	95157712	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC108739	95157712	3	chr3	NT_022475	AC107304	95249912	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022475	AC107304	95249912	3	chr3	NT_022475	AC108697	95429442	3	65715	0	0	65715
S/G/Y/R/B/O	NT_022475	AC107304	95249912	3			AC016851	95249912		38480	2288	5340	46108
S/G/Y/R/B/O	NT_022475	AC107304	95249912	3			AC060756	95249912		50723	3854	25644	80221
S/G/Y/R/B/O	NT_022475	AC108697	95429442	3	chr3	NT_022475	AC107015	95527464	3	79067	0	0	79067
S/G/Y/R/B/O	NT_022475	AC108697	95429442	3			AC016851	95157712		79187	6078	5340	90605
S/G/Y/R/B/O	NT_022475	AC108697	95429442	3			AC025020	95157712		36384	0	10932	47316
S/G/Y/R/B/O	NT_022475	AC107015	95527464	3	chr3	NT_022475	AC117444	95604496	3	0	1998	0	1998
S/G/Y/R/B/O	NT_022475	AC107015	95527464	3			AC016851	95249912		33570	1725	2060	37355
S/G/Y/R/B/O	NT_022475	AC107015	95527464	3			AC025020	95249912		52341	0	12333	64674
S/G/Y/R/B/O	NT_022475	AC117444	95604496	3	chr3	NT_022475	AC106717	95707346	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC117444	95604496	3			AC024033	95604496		11824	1574	0	13398
S/G/Y/R/B/O	NT_022475	AC117444	95604496	3			AC027752	95604496		24665	3593	1022	29280
S/G/Y/R/B/O	NT_022475	AC106717	95707346	3	chr3	NT_022475	AC109782	95731272	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC109782	95731272	3	chr3	NT_022475	AC108714	95894863	3	48105	0	0	48105
S/G/Y/R/B/O	NT_022475	AC109782	95731272	3			AC027752	95527464		28511	6646	7899	43056
S/G/Y/R/B/O	NT_022475	AC109782	95731272	3			AC074082	95527464		23368	0	0	23368
S/G/Y/R/B/O	NT_022475	AC108714	95894863	3	chr3	NT_022475	AC119745	95997901	3	0	0	1823	1823
S/G/Y/R/B/O	NT_022475	AC108714	95894863	3			AC074082	95894863		86247	0	21723	107970
S/G/Y/R/B/O	NT_022475	AC119745	95997901	3	chr3	NT_022475	AC134730	96070227	3	2102	0	0	2102
S/G/Y/R/B/O	NT_022475	AC134730	96070227	3	chr3	NT_022475	AC107482	96111797	3	2015	0	0	2015
S/G/Y/R/B/O	NT_022475	AC134730	96070227	3			U90093	95997901		14002	0	0	14002
S/G/Y/R/B/O	NT_022475	AC134730	96070227	3			U90093	95997901		14002	0	0	14002
S/G/Y/R/B/O	NT_022475	AC107482	96111797	3	chr3	NT_022475	AC110717	96292428	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022475	AC107482	96111797	3			AC026527	95997901		119696	8204	17465	145365
S/G/Y/R/B/O	NT_022475	AC110717	96292428	3	chr3	NT_022475	AC117470	96344948	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022475	AC117470	96344948	3	chr3	NT_022475	AC130510	96535578	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022475	AC117470	96344948	3			AC021156	96344948		127283	6370	1958	135611
S/G/Y/R/B/O	NT_022475	AC130510	96535578	3	chr3	NT_022475	AC117439	96595978	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022475	AC130510	96535578	3			AC117408	96535578		62364	0	0	62364
S/G/Y/R/B/O	NT_022475	AC117439	96595978	3	chr3	NT_022475	AC135369	96764645	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022475	AC117439	96595978	3			AC023837	96344948		24145	0	25298	49443
S/G/Y/R/B/O	NT_022475	AC117439	96595978	3			AC117408	96344948		37302	0	15824	53126
S/G/Y/R/B/O	NT_022475	AC135369	96764645	3	chr3	NT_022475	AC110491	96777390	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022475	AC110491	96777390	3	chr3	NT_022475	AC026100	96967361	3	97543	0	0	97543
S/G/Y/R/B/O	NT_022475	AC110491	96777390	3			AC027530	96967361		174942	4135	0	179077
S/G/Y/R/B/O	NT_022475	AC026100	96967361	3	chr3	NT_022475	AC024892	97079262	3	0	1994	0	1994
S/G/Y/R/B/O	NT_022475	AC026100	96967361	3			AC027530	97079262		96187	0	0	96187
S/G/Y/R/B/O	NT_022475	AC024892	97079262	3	chr3	NT_022475	AC117460	97108921	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC117460	97108921	3	chr3	NT_022475	AC117473	97292516	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC117473	97292516	3	chr3	NT_022475	AC108730	97376145	3	0	1998	0	1998
S/G/Y/R/B/O	NT_022475	AC108730	97376145	3	chr3	NT_022475	AC074274	97459379	3	0	1995	0	1995
S/G/Y/R/B/O	NT_022475	AC074274	97459379	3	chr3	NT_022475	AC021660	97501914	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC021660	97501914	3	chr3	NT_022475	AC108737	97664475	3	0	0	0	0
S/G/Y/R/B/O	NT_022475	AC108737	97664475	3	chr3	NT_022475	AC016962	97679145	3	0	2022	0	2022
S/G/Y/R/B/O	NT_022475	AC016962	97679145	3	chr3	NT_022475	AC106728	97726669	3	0	2004	0	2004
S/G/Y/R/B/O	NT_022475	AC106728	97726669	3	chr3	NT_022475	AC091213	97918288	1	6458	0	0	6458
S/G/Y/R/B/O	NT_022475	AC106728	97726669	3			AC013497	97664475		81284	9931	51635	142850
S/G/Y/R/B/O	NT_022475	AC091213	97918288	1	chr3	NT_022475	AC106704	97949314	3	26022	0	0	26022
S/G/Y/R/B/O	NT_022475	AC091213	97918288	1	chr3	NT_022475	AC091212	97986602	3	31293	0	0	31293
S/G/Y/R/B/O	NT_022475	AC091213	97918288	1			AC022838	97918288		36475	629	1289	38393
S/G/Y/R/B/O	NT_022475	AC106704	97949314	3	chr3	NT_022475	AC091212	97986602	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022475	AC106704	97949314	3			AC022838	97726669		11655	0	0	11655
S/G/Y/R/B/O	NT_022475	AC091212	97986602	3
S/G/Y/R/B/O	NT_022475	AC091212	97986602	3	chr3	NT_022475	AC091213	97918288	1	31293	0	0	31293
S/G/Y/R/B/O	NT_022475	AC091212	97986602	3			AC022838	97918288		45380	1659	14239	61278

NT_033050

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_033050	AC108678	98075602	3	chr3	NT_033050	AC092181	98096957	3	0	0	0	0
S/G/Y/R/B/O	NT_033050	AC092181	98096957	3	chr3	NT_033050	AC068767	98278128	3	0	0	0	0
S/G/Y/R/B/O	NT_033050	AC092181	98096957	3			AC068639	97949314		49269	10022	13064	72355
S/G/Y/R/B/O	NT_033050	AC092181	98096957	3			AC069411	97949314		100586	0	0	100586
S/G/Y/R/B/O	NT_033050	AC068767	98278128	3	chr3	NT_033050	AC107297	98289232	3	0	0	0	0
S/G/Y/R/B/O	NT_033050	AC107297	98289232	3	chr3	NT_033050	AC078828	98342086	3	2000	0	0	2000
S/G/Y/R/B/O	NT_033050	AC107297	98289232	3			AC091156	98342086		30677	0	0	30677
S/G/Y/R/B/O	NT_033050	AC078828	98342086	3	chr3	NT_033050	AC107029	98512128	3	76021	0	0	76021
S/G/Y/R/B/O	NT_033050	AC078828	98342086	3			AC022829	98342086		79984	3353	1133	84470
S/G/Y/R/B/O	NT_033050	AC078828	98342086	3			AC055744	98342086		44255	0	0	44255
S/G/Y/R/B/O	NT_033050	AC078828	98342086	3			AC055783	98342086		53504	4426	0	57930
S/G/Y/R/B/O	NT_033050	AC078828	98342086	3			AC091156	98342086		38870	0	2644	41514
S/G/Y/R/B/O	NT_033050	AC107029	98512128	3	chr3	NT_033050	AC055723	98618608	3	34578	0	0	34578
S/G/Y/R/B/O	NT_033050	AC107029	98512128	3			AC055744	98618608		127036	0	0	127036
S/G/Y/R/B/O	NT_033050	AC107029	98512128	3			AC055783	98618608		107026	4436	0	111462
S/G/Y/R/B/O	NT_033050	AC107029	98512128	3			AC069048	98618608		27330	1811	0	29141
S/G/Y/R/B/O	NT_033050	AC107029	98512128	3			AC092912	98342086		25088	0	895	25983
S/G/Y/R/B/O	NT_033050	AC055723	98618608	3	chr3	NT_033050	AC069222	98750775	3	0	1920	0	1920
S/G/Y/R/B/O	NT_033050	AC055723	98618608	3			AC055744	98342086		27637	0	0	27637
S/G/Y/R/B/O	NT_033050	AC055723	98618608	3			AC069048	98342086		141923	7645	1367	150935
S/G/Y/R/B/O	NT_033050	AC055723	98618608	3			AC092912	98750775		115468	3517	0	118985
S/G/Y/R/B/O	NT_033050	AC055723	98618608	3			AC120598	98512128		52796	17456	7363	77615
S/G/Y/R/B/O	NT_033050	AC069222	98750775	3	chr3	NT_033050	AC024938	98865855	3	0	1988	0	1988
S/G/Y/R/B/O	NT_033050	AC069222	98750775	3			AC022883	98512128		87300	7857	6053	101210
S/G/Y/R/B/O	NT_033050	AC069222	98750775	3			AC069048	98618608		18097	0	0	18097
S/G/Y/R/B/O	NT_033050	AC069222	98750775	3			AC092912	98618608		13139	0	4867	18006
S/G/Y/R/B/O	NT_033050	AC069222	98750775	3			AC120598	98618608		17287	20655	2127	40069
S/G/Y/R/B/O	NT_033050	AC024938	98865855	3	chr3	NT_033050	AC117419	98927199	3	2004	0	0	2004
S/G/Y/R/B/O	NT_033050	AC024938	98865855	3			AC022883	98618608		50474	5892	0	56366
S/G/Y/R/B/O	NT_033050	AC117419	98927199	3	chr3	NT_033050	AC130887	98988226	3	2000	0	0	2000
S/G/Y/R/B/O	NT_033050	AC130887	98988226	3	chr3	NT_033050	AC129803	99093118	3	0	0	0	0
S/G/Y/R/B/O	NT_033050	AC130887	98988226	3			AC024413	98988226		54411	2591	3344	60346
S/G/Y/R/B/O	NT_033050	AC130887	98988226	3			AC024433	98988226		40579	15799	3449	59827
S/G/Y/R/B/O	NT_033050	AC130887	98988226	3			AC106711	98988226		20119	2595	24289	47003
S/G/Y/R/B/O	NT_033050	AC129803	99093118	3	chr3	NT_033050	AC078783	99245428	3	2002	0	0	2002
S/G/Y/R/B/O	NT_033050	AC129803	99093118	3			AC023782	98927199		14655	9952	19228	43835
S/G/Y/R/B/O	NT_033050	AC129803	99093118	3			AC024413	98927199		84809	10681	12528	108018
S/G/Y/R/B/O	NT_033050	AC129803	99093118	3			AC024433	98927199		59439	8460	23151	91050
S/G/Y/R/B/O	NT_033050	AC129803	99093118	3			AC106711	99245428		82713	0	19903	102616
S/G/Y/R/B/O	NT_033050	AC078783	99245428	3	chr3	NT_033050	AC093003	99277192	3	2003	0	0	2003
S/G/Y/R/B/O	NT_033050	AC078783	99245428	3			AC023782	99428968		14539	3604	8905	27048
S/G/Y/R/B/O	NT_033050	AC093003	99277192	3	chr3	NT_033050	AC015462	99428968	1	64528	0	0	64528
S/G/Y/R/B/O	NT_033050	AC093003	99277192	3			AC023782	99428968		60121	12749	21625	94495
S/G/Y/R/B/O	NT_033050	AC015462	99428968	1
S/G/Y/R/B/O	NT_033050	AC015462	99428968	1			AC023782	99245428		55900	12758	25833	94491

NT_033041

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_033041	AC128693	99451327	3	chr3	NT_033041	AC069223	99594944	3	0	1992	0	1992
S/G/Y/R/B/O	NT_033041	AC069223	99594944	3	chr3	NT_033041	AC068763	99772716	3	0	0	0	0
S/G/Y/R/B/O	NT_033041	AC069223	99594944	3			AC022912	99594944		76628	2279	31873	110780
S/G/Y/R/B/O	NT_033041	AC069223	99594944	3			AC027080	99594944		67240	1810	0	69050
S/G/Y/R/B/O	NT_033041	AC069223	99594944	3			AC093623	99594944		58458	0	0	58458
S/G/Y/R/B/O	NT_033041	AC069223	99594944	3			AC130437	99451327		80205	0	41356	121561
S/G/Y/R/B/O	NT_033041	AC068763	99772716	3	chr3	NT_033041	AC093009	99784913	3	2005	0	0	2005
S/G/Y/R/B/O	NT_033041	AC068763	99772716	3			AC022912	99451327		71225	1526	50998	123749
S/G/Y/R/B/O	NT_033041	AC068763	99772716	3			AC027080	99451327		65131	1844	14034	81009
S/G/Y/R/B/O	NT_033041	AC068763	99772716	3			AC093623	99784913		70652	0	0	70652
S/G/Y/R/B/O	NT_033041	AC068763	99772716	3			AC130437	99784913		92480	0	41384	133864
S/G/Y/R/B/O	NT_033041	AC093009	99784913	3	chr3	NT_033041	AC106721	99872122	3	77551	0	0	77551
S/G/Y/R/B/O	NT_033041	AC093009	99784913	3			AC012280	99784913		57733	0	17458	75191
S/G/Y/R/B/O	NT_033041	AC093009	99784913	3			AC022912	99784913		11667	0	0	11667
S/G/Y/R/B/O	NT_033041	AC093009	99784913	3			AC027080	99784913		83733	1687	0	85420
S/G/Y/R/B/O	NT_033041	AC093009	99784913	3			AC093623	99772716		34542	0	0	34542
S/G/Y/R/B/O	NT_033041	AC093009	99784913	3			AC130437	99872122		11660	0	0	11660
S/G/Y/R/B/O	NT_033041	AC106721	99872122	3	chr3	NT_033041	AC080014	99900817	3	0	1990	0	1990
S/G/Y/R/B/O	NT_033041	AC106721	99872122	3			AC012280	99872122		70474	701	32341	103516
S/G/Y/R/B/O	NT_033041	AC106721	99872122	3			AC027080	99872122		72117	1687	0	73804
S/G/Y/R/B/O	NT_033041	AC106721	99872122	3			AC093623	99784913		22887	0	0	22887
S/G/Y/R/B/O	NT_033041	AC080014	99900817	3
S/G/Y/R/B/O	NT_033041	AC080014	99900817	3			AC012280	99784913		71191	1992	9723	82906

NT_037574

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037574	AC018352	100071928	3
S/G/Y/R/B/O	NT_037574	AC018352	100071928	3			AC018353	99872122		37028	0	16339	53367

NT_005863

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005863	AC093008	100235280	3	chr3	NT_005863	AC068764	100359910	3	0	0	0	0
S/G/Y/R/B/O	NT_005863	AC093008	100235280	3			AC023311	99872122		75831	2856	25275	103962
S/G/Y/R/B/O	NT_005863	AC093008	100235280	3			AC027757	99872122		73984	40217	13426	127627
S/G/Y/R/B/O	NT_005863	AC093008	100235280	3			AC130436	99872122		58439	0	46769	105208
S/G/Y/R/B/O	NT_005863	AC068764	100359910	3	chr3	NT_005863	AC110994	100543875	1	84839	0	0	84839
S/G/Y/R/B/O	NT_005863	AC068764	100359910	3			AC009581	99872122		55529	0	22943	78472
S/G/Y/R/B/O	NT_005863	AC068764	100359910	3			AC023311	99872122		93729	5082	7619	106430
S/G/Y/R/B/O	NT_005863	AC068764	100359910	3			AC027757	99872122		17030	14585	0	31615
S/G/Y/R/B/O	NT_005863	AC068764	100359910	3			AC130436	100543875		15670	0	89437	105107
S/G/Y/R/B/O	NT_005863	AC110994	100543875	1	chr3	NT_005863	AC073861	100607369	3	44791	0	0	44791
S/G/Y/R/B/O	NT_005863	AC110994	100543875	1			AC009581	100543875		23709	0	43184	66893
S/G/Y/R/B/O	NT_005863	AC110994	100543875	1			AC023311	100543875		29784	2227	3305	35316
S/G/Y/R/B/O	NT_005863	AC110994	100543875	1			AC130436	100607369		25797	0	8912	34709
S/G/Y/R/B/O	NT_005863	AC073861	100607369	3	chr3	NT_005863	AC084198	100747692	3	0	0	1782	1782
S/G/Y/R/B/O	NT_005863	AC084198	100747692	3	chr3	NT_005863	AC020651	100940643	3	0	0	0	0
S/G/Y/R/B/O	NT_005863	AC084198	100747692	3			AC009761	100543875		50187	3647	27785	81619
S/G/Y/R/B/O	NT_005863	AC084198	100747692	3			AC021467	100543875		20003	2815	3104	25922
S/G/Y/R/B/O	NT_005863	AC084198	100747692	3			AC023071	100543875		10931	2912	4437	18280
S/G/Y/R/B/O	NT_005863	AC020651	100940643	3	chr3	NT_005863	AC106712	101091288	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005863	AC020651	100940643	3			AC021467	100607369		73063	5187	2824	81074
S/G/Y/R/B/O	NT_005863	AC020651	100940643	3			AC023071	100607369		73302	4380	5692	83374
S/G/Y/R/B/O	NT_005863	AC020651	100940643	3			AC055706	100607369		38080	0	40149	78229
S/G/Y/R/B/O	NT_005863	AC106712	101091288	3	chr3	NT_005863	AC112135	101149950	3	0	0	0	0
S/G/Y/R/B/O	NT_005863	AC106712	101091288	3			AC055706	100940643		103227	0	0	103227
S/G/Y/R/B/O	NT_005863	AC106712	101091288	3			AC060762	100940643		98562	9507	3786	111855
S/G/Y/R/B/O	NT_005863	AC106712	101091288	3			AC068238	100940643		74261	10295	0	84556
S/G/Y/R/B/O	NT_005863	AC112135	101149950	3	chr3	NT_005863	AC022324	101325332	3	51817	0	0	51817
S/G/Y/R/B/O	NT_005863	AC112135	101149950	3			AC060762	101325332		46953	5456	2769	55178
S/G/Y/R/B/O	NT_005863	AC112135	101149950	3			AC068238	101325332		132915	8447	0	141362
S/G/Y/R/B/O	NT_005863	AC022324	101325332	3	chr3	NT_005863	AC117438	101461717	3	0	0	0	0
S/G/Y/R/B/O	NT_005863	AC022324	101325332	3			AC068238	101325332		33530	0	0	33530
S/G/Y/R/B/O	NT_005863	AC117438	101461717	3	chr3	NT_005863	AC109778	101472557	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005863	AC109778	101472557	3	chr3	NT_005863	AC069529	101539886	3	2006	0	0	2006
S/G/Y/R/B/O	NT_005863	AC109778	101472557	3			AC011950	101472557		66465	1990	0	68455
S/G/Y/R/B/O	NT_005863	AC069529	101539886	3	chr3	NT_005863	AC063938	101711082	3	0	0	0	0
S/G/Y/R/B/O	NT_005863	AC069529	101539886	3			AC011950	101461717		76504	2778	0	79282
S/G/Y/R/B/O	NT_005863	AC069529	101539886	3			AC027527	101461717		50221	5043	0	55264
S/G/Y/R/B/O	NT_005863	AC069529	101539886	3			AC092901	101461717		35731	5156	0	40887
S/G/Y/R/B/O	NT_005863	AC063938	101711082	3
S/G/Y/R/B/O	NT_005863	AC063938	101711082	3			AC027527	101472557		64850	1795	12497	79142
S/G/Y/R/B/O	NT_005863	AC063938	101711082	3			AC068639	101472557		84041	0	0	84041
S/G/Y/R/B/O	NT_005863	AC063938	101711082	3			AC092901	101472557		49738	2219	27021	78978

NT_022454

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022454	AC108748	101813321	3	chr3	NT_022454	AC092899	101872279	3	2034	0	0	2034
S/G/Y/R/B/O	NT_022454	AC108748	101813321	3			AC027527	101472557		17562	4257	1435	23254
S/G/Y/R/B/O	NT_022454	AC108748	101813321	3			AC068639	101472557		58884	0	0	58884
S/G/Y/R/B/O	NT_022454	AC108748	101813321	3			AC092901	101872279		17206	0	0	17206
S/G/Y/R/B/O	NT_022454	AC092899	101872279	3	chr3	NT_022454	AC046142	101914495	3	0	1996	0	1996
S/G/Y/R/B/O	NT_022454	AC092899	101872279	3			AC026019	101872279		22421	0	0	22421
S/G/Y/R/B/O	NT_022454	AC046142	101914495	3	chr3	NT_022454	AC130408	102100422	3	2388	0	0	2388
S/G/Y/R/B/O	NT_022454	AC046142	101914495	3			AC013645	101813321		90346	472	0	90818
S/G/Y/R/B/O	NT_022454	AC046142	101914495	3			AC025780	101813321		19471	0	0	19471
S/G/Y/R/B/O	NT_022454	AC046142	101914495	3			AC026019	101813321		44809	1456	34666	80931
S/G/Y/R/B/O	NT_022454	AC046142	101914495	3			AC117407	101872279		27978	0	1944	29922
S/G/Y/R/B/O	NT_022454	AC130408	102100422	3	chr3	NT_022454	AC079901	102128858	3	0	0	0	0
S/G/Y/R/B/O	NT_022454	AC130408	102100422	3			AC025780	102100422		25803	0	0	25803
S/G/Y/R/B/O	NT_022454	AC079901	102128858	3	chr3	NT_022454	AC021064	102188156	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022454	AC079901	102128858	3			AC013645	101914495		13159	0	0	13159
S/G/Y/R/B/O	NT_022454	AC079901	102128858	3			AC025780	102188156		29037	0	0	29037
S/G/Y/R/B/O	NT_022454	AC079901	102128858	3			AC117407	102188156		12856	0	0	12856
S/G/Y/R/B/O	NT_022454	AC021064	102188156	3	chr3	NT_022454	AC117484	102349051	3	0	1017	0	1017
S/G/Y/R/B/O	NT_022454	AC021064	102188156	3			AC063941	102188156		53319	2271	50842	106432
S/G/Y/R/B/O	NT_022454	AC117484	102349051	3	chr3	NT_022454	AC025028	102365034	3	0	1171	0	1171
S/G/Y/R/B/O	NT_022454	AC025028	102365034	3	chr3	NT_022454	AC117441	102509832	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022454	AC117441	102509832	3	chr3	NT_022454	AC093002	102602720	3	0	1979	0	1979
S/G/Y/R/B/O	NT_022454	AC093002	102602720	3	chr3	NT_022454	AC046144	102671431	3	0	1994	0	1994
S/G/Y/R/B/O	NT_022454	AC046144	102671431	3	chr3	NT_022454	AC104670	102858277	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022454	AC046144	102671431	3			AC067934	102509832		31493	0	16466	47959
S/G/Y/R/B/O	NT_022454	AC104670	102858277	3	chr3	NT_022454	AC125493	102943517	3	0	1979	0	1979
S/G/Y/R/B/O	NT_022454	AC104670	102858277	3			AC021109	102858277		44876	0	14579	59455
S/G/Y/R/B/O	NT_022454	AC104670	102858277	3			AC067934	102671431		72516	4106	1334	77956
S/G/Y/R/B/O	NT_022454	AC125493	102943517	3	chr3	NT_022454	AC078952	102950839	3	0	2119	0	2119
S/G/Y/R/B/O	NT_022454	AC078952	102950839	3
S/G/Y/R/B/O	NT_022454	AC078952	102950839	3			AC021109	102858277		32424	8649	15980	57053

NT_037575

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037575	AC134999	103127823	1
S/G/Y/R/B/O	NT_037575	AC134999	103127823	1	chr5	NT_006431	AC113166	64148197	3	18288	9761	10685	38734

NT_025670

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_025670	AC016970	103205733	3	chr3	NT_025670	AC078811	103372699	3	0	1999	0	1999
S/G/Y/R/B/O	NT_025670	AC078811	103372699	3	chr3	NT_025670	AC108677	103443220	3	0	1998	0	1998
S/G/Y/R/B/O	NT_025670	AC078811	103372699	3			AC012275	103372699		11889	0	0	11889
S/G/Y/R/B/O	NT_025670	AC108677	103443220	3	chr3	NT_025670	AC080009	103548872	3	0	0	0	0
S/G/Y/R/B/O	NT_025670	AC108677	103443220	3			AC012275	103443220		34031	0	9132	43163
S/G/Y/R/B/O	NT_025670	AC080009	103548872	3	chr3	NT_025670	AC091804	103710337	3	0	1993	0	1993
S/G/Y/R/B/O	NT_025670	AC091804	103710337	3	chr3	NT_025670	AC091780	103811345	1	17955	0	11722	29677
S/G/Y/R/B/O	NT_025670	AC091804	103710337	3			AC063930	103710337		22785	4473	16085	43343
S/G/Y/R/B/O	NT_025670	AC091780	103811345	1	chr3	NT_025670	AC021056	103848382	3	11280	0	0	11280
S/G/Y/R/B/O	NT_025670	AC091780	103811345	1			AC063930	103848382		11572	2490	15203	29265
S/G/Y/R/B/O	NT_025670	AC021056	103848382	3	chr3	NT_025670	AC069070	103859662	3	2003	0	0	2003
S/G/Y/R/B/O	NT_025670	AC021056	103848382	3			AC024147	103710337		11273	0	0	11273
S/G/Y/R/B/O	NT_025670	AC069070	103859662	3	chr3	NT_025670	AC012154	104012486	3	0	1997	0	1997
S/G/Y/R/B/O	NT_025670	AC069070	103859662	3			AC024147	103848382		67005	0	33697	100702
S/G/Y/R/B/O	NT_025670	AC012154	104012486	3	chr3	NT_025670	AC092904	104204307	3	0	0	0	0
S/G/Y/R/B/O	NT_025670	AC012154	104012486	3	chr15	NT_026446	AC020639	18535614	1	14865	3249	3385	21499
S/G/Y/R/B/O	NT_025670	AC092904	104204307	3	chr3	NT_025670	AC092913	104330948	3	2001	0	0	2001
S/G/Y/R/B/O	NT_025670	AC092904	104204307	3			AC026958	103859662		23891	0	72842	96733
S/G/Y/R/B/O	NT_025670	AC092904	104204307	3			AC026967	103859662		11388	7821	1697	20906
S/G/Y/R/B/O	NT_025670	AC092913	104330948	3	chr3	NT_025670	AC068762	104368271	3	0	2004	0	2004
S/G/Y/R/B/O	NT_025670	AC068762	104368271	3	chr3	NT_025670	AC078806	104520812	3	0	1999	0	1999
S/G/Y/R/B/O	NT_025670	AC068762	104368271	3			AC026967	104204307		78131	18348	11417	107896
S/G/Y/R/B/O	NT_025670	AC068762	104368271	3			AC073356	104204307		39866	0	85812	125678
S/G/Y/R/B/O	NT_025670	AC078806	104520812	3	chr3	NT_025670	AC133476	104659866	3	2000	0	0	2000
S/G/Y/R/B/O	NT_025670	AC078806	104520812	3			AC012584	104330948		78184	0	23894	102078
S/G/Y/R/B/O	NT_025670	AC078806	104520812	3			AC130411	104368271		54702	0	838	55540
S/G/Y/R/B/O	NT_025670	AC133476	104659866	3	chr3	NT_025670	AC023602	104723253	3	2001	0	0	2001
S/G/Y/R/B/O	NT_025670	AC133476	104659866	3			AC012584	104659866		49127	0	0	49127
S/G/Y/R/B/O	NT_025670	AC133476	104659866	3			AC130411	104520812		49121	0	0	49121
S/G/Y/R/B/O	NT_025670	AC023602	104723253	3	chr3	NT_025670	AC016138	104820212	3	0	0	252	252
S/G/Y/R/B/O	NT_025670	AC023602	104723253	3			AC069225	104820212		22191	0	28529	50720
S/G/Y/R/B/O	NT_025670	AC016138	104820212	3	chr3	NT_025670	AC126185	104999640	1	69875	0	0	69875
S/G/Y/R/B/O	NT_025670	AC016138	104820212	3			AC015788	104659866		69864	0	0	69864
S/G/Y/R/B/O	NT_025670	AC016138	104820212	3			AC069225	104723253		111484	0	0	111484
S/G/Y/R/B/O	NT_025670	AC126185	104999640	1	chr3	NT_025670	AC112485	105077399	3	22582	0	0	22582
S/G/Y/R/B/O	NT_025670	AC126185	104999640	1			AC015788	104999640		169308	0	0	169308
S/G/Y/R/B/O	NT_025670	AC126185	104999640	1			AC027095	104820212		13432	2485	0	15917
S/G/Y/R/B/O	NT_025670	AC112485	105077399	3	chr3	NT_025670	AC091157	105245899	3	0	1844	0	1844
S/G/Y/R/B/O	NT_025670	AC112485	105077399	3			AC015788	105077399		22580	0	0	22580
S/G/Y/R/B/O	NT_025670	AC112485	105077399	3			AC027095	105077399		81119	15583	14001	110703
S/G/Y/R/B/O	NT_025670	AC091157	105245899	3	chr3	NT_025670	AC092906	105344049	3	2004	0	0	2004
S/G/Y/R/B/O	NT_025670	AC092906	105344049	3	chr3	NT_025670	AC131237	105418502	3	2000	0	0	2000
S/G/Y/R/B/O	NT_025670	AC092906	105344049	3			AC016379	105077399		43374	6069	4096	53539
S/G/Y/R/B/O	NT_025670	AC092906	105344049	3			AC078979	105077399		43790	0	0	43790
S/G/Y/R/B/O	NT_025670	AC131237	105418502	3	chr3	NT_025670	AC079382	105485811	3	2001	0	0	2001
S/G/Y/R/B/O	NT_025670	AC131237	105418502	3			AC016379	105418502		26705	13892	4125	44722
S/G/Y/R/B/O	NT_025670	AC131237	105418502	3			AC078979	105418502		21377	0	0	21377
S/G/Y/R/B/O	NT_025670	AC079382	105485811	3	chr3	NT_025670	AC110489	105651437	3	0	1994	0	1994
S/G/Y/R/B/O	NT_025670	AC110489	105651437	3	chr3	NT_025670	AC112127	105666664	3	2003	0	0	2003
S/G/Y/R/B/O	NT_025670	AC112127	105666664	3	chr3	NT_025670	AC079946	105704604	3	0	1994	0	1994
S/G/Y/R/B/O	NT_025670	AC079946	105704604	3	chr3	NT_025670	AC080097	105903397	3	0	0	0	0
S/G/Y/R/B/O	NT_025670	AC079946	105704604	3			AC016378	105651437		16809	0	57030	73839
S/G/Y/R/B/O	NT_025670	AC080097	105903397	3	chr3	NT_025670	AC068776	105994686	3	31027	0	0	31027
S/G/Y/R/B/O	NT_025670	AC068776	105994686	3	chr3	NT_025670	AC112650	106126105	3	0	0	1250	1250
S/G/Y/R/B/O	NT_025670	AC068776	105994686	3			AC068010	106232550		32907	2517	9659	45083
S/G/Y/R/B/O	NT_025670	AC112650	106126105	3	chr3	NT_025670	AC063927	106232550	3	108174	0	0	108174
S/G/Y/R/B/O	NT_025670	AC112650	106126105	3			AC068010	106232550		60929	13925	13217	88071
S/G/Y/R/B/O	NT_025670	AC063927	106232550	3
S/G/Y/R/B/O	NT_025670	AC063927	106232550	3			AC068010	105994686		56923	13920	12986	83829

