900 276 82 29 chr5_random 196 1017 -2707763 - L1ME LINE L1 -378 5784 4918 25 31 0 0 chr5_random 1426 1458 -2707322 + AT_rich Low_complexity Low_complexity 1 32 0 367 326 82 30 chr5_random 1504 1737 -2707043 + L2 LINE L2 1873 2117 -1197 895 237 94 74 chr5_random 1775 2168 -2706612 - MER57B LTR ERV1 0 434 3 464 159 26 33 chr5_random 2641 2792 -2705988 + CT-rich Low_complexity Low_complexity 2 151 0 252 0 0 0 chr5_random 2793 2821 -2705959 + (TC)n Simple_repeat Simple_repeat 1 28 0 1998 116 11 3 chr5_random 2821 3105 -2705675 - AluSx SINE Alu -24 288 3 850 201 96 48 chr5_random 3205 3498 -2705282 - MER31-int LTR ERV1 -3588 1348 1042 261 211 19 0 chr5_random 3758 3810 -2704970 - MER31-int LTR ERV1 -4062 874 822 401 263 35 58 chr5_random 4862 5033 -2703747 - MER5B DNA MER1_type 0 178 12 5108 67 13 0 chr5_random 5380 6051 -2702729 + L1PA7 LINE L1 5475 6154 0 261 0 0 0 chr5_random 6077 6106 -2702674 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 22 88 0 0 chr5_random 6427 6484 -2702296 + AT_rich Low_complexity Low_complexity 1 57 0 297 198 154 22 chr5_random 6613 6704 -2702076 - L1ME LINE L1 -1543 4603 4501 23 86 0 0 chr5_random 6857 6915 -2701865 + AT_rich Low_complexity Low_complexity 1 58 0 1758 174 3 3 chr5_random 7289 7577 -2701203 - AluSx SINE Alu -23 289 2 296 265 0 0 chr5_random 7965 8033 -2700747 - LTR40a LTR ERVL 0 519 452 1671 224 71 102 chr5_random 8593 9200 -2699580 - MLT1E LTR MaLR 0 593 6 1246 251 68 14 chr5_random 9789 10156 -2698624 - HERVL40 LTR ERVL -1426 4104 3718 301 271 10 31 chr5_random 10170 10266 -2698514 - HERVL40 LTR ERVL -2023 3507 3414 1560 222 11 65 chr5_random 10479 10925 -2697855 - MLT1C LTR MaLR -4 463 42 387 242 33 0 chr5_random 10957 11048 -2697732 - HERVL40 LTR ERVL -2172 3358 3265 522 283 67 37 chr5_random 11380 11649 -2697131 - HERVL40 LTR ERVL -5252 278 2 1772 204 79 12 chr5_random 11651 12083 -2696697 - LTR40b LTR ERVL -1 461 1 22 35 0 0 chr5_random 12344 12373 -2696407 + AT_rich Low_complexity Low_complexity 1 29 0 2171 111 0 3 chr5_random 12380 12677 -2696103 + AluSq SINE Alu 1 296 -17 721 183 8 0 chr5_random 12809 12935 -2695845 + FLAM_C SINE Alu 1 127 -16 37 23 0 0 chr5_random 12935 12979 -2695801 + AT_rich Low_complexity Low_complexity 1 44 0 984 233 54 70 chr5_random 15169 15538 -2693242 - MLT1A1 LTR MaLR -2 363 1 2105 232 53 72 chr5_random 15720 16874 -2691906 - L1ME2 LINE L1 -44 6122 4613 1538 104 4 29 chr5_random 16887 17128 -2691652 + AluSp SINE Alu 1 235 -78 301 254 182 45 chr5_random 17394 17594 -2691186 - L1MD3 LINE L1 -6 8027 7824 2180 74 0 11 chr5_random 17911 18241 -2690539 - AluY SINE Alu 0 327 1 24 77 0 0 chr5_random 18291 18343 -2690437 + AT_rich Low_complexity Low_complexity 1 52 0 1381 141 9 0 chr5_random 19690 19903 -2688877 + AluSg/x SINE Alu 81 295 -17 312 102 0 0 chr5_random 19904 19953 -2688827 + (GA)n Simple_repeat Simple_repeat 1 49 0 453 70 0 35 chr5_random 19954 20040 -2688740 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 360 189 0 0 chr5_random 20029 20103 -2688677 + GA-rich Low_complexity Low_complexity 2 75 0 * 294 109 0 0 chr5_random 20381 20427 -2688353 + MADE1 DNA Mariner 35 80 0 1333 121 36 0 chr5_random 20430 20654 -2688126 - L1MA2 LINE L1 -30 6274 6043 1188 74 0 12 chr5_random 20938 21101 -2687679 - AluYa5 SINE Alu -3 308 148 220 216 20 0 chr5_random 23578 23629 -2685151 + CT-rich Low_complexity Low_complexity 1 52 0 751 97 0 0 chr5_random 23843 23946 -2684834 + AluY SINE Alu 195 297 -14 2624 198 32 4 chr5_random 24073 24569 -2684211 - MLT2B1 LTR ERVL -10 510 1 236 246 0 33 chr5_random 25258 25319 -2683461 + MER5A DNA MER1_type 128 186 -3 22 0 0 0 chr5_random 26826 26848 -2681932 + AT_rich Low_complexity Low_complexity 1 22 0 5590 163 70 9 chr5_random 27505 29441 -2679339 + L1MA4 LINE L1 4245 6299 -1 5775 31 0 0 chr5_random 29496 30179 -2678601 + L1PA4 LINE L1 5470 6152 -3 550 26 13 13 chr5_random 30190 30267 -2678513 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 2260 88 0 3 chr5_random 30956 31250 -2677530 + AluY SINE Alu 1 293 -18 452 203 81 49 chr5_random 31857 31980 -2676800 - MER68 LTR ERV1 0 562 436 434 327 36 12 chr5_random 32638 32806 -2675974 + MIR SINE MIR 65 236 -26 181 347 53 11 chr5_random 33424 33519 -2675261 - L2 LINE L2 -463 2851 2753 23 68 0 0 chr5_random 33872 33916 -2674864 + AT_rich Low_complexity Low_complexity 1 44 0 308 273 11 0 chr5_random 33971 34074 -2674706 + L1M2 LINE L1 5483 5586 -535 1729 172 30 12 chr5_random 34161 34492 -2674288 + MER1B DNA MER1_type 1 337 0 1887 129 11 7 chr5_random 34624 34903 -2673877 + AluSp SINE Alu 1 280 -33 252 0 0 0 chr5_random 34904 34932 -2673848 + (CA)n Simple_repeat Simple_repeat 2 29 0 1004 220 23 60 chr5_random 35237 35572 -2673208 - MER93b LTR ERV1 -2 371 74 257 287 15 12 chr5_random 35883 36007 -2672773 - MER93b-int LTR ERV1 -146 6967 6586 1071 227 109 84 chr5_random 36251 36849 -2671931 - LTR49-int LTR ERV1 -188 4748 4136 274 228 18 0 chr5_random 36963 37020 -2671760 - LTR49-int LTR ERV1 -944 5387 5330 * 992 235 87 3 chr5_random 37019 37330 -2671450 - LTR49-int LTR ERV1 -1189 3747 3411 268 221 0 73 chr5_random 37731 37799 -2670981 + L2 LINE L2 3008 3070 -243 1981 139 0 19 chr5_random 37833 38150 -2670630 + AluSx SINE Alu 1 311 -1 817 108 0 0 chr5_random 38504 38661 -2670119 - AluSc SINE Alu 0 324 168 22 0 0 0 chr5_random 39104 39126 -2669654 + AT_rich Low_complexity Low_complexity 1 22 0 1099 216 34 76 chr5_random 39426 39833 -2668947 - MLT1B LTR MaLR 0 390 1 2018 236 61 41 chr5_random 40003 40947 -2667833 + L1MA8 LINE L1 2793 3755 -3810 41702 38 26 2 chr5_random 40951 46953 -2661827 + L1PA2 LINE L1 1 6154 -1 5645 214 41 8 chr5_random 46938 48413 -2660367 + L1MA8 LINE L1 3734 5257 -2308 * 2652 211 24 68 chr5_random 48413 49428 -2659352 - MER52A LTR ERV1 0 1755 531 788 183 7 20 chr5_random 49451 49604 -2659176 - MER52A LTR ERV1 -943 812 662 6695 174 35 40 chr5_random 49611 50086 -2658694 + L1MA8 LINE L1 5260 5736 -1974 349 217 0 0 chr5_random 50086 50146 -2658634 - MER52A LTR ERV1 -288 1467 1408 6695 174 35 40 chr5_random 50146 52003 -2656777 + L1MA8 LINE L1 5736 7708 -2 22 56 0 0 chr5_random 53166 53202 -2655578 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5_random 54348 54378 -2654402 + AT_rich Low_complexity Low_complexity 1 30 0 306 0 0 0 chr5_random 54780 54814 -2653966 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 22 35 0 0 chr5_random 54861 54890 -2653890 + GC_rich Low_complexity Low_complexity 1 29 0 1206 175 144 4 chr5_random 57629 57770 -2651010 - AluJb SINE Alu -9 293 173 495 0 0 0 chr5_random 57770 57825 -2650955 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1206 175 144 4 chr5_random 57825 57940 -2650840 - AluJb SINE Alu -129 173 1 1006 131 17 34 chr5_random 58067 58242 -2650538 + MER2 DNA MER2_type 1 172 -173 248 250 103 0 chr5_random 58331 58399 -2650381 + MER2 DNA MER2_type 271 345 0 21 57 0 0 chr5_random 58703 58738 -2650042 + AT_rich Low_complexity Low_complexity 1 35 0 598 287 101 0 chr5_random 60073 60282 -2648498 - MIR SINE MIR -3 259 30 392 248 7 66 chr5_random 60416 60553 -2648227 + L1ME3A LINE L1 6032 6160 -10 258 216 14 0 chr5_random 60693 60767 -2648013 + (TA)n Simple_repeat Simple_repeat 1 75 0 186 308 131 0 chr5_random 61034 61164 -2647616 + L2 LINE L2 1910 2056 -1258 591 264 39 34 chr5_random 62027 62205 -2646575 + MLT1D LTR MaLR 1 179 -326 248 248 26 88 chr5_random 62257 62370 -2646410 - MLT1E2 LTR MaLR -469 157 52 2085 107 0 3 chr5_random 62392 62683 -2646097 + AluSx SINE Alu 1 290 -22 1271 195 13 29 chr5_random 62740 63039 -2645741 + MLT1D LTR MaLR 235 505 0 306 0 0 0 chr5_random 63948 63982 -2644798 + (TG)n Simple_repeat Simple_repeat 2 35 0 25 0 0 0 chr5_random 63989 64014 -2644766 + AT_rich Low_complexity Low_complexity 1 25 0 200 100 25 0 chr5_random 64718 64758 -2644022 + (TA)n Simple_repeat Simple_repeat 1 41 0 533 359 26 15 chr5_random 64979 65249 -2643531 - L3 LINE CR1 0 1577 1305 22 0 0 0 chr5_random 65511 65533 -2643247 + AT_rich Low_complexity Low_complexity 1 22 0 189 342 0 99 chr5_random 65785 65896 -2642884 - L3 LINE CR1 -891 686 587 558 178 159 45 chr5_random 67448 67605 -2641175 + MLT1B LTR MaLR 1 175 -215 424 319 126 21 chr5_random 68162 68353 -2640427 - MIR SINE MIR -50 212 2 240 35 0 0 chr5_random 68751 68780 -2640000 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2276 104 3 0 chr5_random 68943 69242 -2639538 - AluSc SINE Alu -7 302 3 222 133 0 22 chr5_random 70976 71021 -2637759 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 2044 118 3 3 chr5_random 71442 71739 -2637041 + AluSq SINE Alu 1 297 -16 259 316 53 18 chr5_random 72781 72895 -2635885 - L2 LINE L2 -13 3300 3183 391 290 54 42 chr5_random 73924 74255 -2634525 + L1ME4a LINE L1 5546 5880 -241 216 362 152 29 chr5_random 175547 175823 -2532957 + L2 LINE L2 2140 2449 -865 493 248 171 18 chr5_random 176225 176447 -2532333 + MER5C DNA MER1_type 1 256 -68 201 39 0 0 chr5_random 176960 176986 -2531794 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 685 305 75 62 chr5_random 177216 177603 -2531177 + LTR16A LTR ERVL 64 455 -2 230 162 22 59 chr5_random 177630 177766 -2531014 + (TA)n Simple_repeat Simple_repeat 2 132 0 348 384 113 20 chr5_random 178573 179024 -2529756 + L2 LINE L2 2247 2739 -575 35 0 0 0 chr5_random 179154 179189 -2529591 + AT_rich Low_complexity Low_complexity 1 35 0 1996 216 79 17 chr5_random 179189 179920 -2528860 - Charlie1 DNA MER1_type -117 2644 1789 7562 19 7 0 chr5_random 179921 181249 -2527531 + L1PA4 LINE L1 4808 6142 -13 481 275 78 12 chr5_random 181329 181496 -2527284 + Charlie1 DNA MER1_type 1616 1793 -968 21 0 0 0 chr5_random 181496 181517 -2527263 + AT_rich Low_complexity Low_complexity 1 21 0 404 240 8 0 chr5_random 181916 182037 -2526743 + (TA)n Simple_repeat Simple_repeat 1 122 0 252 316 187 0 chr5_random 183121 183260 -2525520 + L3 LINE CR1 185 349 -1228 211 389 33 0 chr5_random 183394 183484 -2525296 + L3 LINE CR1 1347 1439 -138 2173 99 0 29 chr5_random 183528 183840 -2524940 - AluSq SINE Alu -10 303 1 297 298 24 0 chr5_random 183861 183945 -2524835 - MER113 DNA MER1_type? 0 521 436 26 0 0 0 chr5_random 185278 185304 -2523476 + AT_rich Low_complexity Low_complexity 1 26 0 1968 78 4 0 chr5_random 185329 185598 -2523182 - L1PA10 LINE L1 -3 6165 5896 2342 135 0 0 chr5_random 185978 186312 -2522468 + MER7A DNA MER2_type 3 334 -12 276 30 0 0 chr5_random 186380 186413 -2522367 + (GA)n Simple_repeat Simple_repeat 2 34 0 2058 177 20 0 chr5_random 186414 186765 -2522015 - MLT2D LTR ERVL -56 358 1 34 72 0 0 chr5_random 186924 186993 -2521787 + AT_rich Low_complexity Low_complexity 1 69 0 1506 184 57 9 chr5_random 187037 187368 -2521412 + MER7A DNA MER2_type 2 346 0 22 56 0 0 chr5_random 188710 188746 -2520034 + AT_rich Low_complexity Low_complexity 1 36 0 270 295 13 13 chr5_random 188805 188883 -2519897 - L2 LINE L2 0 3313 3236 2064 53 4 4 chr5_random 188994 189259 -2519521 - AluY SINE Alu -46 265 1 226 0 59 0 chr5_random 189272 189306 -2519474 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 780 334 148 23 chr5_random 189370 189908 -2518872 - L2 LINE L2 -204 3109 2502 288 175 32 0 chr5_random 189960 190023 -2518757 - MER53 DNA DNA 0 189 125 35 41 0 0 chr5_random 190047 190096 -2518684 + AT_rich Low_complexity Low_complexity 1 49 0 546 117 54 9 chr5_random 190119 190230 -2518550 - MER53 DNA DNA -73 116 1 1556 261 84 16 chr5_random 190438 190994 -2517786 - L1MCc LINE L1 -5800 623 30 288 111 0 0 chr5_random 192637 192682 -2516098 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 26 0 0 0 chr5_random 193127 193153 -2515627 + AT_rich Low_complexity Low_complexity 1 26 0 280 125 42 0 chr5_random 193153 193201 -2515579 - L1ME1 LINE L1 -25 6141 6092 2023 119 7 0 chr5_random 193370 193656 -2515124 - AluSq SINE Alu -25 288 1 4155 222 45 36 chr5_random 193707 195586 -2513194 - L1MCa LINE L1 -4591 1973 1 325 303 8 17 chr5_random 197163 197282 -2511498 + MER94 DNA DNA 7 124 -10 619 299 87 6 chr5_random 197324 197679 -2511101 + Charlie7 DNA MER1_type 1614 1997 -615 192 143 0 0 chr5_random 197684 197726 -2511054 + (TA)n Simple_repeat Simple_repeat 1 42 0 1584 195 87 6 chr5_random 197744 198078 -2510702 + MLT1A1 LTR MaLR 1 361 -4 3911 219 105 83 chr5_random 198083 198804 -2509976 + MLT1A1-int LTR MaLR 2 763 -972 1781 144 7 4 chr5_random 198804 199081 -2509699 + AluSx SINE Alu 23 300 -12 3911 219 105 83 chr5_random 199081 199592 -2509188 + MLT1A1-int LTR MaLR 763 1261 -474 1145 171 107 0 chr5_random 199580 199796 -2508984 - L1MC/D LINE L1 -597 5747 5509 * 37 62 0 0 chr5_random 200329 200394 -2508386 + AT_rich Low_complexity Low_complexity 1 65 0 4069 109 58 43 chr5_random 200719 201654 -2507126 + pTR5 LTR ERV1 754 2025 -413 356 204 31 20 chr5_random 201654 201752 -2507028 + LTR30 LTR ERV1 544 642 -80 1382 125 5 9 chr5_random 201755 201979 -2506801 + pTR5 LTR ERV1 172 394 -2044 30 69 0 0 chr5_random 203062 203120 -2505660 + AT_rich Low_complexity Low_complexity 1 58 0 419 365 74 30 chr5_random 203325 203587 -2505193 + MLT1K LTR MaLR 3 297 -291 2604 179 19 17 chr5_random 203587 204128 -2504652 + MER34 LTR ERV1 1 542 0 419 365 74 30 chr5_random 204128 204336 -2504444 + MLT1K LTR MaLR 297 494 -94 2244 202 36 56 chr5_random 204337 204891 -2503889 + MER67A LTR ERV1 1 543 0 289 172 17 52 chr5_random 205310 205426 -2503354 + CT-rich Low_complexity Low_complexity 3 114 0 595 231 46 64 chr5_random 206158 206331 -2502449 - MER5B DNA MER1_type -7 171 2 30 27 0 0 chr5_random 206630 206667 -2502113 + AT_rich Low_complexity Low_complexity 1 37 0 259 392 20 7 chr5_random 206814 206962 -2501818 - L1MC/D LINE L1 -2165 5643 5494 21 0 0 0 chr5_random 207152 207173 -2501607 + AT_rich Low_complexity Low_complexity 1 21 0 357 86 0 0 chr5_random 207437 207495 -2501285 + (CA)n Simple_repeat Simple_repeat 1 58 0 588 229 0 8 chr5_random 207567 207689 -2501091 - MLT1C LTR MaLR -7 460 340 355 282 146 23 chr5_random 207692 208255 -2500525 - L1MEc LINE L1 -2590 3625 2908 1051 211 18 32 chr5_random 208284 208563 -2500217 - L1MC2 LINE L1 -184 6160 5886 372 22 0 0 chr5_random 208597 208642 -2500138 + (TG)n Simple_repeat Simple_repeat 1 45 0 319 246 44 108 chr5_random 208652 208855 -2499925 - L1 LINE L1 -1039 5525 5336 3374 246 94 64 chr5_random 208880 210810 -2497970 - L1MCb LINE L1 -3617 2947 803 201 39 0 0 chr5_random 210810 210836 -2497944 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3374 246 94 64 chr5_random 210836 211618 -2497162 - L1MCb LINE L1 -5761 803 46 404 281 120 35 chr5_random 211673 212271 -2496509 - L1MEc LINE L1 -3403 2812 2204 22 35 0 0 chr5_random 212326 212355 -2496425 + AT_rich Low_complexity Low_complexity 1 29 0 45 75 0 0 chr5_random 212469 212563 -2496217 + AT_rich Low_complexity Low_complexity 1 94 0 1946 94 0 0 chr5_random 212785 213041 -2495739 - AluY SINE Alu 0 311 56 282 341 58 17 chr5_random 213079 213252 -2495528 - HAL1 LINE L1 -1990 517 338 331 268 243 59 chr5_random 213550 213822 -2494958 + L2 LINE L2 2992 3313 0 261 0 0 0 chr5_random 214923 214952 -2493828 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 422 224 0 12 chr5_random 216245 216330 -2492450 - MER90 LTR ERV1 -1 613 530 * 1521 225 38 28 chr5_random 216327 216750 -2492030 - MER90 LTR ERV1 -187 427 1 1968 129 0 4 chr5_random 218012 218338 -2490442 - AluSc SINE Alu 0 325 1 24 53 0 0 chr5_random 218338 218376 -2490404 + AT_rich Low_complexity Low_complexity 1 38 0 310 266 125 31 chr5_random 218644 218772 -2490008 - MIR SINE MIR -48 214 75 981 204 50 59 chr5_random 218881 219101 -2489679 - AluJo SINE Alu -30 282 65 971 114 0 0 chr5_random 219484 219615 -2489165 + AluSc SINE Alu 1 131 -178 2145 120 3 16 chr5_random 219618 219752 -2489028 + AluSc SINE Alu 1 135 -174 2102 121 0 3 chr5_random 219752 220057 -2488723 + AluSg SINE Alu 1 304 -6 2145 120 3 16 chr5_random 220057 220230 -2488550 + AluSc SINE Alu 135 304 -5 1511 204 11 0 chr5_random 221222 221522 -2487258 - AluJb SINE Alu 0 307 5 186 43 0 0 chr5_random 223367 223390 -2485390 + (CA)n Simple_repeat Simple_repeat 2 24 0 320 258 0 43 chr5_random 224672 224765 -2484015 + MIR SINE MIR 34 122 -140 3433 267 92 29 chr5_random 224858 226251 -2482529 + L1M4 LINE L1 44 1524 -5018 273 307 100 7 chr5_random 226335 226475 -2482305 + L1M4 LINE L1 1942 2094 -4552 4042 252 42 22 chr5_random 226494 228258 -2480522 + L1M4 LINE L1 2207 4004 -2640 3808 232 57 65 chr5_random 228277 228552 -2480228 + L1MB5 LINE L1 3331 3607 -2567 2027 101 76 25 chr5_random 228552 228909 -2479871 + THE1C LTR MaLR 1 375 0 3808 232 57 65 chr5_random 228909 228975 -2479805 + L1MB5 LINE L1 3607 3672 -2502 884 221 6 0 chr5_random 228975 229138 -2479642 + FAM SINE Alu 4 167 -8 3808 232 57 65 chr5_random 229138 229150 -2479630 + L1MB5 LINE L1 3672 3683 -2491 2053 110 0 3 chr5_random 229150 229455 -2479325 + AluSx SINE Alu 1 304 0 3808 232 57 65 chr5_random 229455 230572 -2478208 + L1MB5 LINE L1 3683 4807 -1367 1563 194 23 0 chr5_random 230572 230871 -2477909 + AluJo SINE Alu 6 311 -1 3808 232 57 65 chr5_random 230871 231577 -2477203 + L1MB5 LINE L1 4807 5490 -684 2074 115 11 0 chr5_random 231577 231886 -2476894 + AluSp SINE Alu 1 312 0 3808 232 57 65 chr5_random 231886 232558 -2476222 + L1MB5 LINE L1 5490 6166 -8 364 258 159 33 chr5_random 232704 232886 -2475894 - MER92B LTR ERV1 0 636 432 2028 129 211 2 chr5_random 233727 234129 -2474651 - LTR19A LTR ERV1 0 486 1 2112 254 119 24 chr5_random 234146 234900 -2473880 + MER69B DNA AcHobo 243 1068 -158 1509 247 70 24 chr5_random 234900 235369 -2473411 + MLT1D LTR MaLR 3 493 -12 230 114 0 0 chr5_random 235473 235508 -2473272 + MLT1D LTR MaLR 592 626 0 296 222 103 0 chr5_random 235574 235691 -2473089 + MER69B DNA AcHobo 1098 1226 0 193 286 16 32 chr5_random 235760 235823 -2472957 - L2 LINE L2 -13 3259 3198 196 283 17 17 chr5_random 235934 235994 -2472786 + MIR SINE MIR 91 150 -112 1804 126 23 0 chr5_random 236082 236343 -2472437 + AluSx SINE Alu 32 298 -14 306 73 0 0 chr5_random 236924 236957 -2471823 + (CA)n Simple_repeat Simple_repeat 1 74 0 306 73 0 0 chr5_random 236957 236998 -2471782 + (CA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5_random 237177 237206 -2471574 + AT_rich Low_complexity Low_complexity 1 29 0 2020 139 0 3 chr5_random 237287 237589 -2471191 + AluSx SINE Alu 1 301 -11 1315 277 94 31 chr5_random 237993 238902 -2469878 + L1ME3A LINE L1 5003 5980 -190 254 293 52 26 chr5_random 238929 239045 -2469735 + L1ME3A LINE L1 6052 6170 0 2074 138 125 10 chr5_random 240507 240891 -2467889 - MSTA LTR MaLR 0 428 1 189 371 14 0 chr5_random 241706 241776 -2467004 - MIR SINE MIR -156 106 36 186 312 147 45 chr5_random 242732 242889 -2465891 - L3b LINE CR1 -10 1573 1401 4106 130 70 18 chr5_random 243257 243996 -2464784 - LTR1 LTR ERV1 0 785 8 226 274 116 24 chr5_random 244737 244901 -2463879 - L1MC5 LINE L1 -48 7913 7735 243 178 79 10 chr5_random 246558 246659 -2462121 + (TA)n Simple_repeat Simple_repeat 1 108 0 333 292 11 0 chr5_random 246744 246833 -2461947 - MIR SINE MIR -107 155 66 215 107 89 0 chr5_random 247102 247158 -2461622 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 436 356 144 0 chr5_random 249436 249616 -2459164 + MIR SINE MIR 39 244 -18 29 28 0 0 chr5_random 250541 250577 -2458203 + AT_rich Low_complexity Low_complexity 1 36 0 23 78 0 0 chr5_random 250629 250680 -2458100 + AT_rich Low_complexity Low_complexity 1 51 0 2086 103 11 0 chr5_random 251198 251526 -2457254 - AluY SINE Alu 0 331 1 3653 120 143 132 chr5_random 251669 253043 -2455737 - pTR5 LTR ERV1 0 2438 743 2556 21 0 0 chr5_random 253372 253663 -2455117 - L1P2 LINE L1 -417 5738 5448 * 2911 51 0 0 chr5_random 253658 254029 -2454751 + L1P LINE L1 5030 5400 -746 389 182 55 91 chr5_random 254029 254139 -2454641 - Charlie1a DNA MER1_type -1160 295 190 234 91 0 0 chr5_random 254177 254210 -2454570 - MER96B DNA MER1_type? -193 224 192 2174 105 0 13 chr5_random 254308 254612 -2454168 - AluSc SINE Alu -9 300 1 732 204 59 45 chr5_random 254619 254743 -2454037 + MER96B DNA MER1_type? 194 324 -93 1821 153 135 13 chr5_random 254743 255121 -2453659 + MSTA LTR MaLR 3 426 -2 732 204 59 45 chr5_random 255121 255216 -2453564 + MER96B DNA MER1_type? 324 416 -1 647 218 70 0 chr5_random 255227 255369 -2453411 - Charlie1a DNA MER1_type -1300 155 4 29 28 0 0 chr5_random 255379 255415 -2453365 + AT_rich Low_complexity Low_complexity 1 36 0 2021 130 14 3 chr5_random 255535 255828 -2452952 + AluSx SINE Alu 5 300 -12 24 32 0 0 chr5_random 256321 256352 -2452428 + AT_rich Low_complexity Low_complexity 1 31 0 224 316 73 52 chr5_random 258735 258871 -2449909 + MIR3 SINE MIR 12 150 -58 39 0 0 0 chr5_random 258968 259007 -2449773 + AT_rich Low_complexity Low_complexity 1 39 0 336 250 270 0 chr5_random 259790 259938 -2448842 + MER5A DNA MER1_type 2 189 0 24 32 0 0 chr5_random 260529 260560 -2448220 + AT_rich Low_complexity Low_complexity 1 31 0 5644 124 15 1 chr5_random 261569 262518 -2446262 + L1PA13 LINE L1 5198 6158 -5 21 57 0 0 chr5_random 263004 263039 -2445741 + AT_rich Low_complexity Low_complexity 1 35 0 205 337 93 31 chr5_random 263307 263500 -2445280 - MIR SINE MIR -7 255 51 192 200 0 0 chr5_random 264618 264658 -2444122 + A-rich Low_complexity Low_complexity 122 161 0 * 702 151 22 22 chr5_random 264651 264830 -2443950 + GA-rich Low_complexity Low_complexity 2 180 0 308 138 15 46 chr5_random 266150 266215 -2442565 - MLT1F LTR MaLR -16 526 464 870 202 11 16 chr5_random 266478 266666 -2442114 - AluJb SINE Alu -5 307 121 465 275 54 13 chr5_random 266674 266823 -2441957 - MLT1H LTR MaLR -392 157 3 273 363 70 10 chr5_random 267735 267936 -2440844 + MIR SINE MIR 12 224 -38 1953 162 0 7 chr5_random 267951 268260 -2440520 + AluJb SINE Alu 1 307 -5 208 132 0 38 chr5_random 268390 268443 -2440337 + (TTC)n Simple_repeat Simple_repeat 2 52 0 26 30 0 0 chr5_random 268920 268953 -2439827 + AT_rich Low_complexity Low_complexity 1 33 0 23 78 0 0 chr5_random 269125 269176 -2439604 + AT_rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr5_random 269648 269677 -2439103 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5_random 270975 270996 -2437784 + AT_rich Low_complexity Low_complexity 1 21 0 4701 208 16 36 chr5_random 271005 271647 -2437133 - L1 LINE L1 -1520 4626 4018 1541 179 4 11 chr5_random 271647 271920 -2436860 - AluJb SINE Alu -27 285 15 4701 208 16 36 chr5_random 271920 272490 -2436290 - L1 LINE L1 -2128 4018 3438 531 230 140 6 chr5_random 272492 272670 -2436110 + MER57A LTR ERV1 202 403 0 918 173 22 140 chr5_random 272914 273185 -2435595 + MER101B LTR ERV1 1 239 -331 1714 169 41 0 chr5_random 273300 273472 -2435308 - AluSx SINE Alu -5 307 117 261 0 0 0 chr5_random 273472 273501 -2435279 + (TG)n Simple_repeat Simple_repeat 2 30 0 1714 169 41 0 chr5_random 273501 273623 -2435157 - AluSx SINE Alu -195 117 1 290 258 32 21 chr5_random 273649 273742 -2435038 + MER101 LTR ERV1 346 439 -35 185 0 40 0 chr5_random 274203 274228 -2434552 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 2280 103 3 0 chr5_random 274231 274542 -2434238 - AluSp SINE Alu -1 312 1 1036 226 12 23 chr5_random 274565 274822 -2433958 + MER34C LTR ERV1 160 413 -172 258 267 47 0 chr5_random 274961 275047 -2433733 + MER57A-int LTR ERV1 904 993 -3943 575 181 98 60 chr5_random 275091 275306 -2433474 + MER57A-int LTR ERV1 1088 1310 -3626 860 246 118 71 chr5_random 275306 275562 -2433218 + MER57A-int LTR ERV1 1467 1710 -3226 2165 114 0 13 chr5_random 275562 275870 -2432910 + AluSq SINE Alu 5 308 -5 860 246 118 71 chr5_random 275870 276145 -2432635 + MER57A-int LTR ERV1 1710 2023 -2913 369 264 83 42 chr5_random 276154 276370 -2432410 + MER57A-int LTR ERV1 2129 2353 -2583 351 213 0 0 chr5_random 276416 276496 -2432284 + (TA)n Simple_repeat Simple_repeat 2 81 0 542 251 138 65 chr5_random 276501 276900 -2431880 + MSTC LTR MaLR 1 428 0 1214 234 41 26 chr5_random 276982 277371 -2431409 + MER57A-int LTR ERV1 2564 2958 -1978 3435 159 34 20 chr5_random 277715 278363 -2430417 + L1PA16 LINE L1 5501 6157 -9 2521 141 50 2 chr5_random 278773 279176 -2429604 + MSTB LTR MaLR 1 422 -4 205 314 163 26 chr5_random 279729 279882 -2428898 + MER5B DNA MER1_type 2 175 -3 2367 234 51 77 chr5_random 280733 281694 -2427086 + MER57A-int LTR ERV1 4827 5762 -1775 852 247 27 26 chr5_random 281811 282189 -2426591 + MER57A-int LTR ERV1 2716 6169 -1368 222 37 0 0 chr5_random 282193 282220 -2426560 + (TA)n Simple_repeat Simple_repeat 2 28 0 2009 122 0 64 chr5_random 282220 282547 -2426233 - AluSx SINE Alu -6 306 1 445 217 52 49 chr5_random 283313 283534 -2425246 + MER57A-int LTR ERV1 6924 7537 0 815 247 79 73 chr5_random 283568 283908 -2424872 + MER57A LTR ERV1 60 401 -2 22 70 0 0 chr5_random 284481 284524 -2424256 + AT_rich Low_complexity Low_complexity 1 43 0 1991 165 0 0 chr5_random 284558 284867 -2423913 - AluSx SINE Alu -3 309 1 2360 112 80 30 chr5_random 285164 285565 -2423215 - MSTA LTR MaLR 0 428 8 8377 181 36 3 chr5_random 285572 287170 -2421610 - MSTA-int LTR MaLR 0 1651 1 1839 171 139 5 chr5_random 287174 287549 -2421231 - MSTA LTR MaLR 0 428 4 201 121 0 0 chr5_random 288174 288207 -2420573 + (TG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr5_random 289577 289601 -2419179 + AT_rich Low_complexity Low_complexity 1 24 0 830 218 276 9 chr5_random 289735 290079 -2418701 + L1MD2 LINE L1 3870 4305 -1841 3834 226 111 23 chr5_random 290414 292281 -2416499 + L1MD2 LINE L1 4312 6359 0 22 35 0 0 chr5_random 292906 292935 -2415845 + AT_rich Low_complexity Low_complexity 1 29 0 23 86 0 0 chr5_random 293152 293210 -2415570 + AT_rich Low_complexity Low_complexity 1 58 0 213 121 0 0 chr5_random 293387 293420 -2415360 + (A)n Simple_repeat Simple_repeat 1 33 0 27 81 0 0 chr5_random 294098 294160 -2414620 + AT_rich Low_complexity Low_complexity 1 62 0 4417 181 20 8 chr5_random 294755 295651 -2413129 - L1M2 LINE L1 -1705 4441 3535 3020 189 6 3 chr5_random 295662 296286 -2412494 + L1M2 LINE L1 4426 5051 -1095 490 346 57 23 chr5_random 296337 296690 -2412090 - L1MEc LINE L1 -3432 2950 2586 30 59 0 0 chr5_random 296930 296981 -2411799 + AT_rich Low_complexity Low_complexity 1 51 0 569 313 86 53 chr5_random 297289 297857 -2410923 - HAL1b LINE L1 -696 652 66 27 49 0 0 chr5_random 298171 298212 -2410568 + AT_rich Low_complexity Low_complexity 1 41 0 327 262 87 14 chr5_random 298880 299123 -2409657 - L1MEc LINE L1 -4719 1663 1299 205 205 0 0 chr5_random 299123 299162 -2409618 + (TA)n Simple_repeat Simple_repeat 2 40 0 589 309 70 74 chr5_random 299176 299346 -2409434 - L1MEc LINE L1 -5128 1435 1266 2409 54 0 3 chr5_random 299346 299642 -2409138 - AluY SINE Alu -2 309 15 589 309 70 74 chr5_random 299642 299673 -2409107 - L1MEc LINE L1 -5297 1266 1236 1459 195 3 45 chr5_random 299673 299981 -2408799 - AluJo SINE Alu -17 295 1 589 309 70 74 chr5_random 299981 300402 -2408378 - L1MEc LINE L1 -5327 1236 814 2310 75 7 16 chr5_random 301392 301698 -2407082 + AluSp SINE Alu 1 303 -10 200 261 204 23 chr5_random 305110 305198 -2403582 + MIR SINE MIR 53 156 -106 21 0 0 0 chr5_random 305607 305628 -2403152 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5_random 306521 306558 -2402222 + (CA)n Simple_repeat Simple_repeat 1 37 0 685 181 0 22 chr5_random 307432 307570 -2401210 + FRAM SINE Alu 40 174 -2 40 21 0 0 chr5_random 308398 308445 -2400335 + AT_rich Low_complexity Low_complexity 1 47 0 895 160 123 0 chr5_random 309066 309253 -2399527 - L1MA7 LINE L1 0 6291 6082 * 2072 182 19 17 chr5_random 309236 309648 -2399132 + L1M2 LINE L1 5400 5812 -479 23 54 0 0 chr5_random 310019 310056 -2398724 + AT_rich Low_complexity Low_complexity 1 37 0 336 380 16 0 chr5_random 310057 310178 -2398602 + L2 LINE L2 3150 3272 0 759 310 74 42 chr5_random 310927 311401 -2397379 - L2 LINE L2 -2 3311 2823 1817 194 103 35 chr5_random 311526 312010 -2396770 - MLT2B1 LTR ERVL 0 520 4 23 33 0 0 chr5_random 312506 312536 -2396244 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5_random 313716 313744 -2395036 + AT_rich Low_complexity Low_complexity 1 28 0 3326 123 53 9 chr5_random 313876 314446 -2394334 + LTR49 LTR ERV1 1 595 0 21 36 0 0 chr5_random 316218 316246 -2392534 + AT_rich Low_complexity Low_complexity 1 28 0 2005 115 6 86 chr5_random 317576 317915 -2390865 - AluSq SINE Alu 0 313 2 244 349 0 0 chr5_random 317915 318001 -2390779 + MIR SINE MIR 97 182 -80 606 316 24 72 chr5_random 319487 319623 -2389157 + L2 LINE L2 2719 2860 -453 3569 219 98 16 chr5_random 319623 320584 -2388196 + MER45B DNA AcHobo 1 1040 0 606 316 24 72 chr5_random 320584 320945 -2387835 + L2 LINE L2 2860 3191 -122 38 51 0 