This directory contains the April 1, 2001 GenBank freeze ordered and oriented according to the corresponding fingerprint map and genome layout from Wash. U., taking into account overlap between fragments and bridging mRNA, EST, plasmid and BAC end pairs. Chromosomes 20, 21 and 22 are the finished versions as obtained from NCBI. This directory includes the following files: contigFa.zip - The working draft sequence one file per fingerprint contig (clone layout) in Fasta format. Unpacks with one directory for each chromosome and one subdirectory for each fingerprint contig. contigFaMasked.zip - RepeatMasked version of contigFa.zip (with N's in place of repeating elements.) contigAgp.zip - Description of how the working draft was generated from fragments at a contig layout level. chromFa.zip - Similar to contigFa.zip, but it unpacks to one file per chromosome. chromFaMasked.zip - RepeatMasked version of chromFa.zip chromAgp.zip - Similar to contigAGP.zip, but it unpacks to one file per chromosome.
Name Last modified Size Description
Parent Directory - liftAll.zip 2001-06-12 23:36 9.5K database.zip 2001-10-13 14:48 1.2G contigOut.zip 2001-06-12 23:36 124M contigFaMasked.zip 2001-06-12 23:34 510M contigFa.zip 2001-06-12 23:26 811M contigAgp.zip 2001-06-13 14:08 4.0M chromOut.zip 2001-06-12 23:35 124M chromFaMasked.zip 2001-06-12 23:30 512M chromFa.zip 2001-06-12 23:19 812M chromAgp.zip 2001-06-12 23:34 4.0M