NT_022434

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022434	AC117435	106263796	3	chr3	NT_022434	AC074043	106320066	3	0	0	1805	1805
S/G/Y/R/B/O	NT_022434	AC074043	106320066	3	chr3	NT_022434	AC063944	106508360	3	0	2015	0	2015
S/G/Y/R/B/O	NT_022434	AC074043	106320066	3			AC009651	106320066		34405	0	0	34405
S/G/Y/R/B/O	NT_022434	AC074043	106320066	3			AC092267	106508360		68722	0	0	68722
S/G/Y/R/B/O	NT_022434	AC063944	106508360	3	chr3	NT_022434	AC068765	106688749	3	0	0	1679	1679
S/G/Y/R/B/O	NT_022434	AC063944	106508360	3			AC009651	106263796		44556	0	12985	57541
S/G/Y/R/B/O	NT_022434	AC063944	106508360	3			AC067831	106263796		38006	3996	55438	97440
S/G/Y/R/B/O	NT_022434	AC063944	106508360	3			AC107022	106320066		116377	0	0	116377
S/G/Y/R/B/O	NT_022434	AC068765	106688749	3	chr3	NT_022434	AC072044	106838205	3	0	0	207	207
S/G/Y/R/B/O	NT_022434	AC068765	106688749	3			AC009893	106320066		99704	0	0	99704
S/G/Y/R/B/O	NT_022434	AC068765	106688749	3			AC026876	106320066		38226	2543	21506	62275
S/G/Y/R/B/O	NT_022434	AC068765	106688749	3			AC067831	106508360		16953	0	0	16953
S/G/Y/R/B/O	NT_022434	AC068765	106688749	3			AC078987	106838205		101333	0	14548	115881
S/G/Y/R/B/O	NT_022434	AC072044	106838205	3	chr3	NT_022434	AC107299	107016450	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022434	AC072044	106838205	3			AC009893	106838205		84822	1104	0	85926
S/G/Y/R/B/O	NT_022434	AC072044	106838205	3			AC025415	106838205		108501	0	2737	111238
S/G/Y/R/B/O	NT_022434	AC072044	106838205	3			AC026876	106838205		21160	4806	27331	53297
S/G/Y/R/B/O	NT_022434	AC107299	107016450	3	chr3	NT_022434	AC117477	107084892	3	69107	0	0	69107
S/G/Y/R/B/O	NT_022434	AC107299	107016450	3			AC025415	107084892		43601	2431	8546	54578
S/G/Y/R/B/O	NT_022434	AC117477	107084892	3	chr3	NT_022434	AC027296	107133920	3	0	0	0	0
S/G/Y/R/B/O	NT_022434	AC117477	107084892	3			AC011318	107084892		22315	0	0	22315
S/G/Y/R/B/O	NT_022434	AC117477	107084892	3			AC025415	107084892		50016	2431	955	53402
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3	chr3	NT_022434	AC012020	107257145	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC011318	107016450		75869	0	49731	125600
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC011318	107016450		75869	0	49731	125600
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC012340	107257145		122853	0	0	122853
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC012340	107257145		122853	0	0	122853
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC092450	107257145		11082	4577	9860	25519
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC092450	107257145		11082	4577	9860	25519
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC107424	107257145		127229	0	0	127229
S/G/Y/R/B/O	NT_022434	AC027296	107133920	3			AC107424	107257145		127229	0	0	127229
S/G/Y/R/B/O	NT_022434	AC012020	107257145	3	chr3	NT_022434	AC133475	107434980	3	0	0	1751	1751
S/G/Y/R/B/O	NT_022434	AC012020	107257145	3			AC011318	107257145		12543	0	27398	39941
S/G/Y/R/B/O	NT_022434	AC012020	107257145	3			AC012340	107257145		46629	2032	0	48661
S/G/Y/R/B/O	NT_022434	AC012020	107257145	3			AC019003	107257145		72735	2647	4842	80224
S/G/Y/R/B/O	NT_022434	AC012020	107257145	3			AC019297	107257145		134070	2873	12672	149615
S/G/Y/R/B/O	NT_022434	AC012020	107257145	3			AC107424	107133920		49142	0	0	49142
S/G/Y/R/B/O	NT_022434	AC012020	107257145	3			AC130409	107133920		107162	0	41006	148168
S/G/Y/R/B/O	NT_022434	AC133475	107434980	3	chr3	NT_022434	AC078855	107434981	3	0	0	1830	1830
S/G/Y/R/B/O	NT_022434	AC078855	107434981	3	chr3	NT_022434	AC135308	107608830	3	0	0	1869	1869
S/G/Y/R/B/O	NT_022434	AC078855	107434981	3			AC019003	107434981		46482	0	0	46482
S/G/Y/R/B/O	NT_022434	AC078855	107434981	3			AC020731	107434981		44978	1482	36205	82665
S/G/Y/R/B/O	NT_022434	AC078855	107434981	3			AC092197	107434981		52742	0	37351	90093
S/G/Y/R/B/O	NT_022434	AC135308	107608830	3	chr3	NT_022434	AC069499	107625407	3	0	0	1824	1824
S/G/Y/R/B/O	NT_022434	AC069499	107625407	3	chr3	NT_022434	AC092693	107833349	3	2271	0	0	2271
S/G/Y/R/B/O	NT_022434	AC069499	107625407	3			AC019169	107434981		61795	2064	31190	95049
S/G/Y/R/B/O	NT_022434	AC069499	107625407	3			AC020731	107434981		58109	1888	0	59997
S/G/Y/R/B/O	NT_022434	AC092693	107833349	3	chr3	NT_022434	AC092185	107852077	3	0	1405	0	1405
S/G/Y/R/B/O	NT_022434	AC092693	107833349	3			AC019169	107608830		18314	2211	0	20525
S/G/Y/R/B/O	NT_022434	AC092185	107852077	3	chr3	NT_022434	AC016932	108016634	3	2075	0	0	2075
S/G/Y/R/B/O	NT_022434	AC092185	107852077	3			AC019169	108016634		28587	2449	9214	40250
S/G/Y/R/B/O	NT_022434	AC016932	108016634	3	chr3	NT_022434	AC080135	108103559	3	0	0	0	0
S/G/Y/R/B/O	NT_022434	AC080135	108103559	3	chr3	NT_022434	AC016948	108165168	3	2016	0	0	2016
S/G/Y/R/B/O	NT_022434	AC016948	108165168	3	chr3	NT_022434	AC112138	108317496	3	76712	0	0	76712
S/G/Y/R/B/O	NT_022434	AC112138	108317496	3	chr3	NT_022434	AC063923	108362646	3	11840	0	0	11840
S/G/Y/R/B/O	NT_022434	AC063923	108362646	3	chr3	NT_022434	AC076971	108516094	3	0	1922	0	1922
S/G/Y/R/B/O	NT_022434	AC076971	108516094	3	chr3	NT_022434	AC124945	108589401	3	0	0	0	0
S/G/Y/R/B/O	NT_022434	AC124945	108589401	3	chr3	NT_022434	AC092905	108638551	3	0	1992	0	1992
S/G/Y/R/B/O	NT_022434	AC124945	108589401	3	chr3	NT_022434	AC023130	108790415	1	35049	0	7864	42913
S/G/Y/R/B/O	NT_022434	AC092905	108638551	3	chr3	NT_022434	AC023130	108790415	1	18040	0	32310	50350
S/G/Y/R/B/O	NT_022434	AC023130	108790415	1
S/G/Y/R/B/O	NT_022434	AC023130	108790415	1	chr3	NT_022434	AC124945	108589401	3	35049	0	7864	42913

NT_005795

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005795	AC078858	108830688	3	chr3	NT_005795	AC078980	108926986	3	0	0	1761	1761
S/G/Y/R/B/O	NT_005795	AC078858	108830688	3			AC074248	108589401		72214	0	12340	84554
S/G/Y/R/B/O	NT_005795	AC078980	108926986	3	chr3	NT_005795	AC068781	109067102	3	0	0	0	0
S/G/Y/R/B/O	NT_005795	AC078980	108926986	3			AC067764	108926986		20128	0	14076	34204
S/G/Y/R/B/O	NT_005795	AC078980	108926986	3			AC074342	108926986		54984	0	0	54984
S/G/Y/R/B/O	NT_005795	AC068781	109067102	3	chr3	NT_005795	AC078918	109262994	3	0	0	207	207
S/G/Y/R/B/O	NT_005795	AC068781	109067102	3			AC067764	108830688		27999	4653	50524	83176
S/G/Y/R/B/O	NT_005795	AC068781	109067102	3			AC068365	108830688		16237	0	1242	17479
S/G/Y/R/B/O	NT_005795	AC078918	109262994	3	chr3	NT_005795	AC073360	109339075	3	0	2067	0	2067
S/G/Y/R/B/O	NT_005795	AC078918	109262994	3			AC068365	109262994		32370	10283	1090	43743
S/G/Y/R/B/O	NT_005795	AC078918	109262994	3			AC092895	109339075		42871	0	0	42871
S/G/Y/R/B/O	NT_005795	AC073360	109339075	3	chr3	NT_005795	AC117424	109384905	3	0	0	1688	1688
S/G/Y/R/B/O	NT_005795	AC073360	109339075	3			AC068365	109339075		41296	599	4394	46289
S/G/Y/R/B/O	NT_005795	AC117424	109384905	3	chr3	NT_005795	AC106716	109519336	3	86607	0	0	86607
S/G/Y/R/B/O	NT_005795	AC117424	109384905	3			AC021742	109384905		56932	0	0	56932
S/G/Y/R/B/O	NT_005795	AC117424	109384905	3			AC108694	109519336		35585	0	0	35585
S/G/Y/R/B/O	NT_005795	AC106716	109519336	3	chr3	NT_005795	AC117471	109585468	3	0	0	0	0
S/G/Y/R/B/O	NT_005795	AC106716	109519336	3			AC021742	109519336		75255	0	47381	122636
S/G/Y/R/B/O	NT_005795	AC117471	109585468	3	chr3	NT_005795	AC112506	109665535	3	0	1915	0	1915
S/G/Y/R/B/O	NT_005795	AC117471	109585468	3			AC079984	110849658		36174	2618	21824	60616
S/G/Y/R/B/O	NT_005795	AC112506	109665535	3	chr3	NT_005795	AC117430	109778899	3	0	2000	0	2000
S/G/Y/R/B/O	NT_005795	AC112506	109665535	3			AC079984	109665535		14320	0	11673	25993
S/G/Y/R/B/O	NT_005795	AC117430	109778899	3	chr3	NT_005795	AC119737	109931840	3	42765	0	0	42765
S/G/Y/R/B/O	NT_005795	AC117430	109778899	3			AC053487	109585468		154892	0	0	154892
S/G/Y/R/B/O	NT_005795	AC119737	109931840	3	chr3	NT_005795	AC092909	109984621	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005795	AC119737	109931840	3			AC053487	109931840		42762	0	0	42762
S/G/Y/R/B/O	NT_005795	AC092909	109984621	3	chr3	NT_005795	AC117402	110148210	3	0	1240	0	1240
S/G/Y/R/B/O	NT_005795	AC092909	109984621	3			AC021834	109778899		107150	0	1460	108610
S/G/Y/R/B/O	NT_005795	AC117402	110148210	3	chr3	NT_005795	AC133477	110311965	3	0	0	0	0
S/G/Y/R/B/O	NT_005795	AC117402	110148210	3			AC021882	109931840		62909	1530	26857	91296
S/G/Y/R/B/O	NT_005795	AC133477	110311965	3	chr3	NT_005795	AC133124	110410981	3	2043	0	0	2043
S/G/Y/R/B/O	NT_005795	AC133124	110410981	3	chr3	NT_005795	AC092907	110521025	1	0	0	0	0
S/G/Y/R/B/O	NT_005795	AC133124	110410981	3			AC090661	110410981		24579	0	0	24579
S/G/Y/R/B/O	NT_005795	AC133124	110410981	3			AC090661	110410981		24579	0	0	24579
S/G/Y/R/B/O	NT_005795	AC092907	110521025	1	chr3	NT_005795	AC074277	110574287	3	113714	0	0	113714
S/G/Y/R/B/O	NT_005795	AC092907	110521025	1			AC133436	110574287		54784	0	0	54784
S/G/Y/R/B/O	NT_005795	AC092907	110521025	1			AC133436	110574287		54784	0	0	54784
S/G/Y/R/B/O	NT_005795	AC074277	110574287	3	chr3	NT_005795	AC092916	110749351	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005795	AC074277	110574287	3			AC026009	110574287		12373	0	569	12942
S/G/Y/R/B/O	NT_005795	AC092916	110749351	3	chr3	NT_005795	AC055748	110879528	3	0	0	1862	1862
S/G/Y/R/B/O	NT_005795	AC092916	110749351	3			AC026009	110749351		76117	1545	0	77662
S/G/Y/R/B/O	NT_005795	AC055748	110879528	3	chr3	NT_005795	AC117509	111027425	3	0	1947	0	1947
S/G/Y/R/B/O	NT_005795	AC117509	111027425	3	chr3	NT_005795	AC060225	111136580	3	2090	0	0	2090
S/G/Y/R/B/O	NT_005795	AC117509	111027425	3			AC026354	111027425		10370	0	0	10370
S/G/Y/R/B/O	NT_005795	AC060225	111136580	3	chr3	NT_005795	AC024887	111309044	3	0	0	1893	1893
S/G/Y/R/B/O	NT_005795	AC060225	111136580	3			AC015778	111136580		82079	2225	0	84304
S/G/Y/R/B/O	NT_005795	AC060225	111136580	3			AC026354	111309044		47840	0	0	47840
S/G/Y/R/B/O	NT_005795	AC024887	111309044	3	chr3	NT_005795	AC128688	111406080	3	2985	0	0	2985
S/G/Y/R/B/O	NT_005795	AC024887	111309044	3			AC015778	111027425		64561	0	31763	96324
S/G/Y/R/B/O	NT_005795	AC024887	111309044	3			AC024964	111027425		26099	0	0	26099
S/G/Y/R/B/O	NT_005795	AC024887	111309044	3			AC110870	111136580		82157	0	16811	98968
S/G/Y/R/B/O	NT_005795	AC128688	111406080	3	chr3	NT_005795	AC119734	111484094	3	0	0	0	0
S/G/Y/R/B/O	NT_005795	AC128688	111406080	3			AC024964	111309044		14980	0	16730	31710
S/G/Y/R/B/O	NT_005795	AC128688	111406080	3			AC110870	111309044		53926	0	0	53926
S/G/Y/R/B/O	NT_005795	AC119734	111484094	3	chr3	NT_005795	AC112487	111591695	3	0	2002	0	2002
S/G/Y/R/B/O	NT_005795	AC119734	111484094	3			AC024964	111309044		36984	0	0	36984
S/G/Y/R/B/O	NT_005795	AC112487	111591695	3	chr3	NT_005795	AC092894	111669691	3	0	1857	0	1857
S/G/Y/R/B/O	NT_005795	AC112487	111591695	3			AC068958	111591695		54283	1704	0	55987
S/G/Y/R/B/O	NT_005795	AC092894	111669691	3	chr3	NT_005795	AC092692	111795685	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005795	AC092894	111669691	3			AC024131	111484094		65535	3695	30202	99432
S/G/Y/R/B/O	NT_005795	AC092894	111669691	3			AC068958	111484094		22576	0	46569	69145
S/G/Y/R/B/O	NT_005795	AC092894	111669691	3			AC079211	111484094		60687	0	0	60687
S/G/Y/R/B/O	NT_005795	AC092692	111795685	3	chr3	NT_005795	AC048334	111854486	3	2006	0	0	2006
S/G/Y/R/B/O	NT_005795	AC092692	111795685	3			AC024131	111591695		19027	0	0	19027
S/G/Y/R/B/O	NT_005795	AC092692	111795685	3			AC024709	111591695		24843	3157	32714	60714
S/G/Y/R/B/O	NT_005795	AC092692	111795685	3			AC079211	111854486		60219	0	0	60219
S/G/Y/R/B/O	NT_005795	AC048334	111854486	3	chr3	NT_005795	AC069516	112068199	3	2296	0	0	2296
S/G/Y/R/B/O	NT_005795	AC048334	111854486	3			AC024181	111669691		59059	1657	10071	70787
S/G/Y/R/B/O	NT_005795	AC048334	111854486	3			AC024709	111669691		100165	1668	1128	102961
S/G/Y/R/B/O	NT_005795	AC048334	111854486	3			AC079211	112068199		43417	0	0	43417
S/G/Y/R/B/O	NT_005795	AC069516	112068199	3	chr3	NT_005795	AC092892	112071903	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005795	AC092892	112071903	3	chr3	NT_005795	AC074044	112118370	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005795	AC092892	112071903	3			AC024181	112071903		34138	6507	6325	46970
S/G/Y/R/B/O	NT_005795	AC074044	112118370	3	chr3	NT_005795	AC078785	112310372	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005795	AC074044	112118370	3			AC024108	112118370		156034	0	0	156034
S/G/Y/R/B/O	NT_005795	AC074044	112118370	3			AC026559	112118370		89272	0	0	89272
S/G/Y/R/B/O	NT_005795	AC074044	112118370	3			AC092911	112071903		163862	0	0	163862
S/G/Y/R/B/O	NT_005795	AC078785	112310372	3	chr3	NT_005795	AC026329	112494107	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005795	AC078785	112310372	3			AC021655	112071903		41718	4622	36358	82698
S/G/Y/R/B/O	NT_005795	AC078785	112310372	3			AC024108	112071903		64709	0	2109	66818
S/G/Y/R/B/O	NT_005795	AC026329	112494107	3	chr3	NT_005795	AC026348	112609509	3	0	0	0	0
S/G/Y/R/B/O	NT_005795	AC026329	112494107	3			AC055706	112118370		32240	2335	7134	41709
S/G/Y/R/B/O	NT_005795	AC026348	112609509	3	chr3	NT_005795	AC023894	112644097	1	0	0	0	0
S/G/Y/R/B/O	NT_005795	AC026348	112609509	3			AC055706	112310372		10878	2871	0	13749
S/G/Y/R/B/O	NT_005795	AC023894	112644097	1	chr3	NT_005795	AC112128	112711659	3	87541	0	0	87541
S/G/Y/R/B/O	NT_005795	AC023894	112644097	1			AC021695	112310372		24723	2744	2437	29904
S/G/Y/R/B/O	NT_005795	AC112128	112711659	3	chr3	NT_005795	AC055740	112891263	3	56009	0	0	56009
S/G/Y/R/B/O	NT_005795	AC112128	112711659	3			AC021695	112711659		64439	2744	54238	121421
S/G/Y/R/B/O	NT_005795	AC055740	112891263	3	chr3	NT_005795	AC108693	112982864	3	2007	0	0	2007
S/G/Y/R/B/O	NT_005795	AC055740	112891263	3			AC019247	112891263		54936	0	3377	58313
S/G/Y/R/B/O	NT_005795	AC055740	112891263	3			AC021695	112891263		56199	0	0	56199
S/G/Y/R/B/O	NT_005795	AC108693	112982864	3	chr3	NT_005795	AC079944	113079298	3	2031	0	0	2031
S/G/Y/R/B/O	NT_005795	AC108693	112982864	3			AC011022	112711659		56032	0	0	56032
S/G/Y/R/B/O	NT_005795	AC108693	112982864	3			AC019247	112711659		60847	6523	1343	68713
S/G/Y/R/B/O	NT_005795	AC108693	112982864	3			AC107298	113079298		56839	0	0	56839
S/G/Y/R/B/O	NT_005795	AC079944	113079298	3	chr3	NT_005795	AC128687	113205593	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005795	AC079944	113079298	3			AC011022	113079298		64334	1542	29415	95291
S/G/Y/R/B/O	NT_005795	AC079944	113079298	3			AC023963	113079298		49584	0	2005	51589
S/G/Y/R/B/O	NT_005795	AC079944	113079298	3			AC107298	113079298		26307	0	13683	39990
S/G/Y/R/B/O	NT_005795	AC128687	113205593	3	chr3	NT_005795	AC092896	113293930	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005795	AC128687	113205593	3			AC023963	113205593		14086	0	16121	30207
S/G/Y/R/B/O	NT_005795	AC092896	113293930	3	chr3	NT_005795	AC093010	113464260	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005795	AC092896	113293930	3			AC023645	113293930		147433	3735	12747	163915
S/G/Y/R/B/O	NT_005795	AC092896	113293930	3			AC023963	113293930		20483	0	0	20483
S/G/Y/R/B/O	NT_005795	AC092896	113293930	3			AC027054	113293930		26651	5246	4845	36742
S/G/Y/R/B/O	NT_005795	AC093010	113464260	3	chr3	NT_005795	AC131152	113623333	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005795	AC093010	113464260	3			AC027054	113205593		109933	6618	17795	134346
S/G/Y/R/B/O	NT_005795	AC093010	113464260	3			AC068938	113205593		26919	9866	8863	45648
S/G/Y/R/B/O	NT_005795	AC093010	113464260	3			AC073407	113205593		29899	4618	10825	45342
S/G/Y/R/B/O	NT_005795	AC093010	113464260	3			AC084188	113205593		27403	7899	12374	47676
S/G/Y/R/B/O	NT_005795	AC093010	113464260	3			AC107422	113293930		16576	0	25628	42204
S/G/Y/R/B/O	NT_005795	AC131152	113623333	3	chr3	NT_005795	AC083886	113671047	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005795	AC131152	113623333	3			AC068938	113623333		27637	9374	4700	41711
S/G/Y/R/B/O	NT_005795	AC131152	113623333	3			AC073407	113623333		49202	0	0	49202
S/G/Y/R/B/O	NT_005795	AC131152	113623333	3			AC084188	113671047		48360	830	0	49190
S/G/Y/R/B/O	NT_005795	AC131152	113623333	3			AC090552	113671047		28354	0	8570	36924
S/G/Y/R/B/O	NT_005795	AC131152	113623333	3			AC107422	113464260		49373	0	0	49373
S/G/Y/R/B/O	NT_005795	AC083886	113671047	3	chr3	NT_005795	AC055739	113763582	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005795	AC083886	113671047	3			AC068938	113763582		21478	2444	2610	26532
S/G/Y/R/B/O	NT_005795	AC083886	113671047	3			AC073407	113763582		27093	0	1489	28582
S/G/Y/R/B/O	NT_005795	AC083886	113671047	3			AC084188	113763582		37030	16783	1524	55337
S/G/Y/R/B/O	NT_005795	AC083886	113671047	3			AC090552	113763582		19445	0	30634	50079
S/G/Y/R/B/O	NT_005795	AC083886	113671047	3			AC107422	113763582		28633	0	0	28633
S/G/Y/R/B/O	NT_005795	AC055739	113763582	3	chr3	NT_005795	AC078986	113897579	3	0	1976	0	1976
S/G/Y/R/B/O	NT_005795	AC055739	113763582	3			AC068978	113623333		45931	14575	23667	84173
S/G/Y/R/B/O	NT_005795	AC078986	113897579	3	chr3	NT_005795	AC069506	114062119	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005795	AC078986	113897579	3			AC068978	113763582		30079	598	3374	34051
S/G/Y/R/B/O	NT_005795	AC069506	114062119	3	chr3	NT_005795	AC092900	114191388	1	102278	0	0	102278
S/G/Y/R/B/O	NT_005795	AC069506	114062119	3			AC026560	114062119		51151	2692	3264	57107
S/G/Y/R/B/O	NT_005795	AC092900	114191388	1	chr3	NT_005795	AC092915	114191389	3	0	0	35482	35482
S/G/Y/R/B/O	NT_005795	AC092900	114191388	1			AC026560	114191388		116926	2697	0	119623
S/G/Y/R/B/O	NT_005795	AC092900	114191388	1			AC027493	114191388		38979	0	0	38979
S/G/Y/R/B/O	NT_005795	AC092915	114191389	3	chr3	NT_005795	AC069063	114378604	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005795	AC092915	114191389	3			AC026560	114191389		35483	0	0	35483
S/G/Y/R/B/O	NT_005795	AC092915	114191389	3			AC027493	114191389		85138	0	0	85138
S/G/Y/R/B/O	NT_005795	AC069063	114378604	3

NT_015150

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_015150	AC046136	114498726	3	chr3	NT_015150	AC131208	114654553	3	0	1993	0	1993
S/G/Y/R/B/O	NT_015150	AC046136	114498726	3			AC021376	114191389		103075	0	0	103075
S/G/Y/R/B/O	NT_015150	AC131208	114654553	3	chr3	NT_015150	AC026341	114710434	3	0	1992	0	1992
S/G/Y/R/B/O	NT_015150	AC131208	114654553	3			AC021376	114654553		11977	0	0	11977
S/G/Y/R/B/O	NT_015150	AC131208	114654553	3			AC120106	114498726		11978	0	0	11978
S/G/Y/R/B/O	NT_015150	AC026341	114710434	3	chr3	NT_015150	AC092468	114864831	3	0	1995	0	1995
S/G/Y/R/B/O	NT_015150	AC026341	114710434	3			AC027525	114498726		52036	7181	1769	60986
S/G/Y/R/B/O	NT_015150	AC092468	114864831	3	chr3	NT_015150	AC119795	114977264	3	0	1995	0	1995
S/G/Y/R/B/O	NT_015150	AC092468	114864831	3			AC027525	114710434		83563	9263	1100	93926
S/G/Y/R/B/O	NT_015150	AC119795	114977264	3	chr3	NT_015150	AC012598	114988557	3	2000	0	0	2000
S/G/Y/R/B/O	NT_015150	AC012598	114988557	3	chr3	NT_015150	AC067725	115150089	3	0	2001	0	2001
S/G/Y/R/B/O	NT_015150	AC012598	114988557	3			AC093228	115150089		29526	0	571	30097
S/G/Y/R/B/O	NT_015150	AC067725	115150089	3	chr3	NT_015150	AC084408	115210438	3	2000	0	0	2000
S/G/Y/R/B/O	NT_015150	AC084408	115210438	3	chr3	NT_015150	AC078813	115308939	3	2407	0	0	2407
S/G/Y/R/B/O	NT_015150	AC078813	115308939	3	chr3	NT_015150	AC021657	115448532	3	0	1672	0	1672
S/G/Y/R/B/O	NT_015150	AC021657	115448532	3	chr3	NT_015150	AC078805	115616906	3	0	1241	0	1241
S/G/Y/R/B/O	NT_015150	AC021657	115448532	3			AC011112	115210438		76996	0	2134	79130
S/G/Y/R/B/O	NT_015150	AC021657	115448532	3			AC130407	115308939		78228	0	0	78228
S/G/Y/R/B/O	NT_015150	AC078805	115616906	3	chr3	NT_015150	AC078784	115726657	3	0	1995	0	1995
S/G/Y/R/B/O	NT_015150	AC078805	115616906	3			AC011112	115308939		26891	0	8366	35257
S/G/Y/R/B/O	NT_015150	AC078805	115616906	3			AC123566	115726657		14581	0	0	14581
S/G/Y/R/B/O	NT_015150	AC078784	115726657	3	chr3	NT_015150	AC108687	115890075	3	0	1999	0	1999
S/G/Y/R/B/O	NT_015150	AC078784	115726657	3			AC068087	115726657		71761	1687	1110	74558
S/G/Y/R/B/O	NT_015150	AC078784	115726657	3			AC078801	115726657		21086	0	0	21086
S/G/Y/R/B/O	NT_015150	AC078784	115726657	3			AC123566	115890075		20363	0	0	20363
S/G/Y/R/B/O	NT_015150	AC108687	115890075	3	chr3	NT_015150	AC108713	116016897	3	0	0	80613	80613
S/G/Y/R/B/O	NT_015150	AC108687	115890075	3			AC013742	115890075		26138	13650	9021	48809
S/G/Y/R/B/O	NT_015150	AC108687	115890075	3			AC068159	115890075		83175	2696	7778	93649
S/G/Y/R/B/O	NT_015150	AC108713	116016897	3	chr3	NT_015150	AC112126	116094913	3	70240	0	0	70240
S/G/Y/R/B/O	NT_015150	AC108713	116016897	3			AC011259	116016897		48652	0	22007	70659
S/G/Y/R/B/O	NT_015150	AC108713	116016897	3			AC013742	116016897		36092	33091	19899	89082
S/G/Y/R/B/O	NT_015150	AC108713	116016897	3			AC068159	116016897		58515	1599	6750	66864
S/G/Y/R/B/O	NT_015150	AC112126	116094913	3
S/G/Y/R/B/O	NT_015150	AC112126	116094913	3			AC011259	116129188		72927	0	23047	95974

NT_022445

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022445	AC133796	116129188	3	chr3	NT_022445	AC069504	116252354	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022445	AC069504	116252354	3	chr3	NT_022445	AC068303	116291978	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022445	AC068303	116291978	3	chr3	NT_022445	AC021889	116462673	3	42380	0	0	42380
S/G/Y/R/B/O	NT_022445	AC068303	116291978	3			AC048349	116462673		13035	2897	8511	24443
S/G/Y/R/B/O	NT_022445	AC068303	116291978	3			AC068996	116462673		101245	0	4465	105710
S/G/Y/R/B/O	NT_022445	AC021889	116462673	3	chr3	NT_022445	AC055710	116599039	3	10209	0	0	10209
S/G/Y/R/B/O	NT_022445	AC055710	116599039	3	chr3	NT_022445	AC117428	116758771	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022445	AC117428	116758771	3	chr3	NT_022445	AC021867	116769218	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022445	AC021867	116769218	3