0 chr5_random 321171 321230 -2387550 + AT_rich Low_complexity Low_complexity 1 59 0 477 104 0 0 chr5_random 322565 322581 -2386199 + (TA)n Simple_repeat Simple_repeat 1 93 0 477 104 0 0 chr5_random 322581 322658 -2386122 + (TA)n Simple_repeat Simple_repeat 2 78 0 1645 192 6 16 chr5_random 322838 323150 -2385630 - AluJb SINE Alu -1 311 3 2236 125 3 6 chr5_random 324140 324491 -2384289 - L1PB1 LINE L1 -3 6148 5799 308 110 43 37 chr5_random 324704 324868 -2383912 + (TTATA)n Simple_repeat Simple_repeat 5 169 0 275 112 102 0 chr5_random 324989 325127 -2383653 + (TA)n Simple_repeat Simple_repeat 1 152 0 274 128 58 41 chr5_random 325133 325305 -2383475 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 4237 217 11 4 chr5_random 325351 326336 -2382444 - L1 LINE L1 -745 5401 4410 21 0 0 0 chr5_random 328085 328106 -2380674 + AT_rich Low_complexity Low_complexity 1 21 0 299 197 80 131 chr5_random 379884 380021 -2328759 + MIR SINE MIR 112 241 -21 22 0 0 0 chr5_random 380981 381003 -2327777 + AT_rich Low_complexity Low_complexity 1 22 0 302 266 44 57 chr5_random 381117 381346 -2327434 + L1MCc LINE L1 20 245 -6178 1614 261 46 28 chr5_random 381833 382334 -2326446 + LTR40a LTR ERVL 7 516 -3 287 262 28 14 chr5_random 382720 382861 -2325919 + L1MCc LINE L1 1366 1508 -4915 28 61 0 0 chr5_random 382912 382961 -2325819 + AT_rich Low_complexity Low_complexity 1 49 0 26975 127 34 31 chr5_random 383147 388764 -2320016 + L1PA7 LINE L1 201 5977 -492 4644 75 2 0 chr5_random 388764 389350 -2319430 + LTR14C LTR ERVK 1 587 0 26975 127 34 31 chr5_random 389350 389845 -2318935 + L1PA7 LINE L1 5977 6469 0 6726 197 56 20 chr5_random 389846 392069 -2316711 + L1 LINE L1 2175 4434 -1712 3123 88 27 18 chr5_random 392069 392512 -2316268 - MLT2A2 LTR ERVL 0 453 7 15265 101 12 11 chr5_random 392512 394664 -2314116 - HERVL-A2 LTR ERVL -38 5616 3462 193 417 46 14 chr5_random 397389 397605 -2311175 + L3 LINE CR1 1278 1500 -77 1928 135 0 39 chr5_random 397704 398015 -2310765 + AluSx SINE Alu 1 299 -13 2617 269 14 36 chr5_random 398989 399969 -2308811 - L1ME1 LINE L1 -50 6116 5159 3772 182 28 16 chr5_random 399979 400753 -2308027 - L1MC3 LINE L1 -8 7777 6994 4545 210 73 27 chr5_random 400757 401997 -2306783 - L1MC3 LINE L1 -1136 6649 5353 389 264 24 18 chr5_random 401998 402165 -2306615 - L1MC3 LINE L1 -984 5162 4995 573 251 43 62 chr5_random 402167 402378 -2306402 - MER58C DNA MER1_type -5 210 4 3063 275 62 38 chr5_random 402381 402452 -2306328 - L1MC3 LINE L1 -1141 5005 4937 273 57 0 0 chr5_random 402452 402487 -2306293 + (TG)n Simple_repeat Simple_repeat 2 36 0 3063 275 62 38 chr5_random 402487 403662 -2305118 - L1MC3 LINE L1 -1209 4937 3701 1945 148 0 7 chr5_random 403662 403966 -2304814 - AluSg1 SINE Alu -7 302 1 3063 275 62 38 chr5_random 403966 404495 -2304285 - L1MC3 LINE L1 -2445 3701 3186 4169 185 74 45 chr5_random 405007 405965 -2302815 - MER52A LTR ERV1 -575 1180 217 207 69 0 0 chr5_random 406256 406285 -2302495 + (TC)n Simple_repeat Simple_repeat 2 30 0 22 80 0 0 chr5_random 407859 407909 -2300871 + AT_rich Low_complexity Low_complexity 1 50 0 25 0 0 0 chr5_random 407996 408021 -2300759 + AT_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr5_random 408077 408118 -2300662 + AT_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr5_random 408350 408382 -2300398 + AT_rich Low_complexity Low_complexity 1 32 0 2177 75 0 0 chr5_random 408690 408958 -2299822 + AluSx SINE Alu 31 298 -14 263 104 21 0 chr5_random 409119 409167 -2299613 + (CA)n Simple_repeat Simple_repeat 2 50 0 1423 204 42 74 chr5_random 410191 410648 -2298132 - MER39 LTR ERV1 0 707 266 23 78 0 0 chr5_random 411447 411498 -2297282 + AT_rich Low_complexity Low_complexity 1 51 0 371 316 18 0 chr5_random 412625 412739 -2296041 + L2 LINE L2 3189 3304 -9 33 56 0 0 chr5_random 413492 413546 -2295234 + AT_rich Low_complexity Low_complexity 1 54 0 31 58 0 0 chr5_random 413774 413826 -2294954 + AT_rich Low_complexity Low_complexity 1 52 0 186 43 0 0 chr5_random 414766 414789 -2293991 + (CA)n Simple_repeat Simple_repeat 2 24 0 943 272 84 57 chr5_random 414822 416092 -2292688 + L1MEc LINE L1 1535 2834 -3381 4790 173 24 8 chr5_random 416092 416985 -2291795 + L1MC1 LINE L1 5413 6319 -14 943 272 84 57 chr5_random 416985 417479 -2291301 + L1MEc LINE L1 2834 3313 -2902 235 213 0 0 chr5_random 417525 417572 -2291208 + (TG)n Simple_repeat Simple_repeat 2 48 0 1127 115 6 6 chr5_random 417658 417823 -2290957 - AluSg/x SINE Alu -20 292 128 774 304 61 24 chr5_random 417851 418672 -2290108 + L1ME LINE L1 4744 5612 -550 2003 161 58 44 chr5_random 418672 419100 -2289680 - Tigger2a DNA MER2_type 0 434 1 774 304 61 24 chr5_random 419100 419269 -2289511 + L1ME LINE L1 5612 5773 -389 409 348 38 24 chr5_random 419420 419713 -2289067 + L1MEc LINE L1 3471 3767 -2448 569 292 68 48 chr5_random 420153 420547 -2288233 + HAL1b LINE L1 280 681 -667 3466 169 83 11 chr5_random 420833 421529 -2287251 + Tigger1 DNA MER2_type 1673 2418 0 25 51 0 0 chr5_random 421653 421692 -2287088 + AT_rich Low_complexity Low_complexity 1 39 0 877 216 58 46 chr5_random 421728 421870 -2286910 - L1MC/D LINE L1 -494 5748 5600 2553 52 0 0 chr5_random 421870 422175 -2286605 - AluY SINE Alu -6 305 1 877 216 58 46 chr5_random 422175 422291 -2286489 - L1MC/D LINE L1 -642 5600 5487 4144 225 53 19 chr5_random 422309 423573 -2285207 - L1MA7 LINE L1 0 6291 4965 1464 113 0 19 chr5_random 423573 423785 -2284995 + AluSq SINE Alu 91 298 -15 4144 225 53 19 chr5_random 423785 424015 -2284765 - L1MA7 LINE L1 -1326 4965 4744 244 297 31 70 chr5_random 425257 425385 -2283395 - MIR3 SINE MIR -3 205 83 555 264 324 7 chr5_random 426004 426288 -2282492 + MLT1A2 LTR MaLR 1 374 0 1529 153 98 11 chr5_random 426947 427222 -2281558 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr5_random 428569 428604 -2280176 + AT_rich Low_complexity Low_complexity 1 35 0 1335 227 20 35 chr5_random 429594 429938 -2278842 + MER58B DNA MER1_type 3 341 0 2238 118 0 3 chr5_random 429971 430277 -2278503 - AluSg SINE Alu -5 305 1 24 53 0 0 chr5_random 431809 431847 -2276933 + AT_rich Low_complexity Low_complexity 1 38 0 1337 212 22 7 chr5_random 432244 432518 -2276262 + AluJo SINE Alu 1 278 -34 216 0 0 0 chr5_random 432522 432546 -2276234 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2172 121 0 6 chr5_random 432615 432929 -2275851 + AluSx SINE Alu 1 312 0 1952 104 28 0 chr5_random 433053 433340 -2275440 - L1PA13 LINE L1 -11 6152 5858 534 182 6 0 chr5_random 433340 433458 -2275322 + L1 LINE L1 5176 5298 -848 390 341 62 6 chr5_random 433496 433675 -2275105 - MIR SINE MIR -37 225 37 21 36 0 0 chr5_random 434306 434334 -2274446 + AT_rich Low_complexity Low_complexity 1 28 0 1622 214 64 41 chr5_random 434613 435052 -2273728 - MLT1C LTR MaLR -18 449 1 2223 91 24 0 chr5_random 435308 435604 -2273176 - AluSp SINE Alu -10 303 1 1466 164 7 47 chr5_random 435657 435744 -2273036 + AluJb SINE Alu 39 128 -184 297 0 0 0 chr5_random 435744 435777 -2273003 + (CA)n Simple_repeat Simple_repeat 2 34 0 1466 164 7 47 chr5_random 435777 435964 -2272816 + AluJb SINE Alu 128 302 -10 34 42 0 0 chr5_random 436321 436369 -2272411 + AT_rich Low_complexity Low_complexity 1 48 0 231 125 0 0 chr5_random 436988 437028 -2271752 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 1882 215 41 12 chr5_random 438293 438707 -2270073 + MSTB LTR MaLR 1 426 0 2033 155 10 48 chr5_random 439167 439581 -2269199 - L1MB5 LINE L1 -8 6166 5769 392 173 129 2 chr5_random 439740 439844 -2268936 - MLT1C LTR MaLR -271 119 3 521 270 21 49 chr5_random 439848 440003 -2268777 - L1ME LINE L1 -5089 981 836 601 220 0 28 chr5_random 440003 440144 -2268636 + L1MB5 LINE L1 6021 6157 -17 521 270 21 49 chr5_random 440144 440273 -2268507 - L1ME LINE L1 -5234 836 705 1297 206 60 55 chr5_random 440524 440907 -2267873 + MLT1B LTR MaLR 4 388 -2 751 209 44 73 chr5_random 441328 441594 -2267186 - MLT1E2 LTR MaLR -207 298 21 23 33 0 0 chr5_random 441611 441641 -2267139 + AT_rich Low_complexity Low_complexity 1 30 0 2380 74 0 10 chr5_random 442156 442468 -2266312 + AluY SINE Alu 1 309 -2 1444 145 0 9 chr5_random 442853 443074 -2265706 + AluSg/x SINE Alu 87 305 -5 385 296 26 9 chr5_random 443074 443189 -2265591 + L2 LINE L2 3197 3313 0 29 47 0 0 chr5_random 444600 444643 -2264137 + AT_rich Low_complexity Low_complexity 1 43 0 666 247 44 78 chr5_random 445048 445344 -2263436 - LTR16A1 LTR ERVL -3 454 169 754 241 19 12 chr5_random 445750 445912 -2262868 - AluJo SINE Alu -66 246 84 1991 112 87 34 chr5_random 446273 446629 -2262151 + THE1C LTR MaLR 1 375 0 30 0 0 0 chr5_random 447216 447246 -2261534 + AT_rich Low_complexity Low_complexity 1 30 0 23 68 0 0 chr5_random 447960 448004 -2260776 + AT_rich Low_complexity Low_complexity 1 44 0 2310 109 3 49 chr5_random 448022 448262 -2260518 + THE1A LTR MaLR 1 220 -135 1967 153 3 0 chr5_random 448262 448557 -2260223 + AluSx SINE Alu 3 298 -14 2310 109 3 49 chr5_random 448557 448684 -2260096 + THE1A LTR MaLR 220 351 -4 11274 102 12 1 chr5_random 448687 450249 -2258531 + THE1A-int LTR MaLR 1 1580 0 2401 99 38 0 chr5_random 450249 450591 -2258189 + THE1A LTR MaLR 1 355 0 1181 178 34 67 chr5_random 450591 450860 -2257920 - AluJo SINE Alu -52 260 1 22 70 0 0 chr5_random 452087 452130 -2256650 + AT_rich Low_complexity Low_complexity 1 43 0 188 354 21 10 chr5_random 452168 452264 -2256516 - L2 LINE L2 -654 2660 2564 1354 142 16 12 chr5_random 453540 453793 -2254987 - L1MA5A LINE L1 0 6297 6044 546 341 12 36 chr5_random 455915 456167 -2252613 + L2 LINE L2 2599 2844 -470 203 323 146 10 chr5_random 456220 456316 -2252464 + L2 LINE L2 2925 3033 -239 1025 326 28 24 chr5_random 456647 457107 -2251673 - LTR33 LTR ERVL -41 480 19 22 35 0 0 chr5_random 457658 457687 -2251093 + AT_rich Low_complexity Low_complexity 1 29 0 730 204 14 0 chr5_random 458187 458334 -2250446 + FRAM SINE Alu 19 167 -9 290 353 102 26 chr5_random 459080 459383 -2249397 - L2 LINE L2 -778 2536 2211 261 118 176 0 chr5_random 459888 459939 -2248841 - LTR40b LTR ERVL -21 441 382 1534 166 68 28 chr5_random 460047 460373 -2248407 - MER44D DNA MER2_type 0 609 1 764 339 237 12 chr5_random 460456 461468 -2247312 + L2 LINE L2 1294 2533 -781 2066 191 28 34 chr5_random 461729 462196 -2246584 + MER31B LTR ERV1 1 464 -2 250 321 58 15 chr5_random 462381 462518 -2246262 + L2 LINE L2 3163 3305 -8 202 152 0 65 chr5_random 462545 462591 -2246189 + A-rich Low_complexity Low_complexity 6 48 0 2195 117 7 3 chr5_random 462801 463110 -2245670 + AluSx SINE Alu 1 310 -2 793 98 26 20 chr5_random 463684 463837 -2244943 + GA-rich Low_complexity Low_complexity 3 156 0 29 60 0 0 chr5_random 464470 464520 -2244260 + AT_rich Low_complexity Low_complexity 1 50 0 211 200 44 0 chr5_random 464954 464999 -2243781 - L2 LINE L2 0 3313 3267 255 133 0 0 chr5_random 465059 465104 -2243676 + (TG)n Simple_repeat Simple_repeat 2 46 0 298 313 36 0 chr5_random 466968 467080 -2241700 + MER20B DNA MER1_type 31 146 -637 751 266 200 7 chr5_random 467116 467541 -2241239 + MER20B DNA MER1_type 274 780 -3 203 220 17 85 chr5_random 467575 467634 -2241146 + MIR SINE MIR 17 71 -137 505 143 33 11 chr5_random 467855 467946 -2240834 + Tigger5 DNA MER2_type 2231 2323 0 1136 226 89 27 chr5_random 468230 468601 -2240179 - L1MD2 LINE L1 -355 6264 5871 1793 166 49 30 chr5_random 468663 469031 -2239749 + THE1C LTR MaLR 1 375 0 1444 111 5 5 chr5_random 469034 469251 -2239529 + THE1C-int LTR MaLR 4 220 -1360 769 133 0 8 chr5_random 469251 469371 -2239409 - L1MC1 LINE L1 -180 6153 6035 1761 228 122 16 chr5_random 469374 469571 -2239209 + MLT2B2 LTR ERVL 1 176 -339 880 118 0 13 chr5_random 469571 469723 -2239057 + (TTTC)n Simple_repeat Simple_repeat 1 150 0 1933 114 0 0 chr5_random 469723 469978 -2238802 - AluSx SINE Alu -40 272 18 1761 228 122 16 chr5_random 469978 470223 -2238557 + MLT2B2 LTR ERVL 175 491 -24 946 184 26 21 chr5_random 470344 470534 -2238246 - L1MD2 LINE L1 -760 5833 5643 * 1177 234 78 45 chr5_random 470527 471108 -2237672 - L1MD2 LINE L1 -4619 1787 1185 * 5048 160 32 13 chr5_random 471092 472390 -2236390 - L1PA15 LINE L1 -6 6159 4836 1933 203 23 25 chr5_random 472394 472876 -2235904 - L1MD2 LINE L1 -5183 1226 746 687 308 14 5 chr5_random 472930 473151 -2235629 + MLT1D-int LTR MaLR 661 883 -488 863 272 27 127 chr5_random 473250 473732 -2235048 + MLT1D-int LTR MaLR 938 1371 0 1358 237 112 51 chr5_random 473737 474209 -2234571 + MLT1D LTR MaLR 5 505 0 26 30 0 0 chr5_random 474350 474383 -2234397 + AT_rich Low_complexity Low_complexity 1 33 0 513 288 56 4 chr5_random 474497 474747 -2234033 - L1M4 LINE L1 -2662 3484 3222 403 212 26 18 chr5_random 474741 474854 -2233926 - L1M4 LINE L1 -1593 4553 4440 * 594 301 61 18 chr5_random 474856 475085 -2233695 + LTR40a LTR ERVL 1 239 -280 3253 201 26 3 chr5_random 475093 475699 -2233081 + L1M3f LINE L1 1240 1859 -4706 833 281 48 37 chr5_random 475682 476117 -2232663 + L1M3f LINE L1 3000 3439 -4126 * 378 244 130 8 chr5_random 478143 478266 -2230514 + MIR SINE MIR 5 142 -120 216 326 54 41 chr5_random 478463 478610 -2230170 + MIR SINE MIR 68 216 -46 31 0 0 0 chr5_random 478632 478663 -2230117 + AT_rich Low_complexity Low_complexity 1 31 0 767 343 47 36 chr5_random 479550 480023 -2228757 + HAL1 LINE L1 37 514 -1993 1296 214 0 30 chr5_random 480177 480472 -2228308 + AluJo SINE Alu 12 297 -15 391 319 30 24 chr5_random 480525 480691 -2228089 + HAL1 LINE L1 745 911 -1596 9281 177 91 41 chr5_random 480707 482760 -2226020 + L1MC1 LINE L1 21 2206 -4220 2291 116 0 0 chr5_random 482760 483070 -2225710 + AluSg SINE Alu 1 310 0 9281 177 91 41 chr5_random 483070 483359 -2225421 + L1MC1 LINE L1 2206 2479 -3947 2804 276 26 8 chr5_random 483398 484442 -2224338 + L1MC1 LINE L1 2566 3628 -2798 * 3097 245 21 39 chr5_random 484435 485573 -2223207 + L1MC1 LINE L1 4432 5530 -896 5421 185 21 9 chr5_random 485589 486651 -2222129 + L1MC1 LINE L1 5534 6607 -6 1890 114 14 7 chr5_random 486651 486932 -2221848 + AluSg1 SINE Alu 1 283 -26 28 29 0 0 chr5_random 486932 486967 -2221813 + AT_rich Low_complexity Low_complexity 1 35 0 586 248 124 31 chr5_random 487054 487377 -2221403 + HAL1 LINE L1 1243 1595 -912 21 0 0 0 chr5_random 487691 487712 -2221068 + AT_rich Low_complexity Low_complexity 1 21 0 752 262 125 37 chr5_random 487886 