This directory contains reciprocal-best netted chains for hs1-mm39.

 - hs1.mm39.rbest.net.gz: hs1-referenced recip.best net to mm39.
 - hs1.mm39.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hs1 to mm39 through the recip.best net.

 - mm39.hs1.rbest.net.gz: mm39-referenced recip.best net.
 - mm39.hs1.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.hs1.mm39.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                    Last modified      Size  Description
      Parent Directory                             -   
      axtRBestNet/            2022-10-18 16:59    -   
      md5sum.txt              2022-09-27 15:08  228   
      hs1.mm39.rbest.net.gz   2022-09-27 15:08  140M  
      hs1.mm39.rbest.chain.gz 2022-09-27 15:07   65M  
      mm39.hs1.rbest.chain.gz 2022-09-27 15:07   65M  
      mm39.hs1.rbest.net.gz   2022-09-27 15:06   91M