NT_005994

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005994	AC026762	116924028	3	chr3	NT_005994	AC127902	116976808	3	0	1993	0	1993
S/G/Y/R/B/O	NT_005994	AC127902	116976808	3	chr3	NT_005994	AC092691	116986049	3	0	2000	0	2000
S/G/Y/R/B/O	NT_005994	AC092691	116986049	3	chr3	NT_005994	AC128684	117154261	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005994	AC128684	117154261	3	chr3	NT_005994	AC020650	117232564	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005994	AC020650	117232564	3	chr3	NT_005994	AC026343	117304559	3	0	1973	0	1973
S/G/Y/R/B/O	NT_005994	AC026343	117304559	3	chr3	NT_005994	AC023793	117471200	3	0	0	63244	63244
S/G/Y/R/B/O	NT_005994	AC023793	117471200	3	chr3	NT_005994	AC117412	117558761	3	0	2003	0	2003
S/G/Y/R/B/O	NT_005994	AC117412	117558761	3	chr3	NT_005994	AC072041	117609739	3	0	0	1690	1690
S/G/Y/R/B/O	NT_005994	AC072041	117609739	3	chr3	NT_005994	AC068633	117719550	3	0	1997	0	1997
S/G/Y/R/B/O	NT_005994	AC072041	117609739	3			AC026344	117609739		40723	0	9571	50294
S/G/Y/R/B/O	NT_005994	AC068633	117719550	3	chr3	NT_005994	AC092743	117879285	3	0	1949	0	1949
S/G/Y/R/B/O	NT_005994	AC068633	117719550	3			AC016918	117558761		78172	0	0	78172
S/G/Y/R/B/O	NT_005994	AC068633	117719550	3			AC092772	117879285		43362	0	0	43362
S/G/Y/R/B/O	NT_005994	AC092743	117879285	3	chr3	NT_005994	AC026360	117947729	3	2036	0	0	2036
S/G/Y/R/B/O	NT_005994	AC026360	117947729	3	chr3	NT_005994	AC026330	118022973	3	0	0	0	0
S/G/Y/R/B/O	NT_005994	AC026360	117947729	3			AC092772	117879285		60986	0	0	60986
S/G/Y/R/B/O	NT_005994	AC026330	118022973	3	chr3	NT_005994	AC068984	118210978	3	0	0	0	0
S/G/Y/R/B/O	NT_005994	AC026330	118022973	3			AC005827	117879285		94186	0	0	94186
S/G/Y/R/B/O	NT_005994	AC068984	118210978	3	chr3	NT_005994	AC007023	118260028	3	2984	0	0	2984
S/G/Y/R/B/O	NT_005994	AC007023	118260028	3	chr3	NT_005994	AC012032	118405498	3	0	0	0	0
S/G/Y/R/B/O	NT_005994	AC012032	118405498	3	chr3	NT_005994	AC083800	118433287	3	0	0	1660	1660
S/G/Y/R/B/O	NT_005994	AC083800	118433287	3	chr3	NT_005994	AC092981	118612683	3	0	0	0	0
S/G/Y/R/B/O	NT_005994	AC092981	118612683	3	chr3	NT_005994	AC074271	118771298	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005994	AC092981	118612683	3			AC012332	118405498		101713	0	774	102487
S/G/Y/R/B/O	NT_005994	AC092981	118612683	3			AC017034	118405498		104072	0	0	104072
S/G/Y/R/B/O	NT_005994	AC074271	118771298	3	chr3	NT_005994	AC073352	118830475	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005994	AC074271	118771298	3			AC012332	118771298		61449	1093	0	62542
S/G/Y/R/B/O	NT_005994	AC073352	118830475	3	chr3	NT_005994	AC023494	118990213	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005994	AC073352	118830475	3			AC012332	118612683		13128	0	0	13128
S/G/Y/R/B/O	NT_005994	AC073352	118830475	3			AC069519	118990213		84768	5131	4634	94533
S/G/Y/R/B/O	NT_005994	AC023494	118990213	3	chr3	NT_005994	AC117466	119046175	3	0	0	0	0
S/G/Y/R/B/O	NT_005994	AC023494	118990213	3			AC069519	118771298		22143	2513	9788	34444
S/G/Y/R/B/O	NT_005994	AC117466	119046175	3	chr3	NT_005994	AC069444	119074602	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005994	AC069444	119074602	3	chr3	NT_005994	AC078856	119237694	3	0	0	0	0
S/G/Y/R/B/O	NT_005994	AC078856	119237694	3	chr3	NT_005994	AC092910	119351219	3	56817	0	0	56817
S/G/Y/R/B/O	NT_005994	AC092910	119351219	3	chr3	NT_005994	AC024217	119472712	3	0	2062	0	2062
S/G/Y/R/B/O	NT_005994	AC092910	119351219	3			AC021885	119351219		63158	0	37371	100529
S/G/Y/R/B/O	NT_005994	AC024217	119472712	3

NT_005513

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005513	AC092897	119500149	3	chr3	NT_005513	AC063952	119627193	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005513	AC092897	119500149	3			AC024927	119351219		51438	2146	12997	66581
S/G/Y/R/B/O	NT_005513	AC063952	119627193	3	chr3	NT_005513	AC078982	119777210	3	0	1997	0	1997
S/G/Y/R/B/O	NT_005513	AC063952	119627193	3			AC024927	119627193		29062	5715	8322	43099
S/G/Y/R/B/O	NT_005513	AC063952	119627193	3			AC068844	119627193		46243	3514	12676	62433
S/G/Y/R/B/O	NT_005513	AC078982	119777210	3	chr3	NT_005513	AC106725	119809322	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005513	AC078982	119777210	3			AC068844	119627193		34663	0	0	34663
S/G/Y/R/B/O	NT_005513	AC106725	119809322	3	chr3	NT_005513	AC009289	120006266	3	90904	0	0	90904
S/G/Y/R/B/O	NT_005513	AC106725	119809322	3			AC012534	120006266		60173	5703	538	66414
S/G/Y/R/B/O	NT_005513	AC106725	119809322	3			AC068844	120006266		45408	4077	0	49485
S/G/Y/R/B/O	NT_005513	AC106725	119809322	3			AC078787	120006266		66019	0	610	66629
S/G/Y/R/B/O	NT_005513	AC106725	119809322	3			AC107014	119777210		32938	0	0	32938
S/G/Y/R/B/O	NT_005513	AC009289	120006266	3	chr3	NT_005513	AC133474	120061163	3	56901	0	0	56901
S/G/Y/R/B/O	NT_005513	AC009289	120006266	3			AC012534	120061163		31362	0	538	31900
S/G/Y/R/B/O	NT_005513	AC133474	120061163	3	chr3	NT_005513	AC117472	120068091	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005513	AC117472	120068091	3	chr3	NT_005513	AC072026	120187821	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005513	AC117472	120068091	3			AC023661	120068091		26127	0	0	26127
S/G/Y/R/B/O	NT_005513	AC117472	120068091	3			AC027454	120068091		92418	3965	0	96383
S/G/Y/R/B/O	NT_005513	AC117472	120068091	3			AC067734	120068091		10325	0	17420	27745
S/G/Y/R/B/O	NT_005513	AC072026	120187821	3	chr3	NT_005513	AC078857	120317086	3	0	0	0	0
S/G/Y/R/B/O	NT_005513	AC072026	120187821	3			AC023661	120061163		109805	0	6321	116126
S/G/Y/R/B/O	NT_005513	AC072026	120187821	3			AC024926	120061163		12798	2862	6619	22279
S/G/Y/R/B/O	NT_005513	AC072026	120187821	3			AC027454	120061163		55921	6626	4498	67045
S/G/Y/R/B/O	NT_005513	AC072026	120187821	3			AC067734	120061163		13832	4923	12861	31616
S/G/Y/R/B/O	NT_005513	AC072026	120187821	3			AC069258	120061163		53212	20911	21375	95498
S/G/Y/R/B/O	NT_005513	AC078857	120317086	3	chr3	NT_005513	AC128659	120505141	3	0	0	1734	1734
S/G/Y/R/B/O	NT_005513	AC078857	120317086	3			AC024926	120068091		13885	0	4300	18185
S/G/Y/R/B/O	NT_005513	AC078857	120317086	3			AC069258	120068091		14072	0	2929	17001
S/G/Y/R/B/O	NT_005513	AC128659	120505141	3	chr3	NT_005513	AC078854	120539089	3	0	0	1228	1228
S/G/Y/R/B/O	NT_005513	AC078854	120539089	3	chr3	NT_005513	AC112483	120699396	3	0	0	0	0
S/G/Y/R/B/O	NT_005513	AC078854	120539089	3			AC044904	120317086		32120	1794	10178	44092
S/G/Y/R/B/O	NT_005513	AC112483	120699396	3	chr3	NT_005513	AC079841	120703981	3	0	0	0	0
S/G/Y/R/B/O	NT_005513	AC079841	120703981	3	chr3	NT_005513	AC069239	120869836	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005513	AC079841	120703981	3			AC022194	120505141		36003	11306	4069	51378
S/G/Y/R/B/O	NT_005513	AC069239	120869836	3	chr3	NT_005513	AC063920	120955852	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005513	AC069239	120869836	3			AC022194	120869836		38391	0	10755	49146
S/G/Y/R/B/O	NT_005513	AC063920	120955852	3	chr3	NT_005513	AC133750	120988284	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005513	AC063920	120955852	3			AC024907	120703981		34427	0	0	34427
S/G/Y/R/B/O	NT_005513	AC133750	120988284	3	chr3	NT_005513	AC119736	121073670	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005513	AC133750	120988284	3			AC024907	120988284		87094	0	0	87094
S/G/Y/R/B/O	NT_005513	AC133750	120988284	3			AC024907	120988284		87094	0	0	87094
S/G/Y/R/B/O	NT_005513	AC119736	121073670	3	chr3	NT_005513	AC072031	121233745	3	2059	0	0	2059
S/G/Y/R/B/O	NT_005513	AC119736	121073670	3			AC024907	121073670		22214	0	16033	38247
S/G/Y/R/B/O	NT_005513	AC119736	121073670	3			AC027294	121073670		50071	0	0	50071
S/G/Y/R/B/O	NT_005513	AC119736	121073670	3			AC125619	121233745		52330	0	34119	86449
S/G/Y/R/B/O	NT_005513	AC119736	121073670	3			AC125619	121233745		52330	0	34119	86449
S/G/Y/R/B/O	NT_005513	AC072031	121233745	3

NT_037577

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037577	AC126182	121338585	1
S/G/Y/R/B/O	NT_037577	AC126182	121338585	1	chr3	NT_005775	AC021059	149573435	3	23646	3924	3564	31134
S/G/Y/R/B/O	NT_037577	AC126182	121338585	1	chr3	NT_005775	AC131209	149735506	3	38480	2410	0	40890
S/G/Y/R/B/O	NT_037577	AC126182	121338585	1			AC068577	149573435		89615	4306	15474	109395
S/G/Y/R/B/O	NT_037577	AC126182	121338585	1			AC072027	149573435		39715	8732	6803	55250

NT_037578

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037578	AC080098	121504059	3

NT_005543

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005543	AC026766	121591909	1	chr3	NT_005543	AC068630	121597311	3	0	0	0	0
S/G/Y/R/B/O	NT_005543	AC026766	121591909	1	chr3	NT_005543	AC068754	121761572	1	28359	0	13168	41527
S/G/Y/R/B/O	NT_005543	AC026766	121591909	1	chr3	NT_005543	AC083798	121952694	3	26728	0	0	26728
S/G/Y/R/B/O	NT_005543	AC068630	121597311	3	chr3	NT_005543	AC068754	121761572	1	0	0	0	0
S/G/Y/R/B/O	NT_005543	AC068754	121761572	1	chr3	NT_005543	AC083798	121952694	3	0	0	0	0
S/G/Y/R/B/O	NT_005543	AC068754	121761572	1	chr3	NT_005543	AC026766	121591909	1	28359	0	13168	41527
S/G/Y/R/B/O	NT_005543	AC083798	121952694	3	chr3	NT_005543	AC096861	122098299	3	0	0	0	0
S/G/Y/R/B/O	NT_005543	AC083798	121952694	3	chr3	NT_005543	AC026766	121591909	1	26728	0	0	26728
S/G/Y/R/B/O	NT_005543	AC096861	122098299	3	chr3	NT_005543	AC092908	122195473	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005543	AC092908	122195473	3	chr3	NT_005543	AC048348	122367728	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005543	AC092908	122195473	3			AC026506	122195473		115783	11070	12288	139141
S/G/Y/R/B/O	NT_005543	AC048348	122367728	3	chr3	NT_005543	AC078794	122464587	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005543	AC048348	122367728	3			AC010858	122098299		78633	10170	1310	90113
S/G/Y/R/B/O	NT_005543	AC048348	122367728	3			AC112130	122195473		10811	0	28783	39594
S/G/Y/R/B/O	NT_005543	AC078794	122464587	3	chr3	NT_005543	AC109130	122619254	3	0	0	0	0
S/G/Y/R/B/O	NT_005543	AC078794	122464587	3			AC010858	122195473		36736	0	399	37135
S/G/Y/R/B/O	NT_005543	AC078794	122464587	3			AC011116	122195473		131648	6617	11096	149361
S/G/Y/R/B/O	NT_005543	AC078794	122464587	3			AC084300	122367728		122066	7687	1858	131611
S/G/Y/R/B/O	NT_005543	AC078794	122464587	3			AC092975	122367728		125729	2452	20693	148874
S/G/Y/R/B/O	NT_005543	AC109130	122619254	3	chr3	NT_005543	AC083797	122687588	3	0	1997	0	1997
S/G/Y/R/B/O	NT_005543	AC109130	122619254	3			AC016320	122367728		41628	1539	0	43167
S/G/Y/R/B/O	NT_005543	AC109130	122619254	3			AC084300	122687588		14163	2328	0	16491
S/G/Y/R/B/O	NT_005543	AC083797	122687588	3	chr3	NT_005543	AC063922	122842703	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005543	AC083797	122687588	3			AC016320	122687588		120147	1672	0	121819
S/G/Y/R/B/O	NT_005543	AC063922	122842703	3	chr3	NT_005543	AC112503	122938520	3	0	1988	0	1988
S/G/Y/R/B/O	NT_005543	AC112503	122938520	3	chr3	NT_005543	AC025571	123020820	3	0	1941	0	1941
S/G/Y/R/B/O	NT_005543	AC025571	123020820	3	chr3	NT_005543	AC020631	123178718	3	0	1927	0	1927
S/G/Y/R/B/O	NT_005543	AC025571	123020820	3			AC023601	123178718		93947	0	19898	113845
S/G/Y/R/B/O	NT_005543	AC020631	123178718	3	chr3	NT_005543	AC084039	123211352	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005543	AC020631	123178718	3			AC023601	122938520		32619	0	0	32619
S/G/Y/R/B/O	NT_005543	AC084039	123211352	3	chr3	NT_005543	AC023165	123228452	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005543	AC023165	123228452	3	chr3	NT_005543	AC020634	123321423	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005543	AC023165	123228452	3			AC074128	123321423		84453	1741	4200	90394
S/G/Y/R/B/O	NT_005543	AC020634	123321423	3	chr3	NT_005543	AC117381	123500598	3	0	1997	0	1997
S/G/Y/R/B/O	NT_005543	AC020634	123321423	3			AC078808	123228452		12392	0	3551	15943
S/G/Y/R/B/O	NT_005543	AC117381	123500598	3	chr3	NT_005543	AC117401	123704527	3	0	1634	0	1634
S/G/Y/R/B/O	NT_005543	AC117381	123500598	3			AC078808	123321423		46405	2159	37326	85890
S/G/Y/R/B/O	NT_005543	AC117401	123704527	3	chr3	NT_005543	AC112129	123900253	3	33481	0	0	33481
S/G/Y/R/B/O	NT_005543	AC117401	123704527	3			AC016307	123704527		27340	0	5993	33333
S/G/Y/R/B/O	NT_005543	AC117401	123704527	3			AC078866	123704527		93017	0	19247	112264
S/G/Y/R/B/O	NT_005543	AC112129	123900253	3	chr3	NT_005543	AC130427	124030393	1	0	1206	0	1206
S/G/Y/R/B/O	NT_005543	AC112129	123900253	3	chr3	NT_005543	AC069233	124035024	1	30872	0	0	30872
S/G/Y/R/B/O	NT_005543	AC112129	123900253	3	chr3	NT_005543	AC069233	124035024	1	30872	0	0	30872
S/G/Y/R/B/O	NT_005543	AC112129	123900253	3			AC016307	123500598		113014	5990	16236	135240
S/G/Y/R/B/O	NT_005543	AC112129	123900253	3			AC078866	124035024		38648	0	15282	53930
S/G/Y/R/B/O	NT_005543	AC130427	124030393	1	chr3	NT_005543	AC069233	124035024	1	50403	0	29128	79531
S/G/Y/R/B/O	NT_005543	AC130427	124030393	1	chr3	NT_005543	AC026603	124205135	1	15066	0	0	15066
S/G/Y/R/B/O	NT_005543	AC130427	124030393	1			AC016530	124030393		48764	3014	42544	94322
S/G/Y/R/B/O	NT_005543	AC130427	124030393	1			AC080008	124035024		29430	0	546	29976
S/G/Y/R/B/O	NT_005543	AC130427	124030393	1			AC092961	124035024		14998	0	0	14998
S/G/Y/R/B/O	NT_005543	AC130427	124030393	1			AC112133	123900253		11160	0	4639	15799
S/G/Y/R/B/O	NT_005543	AC069233	124035024	1	chr3	NT_005543	AC026603	124205135	1	0	0	0	0
S/G/Y/R/B/O	NT_005543	AC069233	124035024	1	chr3	NT_005543	AC112129	123900253	3	30872	0	0	30872
S/G/Y/R/B/O	NT_005543	AC069233	124035024	1	chr3	NT_005543	AC112129	123900253	3	30872	0	0	30872
S/G/Y/R/B/O	NT_005543	AC069233	124035024	1			AC016307	60992514		24342	2118	0	26460
S/G/Y/R/B/O	NT_005543	AC069233	124035024	1			AC016307	60992514		24342	2118	0	26460
S/G/Y/R/B/O	NT_005543	AC069233	124035024	1			AC016530	60992514		48780	4217	32415	85412
S/G/Y/R/B/O	NT_005543	AC069233	124035024	1			AC016530	60992514		48780	4217	32415	85412
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1	chr3	NT_005543	AC022336	124444585	3	16454	0	0	16454
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1	chr3	NT_005543	AC130427	124030393	1	15066	0	0	15066
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1			AC013494	131375000		116355	5200	0	121555
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1			AC016530	131375000		10338	0	4428	14766
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1			AC055741	124444585		119122	4818	10591	134531
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1			AC080008	124444585		177696	7076	637	185409
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1			AC092961	124444585		177881	7086	9003	193970
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1			AC112133	124444585		103175	12196	39858	155229
S/G/Y/R/B/O	NT_005543	AC026603	124205135	1			AC130410	124444585		98160	5200	19208	122568
S/G/Y/R/B/O	NT_005543	AC022336	124444585	3
S/G/Y/R/B/O	NT_005543	AC022336	124444585	3			AC013494	124030393		59661	4328	0	63989
S/G/Y/R/B/O	NT_005543	AC022336	124444585	3			AC055741	124205135		77701	0	3924	81625
S/G/Y/R/B/O	NT_005543	AC022336	124444585	3			AC080008	124205135		13372	0	0	13372
S/G/Y/R/B/O	NT_005543	AC022336	124444585	3			AC092961	124205135		17040	0	0	17040
S/G/Y/R/B/O	NT_005543	AC022336	124444585	3			AC130410	124205135		64819	0	18618	83437

NT_005588

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005588	AC092983	124620656	1	chr3	NT_005588	AC117488	124654099	1	21974	0	0	21974
S/G/Y/R/B/O	NT_005588	AC092983	124620656	1			AC026342	124205135		74624	0	0	74624
S/G/Y/R/B/O	NT_005588	AC117488	124654099	1	chr3	NT_005588	AC055752	124836312	3	53434	0	0	53434
S/G/Y/R/B/O	NT_005588	AC117488	124654099	1			AC067998	124836312		16832	5068	1688	23588
S/G/Y/R/B/O	NT_005588	AC117488	124654099	1			AC129730	86075425		32499	0	0	32499
S/G/Y/R/B/O	NT_005588	AC117488	124654099	1			AL357119	86076042		40869	1992	4930	47791
S/G/Y/R/B/O	NT_005588	AC055752	124836312	3	chr3	NT_005588	AC108688	124952712	3	0	2001	0	2001
S/G/Y/R/B/O	NT_005588	AC055752	124836312	3			AC067998	86076042		47503	13017	2932	63452
S/G/Y/R/B/O	NT_005588	AC055752	124836312	3			AC129730	124654099		94036	0	0	94036
S/G/Y/R/B/O	NT_005588	AC108688	124952712	3	chr3	NT_005588	AC080096	125134041	3	0	0	1735	1735
S/G/Y/R/B/O	NT_005588	AC108688	124952712	3			AC019289	124654099		78287	0	25029	103316
S/G/Y/R/B/O	NT_005588	AC108688	124952712	3			AC026618	124654099		94731	9649	28075	132455
S/G/Y/R/B/O	NT_005588	AC108688	124952712	3			AC032043	124654099		173753	4042	1342	179137
S/G/Y/R/B/O	NT_005588	AC108688	124952712	3			AC067998	124836312		41182	5537	4657	51376
S/G/Y/R/B/O	NT_005588	AC108688	124952712	3			AC092893	125134041		14884	0	33250	48134
S/G/Y/R/B/O	NT_005588	AC108688	124952712	3			AL357119	125134041		74806	0	10227	85033
S/G/Y/R/B/O	NT_005588	AC080096	125134041	3	chr3	NT_005588	AC117487	125219686	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005588	AC117487	125219686	3	chr3	NT_005588	AC016959	125276332	3	0	2060	0	2060
S/G/Y/R/B/O	NT_005588	AC117487	125219686	3			AF238377	125134041		10293	0	0	10293
S/G/Y/R/B/O	NT_005588	AC016959	125276332	3	chr3	NT_005588	AC110873	125415389	3	0	2065	0	2065
S/G/Y/R/B/O	NT_005588	AC016959	125276332	3			AF238377	125219686		45952	0	41439	87391
S/G/Y/R/B/O	NT_005588	AC110873	125415389	3	chr3	NT_005588	AF186996	125453280	3	0	0	0	0
S/G/Y/R/B/O	NT_005588	AC110873	125415389	3			AF238377	125276332		21575	0	0	21575
S/G/Y/R/B/O	NT_005588	AF186996	125453280	3	chr3	NT_005588	AC092902	125509609	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005588	AF186996	125453280	3			AC069047	125276332		23240	0	6342	29582
S/G/Y/R/B/O	NT_005588	AF186996	125453280	3			AF238377	11734248		17575	0	0	17575
S/G/Y/R/B/O	NT_005588	AC092902	125509609	3	chr3	NT_005588	AC092903	125631680	3	0	1994	0	1994
S/G/Y/R/B/O	NT_005588	AC092902	125509609	3			AC069047	11734248		52005	1657	24811	78473
S/G/Y/R/B/O	NT_005588	AC092902	125509609	3			AC069047	11734248		52005	1657	24811	78473
S/G/Y/R/B/O	NT_005588	AC092902	125509609	3			AF271408	125453280		57384	0	49775	107159
S/G/Y/R/B/O	NT_005588	AC092902	125509609	3			AF271408	125453280		57384	0	49775	107159
S/G/Y/R/B/O	NT_005588	AC092903	125631680	3	chr3	NT_005588	AC117422	125792821	3	0	0	1761	1761
S/G/Y/R/B/O	NT_005588	AC092903	125631680	3			AC026957	125453280		85075	0	7115	92190
S/G/Y/R/B/O	NT_005588	AC092903	125631680	3			AF271408	125792821		23678	0	13378	37056
S/G/Y/R/B/O	NT_005588	AC117422	125792821	3	chr3	NT_005588	AC079848	125822507	3	0	0	0	0
S/G/Y/R/B/O	NT_005588	AC079848	125822507	3	chr3	NT_005588	AC016924	125982499	3	0	0	1088	1088
S/G/Y/R/B/O	NT_005588	AC016924	125982499	3	chr3	NT_005588	AC063919	126029564	3	0	0	0	0
S/G/Y/R/B/O	NT_005588	AC063919	126029564	3	chr3	NT_005588	AC073439	126180760	1	28431	0	14188	42619
S/G/Y/R/B/O	NT_005588	AC073439	126180760	1	chr3	NT_005588	AC024558	126189247	3	0	0	80887	80887
S/G/Y/R/B/O	NT_005588	AC024558	126189247	3	chr3	NT_005588	AC078867	126405408	3	0	0	1937	1937
S/G/Y/R/B/O	NT_005588	AC024558	126189247	3			AC068818	126029564		29707	1905	0	31612
S/G/Y/R/B/O	NT_005588	AC078867	126405408	3	chr3	NT_005588	AC092898	126534029	3	0	1924	0	1924
S/G/Y/R/B/O	NT_005588	AC078867	126405408	3			AC068818	126189247		51465	0	29800	81265
S/G/Y/R/B/O	NT_005588	AC078867	126405408	3			AC129624	126534029		36791	2942	24791	64524
S/G/Y/R/B/O	NT_005588	AC092898	126534029	3	chr3	NT_005588	AC117450	126654951	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005588	AC117450	126654951	3	chr3	NT_005588	AC011199	126656949	3	0	0	62984	62984
S/G/Y/R/B/O	NT_005588	AC011199	126656949	3	chr3	NT_005588	AC112482	126809078	3	0	0	0	0
S/G/Y/R/B/O	NT_005588	AC011199	126656949	3			AC130566	126654951		152073	0	0	152073
S/G/Y/R/B/O	NT_005588	AC112482	126809078	3	chr3	NT_005588	AC133681	126991994	3	0	2001	0	2001
S/G/Y/R/B/O	NT_005588	AC112482	126809078	3			AC023025	126654951		131560	3719	2913	138192
S/G/Y/R/B/O	NT_005588	AC133681	126991994	3	chr3	NT_005588	AC134027	127104991	3	94555	0	0	94555
S/G/Y/R/B/O	NT_005588	AC134027	127104991	3

NT_037579

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037579	AC080133	127159736	1	chr3	NT_037579	AC016968	127268108	3	0	0	0	0
S/G/Y/R/B/O	NT_037579	AC016968	127268108	3	chr3	NT_037579	AC084035	127420694	1	2646	0	76541	79187
S/G/Y/R/B/O	NT_037579	AC084035	127420694	1	chr3	NT_037579	AC023593	127469177	3	64237	0	0	64237
S/G/Y/R/B/O	NT_037579	AC084035	127420694	1			AC012406	127420694		49848	4847	6204	60899
S/G/Y/R/B/O	NT_037579	AC023593	127469177	3	chr3	NT_037579	AC073357	127658934	1	69784	0	0	69784
S/G/Y/R/B/O	NT_037579	AC023593	127469177	3			AC012406	127469177		97234	2670	18654	118558
S/G/Y/R/B/O	NT_037579	AC023593	127469177	3			AC073020	127469177		13880	6429	10902	31211
S/G/Y/R/B/O	NT_037579	AC073357	127658934	1
S/G/Y/R/B/O	NT_037579	AC073357	127658934	1			AC012406	127420694		27005	0	1036	28041
S/G/Y/R/B/O	NT_037579	AC073357	127658934	1			AC073020	127469177		25761	16265	23886	65912

NT_037580

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037580	AC117480	127764394	3

NT_022513

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022513	AC011311	127795055	3	chr3	NT_022513	AC069419	127982683	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022513	AC069419	127982683	3	chr3	NT_022513	AL449214	128042093	2	0	0	0	0
S/G/Y/R/B/O	NT_022513	AL449214	128042093	2	chr3	NT_022513	AC112642	128053467	3	50125	1746	0	51871
S/G/Y/R/B/O	NT_022513	AL449214	128042093	2			AC084784	127795055		50055	1746	0	51801
S/G/Y/R/B/O	NT_022513	AL449214	128042093	2			AL449217	128053467		24935	0	0	24935
S/G/Y/R/B/O	NT_022513	AC112642	128053467	3	chr3	NT_022513	AF196968	128219120	3	20693	0	0	20693
S/G/Y/R/B/O	NT_022513	AC112642	128053467	3			AL449210	128219120		59934	0	0	59934
S/G/Y/R/B/O	NT_022513	AC112642	128053467	3			AL449217	128042093		129511	0	0	129511
S/G/Y/R/B/O	NT_022513	AF196968	128219120	3	chr3	NT_022513	AC092549	128254584	3	68173	0	0	68173
S/G/Y/R/B/O	NT_022513	AF196968	128219120	3			AC084784	128042093		39895	0	0	39895
S/G/Y/R/B/O	NT_022513	AF196968	128219120	3			AF301236	128053467		45848	0	0	45848
S/G/Y/R/B/O	NT_022513	AF196968	128219120	3			AL449210	128053467		102731	0	0	102731
S/G/Y/R/B/O	NT_022513	AC092549	128254584	3	chr3	NT_022513	AC080005	128350494	3	2001	0	0	2001
S/G/Y/R/B/O	NT_022513	AC092549	128254584	3			AF301236	128219120		55550	1502	14646	71698
S/G/Y/R/B/O	NT_022513	AC092549	128254584	3			AL449210	128219120		84554	0	8819	93373
S/G/Y/R/B/O	NT_022513	AC080005	128350494	3	chr3	NT_022513	AC079945	128518072	3	0	2003	0	2003
S/G/Y/R/B/O	NT_022513	AC080005	128350494	3			AF301236	128254584		27611	0	12498	40109
S/G/Y/R/B/O	NT_022513	AC079945	128518072	3
S/G/Y/R/B/O	NT_022513	AC079945	128518072	3	chr3	NT_033014	AL449215	128749969	3	99929	0	0	99929

NT_033014

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_033014	AC117508	128675317	1	chr3	NT_033014	AC023598	128723033	1	45087	0	1090	46177
S/G/Y/R/B/O	NT_033014	AC117508	128675317	1	chr3	NT_033014	AC112484	128955364	3	30740	1126	0	31866
S/G/Y/R/B/O	NT_033014	AC117508	128675317	1	chr3	NT_033014	AL449215	128749969	3	12412	0	0	12412
S/G/Y/R/B/O	NT_033014	AC117508	128675317	1			AC022993	128749969		33443	0	40826	74269
S/G/Y/R/B/O	NT_033014	AC023598	128723033	1	chr3	NT_033014	AL449215	128749969	3	0	0	0	0
S/G/Y/R/B/O	NT_033014	AC023598	128723033	1	chr3	NT_033014	AC112484	128955364	3	31139	0	1157	32296
S/G/Y/R/B/O	NT_033014	AC023598	128723033	1			AC022993	128749969		56014	0	12887	68901
S/G/Y/R/B/O	NT_033014	AL449215	128749969	3	chr3	NT_033014	AC112484	128955364	3	0	0	0	0
S/G/Y/R/B/O	NT_033014	AL449215	128749969	3	chr3	NT_022513	AC079945	128518072	3	99929	0	0	99929
S/G/Y/R/B/O	NT_033014	AL449215	128749969	3	chr3	NT_033014	AC117508	128675317	1	12412	0	0	12412
S/G/Y/R/B/O	NT_033014	AC112484	128955364	3	chr3	NT_033014	AC108673	129140834	3	2103	0	0	2103
S/G/Y/R/B/O	NT_033014	AC112484	128955364	3	chr3	NT_033014	AC023598	128723033	1	31139	0	1157	32296
S/G/Y/R/B/O	NT_033014	AC112484	128955364	3	chr3	NT_033014	AC117508	128675317	1	30740	1126	0	31866
S/G/Y/R/B/O	NT_033014	AC112484	128955364	3			AC022993	129286098		107085	0	23119	130204
S/G/Y/R/B/O	NT_033014	AC108673	129140834	3	chr3	NT_033014	AC135587	129275759	1	9339	833	29807	39979
S/G/Y/R/B/O	NT_033014	AC108673	129140834	3	chr3	NT_033014	AC022944	129286098	1	34905	12724	27057	74686
S/G/Y/R/B/O	NT_033014	AC108673	129140834	3	chr3	NT_033014	AC022944	129286098	1	34905	12724	27057	74686
S/G/Y/R/B/O	NT_033014	AC135587	129275759	1	chr3	NT_033014	AC022944	129286098	1	18475	9195	14324	41994
S/G/Y/R/B/O	NT_033014	AC022944	129286098	1
S/G/Y/R/B/O	NT_033014	AC022944	129286098	1	chr3	NT_033014	AC108673	129140834	3	34905	12724	27057	74686
S/G/Y/R/B/O	NT_033014	AC022944	129286098	1	chr3	NT_033014	AC108673	129140834	3	34905	12724	27057	74686