487901 -2220879 + HAL1 LINE L1 1971 1983 -524 1890 133 6 31 chr5_random 487901 488218 -2220562 + AluSq SINE Alu 1 309 -4 752 262 125 37 chr5_random 488218 488683 -2220097 + HAL1 LINE L1 1983 2493 -14 1175 266 31 37 chr5_random 488975 489329 -2219451 + MLT1A2 LTR MaLR 4 355 -19 25 31 0 0 chr5_random 490482 490514 -2218266 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5_random 490532 490561 -2218219 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5_random 490568 490596 -2218184 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5_random 490840 490862 -2217918 + AT_rich Low_complexity Low_complexity 1 22 0 257 350 41 32 chr5_random 491421 491544 -2217236 - L2 LINE L2 -13 3300 3177 1315 68 78 21 chr5_random 491595 491786 -2216994 + AluY SINE Alu 1 202 -109 23 68 0 0 chr5_random 492624 492668 -2216112 + AT_rich Low_complexity Low_complexity 1 44 0 274 319 30 22 chr5_random 493201 493336 -2215444 - L2 LINE L2 -1213 2101 1966 683 237 29 29 chr5_random 493768 494013 -2214767 + L1MDa LINE L1 1860 2104 -4436 * 2632 263 81 14 chr5_random 494011 494692 -2214088 + L1MDa LINE L1 3164 3949 -2591 2325 100 0 3 chr5_random 494692 495002 -2213778 + AluSx SINE Alu 1 309 -3 2632 263 81 14 chr5_random 495002 495432 -2213348 + L1MDa LINE L1 3949 4349 -2191 183 114 0 0 chr5_random 496547 496582 -2212198 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5_random 496819 496847 -2211933 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5_random 497857 497878 -2210902 + AT_rich Low_complexity Low_complexity 1 21 0 618 303 108 25 chr5_random 499175 499452 -2209328 + MLT1I LTR MaLR 1 300 -109 30 0 0 0 chr5_random 499802 499832 -2208948 + AT_rich Low_complexity Low_complexity 1 30 0 542 296 59 16 chr5_random 499974 500344 -2208436 - L1ME LINE L1 -523 5641 5254 398 358 37 54 chr5_random 500547 500952 -2207828 - LTR16C LTR ERVL -90 401 4 2310 164 39 33 chr5_random 500979 501343 -2207437 + LOR1b LTR ERV1 1 370 -91 2049 128 0 13 chr5_random 501343 501648 -2207132 + AluSx SINE Alu 3 303 -9 2310 164 39 33 chr5_random 501648 501741 -2207039 + LOR1b LTR ERV1 370 461 0 189 0 0 0 chr5_random 501770 501791 -2206989 + (T)n Simple_repeat Simple_repeat 1 21 0 242 233 0 0 chr5_random 502501 502544 -2206236 + MLT2E LTR ERVL 32 74 -554 1611 176 27 62 chr5_random 502702 503106 -2205674 - MLT1B LTR MaLR 0 390 1 1923 152 7 3 chr5_random 503211 503514 -2205266 - AluSx SINE Alu -7 305 2 1276 168 41 2 chr5_random 503703 503970 -2204810 - MLT1B LTR MaLR 0 390 58 537 101 0 0 chr5_random 503970 504049 -2204731 - MADE1 DNA Mariner 0 80 2 355 87 0 0 chr5_random 504056 504102 -2204678 - MLT1B LTR MaLR -340 50 5 266 106 21 0 chr5_random 504105 504152 -2204628 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 235 280 28 47 chr5_random 504153 504260 -2204520 - L1MC4 LINE L1 -146 7896 7792 219 250 0 0 chr5_random 504265 504313 -2204467 + T-rich Low_complexity Low_complexity 3 50 0 431 146 7 26 chr5_random 504313 504463 -2204317 + CT-rich Low_complexity Low_complexity 1 147 0 1291 234 55 12 chr5_random 504468 504814 -2203966 - MLT1A1 LTR MaLR 0 365 5 470 271 6 71 chr5_random 505082 505118 -2203662 + MLT1E1 LTR MaLR 1 38 -616 1658 186 45 14 chr5_random 505118 505472 -2203308 - MLT1A1 LTR MaLR 0 365 1 470 271 6 71 chr5_random 505472 505605 -2203175 + MLT1E1 LTR MaLR 38 159 -495 * 588 279 46 82 chr5_random 505578 505954 -2202826 + MLT1E1 LTR MaLR 119 563 -91 1512 211 111 117 chr5_random 505957 506145 -2202635 + LTR1B LTR ERV1 1 189 -637 354 23 0 0 chr5_random 506145 506188 -2202592 + (CA)n Simple_repeat Simple_repeat 2 44 0 1512 211 111 117 chr5_random 506188 506830 -2201950 + LTR1B LTR ERV1 189 826 0 855 219 28 0 chr5_random 506856 507034 -2201746 - MSTD LTR MaLR 0 396 214 350 217 0 147 chr5_random 507380 507509 -2201271 - MSTD LTR MaLR -302 126 17 435 144 0 216 chr5_random 507572 507697 -2201083 - MSTC LTR MaLR -334 98 1 391 155 48 39 chr5_random 507697 507767 -2201013 + MLT1D LTR MaLR 435 505 0 779 224 23 6 chr5_random 507788 507962 -2200818 + MER20 DNA MER1_type 43 219 0 534 295 109 19 chr5_random 509363 509573 -2199207 - MIR SINE MIR -21 241 13 246 328 76 28 chr5_random 510023 510265 -2198515 - L1MEc LINE L1 -4320 2818 2558 534 103 0 0 chr5_random 510265 510343 -2198437 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 246 328 76 28 chr5_random 510343 510390 -2198390 - L1MEc LINE L1 -4580 2558 2515 1523 175 20 18 chr5_random 510747 511077 -2197703 + MER61B LTR ERV1 1 425 0 1848 267 37 3 chr5_random 511077 511646 -2197134 - L1MEc LINE L1 -4696 2263 1676 528 216 72 8 chr5_random 511646 511771 -2197009 + FLAM_A SINE Alu 1 133 0 207 0 0 0 chr5_random 511798 511821 -2196959 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 346 181 26 35 chr5_random 511850 511966 -2196814 - L1MEc LINE L1 -5179 1680 1566 * 1331 213 38 3 chr5_random 511964 512255 -2196525 - L1MEc LINE L1 -5707 1152 852 1610 148 26 22 chr5_random 512255 512599 -2196181 - MER4A LTR ERV1 0 664 261 612 130 0 20 chr5_random 512599 512699 -2196081 - MER4A LTR ERV1 -566 98 1 658 264 41 14 chr5_random 512723 513279 -2195501 - L1MEc LINE L1 -6059 800 4 833 289 0 0 chr5_random 513565 513856 -2194924 - AluSc SINE Alu -3 306 16 189 0 0 0 chr5_random 513864 513885 -2194895 + (C)n Simple_repeat Simple_repeat 1 21 0 2256 100 0 0 chr5_random 514583 514874 -2193906 - AluSc SINE Alu -4 305 15 22 35 0 0 chr5_random 514960 514989 -2193791 + AT_rich Low_complexity Low_complexity 1 29 0 230 303 15 0 chr5_random 515087 515153 -2193627 - L2 LINE L2 0 3313 3247 421 381 88 16 chr5_random 515680 516113 -2192667 - L2 LINE L2 -667 2647 2184 1351 39 11 6 chr5_random 516848 517026 -2191754 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 773 11 0 11 chr5_random 517138 517233 -2191547 + (TTTC)n Simple_repeat Simple_repeat 1 94 0 216 97 0 0 chr5_random 517669 517700 -2191080 + (CATATA)n Simple_repeat Simple_repeat 4 34 0 1665 167 7 20 chr5_random 518072 518371 -2190409 + AluJo SINE Alu 1 295 -17 26 0 0 0 chr5_random 519070 519096 -2189684 + AT_rich Low_complexity Low_complexity 1 26 0 24 67 0 0 chr5_random 519480 519525 -2189255 + AT_rich Low_complexity Low_complexity 1 45 0 1822 142 3 42 chr5_random 519529 519839 -2188941 - AluSx SINE Alu -14 298 1 209 309 95 56 chr5_random 521532 521658 -2187122 + MIR SINE MIR 18 148 -60 25 31 0 0 chr5_random 521723 521755 -2187025 + AT_rich Low_complexity Low_complexity 1 32 0 343 351 63 24 chr5_random 522301 522506 -2186274 + MIR SINE MIR 37 249 -13 432 0 0 0 chr5_random 523210 523258 -2185522 + (TG)n Simple_repeat Simple_repeat 2 49 0 2025 72 68 4 chr5_random 523299 523578 -2185202 - AluY SINE Alu -14 297 1 246 293 12 24 chr5_random 524681 524763 -2184017 + L2 LINE L2 3232 3312 -1 21 0 0 0 chr5_random 524879 524900 -2183880 + AT_rich Low_complexity Low_complexity 1 21 0 1053 216 0 18 chr5_random 527555 527777 -2181003 - AluJo SINE Alu -8 304 87 22 35 0 0 chr5_random 528039 528068 -2180712 + AT_rich Low_complexity Low_complexity 1 29 0 576 138 0 43 chr5_random 528099 528193 -2180587 + 5S rRNA rRNA 1 90 -31 604 321 118 23 chr5_random 528812 529161 -2179619 - MLT1I LTR MaLR -12 397 16 341 314 178 43 chr5_random 529183 529667 -2179113 - L1ME4a LINE L1 -226 5895 5347 26 30 0 0 chr5_random 529779 529812 -2178968 + AT_rich Low_complexity Low_complexity 1 33 0 3546 179 26 38 chr5_random 529895 529937 -2178843 + L1PA16 LINE L1 5437 5478 -688 2208 106 3 3 chr5_random 529937 530239 -2178541 - AluSp SINE Alu -11 302 1 3546 179 26 38 chr5_random 530239 530927 -2177853 + L1PA16 LINE L1 5478 6158 -8 338 280 70 38 chr5_random 531105 531291 -2177489 - L1M4 LINE L1 -3824 2322 2131 216 222 56 19 chr5_random 531671 531725 -2177055 - L2 LINE L2 -5 3308 3253 2077 134 45 31 chr5_random 532077 532436 -2176344 + THE1B LTR MaLR 1 364 0 282 281 54 48 chr5_random 534946 535113 -2173667 + MLT1J2 LTR MaLR 283 450 0 1071 219 19 5 chr5_random 535691 535901 -2172879 - MER58A DNA MER1_type -11 213 1 592 88 0 0 chr5_random 537089 537169 -2171611 + AluY SINE Alu 1 80 -230 322 83 17 0 chr5_random 537170 537230 -2171550 + L1PA6 LINE L1 6094 6154 0 1800 80 0 0 chr5_random 537234 537460 -2171320 + AluSg/x SINE Alu 82 307 -5 22 35 0 0 chr5_random 537890 537919 -2170861 + AT_rich Low_complexity Low_complexity 1 29 0 214 241 36 27 chr5_random 538580 538692 -2170088 + (CATATA)n Simple_repeat Simple_repeat 4 116 0 2169 126 0 13 chr5_random 538800 539110 -2169670 + AluSg SINE Alu 1 306 -4 418 313 27 7 chr5_random 540645 540795 -2167985 - MIR SINE MIR 0 262 110 783 262 13 31 chr5_random 541339 541564 -2167216 + MIR SINE MIR 41 261 -1 2080 98 7 3 chr5_random 543387 543672 -2165108 + AluSp SINE Alu 1 286 -27 406 125 39 10 chr5_random 543672 543770 -2165010 + (TA)n Simple_repeat Simple_repeat 2 102 0 21 82 0 0 chr5_random 544414 544463 -2164317 + AT_rich Low_complexity Low_complexity 1 49 0 369 236 158 0 chr5_random 545685 545812 -2162968 - MLT1J LTR MaLR -339 172 26 217 342 25 25 chr5_random 545958 546078 -2162702 + MIR3 SINE MIR 2 121 -87 2292 97 0 3 chr5_random 548866 549174 -2159606 + AluSc SINE Alu 3 309 0 412 365 116 31 chr5_random 549641 550055 -2158725 - L3 LINE CR1 -219 1358 910 188 246 9 27 chr5_random 550073 550183 -2158597 + CT-rich Low_complexity Low_complexity 4 111 0 225 94 0 0 chr5_random 550599 550631 -2158149 + (T)n Simple_repeat Simple_repeat 1 32 0 397 326 81 66 chr5_random 550645 551249 -2157531 - HAL1 LINE L1 -1053 1454 842 208 147 0 0 chr5_random 552192 552226 -2156554 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 25 65 0 0 chr5_random 556022 556068 -2152712 + AT_rich Low_complexity Low_complexity 1 46 0 324 253 90 39 chr5_random 556331 556509 -2152271 + L1ME4a LINE L1 5930 6116 -5 24 67 0 0 chr5_random 558038 558083 -2150697 + AT_rich Low_complexity Low_complexity 1 45 0 2167 250 44 44 chr5_random 558334 559450 -2149330 - L1ME1 LINE L1 -55 6111 4997 2230 69 45 0 chr5_random 559450 559739 -2149041 - AluSc SINE Alu -7 302 1 2167 250 44 44 chr5_random 559739 559793 -2148987 - L1ME1 LINE L1 -1169 4997 4945 351 44 0 0 chr5_random 559793 559838 -2148942 + (TC)n Simple_repeat Simple_repeat 2 46 0 225 83 0 0 chr5_random 559838 559874 -2148906 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 2167 250 44 44 chr5_random 559874 559969 -2148811 - L1ME1 LINE L1 -1220 4946 4848 310 242 0 74 chr5_random 560013 560108 -2148672 - L1MC4 LINE L1 -1343 6699 6612 347 277 43 11 chr5_random 560160 560254 -2148526 - L1ME1 LINE L1 -1302 4844 4748 4584 221 33 20 chr5_random 560272 561980 -2146800 - L1M3 LINE L1 -435 5748 4018 192 158 0 0 chr5_random 562525 562563 -2146217 + T-rich Low_complexity Low_complexity 1 38 0 2130 103 3 0 chr5_random 562987 563279 -2145501 - AluSc SINE Alu -16 293 1 180 77 0 0 chr5_random 563881 563907 -2144873 + (TTATA)n Simple_repeat Simple_repeat 2 27 0 33 25 0 0 chr5_random 563958 563998 -2144782 + AT_rich Low_complexity Low_complexity 1 40 0 216 158 0 0 chr5_random 564726 564764 -2144016 + CT-rich Low_complexity Low_complexity 3 40 0 199 359 146 24 chr5_random 565220 565432 -2143348 + MIR SINE MIR 19 256 -6 1786 154 13 19 chr5_random 565482 565694 -2143086 - Tigger3b DNA MER2_type -1798 1230 1018 2091 114 7 0 chr5_random 565694 566006 -2142774 + AluSg SINE Alu 1 314 0 1786 154 13 19 chr5_random 566006 566103 -2142677 - Tigger3b DNA MER2_type -2010 1018 922 1386 173 0 21 chr5_random 566103 566340 -2142440 - AluJo SINE Alu -80 232 1 3545 124 67 87 chr5_random 566340 567141 -2141639 - Tigger3b DNA MER2_type -445 786 2 330 132 0 0 chr5_random 567143 567196 -2141584 + (CA)n Simple_repeat Simple_repeat 2 54 0 325 219 14 14 chr5_random 567217 567290 -2141490 + Tigger5 DNA MER2_type 2250 2322 -1 519 187 11 0 chr5_random 567345 567436 -2141344 + Tigger5 DNA MER2_type 2231 2322 -1 447 19 0 0 chr5_random 567437 567489 -2141291 + (TG)n Simple_repeat Simple_repeat 1 52 0 1022 96 0 0 chr5_random 567509 567644 -2141136 - AluSx SINE Alu -155 157 23 2118 119 10 0 chr5_random 568087 568389 -2140391 - AluSx SINE Alu -7 305 1 228 135 0 0 chr5_random 568879 568916 -2139864 + (TA)n Simple_repeat Simple_repeat 2 38 0 2265 200 26 70 chr5_random 569806 570375 -2138405 - MER44D DNA MER2_type -6 599 1 318 331 49 14 chr5_random 570517 570659 -2138121 + MLT1K LTR MaLR 334 480 -108 23 33 0 0 chr5_random 571186 571216 -2137564 + AT_rich Low_complexity Low_complexity 1 30 0 22 80 0 0 chr5_random 571554 571604 -2137176 + AT_rich Low_complexity Low_complexity 1 50 0 217 246 0 0 chr5_random 572085 572142 -2136638 + T-rich Low_complexity Low_complexity 1 57 0 274 253 75 41 chr5_random 572915 573061 -2135719 + MER103 DNA DNA 6 156 -10 22 35 0 0 chr5_random 573377 573406 -2135374 + AT_rich Low_complexity Low_complexity 1 29 0 542 217 19 0 chr5_random 573729 573835 -2134945 + MSTC LTR MaLR 1 108 -320 2737 153 32 20 chr5_random 573850 574387 -2134393 - L1MA7 LINE L1 -2 6289 5747 3127 195 8 14 chr5_random 574394 575041 -2133739 - L1MA7 LINE L1 -909 5237 4595 215 169 28 56 chr5_random 575151 575222 -2133558 + (TTTA)n Simple_repeat Simple_repeat 3 71 0 27 0 0 0 chr5_random 576698 576725 -2132055 + AT_rich Low_complexity Low_complexity 1 27 0 1828 194 25 19 chr5_random 576966 577327 -2131453 + MLT1A1 LTR MaLR 3 365 0 222 91 0 0 chr5_random 577360 577393 -2131387 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 2923 107 137 77 chr5_random 577496 577750 -2131030 + MER4A LTR ERV1 1 238 -426 4673 82 61 6 chr5_random 577750 578434 -2130346 - LTR30 LTR ERV1 0 722 1 2923 107 137 77 chr5_random 578434 578805 -2129975 + MER4A LTR ERV1 238 664 0 198 171 0 0 chr5_random 578971 579012 -2129768 + T-rich Low_complexity Low_complexity 1 41 0 539 358 26 18 chr5_random 579456 579685 -2129095 - MIR SINE MIR -30 232 2 26 0 0 0 chr5_random 580406 580432 -2128348 + AT_rich Low_complexity Low_complexity 1 26 0 327 25 0 0 chr5_random 580493 580533 -2128247 + (TA)n Simple_repeat Simple_repeat 2 41 0 265 171 87 0 chr5_random 581030 581096 -2127684 + MER58 DNA MER1_type 46 106 -109 2788 302 65 37 chr5_random 581175 582765 -2126015 + L1PA15-16 LINE L1 1 1623 -5227 * 5128 189 57 32 chr5_random 582747 583907 -2124873 + L1PBb LINE L1 15 1145 -5059 306 0 0 0 chr5_random 583907 583941 -2124839 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1965 50 69 11 chr5_random 583943 584204 -2124576 - AluY SINE Alu -31 280 5 5128 189 57 32 chr5_random 584204 585023 -2123757 + L1PBb LINE L1 1145 2041 -4163 7524 239 35 14 chr5_random 585026 587433 -2121347 - L1PA15-16 LINE L1 -1508 5341 2903 1357 191 19 27 chr5_random 587433 587695 -2121085 - AluJb SINE Alu -52 260 1 2921 259 28 18 chr5_random 587695 588639 -2120141 - L1PA15-16 LINE L1 -3956 2893 1941 1554 157 21 11 chr5_random 588652 588938 -2119842 + L1PB3 LINE L1 5866 6154 0 22 0 0 0 chr5_random 589495 589517 -2119263 + AT_rich Low_complexity Low_complexity 1 22 0 9837 71 39 12 chr5_random 590712 592061 -2116719 - SVA Other Other 0 1386 2 222 37 0 0 chr5_random 592062 592089 -2116691 + (AGGGGG)n Simple_repeat Simple_repeat 3 29 0 21 0 0 0 chr5_random 593022 593043 -2115737 + AT_rich Low_complexity Low_complexity 1 21 0 2559 211 45 30 chr5_random 593255 593895 -2114885 + L1MA10 LINE L1 5668 6317 -17 700 202 107 23 chr5_random 593895 594157 -2114623 + Charlie5 DNA MER1_type 2222 2505 -107 862 258 17 19 chr5_random 594500 594848 -2113932 + MER101B LTR ERV1 1 419 -55 4711 35 0 2 chr5_random 595180 595932 -2112848 - L1PA4 LINE L1 -585 5570 4820 4923 36 0 0 chr5_random 595932 596513 -2112267 + L1PA4 LINE L1 5570 6152 -3 348 43 0 0 chr5_random 597494 597540 -2111240 + (CA)n Simple_repeat Simple_repeat 2 47 0 246 282 13 13 chr5_random 598613 598691 -2110089 + GA-rich Low_complexity Low_complexity 1 78 0 226 200 22 0 chr5_random 598945 598990 -2109790 + MLT1K LTR MaLR 522 567 -21 27 73 0 0 chr5_random 600765 600820 -2107960 + AT_rich Low_complexity Low_complexity 1 55 0 4959 140 66 43 chr5_random 600935 601894 -2106886 + Tigger1 DNA MER2_type 1438 2418 0 25 0 0 0 chr5_random 602247 602272 -2106508 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr5_random 602774 602809 -2105971 + AT_rich Low_complexity Low_complexity 1 35 0 635 311 52 8 chr5_random 603119 603370 -2105410 - LTR16B LTR ERVL -138 326 65 265 193 25 50 chr5_random 603441 603560 -2105220 + (TTTA)n Simple_repeat Simple_repeat 4 119 0 248 220 34 0 chr5_random 603582 603641 -2105139 + (TATG)n Simple_repeat Simple_repeat 3 63 0 947 148 85 32 chr5_random 603651 603840 -2104940 - AluJo SINE Alu -21 291 93 10444 236 94 99 chr5_random 603851 606929 -2101851 - MER66B-int LTR ERV1 -570 6106 3071 1829 147 38 3 chr5_random 606929 607222 -2101558 + AluSx SINE Alu 1 303 -9 10444 236 94 99 chr5_random 607222 610033 -2098747 - MER66B-int LTR ERV1 -3605 3071 247 690 180 41 0 chr5_random 610034 610156 -2098624 - FLAM_C SINE Alu -16 127 1 632 245 28 56 chr5_random 610160 610409 -2098371 - MER66B-int LTR ERV1 -6424 252 11 2015 152 46 3 chr5_random 610412 610761 -2098019 + THE1B LTR MaLR 1 364 0 9643 132 49 1 chr5_random 610761 612264 -2096516 + THE1B-int LTR MaLR 1 1574 -6 2174 142 34 3 chr5_random 612271 612623 -2096157 + THE1B LTR MaLR 2 364 0 253 143 24 0 chr5_random 612636 612678 -2096102 - MER66B LTR ERV1 0 486 444 * 1917 158 32 26 chr5_random 612672 613020 -2095760 - THE1B LTR MaLR -14 350 1 * 2126 187 12 8 chr5_random 613020 613418 -2095362 - MER66B LTR ERV1 -59 427 28 381 258 144 0 chr5_random 613503 613635 -2095145 - L1M4 LINE L1 -2929 3217 3067 1954 150 47 8 chr5_random 615307 615668 -2093112 + THE1C LTR MaLR 1 375 0 383 0 21 0 chr5_random 616603 616650 -2092130 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 435 268 78 26 chr5_random 616858 617011 -2091769 - MER5B DNA MER1_type -17 161 1 210 191 0 0 chr5_random 617341 617388 -2091392 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 27 62 0 0 chr5_random 617428 617476 -2091304 + AT_rich Low_complexity Low_complexity 1 48 0 237 240 142 66 chr5_random 617819 618002 -2090778 - L1ME3A LINE L1 -15 6155 5959 297 269 172 0 chr5_random 618428 618562 -2090218 + MLT1H1 LTR MaLR 399 555 0 1978 158 7 0 chr5_random 618727 619037 -2089743 + AluSx SINE Alu 1 312 0 353 94 250 0 chr5_random 619166 619230 -2089550 + MADE1 DNA Mariner 1 80 0 1025 281 58 6 chr5_random 619597 619910 -2088870 - MER93a LTR ERV1 0 402 74 259 290 72 57 chr5_random 620365 620558 -2088222 + MLT1-int LTR MaLR 1175 1370 -1 24 0 0 0 chr5_random 621131 621155 -2087625 + AT_rich Low_complexity Low_complexity 1 24 0 243 333 81 0 chr5_random 621466 621577 -2087203 - L2 LINE L2 -505 2809 2690 433 345 132 7 chr5_random 621653 622049 -2086731 - L2 LINE L2 -1027 2287 1784 27 29 0 0 chr5_random 622654 622688 -2086092 + AT_rich Low_complexity Low_complexity 1 34 0 273 299 15 41 chr5_random 622877 623074 -2085706 - L1ME3A LINE L1 -1928 5880 5689 209 145 65 0 chr5_random 623277 623339 -2085441 + (TA)n Simple_repeat Simple_repeat 1 66 0 28 48 0 0 chr5_random 623424 623466 -2085314 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr5_random 623886 623917 -2084863 + AT_rich Low_complexity Low_complexity 1 31 0 180 152 0 0 chr5_random 625444 625477 -2083303 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 367 310 33 5 chr5_random 625482 625666 -2083114 + L1ME LINE L1 5586 5774 -347 217 122 20 41 chr5_random 626157 626206 -2082574 + GA-rich Low_complexity Low_complexity 1 48 0 390 91 0 0 chr5_random 626351 626406 -2082374 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1829 149 0 7 chr5_random 626415 626690 -2082090 - AluSx SINE Alu -39 273 1 21 0 0 0 chr5_random 626834 626855 -2081925 + AT_rich Low_complexity Low_complexity 1 21 0 324 340 29 24 chr5_random 627642 627848 -2080932 + MIR SINE MIR 52 258 -4 24 53 0 0 chr5_random 628115 628153 -2080627 + AT_rich Low_complexity Low_complexity 1 38 0 546 271 27 13 chr5_random 628427 628652 -2080128 + L1ME2 LINE L1 2166 2393 -4003 1387 174 14 29 chr5_random 628653 628934 -2079846 + AluJo SINE Alu 1 277 -35 324 0 0 0 chr5_random 628938 628974 -2079806 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 298 305 0 0 chr5_random 629015 629120 -2079660 + L1ME2 LINE L1 2374 2478 -3737 24 0 0 0 chr5_random 629162 629186 -2079594 + AT_rich Low_complexity Low_complexity 1 24 0 2712 135 8 23 chr5_random 629193 629666 -2079114 - L1PB2 LINE L1 -3 6148 5683 339 269 0 0 chr5_random 629703 629796 -2078984 + L1ME2 LINE L1 2520 2612 -3603 2093 237 35 68 chr5_random 629857 630078 -2078702 + L1ME2 LINE L1 5384 5611 -622 527 0 16 0 chr5_random 630078 630141 -2078639 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 2093 237 35 68 chr5_random 630141 630688 -2078092 + L1ME2 LINE L1 5611 6127 -106 27 0 0 0 chr5_random 631043 631070 -2077710 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr5_random 631980 632010 -2076770 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr5_random 632565 632597 -2076183 + AT_rich Low_complexity Low_complexity 1 32 0 516 237 0 0 chr5_random 633316 633413 -2075367 + MER63A DNA MER1_type 77 173 -37 304 123 46 39 chr5_random 634190 634320 -2074460 + (TTATA)n Simple_repeat Simple_repeat 1 131 0 240 149 0 0 chr5_random 634410 634457 -2074323 + (TA)n Simple_repeat Simple_repeat 2 48 0 2175 100 17 0 chr5_random 634652 634943 -2073837 - AluSg SINE Alu -14 296 1 2376 68 0 0 chr5_random 636748 637041 -2071739 + AluY SINE Alu 1 293 -18 189 333 70 23 chr5_random 640510 640639 -2068141 + MIR SINE MIR 84 218 -44 2020 128 40 0 chr5_random 640927 641223 -2067557 - AluSg1 SINE Alu -1 308 1 204 40 0 0 chr5_random 642085 642110 -2066670 + (CA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr5_random 642531 642552 -2066228 + AT_rich Low_complexity Low_complexity 1 21 0 240 35 0 0 chr5_random 643854 643883 -2064897 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 441 314 34 92 chr5_random 643907 644232 -2064548 - L2 LINE L2 -20 3293 2988 193 116 23 23 chr5_random 644307 644350 -2064430 + CT-rich Low_complexity Low_complexity 4 46 0 568 292 34 34 chr5_random 644513 644722 -2064058 - L2 LINE L2 -619 2695 2487 228 323 32 0 chr5_random 644742 644835 -2063945 + MER34 LTR ERV1 1 96 -446 2138 189 35 31 chr5_random 644842 644991 -2063789 + LTR29 LTR ERV1 137 284 -338 1381 188 42 39 chr5_random 644991 645299 -2063481 + AluJb SINE Alu 3 311 -1 2138 189 35 31 chr5_random 645299 645631 -2063149 + LTR29 LTR ERV1 284 620 -2 552 329 59 52 chr5_random 645636 645922 -2062858 - L2 LINE L2 -872 2442 2155 1843 145 7 7 chr5_random 646008 646298 -2062482 + AluSx SINE Alu 1 290 -22 1581 187 67 156 chr5_random 646469 647082 -2061698 + LTR8A LTR ERV1 1 540 -187 3392 82 19 4 chr5_random 647082 647559 -2061221 + LTR19A LTR ERV1 3 486 0 1581 187 67 156 chr5_random 647559 647677 -2061103 + LTR8A LTR ERV1 540 667 -60 207 0 0 0 chr5_random 647677 647700 -2061080 + (T)n Simple_repeat Simple_repeat 1 23 0 2327 128 57 25 chr5_random 647866 648302 -2060478 - LTR7 LTR ERV1 0 450 1 414 324 147 23 chr5_random 648453 648712 -2060068 - HAL1 LINE L1 -1071 1436 1146 2744 178 95 43 chr5_random 648771 649305 -2059475 - LTR48 LTR ERV1 0 787 202 2210 102 3 0 chr5_random 649305 649610 -2059170 - AluSg SINE Alu -4 306 1 2744 178 95 43 chr5_random 649610 649821 -2058959 - LTR48 LTR ERV1 -585 202 3 1418 217 49 61 chr5_random 649927 650453 -2058327 - LTR48-int LTR ERV1 -158 6173 5654 253 171 300 0 chr5_random 650471 650541 -2058239 - LTR37A LTR ERV1 -332 94 4 616 200 72 6 chr5_random 650541 650721 -2058059 - LTR48-int LTR ERV1 -771 5560 5369 721 192 0 0 chr5_random 650759 650884 -2057896 - AluSq/x SINE Alu -187 125 1 903 218 58 46 chr5_random 650884 651145 -2057635 - LTR48-int LTR ERV1 -947 5384 5121 24 0 0 0 chr5_random 651673 651697 -2057083 + AT_rich Low_complexity Low_complexity 1 24 0 269 193 133 12 chr5_random 651816 651899 -2056881 - L1MC5 LINE L1 -348 7613 7521 235 250 14 71 chr5_random 651982 652122 -2056658 - L1MC5 LINE L1 -465 7496 7365 592 247 99 69 chr5_random 652179 652511 -2056269 - L1MC5 LINE L1 -727 7234 6893 35 88 0 0 chr5_random 652578 652669 -2056111 + AT_rich Low_complexity Low_complexity 1 91 0 3650 172 30 2 chr5_random 652669 653310 -2055470 - MSTA-int LTR MaLR -992 659 1 1442 153 105 16 chr5_random 653311 653611 -2055169 - MSTA LTR MaLR -83 349 1 255 302 101 49 chr5_random 653896 654482 -2054298 + L1MC/D LINE L1 2894 3525 -2621 297 89 0 0 chr5_random 654482 654527 -2054253 + (CA)n Simple_repeat Simple_repeat 1 45 0 255 302 101 49 chr5_random 654527 654652 -2054128 + L1MC/D LINE L1 3525 3642 -2504 387 0 0 0 chr5_random 655884 655927 -2052853 + (TG)n Simple_repeat Simple_repeat 1 43 0 492 254 58 0 chr5_random 656125 656263 -2052517 - LTR16A LTR ERVL -77 373 228 357 328 16 0 chr5_random 656522 656644 -2052136 + L1MC/D LINE L1 4817 4940 -1206 443 287 7 0 chr5_random 656683 656833 -2051947 + L1MC/D LINE L1 5655 5805 -2003 241 182 0 0 chr5_random 656872 656916 -2051864 - Alu SINE Alu -258 44 1 23 54 0 0 chr5_random 657166 657203 -2051577 + AT_rich Low_complexity Low_complexity 1 37 0 1698 180 3 3 chr5_random 657286 657586 -2051194 + AluJb SINE Alu 1 300 -12 458 252 145 51 chr5_random 657705 657939 -2050841 - MIR SINE MIR 0 262 7 421 358 65 7 chr5_random 657974 658284 -2050496 + L1ME4a LINE L1 4613 4940 -1206 195 290 32 0 chr5_random 659031 659093 -2049687 - L3 LINE CR1 -1101 476 413 23 0 0 0 chr5_random 659944 659967 -2048813 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5_random 660250 660271 -2048509 + AT_rich Low_complexity Low_complexity 1 21 0 1936 142 3 3 chr5_random 660513 660808 -2047972 - AluJb SINE Alu -17 295 1 23 33 0 0 chr5_random 660966 660996 -2047784 + AT_rich Low_complexity Low_complexity 1 30 0 237 65 0 0 chr5_random 661033 661064 -2047716 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 413 353 73 7 chr5_random 661828 662114 -2046666 + L1ME4a LINE L1 5658 5962 -159 1826 183 9 3 chr5_random 662262 662601 -2046179 - MER47A DNA MER2_type -1 365 25 216 0 0 0 chr5_random 664107 664131 -2044649 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 751 233 37 11 chr5_random 664367 664556 -2044224 - MIR SINE MIR -68 194 1 301 269 42 50 chr5_random 664598 664717 -2044063 + MIR SINE MIR 37 154 -108 387 41 0 0 chr5_random 664879 664928 -2043852 + (TC)n Simple_repeat Simple_repeat 2 50 0 1451 184 77 0 chr5_random 664934 665195 -2043585 - AluJb SINE Alu -31 281 1 369 0 0 0 chr5_random 666286 666327 -2042453 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 1992 127 3 22 chr5_random 667743 668058 -2040722 - AluSx SINE Alu -3 309 1 368 234 81 8 chr5_random 668784 668908 -2039872 + MER58B DNA MER1_type 27 159 -182 580 218 131 10 chr5_random 668911 669117 -2039663 - L1M4 LINE L1 -1293 4853 4623 2076 131 0 0 chr5_random 669306 669603 -2039177 - AluSx SINE Alu -15 297 1 22 0 0 0 chr5_random 670149 670171 -2038609 + AT_rich Low_complexity Low_complexity 1 22 0 245 297 35 57 chr5_random 671655 671884 -2036896 - L1M4 LINE L1 -1546 4600 4377 22 0 0 0 chr5_random 672083 672105 -2036675 + AT_rich Low_complexity Low_complexity 1 22 0 229 289 29 10 chr5_random 672158 672262 -2036518 - L1M4 LINE L1 -2098 4048 3943 843 222 28 0 chr5_random 672613 672789 -2035991 - MER58B DNA MER1_type 0 341 161 5605 227 84 42 chr5_random 672789 673531 -2035249 + L1M4 LINE L1 2488 3197 -2949 1949 111 17 14 chr5_random 673531 673820 -2034960 + AluSx SINE Alu 1 290 -22 5605 227 84 42 chr5_random 673820 674828 -2033952 + L1M4 LINE L1 3197 4347 -1799 300 102 0 0 chr5_random 674828 674877 -2033903 + (CA)n Simple_repeat Simple_repeat 2 50 0 5605 227 84 42 chr5_random 674877 675258 -2033522 + L1M4 LINE L1 4347 4710 -1436 29 47 0 0 chr5_random 675513 675556 -2033224 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr5_random 675604 675647 -2033133 + AT_rich Low_complexity Low_complexity 1 43 0 36 23 0 0 chr5_random 675985 676028 -2032752 + AT_rich Low_complexity Low_complexity 1 43 0 2209 79 0 7 chr5_random 678698 678977 -2029803 + AluY SINE Alu 1 277 -34 351 0 0 0 chr5_random 678977 679016 -2029764 + (TC)n Simple_repeat Simple_repeat 2 40 0 518 183 9 0 chr5_random 679016 679131 -2029649 + (TA)n Simple_repeat Simple_repeat 2 117 0 181 140 0 40 chr5_random 679139 679189 -2029591 + (TCTCCC)n Simple_repeat Simple_repeat 6 53 0 486 0 0 0 chr5_random 681165 681219 -2027561 + (TA)n Simple_repeat Simple_repeat 1 54 0 2686 44 0 12 chr5_random 681219 681557 -2027223 - L1PA4 LINE L1 -19 6136 5803 3311 125 8 8 chr5_random 681635 682148 -2026632 - MER75 DNA T2_type 0 514 2 246 301 41 0 chr5_random 682152 682225 -2026555 - L2 LINE L2 -8 3264 3189 243 125 0 0 chr5_random 682322 682362 -2026418 + (A)n Simple_repeat Simple_repeat 1 