NT_006025

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_006025	AL449212	129735376	3	chr3	NT_006025	AC080007	129753647	3	0	0	48896	48896
S/G/Y/R/B/O	NT_006025	AC080007	129753647	3	chr3	NT_006025	AL449213	129922198	2	11246	0	0	11246
S/G/Y/R/B/O	NT_006025	AC080007	129753647	3			AC023162	129753647		65941	0	0	65941
S/G/Y/R/B/O	NT_006025	AL449213	129922198	2	chr3	NT_006025	AC117492	130006476	1	2801	0	0	2801
S/G/Y/R/B/O	NT_006025	AL449213	129922198	2			AC000380	129922198		111218	0	0	111218
S/G/Y/R/B/O	NT_006025	AL449213	129922198	2			AC000380	129922198		111218	0	0	111218
S/G/Y/R/B/O	NT_006025	AL449213	129922198	2			AC023162	129922198		51107	0	0	51107
S/G/Y/R/B/O	NT_006025	AL449213	129922198	2			AC025421	129922198		13517	7733	14688	35938
S/G/Y/R/B/O	NT_006025	AC117492	130006476	1	chr3	NT_006025	AL449209	130145281	3	0	0	0	0
S/G/Y/R/B/O	NT_006025	AC117492	130006476	1			AC055870	130006476		12259	2728	0	14987
S/G/Y/R/B/O	NT_006025	AL449209	130145281	3	chr3	NT_006025	AC055727	130265889	3	0	1998	0	1998
S/G/Y/R/B/O	NT_006025	AL449209	130145281	3			AC055870	130265889		24503	11649	4918	41070
S/G/Y/R/B/O	NT_006025	AL449209	130145281	3			AC083799	130265889		75866	0	0	75866
S/G/Y/R/B/O	NT_006025	AC055727	130265889	3	chr3	NT_006025	AC083906	130292991	3	0	1998	0	1998
S/G/Y/R/B/O	NT_006025	AC055727	130265889	3			AC055870	130265889		28635	0	0	28635
S/G/Y/R/B/O	NT_006025	AC055727	130265889	3			AC055870	130265889		28635	0	0	28635
S/G/Y/R/B/O	NT_006025	AC083906	130292991	3	chr3	NT_006025	AC130888	130460866	3	2046	0	0	2046
S/G/Y/R/B/O	NT_006025	AC083906	130292991	3			AC016095	130145281		18698	4774	27548	51020
S/G/Y/R/B/O	NT_006025	AC083906	130292991	3			AC022945	130145281		26291	8895	3509	38695
S/G/Y/R/B/O	NT_006025	AC083906	130292991	3			AC055870	130265889		46513	2746	3707	52966
S/G/Y/R/B/O	NT_006025	AC083906	130292991	3			AC108705	130265889		21564	0	17737	39301
S/G/Y/R/B/O	NT_006025	AC083906	130292991	3			AC108707	130265889		28256	0	21765	50021
S/G/Y/R/B/O	NT_006025	AC083906	130292991	3			AF165423	130460866		88788	0	0	88788
S/G/Y/R/B/O	NT_006025	AC130888	130460866	3	chr3	NT_006025	AC112646	130573507	3	0	1713	0	1713
S/G/Y/R/B/O	NT_006025	AC130888	130460866	3			AC016095	130460866		50217	9051	7107	66375
S/G/Y/R/B/O	NT_006025	AC130888	130460866	3			AC022945	130460866		27802	2830	3306	33938
S/G/Y/R/B/O	NT_006025	AC130888	130460866	3			AC108705	130292991		67826	0	0	67826
S/G/Y/R/B/O	NT_006025	AC130888	130460866	3			AC108707	130292991		45196	0	1992	47188
S/G/Y/R/B/O	NT_006025	AC112646	130573507	3	chr3	NT_006025	AC093004	130610067	3	2006	0	0	2006
S/G/Y/R/B/O	NT_006025	AC112646	130573507	3			AC108705	130610067		11274	0	0	11274
S/G/Y/R/B/O	NT_006025	AC093004	130610067	3	chr3	NT_006025	AC117398	130767192	3	2000	0	0	2000
S/G/Y/R/B/O	NT_006025	AC093004	130610067	3			AC019061	130460866		69977	0	21122	91099
S/G/Y/R/B/O	NT_006025	AC117398	130767192	3

NT_005823

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005823	AC093006	130884374	3	chr3	NT_005823	AC128683	131097947	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005823	AC093006	130884374	3			AC023438	130610067		21430	2624	0	24054
S/G/Y/R/B/O	NT_005823	AC128683	131097947	3	chr3	NT_005823	AC097105	131178617	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005823	AC128683	131097947	3			AC023438	131097947		57344	0	19693	77037
S/G/Y/R/B/O	NT_005823	AC128683	131097947	3			AC117380	131178617		16837	0	0	16837
S/G/Y/R/B/O	NT_005823	AC097105	131178617	3	chr3	NT_005823	AL136504	131271741	3	16368	0	0	16368
S/G/Y/R/B/O	NT_005823	AC097105	131178617	3			AC023438	131178617		10029	0	0	10029
S/G/Y/R/B/O	NT_005823	AL136504	131271741	3	chr3	NT_005823	AC055733	131285728	3	170132	0	0	170132
S/G/Y/R/B/O	NT_005823	AL136504	131271741	3			AC025148	131271741		48901	1827	0	50728
S/G/Y/R/B/O	NT_005823	AL136504	131271741	3			AC069092	131285728		52187	6745	0	58932
S/G/Y/R/B/O	NT_005823	AC055733	131285728	3	chr3	NT_005823	AC116424	131479153	3	0	0	0	0
S/G/Y/R/B/O	NT_005823	AC055733	131285728	3			AC025148	131178617		40297	1827	0	42124
S/G/Y/R/B/O	NT_005823	AC055733	131285728	3			AC069092	131178617		48440	4511	0	52951
S/G/Y/R/B/O	NT_005823	AC116424	131479153	3
S/G/Y/R/B/O	NT_005823	AC116424	131479153	3			AC025148	131271741		22761	0	16108	38869

NT_037581

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037581	AC121332	131547540	3	chr3	NT_037581	AC083908	131575890	3	0	0	1754	1754
S/G/Y/R/B/O	NT_037581	AC083908	131575890	3	chr3	NT_037581	AC010210	131685428	3	2004	0	0	2004
S/G/Y/R/B/O	NT_037581	AC010210	131685428	3	chr3	NT_037581	AC108732	131836247	3	2004	0	0	2004
S/G/Y/R/B/O	NT_037581	AC108732	131836247	3

NT_022393

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022393	AC136276	131870634	1	chr3	NT_022393	AC107027	131871434	3	0	0	0	0
S/G/Y/R/B/O	NT_022393	AC136276	131870634	1	chr3	NT_022393	AC055754	132190572	3	28486	0	0	28486
S/G/Y/R/B/O	NT_022393	AC136276	131870634	1	chr3	NT_022393	AC135002	132042996	3	28378	0	37588	65966
S/G/Y/R/B/O	NT_022393	AC136276	131870634	1	chr3	NT_022393	AC135002	132042996	3	28378	0	37588	65966
S/G/Y/R/B/O	NT_022393	AC107027	131871434	3	chr3	NT_022393	AC135002	132042996	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022393	AC107027	131871434	3			AC023757	132042996		116434	4493	7483	128410
S/G/Y/R/B/O	NT_022393	AC135002	132042996	3	chr3	NT_022393	AC055754	132190572	3	0	0	0	0
S/G/Y/R/B/O	NT_022393	AC135002	132042996	3	chr3	NT_022393	AC136276	131870634	1	28378	0	37588	65966
S/G/Y/R/B/O	NT_022393	AC135002	132042996	3	chr3	NT_022393	AC136276	131870634	1	28378	0	37588	65966
S/G/Y/R/B/O	NT_022393	AC055754	132190572	3	chr3	NT_022393	AC021659	132347926	3	0	0	1606	1606
S/G/Y/R/B/O	NT_022393	AC055754	132190572	3	chr3	NT_022393	AC136276	131870634	1	28486	0	0	28486
S/G/Y/R/B/O	NT_022393	AC021659	132347926	3	chr3	NT_022393	AC076961	132447717	3	2093	0	0	2093
S/G/Y/R/B/O	NT_022393	AC076961	132447717	3	chr3	NT_022393	AC117409	132504265	3	2046	0	0	2046
S/G/Y/R/B/O	NT_022393	AC117409	132504265	3	chr3	NT_022393	AC073021	132580168	3	0	0	0	0
S/G/Y/R/B/O	NT_022393	AC117409	132504265	3			AC055750	132504265		43506	0	0	43506
S/G/Y/R/B/O	NT_022393	AC117409	132504265	3			AC117423	132447717		22901	14730	0	37631
S/G/Y/R/B/O	NT_022393	AC117409	132504265	3			AL592209	132447717		153963	0	0	153963
S/G/Y/R/B/O	NT_022393	AC073021	132580168	3	chr3	NT_022393	AC020633	132763323	3	0	0	0	0
S/G/Y/R/B/O	NT_022393	AC073021	132580168	3			AC027463	132447717		48352	2757	35954	87063
S/G/Y/R/B/O	NT_022393	AC073021	132580168	3			AC055750	132447717		21167	0	58844	80011
S/G/Y/R/B/O	NT_022393	AC073021	132580168	3			AC068983	132447717		27046	5618	109322	141986
S/G/Y/R/B/O	NT_022393	AC073021	132580168	3			AC117423	132447717		11496	10133	0	21629
S/G/Y/R/B/O	NT_022393	AC020633	132763323	3	chr3	NT_022393	AC026374	132909574	3	0	1994	0	1994
S/G/Y/R/B/O	NT_022393	AC020633	132763323	3			AC027463	132909574		39057	0	6848	45905
S/G/Y/R/B/O	NT_022393	AC020633	132763323	3			AL359635	132909574		96284	9453	0	105737
S/G/Y/R/B/O	NT_022393	AC026374	132909574	3	chr3	NT_022393	AC020632	132982965	3	0	0	1621	1621
S/G/Y/R/B/O	NT_022393	AC020632	132982965	3	chr3	NT_022393	AC055732	133142990	3	2209	0	0	2209
S/G/Y/R/B/O	NT_022393	AC055732	133142990	3	chr3	NT_022393	AC018916	133317223	3	0	0	0	0
S/G/Y/R/B/O	NT_022393	AC055732	133142990	3			AC022275	132982965		14911	1871	15088	31870
S/G/Y/R/B/O	NT_022393	AC018916	133317223	3	chr3	NT_022393	AC079942	133332813	3	2001	0	0	2001
S/G/Y/R/B/O	NT_022393	AC079942	133332813	3	chr3	NT_022393	AC092984	133502644	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022393	AC092984	133502644	3	chr3	NT_022393	AC018472	133617475	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022393	AC018472	133617475	3	chr3	NT_022393	AC055753	133714650	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022393	AC055753	133714650	3	chr3	NT_022393	AC022296	133882312	3	0	0	1664	1664
S/G/Y/R/B/O	NT_022393	AC055753	133714650	3			AC076965	133882312		35481	2298	20281	58060
S/G/Y/R/B/O	NT_022393	AC022296	133882312	3	chr3	NT_022393	AC016255	134033957	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022393	AC022296	133882312	3			AC076965	133714650		18314	0	14212	32526
S/G/Y/R/B/O	NT_022393	AC016255	134033957	3	chr3	NT_022393	AC083905	134114061	3	0	2002	0	2002
S/G/Y/R/B/O	NT_022393	AC083905	134114061	3	chr3	NT_022393	AC080128	134221528	3	2003	0	0	2003
S/G/Y/R/B/O	NT_022393	AC080128	134221528	3	chr3	NT_022393	AC117475	134402769	3	0	1940	0	1940
S/G/Y/R/B/O	NT_022393	AC080128	134221528	3			AC073361	134221528		64918	2166	41054	108138
S/G/Y/R/B/O	NT_022393	AC117475	134402769	3	chr3	NT_022393	AC108742	134517828	3	2991	0	0	2991
S/G/Y/R/B/O	NT_022393	AC108742	134517828	3	chr3	NT_022393	AC107310	134630116	3	0	0	1686	1686
S/G/Y/R/B/O	NT_022393	AC107310	134630116	3
S/G/Y/R/B/O	NT_022393	AC107310	134630116	3			AC108728	134675034		26132	0	11345	37477
S/G/Y/R/B/O	NT_022393	AC107310	134630116	3			AC108728	134675034		26132	0	11345	37477

NT_005824

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005824	AC096967	134675034	3
S/G/Y/R/B/O	NT_005824	AC096967	134675034	3			AC108728	134630116		32021	0	8298	40319

NT_037582

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037582	AC026117	134806285	3

NT_037583

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037583	AC010207	134824968	3

NT_034552

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034552	AC109912	135019550	3	chr3	NT_034552	AC016931	135105664	3	2004	0	0	2004
S/G/Y/R/B/O	NT_034552	AC109912	135019550	3			AC073157	135105664		15192	4639	26458	46289
S/G/Y/R/B/O	NT_034552	AC016931	135105664	3	chr3	NT_034552	AC063918	135272692	3	2226	0	0	2226
S/G/Y/R/B/O	NT_034552	AC063918	135272692	3	chr3	NT_034552	AC016951	135365287	3	2177	0	0	2177
S/G/Y/R/B/O	NT_034552	AC016951	135365287	3	chr3	NT_034552	AC073244	135513216	3	75324	0	0	75324
S/G/Y/R/B/O	NT_034552	AC016951	135365287	3	chr3	NT_034552	AC021051	135547701	1	75033	0	44508	119541
S/G/Y/R/B/O	NT_034552	AC073244	135513216	3	chr3	NT_034552	AC021051	135547701	1	0	0	19057	19057
S/G/Y/R/B/O	NT_034552	AC021051	135547701	1
S/G/Y/R/B/O	NT_034552	AC021051	135547701	1	chr3	NT_034552	AC016951	135365287	3	75033	0	44508	119541

NT_025663

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_025663	AC092969	135603350	3	chr3	NT_025663	AC128682	135784123	3	2004	0	0	2004
S/G/Y/R/B/O	NT_025663	AC092969	135603350	3			AC016419	135513216		35978	1625	0	37603
S/G/Y/R/B/O	NT_025663	AC092969	135603350	3			AC026606	135513216		94134	14996	29815	138945
S/G/Y/R/B/O	NT_025663	AC092969	135603350	3			AC073567	135513216		19152	0	1266	20418
S/G/Y/R/B/O	NT_025663	AC128682	135784123	3	chr3	NT_025663	AC128689	135785755	3	0	0	0	0
S/G/Y/R/B/O	NT_025663	AC128682	135784123	3			AC015539	135784123		16841	8618	15009	40468
S/G/Y/R/B/O	NT_025663	AC128682	135784123	3			AC073567	135784123		41145	0	157	41302
S/G/Y/R/B/O	NT_025663	AC128689	135785755	3	chr3	NT_025663	AC092980	135912073	3	0	0	0	0
S/G/Y/R/B/O	NT_025663	AC128689	135785755	3			AC015539	135603350		60034	2739	51201	113974
S/G/Y/R/B/O	NT_025663	AC128689	135785755	3			AC016419	135603350		13384	2997	0	16381
S/G/Y/R/B/O	NT_025663	AC128689	135785755	3			AC073567	135603350		70185	0	1127	71312
S/G/Y/R/B/O	NT_025663	AC092980	135912073	3	chr3	NT_025663	AC016919	136044176	3	2004	0	0	2004
S/G/Y/R/B/O	NT_025663	AC092980	135912073	3			AC026832	136044176		104431	1772	15855	122058
S/G/Y/R/B/O	NT_025663	AC092980	135912073	3			AC073567	136044176		26710	0	0	26710
S/G/Y/R/B/O	NT_025663	AC016919	136044176	3	chr3	NT_025663	AC132005	136209890	3	0	1999	0	1999
S/G/Y/R/B/O	NT_025663	AC016919	136044176	3			AC026832	136044176		19331	3695	232	23258
S/G/Y/R/B/O	NT_025663	AC132005	136209890	3

NT_034554

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034554	AC092989	136233255	3
S/G/Y/R/B/O	NT_034554	AC092989	136233255	3			AC068444	136044176		34244	7941	26248	68433

NT_005567

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005567	AC072039	136411747	3	chr3	NT_005567	AC092991	136564707	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005567	AC092991	136564707	3	chr3	NT_005567	AC069524	136713433	3	0	2000	0	2000
S/G/Y/R/B/O	NT_005567	AC092991	136564707	3			AC026969	136564707		49664	5716	18410	73790
S/G/Y/R/B/O	NT_005567	AC069524	136713433	3	chr3	NT_005567	AC107425	136875239	3	2012	0	0	2012
S/G/Y/R/B/O	NT_005567	AC069524	136713433	3			AC017107	136411747		84661	0	1635	86296
S/G/Y/R/B/O	NT_005567	AC069524	136713433	3			AC022799	136411747		11587	9563	3136	24286
S/G/Y/R/B/O	NT_005567	AC069524	136713433	3			AC027089	136411747		27044	6968	2823	36835
S/G/Y/R/B/O	NT_005567	AC069524	136713433	3			AC027294	136411747		22393	0	22552	44945
S/G/Y/R/B/O	NT_005567	AC069524	136713433	3			AC069238	136411747		50158	4526	30832	85516
S/G/Y/R/B/O	NT_005567	AC069524	136713433	3			AC072040	136411747		15051	0	22878	37929
S/G/Y/R/B/O	NT_005567	AC107425	136875239	3	chr3	NT_005567	AC128712	137003524	3	0	0	0	0
S/G/Y/R/B/O	NT_005567	AC107425	136875239	3			AC022799	136875239		63081	17441	5167	85689
S/G/Y/R/B/O	NT_005567	AC107425	136875239	3			AC027089	136875239		91554	4393	7311	103258
S/G/Y/R/B/O	NT_005567	AC128712	137003524	3	chr3	NT_005567	AC069514	137115624	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005567	AC128712	137003524	3			AC112921	137115624		44727	0	13679	58406
S/G/Y/R/B/O	NT_005567	AC069514	137115624	3	chr3	NT_005567	AC117382	137156371	3	0	0	0	0
S/G/Y/R/B/O	NT_005567	AC117382	137156371	3	chr3	NT_005567	AC096992	137258093	3	0	2000	0	2000
S/G/Y/R/B/O	NT_005567	AC117382	137156371	3			AC074266	137003524		11929	0	4738	16667
S/G/Y/R/B/O	NT_005567	AC096992	137258093	3	chr3	NT_005567	AC011597	137309059	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005567	AC096992	137258093	3			AC067726	137309059		13162	2067	5828	21057
S/G/Y/R/B/O	NT_005567	AC011597	137309059	3	chr3	NT_005567	AC097313	137497128	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005567	AC011597	137309059	3			AC023402	137156371		20025	3121	4137	27283
S/G/Y/R/B/O	NT_005567	AC011597	137309059	3			AC067726	137156371		73041	0	10566	83607
S/G/Y/R/B/O	NT_005567	AC011597	137309059	3			AC074266	137156371		24165	0	6160	30325
S/G/Y/R/B/O	NT_005567	AC097313	137497128	3	chr3	NT_005567	AC117385	137505588	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005567	AC097313	137497128	3			AC023402	137309059		10283	0	174	10457
S/G/Y/R/B/O	NT_005567	AC117385	137505588	3	chr3	NT_005567	AC117388	137671770	3	15737	0	0	15737
S/G/Y/R/B/O	NT_005567	AC117385	137505588	3			AC023402	137505588		42112	9062	12160	63334
S/G/Y/R/B/O	NT_005567	AC117385	137505588	3			AC027382	137505588		15522	0	0	15522
S/G/Y/R/B/O	NT_005567	AC117385	137505588	3			AC084230	137505588		21488	0	0	21488
S/G/Y/R/B/O	NT_005567	AC117385	137505588	3			AC121331	137671770		15545	0	0	15545
S/G/Y/R/B/O	NT_005567	AC117388	137671770	3	chr3	NT_005567	AC022077	137709811	3	2025	0	0	2025
S/G/Y/R/B/O	NT_005567	AC117388	137671770	3			AC027382	137709811		46807	2787	2147	51741
S/G/Y/R/B/O	NT_005567	AC117388	137671770	3			AC084230	137709811		53514	0	0	53514
S/G/Y/R/B/O	NT_005567	AC117388	137671770	3			AC121331	137505588		47062	0	5532	52594
S/G/Y/R/B/O	NT_005567	AC022077	137709811	3	chr3	NT_005567	AC117483	137866062	1	10465	0	0	10465
S/G/Y/R/B/O	NT_005567	AC022077	137709811	3			AC027382	137505588		53152	6994	8130	68276
S/G/Y/R/B/O	NT_005567	AC022077	137709811	3			AC084230	137505588		65469	0	1156	66625
S/G/Y/R/B/O	NT_005567	AC022077	137709811	3			AC121331	137866062		57321	0	10323	67644
S/G/Y/R/B/O	NT_005567	AC117483	137866062	1	chr3	NT_005567	AC117440	137917958	3	31343	4663	0	36006
S/G/Y/R/B/O	NT_005567	AC117440	137917958	3	chr3	NT_005567	AC117399	138117344	3	0	1536	0	1536
S/G/Y/R/B/O	NT_005567	AC117399	138117344	3	chr3	NT_005567	AC007159	138209808	3	7784	0	0	7784
S/G/Y/R/B/O	NT_005567	AC117399	138117344	3			AC015652	138209808		11286	0	0	11286
S/G/Y/R/B/O	NT_005567	AC007159	138209808	3	chr3	NT_005567	AC117478	138357045	3	28758	0	0	28758
S/G/Y/R/B/O	NT_005567	AC007159	138209808	3			AC015652	137917958		57809	0	0	57809
S/G/Y/R/B/O	NT_005567	AC007159	138209808	3			AC020788	137917958		31726	0	86576	118302
S/G/Y/R/B/O	NT_005567	AC007159	138209808	3			AC130421	138357045		104086	0	35916	140002
S/G/Y/R/B/O	NT_005567	AC117478	138357045	3	chr3	NT_005567	AC016252	138405441	3	2061	0	0	2061
S/G/Y/R/B/O	NT_005567	AC117478	138357045	3			AC015652	138209808		14470	0	0	14470
S/G/Y/R/B/O	NT_005567	AC117478	138357045	3			AC130421	138405441		14464	0	0	14464
S/G/Y/R/B/O	NT_005567	AC016252	138405441	3	chr3	NT_005567	AC023049	138568333	3	0	0	1831	1831
S/G/Y/R/B/O	NT_005567	AC016252	138405441	3			AC010810	138405441		45368	0	16473	61841
S/G/Y/R/B/O	NT_005567	AC016252	138405441	3			AC084436	138568333		24147	4005	0	28152
S/G/Y/R/B/O	NT_005567	AC023049	138568333	3	chr3	NT_005567	AC068777	138682226	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005567	AC023049	138568333	3			AC022738	138405441		91172	4595	0	95767
S/G/Y/R/B/O	NT_005567	AC023049	138568333	3			AC084436	138682226		70191	21276	8595	100062
S/G/Y/R/B/O	NT_005567	AC068777	138682226	3	chr3	NT_005567	AC022337	138776396	3	2023	0	0	2023
S/G/Y/R/B/O	NT_005567	AC068777	138682226	3			AC022738	138776396		40156	0	0	40156
S/G/Y/R/B/O	NT_005567	AC068777	138682226	3			AC084436	138568333		12648	0	24680	37328
S/G/Y/R/B/O	NT_005567	AC022337	138776396	3	chr3	NT_005567	AC022497	138859521	3	0	0	1641	1641
S/G/Y/R/B/O	NT_005567	AC022497	138859521	3

NT_025664

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_025664	AC072045	139015336	3	chr3	NT_025664	AC020890	139072334	3	0	0	0	0
S/G/Y/R/B/O	NT_025664	AC020890	139072334	3	chr3	NT_025664	AC117389	139207217	3	2004	0	0	2004
S/G/Y/R/B/O	NT_025664	AC020890	139072334	3			AC018357	138776396		14391	0	8259	22650
S/G/Y/R/B/O	NT_025664	AC117389	139207217	3	chr3	NT_025664	AC067728	139314294	3	0	0	1915	1915
S/G/Y/R/B/O	NT_025664	AC117389	139207217	3			AC018357	139207217		58916	2488	17353	78757
S/G/Y/R/B/O	NT_025664	AC067728	139314294	3	chr3	NT_025664	AC092947	139373088	1	0	0	27957	27957
S/G/Y/R/B/O	NT_025664	AC092947	139373088	1	chr3	NT_025664	AC044901	139542501	1	6859	5128	13722	25709
S/G/Y/R/B/O	NT_025664	AC092947	139373088	1			AC027714	139207217		13604	415	17623	31642
S/G/Y/R/B/O	NT_025664	AC044901	139542501	1	chr3	NT_025664	AC130416	139565836	3	18115	0	8033	26148
S/G/Y/R/B/O	NT_025664	AC044901	139542501	1	chr3	NT_025664	AC069059	139730629	1	26028	0	5196	31224
S/G/Y/R/B/O	NT_025664	AC044901	139542501	1	chr3	NT_025664	AC069525	139597409	3	21983	0	10688	32671
S/G/Y/R/B/O	NT_025664	AC044901	139542501	1	chr3	NT_025664	AC069525	139597409	3	21983	0	10688	32671
S/G/Y/R/B/O	NT_025664	AC044901	139542501	1			AC027714	139565836		36523	23707	19043	79273
S/G/Y/R/B/O	NT_025664	AC044901	139542501	1			AC107420	139373088		35981	5839	34551	76371
S/G/Y/R/B/O	NT_025664	AC044901	139542501	1			AC108692	139373088		26343	0	6167	32510
S/G/Y/R/B/O	NT_025664	AC130416	139565836	3	chr3	NT_025664	AC069525	139597409	3	0	0	1834	1834
S/G/Y/R/B/O	NT_025664	AC069525	139597409	3	chr3	NT_025664	AC069059	139730629	1	46384	0	0	46384
S/G/Y/R/B/O	NT_025664	AC069525	139597409	3	chr3	NT_025664	AC044901	139542501	1	21983	0	10688	32671
S/G/Y/R/B/O	NT_025664	AC069525	139597409	3	chr3	NT_025664	AC044901	139542501	1	21983	0	10688	32671
S/G/Y/R/B/O	NT_025664	AC069525	139597409	3			AC027714	139373088		21947	20233	3372	45552
S/G/Y/R/B/O	NT_025664	AC069525	139597409	3			AC027714	139373088		21947	20233	3372	45552
S/G/Y/R/B/O	NT_025664	AC069059	139730629	1	chr3	NT_025664	AC119740	139760274	3	0	0	3180	3180
S/G/Y/R/B/O	NT_025664	AC069059	139730629	1	chr3	NT_025664	AC044901	139542501	1	26028	0	5196	31224
S/G/Y/R/B/O	NT_025664	AC069059	139730629	1			AC027714	139565836		33591	9197	3375	46163
S/G/Y/R/B/O	NT_025664	AC069059	139730629	1			AC107420	139597409		31223	0	11403	42626
S/G/Y/R/B/O	NT_025664	AC069059	139730629	1			AC108692	139597409		47439	2290	0	49729
S/G/Y/R/B/O	NT_025664	AC119740	139760274	3	chr3	NT_025664	AC024933	139864692	3	0	2003	0	2003
S/G/Y/R/B/O	NT_025664	AC024933	139864692	3

NT_005832

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005832	AC097103	139971036	3	chr3	NT_005832	AC046134	140058036	3	0	1997	0	1997
S/G/Y/R/B/O	NT_005832	AC097103	139971036	3			AC013379	139760274		40856	0	18363	59219
S/G/Y/R/B/O	NT_005832	AC097103	139971036	3			AC025890	139760274		17614	0	0	17614
S/G/Y/R/B/O	NT_005832	AC046134	140058036	3	chr3	NT_005832	AC110716	140224985	3	0	1971	0	1971
S/G/Y/R/B/O	NT_005832	AC046134	140058036	3			AC025890	140058036		89432	0	0	89432
S/G/Y/R/B/O	NT_005832	AC110716	140224985	3	chr3	NT_005832	AC016933	140288944	3	0	0	0	0
S/G/Y/R/B/O	NT_005832	AC016933	140288944	3	chr3	NT_005832	AC117390	140442707	3	0	0	1854	1854
S/G/Y/R/B/O	NT_005832	AC117390	140442707	3	chr3	NT_005832	AC108744	140609695	3	0	0	64881	64881
S/G/Y/R/B/O	NT_005832	AC108744	140609695	3	chr3	NT_005832	AC117396	140611696	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005832	AC117396	140611696	3	chr3	NT_005832	AC117449	140756794	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005832	AC117449	140756794	3	chr3	NT_005832	AC092988	140832101	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005832	AC092988	140832101	3	chr3	NT_005832	AC010181	140986625	3	0	1944	0	1944
S/G/Y/R/B/O	NT_005832	AC092988	140832101	3	chr3	NT_005832	AC130256	141011672	2	34989	0	0	34989
S/G/Y/R/B/O	NT_005832	AC092988	140832101	3			AC022479	140986625		156525	0	0	156525
S/G/Y/R/B/O	NT_005832	AC010181	140986625	3	chr3	NT_005832	AC130256	141011672	2	26937	0	0	26937
S/G/Y/R/B/O	NT_005832	AC130256	141011672	2	chr3	NT_005832	AC048346	141012084	3	85694	0	0	85694
S/G/Y/R/B/O	NT_005832	AC130256	141011672	2	chr3	NT_005832	AC092988	140832101	3	34989	0	0	34989
S/G/Y/R/B/O	NT_005832	AC130256	141011672	2			AC022479	140986625		34992	0	0	34992
S/G/Y/R/B/O	NT_005832	AC048346	141012084	3	chr3	NT_005832	AC026324	141177628	3	0	0	1710	1710
S/G/Y/R/B/O	NT_005832	AC048346	141012084	3			AC015493	140832101		58432	0	2458	60890
S/G/Y/R/B/O	NT_005832	AC048346	141012084	3			AC025421	140832101		10652	0	6587	17239
S/G/Y/R/B/O	NT_005832	AC026324	141177628	3	chr3	NT_005832	AC121333	141273201	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005832	AC026324	141177628	3			AC015493	141011672		12400	0	41895	54295
S/G/Y/R/B/O	NT_005832	AC026324	141177628	3			AC129030	141273201		34729	2661	2417	39807
S/G/Y/R/B/O	NT_005832	AC121333	141273201	3	chr3	NT_005832	AC132032	141415579	3	0	0	0	0
S/G/Y/R/B/O	NT_005832	AC121333	141273201	3			AC015493	141273201		13627	0	0	13627
S/G/Y/R/B/O	NT_005832	AC121333	141273201	3			AC129030	141177628		25877	0	0	25877
S/G/Y/R/B/O	NT_005832	AC132032	141415579	3	chr3	NT_005832	AC108727	141520517	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005832	AC108727	141520517	3	chr3	NT_005832	AC022215	141674410	3	21885	0	0	21885
S/G/Y/R/B/O	NT_005832	AC108727	141520517	3			AC009896	141520517		78172	0	14323	92495
S/G/Y/R/B/O	NT_005832	AC022215	141674410	3	chr3	NT_005832	AC117383	141832592	3	0	0	0	0
S/G/Y/R/B/O	NT_005832	AC022215	141674410	3			AC009896	141415579		20135	0	1218	21353
S/G/Y/R/B/O	NT_005832	AC117383	141832592	3	chr3	NT_005832	AC010184	141898869	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005832	AC010184	141898869	3	chr3	NT_005832	AC092977	142087444	3	2006	0	0	2006
S/G/Y/R/B/O	NT_005832	AC010184	141898869	3			AC025108	141898869		46272	2372	0	48644
S/G/Y/R/B/O	NT_005832	AC092977	142087444	3	chr3	NT_005832	AC092978	142206596	3	2227	0	0	2227
S/G/Y/R/B/O	NT_005832	AC092977	142087444	3			AC025108	141898869		77243	0	6147	83390
S/G/Y/R/B/O	NT_005832	AC092978	142206596	3	chr3	NT_005832	AC112771	142260473	3	0	0	1770	1770
S/G/Y/R/B/O	NT_005832	AC112771	142260473	3	chr3	NT_005832	AC112504	142294107	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005832	AC112771	142260473	3			AC068693	142260473		23116	3623	0	26739
S/G/Y/R/B/O	NT_005832	AC112504	142294107	3	chr3	NT_005832	AC128648	142509184	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005832	AC112504	142294107	3			AC010934	142294107		27878	1780	14066	43724
S/G/Y/R/B/O	NT_005832	AC112504	142294107	3			AC044879	142294107		33709	1547	4337	39593
S/G/Y/R/B/O	NT_005832	AC112504	142294107	3			AC068693	142294107		51182	12619	19838	83639
S/G/Y/R/B/O	NT_005832	AC112504	142294107	3			AC107019	142294107		17798	0	26780	44578
S/G/Y/R/B/O	NT_005832	AC112504	142294107	3			AC112133	142294107		39406	0	0	39406
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3	chr3	NT_005832	AC133435	142559669	3	0	2002	0	2002
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC010934	142509184		35408	1777	8825	46010
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC010934	142509184		35408	1777	8825	46010
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC044879	142509184		30076	1526	7332	38934
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC044879	142509184		30076	1526	7332	38934
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC107019	142509184		18199	0	34312	52511
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC107019	142509184		18199	0	34312	52511
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC112133	142509184		36590	0	4539	41129
S/G/Y/R/B/O	NT_005832	AC128648	142509184	3			AC112133	142509184		36590	0	4539	41129
S/G/Y/R/B/O	NT_005832	AC133435	142559669	3	chr3	NT_005832	AC108679	142672217	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005832	AC133435	142559669	3			AC010934	142559669		18585	0	3799	22384
S/G/Y/R/B/O	NT_005832	AC133435	142559669	3			AC044879	142559669		37192	10121	9524	56837
S/G/Y/R/B/O	NT_005832	AC133435	142559669	3			AC080008	142559669		28502	0	16718	45220
S/G/Y/R/B/O	NT_005832	AC133435	142559669	3			AC112133	142672217		40441	2238	0	42679
S/G/Y/R/B/O	NT_005832	AC133435	142559669	3			AC123384	142672217		43737	6023	0	49760
S/G/Y/R/B/O	NT_005832	AC108679	142672217	3	chr3	NT_005832	AC023508	142823667	3	0	1140	0	1140
S/G/Y/R/B/O	NT_005832	AC108679	142672217	3			AC123384	142823667		24288	0	0	24288
S/G/Y/R/B/O	NT_005832	AC023508	142823667	3	chr3	NT_005832	AC109992	142958632	3	0	0	0	0
S/G/Y/R/B/O	NT_005832	AC109992	142958632	3	chr3	NT_005832	AC134509	143069171	3	0	2013	0	2013
S/G/Y/R/B/O	NT_005832	AC134509	143069171	3	chr3	NT_005832	AC072028	143152010	3	2049	0	0	2049
S/G/Y/R/B/O	NT_005832	AC072028	143152010	3	chr3	NT_005832	AC022291	143338749	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005832	AC022291	143338749	3	chr3	NT_005832	AC021074	143363227	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005832	AC022291	143338749	3			AC013554	143069171		10456	3234	4890	18580
S/G/Y/R/B/O	NT_005832	AC021074	143363227	3	chr3	NT_005832	AC026304	143546327	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005832	AC021074	143363227	3			AC013554	143152010		85104	10743	15216	111063
S/G/Y/R/B/O	NT_005832	AC021074	143363227	3			AC020648	143152010		34456	0	0	34456
S/G/Y/R/B/O	NT_005832	AC021074	143363227	3			AC055737	143546327		20798	2541	0	23339
S/G/Y/R/B/O	NT_005832	AC021074	143363227	3			AC079593	143546327		90033	0	67384	157417
S/G/Y/R/B/O	NT_005832	AC026304	143546327	3	chr3	NT_005832	AC018450	143551027	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005832	AC018450	143551027	3
S/G/Y/R/B/O	NT_005832	AC018450	143551027	3			AC020648	143363227		30765	0	36397	67162
S/G/Y/R/B/O	NT_005832	AC018450	143551027	3			AC055737	143546327		90939	3216	20173	114328

NT_019358

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_019358	AC130889	143750499	3	chr3	NT_019358	AC131210	143801732	3	0	1996	0	1996
S/G/Y/R/B/O	NT_019358	AC130889	143750499	3			AC117400	143546327		30760	0	10233	40993
S/G/Y/R/B/O	NT_019358	AC130889	143750499	3			AC117400	143546327		30760	0	10233	40993
S/G/Y/R/B/O	NT_019358	AC131210	143801732	3	chr3	NT_019358	AC073242	143984211	1	47385	0	0	47385
S/G/Y/R/B/O	NT_019358	AC131210	143801732	3			AC117400	86959494		11619	0	60429	72048
S/G/Y/R/B/O	NT_019358	AC073242	143984211	1	chr3	NT_019358	AC116423	144017189	3	53819	0	0	53819
S/G/Y/R/B/O	NT_019358	AC073242	143984211	1			AC013641	143750499		58679	0	0	58679
S/G/Y/R/B/O	NT_019358	AC116423	144017189	3	chr3	NT_019358	AC073358	144071109	3	2005	0	0	2005
S/G/Y/R/B/O	NT_019358	AC116423	144017189	3			AC013641	143801732		54362	0	0	54362
S/G/Y/R/B/O	NT_019358	AC073358	144071109	3	chr3	NT_019358	AC016934	144233182	3	0	0	0	0
S/G/Y/R/B/O	NT_019358	AC073358	144071109	3			AC013641	144071109		101203	0	0	101203
S/G/Y/R/B/O	NT_019358	AC016934	144233182	3	chr3	NT_019358	AC107421	144277506	3	0	1454	0	1454
S/G/Y/R/B/O	NT_019358	AC107421	144277506	3	chr3	NT_019358	AC117379	144436448	3	27263	0	0	27263
S/G/Y/R/B/O	NT_019358	AC107421	144277506	3			AC013592	144277506		125167	6819	2827	134813
S/G/Y/R/B/O	NT_019358	AC117379	144436448	3	chr3	NT_019358	AC117387	144590376	3	0	0	0	0
S/G/Y/R/B/O	NT_019358	AC117379	144436448	3			AC012219	144436448		49571	2063	8159	59793
S/G/Y/R/B/O	NT_019358	AC117379	144436448	3			AC013592	144436448		19263	2421	0	21684
S/G/Y/R/B/O	NT_019358	AC117379	144436448	3			AC130430	144277506		42474	0	9422	51896
S/G/Y/R/B/O	NT_019358	AC117387	144590376	3	chr3	NT_019358	AC022495	144640653	3	0	1999	0	1999
S/G/Y/R/B/O	NT_019358	AC117387	144590376	3			AC012219	144277506		62785	0	0	62785
S/G/Y/R/B/O	NT_019358	AC117387	144590376	3			AC130430	144640653		21812	0	41005	62817
S/G/Y/R/B/O	NT_019358	AC022495	144640653	3
S/G/Y/R/B/O	NT_019358	AC022495	144640653	3			AC012219	144640653		15757	0	0	15757
S/G/Y/R/B/O	NT_019358	AC022495	144640653	3			AC130430	144590376		15794	0	0	15794

NT_005775

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005775	AC117397	144804708	3	chr3	NT_005775	AC011592	144890105	3	42930	0	0	42930
S/G/Y/R/B/O	NT_005775	AC117397	144804708	3			AC073503	144890105		41454	9686	34048	85188
S/G/Y/R/B/O	NT_005775	AC011592	144890105	3	chr3	NT_005775	AC083803	145042237	3	41216	0	0	41216
S/G/Y/R/B/O	NT_005775	AC011592	144890105	3			AC073503	144890105		36776	3860	22770	63406
S/G/Y/R/B/O	NT_005775	AC011592	144890105	3			AC092926	145042237		42693	0	0	42693
S/G/Y/R/B/O	NT_005775	AC083803	145042237	3	chr3	NT_005775	AC012152	145143678	3	0	0	47518	47518
S/G/Y/R/B/O	NT_005775	AC083803	145042237	3			AC073631	145143678		35968	0	16451	52419
S/G/Y/R/B/O	NT_005775	AC012152	145143678	3	chr3	NT_005775	AC069426	145275937	3	15150	0	0	15150
S/G/Y/R/B/O	NT_005775	AC012152	145143678	3			AC073631	145275937		87333	0	16564	103897
S/G/Y/R/B/O	NT_005775	AC012152	145143678	3			AC073984	145275937		37239	0	0	37239
S/G/Y/R/B/O	NT_005775	AC012152	145143678	3			AC097102	145042237		15118	0	0	15118
S/G/Y/R/B/O	NT_005775	AC069426	145275937	3	chr3	NT_005775	AC092995	145389281	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005775	AC069426	145275937	3			AC073984	145143678		27060	0	24645	51705
S/G/Y/R/B/O	NT_005775	AC069426	145275937	3			AC097102	145389281		127607	0	0	127607
S/G/Y/R/B/O	NT_005775	AC092995	145389281	3	chr3	NT_005775	AC117447	145503025	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC092995	145389281	3			AC068131	145389281		54594	0	31343	85937
S/G/Y/R/B/O	NT_005775	AC092995	145389281	3			AC097102	145275937		40151	0	0	40151
S/G/Y/R/B/O	NT_005775	AC117447	145503025	3	chr3	NT_005775	AC134099	145579253	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC134099	145579253	3	chr3	NT_005775	AC134507	145644907	3	85780	0	0	85780
S/G/Y/R/B/O	NT_005775	AC134507	145644907	3	chr3	NT_005775	AC117391	145757072	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC117391	145757072	3	chr3	NT_005775	AC016967	145918544	1	8536	0	0	8536
S/G/Y/R/B/O	NT_005775	AC016967	145918544	1	chr3	NT_005775	AC069424	146025266	1	9886	0	32704	42590
S/G/Y/R/B/O	NT_005775	AC016967	145918544	1			AC022734	145918544		70049	3646	1533	75228
S/G/Y/R/B/O	NT_005775	AC016967	145918544	1			AC076967	146025266		42635	0	0	42635
S/G/Y/R/B/O	NT_005775	AC069424	146025266	1	chr3	NT_005775	AC073895	146088624	3	102342	0	0	102342
S/G/Y/R/B/O	NT_005775	AC069424	146025266	1			AC022734	145918544		53851	0	2504	56355
S/G/Y/R/B/O	NT_005775	AC069424	146025266	1			AC076967	146088624		98247	0	36361	134608
S/G/Y/R/B/O	NT_005775	AC073895	146088624	3	chr3	NT_005775	AC069435	146255935	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005775	AC073895	146088624	3			AC076967	146255935		71017	0	0	71017
S/G/Y/R/B/O	NT_005775	AC069435	146255935	3	chr3	NT_005775	AC117468	146365791	3	2033	0	0	2033
S/G/Y/R/B/O	NT_005775	AC069435	146255935	3			AC063975	146255935		25941	7593	14150	47684
S/G/Y/R/B/O	NT_005775	AC117468	146365791	3	chr3	NT_005775	AC055758	146387817	3	2032	0	0	2032
S/G/Y/R/B/O	NT_005775	AC055758	146387817	3	chr3	NT_005775	AC092976	146561273	3	0	0	1551	1551
S/G/Y/R/B/O	NT_005775	AC055758	146387817	3			AC026946	146255935		45044	2801	90426	138271
S/G/Y/R/B/O	NT_005775	AC092976	146561273	3	chr3	NT_005775	AC107021	146603320	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC092976	146561273	3			AC018369	146365791		28738	0	0	28738
S/G/Y/R/B/O	NT_005775	AC092976	146561273	3			AC026946	146365791		43241	0	405	43646
S/G/Y/R/B/O	NT_005775	AC107021	146603320	3	chr3	NT_005775	AC092982	146725962	3	21018	0	0	21018
S/G/Y/R/B/O	NT_005775	AC107021	146603320	3			AC018369	146387817		103364	0	13598	116962
S/G/Y/R/B/O	NT_005775	AC092982	146725962	3	chr3	NT_005775	AC048357	146894217	1	25773	0	0	25773
S/G/Y/R/B/O	NT_005775	AC092982	146725962	3			AC018369	146725962		20765	0	0	20765
S/G/Y/R/B/O	NT_005775	AC092982	146725962	3			AC053539	146894217		63540	1680	73856	139076
S/G/Y/R/B/O	NT_005775	AC048357	146894217	1	chr3	NT_005775	AC130509	146910259	3	18642	0	2480	21122
S/G/Y/R/B/O	NT_005775	AC130509	146910259	3	chr3	NT_005775	AC069528	146972677	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005775	AC069528	146972677	3	chr3	NT_005775	AC116544	147135840	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005775	AC069528	146972677	3			AC015999	146972677		26480	0	20265	46745
S/G/Y/R/B/O	NT_005775	AC069528	146972677	3			AC021289	146972677		28118	0	1885	30003
S/G/Y/R/B/O	NT_005775	AC069528	146972677	3			AC130433	147135840		76301	0	0	76301
S/G/Y/R/B/O	NT_005775	AC116544	147135840	3	chr3	NT_005775	AC027748	147246127	1	33460	10864	31017	75341
S/G/Y/R/B/O	NT_005775	AC116544	147135840	3			AC015999	146910259		46045	0	22928	68973
S/G/Y/R/B/O	NT_005775	AC116544	147135840	3			AC021289	146910259		99843	6298	0	106141
S/G/Y/R/B/O	NT_005775	AC116544	147135840	3			AC130433	147251695		87696	0	0	87696
S/G/Y/R/B/O	NT_005775	AC027748	147246127	1	chr3	NT_005775	AC092990	147251695	3	25234	3787	0	29021
S/G/Y/R/B/O	NT_005775	AC027748	147246127	1			AC015999	147251695		32753	7856	8039	48648
S/G/Y/R/B/O	NT_005775	AC027748	147246127	1			AC021289	147251695		33384	19585	17355	70324
S/G/Y/R/B/O	NT_005775	AC027748	147246127	1			AC046133	147251695		35282	10486	40251	86019
S/G/Y/R/B/O	NT_005775	AC027748	147246127	1			AC130433	147135840		20679	7898	20966	49543
S/G/Y/R/B/O	NT_005775	AC092990	147251695	3	chr3	NT_005775	AC108699	147313301	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC092990	147251695	3			AC046133	147246127		14459	0	16422	30881
S/G/Y/R/B/O	NT_005775	AC108699	147313301	3	chr3	NT_005775	AC069066	147464881	3	85929	0	0	85929
S/G/Y/R/B/O	NT_005775	AC108699	147313301	3			AC011186	147135840		100320	0	10521	110841
S/G/Y/R/B/O	NT_005775	AC069066	147464881	3	chr3	NT_005775	AC108745	147525396	3	0	1989	0	1989
S/G/Y/R/B/O	NT_005775	AC069066	147464881	3			AC011186	147464881		85825	0	0	85825
S/G/Y/R/B/O	NT_005775	AC108745	147525396	3	chr3	NT_005775	AC092956	147589699	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005775	AC108745	147525396	3			AC117423	147589699		41220	0	0	41220
S/G/Y/R/B/O	NT_005775	AC092956	147589699	3	chr3	NT_005775	AC092957	147784209	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005775	AC092956	147589699	3			AC026554	147589699		12147	2685	0	14832
S/G/Y/R/B/O	NT_005775	AC092956	147589699	3			AC026824	147589699		56240	6273	6977	69490
S/G/Y/R/B/O	NT_005775	AC092956	147589699	3			AC068886	147589699		48557	3516	5878	57951
S/G/Y/R/B/O	NT_005775	AC092956	147589699	3			AC117423	147525396		57057	0	0	57057
S/G/Y/R/B/O	NT_005775	AC092957	147784209	3	chr3	NT_005775	AC092959	147943790	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005775	AC092957	147784209	3			AC026554	147525396		142353	1706	1281	145340
S/G/Y/R/B/O	NT_005775	AC092957	147784209	3			AC026554	147525396		142353	1706	1281	145340
S/G/Y/R/B/O	NT_005775	AC092957	147784209	3			AC068886	147525396		91053	5110	1080	97243
S/G/Y/R/B/O	NT_005775	AC092957	147784209	3			AC068886	147525396		91053	5110	1080	97243
S/G/Y/R/B/O	NT_005775	AC092959	147943790	3	chr3	NT_005775	AC112507	148071369	3	0	0	49653	49653
S/G/Y/R/B/O	NT_005775	AC092959	147943790	3			AC026554	147943790		20594	0	0	20594
S/G/Y/R/B/O	NT_005775	AC092959	147943790	3			AC027060	147943790		125161	19694	7975	152830
S/G/Y/R/B/O	NT_005775	AC112507	148071369	3	chr3	NT_005775	AC092996	148256065	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005775	AC112507	148071369	3			AC027060	148071369		33277	3721	5852	42850
S/G/Y/R/B/O	NT_005775	AC112507	148071369	3			AC027415	148071369		16968	0	0	16968
S/G/Y/R/B/O	NT_005775	AC092996	148256065	3	chr3	NT_005775	AC092925	148386940	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC092996	148256065	3			AC027415	148256065		58473	12388	6147	77008
S/G/Y/R/B/O	NT_005775	AC092996	148256065	3			AC112137	148256065		28627	0	0	28627
S/G/Y/R/B/O	NT_005775	AC092925	148386940	3	chr3	NT_005775	AC121755	148535070	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005775	AC092925	148386940	3			AC026135	148071369		89722	2187	30689	122598
S/G/Y/R/B/O	NT_005775	AC121755	148535070	3	chr3	NT_005775	AC092958	148556296	3	0	2004	0	2004
S/G/Y/R/B/O	NT_005775	AC092958	148556296	3	chr3	NT_005775	AC025566	148716984	3	0	0	1900	1900
S/G/Y/R/B/O	NT_005775	AC092958	148556296	3			AC020727	148556296		19480	0	5710	25190
S/G/Y/R/B/O	NT_005775	AC092958	148556296	3			AC021861	148556296		134623	0	14226	148849
S/G/Y/R/B/O	NT_005775	AC092958	148556296	3			AC092992	148716984		73514	2648	8576	84738
S/G/Y/R/B/O	NT_005775	AC025566	148716984	3	chr3	NT_005775	AC121756	148915373	3	0	1191	0	1191
S/G/Y/R/B/O	NT_005775	AC025566	148716984	3			AC020727	148535070		36491	3761	12422	52674
S/G/Y/R/B/O	NT_005775	AC025566	148716984	3			AC092992	148556296		66818	2203	37627	106648
S/G/Y/R/B/O	NT_005775	AC025566	148716984	3			AC117410	148556296		89517	0	0	89517
S/G/Y/R/B/O	NT_005775	AC121756	148915373	3	chr3	NT_005775	AC131006	149055182	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005775	AC121756	148915373	3			AC117410	148716984		89426	0	0	89426
S/G/Y/R/B/O	NT_005775	AC131006	149055182	3	chr3	NT_005775	AC069410	149060763	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005775	AC069410	149060763	3	chr3	NT_005775	AC025155	149237687	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC069410	149060763	3			AC024991	148915373		20565	4720	2956	28241
S/G/Y/R/B/O	NT_005775	AC069410	149060763	3			AC025153	148915373		13791	0	0	13791
S/G/Y/R/B/O	NT_005775	AC069410	149060763	3			AC093000	148915373		20924	4247	2508	27679
S/G/Y/R/B/O	NT_005775	AC025155	149237687	3	chr3	NT_005775	AC024897	149249368	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005775	AC025155	149237687	3			AC024991	149249368		10205	4617	2801	17623
S/G/Y/R/B/O	NT_005775	AC025155	149237687	3			AC025153	149249368		18226	0	15156	33382
S/G/Y/R/B/O	NT_005775	AC025155	149237687	3			AC093000	149249368		10235	2172	3214	15621
S/G/Y/R/B/O	NT_005775	AC024897	149249368	3	chr3	NT_005775	AC092979	149452161	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005775	AC024897	149249368	3			AC024991	149249368		77557	8498	4434	90489
S/G/Y/R/B/O	NT_005775	AC024897	149249368	3			AC025153	149249368		52385	6718	12747	71850
S/G/Y/R/B/O	NT_005775	AC024897	149249368	3			AC025354	149237687		29811	0	3535	33346
S/G/Y/R/B/O	NT_005775	AC024897	149249368	3			AC093000	149452161		88893	0	5539	94432
S/G/Y/R/B/O	NT_005775	AC092979	149452161	3	chr3	NT_005775	AC021059	149573435	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005775	AC092979	149452161	3			AC013626	149452161		69104	0	14308	83412
S/G/Y/R/B/O	NT_005775	AC092979	149452161	3			AC025354	149249368		122657	0	0	122657
S/G/Y/R/B/O	NT_005775	AC092979	149452161	3			AC055734	149249368		23280	8525	6541	38346
S/G/Y/R/B/O	NT_005775	AC092979	149452161	3			AC067729	149249368		48289	0	0	48289
S/G/Y/R/B/O	NT_005775	AC092979	149452161	3			AC130428	149249368		16069	0	68318	84387
S/G/Y/R/B/O	NT_005775	AC021059	149573435	3	chr3	NT_005775	AC131209	149735506	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC021059	149573435	3	chr3	NT_037577	AC126182	121338585	1	23646	3924	3564	31134
S/G/Y/R/B/O	NT_005775	AC021059	149573435	3			AC013626	149249368		76834	2444	0	79278
S/G/Y/R/B/O	NT_005775	AC021059	149573435	3			AC068577	149249368		23073	8186	4085	35344
S/G/Y/R/B/O	NT_005775	AC021059	149573435	3			AC130428	121338585		64880	0	14477	79357
S/G/Y/R/B/O	NT_005775	AC131209	149735506	3	chr3	NT_005775	AC093001	149783173	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005775	AC131209	149735506	3	chr3	NT_037577	AC126182	121338585	1	38480	2410	0	40890
S/G/Y/R/B/O	NT_005775	AC131209	149735506	3			AC068577	121338585		35896	7762	1942	45600
S/G/Y/R/B/O	NT_005775	AC131209	149735506	3			AC072027	121338585		34844	4533	0	39377
S/G/Y/R/B/O	NT_005775	AC093001	149783173	3	chr3	NT_005775	AC073522	149942704	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005775	AC093001	149783173	3			AC025119	121338585		166100	1819	872	168791
S/G/Y/R/B/O	NT_005775	AC093001	149783173	3			AC068577	121338585		46050	1482	3715	51247
S/G/Y/R/B/O	NT_005775	AC093001	149783173	3			AC072027	121338585		46500	1774	47037	95311
S/G/Y/R/B/O	NT_005775	AC073522	149942704	3	chr3	NT_005775	AC108751	149976886	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005775	AC108751	149976886	3	chr3	NT_005775	AC012014	150106780	3	2013	0	0	2013
S/G/Y/R/B/O	NT_005775	AC108751	149976886	3			AC098589	149942704		56968	4253	38899	100120
S/G/Y/R/B/O	NT_005775	AC012014	150106780	3	chr3	NT_005775	AC108672	150304290	3	0	1902	0	1902
S/G/Y/R/B/O	NT_005775	AC012014	150106780	3			AC098589	149942704		41849	0	0	41849
S/G/Y/R/B/O	NT_005775	AC108672	150304290	3	chr3	NT_005775	AC069216	150320767	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005775	AC069216	150320767	3	chr3	NT_005775	AC117395	150468913	3	0	0	2715	2715
S/G/Y/R/B/O	NT_005775	AC069216	150320767	3			AC024412	150320767		58021	8215	5173	71409
S/G/Y/R/B/O	NT_005775	AC117395	150468913	3	chr3	NT_005775	AC022494	150638808	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005775	AC117395	150468913	3			AC021050	150468913		36763	0	0	36763
S/G/Y/R/B/O	NT_005775	AC117395	150468913	3			AC024412	150638808		29489	2940	4808	37237
S/G/Y/R/B/O	NT_005775	AC022494	150638808	3	chr3	NT_005775	AC117386	150659097	3	2006	0	0	2006
S/G/Y/R/B/O	NT_005775	AC117386	150659097	3	chr3	NT_005775	AC135000	150843967	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005775	AC135000	150843967	3	chr3	NT_005775	AC018545	150910722	3	0	0	1710	1710
S/G/Y/R/B/O	NT_005775	AC018545	150910722	3	chr3	NT_005775	AC107426	151081081	3	0	0	0	0
S/G/Y/R/B/O	NT_005775	AC107426	151081081	3