40 0 849 212 0 0 chr5_random 682859 683010 -2025770 - MER58A DNA MER1_type 0 152 2 296 331 94 31 chr5_random 683464 683718 -2025062 - MLT1J LTR MaLR 0 511 242 258 220 231 0 chr5_random 685101 685192 -2023588 - L1MD3 LINE L1 -18 7977 7866 3677 166 33 6 chr5_random 685202 685864 -2022916 + Tigger1 DNA MER2_type 26 705 -1713 2285 169 47 32 chr5_random 685864 686336 -2022444 - MER66B LTR ERV1 0 486 8 3226 143 2 42 chr5_random 686343 686894 -2021886 - MER66B-int LTR ERV1 0 6676 6148 1869 138 70 62 chr5_random 686901 687257 -2021523 + THE1B LTR MaLR 6 364 0 10927 117 16 0 chr5_random 687285 688828 -2019952 + THE1B-int LTR MaLR 13 1580 0 2162 132 48 25 chr5_random 688828 689184 -2019596 + THE1B LTR MaLR 1 364 0 546 300 80 0 chr5_random 689386 689536 -2019244 - MER66B-int LTR ERV1 -3574 3102 2941 1648 203 86 17 chr5_random 689614 690380 -2018400 - MER66B-int LTR ERV1 -5586 1090 197 1688 152 181 11 chr5_random 690680 691028 -2017752 - MSTA LTR MaLR -21 407 1 2288 184 26 42 chr5_random 691038 691532 -2017248 - MER66B LTR ERV1 0 486 1 10103 137 30 2 chr5_random 691532 692683 -2016097 + Tigger1 DNA MER2_type 702 1916 -502 2431 93 0 3 chr5_random 692683 692995 -2015785 + AluY SINE Alu 1 311 0 10103 137 30 2 chr5_random 692995 693510 -2015270 + Tigger1 DNA MER2_type 1916 2415 -3 3522 235 43 62 chr5_random 693560 693674 -2015106 - L1MC4a LINE L1 -196 7612 7497 1140 158 195 16 chr5_random 693674 693920 -2014860 - AluJb SINE Alu -12 290 1 3522 235 43 62 chr5_random 693920 695057 -2013723 - L1MC4a LINE L1 -311 7497 6385 22 35 0 0 chr5_random 696361 696390 -2012390 + AT_rich Low_complexity Low_complexity 1 29 0 183 283 19 0 chr5_random 696478 696531 -2012249 - L2 LINE L2 -4 3309 3256 24 0 0 0 chr5_random 697027 697051 -2011729 + AT_rich Low_complexity Low_complexity 1 24 0 466 284 121 26 chr5_random 697055 697287 -2011493 - MIR SINE MIR -8 254 1 194 194 16 0 chr5_random 697465 697527 -2011253 + CT-rich Low_complexity Low_complexity 3 65 0 180 179 0 0 chr5_random 697882 697921 -2010859 + (TG)n Simple_repeat Simple_repeat 2 40 0 2161 106 3 3 chr5_random 699646 699928 -2008852 + AluSc SINE Alu 1 282 -27 429 131 28 0 chr5_random 699928 700035 -2008745 + (TA)n Simple_repeat Simple_repeat 1 110 0 741 215 67 5 chr5_random 700356 700565 -2008215 + MER33 DNA MER1_type 3 224 -100 24 0 0 0 chr5_random 700617 700641 -2008139 + AT_rich Low_complexity Low_complexity 1 24 0 8451 198 6 25 chr5_random 700842 702659 -2006121 + L1PA15 LINE L1 3501 5283 -863 2810 156 0 2 chr5_random 702653 703102 -2005678 + L1PA15 LINE L1 5590 6037 -128 * 6144 115 50 10 chr5_random 703109 703329 -2005451 + L1MA2 LINE L1 5255 5465 -839 2183 103 0 3 chr5_random 703329 703621 -2005159 + AluSg SINE Alu 1 291 -19 6144 115 50 10 chr5_random 703621 704409 -2004371 + L1MA2 LINE L1 5465 6304 0 785 125 52 0 chr5_random 704438 704574 -2004206 + L1PA15 LINE L1 6023 6165 0 1747 171 41 38 chr5_random 704840 705209 -2003571 + THE1C LTR MaLR 1 370 -5 1178 226 105 74 chr5_random 706013 706469 -2002311 - LTR1B LTR ERV1 -18 1002 332 739 231 16 11 chr5_random 706495 706677 -2002103 - LTR1 LTR ERV1 -601 184 2 27 49 0 0 chr5_random 707090 707131 -2001649 + AT_rich Low_complexity Low_complexity 1 41 0 408 154 71 12 chr5_random 707131 707300 -2001480 + (TA)n Simple_repeat Simple_repeat 2 180 0 32 26 0 0 chr5_random 707302 707341 -2001439 + AT_rich Low_complexity Low_complexity 1 39 0 27 29 0 0 chr5_random 707948 707982 -2000798 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5_random 708319 708343 -2000437 + AT_rich Low_complexity Low_complexity 1 24 0 388 273 33 16 chr5_random 710027 710148 -1998632 - MER76 LTR ERV -54 634 512 920 263 55 52 chr5_random 710184 710530 -1998250 - MER76 LTR ERV -341 347 1 346 304 38 19 chr5_random 710869 711027 -1997753 + L1MEd LINE L1 12 172 -5947 210 301 0 39 chr5_random 711030 711133 -1997647 + GA-rich Low_complexity Low_complexity 3 101 0 1228 230 45 6 chr5_random 711214 711544 -1997236 - L1MC3 LINE L1 -78 7707 7365 363 326 62 62 chr5_random 711578 712161 -1996619 + L1MEd LINE L1 268 850 -5269 542 244 23 0 chr5_random 712677 712808 -1995972 + LTR52 LTR ERVL 286 419 -2 430 282 84 39 chr5_random 713018 713327 -1995453 + L1ME LINE L1 5316 5638 -532 184 315 55 0 chr5_random 713682 713755 -1995025 + MIR SINE MIR 173 249 -13 627 311 127 0 chr5_random 715554 715782 -1992998 + LTR16B LTR ERVL 3 259 -205 184 379 23 11 chr5_random 716097 716184 -1992596 - L2 LINE L2 -3 3269 3182 351 313 103 45 chr5_random 716560 716958 -1991822 - L1M4 LINE L1 -3185 2961 2511 2183 109 7 0 chr5_random 716958 717251 -1991529 - AluSx SINE Alu -17 295 1 351 313 103 45 chr5_random 717251 717481 -1991299 - L1M4 LINE L1 -3635 2511 2296 648 279 18 51 chr5_random 717483 717891 -1990889 + L1M4 LINE L1 4376 4771 -1375 21 0 0 0 chr5_random 718115 718136 -1990644 + AT_rich Low_complexity Low_complexity 1 21 0 355 277 10 87 chr5_random 718242 718448 -1990332 + L1M4 LINE L1 3841 4030 -2116 708 167 0 0 chr5_random 720728 720842 -1987938 + AluJb SINE Alu 4 117 -195 214 28 28 28 chr5_random 720842 720878 -1987902 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 433 246 20 115 chr5_random 720890 721134 -1987646 - L1MA10 LINE L1 -35 6289 5909 1394 181 148 0 chr5_random 721188 721498 -1987282 + MER47A DNA MER2_type 5 360 -6 504 138 25 12 chr5_random 721524 721604 -1987176 - MSTD LTR MaLR -315 81 1 3775 271 75 35 chr5_random 721613 723605 -1985175 - L1M4 LINE L1 -838 5308 3236 266 200 71 35 chr5_random 723617 723702 -1985078 - MER58C DNA MER1_type -15 200 113 1176 299 75 58 chr5_random 723791 724416 -1984364 + L1PA13 LINE L1 788 1423 -6151 303 337 0 0 chr5_random 724496 724594 -1984186 + L1PA13 LINE L1 2084 2181 -5400 372 317 24 24 chr5_random 724827 724991 -1983789 + L1PA13 LINE L1 2179 2342 -5239 * 12192 192 56 9 chr5_random 724985 730050 -1978730 - L1PA12 LINE L1 -2009 5575 1 1468 253 35 37 chr5_random 730055 730683 -1978097 - L1MEc LINE L1 -4101 2295 1669 504 307 74 0 chr5_random 730684 730847 -1977933 + MER96 DNA MER1_type? 1 175 0 6237 192 30 1 chr5_random 730881 730970 -1977810 - L1ME LINE L1 -546 5575 5490 188 67 33 0 chr5_random 730970 731000 -1977780 + (TTA)n Simple_repeat Simple_repeat 2 32 0 6237 192 30 1 chr5_random 731000 732398 -1976382 - L1ME LINE L1 -631 5490 4060 1771 69 0 0 chr5_random 732400 732632 -1976148 + L1P5 LINE L1 5560 5791 -360 283 244 47 0 chr5_random 732659 732745 -1976035 - L1MC4 LINE L1 -1339 6703 6614 2315 97 3 0 chr5_random 732775 733095 -1975685 + L1PB1 LINE L1 5830 6150 -1 3185 239 75 15 chr5_random 733117 735051 -1973729 - L1MD2 LINE L1 -24 6404 4272 423 0 0 0 chr5_random 735051 735098 -1973682 + (TG)n Simple_repeat Simple_repeat 2 48 0 3185 239 75 15 chr5_random 735098 735437 -1973343 - L1MD2 LINE L1 -2156 4272 3955 483 239 0 18 chr5_random 735458 735571 -1973209 - L1MA10 LINE L1 0 6334 6224 2274 280 103 41 chr5_random 735579 737268 -1971512 - L1MD2 LINE L1 -2268 3947 54 21 0 0 0 chr5_random 737618 737639 -1971141 + AT_rich Low_complexity Low_complexity 1 21 0 293 261 60 15 chr5_random 737650 737784 -1970996 + L1ME4a LINE L1 5582 5721 -400 243 304 56 8 chr5_random 737985 738110 -1970670 + L1ME4a LINE L1 5986 6116 -5 24 0 0 0 chr5_random 738163 738187 -1970593 + AT_rich Low_complexity Low_complexity 1 24 0 402 211 0 0 chr5_random 738523 738627 -1970153 + (TA)n Simple_repeat Simple_repeat 1 104 0 1644 188 5 50 chr5_random 738645 739005 -1969775 - MLT2C1 LTR ERVL -48 416 8 1524 247 43 45 chr5_random 739340 739609 -1969171 - MLT1D LTR MaLR -12 493 224 1620 157 67 27 chr5_random 739609 739909 -1968871 - AluJb SINE Alu 0 312 1 1524 247 43 45 chr5_random 739909 740129 -1968651 - MLT1D LTR MaLR -281 224 5 274 291 153 74 chr5_random 740283 740551 -1968229 + HAL1 LINE L1 553 798 -1709 759 169 28 0 chr5_random 740551 740693 -1968087 + L1MC1 LINE L1 6176 6321 -12 274 291 153 74 chr5_random 740693 741194 -1967586 + HAL1 LINE L1 798 1383 -1124 4709 182 25 39 chr5_random 741752 743097 -1965683 - L1MA7 LINE L1 0 7710 6372 693 108 20 0 chr5_random 743097 743199 -1965581 + L1PA7 LINE L1 6051 6154 0 1793 147 65 0 chr5_random 743217 743510 -1965270 + AluJo SINE Alu 1 312 0 1242 160 24 40 chr5_random 743590 743840 -1964940 - MLT1D LTR MaLR -1 504 259 272 163 0 0 chr5_random 743850 743893 -1964887 - L1MA7 LINE L1 -1183 6382 6340 242 0 61 0 chr5_random 743901 743934 -1964846 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 612 151 142 0 chr5_random 743938 744044 -1964736 - FLAM_C SINE Alu -20 123 3 8063 183 14 30 chr5_random 744052 744228 -1964552 - L1MA7 LINE L1 -1232 6333 6156 4630 183 16 16 chr5_random 744228 745093 -1963687 - MER6 DNA MER2_type 0 865 1 8063 183 14 30 chr5_random 745093 746636 -1962144 - L1MA7 LINE L1 -1409 6156 4640 4010 260 67 16 chr5_random 746638 748635 -1960145 - L1MA7 LINE L1 -3529 4036 2008 3882 128 12 0 chr5_random 748649 749244 -1959536 - LTR43 LTR ERV1 0 602 1 1541 244 25 6 chr5_random 749276 749640 -1959140 - L1MA7 LINE L1 -6637 852 482 2200 118 17 20 chr5_random 751414 751770 -1957010 + THE1A LTR MaLR 1 355 0 11066 108 8 1 chr5_random 751770 753339 -1955441 + THE1A-int LTR MaLR 1 1580 0 2095 143 6 14 chr5_random 753339 753496 -1955284 + THE1A LTR MaLR 1 158 -197 2125 105 7 3 chr5_random 753496 753801 -1954979 - AluSg SINE Alu -4 306 1 2095 143 6 14 chr5_random 753801 754001 -1954779 + THE1A LTR MaLR 158 355 0 765 229 45 0 chr5_random 754066 754223 -1954557 + FRAM SINE Alu 1 164 -2 21 0 0 0 chr5_random 755408 755429 -1953351 + AT_rich Low_complexity Low_complexity 1 21 0 234 300 25 0 chr5_random 755440 755520 -1953260 + CT-rich Low_complexity Low_complexity 4 85 0 25 0 0 0 chr5_random 755568 755593 -1953187 + AT_rich Low_complexity Low_complexity 1 25 0 1617 181 3 17 chr5_random 755886 756179 -1952601 + AluJb SINE Alu 1 289 -23 261 0 0 0 chr5_random 756185 756214 -1952566 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 186 133 0 0 chr5_random 756711 756741 -1952039 + (TA)n Simple_repeat Simple_repeat 1 30 0 663 233 121 88 chr5_random 757016 757569 -1951211 - MER34B LTR ERV1 -4 538 1 2146 125 0 3 chr5_random 757646 757949 -1950831 + AluSx SINE Alu 1 302 -10 450 211 65 24 chr5_random 758290 758413 -1950367 - MER69 DNA AcHobo -1 2525 2398 2368 77 0 3 chr5_random 758620 758917 -1949863 + AluY SINE Alu 1 296 -15 23 54 0 0 chr5_random 759548 759585 -1949195 + AT_rich Low_complexity Low_complexity 1 37 0 33 56 0 0 chr5_random 759824 759878 -1948902 + AT_rich Low_complexity Low_complexity 1 54 0 1606 174 21 17 chr5_random 766253 766541 -1942239 - AluJo SINE Alu -18 294 6 421 247 85 54 chr5_random 766577 766836 -1941944 - L1M4 LINE L1 -3134 3012 2746 298 103 0 35 chr5_random 767188 767246 -1941534 + (TA)n Simple_repeat Simple_repeat 2 57 0 1171 90 0 114 chr5_random 767262 767463 -1941317 + AluSc SINE Alu 1 178 -131 21 36 0 0 chr5_random 768077 768105 -1940675 + AT_rich Low_complexity Low_complexity 1 28 0 1464 150 17 21 chr5_random 768118 768405 -1940375 - L1MA4 LINE L1 0 6300 6015 520 222 215 0 chr5_random 770229 770373 -1938407 - MER5A DNA MER1_type -1 188 14 771 236 38 80 chr5_random 771348 771687 -1937093 - L1ME1 LINE L1 -8 6158 5834 21 57 0 0 chr5_random 772402 772437 -1936343 + AT_rich Low_complexity Low_complexity 1 35 0 208 191 24 0 chr5_random 772780 772822 -1935958 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 229 284 80 11 chr5_random 773065 773153 -1935627 + MER91C DNA MER1_type 47 140 0 346 339 203 6 chr5_random 774421 774598 -1934182 - MIR SINE MIR -16 246 35 31 44 0 0 chr5_random 774672 774717 -1934063 + AT_rich Low_complexity Low_complexity 1 45 0 367 297 31 8 chr5_random 774918 775046 -1933734 - MIR SINE MIR -3 259 129 224 222 42 0 chr5_random 775122 775194 -1933586 - MIR SINE MIR -42 220 146 420 279 91 41 chr5_random 775785 775982 -1932798 - MIR SINE MIR -48 214 8 360 308 19 9 chr5_random 776289 776396 -1932384 - MIR SINE MIR -64 144 37 604 187 115 44 chr5_random 776408 776590 -1932190 - MER113 DNA MER1_type? 0 521 327 290 217 0 48 chr5_random 776933 777016 -1931764 - L1ME LINE L1 -298 5872 5794 327 278 119 37 chr5_random 777202 777497 -1931283 - L1ME LINE L1 -589 5575 5257 214 288 0 0 chr5_random 777788 777847 -1930933 + (TTTA)n Simple_repeat Simple_repeat 1 59 0 360 325 80 0 chr5_random 777979 778142 -1930638 - L1ME LINE L1 -2155 3991 3816 2225 163 53 5 chr5_random 778143 778194 -1930586 + L1PA16 LINE L1 5730 5777 -389 414 0 0 0 chr5_random 778194 778240 -1930540 + (TA)n Simple_repeat Simple_repeat 1 46 0 2225 163 53 5 chr5_random 778240 778605 -1930175 + L1PA16 LINE L1 5777 6166 0 25 0 0 0 chr5_random 778621 778646 -1930134 + AT_rich Low_complexity Low_complexity 1 25 0 587 237 53 7 chr5_random 778695 778847 -1929933 - LTR40b LTR ERVL 0 462 304 853 277 33 5 chr5_random 778875 779166 -1929614 - HERVL40 LTR ERVL -9 5521 2829 260 228 70 0 chr5_random 779268 779325 -1929455 - HERVL40 LTR ERVL -254 2783 2723 3359 293 69 58 chr5_random 779557 780881 -1927899 - HERVL40 LTR ERVL -2541 2989 1645 1346 82 10 58 chr5_random 780881 781087 -1927693 - MER107 DNA MER1_type 0 197 2 3359 293 69 58 chr5_random 781087 781206 -1927574 - HERVL40 LTR ERVL -3885 1645 1529 8809 109 11 14 chr5_random 781216 782779 -1926001 + L1MA1 LINE L1 2053 3603 -3962 2804 226 8 2 chr5_random 782786 783427 -1925353 + L1MA1 LINE L1 3798 4442 -3123 * 10276 153 14 3 chr5_random 783426 786305 -1922475 + L1MA1 LINE L1 4809 7717 -4 41 21 0 0 chr5_random 786305 786353 -1922427 + AT_rich Low_complexity Low_complexity 1 48 0 1818 124 21 25 chr5_random 786519 786835 -1921945 - AluSx SINE Alu 0 315 1 26 30 0 0 chr5_random 787698 787731 -1921049 + AT_rich Low_complexity Low_complexity 1 33 0 778 187 0 0 chr5_random 787731 787865 -1920915 - AluJo SINE Alu -178 134 1 33 0 0 0 chr5_random 788624 788657 -1920123 + AT_rich Low_complexity Low_complexity 1 33 0 665 186 132 74 chr5_random 789181 789227 -1919553 - MER33 DNA MER1_type -2312 273 231 1862 114 33 0 chr5_random 789227 789539 -1919241 - AluSx SINE Alu 0 321 1 665 186 132 74 chr5_random 789539 789749 -1919031 - MER33 DNA MER1_type -2354 231 1 1398 185 70 27 chr5_random 790153 790451 -1918329 + AluJo SINE Alu 1 311 -1 238 266 16 16 chr5_random 791163 791227 -1917553 - tRNA-Ile-ATT tRNA tRNA -3 74 11 22 70 0 0 chr5_random 791722 791765 -1917015 + AT_rich