NT_005612

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005612	AC130045	151203621	3	chr3	NT_005612	AC011317	151210121	3	0	2007	0	2007
S/G/Y/R/B/O	NT_005612	AC011317	151210121	3	chr3	NT_005612	AC016142	151355181	1	76563	0	0	76563
S/G/Y/R/B/O	NT_005612	AC011317	151210121	3			AC068801	151355181		73582	1580	0	75162
S/G/Y/R/B/O	NT_005612	AC011317	151210121	3			AC069236	151355181		43580	0	0	43580
S/G/Y/R/B/O	NT_005612	AC016142	151355181	1	chr3	NT_005612	AC108674	151433191	1	0	0	17860	17860
S/G/Y/R/B/O	NT_005612	AC016142	151355181	1			AC068801	151210121		110649	1580	4624	116853
S/G/Y/R/B/O	NT_005612	AC108674	151433191	1	chr3	NT_005612	AC020636	151449730	3	101019	0	0	101019
S/G/Y/R/B/O	NT_005612	AC108674	151433191	1			AC036109	151449730		39436	1982	1993	43411
S/G/Y/R/B/O	NT_005612	AC108674	151433191	1			AC068801	151449730		33587	0	8115	41702
S/G/Y/R/B/O	NT_005612	AC020636	151449730	3	chr3	NT_005612	AC108726	151629227	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005612	AC020636	151449730	3			AC036109	151449730		65303	10591	19079	94973
S/G/Y/R/B/O	NT_005612	AC108726	151629227	3	chr3	NT_005612	AC078816	151663246	3	0	2001	0	2001
S/G/Y/R/B/O	NT_005612	AC108726	151629227	3			AC036109	151449730		26896	0	0	26896
S/G/Y/R/B/O	NT_005612	AC078816	151663246	3	chr3	NT_005612	AC024886	151845103	3	2006	0	0	2006
S/G/Y/R/B/O	NT_005612	AC078816	151663246	3			AC078919	151845103		16557	8969	2320	27846
S/G/Y/R/B/O	NT_005612	AC024886	151845103	3	chr3	NT_005612	AC117454	152016367	3	0	0	1751	1751
S/G/Y/R/B/O	NT_005612	AC024886	151845103	3			AC117393	151663246		104949	0	0	104949
S/G/Y/R/B/O	NT_005612	AC117454	152016367	3	chr3	NT_005612	AC017016	152126755	3	12546	0	0	12546
S/G/Y/R/B/O	NT_005612	AC017016	152126755	3	chr3	NT_005612	AC069067	152307436	3	170214	0	0	170214
S/G/Y/R/B/O	NT_005612	AC069067	152307436	3	chr3	NT_005612	AC068647	152309435	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005612	AC068647	152309435	3	chr3	NT_005612	AC084301	152440175	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005612	AC068647	152309435	3			AC016455	152016367		27709	16168	12071	55948
S/G/Y/R/B/O	NT_005612	AC068647	152309435	3			AC068635	152016367		50644	7375	12104	70123
S/G/Y/R/B/O	NT_005612	AC068647	152309435	3			AC078807	152307436		27949	3820	9141	40910
S/G/Y/R/B/O	NT_005612	AC068647	152309435	3			AC116026	152440175		90342	0	0	90342
S/G/Y/R/B/O	NT_005612	AC084301	152440175	3	chr3	NT_005612	AC084435	152611048	1	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC084301	152440175	3			AC016455	152440175		58552	0	8084	66636
S/G/Y/R/B/O	NT_005612	AC084301	152440175	3			AC022365	152440175		43370	0	14497	57867
S/G/Y/R/B/O	NT_005612	AC084301	152440175	3			AC068646	152440175		16049	0	7978	24027
S/G/Y/R/B/O	NT_005612	AC084435	152611048	1	chr3	NT_005612	AC108718	152709457	3	66364	0	0	66364
S/G/Y/R/B/O	NT_005612	AC084435	152611048	1	chr3	NT_005612	AC025313	152729075	1	93492	0	20064	113556
S/G/Y/R/B/O	NT_005612	AC084435	152611048	1			AC009809	152736861		58815	0	1578	60393
S/G/Y/R/B/O	NT_005612	AC084435	152611048	1			AC022365	152736861		62176	0	4785	66961
S/G/Y/R/B/O	NT_005612	AC084435	152611048	1			AC068646	152729075		51476	2869	45684	100029
S/G/Y/R/B/O	NT_005612	AC084435	152611048	1			AC130429	152709457		114511	0	0	114511
S/G/Y/R/B/O	NT_005612	AC108718	152709457	3	chr3	NT_005612	AC025313	152729075	1	42309	0	23540	65849
S/G/Y/R/B/O	NT_005612	AC108718	152709457	3			AC009809	152736861		30126	0	1578	31704
S/G/Y/R/B/O	NT_005612	AC108718	152709457	3			AC068646	152729075		28296	0	20351	48647
S/G/Y/R/B/O	NT_005612	AC108718	152709457	3			AC130429	152738560		66181	0	0	66181
S/G/Y/R/B/O	NT_005612	AC025313	152729075	1	chr3	NT_005612	AC009760	152736861	1	31571	2892	3711	38174
S/G/Y/R/B/O	NT_005612	AC025313	152729075	1	chr3	NT_005612	AC084435	152611048	1	93492	0	20064	113556
S/G/Y/R/B/O	NT_005612	AC025313	152729075	1	chr3	NT_005612	AC106722	152738560	3	44510	0	0	44510
S/G/Y/R/B/O	NT_005612	AC025313	152729075	1			AC009809	152736861		86202	2303	0	88505
S/G/Y/R/B/O	NT_005612	AC025313	152729075	1			AC022365	152736861		18946	3276	17767	39989
S/G/Y/R/B/O	NT_005612	AC025313	152729075	1			AC068646	152736861		71621	4444	28807	104872
S/G/Y/R/B/O	NT_005612	AC025313	152729075	1			AC130429	152709457		128324	0	20097	148421
S/G/Y/R/B/O	NT_005612	AC009760	152736861	1	chr3	NT_005612	AC106722	152738560	3	94046	3472	7857	105375
S/G/Y/R/B/O	NT_005612	AC009760	152736861	1	chr3	NT_005612	AC026347	152865341	3	28615	1661	4298	34574
S/G/Y/R/B/O	NT_005612	AC009760	152736861	1			AC009809	57648002		64966	5245	11535	81746
S/G/Y/R/B/O	NT_005612	AC009760	152736861	1			AC130429	169019023		31565	2892	3682	38139
S/G/Y/R/B/O	NT_005612	AC106722	152738560	3	chr3	NT_005612	AC026347	152865341	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005612	AC106722	152738560	3	chr3	NT_005612	AC025313	152729075	1	44510	0	0	44510
S/G/Y/R/B/O	NT_005612	AC106722	152738560	3			AC009809	152736861		81766	2448	15817	100031
S/G/Y/R/B/O	NT_005612	AC106722	152738560	3			AC068646	152865341		22734	0	9884	32618
S/G/Y/R/B/O	NT_005612	AC106722	152738560	3			AC130429	152709457		29506	0	14823	44329
S/G/Y/R/B/O	NT_005612	AC026347	152865341	3	chr3	NT_005612	AC069242	153058772	3	93571	0	0	93571
S/G/Y/R/B/O	NT_005612	AC026347	152865341	3	chr3	NT_005612	AC009760	152736861	1	28615	1661	4298	34574
S/G/Y/R/B/O	NT_005612	AC026347	152865341	3			AC011859	152736861		97423	484	39186	137093
S/G/Y/R/B/O	NT_005612	AC026347	152865341	3			AC048333	152736861		78537	0	21508	100045
S/G/Y/R/B/O	NT_005612	AC026347	152865341	3			AC068636	152736861		21269	7831	68621	97721
S/G/Y/R/B/O	NT_005612	AC026347	152865341	3			AC078804	153058772		31116	0	22167	53283
S/G/Y/R/B/O	NT_005612	AC069242	153058772	3	chr3	NT_005612	AC117420	153149857	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005612	AC069242	153058772	3			AC011859	152738560		89651	0	16149	105800
S/G/Y/R/B/O	NT_005612	AC069242	153058772	3			AC048333	152865341		39564	0	0	39564
S/G/Y/R/B/O	NT_005612	AC069242	153058772	3			AC068636	152865341		10885	5184	24691	40760
S/G/Y/R/B/O	NT_005612	AC069242	153058772	3			AC078804	152865341		60606	593	60932	122131
S/G/Y/R/B/O	NT_005612	AC117420	153149857	3	chr3	NT_005612	AC092924	153184589	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005612	AC092924	153184589	3	chr3	NT_005612	AC013251	153338001	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005612	AC092924	153184589	3			AC021662	153338001		47054	1007	14416	62477
S/G/Y/R/B/O	NT_005612	AC092924	153184589	3			AC067899	153338001		86861	6175	38453	131489
S/G/Y/R/B/O	NT_005612	AC013251	153338001	3	chr3	NT_005612	AC069436	153512252	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005612	AC013251	153338001	3			AC021662	153149857		35012	3392	9722	48126
S/G/Y/R/B/O	NT_005612	AC013251	153338001	3			AC067899	153149857		29160	2647	0	31807
S/G/Y/R/B/O	NT_005612	AC069436	153512252	3	chr3	NT_005612	AC117394	153599129	3	0	2000	0	2000
S/G/Y/R/B/O	NT_005612	AC069436	153512252	3			AC069072	153338001		17818	4478	9603	31899
S/G/Y/R/B/O	NT_005612	AC117394	153599129	3	chr3	NT_005612	AC125609	153797299	3	0	2004	0	2004
S/G/Y/R/B/O	NT_005612	AC117394	153599129	3			AC069072	153599129		47301	2042	25285	74628
S/G/Y/R/B/O	NT_005612	AC117394	153599129	3			AC069415	153599129		26721	4570	28191	59482
S/G/Y/R/B/O	NT_005612	AC125609	153797299	3	chr3	NT_005612	AC078788	153920129	3	0	2004	0	2004
S/G/Y/R/B/O	NT_005612	AC125609	153797299	3			AC027715	153797299		90508	0	10678	101186
S/G/Y/R/B/O	NT_005612	AC078788	153920129	3	chr3	NT_005612	AC117421	154086667	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC078788	153920129	3			AC027715	153599129		24838	1801	4638	31277
S/G/Y/R/B/O	NT_005612	AC117421	154086667	3	chr3	NT_005612	AC069509	154120028	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC069509	154120028	3	chr3	NT_005612	AC135097	154270860	3	0	0	1775	1775
S/G/Y/R/B/O	NT_005612	AC069509	154120028	3			AC024537	153797299		58195	5978	24389	88562
S/G/Y/R/B/O	NT_005612	AC069509	154120028	3			AC068161	153797299		37642	1704	24672	64018
S/G/Y/R/B/O	NT_005612	AC135097	154270860	3	chr3	NT_005612	AC092998	154287757	3	2002	0	0	2002
S/G/Y/R/B/O	NT_005612	AC135097	154270860	3			AC068161	154270860		12021	0	0	12021
S/G/Y/R/B/O	NT_005612	AC135097	154270860	3			AC068161	154270860		12021	0	0	12021
S/G/Y/R/B/O	NT_005612	AC092998	154287757	3	chr3	NT_005612	AC073156	154318831	3	0	0	1877	1877
S/G/Y/R/B/O	NT_005612	AC092998	154287757	3			AC027188	154287757		30320	0	0	30320
S/G/Y/R/B/O	NT_005612	AC092998	154287757	3			AC068161	154287757		29308	0	0	29308
S/G/Y/R/B/O	NT_005612	AC073156	154318831	3	chr3	NT_005612	AC068985	154447969	3	0	1995	0	1995
S/G/Y/R/B/O	NT_005612	AC073156	154318831	3			AC027188	154270860		35191	5177	4457	44825
S/G/Y/R/B/O	NT_005612	AC068985	154447969	3	chr3	NT_005612	AC128717	154619074	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005612	AC068985	154447969	3			AC027188	154287757		27096	0	0	27096
S/G/Y/R/B/O	NT_005612	AC128717	154619074	3	chr3	NT_005612	AC073908	154630639	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC073908	154630639	3	chr3	NT_005612	AC018452	154673126	3	0	1047	0	1047
S/G/Y/R/B/O	NT_005612	AC073908	154630639	3			AC068240	154673126		42136	0	0	42136
S/G/Y/R/B/O	NT_005612	AC018452	154673126	3	chr3	NT_005612	AC134026	154843602	3	2006	0	0	2006
S/G/Y/R/B/O	NT_005612	AC018452	154673126	3			AC012341	154673126		90534	0	0	90534
S/G/Y/R/B/O	NT_005612	AC018452	154673126	3			AC041012	154673126		40042	0	698	40740
S/G/Y/R/B/O	NT_005612	AC018452	154673126	3			AC068240	154673126		75151	4270	0	79421
S/G/Y/R/B/O	NT_005612	AC018452	154673126	3			AC072034	154673126		37121	2669	12177	51967
S/G/Y/R/B/O	NT_005612	AC018452	154673126	3			AC130431	154630639		90559	0	0	90559
S/G/Y/R/B/O	NT_005612	AC134026	154843602	3	chr3	NT_005612	AC092946	154896209	3	2001	0	0	2001
S/G/Y/R/B/O	NT_005612	AC134026	154843602	3			AC012341	154843602		46103	0	0	46103
S/G/Y/R/B/O	NT_005612	AC134026	154843602	3			AC041012	154673126		54442	0	1758	56200
S/G/Y/R/B/O	NT_005612	AC134026	154843602	3			AC072034	154673126		52850	0	0	52850
S/G/Y/R/B/O	NT_005612	AC092946	154896209	3	chr3	NT_005612	AC092994	155011709	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005612	AC092946	154896209	3			AC064795	154896209		56773	0	1246	58019
S/G/Y/R/B/O	NT_005612	AC092946	154896209	3			AC072034	154896209		34788	0	7699	42487
S/G/Y/R/B/O	NT_005612	AC092994	155011709	3	chr3	NT_005612	AC117485	155169156	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005612	AC092994	155011709	3			AC064795	154843602		34921	0	987	35908
S/G/Y/R/B/O	NT_005612	AC092994	155011709	3			AC068521	154843602		82211	5911	36867	124989
S/G/Y/R/B/O	NT_005612	AC117485	155169156	3	chr3	NT_005612	AC069064	155309883	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC069064	155309883	3	chr3	NT_005612	AC073359	155374022	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC073359	155374022	3	chr3	NT_005612	AC117384	155550353	3	0	0	1949	1949
S/G/Y/R/B/O	NT_005612	AC073359	155374022	3			AC058793	155011709		94446	9833	0	104279
S/G/Y/R/B/O	NT_005612	AC117384	155550353	3	chr3	NT_005612	AC106724	155712952	3	113527	0	0	113527
S/G/Y/R/B/O	NT_005612	AC117384	155550353	3			AC012220	155550353		89093	6230	8512	103835
S/G/Y/R/B/O	NT_005612	AC106724	155712952	3	chr3	NT_005612	AC104831	155762256	3	0	1783	0	1783
S/G/Y/R/B/O	NT_005612	AC106724	155712952	3			AC012220	155712952		136831	6230	8517	151578
S/G/Y/R/B/O	NT_005612	AC106724	155712952	3			AC023482	155712952		43984	0	0	43984
S/G/Y/R/B/O	NT_005612	AC104831	155762256	3	chr3	NT_005612	AC131155	155875473	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005612	AC131155	155875473	3	chr3	NT_005612	AC108729	155880260	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC108729	155880260	3	chr3	NT_005612	AC012022	156005142	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC012022	156005142	3	chr3	NT_005612	AC068296	156171132	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC012022	156005142	3			AC068498	156005142		37557	0	0	37557
S/G/Y/R/B/O	NT_005612	AC068296	156171132	3	chr3	NT_005612	AC132006	156208872	3	2018	0	0	2018
S/G/Y/R/B/O	NT_005612	AC068296	156171132	3			AC068498	155880260		16457	0	0	16457
S/G/Y/R/B/O	NT_005612	AC132006	156208872	3	chr3	NT_005612	AC104472	156294361	1	37417	0	4613	42030
S/G/Y/R/B/O	NT_005612	AC132006	156208872	3			AC068498	156171132		47267	0	0	47267
S/G/Y/R/B/O	NT_005612	AC104472	156294361	1	chr3	NT_005612	AC026210	156367770	1	23884	7560	57004	88448
S/G/Y/R/B/O	NT_005612	AC104472	156294361	1			AC110152	156367770		112999	0	61048	174047
S/G/Y/R/B/O	NT_005612	AC026210	156367770	1	chr3	NT_005612	AC110490	156552035	3	14801	0	0	14801
S/G/Y/R/B/O	NT_005612	AC026210	156367770	1			AC110152	156294361		16728	3957	49001	69686
S/G/Y/R/B/O	NT_005612	AC110490	156552035	3	chr3	NT_005612	AC067721	156579030	3	0	1362	0	1362
S/G/Y/R/B/O	NT_005612	AC067721	156579030	3	chr3	NT_005612	AC125607	156750621	3	0	0	1899	1899
S/G/Y/R/B/O	NT_005612	AC067721	156579030	3			AC024160	156579030		50438	0	12478	62916
S/G/Y/R/B/O	NT_005612	AC125607	156750621	3	chr3	NT_005612	AC091607	156776718	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005612	AC125607	156750621	3			AC024160	156750621		21918	4075	3796	29789
S/G/Y/R/B/O	NT_005612	AC091607	156776718	3	chr3	NT_005612	AC022013	156952165	3	0	0	52930	52930
S/G/Y/R/B/O	NT_005612	AC091607	156776718	3			AC026176	156952165		10301	2445	23038	35784
S/G/Y/R/B/O	NT_005612	AC022013	156952165	3	chr3	NT_005612	AC069413	157068286	3	71558	0	0	71558
S/G/Y/R/B/O	NT_005612	AC022013	156952165	3			AC026176	156750621		29598	7534	45190	82322
S/G/Y/R/B/O	NT_005612	AC022013	156952165	3			AC063934	156750621		42441	7944	31379	81764
S/G/Y/R/B/O	NT_005612	AC069413	157068286	3	chr3	NT_005612	AC084036	157169692	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC069413	157068286	3			AC018507	156776718		103240	0	0	103240
S/G/Y/R/B/O	NT_005612	AC069413	157068286	3			AC063934	156952165		42776	5468	33935	82179
S/G/Y/R/B/O	NT_005612	AC084036	157169692	3	chr3	NT_005612	AC092927	157191722	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC084036	157169692	3			AC112772	156952165		11522	0	12915	24437
S/G/Y/R/B/O	NT_005612	AC092927	157191722	3	chr3	NT_005612	AC106708	157371264	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC092927	157191722	3			AC024165	156952165		25329	0	0	25329
S/G/Y/R/B/O	NT_005612	AC092927	157191722	3			AC040902	156952165		159677	2750	5352	167779
S/G/Y/R/B/O	NT_005612	AC092927	157191722	3			AC068316	156952165		10006	24658	29644	64308
S/G/Y/R/B/O	NT_005612	AC092927	157191722	3			AC112772	157371264		140125	0	0	140125
S/G/Y/R/B/O	NT_005612	AC106708	157371264	3	chr3	NT_005612	AC092993	157496369	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC106708	157371264	3			AC010935	157371264		68919	0	11761	80680
S/G/Y/R/B/O	NT_005612	AC106708	157371264	3			AC024165	157371264		74447	0	0	74447
S/G/Y/R/B/O	NT_005612	AC106708	157371264	3			AC130434	157191722		79592	0	0	79592
S/G/Y/R/B/O	NT_005612	AC092993	157496369	3	chr3	NT_005612	AC117392	157642228	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005612	AC092993	157496369	3			AC010935	157191722		21160	4525	1286	26971
S/G/Y/R/B/O	NT_005612	AC092993	157496369	3			AC024165	157191722		27163	0	0	27163
S/G/Y/R/B/O	NT_005612	AC092993	157496369	3			AC026913	157191722		76764	0	13586	90350
S/G/Y/R/B/O	NT_005612	AC092993	157496369	3			AC130434	157642228		21414	5722	0	27136
S/G/Y/R/B/O	NT_005612	AC117392	157642228	3	chr3	NT_005612	AC104411	157787743	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC104411	157787743	3	chr3	NT_005612	AC092944	157856238	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC092944	157856238	3	chr3	NT_005612	AC020630	158038922	3	0	1630	0	1630
S/G/Y/R/B/O	NT_005612	AC092944	157856238	3			AC026562	158038922		92800	2443	23782	119025
S/G/Y/R/B/O	NT_005612	AC092944	157856238	3			AC069256	158038922		149986	0	0	149986
S/G/Y/R/B/O	NT_005612	AC020630	158038922	3	chr3	NT_005612	AC084212	158201807	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC020630	158038922	3			AC015904	158038922		88978	0	17000	105978
S/G/Y/R/B/O	NT_005612	AC020630	158038922	3			AC092987	157856238		56771	0	26030	82801
S/G/Y/R/B/O	NT_005612	AC084212	158201807	3	chr3	NT_005612	AC024109	158345120	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005612	AC084212	158201807	3			AC015904	157856238		39500	7139	0	46639
S/G/Y/R/B/O	NT_005612	AC084212	158201807	3			AC026306	158345120		44672	0	15042	59714
S/G/Y/R/B/O	NT_005612	AC084212	158201807	3			AC092987	158345120		38240	7165	0	45405
S/G/Y/R/B/O	NT_005612	AC024109	158345120	3	chr3	NT_005612	AC055761	158457288	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005612	AC024109	158345120	3			AC026306	158345120		24464	0	23374	47838
S/G/Y/R/B/O	NT_005612	AC055761	158457288	3	chr3	NT_005612	AC079943	158605402	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC055761	158457288	3			AC063937	158345120		43737	1694	8784	54215
S/G/Y/R/B/O	NT_005612	AC079943	158605402	3	chr3	NT_005612	AC112502	158742954	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005612	AC112502	158742954	3	chr3	NT_005612	AC074276	158845514	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC112502	158742954	3			AC069232	158742954		28941	0	34790	63731
S/G/Y/R/B/O	NT_005612	AC074276	158845514	3	chr3	NT_005612	AC112774	159034751	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC074276	158845514	3			AC068766	158605402		63044	5195	25686	93925
S/G/Y/R/B/O	NT_005612	AC074276	158845514	3			AC069232	158605402		23060	5104	6912	35076
S/G/Y/R/B/O	NT_005612	AC074276	158845514	3			AC073452	158605402		70038	4210	1332	75580
S/G/Y/R/B/O	NT_005612	AC112774	159034751	3	chr3	NT_005612	AC129107	159040353	3	0	2004	0	2004
S/G/Y/R/B/O	NT_005612	AC129107	159040353	3	chr3	NT_005612	AC106707	159055166	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC106707	159055166	3	chr3	NT_005612	AC025033	159244225	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005612	AC106707	159055166	3			AC012027	159034751		57795	0	0	57795
S/G/Y/R/B/O	NT_005612	AC106707	159055166	3			AC068393	159244225		95447	9423	29482	134352
S/G/Y/R/B/O	NT_005612	AC106707	159055166	3			AC089988	159244225		21642	0	19565	41207
S/G/Y/R/B/O	NT_005612	AC025033	159244225	3	chr3	NT_005612	AC080013	159333022	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC025033	159244225	3			AC010936	159040353		34553	3152	21641	59346
S/G/Y/R/B/O	NT_005612	AC025033	159244225	3			AC012027	159040353		29060	2104	0	31164
S/G/Y/R/B/O	NT_005612	AC025033	159244225	3			AC089988	159333022		58683	0	0	58683
S/G/Y/R/B/O	NT_005612	AC080013	159333022	3	chr3	NT_005612	AC128694	159494092	3	0	1992	0	1992
S/G/Y/R/B/O	NT_005612	AC080013	159333022	3			AC010936	159055166		88542	0	29150	117692
S/G/Y/R/B/O	NT_005612	AC080013	159333022	3			AC021773	159055166		36596	0	12499	49095
S/G/Y/R/B/O	NT_005612	AC080013	159333022	3			AC089988	159244225		33665	0	0	33665
S/G/Y/R/B/O	NT_005612	AC128694	159494092	3	chr3	NT_005612	AC092999	159502836	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005612	AC092999	159502836	3	chr3	NT_005612	AC092997	159667916	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005612	AC092999	159502836	3			AC021773	159502836		47496	1931	17032	66459
S/G/Y/R/B/O	NT_005612	AC092999	159502836	3			AC026611	159502836		48380	1799	2173	52352
S/G/Y/R/B/O	NT_005612	AC092999	159502836	3			AC026960	159502836		112868	2916	0	115784
S/G/Y/R/B/O	NT_005612	AC092997	159667916	3	chr3	NT_005612	AC107312	159816970	3	0	1996	0	1996
S/G/Y/R/B/O	NT_005612	AC092997	159667916	3			AC026611	159494092		84170	8790	21447	114407
S/G/Y/R/B/O	NT_005612	AC107312	159816970	3	chr3	NT_005612	AC092861	159953898	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005612	AC107312	159816970	3			AC022566	159816970		96657	4330	1110	102097
S/G/Y/R/B/O	NT_005612	AC092861	159953898	3	chr3	NT_005612	AC063955	160018900	3	0	1995	0	1995
S/G/Y/R/B/O	NT_005612	AC092861	159953898	3			AC022566	159667916		52383	0	0	52383
S/G/Y/R/B/O	NT_005612	AC092861	159953898	3			AC022566	159667916		52383	0	0	52383
S/G/Y/R/B/O	NT_005612	AC063955	160018900	3	chr3	NT_005612	AC068770	160220592	3	106159	0	0	106159
S/G/Y/R/B/O	NT_005612	AC063955	160018900	3			AC012401	159816970		29746	0	0	29746
S/G/Y/R/B/O	NT_005612	AC063955	160018900	3			AC024446	159816970		59698	16132	17150	92980
S/G/Y/R/B/O	NT_005612	AC068770	160220592	3	chr3	NT_005612	AC131150	160275074	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005612	AC068770	160220592	3			AC012401	159953898		84227	0	0	84227
S/G/Y/R/B/O	NT_005612	AC068770	160220592	3			AC024446	159953898		75011	12231	12779	100021
S/G/Y/R/B/O	NT_005612	AC068770	160220592	3			AC092985	160018900		126837	0	0	126837
S/G/Y/R/B/O	NT_005612	AC131150	160275074	3	chr3	NT_005612	AC092943	160320047	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005612	AC131150	160275074	3			AC012401	160275074		48895	0	0	48895
S/G/Y/R/B/O	NT_005612	AC092943	160320047	3	chr3	NT_005612	AC021654	160409932	3	0	2005	0	2005
S/G/Y/R/B/O	NT_005612	AC092943	160320047	3			AC012401	160320047		47360	0	0	47360
S/G/Y/R/B/O	NT_005612	AC092943	160320047	3			AC025982	160409932		86856	2902	0	89758
S/G/Y/R/B/O	NT_005612	AC021654	160409932	3	chr3	NT_005612	AC025432	160575869	3	47224	0	0	47224
S/G/Y/R/B/O	NT_005612	AC021654	160409932	3	chr3	NT_005612	AC010370	160598072	3	29801	0	0	29801
S/G/Y/R/B/O	NT_005612	AC021654	160409932	3			AC025982	160575869		61110	5497	0	66607
S/G/Y/R/B/O	NT_005612	AC021654	160409932	3			AC129109	160320047		29795	0	0	29795
S/G/Y/R/B/O	NT_005612	AC025432	160575869	3	chr3	NT_005612	AC010370	160598072	3	52025	0	0	52025
S/G/Y/R/B/O	NT_005612	AC025432	160575869	3			AC129109	160409932		52020	0	0	52020
S/G/Y/R/B/O	NT_005612	AC010370	160598072	3	chr3	NT_005612	AC026118	160609439	3	93413	0	0	93413
S/G/Y/R/B/O	NT_005612	AC010370	160598072	3	chr3	NT_005612	AC021654	160409932	3	29801	0	0	29801
S/G/Y/R/B/O	NT_005612	AC026118	160609439	3	chr3	NT_005612	AC112641	160785547	3	0	0	0	0
S/G/Y/R/B/O	NT_005612	AC112641	160785547	3	chr3	NT_005612	AC079594	160899830	3	0	2054	0	2054
S/G/Y/R/B/O	NT_005612	AC079594	160899830	3	chr3	NT_005612	AC024221	161022477	3	2036	0	0	2036
S/G/Y/R/B/O	NT_005612	AC079594	160899830	3			AL355924	160785547		36686	0	0	36686
S/G/Y/R/B/O	NT_005612	AC024221	161022477	3	chr3	NT_005612	AC078868	161153394	3	0	1999	0	1999
S/G/Y/R/B/O	NT_005612	AC024221	161022477	3			AC012342	160785547		66652	1992	16952	85596
S/G/Y/R/B/O	NT_005612	AC024221	161022477	3			AC018850	160785547		80497	0	6415	86912
S/G/Y/R/B/O	NT_005612	AC024221	161022477	3			AC117393	160899830		67969	0	25204	93173
S/G/Y/R/B/O	NT_005612	AC024221	161022477	3			AC124946	160899830		15674	0	0	15674
S/G/Y/R/B/O	NT_005612	AC024221	161022477	3			AC130424	160899830		72140	2126	14567	88833
S/G/Y/R/B/O	NT_005612	AC078868	161153394	3	chr3	NT_005612	AC069224	161328696	3	0	1880	0	1880
S/G/Y/R/B/O	NT_005612	AC078868	161153394	3			AC012342	160899830		26639	0	14784	41423
S/G/Y/R/B/O	NT_005612	AC078868	161153394	3			AC018850	160899830		42957	0	10799	53756
S/G/Y/R/B/O	NT_005612	AC078868	161153394	3			AC117393	161328696		46210	2609	0	48819
S/G/Y/R/B/O	NT_005612	AC078868	161153394	3			AC124946	161328696		67891	0	0	67891
S/G/Y/R/B/O	NT_005612	AC078868	161153394	3			AC130424	161328696		21215	0	25627	46842
S/G/Y/R/B/O	NT_005612	AC069224	161328696	3	chr3	NT_005612	AC117413	161491756	3	2053	0	0	2053
S/G/Y/R/B/O	NT_005612	AC069224	161328696	3			AC020583	161328696		61094	9317	38589	109000
S/G/Y/R/B/O	NT_005612	AC069224	161328696	3			AC092986	161153394		49659	2805	43541	96005
S/G/Y/R/B/O	NT_005612	AC117413	161491756	3	chr3	NT_005612	AC016920	161511391	3	0	2001	0	2001
S/G/Y/R/B/O	NT_005612	AC016920	161511391	3	chr3	NT_005612	AC021649	161651517	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005612	AC016920	161511391	3			AC110872	161651517		32869	0	0	32869
S/G/Y/R/B/O	NT_005612	AC021649	161651517	3
S/G/Y/R/B/O	NT_005612	AC021649	161651517	3			AC110872	161511391		89643	0	0	89643

NT_022463

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022463	AC108738	161869031	3	chr3	NT_022463	AC128652	161958131	3	0	0	0	0
S/G/Y/R/B/O	NT_022463	AC128652	161958131	3	chr3	NT_022463	AC112491	162007308	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022463	AC128652	161958131	3			AC022190	161511391		43163	0	0	43163
S/G/Y/R/B/O	NT_022463	AC128652	161958131	3			AC112776	162007308		25410	0	0	25410
S/G/Y/R/B/O	NT_022463	AC112491	162007308	3	chr3	NT_022463	AC104471	162162066	3	0	0	0	0
S/G/Y/R/B/O	NT_022463	AC112491	162007308	3			AC018580	162007308		83468	7302	0	90770
S/G/Y/R/B/O	NT_022463	AC112491	162007308	3			AC022190	162007308		106661	2446	11286	120393
S/G/Y/R/B/O	NT_022463	AC112491	162007308	3			AC023276	162007308		90036	0	37121	127157
S/G/Y/R/B/O	NT_022463	AC112491	162007308	3			AC027535	162007308		13904	5691	0	19595
S/G/Y/R/B/O	NT_022463	AC112491	162007308	3			AC092974	162007308		46826	4213	50694	101733
S/G/Y/R/B/O	NT_022463	AC112491	162007308	3			AC112776	162007308		118979	2660	0	121639
S/G/Y/R/B/O	NT_022463	AC104471	162162066	3	chr3	NT_022463	AC112770	162293812	3	12377	0	0	12377
S/G/Y/R/B/O	NT_022463	AC104471	162162066	3			AC023276	161958131		25510	2981	0	28491
S/G/Y/R/B/O	NT_022463	AC104471	162162066	3			AC027535	161958131		58215	5692	38474	102381
S/G/Y/R/B/O	NT_022463	AC112770	162293812	3	chr3	NT_022463	AC131211	162469381	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022463	AC112770	162293812	3			AC012243	162293812		18082	0	35266	53348
S/G/Y/R/B/O	NT_022463	AC112770	162293812	3			AC064812	162293812		72934	7724	33124	113782
S/G/Y/R/B/O	NT_022463	AC131211	162469381	3	chr3	NT_022463	AC117459	162543174	3	2002	0	0	2002
S/G/Y/R/B/O	NT_022463	AC131211	162469381	3			AC012243	162469381		77279	0	0	77279
S/G/Y/R/B/O	NT_022463	AC131211	162469381	3			AC024905	162469381		27230	0	5511	32741
S/G/Y/R/B/O	NT_022463	AC117459	162543174	3	chr3	NT_022463	AC092940	162696792	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022463	AC117459	162543174	3			AC024905	162543174		81628	0	4404	86032
S/G/Y/R/B/O	NT_022463	AC117459	162543174	3			AC025818	162543174		69087	7674	8502	85263
S/G/Y/R/B/O	NT_022463	AC092940	162696792	3	chr3	NT_022463	AC092694	162857588	3	0	2004	0	2004
S/G/Y/R/B/O	NT_022463	AC092940	162696792	3			AC027294	162469381		16795	2866	6855	26516
S/G/Y/R/B/O	NT_022463	AC092940	162696792	3			AC040913	162469381		82813	14863	40001	137677
S/G/Y/R/B/O	NT_022463	AC092940	162696792	3			AC067898	162469381		53243	2587	0	55830
S/G/Y/R/B/O	NT_022463	AC092940	162696792	3			AC125619	162543174		55802	0	0	55802
S/G/Y/R/B/O	NT_022463	AC092940	162696792	3			AC125619	162543174		55802	0	0	55802
S/G/Y/R/B/O	NT_022463	AC092694	162857588	3	chr3	NT_022463	AC112906	163009137	3	0	0	0	0
S/G/Y/R/B/O	NT_022463	AC092694	162857588	3			AC024180	162543174		55082	3847	13583	72512
S/G/Y/R/B/O	NT_022463	AC092694	162857588	3			AC027294	162543174		18642	7395	11573	37610
S/G/Y/R/B/O	NT_022463	AC092694	162857588	3			AC040913	162543174		23245	0	0	23245
S/G/Y/R/B/O	NT_022463	AC092694	162857588	3			AC067898	162543174		42582	0	1344	43926
S/G/Y/R/B/O	NT_022463	AC092694	162857588	3			AC068191	162543174		24087	0	0	24087
S/G/Y/R/B/O	NT_022463	AC112906	163009137	3	chr3	NT_022463	AC128711	163124907	3	0	0	0	0
S/G/Y/R/B/O	NT_022463	AC112906	163009137	3			AC068191	162696792		31657	2948	23940	58545
S/G/Y/R/B/O	NT_022463	AC128711	163124907	3
S/G/Y/R/B/O	NT_022463	AC128711	163124907	3			AC022058	162696792		79752	0	6945	86697

NT_022594

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022594	AC128716	163227772	3	chr3	NT_022594	AC128690	163292703	3	0	0	0	0
S/G/Y/R/B/O	NT_022594	AC128690	163292703	3	chr3	NT_022594	AC007625	163455513	3	0	0	0	0
S/G/Y/R/B/O	NT_022594	AC128690	163292703	3	chr3	NT_022594	AC025826	163592060	1	49033	0	0	49033
S/G/Y/R/B/O	NT_022594	AC128690	163292703	3			AC009599	162696792		14008	0	0	14008
S/G/Y/R/B/O	NT_022594	AC128690	163292703	3			AC083825	163592060		24301	0	0	24301
S/G/Y/R/B/O	NT_022594	AC007625	163455513	3	chr3	NT_022594	AC025826	163592060	1	10599	0	0	10599
S/G/Y/R/B/O	NT_022594	AC007625	163455513	3			AC009599	163592060		33218	0	10400	43618
S/G/Y/R/B/O	NT_022594	AC007625	163455513	3			AC083825	163592060		38237	0	9480	47717
S/G/Y/R/B/O	NT_022594	AC025826	163592060	1	chr3	NT_022594	AC024106	163628959	3	54540	0	0	54540
S/G/Y/R/B/O	NT_022594	AC025826	163592060	1	chr3	NT_022594	AC128690	163292703	3	49033	0	0	49033
S/G/Y/R/B/O	NT_022594	AC025826	163592060	1			AC009599	163455513		34048	0	0	34048
S/G/Y/R/B/O	NT_022594	AC025826	163592060	1			AC083825	163628959		39612	482	0	40094
S/G/Y/R/B/O	NT_022594	AC024106	163628959	3	chr3	NT_022594	AC117443	163786482	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022594	AC024106	163628959	3			AC009599	163292703		110551	0	0	110551
S/G/Y/R/B/O	NT_022594	AC024106	163628959	3			AC083825	163592060		63547	0	20513	84060
S/G/Y/R/B/O	NT_022594	AC117443	163786482	3	chr3	NT_022594	AC128685	163806667	3	0	1936	0	1936
S/G/Y/R/B/O	NT_022594	AC117443	163786482	3			AC083825	163628959		21102	0	0	21102
S/G/Y/R/B/O	NT_022594	AC128685	163806667	3

NT_022421

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022421	AC112644	163911381	3	chr3	NT_022421	AC104513	164089902	3	0	0	0	0
S/G/Y/R/B/O	NT_022421	AC112644	163911381	3			AC024906	163786482		55365	0	20642	76007
S/G/Y/R/B/O	NT_022421	AC104513	164089902	3	chr3	NT_022421	AC079910	164185601	3	72612	0	0	72612
S/G/Y/R/B/O	NT_022421	AC104513	164089902	3			AC009922	163786482		47064	10662	1373	59099
S/G/Y/R/B/O	NT_022421	AC104513	164089902	3			AC024906	163786482		28711	0	4361	33072
S/G/Y/R/B/O	NT_022421	AC079910	164185601	3	chr3	NT_022421	AC104637	164280420	3	0	0	0	0
S/G/Y/R/B/O	NT_022421	AC079910	164185601	3			AC009922	164185601		37414	0	0	37414
S/G/Y/R/B/O	NT_022421	AC079910	164185601	3			AC021531	164185601		53965	2496	0	56461
S/G/Y/R/B/O	NT_022421	AC104637	164280420	3	chr3	NT_022421	AC112645	164378379	3	0	0	0	0
S/G/Y/R/B/O	NT_022421	AC104637	164280420	3			AC021531	164089902		80359	1764	1259	83382
S/G/Y/R/B/O	NT_022421	AC112645	164378379	3	chr3	NT_022421	AC092962	164380171	3	0	1616	0	1616
S/G/Y/R/B/O	NT_022421	AC112645	164378379	3			AC021531	164089902		37490	0	0	37490
S/G/Y/R/B/O	NT_022421	AC092962	164380171	3	chr3	NT_022421	AC112910	164553249	3	0	0	0	0
S/G/Y/R/B/O	NT_022421	AC092962	164380171	3			AC024666	164380171		100420	1779	30642	132841
S/G/Y/R/B/O	NT_022421	AC112910	164553249	3	chr3	NT_022421	AC084017	164660407	3	0	2000	0	2000
S/G/Y/R/B/O	NT_022421	AC112910	164553249	3			AC025015	164378379		44889	7181	7443	59513
S/G/Y/R/B/O	NT_022421	AC112910	164553249	3			AC078796	164378379		39160	0	27089	66249
S/G/Y/R/B/O	NT_022421	AC084017	164660407	3	chr3	NT_022421	AC018917	164825509	3	0	0	1687	1687
S/G/Y/R/B/O	NT_022421	AC084017	164660407	3			AC078796	164825509		31465	1769	14645	47879
S/G/Y/R/B/O	NT_022421	AC084017	164660407	3			AL135915	164553249		17464	2016	12781	32261
S/G/Y/R/B/O	NT_022421	AC084017	164660407	3			AL136118	164553249		67401	2649	8381	78431
S/G/Y/R/B/O	NT_022421	AC018917	164825509	3	chr3	NT_022421	AC018457	164864985	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022421	AC018457	164864985	3	chr3	NT_022421	AC117411	165038316	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022421	AC117411	165038316	3	chr3	NT_022421	AC110989	165160836	3	4124	0	0	4124
S/G/Y/R/B/O	NT_022421	AC117411	165038316	3			AC079309	164864985		23719	0	1627	25346
S/G/Y/R/B/O	NT_022421	AC110989	165160836	3	chr3	NT_022421	AC084235	165318232	3	0	1157	0	1157
S/G/Y/R/B/O	NT_022421	AC110989	165160836	3			AC011924	165160836		87393	5367	2661	95421
S/G/Y/R/B/O	NT_022421	AC110989	165160836	3			AC022036	165160836		19264	0	0	19264
S/G/Y/R/B/O	NT_022421	AC110989	165160836	3			AC055765	165160836		30453	2224	20161	52838
S/G/Y/R/B/O	NT_022421	AC110989	165160836	3			AC079309	165160836		55919	0	4525	60444
S/G/Y/R/B/O	NT_022421	AC110989	165160836	3			AC108680	165318232		73706	0	0	73706
S/G/Y/R/B/O	NT_022421	AC084235	165318232	3	chr3	NT_022421	AC112908	165489716	3	2032	0	0	2032
S/G/Y/R/B/O	NT_022421	AC084235	165318232	3			AC022036	165038316		53530	0	6621	60151
S/G/Y/R/B/O	NT_022421	AC084235	165318232	3			AC025527	165038316		69395	0	6791	76186
S/G/Y/R/B/O	NT_022421	AC084235	165318232	3			AC055765	165038316		24991	0	17459	42450
S/G/Y/R/B/O	NT_022421	AC112908	165489716	3	chr3	NT_022421	AC117429	165598985	3	0	1999	0	1999
S/G/Y/R/B/O	NT_022421	AC112908	165489716	3			AC025527	165489716		26291	11499	21275	59065
S/G/Y/R/B/O	NT_022421	AC117429	165598985	3	chr3	NT_022421	AC092695	165645866	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022421	AC092695	165645866	3
S/G/Y/R/B/O	NT_022421	AC092695	165645866	3			AC021100	165489716		77122	6483	63531	147136

NT_022518

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022518	AC013458	165910331	3	chr3	NT_022518	AC073289	166123863	1	0	0	0	0
S/G/Y/R/B/O	NT_022518	AC013458	165910331	3			AC104468	165598985		28143	0	0	28143
S/G/Y/R/B/O	NT_022518	AC073289	166123863	1	chr3	NT_022518	AC108675	166167478	3	0	0	0	0
S/G/Y/R/B/O	NT_022518	AC108675	166167478	3

NT_005638

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005638	AC055712	166366372	3	chr3	NT_005638	AC009811	166521428	3	53393	0	0	53393
S/G/Y/R/B/O	NT_005638	AC055712	166366372	3			AC048332	166521428		49298	0	12191	61489
S/G/Y/R/B/O	NT_005638	AC055712	166366372	3			AC055708	166521428		155055	0	0	155055
S/G/Y/R/B/O	NT_005638	AC055712	166366372	3			AC069210	166521428		32025	2832	35557	70414
S/G/Y/R/B/O	NT_005638	AC009811	166521428	3	chr3	NT_005638	AC110990	166638828	3	38772	0	0	38772
S/G/Y/R/B/O	NT_005638	AC009811	166521428	3			AC012587	166521428		38761	0	0	38761
S/G/Y/R/B/O	NT_005638	AC009811	166521428	3			AC048332	166521428		101526	2535	28799	132860
S/G/Y/R/B/O	NT_005638	AC009811	166521428	3			AC055708	166521428		53394	0	0	53394
S/G/Y/R/B/O	NT_005638	AC009811	166521428	3			AC069210	166366372		22578	0	14438	37016
S/G/Y/R/B/O	NT_005638	AC110990	166638828	3	chr3	NT_005638	AC018360	166655055	3	0	1366	0	1366
S/G/Y/R/B/O	NT_005638	AC110990	166638828	3			AC012587	166521428		53032	1508	0	54540
S/G/Y/R/B/O	NT_005638	AC110990	166638828	3			AC048332	166655055		32547	0	0	32547
S/G/Y/R/B/O	NT_005638	AC018360	166655055	3	chr3	NT_005638	AC134648	166833681	3	0	0	0	0
S/G/Y/R/B/O	NT_005638	AC018360	166655055	3			AC012587	166655055		81840	0	0	81840
S/G/Y/R/B/O	NT_005638	AC134648	166833681	3	chr3	NT_005638	AC117519	166862470	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005638	AC117519	166862470	3	chr3	NT_005638	AC104629	166903652	3	2000	0	0	2000
S/G/Y/R/B/O	NT_005638	AC104629	166903652	3	chr3	NT_005638	AC104470	167059876	3	0	1994	0	1994
S/G/Y/R/B/O	NT_005638	AC104629	166903652	3			AC013632	166833681		154840	0	2901	157741
S/G/Y/R/B/O	NT_005638	AC104629	166903652	3			AC068156	166833681		35554	0	0	35554
S/G/Y/R/B/O	NT_005638	AC104470	167059876	3	chr3	NT_005638	AC084016	167113743	3	0	0	0	0
S/G/Y/R/B/O	NT_005638	AC104470	167059876	3			AC013632	166862470		18305	0	0	18305
S/G/Y/R/B/O	NT_005638	AC104470	167059876	3			AC068156	166862470		19190	0	8523	27713
S/G/Y/R/B/O	NT_005638	AC104470	167059876	3			AC068158	166862470		33069	3995	0	37064
S/G/Y/R/B/O	NT_005638	AC084016	167113743	3	chr3	NT_005638	AC104469	167303266	3	0	1339	0	1339
S/G/Y/R/B/O	NT_005638	AC084016	167113743	3			AC068156	166903652		54715	0	0	54715
S/G/Y/R/B/O	NT_005638	AC084016	167113743	3			AC068158	166903652		54908	2662	1815	59385
S/G/Y/R/B/O	NT_005638	AC084016	167113743	3			AC068350	166903652		46705	0	0	46705
S/G/Y/R/B/O	NT_005638	AC084016	167113743	3			AC079862	166903652		62503	4881	5933	73317
S/G/Y/R/B/O	NT_005638	AC104469	167303266	3	chr3	NT_005638	AC072046	167320928	3	0	0	1847	1847
S/G/Y/R/B/O	NT_005638	AC104469	167303266	3			AC067865	167303266		15392	3170	0	18562
S/G/Y/R/B/O	NT_005638	AC072046	167320928	3	chr3	NT_005638	AC128686	167504928	3	2005	0	0	2005
S/G/Y/R/B/O	NT_005638	AC072046	167320928	3			AC067865	167113743		73484	0	16372	89856
S/G/Y/R/B/O	NT_005638	AC072046	167320928	3			AC068350	167113743		10047	0	41915	51962
S/G/Y/R/B/O	NT_005638	AC128686	167504928	3	chr3	NT_005638	AC069439	167591496	3	0	2005	0	2005
S/G/Y/R/B/O	NT_005638	AC069439	167591496	3	chr3	NT_005638	AC092965	167695981	3	0	0	0	0
S/G/Y/R/B/O	NT_005638	AC092965	167695981	3	chr3	NT_005638	AC112501	167881009	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005638	AC092965	167695981	3			AC068612	167504928		25865	0	63603	89468
S/G/Y/R/B/O	NT_005638	AC112501	167881009	3

NT_034563

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034563	AC117463	167980323	3	chr3	NT_034563	AC107311	168056584	3	0	1999	0	1999
S/G/Y/R/B/O	NT_034563	AC107311	168056584	3	chr3	NT_034563	AC069530	168248817	3	2009	0	0	2009
S/G/Y/R/B/O	NT_034563	AC069530	168248817	3	chr3	NT_034563	AC117425	168258533	3	0	0	0	0
S/G/Y/R/B/O	NT_034563	AC117425	168258533	3	chr3	NT_034563	AC079822	168400154	3	0	0	0	0
S/G/Y/R/B/O	NT_034563	AC079822	168400154	3	chr3	NT_034563	AC026353	168579823	3	2000	0	0	2000
S/G/Y/R/B/O	NT_034563	AC079822	168400154	3			AC024891	168056584		52174	0	0	52174
S/G/Y/R/B/O	NT_034563	AC026353	168579823	3	chr3	NT_034563	AC128713	168716135	3	0	0	1798	1798
S/G/Y/R/B/O	NT_034563	AC026353	168579823	3			AC024891	168579823		73437	0	9334	82771
S/G/Y/R/B/O	NT_034563	AC128713	168716135	3	chr3	NT_034563	AC117467	168740115	3	0	0	0	0
S/G/Y/R/B/O	NT_034563	AC117467	168740115	3	chr3	NT_034563	AC069243	168830115	3	0	0	1841	1841
S/G/Y/R/B/O	NT_034563	AC069243	168830115	3	chr3	NT_034563	AC124893	169019023	3	2004	0	0	2004
S/G/Y/R/B/O	NT_034563	AC069243	168830115	3			AC016863	168830115		38155	1773	0	39928
S/G/Y/R/B/O	NT_034563	AC069243	168830115	3			AC027705	168830115		19171	1643	1200	22014
S/G/Y/R/B/O	NT_034563	AC069243	168830115	3			AC092950	168830115		18557	0	0	18557
S/G/Y/R/B/O	NT_034563	AC124893	169019023	3	chr3	NT_034563	AC061710	169117114	3	2005	0	0	2005
S/G/Y/R/B/O	NT_034563	AC124893	169019023	3			AC009862	152736861		12641	0	0	12641
S/G/Y/R/B/O	NT_034563	AC124893	169019023	3			AC016863	152736861		89119	2836	2170	94125
S/G/Y/R/B/O	NT_034563	AC124893	169019023	3			AC027705	152736861		93995	5007	0	99002
S/G/Y/R/B/O	NT_034563	AC124893	169019023	3			AC092950	168830115		97011	0	2679	99690
S/G/Y/R/B/O	NT_034563	AC124893	169019023	3			AC130440	168830115		67741	0	0	67741
S/G/Y/R/B/O	NT_034563	AC124893	169019023	3			AL355364	168830115		47442	4169	13733	65344
S/G/Y/R/B/O	NT_034563	AC061710	169117114	3	chr3	NT_034563	AC018356	169302766	3	0	1995	0	1995
S/G/Y/R/B/O	NT_034563	AC061710	169117114	3			AC009862	152736861		83126	2080	101650	186856
S/G/Y/R/B/O	NT_034563	AC061710	169117114	3			AC011321	152736861		47291	0	0	47291
S/G/Y/R/B/O	NT_034563	AC061710	169117114	3			AC027705	169302766		73831	6251	0	80082
S/G/Y/R/B/O	NT_034563	AC061710	169117114	3			AC092950	169302766		59264	2356	18243	79863
S/G/Y/R/B/O	NT_034563	AC061710	169117114	3			AL355364	169019023		21708	2221	3978	27907
S/G/Y/R/B/O	NT_034563	AC018356	169302766	3	chr3	NT_034563	AC112911	169421617	3	0	1952	0	1952
S/G/Y/R/B/O	NT_034563	AC018356	169302766	3			AC011321	169019023		22249	0	16245	38494
S/G/Y/R/B/O	NT_034563	AC018356	169302766	3			AC040973	169019023		56682	0	25485	82167
S/G/Y/R/B/O	NT_034563	AC112911	169421617	3	chr3	NT_034563	AC058333	169521080	3	0	1795	0	1795
S/G/Y/R/B/O	NT_034563	AC112911	169421617	3			AC040973	169302766		54819	2713	21865	79397
S/G/Y/R/B/O	NT_034563	AC112911	169421617	3			AC055759	169302766		12776	0	0	12776
S/G/Y/R/B/O	NT_034563	AC112911	169421617	3			AC069414	21358085		55617	4464	22525	82606
S/G/Y/R/B/O	NT_034563	AC058333	169521080	3	chr3	NT_034563	AC092954	169593283	3	0	1555	0	1555
S/G/Y/R/B/O	NT_034563	AC058333	169521080	3	chr3	NT_022517	AC063935	21358085	1	16195	11282	3219	30696
S/G/Y/R/B/O	NT_034563	AC058333	169521080	3			AC055759	21358085		73998	0	0	73998
S/G/Y/R/B/O	NT_034563	AC058333	169521080	3			AC069414	21358085		16341	0	22915	39256
S/G/Y/R/B/O	NT_034563	AC092954	169593283	3	chr3	NT_034563	AC092932	169758180	3	0	0	1666	1666
S/G/Y/R/B/O	NT_034563	AC092954	169593283	3			AC026080	169421617		87613	5869	23998	117480
S/G/Y/R/B/O	NT_034563	AC092954	169593283	3			AC046139	169421617		53341	0	22090	75431
S/G/Y/R/B/O	NT_034563	AC092954	169593283	3			AC055759	169421617		25424	0	0	25424
S/G/Y/R/B/O	NT_034563	AC092954	169593283	3			AC069414	21358085		16494	0	0	16494
S/G/Y/R/B/O	NT_034563	AC092932	169758180	3	chr3	NT_034563	AC007480	169793579	1	35371	0	0	35371
S/G/Y/R/B/O	NT_034563	AC092932	169758180	3			AC130425	169593283		35366	0	0	35366
S/G/Y/R/B/O	NT_034563	AC007480	169793579	1	chr3	NT_034563	AC078985	169797403	3	87345	7653	29057	124055
S/G/Y/R/B/O	NT_034563	AC007480	169793579	1			AC046139	169593283		39052	0	0	39052
S/G/Y/R/B/O	NT_034563	AC007480	169793579	1			AC130425	169758180		154832	9263	5333	169428
S/G/Y/R/B/O	NT_034563	AC078985	169797403	3	chr3	NT_034563	AC024099	169978385	3	2000	0	0	2000
S/G/Y/R/B/O	NT_034563	AC078985	169797403	3			AC130425	169978385		80026	2587	27630	110243
S/G/Y/R/B/O	NT_034563	AC024099	169978385	3	chr3	NT_034563	AC069220	170023444	3	0	1999	0	1999
S/G/Y/R/B/O	NT_034563	AC024099	169978385	3			AC067720	169978385		47001	0	0	47001
S/G/Y/R/B/O	NT_034563	AC069220	170023444	3	chr3	NT_034563	AC074033	170178892	3	2006	0	0	2006
S/G/Y/R/B/O	NT_034563	AC069220	170023444	3			AC000054	169797403		64185	0	0	64185
S/G/Y/R/B/O	NT_034563	AC069220	170023444	3			AC010940	169797403		139795	0	0	139795
S/G/Y/R/B/O	NT_034563	AC069220	170023444	3			AC069510	169978385		142256	0	14036	156292
S/G/Y/R/B/O	NT_034563	AC069220	170023444	3			AL391414	170178892		17796	0	0	17796
S/G/Y/R/B/O	NT_034563	AC069220	170023444	3			AL445424	170178892		18595	23023	0	41618
S/G/Y/R/B/O	NT_034563	AC074033	170178892	3	chr3	NT_034563	AC007849	170304831	3	2005	0	0	2005
S/G/Y/R/B/O	NT_034563	AC007849	170304831	3	chr3	NT_034563	AC078802	170401369	1	0	0	0	0
S/G/Y/R/B/O	NT_034563	AC007849	170304831	3			AC114305	170178892		64762	0	0	64762
S/G/Y/R/B/O	NT_034563	AC078802	170401369	1	chr3	NT_034563	AC078795	170541901	3	5293	0	0	5293
S/G/Y/R/B/O	NT_034563	AC078795	170541901	3	chr3	NT_034563	AC008040	170667346	3	0	1999	0	1999
S/G/Y/R/B/O	NT_034563	AC008040	170667346	3	chr3	NT_034563	AC023891	170870264	3	0	1995	0	1995
S/G/Y/R/B/O	NT_034563	AC023891	170870264	3	chr3	NT_034563	AC073288	171010458	3	0	1998	0	1998
S/G/Y/R/B/O	NT_034563	AC023891	170870264	3			AC044856	170667346		10392	10429	3203	24024
S/G/Y/R/B/O	NT_034563	AC073288	171010458	3	chr3	NT_034563	AC008041	171182478	3	2005	0	0	2005
S/G/Y/R/B/O	NT_034563	AC073288	171010458	3			AC044856	170870264		54041	12417	9483	75941
S/G/Y/R/B/O	NT_034563	AC008041	171182478	3	chr3	NT_034563	AC117446	171248161	1	113194	0	0	113194
S/G/Y/R/B/O	NT_034563	AC117446	171248161	1	chr3	NT_034563	AC026316	171361370	3	42983	0	0	42983
S/G/Y/R/B/O	NT_034563	AC117446	171248161	1			AC026094	171182478		33231	0	8768	41999
S/G/Y/R/B/O	NT_034563	AC026316	171361370	3	chr3	NT_034563	AC092955	171525779	3	0	1999	0	1999
S/G/Y/R/B/O	NT_034563	AC026316	171361370	3			AC026094	171361370		64050	2172	8768	74990
S/G/Y/R/B/O	NT_034563	AC092955	171525779	3	chr3	NT_034563	AC117476	171533419	3	0	0	1050	1050
S/G/Y/R/B/O	NT_034563	AC117476	171533419	3	chr3	NT_034563	AC061708	171623883	3	2323	0	0	2323
S/G/Y/R/B/O	NT_034563	AC061708	171623883	3	chr3	NT_034563	AC092918	171788538	3	2000	0	0	2000
S/G/Y/R/B/O	NT_034563	AC061708	171623883	3			AC023238	171525779		146625	0	529	147154
S/G/Y/R/B/O	NT_034563	AC061708	171623883	3			AC068853	171525779		94238	0	1266	95504
S/G/Y/R/B/O	NT_034563	AC092918	171788538	3	chr3	NT_034563	AC026315	171818172	3	2004	0	0	2004
S/G/Y/R/B/O	NT_034563	AC092918	171788538	3			AC023238	171533419		31627	0	0	31627
S/G/Y/R/B/O	NT_034563	AC092918	171788538	3			AC068853	171623883		31534	0	0	31534
S/G/Y/R/B/O	NT_034563	AC026315	171818172	3
S/G/Y/R/B/O	NT_034563	AC026315	171818172	3			AC098564	171788538		37841	0	361	38202

NT_025667

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_025667	AC078793	171909667	3	chr3	NT_025667	AC092919	172062496	3	0	1999	0	1999
S/G/Y/R/B/O	NT_025667	AC078793	171909667	3			AC025027	171788538		120356	9772	9608	139736
S/G/Y/R/B/O	NT_025667	AC078793	171909667	3			AC098564	172062496		42511	0	25054	67565
S/G/Y/R/B/O	NT_025667	AC092919	172062496	3	chr3	NT_025667	AC008134	172161617	3	0	2013	0	2013
S/G/Y/R/B/O	NT_025667	AC092919	172062496	3			AC026321	172161617		11989	0	0	11989
S/G/Y/R/B/O	NT_025667	AC008134	172161617	3	chr3	NT_025667	AC078953	172334735	3	0	0	0	0
S/G/Y/R/B/O	NT_025667	AC008134	172161617	3			AC024714	171909667		50001	0	0	50001
S/G/Y/R/B/O	NT_025667	AC008134	172161617	3			AC026321	171909667		62113	0	32947	95060
S/G/Y/R/B/O	NT_025667	AC078953	172334735	3	chr3	NT_025667	AC055714	172492401	3	0	1999	0	1999
S/G/Y/R/B/O	NT_025667	AC055714	172492401	3	chr3	NT_025667	AC069259	172658190	3	2000	0	0	2000
S/G/Y/R/B/O	NT_025667	AC055714	172492401	3			AC016783	172492401		75465	4460	39081	119006
S/G/Y/R/B/O	NT_025667	AC055714	172492401	3			AC026312	172492401		30415	0	0	30415
S/G/Y/R/B/O	NT_025667	AC055714	172492401	3			AC026322	172492401		79454	0	31317	110771
S/G/Y/R/B/O	NT_025667	AC055714	172492401	3			AC073354	172658190		167752	0	0	167752
S/G/Y/R/B/O	NT_025667	AC055714	172492401	3			AC108712	172334735		31146	0	5329	36475
S/G/Y/R/B/O	NT_025667	AC069259	172658190	3	chr3	NT_025667	AC108668	172822720	1	50132	0	0	50132
S/G/Y/R/B/O	NT_025667	AC069259	172658190	3			AC016783	172334735		10870	2466	0	13336
S/G/Y/R/B/O	NT_025667	AC069259	172658190	3			AC020649	172334735		116252	0	24875	141127
S/G/Y/R/B/O	NT_025667	AC069259	172658190	3			AC026312	172334735		119053	0	0	119053
S/G/Y/R/B/O	NT_025667	AC108668	172822720	1	chr3	NT_025667	AC092964	172897416	3	83409	0	0	83409
S/G/Y/R/B/O	NT_025667	AC108668	172822720	1			AC020649	172822720		31157	0	14233	45390
S/G/Y/R/B/O	NT_025667	AC092964	172897416	3	chr3	NT_025667	AC069523	173010436	3	0	1974	0	1974
S/G/Y/R/B/O	NT_025667	AC069523	173010436	3	chr3	NT_025667	AC016938	173156029	3	0	0	852	852
S/G/Y/R/B/O	NT_025667	AC069523	173010436	3			AC015655	172822720		16048	0	128945	144993
S/G/Y/R/B/O	NT_025667	AC016938	173156029	3	chr3	NT_025667	AC007051	173195949	3	0	0	33107	33107
S/G/Y/R/B/O	NT_025667	AC007051	173195949	3	chr3	NT_025667	AC007919	173330516	3	135897	0	0	135897
S/G/Y/R/B/O	NT_025667	AC007919	173330516	3	chr3	NT_025667	AC069237	173379512	1	36941	4767	18567	60275
S/G/Y/R/B/O	NT_025667	AC069237	173379512	1	chr3	NT_025667	AC108667	173454892	3	10820	0	22320	33140
S/G/Y/R/B/O	NT_025667	AC108667	173454892	3	chr3	NT_025667	AC092948	173583548	3	2012	0	0	2012
S/G/Y/R/B/O	NT_025667	AC092948	173583548	3	chr3	NT_025667	AC063933	173728126	3	0	2000	0	2000
S/G/Y/R/B/O	NT_025667	AC092948	173583548	3			AC026284	173583548		64166	26280	18920	109366
S/G/Y/R/B/O	NT_025667	AC063933	173728126	3	chr3	NT_025667	AC068758	173894506	3	0	0	0	0
S/G/Y/R/B/O	NT_025667	AC063933	173728126	3			AC026284	173454892		13152	1895	0	15047
S/G/Y/R/B/O	NT_025667	AC068758	173894506	3	chr3	NT_025667	AC068759	173935908	3	2000	0	0	2000
S/G/Y/R/B/O	NT_025667	AC068758	173894506	3			AC053521	173583548		10510	0	8820	19330
S/G/Y/R/B/O	NT_025667	AC068758	173894506	3			AC092930	173935908		10196	0	28089	38285
S/G/Y/R/B/O	NT_025667	AC068758	173894506	3			AC092949	173935908		18695	0	0	18695
S/G/Y/R/B/O	NT_025667	AC068759	173935908	3	chr3	NT_025667	AC018456	174117265	3	4005	0	0	4005
S/G/Y/R/B/O	NT_025667	AC068759	173935908	3			AC026287	174117265		43534	0	23436	66970
S/G/Y/R/B/O	NT_025667	AC018456	174117265	3	chr3	NT_025667	AC069531	174233710	1	7807	0	6553	14360
S/G/Y/R/B/O	NT_025667	AC018456	174117265	3			AC012082	173894506		114602	0	0	114602
S/G/Y/R/B/O	NT_025667	AC069531	174233710	1	chr3	NT_025667	AC092935	174273877	3	0	0	0	0
S/G/Y/R/B/O	NT_025667	AC069531	174233710	1	chr3	NT_025667	AC092967	174293578	3	76998	0	4196	81194
S/G/Y/R/B/O	NT_025667	AC069531	174233710	1			AC012082	174233710		30203	0	6550	36753
S/G/Y/R/B/O	NT_025667	AC069531	174233710	1			AC026099	174117265		30049	3927	13831	47807
S/G/Y/R/B/O	NT_025667	AC069531	174233710	1			AC026870	174117265		73144	1780	0	74924
S/G/Y/R/B/O	NT_025667	AC092935	174273877	3	chr3	NT_025667	AC092967	174293578	3	2011	0	0	2011
S/G/Y/R/B/O	NT_025667	AC092967	174293578	3	chr3	NT_025667	AC092923	174471415	3	2006	0	0	2006
S/G/Y/R/B/O	NT_025667	AC092967	174293578	3	chr3	NT_025667	AC069531	174233710	1	76998	0	4196	81194
S/G/Y/R/B/O	NT_025667	AC092967	174293578	3			AC026099	174293578		80063	4059	17859	101981
S/G/Y/R/B/O	NT_025667	AC092967	174293578	3			AC026870	174293578		166340	1780	9974	178094
S/G/Y/R/B/O	NT_025667	AC092923	174471415	3	chr3	NT_025667	AC110871	174619625	3	2005	0	0	2005
S/G/Y/R/B/O	NT_025667	AC110871	174619625	3	chr3	NT_025667	AC131158	174714730	3	0	1922	0	1922
S/G/Y/R/B/O	NT_025667	AC110871	174619625	3			AC092921	174619625		41369	14169	18271	73809
S/G/Y/R/B/O	NT_025667	AC131158	174714730	3	chr3	NT_025667	AC008082	174732809	3	0	1552	0	1552
S/G/Y/R/B/O	NT_025667	AC131158	174714730	3			AC021870	174732809		19993	0	0	19993
S/G/Y/R/B/O	NT_025667	AC131158	174714730	3			AC092921	174732809		18052	1377	0	19429
S/G/Y/R/B/O	NT_025667	AC008082	174732809	3	chr3	NT_025667	AC008120	174902876	3	0	0	286	286
S/G/Y/R/B/O	NT_025667	AC008082	174732809	3			AC021870	174902876		116102	0	8284	124386
S/G/Y/R/B/O	NT_025667	AC008082	174732809	3			AC073285	174902876		76875	0	75702	152577
S/G/Y/R/B/O	NT_025667	AC008082	174732809	3			AC092921	174902876		33900	10456	0	44356
S/G/Y/R/B/O	NT_025667	AC008120	174902876	3	chr3	NT_025667	AC069218	175041369	3	2003	0	0	2003
S/G/Y/R/B/O	NT_025667	AC008120	174902876	3			AC068637	174732809		44794	0	0	44794
S/G/Y/R/B/O	NT_025667	AC069218	175041369	3	chr3	NT_025667	AC117431	175203370	3	0	0	1853	1853
S/G/Y/R/B/O	NT_025667	AC069218	175041369	3			AC068637	174902876		118506	0	0	118506
S/G/Y/R/B/O	NT_025667	AC117431	175203370	3	chr3	NT_025667	AC063953	175214840	3	0	1998	0	1998
S/G/Y/R/B/O	NT_025667	AC063953	175214840	3	chr3	NT_025667	AC069427	175400099	3	2000	0	0	2000
S/G/Y/R/B/O	NT_025667	AC063953	175214840	3			AC016936	175041369		67986	0	0	67986
S/G/Y/R/B/O	NT_025667	AC069427	175400099	3	chr3	NT_025667	AC069418	175531956	3	0	1030	0	1030
S/G/Y/R/B/O	NT_025667	AC069427	175400099	3			AC016936	175203370		54497	0	31777	86274
S/G/Y/R/B/O	NT_025667	AC069427	175400099	3			AC063954	175214840		32789	2564	25698	61051
S/G/Y/R/B/O	NT_025667	AC069418	175531956	3	chr3	NT_025667	AC078803	175677862	1	43083	0	18975	62058
S/G/Y/R/B/O	NT_025667	AC069418	175531956	3			AC063954	175531956		42716	0	3481	46197
S/G/Y/R/B/O	NT_025667	AC078803	175677862	1	chr3	NT_025667	AC112510	175736147	1	34277	2132	4931	41340
S/G/Y/R/B/O	NT_025667	AC078803	175677862	1			AC063954	175677862		22390	0	6809	29199
S/G/Y/R/B/O	NT_025667	AC112510	175736147	1	chr3	NT_025667	AC135037	175945389	3	0	0	22852	22852
S/G/Y/R/B/O	NT_025667	AC112510	175736147	1			AC021681	175736147		38115	3995	7356	49466
S/G/Y/R/B/O	NT_025667	AC112510	175736147	1			AC107615	175677862		42170	0	4399	46569
S/G/Y/R/B/O	NT_025667	AC112510	175736147	1			AC113929	195361336		54590	4447	19187	78224
S/G/Y/R/B/O	NT_025667	AC135037	175945389	3	chr3	NT_025667	AC119732	176052677	3	2004	0	0	2004
S/G/Y/R/B/O	NT_025667	AC135037	175945389	3			AC021681	175945389		68784	3809	2546	75139
S/G/Y/R/B/O	NT_025667	AC135037	175945389	3			AC021681	175945389		68784	3809	2546	75139
S/G/Y/R/B/O	NT_025667	AC135037	175945389	3			AC107615	175945389		44967	0	39338	84305
S/G/Y/R/B/O	NT_025667	AC135037	175945389	3			AC107615	175945389		44967	0	39338	84305
S/G/Y/R/B/O	NT_025667	AC135037	175945389	3			AC113929	175736147		13250	4307	6133	23690
S/G/Y/R/B/O	NT_025667	AC135037	175945389	3			AC113929	175736147		13250	4307	6133	23690
S/G/Y/R/B/O	NT_025667	AC119732	176052677	3	chr3	NT_025667	AC008180	176141360	3	0	0	0	0
S/G/Y/R/B/O	NT_025667	AC119732	176052677	3			AC107615	176052677		30424	0	0	30424
S/G/Y/R/B/O	NT_025667	AC008180	176141360	3	chr3	NT_025667	AC083804	176334395	3	2001	0	0	2001
S/G/Y/R/B/O	NT_025667	AC083804	176334395	3	chr3	NT_025667	AC119744	176439373	3	2058	0	0	2058
S/G/Y/R/B/O	NT_025667	AC119744	176439373	3	chr3	NT_025667	AC119040	176535691	3	2004	0	0	2004
S/G/Y/R/B/O	NT_025667	AC119744	176439373	3			AL354922	176535691		78627	0	3989	82616
S/G/Y/R/B/O	NT_025667	AC119040	176535691	3	chr3	NT_025667	AC104150	176571075	3	0	0	0	0
S/G/Y/R/B/O	NT_025667	AC119040	176535691	3			AL354922	176439373		11892	1316	11458	24666
S/G/Y/R/B/O	NT_025667	AC104150	176571075	3	chr3	NT_025667	AC104640	176731925	3	0	0	0	0
S/G/Y/R/B/O	NT_025667	AC104150	176571075	3			AC068566	176439373		12671	0	0	12671
S/G/Y/R/B/O	NT_025667	AC104150	176571075	3			AL354922	176439373		26269	2020	0	28289
S/G/Y/R/B/O	NT_025667	AC104640	176731925	3	chr3	NT_025667	AC117434	176885388	3	0	0	0	0
S/G/Y/R/B/O	NT_025667	AC104640	176731925	3			AC068566	176439373		24485	8639	33262	66386
S/G/Y/R/B/O	NT_025667	AC117434	176885388	3	chr3	NT_025667	AC078981	176925637	3	2001	0	0	2001
S/G/Y/R/B/O	NT_025667	AC078981	176925637	3	chr3	NT_025667	AC092970	177084213	3	2106	0	0	2106
S/G/Y/R/B/O	NT_025667	AC092970	177084213	3