Low_complexity Low_complexity 1 43 0 297 207 0 161 chr5_random 791897 791984 -1916796 - MER2 DNA MER2_type -5 340 268 1387 182 7 7 chr5_random 792007 792293 -1916487 + AluY SINE Alu 1 286 -25 190 0 0 62 chr5_random 792293 792325 -1916455 + (CAAAC)n Simple_repeat Simple_repeat 2 31 0 2212 66 0 0 chr5_random 792441 792715 -1916065 + AluY SINE Alu 1 274 -37 220 26 0 51 chr5_random 792719 792758 -1916022 + (CAAAA)n Simple_repeat Simple_repeat 1 37 0 1039 146 68 48 chr5_random 792776 792982 -1915798 - MER2 DNA MER2_type -135 210 1 4728 254 92 61 chr5_random 793698 795944 -1912836 - L1M LINE L1 -747 5399 3224 534 180 9 9 chr5_random 795944 796055 -1912725 - L1PB4 LINE L1 -2 6154 6044 1681 130 6 118 chr5_random 796061 796407 -1912373 - AluSg SINE Alu -3 307 1 4728 254 92 61 chr5_random 796407 797207 -1911573 - L1M LINE L1 -2926 3220 2272 471 284 48 57 chr5_random 797301 797635 -1911145 - L1M4 LINE L1 -1310 4836 4506 267 54 0 0 chr5_random 797647 797684 -1911096 + (TC)n Simple_repeat Simple_repeat 2 38 0 264 260 29 0 chr5_random 797684 797788 -1910992 + (TA)n Simple_repeat Simple_repeat 2 108 0 514 273 86 43 chr5_random 797789 798093 -1910687 - L1M4 LINE L1 -1642 4504 4188 11425 217 32 36 chr5_random 798106 800739 -1908041 - L1 LINE L1 -938 5910 3269 1819 154 0 11 chr5_random 800739 801044 -1907736 - AluSx SINE Alu 0 302 1 11425 217 32 36 chr5_random 801044 801286 -1907494 - L1 LINE L1 -3579 3269 3028 2136 85 3 37 chr5_random 801286 801624 -1907156 + AluSx SINE Alu 1 328 0 11425 217 32 36 chr5_random 801624 802110 -1906670 - L1 LINE L1 -3820 3028 2559 1928 213 40 7 chr5_random 802111 802566 -1906214 - L1 LINE L1 -4452 2397 1928 455 303 184 16 chr5_random 852649 853152 -1855628 - LTR50 LTR ERVL -18 777 87 2189 134 8 49 chr5_random 853152 853541 -1855239 + L1PA15 LINE L1 5793 6165 0 1650 152 68 73 chr5_random 853560 853928 -1854852 + L1PA16 LINE L1 5792 6157 -9 321 233 78 0 chr5_random 853937 854027 -1854753 - LTR50 LTR ERVL -693 102 6 216 0 0 0 chr5_random 854167 854191 -1854589 + (TA)n Simple_repeat Simple_repeat 1 24 0 382 233 78 32 chr5_random 854192 854441 -1854339 + Charlie2a DNA MER1_type 1473 1709 -1153 324 0 0 0 chr5_random 854441 854477 -1854303 + (CA)n Simple_repeat Simple_repeat 1 36 0 382 233 78 32 chr5_random 854477 854545 -1854235 + Charlie2a DNA MER1_type 1709 2142 -720 313 241 46 0 chr5_random 854590 854677 -1854103 + MLT2C1 LTR ERVL 3 93 -304 6544 154 11 1 chr5_random 854690 856488 -1852292 - L1MA2 LINE L1 0 6304 4489 682 272 42 50 chr5_random 856488 856807 -1851973 + MLT2C1 LTR ERVL 77 657 -6 225 203 17 34 chr5_random 856816 856875 -1851905 + Charlie2a DNA MER1_type 2167 2224 -638 22 0 0 0 chr5_random 856960 856982 -1851798 + AT_rich Low_complexity Low_complexity 1 22 0 7278 169 92 26 chr5_random 856982 858561 -1850219 - MER52A LTR ERV1 0 1755 1 303 181 28 0 chr5_random 858600 858672 -1850108 + Charlie2a DNA MER1_type 2398 2471 -391 27 29 0 0 chr5_random 858672 858706 -1850074 + AT_rich Low_complexity Low_complexity 1 34 0 365 244 72 48 chr5_random 858712 858921 -1849859 + Charlie2a DNA MER1_type 2630 2843 -19 21 89 0 0 chr5_random 859387 859443 -1849337 + AT_rich Low_complexity Low_complexity 1 56 0 24 0 0 0 chr5_random 859693 859717 -1849063 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr5_random 859975 860015 -1848765 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr5_random 860091 860116 -1848664 + AT_rich Low_complexity Low_complexity 1 25 0 274 59 0 0 chr5_random 860511 860545 -1848235 + Alu SINE Alu 7 40 -261 2090 131 0 0 chr5_random 860545 860843 -1847937 + AluSx SINE Alu 4 301 -11 234 0 0 0 chr5_random 860843 860869 -1847911 + (TA)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr5_random 861137 861161 -1847619 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2025 199 33 44 chr5_random 861512 861809 -1846971 + MLT1C LTR MaLR 15 307 -160 2025 116 0 38 chr5_random 861809 862129 -1846651 + AluSx SINE Alu 1 308 -4 2025 199 33 44 chr5_random 862129 862289 -1846491 + MLT1C LTR MaLR 307 467 0 21 71 0 0 chr5_random 863262 863304 -1845476 + AT_rich Low_complexity Low_complexity 1 42 0 180 77 0 0 chr5_random 864998 865024 -1843756 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 205 302 75 0 chr5_random 865029 865082 -1843698 - L2 LINE L2 -9 3263 3207 25 31 0 0 chr5_random 865892 865924 -1842856 + AT_rich Low_complexity Low_complexity 1 32 0 1809 135 115 12 chr5_random 866271 866611 -1842169 + THE1C LTR MaLR 1 375 0 206 241 0 0 chr5_random 867040 867094 -1841686 + T-rich Low_complexity Low_complexity 1 54 0 3517 245 100 28 chr5_random 867757 869049 -1839731 - L1MC4 LINE L1 -4 8038 6654 23 0 0 0 chr5_random 869057 869080 -1839700 + AT_rich Low_complexity Low_complexity 1 23 0 1384 158 121 11 chr5_random 869080 869345 -1839435 - AluSg1 SINE Alu -14 295 2 1630 317 71 34 chr5_random 869403 870113 -1838667 + L1M4 LINE L1 3438 4219 -1927 396 103 0 0 chr5_random 870113 870171 -1838609 + (TG)n Simple_repeat Simple_repeat 1 58 0 1630 317 71 34 chr5_random 870171 870771 -1838009 + L1M4 LINE L1 4219 4796 -1350 1735 181 20 57 chr5_random 870935 871338 -1837442 + MLT1B LTR MaLR 3 390 0 254 157 20 0 chr5_random 871475 871526 -1837254 + L1M4 LINE L1 4501 4552 -1594 366 306 5 86 chr5_random 872087 872273 -1836507 - MIR SINE MIR -43 219 49 6081 16 0 0 chr5_random 872277 872970 -1835810 + L1PA3 LINE L1 5463 6155 0 310 322 34 27 chr5_random 873716 873732 -1835048 - L2 LINE L2 -4 3309 3295 222 37 0 0 chr5_random 873732 873759 -1835021 + (TATG)n Simple_repeat Simple_repeat 2 28 0 310 322 34 27 chr5_random 873759 873888 -1834892 - L2 LINE L2 -18 3295 3163 318 143 18 0 chr5_random 873973 874029 -1834751 + LTR40a LTR ERVL 95 151 -368 652 210 61 102 chr5_random 874176 874457 -1834323 + LTR40b LTR ERVL 118 384 -78 216 86 0 0 chr5_random 874457 874492 -1834288 + (TG)n Simple_repeat Simple_repeat 2 36 0 652 210 61 102 chr5_random 874492 874553 -1834227 + LTR40b LTR ERVL 384 446 -16 1725 148 20 23 chr5_random 874554 874858 -1833922 + AluSx SINE Alu 1 303 -9 275 309 257 26 chr5_random 875102 875678 -1833102 - L2 LINE L2 -823 2491 1783 207 317 100 8 chr5_random 875912 876032 -1832748 + MIR SINE MIR 57 187 -75 23 0 0 0 chr5_random 876212 876235 -1832545 + AT_rich Low_complexity Low_complexity 1 23 0 2420 70 0 0 chr5_random 876267 876567 -1832213 + AluY SINE Alu 1 300 -11 547 151 19 137 chr5_random 877979 878184 -1830596 - MER53 DNA DNA 0 189 9 609 213 22 0 chr5_random 878294 878430 -1830350 - L1MA9 LINE L1 -31 6281 6143 1051 239 7 22 chr5_random 878435 878707 -1830073 - MSTD-int LTR MaLR -1466 269 2 1274 216 147 6 chr5_random 878709 879056 -1829724 - MSTD LTR MaLR 0 396 1 377 313 123 12 chr5_random 880666 880829 -1827951 - MIR3 SINE MIR -5 203 23 30 0 0 0 chr5_random 881357 881387 -1827393 + AT_rich Low_complexity Low_complexity 1 30 0 27 81 0 0 chr5_random 881626 881688 -1827092 + AT_rich Low_complexity Low_complexity 1 62 0 251 304 9 18 chr5_random 881899 882011 -1826769 + HAL1 LINE L1 2252 2362 -145 21 0 0 0 chr5_random 882137 882158 -1826622 + AT_rich Low_complexity Low_complexity 1 21 0 522 263 114 0 chr5_random 883453 883628 -1825152 - Charlie8 DNA MER1_type -2186 231 37 28 61 0 0 chr5_random 883730 883779 -1825001 + AT_rich Low_complexity Low_complexity 1 49 0 247 160 60 20 chr5_random 885619 885719 -1823061 + (TA)n Simple_repeat Simple_repeat 1 104 0 303 364 14 14 chr5_random 885801 885941 -1822839 + MER5A DNA MER1_type 7 146 -43 24 0 0 0 chr5_random 885976 886000 -1822780 + AT_rich Low_complexity Low_complexity 1 24 0 13051 182 46 18 chr5_random 886005 891134 -1817646 - L1MA4 LINE L1 -1 7718 2418 6713 76 5 0 chr5_random 891154 892097 -1816683 - L1PA7 LINE L1 -3 6151 5206 2408 211 24 9 chr5_random 892097 892549 -1816231 - L1MA4 LINE L1 -5594 1971 1510 395 270 73 0 chr5_random 893152 893289 -1815491 + L1ME1 LINE L1 17 163 -6260 638 236 48 15 chr5_random 893327 893607 -1815173 - MER93b LTR ERV1 0 373 56 2631 204 32 64 chr5_random 893644 894488 -1814292 + L1PBa LINE L1 2078 2894 -3969 2390 229 30 5 chr5_random 894504 895102 -1813678 + L1 LINE L1 3060 3672 -3190 14053 37 5 5 chr5_random 895105 896854 -1811926 - L1P LINE L1 -1146 5000 3251 389 88 0 0 chr5_random 896853 896910 -1811870 + L1P LINE L1 3199 3255 -2891 * 11914 46 1 1 chr5_random 897302 898819 -1809961 - L1P LINE L1 -2874 3272 1755 1267 210 102 45 chr5_random 898819 898910 -1809870 + L1 LINE L1 3667 3751 -3111 1194 220 27 37 chr5_random 898910 899210 -1809570 + AluJo SINE Alu 3 299 -3 1267 210 102 45 chr5_random 899210 899561 -1809219 + L1 LINE L1 3751 4134 -2728 366 317 24 0 chr5_random 899581 899704 -1809076 + L1ME1 LINE L1 208 333 -6090 369 221 26 0 chr5_random 899705 899782 -1808998 - MER20 DNA MER1_type 0 219 141 1176 151 159 63 chr5_random 899841 900112 -1808668 + AluJb SINE Alu 1 297 -5 3255 272 102 28 chr5_random 900177 901992 -1806788 + L1ME1 LINE L1 3858 5974 -987 2387 30 44 0 chr5_random 901992 902287 -1806493 + AluY SINE Alu 1 308 -3 3255 272 102 28 chr5_random 902287 903348 -1805432 + L1ME1 LINE L1 5974 6955 -6 222 62 0 0 chr5_random 903598 903630 -1805150 + (TA)n Simple_repeat Simple_repeat 1 32 0 2121 191 54 30 chr5_random 904138 904599 -1804181 - MER70A LTR ERVL 0 472 1 224 170 0 21 chr5_random 905793 905840 -1802940 + T-rich Low_complexity Low_complexity 2 47 0 2194 62 27 27 chr5_random 906094 906386 -1802394 - AluY SINE Alu -15 296 5 227 262 48 12 chr5_random 907830 907914 -1800866 - L1MC4 LINE L1 -1347 6695 6609 650 132 35 11 chr5_random 907914 908175 -1800605 + (TA)n Simple_repeat Simple_repeat 1 267 0 35 41 0 0 chr5_random 908181 908230 -1800550 + AT_rich Low_complexity Low_complexity 1 49 0 651 80 21 59 chr5_random 908230 908417 -1800363 + (TA)n Simple_repeat Simple_repeat 1 180 0 309 88 29 15 chr5_random 908431 908499 -1800281 + (TA)n Simple_repeat Simple_repeat 2 70 0 261 78 52 26 chr5_random 908542 908619 -1800161 + (TA)n Simple_repeat Simple_repeat 1 79 0 21 36 0 0 chr5_random 908694 908722 -1800058 + AT_rich Low_complexity Low_complexity 1 28 0 532 224 31 19 chr5_random 909917 910052 -1798728 + MIR SINE MIR 103 238 -24 13661 187 16 14 chr5_random 910204 911939 -1796841 - L1PB1 LINE L1 -5 6862 5133 243 0 0 0 chr5_random 911939 911966 -1796814 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 13661 187 16 14 chr5_random 911966 914393 -1794387 - L1PB1 LINE L1 -1734 5133 2627 8538 159 21 2 chr5_random 914391 915858 -1792922 - L1PB1 LINE L1 -5368 1495 1 * 27 73 0 0 chr5_random 916269 916324 -1792456 + AT_rich Low_complexity Low_complexity 1 55 0 23 0 0 0 chr5_random 916473 916496 -1792284 + AT_rich Low_complexity Low_complexity 1 23 0 27 73 0 0 chr5_random 916886 916941 -1791839 + AT_rich Low_complexity Low_complexity 1 55 0 255 235 12 82 chr5_random 917010 917095 -1791685 + L2 LINE L2 3193 3271 -1 1098 163 0 0 chr5_random 917201 917379 -1791401 - L1PA7 LINE L1 -4021 2125 1948 * 21704 90 11 8 chr5_random 917370 921379 -1787401 + L1PA7 LINE L1 2136 6153 -1 234 114 0 0 chr5_random 922980 923015 -1785765 - U2 snRNA snRNA -142 46 12 25 0 0 0 chr5_random 923015 923040 -1785740 + AT_rich Low_complexity Low_complexity 1 25 0 2177 94 39 0 chr5_random 923072 923358 -1785422 - AluSc SINE Alu -10 299 3 520 243 50 9 chr5_random 923393 923611 -1785169 + L1M4 LINE L1 4308 4534 -1612 387 282 2 0 chr5_random 923609 923737 -1785043 + L1MEc LINE L1 2179 2274 -3941 * 1282 271 92 16 chr5_random 923749 924262 -1784518 - MLT1F LTR MaLR 0 542 1 1015 254 109 37 chr5_random 924262 924757 -1784023 + L1MEc LINE L1 2316 2815 -3400 811 227 44 58 chr5_random 924790 925155 -1783625 + L1M4 LINE L1 4156 4515 -1631 416 217 167 7 chr5_random 925232 925370 -1783410 + L1ME1 LINE L1 6002 6161 -5 3364 218 58 31 chr5_random 925379 925922 -1782858 - L1MB7 LINE L1 -20 6164 5637 668 217 68 0 chr5_random 925922 926083 -1782697 - FAM SINE Alu -3 172 1 3364 218 58 31 chr5_random 926083 927252 -1781528 - L1MB7 LINE L1 -547 5637 4342 1850 135 48 7 chr5_random 927252 927541 -1781239 - AluSx SINE Alu -11 301 1 3364 218 58 31 chr5_random 927541 927838 -1780942 - L1MB7 LINE L1 -1842 4342 4055 3102 224 24 57 chr5_random 1127845 1129297 -1579483 + L1 LINE L1 3997 5353 -793 1477 267 182 21 chr5_random 1129397 1130331 -1578449 + L1ME LINE L1 4069 5174 -972 1820 84 0 0 chr5_random 1130331 1130557 -1578223 + AluY SINE Alu 81 306 -5 1477 267 182 21 chr5_random 1130557 1130618 -1578162 + L1ME LINE L1 5174 5224 -922 487 220 43 21 chr5_random 1130614 1130755 -1578025 + L1ME LINE L1 5477 5620 -544 * 1884 124 8 0 chr5_random 1133375 1133640 -1575140 + AluSx SINE Alu 1 267 -45 11835 39 2 0 chr5_random 1133741 1135803 -1572977 + L1PA4 LINE L1 3859 5923 -232 265 248 167 94 chr5_random 1136247 1136481 -1572299 + MIR SINE MIR 1 251 -11 298 281 77 40 chr5_random 1137721 1137930 -1570850 + MIR SINE MIR 26 249 -13 1024 226 106 34 chr5_random 1138231 1138580 -1570200 + MLT1A2 LTR MaLR 1 374 0 494 285 64 95 chr5_random 1139378 1139806 -1568974 - L2 LINE L2 -738 2576 2165 1401 124 50 0 chr5_random 1139806 1140024 -1568756 + MER30 DNA MER1_type 1 229 -1 494 285 64 95 chr5_random 1140024 1140111 -1568669 - L2 LINE L2 -1149 2165 2077 388 237 76 8 chr5_random 1140182 1140300 -1568480 + L1PB4 LINE L1 6028 6153 -3 202 118 0 29 chr5_random 1140310 1140344 -1568436 + (GGAA)n Simple_repeat Simple_repeat 1 33 0 408 171 43 21 chr5_random 1140349 1140489 -1568291 + GA-rich Low_complexity Low_complexity 2 144 0 * 714 71 35 0 chr5_random 1140475 1140588 -1568192 + (GAAA)n Simple_repeat Simple_repeat 3 119 0 1028 217 123 3 chr5_random 1140629 1140961 -1567819 + MLT1B LTR MaLR 9 380 -10 394 363 72 34 chr5_random 1140969 1141355 -1567425 - L2 LINE L2 -1415 1899 1499 236 277 45 54 chr5_random 1141472 1141584 -1567196 - MIR SINE MIR -62 146 36 285 181 0 0 chr5_random 1142558 1142627 -1566153 + L1ME LINE L1 5591 5655 -509 208 137 39 0 chr5_random 1143329 1143380 -1565400 + CT-rich Low_complexity Low_complexity 2 54 0 534 261 22 8 chr5_random 1143575 1143709 -1565071 + MIR SINE MIR 17 152 -110 2704 160 79 17 chr5_random 1143724 1144357 -1564423 + L1MB7 LINE L1 5497 6168 -16 208 267 23 47 chr5_random 1144372 1144458 -1564322 + MIR SINE MIR 179 262 0 1075 137 12 0 chr5_random 1145486 1145647 -1563133 - FRAM SINE Alu -18 158 1 22 80 0 0 chr5_random 