NT_022509

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022509	AC092963	177163108	3	chr3	NT_022509	AC092938	177308498	3	0	0	0	0
S/G/Y/R/B/O	NT_022509	AC092963	177163108	3			AC023222	176925637		95626	0	0	95626
S/G/Y/R/B/O	NT_022509	AC092938	177308498	3	chr3	NT_022509	AC126469	177471221	3	0	0	0	0
S/G/Y/R/B/O	NT_022509	AC092938	177308498	3			AC019160	176925637		53613	0	59079	112692
S/G/Y/R/B/O	NT_022509	AC126469	177471221	3	chr3	NT_022509	AC092920	177577409	3	2006	0	0	2006
S/G/Y/R/B/O	NT_022509	AC126469	177471221	3			AC024473	176925637		89499	0	0	89499
S/G/Y/R/B/O	NT_022509	AC126469	177471221	3			AC024473	176925637		89499	0	0	89499
S/G/Y/R/B/O	NT_022509	AC092920	177577409	3	chr3	NT_022509	AC117445	177742287	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022509	AC092920	177577409	3			AC024233	177577409		28512	0	42648	71160
S/G/Y/R/B/O	NT_022509	AC117445	177742287	3	chr3	NT_022509	AC023235	177770146	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022509	AC117445	177742287	3			AC136599	177577409		17736	0	0	17736
S/G/Y/R/B/O	NT_022509	AC023235	177770146	3	chr3	NT_022509	AC078799	177939779	3	2055	0	0	2055
S/G/Y/R/B/O	NT_022509	AC023235	177770146	3			AC136599	177742287		116640	0	0	116640
S/G/Y/R/B/O	NT_022509	AC078799	177939779	3	chr3	NT_022509	AC117465	178023790	3	0	0	0	0
S/G/Y/R/B/O	NT_022509	AC117465	178023790	3	chr3	NT_022509	AC026325	178217021	3	0	1998	0	1998
S/G/Y/R/B/O	NT_022509	AC026325	178217021	3	chr3	NT_022509	AC026355	178379125	3	0	0	1831	1831
S/G/Y/R/B/O	NT_022509	AC026325	178217021	3			AC074268	178379125		23144	0	13414	36558
S/G/Y/R/B/O	NT_022509	AC026325	178217021	3			AC136602	178023790		11177	2566	9164	22907
S/G/Y/R/B/O	NT_022509	AC026355	178379125	3	chr3	NT_022509	AC026311	178534561	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022509	AC026355	178379125	3			AC026317	178534561		157330	0	0	157330
S/G/Y/R/B/O	NT_022509	AC026355	178379125	3			AC074268	178217021		35907	0	10434	46341
S/G/Y/R/B/O	NT_022509	AC026355	178379125	3			AC136602	178217021		117071	0	0	117071
S/G/Y/R/B/O	NT_022509	AC026311	178534561	3	chr3	NT_022509	AC112136	178553402	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022509	AC026311	178534561	3			AC026317	178217021		20836	0	0	20836
S/G/Y/R/B/O	NT_022509	AC026311	178534561	3			AC136602	178553402		10617	0	0	10617
S/G/Y/R/B/O	NT_022509	AC112136	178553402	3	chr3	NT_022509	AC012031	178595105	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022509	AC112136	178553402	3			AC136602	178534561		20012	0	0	20012
S/G/Y/R/B/O	NT_022509	AC012031	178595105	3	chr3	NT_022509	AC007953	178750740	3	49472	0	0	49472
S/G/Y/R/B/O	NT_022509	AC007953	178750740	3	chr3	NT_022509	AC103549	178853462	3	102716	0	0	102716
S/G/Y/R/B/O	NT_022509	AC103549	178853462	3	chr3	NT_022509	AC110992	178915880	3	0	0	0	0
S/G/Y/R/B/O	NT_022509	AC103549	178853462	3			AC024387	178750740		32386	0	1539	33925
S/G/Y/R/B/O	NT_022509	AC110992	178915880	3	chr3	NT_022509	AC117453	179003286	3	0	0	1771	1771
S/G/Y/R/B/O	NT_022509	AC110992	178915880	3			AC024387	178750740		119784	4103	7665	131552
S/G/Y/R/B/O	NT_022509	AC117453	179003286	3	chr3	NT_022509	AC109779	179092389	3	2158	0	0	2158
S/G/Y/R/B/O	NT_022509	AC109779	179092389	3	chr3	NT_022509	AC024220	179179393	3	0	0	0	0
S/G/Y/R/B/O	NT_022509	AC109779	179092389	3			AC012244	178915880		60425	2067	17286	79778
S/G/Y/R/B/O	NT_022509	AC109779	179092389	3			AC013808	178915880		42105	0	0	42105
S/G/Y/R/B/O	NT_022509	AC024220	179179393	3	chr3	NT_022509	AC092929	179360321	3	2001	0	0	2001
S/G/Y/R/B/O	NT_022509	AC024220	179179393	3			AC012244	179003286		64794	0	0	64794
S/G/Y/R/B/O	NT_022509	AC024220	179179393	3			AC013808	179003286		88068	2545	5097	95710
S/G/Y/R/B/O	NT_022509	AC024220	179179393	3			AC015495	179003286		138069	1872	1322	141263
S/G/Y/R/B/O	NT_022509	AC024220	179179393	3			AC021975	179003286		65943	0	0	65943
S/G/Y/R/B/O	NT_022509	AC024220	179179393	3			AC130412	179360321		38585	2673	52478	93736
S/G/Y/R/B/O	NT_022509	AC092929	179360321	3

NT_034565

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_034565	AC117456	179488390	3
S/G/Y/R/B/O	NT_034565	AC117456	179488390	3			AC067992	179179393		13984	0	804	14788

NT_022396

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022396	AC076966	179671693	1	chr3	NT_022396	AC007823	179808231	3	0	0	49122	49122
S/G/Y/R/B/O	NT_022396	AC076966	179671693	1			AC067992	179808231		65799	15307	5375	86481
S/G/Y/R/B/O	NT_022396	AC007823	179808231	3	chr3	NT_022396	AC007620	179935990	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022396	AC007620	179935990	3	chr3	NT_022396	AC090425	180108050	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC007620	179935990	3			AC079618	179808231		34632	14947	43537	93116
S/G/Y/R/B/O	NT_022396	AC090425	180108050	3	chr3	NT_022396	AC125604	180201906	3	0	2004	0	2004
S/G/Y/R/B/O	NT_022396	AC090425	180108050	3			AC125619	180201906		34550	0	22842	57392
S/G/Y/R/B/O	NT_022396	AC090425	180108050	3			AC125619	180201906		34550	0	22842	57392
S/G/Y/R/B/O	NT_022396	AC090425	180108050	3			AC125619	180201906		34550	0	22842	57392
S/G/Y/R/B/O	NT_022396	AC090425	180108050	3			AC125619	180201906		34550	0	22842	57392
S/G/Y/R/B/O	NT_022396	AC090425	180108050	3			AC126184	180201906		22193	0	6849	29042
S/G/Y/R/B/O	NT_022396	AC090425	180108050	3			AC126184	180201906		22193	0	6849	29042
S/G/Y/R/B/O	NT_022396	AC125604	180201906	3	chr3	NT_022396	AC007687	180260724	3	3005	0	0	3005
S/G/Y/R/B/O	NT_022396	AC125604	180201906	3			AC015620	180260724		22605	1576	0	24181
S/G/Y/R/B/O	NT_022396	AC125604	180201906	3			AC015620	180260724		22605	1576	0	24181
S/G/Y/R/B/O	NT_022396	AC125604	180201906	3			AC125619	180108050		22835	0	36900	59735
S/G/Y/R/B/O	NT_022396	AC125604	180201906	3			AC125619	180108050		22835	0	36900	59735
S/G/Y/R/B/O	NT_022396	AC125604	180201906	3			AC125619	180108050		22835	0	36900	59735
S/G/Y/R/B/O	NT_022396	AC125604	180201906	3			AC125619	180108050		22835	0	36900	59735
S/G/Y/R/B/O	NT_022396	AC007687	180260724	3	chr3	NT_022396	AC092939	180425377	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC007687	180260724	3			AC015620	180108050		15097	0	63853	78950
S/G/Y/R/B/O	NT_022396	AC007687	180260724	3			AC048335	180108050		72735	2229	27165	102129
S/G/Y/R/B/O	NT_022396	AC007687	180260724	3			AC073147	180108050		30398	0	0	30398
S/G/Y/R/B/O	NT_022396	AC007687	180260724	3			AC125619	180201906		23167	0	4229	27396
S/G/Y/R/B/O	NT_022396	AC007687	180260724	3			AC125619	180201906		23167	0	4229	27396
S/G/Y/R/B/O	NT_022396	AC092939	180425377	3	chr3	NT_022396	AC090024	180590522	3	0	2003	0	2003
S/G/Y/R/B/O	NT_022396	AC092939	180425377	3			AC007653	180201906		38355	0	0	38355
S/G/Y/R/B/O	NT_022396	AC092939	180425377	3			AC069201	180201906		10187	1352	3618	15157
S/G/Y/R/B/O	NT_022396	AC092939	180425377	3			AC073147	180201906		147501	2482	15122	165105
S/G/Y/R/B/O	NT_022396	AC092939	180425377	3			AC074352	180201906		101911	0	39839	141750
S/G/Y/R/B/O	NT_022396	AC092939	180425377	3			AC092928	180590522		142030	0	0	142030
S/G/Y/R/B/O	NT_022396	AC090024	180590522	3	chr3	NT_022396	AC117418	180692905	3	2001	0	0	2001
S/G/Y/R/B/O	NT_022396	AC090024	180590522	3			AC069201	180590522		46319	4413	23203	73935
S/G/Y/R/B/O	NT_022396	AC090024	180590522	3			AC092928	180590522		18512	0	0	18512
S/G/Y/R/B/O	NT_022396	AC117418	180692905	3	chr3	NT_022396	AC134503	180743181	3	0	1389	0	1389
S/G/Y/R/B/O	NT_022396	AC117418	180692905	3			AC073277	180692905		13763	3618	7958	25339
S/G/Y/R/B/O	NT_022396	AC117418	180692905	3			AC079139	180692905		51308	0	458	51766
S/G/Y/R/B/O	NT_022396	AC134503	180743181	3	chr3	NT_022396	AC068760	180814969	3	2013	0	0	2013
S/G/Y/R/B/O	NT_022396	AC068760	180814969	3	chr3	NT_022396	AC104466	181008177	3	0	1996	0	1996
S/G/Y/R/B/O	NT_022396	AC068760	180814969	3			AC073277	180692905		25448	1726	8134	35308
S/G/Y/R/B/O	NT_022396	AC068760	180814969	3			AC079139	180692905		15364	0	0	15364
S/G/Y/R/B/O	NT_022396	AC104466	181008177	3	chr3	NT_022396	AC125618	181091727	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC104466	181008177	3			AC025999	180743181		12044	0	14646	26690
S/G/Y/R/B/O	NT_022396	AC125618	181091727	3	chr3	NT_022396	AC068298	181147832	3	2005	0	0	2005
S/G/Y/R/B/O	NT_022396	AC125618	181091727	3			AC025999	180814969		22941	0	2693	25634
S/G/Y/R/B/O	NT_022396	AC068298	181147832	3	chr3	NT_022396	AC108734	181326162	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC068298	181147832	3			AC025999	181147832		42880	2748	2600	48228
S/G/Y/R/B/O	NT_022396	AC108734	181326162	3	chr3	NT_022396	AC068638	181448108	3	2039	0	0	2039
S/G/Y/R/B/O	NT_022396	AC068638	181448108	3	chr3	NT_022396	AC008009	181465604	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC008009	181465604	3	chr3	NT_022396	AC083904	181677948	3	0	1495	0	1495
S/G/Y/R/B/O	NT_022396	AC008009	181465604	3			AC011240	181326162		75077	13220	54350	142647
S/G/Y/R/B/O	NT_022396	AC083904	181677948	3	chr3	NT_022396	AC068308	181828735	3	0	1743	0	1743
S/G/Y/R/B/O	NT_022396	AC083904	181677948	3			AC011147	181465604		80367	1923	15415	97705
S/G/Y/R/B/O	NT_022396	AC083904	181677948	3			AC112131	181828735		135017	0	0	135017
S/G/Y/R/B/O	NT_022396	AC068308	181828735	3	chr3	NT_022396	AC022294	181983230	3	2007	0	0	2007
S/G/Y/R/B/O	NT_022396	AC068308	181828735	3			AC011147	181828735		21281	0	0	21281
S/G/Y/R/B/O	NT_022396	AC022294	181983230	3	chr3	NT_022396	AC125613	182135163	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC022294	181983230	3	chr3	NT_022676	AC069211	184072436	1	14527	10512	13399	38438
S/G/Y/R/B/O	NT_022396	AC022294	181983230	3			AC079737	184072436		144612	0	0	144612
S/G/Y/R/B/O	NT_022396	AC125613	182135163	3	chr3	NT_022396	AC117415	182209247	3	2004	0	0	2004
S/G/Y/R/B/O	NT_022396	AC117415	182209247	3	chr3	NT_022396	AC007547	182370337	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC007547	182370337	3	chr3	NT_022396	AC026359	182459140	3	0	2003	0	2003
S/G/Y/R/B/O	NT_022396	AC026359	182459140	3	chr3	NT_022396	AC012081	182535989	3	0	0	0	0
S/G/Y/R/B/O	NT_022396	AC012081	182535989	3

NT_022676

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_022676	AC109131	182724306	3	chr3	NT_022676	AC024104	182840844	3	2083	0	0	2083
S/G/Y/R/B/O	NT_022676	AC024104	182840844	3	chr3	NT_022676	AC084211	182876282	3	2063	0	0	2063
S/G/Y/R/B/O	NT_022676	AC084211	182876282	3	chr3	NT_022676	AC021055	183028281	3	0	0	0	0
S/G/Y/R/B/O	NT_022676	AC021055	183028281	3	chr3	NT_022676	AC083801	183185035	3	2001	0	0	2001
S/G/Y/R/B/O	NT_022676	AC083801	183185035	3	chr3	NT_022676	AC069431	183342655	3	0	1998	0	1998
S/G/Y/R/B/O	NT_022676	AC083801	183185035	3			AC078838	183342655		67756	0	43578	111334
S/G/Y/R/B/O	NT_022676	AC069431	183342655	3	chr3	NT_022676	AC092953	183464392	3	0	1933	0	1933
S/G/Y/R/B/O	NT_022676	AC069431	183342655	3			AC036127	183342655		23061	7792	6255	37108
S/G/Y/R/B/O	NT_022676	AC092953	183464392	3	chr3	NT_022676	AC108741	183572901	3	0	2027	0	2027
S/G/Y/R/B/O	NT_022676	AC092953	183464392	3			AC036127	183464392		55637	10850	11312	77799
S/G/Y/R/B/O	NT_022676	AC108741	183572901	3	chr3	NT_022676	AC104641	183586810	3	0	1988	0	1988
S/G/Y/R/B/O	NT_022676	AC104641	183586810	3	chr3	NT_022676	AC069417	183768924	3	0	1913	0	1913
S/G/Y/R/B/O	NT_022676	AC104641	183586810	3			AC026920	183586810		108555	17145	14793	140493
S/G/Y/R/B/O	NT_022676	AC069417	183768924	3	chr3	NT_022676	AC112647	183874007	3	2000	0	0	2000
S/G/Y/R/B/O	NT_022676	AC069417	183768924	3			AC025833	183572901		54702	12367	5739	72808
S/G/Y/R/B/O	NT_022676	AC112647	183874007	3	chr3	NT_022676	AC092960	183899929	3	0	0	0	0
S/G/Y/R/B/O	NT_022676	AC112647	183874007	3			AC025833	183874007		21447	3892	383	25722
S/G/Y/R/B/O	NT_022676	AC092960	183899929	3	chr3	NT_022676	AC069211	184072436	1	33147	0	4689	37836
S/G/Y/R/B/O	NT_022676	AC092960	183899929	3			AC034274	183768924		92472	10129	15013	117614
S/G/Y/R/B/O	NT_022676	AC069211	184072436	1
S/G/Y/R/B/O	NT_022676	AC069211	184072436	1	chr3	NT_022396	AC022294	181983230	3	14527	10512	13399	38438
S/G/Y/R/B/O	NT_022676	AC069211	184072436	1			AC034274	181983230		22877	2758	10235	35870
S/G/Y/R/B/O	NT_022676	AC069211	184072436	1			AC079737	181828735		14526	10512	13448	38486

NT_029253

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_029253	AC130417	184293282	1	chr3	NT_029253	AC129804	184302169	1	74104	3104	8135	85343
S/G/Y/R/B/O	NT_029253	AC130417	184293282	1	chr3	NT_029253	AC131160	184504131	3	19726	0	0	19726
S/G/Y/R/B/O	NT_029253	AC130417	184293282	1			AC013631	183899929		109838	4827	16310	130975
S/G/Y/R/B/O	NT_029253	AC130417	184293282	1			AC020694	183899929		102502	2101	13892	118495
S/G/Y/R/B/O	NT_029253	AC130417	184293282	1			AC068769	183899929		59943	1694	6154	67791
S/G/Y/R/B/O	NT_029253	AC130417	184293282	1			AC112773	183899929		96044	5034	16640	117718
S/G/Y/R/B/O	NT_029253	AC129804	184302169	1	chr3	NT_029253	AC131160	184504131	3	22325	0	21562	43887
S/G/Y/R/B/O	NT_029253	AC129804	184302169	1			AC013631	184504131		112457	8418	14088	134963
S/G/Y/R/B/O	NT_029253	AC129804	184302169	1			AC020694	184504131		125609	8641	4354	138604
S/G/Y/R/B/O	NT_029253	AC129804	184302169	1			AC068769	184504131		32446	2190	0	34636
S/G/Y/R/B/O	NT_029253	AC129804	184302169	1			AC112773	184504131		118319	7226	7918	133463
S/G/Y/R/B/O	NT_029253	AC131160	184504131	3	chr3	NT_029253	AC068644	184573085	3	2004	0	0	2004
S/G/Y/R/B/O	NT_029253	AC131160	184504131	3	chr3	NT_029253	AC130417	184293282	1	19726	0	0	19726
S/G/Y/R/B/O	NT_029253	AC131160	184504131	3			AC013631	184504131		41432	0	2004	43436
S/G/Y/R/B/O	NT_029253	AC131160	184504131	3			AC020694	184504131		48324	1711	0	50035
S/G/Y/R/B/O	NT_029253	AC131160	184504131	3			AC068769	184573085		10044	0	0	10044
S/G/Y/R/B/O	NT_029253	AC131160	184504131	3			AC112773	184573085		40369	0	7889	48258
S/G/Y/R/B/O	NT_029253	AC068644	184573085	3	chr3	NT_029253	AC131235	184751773	3	2004	0	0	2004
S/G/Y/R/B/O	NT_029253	AC131235	184751773	3	chr3	NT_029253	AC048331	184886375	1	79368	0	0	79368
S/G/Y/R/B/O	NT_029253	AC131235	184751773	3			AC024530	184751773		32820	4057	17234	54111
S/G/Y/R/B/O	NT_029253	AC131235	184751773	3			AC024530	184751773		32820	4057	17234	54111
S/G/Y/R/B/O	NT_029253	AC131235	184751773	3			AC061705	184886375		16669	1225	2164	20058
S/G/Y/R/B/O	NT_029253	AC131235	184751773	3			AC061705	184886375		16669	1225	2164	20058
S/G/Y/R/B/O	NT_029253	AC048331	184886375	1	chr3	NT_029253	AC078797	184970202	3	43676	0	0	43676
S/G/Y/R/B/O	NT_029253	AC048331	184886375	1			AC024530	184573085		63818	10217	24803	98838
S/G/Y/R/B/O	NT_029253	AC048331	184886375	1			AC061705	196708617		98305	0	7757	106062
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3	chr3	NT_029253	AC128714	185134932	3	0	1972	0	1972
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3	chr3	NT_029253	AC117437	185311035	1	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3	chr3	NT_029253	AC117437	185311035	1	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3	chr3	NT_029253	AC117437	185311035	1	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3	chr3	NT_029253	AC117437	185311035	1	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3			AC024530	184751773		16610	3683	3577	23870
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3			AC024530	184751773		16610	3683	3577	23870
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3			AC061705	184886375		28534	0	3546	32080
S/G/Y/R/B/O	NT_029253	AC078797	184970202	3			AC061705	184886375		28534	0	3546	32080
S/G/Y/R/B/O	NT_029253	AC128714	185134932	3	chr3	NT_029253	AC069244	185251954	1	0	0	0	0
S/G/Y/R/B/O	NT_029253	AC128714	185134932	3			AC112643	184970202		43000	0	0	43000
S/G/Y/R/B/O	NT_029253	AC128714	185134932	3			AC112643	184970202		43000	0	0	43000
S/G/Y/R/B/O	NT_029253	AC069244	185251954	1	chr3	NT_029253	AC117437	185311035	1	0	0	0	0
S/G/Y/R/B/O	NT_029253	AC069244	185251954	1	chr3	NT_029928	AC055725	196708617	3	30820	2580	20288	53688
S/G/Y/R/B/O	NT_029253	AC069244	185251954	1			AC023415	184970202		14011	2558	14256	30825
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1	chr3	NT_029253	AC078797	184970202	3	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1	chr3	NT_029253	AC078797	184970202	3	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1	chr3	NT_029253	AC078797	184970202	3	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1	chr3	NT_029253	AC078797	184970202	3	67486	0	73785	141271
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1			AC024530	196560117		13136	2474	2239	17849
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1			AC024530	196560117		13136	2474	2239	17849
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1			AC061705	184886375		23822	0	3661	27483
S/G/Y/R/B/O	NT_029253	AC117437	185311035	1			AC061705	184886375		23822	0	3661	27483

NT_037584

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_037584	AC092931	185364102	3
S/G/Y/R/B/O	NT_037584	AC092931	185364102	3	chr4	NT_006238	AC093795	45383429	3	129947	0	0	129947

NT_005962

Links	Contig1	Acc1	Start1	Phs	Chr2	Contig2	Acc2	Start2	Phs	Strong Overlap	Medium Overlap	Weak Overlap	Total Overlap
S/G/Y/R/B/O	NT_005962	AC117455	185526839	3	chr3	NT_005962	AC107294	185600020	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005962	AC117455	185526839	3			AC112643	185600020		53610	0	0	53610
S/G/Y/R/B/O	NT_005962	AC117455	185526839	3			AC117457	185600020		20284	7256	8709	36249
S/G/Y/R/B/O	NT_005962	AC107294	185600020	3	chr3	NT_005962	AC117436	185791437	3	2003	0	0	2003
S/G/Y/R/B/O	NT_005962	AC107294	185600020	3			AC016975	185600020		149583	4134	1332	155049
S/G/Y/R/B/O	NT_005962	AC107294	185600020	3			AC084050	185600020		13856	12510	19593	45959
S/G/Y/R/B/O	NT_005962	AC107294	185600020	3			AC117457	185526839		28198	5929	13695	47822
S/G/Y/R/B/O	NT_005962	AC117436	185791437	3	chr3	NT_005962	AC025573	185921069	3	0	1998	0	1998
S/G/Y/R/B/O	NT_005962	AC025573	185921069	3	chr3	NT_005962	AC007934	186037329	3	0	0	0	0
S/G/Y/R/B/O	NT_005962	AC025573	185921069	3			AC036183	185600020		69948	6252	8234	84434
S/G/Y/R/B/O	NT_005962	AC007934	186037329	3	chr3	NT_005962	AC128680	186104104	3	66120	0	0	66120
S/G/Y/R/B/O	NT_005962	AC007934	186037329	3			AC036183	185791437		54099	14992	12114	81205
S/G/Y/R/B/O	NT_005962	AC128680	186104104	3	chr3	NT_005962	AC132516	186250279	3	0	1995	0	1995
S/G/Y/R/B/O	NT_005962	AC128680	186104104	3			AC036183	186037329		18567	5728	846	25141
S/G/Y/R/B/O	NT_005962	AC132516	186250279	3	chr3	NT_005962	AC099661	186312538	3	2004	0	0	2004
S/G/Y/R/B/O	NT_005962	AC132516	186250279	3			AC116301	186312538		62190	0	0	62190
S/G/Y/R/B/O	NT_005962	AC099661	186312538	3	chr3	NT_005962	AC133473	186468536	1	35198	0	16079	51277
S/G/Y/R/B/O	NT_005962	AC099661	186312538	3			AC015525	186104104		20468	0	97553	118021
S/G/Y/R/B/O	NT_005962	AC133473	186468536	1	chr3	NT_005962	AC016961	186472668	1	0	4648	3576	8224
S/G/Y/R/B/O	NT_005962	AC133473	186468536	1			AC015525	186468536		36106	1429	8879	46414
S/G/Y/R/B/O	NT_005962	AC133473	186468536	1			AC069420	186472668		32341	2249	18747	53337
S/G/Y/R/B/O	NT_005962	AC016961	186472668	1	chr3	NT_005962	AC134997	186490048	1	13356	0	3086	16442
S/G/Y/R/B/O	NT_005962	AC016961	186472668	1	chr3	NT_005962	AC108670	186689712	3	103659	0	0	103659
S/