1146883 1146933 -1561847 + AT_rich Low_complexity Low_complexity 1 50 0 275 170 0 0 chr5_random 1147870 1147917 -1560863 + tRNA-Arg-CGC tRNA tRNA 2 48 -28 743 244 58 76 chr5_random 1148145 1148539 -1560241 + L1MC4a LINE L1 5597 5983 -1825 24 32 0 0 chr5_random 1148670 1148701 -1560079 + AT_rich Low_complexity Low_complexity 1 31 0 339 252 9 47 chr5_random 1149227 1149334 -1559446 - L1ME4a LINE L1 -40 6081 5979 397 175 62 10 chr5_random 1150298 1150395 -1558385 - MER112 DNA MER1_type -98 162 61 1656 103 15 4 chr5_random 1151850 1152123 -1556657 - MER57-int LTR ERV1 -1438 4825 4550 1265 148 74 0 chr5_random 1152115 1152332 -1556448 - MER57-int LTR ERV1 -957 6580 6348 * 262 258 91 0 chr5_random 1152390 1152456 -1556324 - tRNA-Met-i tRNA tRNA -2 73 2 562 203 108 6 chr5_random 1152536 1152694 -1556086 + LTR52-int LTR ERVL 793 966 -2590 980 151 6 0 chr5_random 1152711 1153058 -1555722 + GA-rich Low_complexity Low_complexity 1 349 0 2117 226 71 53 chr5_random 1153095 1153556 -1555224 + LTR52-int LTR ERVL 1065 1545 -4140 1506 190 43 39 chr5_random 1153556 1153861 -1554919 - AluJo SINE Alu -6 306 1 2117 226 71 53 chr5_random 1153861 1154113 -1554667 + LTR52-int LTR ERVL 1545 1791 -3894 4822 88 4 24 chr5_random 1154161 1154879 -1553901 - L1PB1 LINE L1 0 6151 5448 298 273 109 16 chr5_random 1156122 1156250 -1552530 + MIR SINE MIR 119 258 -4 306 336 34 20 chr5_random 1157073 1157219 -1551561 - MER5A DNA MER1_type -6 183 36 276 340 28 35 chr5_random 1157095 1157239 -1551541 + MER5A DNA MER1_type 43 185 -4 * 2483 118 8 5 chr5_random 1157986 1158385 -1550395 + L1P4 LINE L1 5393 5792 -374 397 115 0 0 chr5_random 1158390 1158451 -1550329 - MSTA LTR MaLR -2 426 366 2421 43 3 12 chr5_random 1158551 1158922 -1549858 + L1PA4 LINE L1 5806 6173 0 1634 289 150 31 chr5_random 1158922 1159174 -1549606 - L2 LINE L2 -308 3005 2784 1805 112 4 4 chr5_random 1159174 1159425 -1549355 + AluSx SINE Alu 58 308 -4 1634 289 150 31 chr5_random 1159425 1159979 -1548801 - L2 LINE L2 -529 2784 2108 276 345 20 20 chr5_random 1160701 1160849 -1547931 - L2 LINE L2 -473 2841 2694 203 191 0 21 chr5_random 1162775 1162822 -1545958 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 417 284 149 10 chr5_random 1163546 1163740 -1545040 - MIR SINE MIR -38 224 4 281 299 103 17 chr5_random 1163770 1163887 -1544893 - MARNA DNA Mariner -366 220 94 720 135 2 0 chr5_random 1164286 1167014 -1541766 + CER Satellite Satellite 1 2733 -8 6890 41 0 0 chr5_random 1167030 1167933 -1540847 - L1P LINE L1 -2977 3169 2267 4399 27 0 0 chr5_random 1167934 1168695 -1540085 + L1P2 LINE L1 5033 5793 -362 784 236 11 0 chr5_random 1169884 1170058 -1538722 - L1MD2 LINE L1 -46 6313 6138 1044 166 5 42 chr5_random 1170101 1170294 -1538486 + AluJo SINE Alu 122 307 -5 2233 101 0 10 chr5_random 1170445 1170743 -1538037 - AluSg1 SINE Alu -14 295 1 230 318 29 40 chr5_random 1171069 1171242 -1537538 + L1MC5 LINE L1 7715 7885 -76 1723 210 51 34 chr5_random 1171378 1171994 -1536786 + L1MB3 LINE L1 4945 5557 -745 379 154 0 13 chr5_random 1171994 1172072 -1536708 + L1MB3 LINE L1 6094 6170 -13 1723 210 51 34 chr5_random 1172072 1172131 -1536649 + L1MB3 LINE L1 5557 5613 -689 28 0 0 0 chr5_random 1172334 1172362 -1536418 + AT_rich Low_complexity Low_complexity 1 28 0 1558 184 7 11 chr5_random 1172965 1173248 -1535532 + AluJo SINE Alu 18 299 -13 352 319 95 37 chr5_random 1173846 1174172 -1534608 + L1MEc LINE L1 36 380 -6016 861 224 192 42 chr5_random 1174515 1174793 -1533987 + L1MEc LINE L1 2435 2670 -3545 2074 122 3 22 chr5_random 1174793 1175105 -1533675 + AluSq SINE Alu 5 310 -3 861 224 192 42 chr5_random 1175105 1175367 -1533413 + L1MEc LINE L1 2670 3056 -3159 374 236 80 72 chr5_random 1175397 1175515 -1533265 + L1MEc LINE L1 3139 3255 -2960 1287 117 84 5 chr5_random 1175515 1175728 -1533052 - MER30 DNA MER1_type 0 230 1 374 236 80 72 chr5_random 1175728 1175995 -1532785 + L1MEc LINE L1 3255 3527 -2688 608 161 3 0 chr5_random 1176102 1177323 -1531457 - CER Satellite Satellite 0 1224 1 1155 187 63 60 chr5_random 1177358 1177642 -1531138 + AluJo SINE Alu 2 286 -16 871 119 20 7 chr5_random 1177742 1177893 -1530887 - MER53 DNA DNA -1 188 36 23 0 0 0 chr5_random 1178720 1178743 -1530037 + AT_rich Low_complexity Low_complexity 1 23 0 201 239 46 146 chr5_random 1179472 1179602 -1529178 + L2 LINE L2 3197 3313 0 2168 124 0 0 chr5_random 1179971 1180270 -1528510 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr5_random 1181842 1181864 -1526916 + AT_rich Low_complexity Low_complexity 1 22 0 332 261 68 71 chr5_random 1181923 1182248 -1526532 + L1MEc LINE L1 1135 1458 -4938 2314 66 0 0 chr5_random 1182374 1182662 -1526118 + L1P LINE L1 4 291 -5855 * 8438 57 1 0 chr5_random 1182656 1183748 -1525032 + L1P LINE L1 2036 3128 -3018 297 0 0 0 chr5_random 1184295 1184328 -1524452 + (CA)n Simple_repeat Simple_repeat 2 34 0 261 83 0 0 chr5_random 1184820 1184856 -1523924 + (T)n Simple_repeat Simple_repeat 1 36 0 635 248 0 0 chr5_random 1186083 1186208 -1522572 + FLAM_C SINE Alu 1 125 -18 625 292 22 50 chr5_random 1186424 1186701 -1522079 - L2 LINE L2 0 3313 3045 998 207 67 30 chr5_random 1186740 1187074 -1521706 + MLT1D LTR MaLR 70 505 0 330 295 85 55 chr5_random 1187074 1187274 -1521506 - L2 LINE L2 -264 3049 2844 239 236 0 18 chr5_random 1187429 1187484 -1521296 + MER63 DNA MER1_type 677 730 -330 515 171 0 0 chr5_random 1188060 1188148 -1520632 + Ricksha DNA DNA 7 94 -1160 2147 128 58 17 chr5_random 1188170 1188530 -1520250 - THE1C LTR MaLR 0 375 1 492 188 0 10 chr5_random 1188530 1188626 -1520154 - THE1C-int LTR MaLR 0 1580 1486 * 7138 141 52 6 chr5_random 1188623 1189783 -1518997 - THE1C-int LTR MaLR -367 1213 1 2472 116 11 19 chr5_random 1189783 1190161 -1518619 - THE1C LTR MaLR 0 375 1 701 165 0 0 chr5_random 1190162 1190271 -1518509 - FLAM_C SINE Alu -32 111 3 1601 176 6 2 chr5_random 1190272 1190599 -1518181 + Ricksha DNA DNA 95 501 -2745 10902 157 23 38 chr5_random 1190601 1192507 -1516273 + Ricksha DNA DNA 1189 3063 -183 2120 117 0 0 chr5_random 1192507 1192805 -1515975 - AluY SINE Alu -13 298 1 10902 157 23 38 chr5_random 1192805 1192987 -1515793 + Ricksha DNA DNA 3063 3246 0 183 42 0 0 chr5_random 1193856 1193880 -1514900 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1971 189 33 14 chr5_random 1193889 1194325 -1514455 - L1MB4 LINE L1 -63 6117 5684 1198 231 12 0 chr5_random 1194325 1194580 -1514200 + 7SLRNA srpRNA srpRNA 3 260 -60 405 221 12 0 chr5_random 1194960 1195046 -1513734 + 7SLRNA srpRNA srpRNA 230 316 -4 919 138 13 188 chr5_random 1195059 1195313 -1513467 - L1MB4 LINE L1 -483 5700 5403 1455 133 54 117 chr5_random 1195313 1195629 -1513151 - AluSx SINE Alu -15 297 2 919 138 13 188 chr5_random 1195629 1195682 -1513098 - L1MB4 LINE L1 -780 5403 5454 270 0 0 0 chr5_random 1195682 1195712 -1513068 + (TG)n Simple_repeat Simple_repeat 2 31 0 919 138 13 188 chr5_random 1195712 1195743 -1513037 - L1MB4 LINE L1 -728 5455 5420 200 231 103 39 chr5_random 1195765 1195843 -1512937 + MIR SINE MIR 112 194 -68 310 45 23 0 chr5_random 1196606 1196650 -1512130 - MADE1 DNA Mariner -2 78 34 29 0 0 0 chr5_random 1197023 1197052 -1511728 + AT_rich Low_complexity Low_complexity 1 29 0 1512 194 7 7 chr5_random 1197328 1197611 -1511169 + AluJb SINE Alu 7 289 -23 1148 168 40 67 chr5_random 1197679 1197976 -1510804 + AluJo SINE Alu 7 295 -17 1426 186 82 1 chr5_random 1198385 1198851 -1509929 + Charlie1b DNA MER1_type 22 520 -3 4176 201 54 21 chr5_random 1199024 1199700 -1509080 - L1MA9 LINE L1 0 6548 5896 1691 170 42 0 chr5_random 1199700 1199989 -1508791 - AluJo SINE Alu -11 301 1 4176 201 54 21 chr5_random 1199989 1201288 -1507492 - L1MA9 LINE L1 -652 5896 4502 355 188 16 0 chr5_random 1201344 1201408 -1507372 + MER2 DNA MER2_type 281 345 0 367 226 32 11 chr5_random 1201408 1201501 -1507279 - MER2 DNA MER2_type -250 95 1 7216 243 38 7 chr5_random 1201501 1203750 -1505030 - L1MA9 LINE L1 -1871 4511 2187 685 258 58 26 chr5_random 1204336 1204526 -1504254 + MER91A DNA MER1_type 1 196 0 888 301 77 39 chr5_random 1204528 1204944 -1503836 + MLT1K LTR MaLR 147 578 -10 333 267 0 11 chr5_random 1205789 1205879 -1502901 - LTR67 LTR ERVL -35 522 434 960 220 49 106 chr5_random 1206410 1206797 -1501983 + MLT1A1 LTR MaLR 1 365 0 1706 193 77 35 chr5_random 1207118 1207600 -1501180 + MLT1D LTR MaLR 1 502 -3 226 340 68 0 chr5_random 1208343 1208446 -1500334 + MIR SINE MIR 80 189 -73 180 305 24 12 chr5_random 1208470 1208552 -1500228 - MIR SINE MIR -12 250 168 248 353 26 17 chr5_random 1208625 1208741 -1500039 - MIR SINE MIR -122 140 24 669 203 0 0 chr5_random 1209159 1209282 -1499498 + AluJb SINE Alu 3 125 -187 366 308 41 20 chr5_random 1211149 1211295 -1497485 - MIR SINE MIR -90 172 24 231 56 167 0 chr5_random 1211608 1211644 -1497136 + L1M2 LINE L1 5710 5751 -549 373 232 18 62 chr5_random 1211760 1211872 -1496908 + MLT1I LTR MaLR 63 169 -240 950 217 74 50 chr5_random 1211873 1212218 -1496562 + MER67C LTR ERV1 173 511 -3 1407 96 0 5 chr5_random 1212364 1212562 -1496218 + L1PA7 LINE L1 5955 6151 -3 280 318 56 9 chr5_random 1212794 1212901 -1495879 - MIR SINE MIR -71 191 80 394 238 9 29 chr5_random 1213047 1213152 -1495628 + L1MA6 LINE L1 7 109 -6921 12445 235 43 18 chr5_random 1213193 1216650 -1492130 + L1MA6 LINE L1 929 4568 -2538 1454 214 38 3 chr5_random 1216650 1216940 -1491840 + AluJo SINE Alu 8 307 -5 12445 235 43 18 chr5_random 1216940 1218675 -1490105 + L1MA6 LINE L1 4568 6260 -846 2306 164 32 5 chr5_random 1218776 1219208 -1489572 + L1MA6 LINE L1 6305 6748 -512 777 219 7 0 chr5_random 1219210 1219356 -1489424 - MSTA LTR MaLR 0 428 282 764 181 34 13 chr5_random 1219351 1219500 -1489280 - MSTA LTR MaLR -274 152 1 * 983 177 42 5 chr5_random 1219512 1219704 -1489076 + L1MA6 LINE L1 6769 6967 -293 311 192 13 13 chr5_random 1219709 1219787 -1488993 + L1MA6 LINE L1 7183 7260 0 1191 198 44 46 chr5_random 1220310 1220720 -1488060 + LTR37A LTR ERV1 18 426 0 357 336 9 9 chr5_random 1220724 1220831 -1487949 + MER5A DNA MER1_type 60 166 -23 1873 94 0 4 chr5_random 1221348 1221638 -1487142 - AluY SINE Alu 0 327 39 812 167 141 0 chr5_random 1221925 1222081 -1486699 - MER58A DNA MER1_type -13 211 34 38 68 0 0 chr5_random 1223186 1223259 -1485521 + AT_rich Low_complexity Low_complexity 1 73 0 2213 117 19 19 chr5_random 1223259 1223370 -1485410 - L1PA16 LINE L1 -9 6157 6047 1911 144 133 13 chr5_random 1223370 1223752 -1485028 + MSTA LTR MaLR 1 428 0 2213 117 19 19 chr5_random 1223752 1224009 -1484771 - L1PA16 LINE L1 -118 6048 5789 235 163 20 0 chr5_random 1224010 1224059 -1484721 + MSTB LTR MaLR 1 50 -376 4254 239 45 40 chr5_random 1224335 1224363 -1484417 + HERVL74 LTR ERVL 2091 2117 -3568 1651 189 0 7 chr5_random 1224363 1224659 -1484121 - AluJo SINE Alu -18 294 1 4254 239 45 40 chr5_random 1224659 1225904 -1482876 + HERVL74 LTR ERVL 2117 3371 -2314 854 296 73 0 chr5_random 1226399 1226700 -1482080 + LTR53 LTR ERVL 189 511 -8 187 338 42 0 chr5_random 1227770 1227841 -1480939 - MER5A DNA MER1_type 0 189 116 187 354 0 0 chr5_random 1227997 1228045 -1480735 - L2 LINE L2 -22 3250 3203 1270 202 16 20 chr5_random 1228807 1229086 -1479694 + AluJb SINE Alu 35 312 0 204 100 40 20 chr5_random 1231254 1231304 -1477476 + (TG)n Simple_repeat Simple_repeat 2 52 0 370 112 45 50 chr5_random 1231373 1231552 -1477228 + (TG)n Simple_repeat Simple_repeat 2 179 0 246 121 36 36 chr5_random 1231569 1231652 -1477128 + (TG)n Simple_repeat Simple_repeat 1 83 0 312 126 54 36 chr5_random 1231694 1231861 -1476919 + (TG)n Simple_repeat Simple_repeat 2 171 0 278 144 63 29 chr5_random 1231938 1232211 -1476569 + (TG)n Simple_repeat Simple_repeat 1 282 0 24 53 0 0 chr5_random 1233044 1233082 -1475698 + AT_rich Low_complexity Low_complexity 1 38 0 797 248 58 0 chr5_random 1233504 1233746 -1475034 - L1MC1 LINE L1 -1 6332 6077 1532 199 30 7 chr5_random 1233748 1234049 -1474731 + L1MC1 LINE L1 5793 6100 -233 376 141 31 0 chr5_random 1234070 1234134 -1474646 - AluSc SINE Alu -8 291 226 723 136 1 1 chr5_random 1234234 1240587 -1468193 - CER Satellite Satellite 0 6352 1 40 21 0 0 chr5_random 1241877 1241924 -1466856 + AT_rich Low_complexity Low_complexity 1 47 0 545 221 9 9 chr5_random 1242287 1242399 -1466381 + MER49 LTR ERV1 4 115 -808 1726 117 41 21 chr5_random 1242399 1242690 -1466090 - LTR66 LTR ERVL 0 610 314 1529 75 20 0 chr5_random 1242685 1242886 -1465894 - LTR66 LTR ERVL -401 209 5 * 2285 119 18 0 chr5_random 1242890 1243226 -1465554 - HERVL66 LTR ERVL 0 4329 3988 1017 262 9 9 chr5_random 1243226 1243455 -1465325 + L1P3 LINE L1 44 272 -6189 758 135 3 2 chr5_random 1243560 1269696 -1439084 + CER Satellite Satellite 1 26172 -31 429 67 8 176 chr5_random 1269701 1269724 -1439056 - SVA Other Other -431 955 930 8286 57 0 0 chr5_random 1269724 1270684 -1438096 - LTR5 LTR ERVK -9 960 1 429 67 8 176 chr5_random 1270684 1270779 -1438001 - SVA Other Other -456 930 857 27479 39 0 0 chr5_random 1270780 1273978 -1434802 - HERVK LTR ERVK -96 7147 3951 765 135 3 1 chr5_random 1274080 1281032 -1427748 + CER Satellite Satellite 1 6938 -8434 8380 56 0 0 chr5_random 1281032 1282001 -1426779 - LTR5 LTR ERVK 0 969 1 765 135 3 1 chr5_random 1282001 1289384 -1419396 + CER Satellite Satellite 6938 15332 -40 906 210 6 6 chr5_random 1289492 1289673 -1419107 + AluJo SINE Alu 123 303 -9 5861 145 34 76 chr5_random 1289677 1290854 -1417926 - Tigger1 DNA MER2_type 0 2418 1291 1989 120 50 7 chr5_random 1290870 1291170 -1417610 - AluSq SINE Alu 0 313 1 1838 139 20 20 chr5_random 1291171 1291473 -1417307 - Tigger1 DNA MER2_type -1095 1323 1022 585 165 19 0 chr5_random 1291479 1291582 -1417198 - Tigger1 DNA MER2_type -1908 510 406 210 235 15 15 chr5_random 1291718 1291786 -1416994 + (CCCGG)n Simple_repeat Simple_repeat 5 72 0 338 268 27 32 chr5_random 1292537 1292848 -1415932 - LSAU Satellite Satellite 0 498 141 341 215 0 31 chr5_random 1292927 1293057 -1415723 + GA-rich Low_complexity Low_complexity 4 129 0 237 195 0 0 chr5_random 1293456 1293497 -1415283 - MLT1D LTR MaLR -106 399 359 3384 224 33 32 chr5_random 1293580 1294742 -1414038 + L1MB3 LINE L1 4910 6183 0 388 311 0 0 chr5_random 1294752 1294874 -1413906 + L1ME3A LINE L1 5817 5938 -232 2707 162 41 2 chr5_random 1296657 1297121 -1411659 + LTR43 LTR ERV1 121 602 0 782 264 13 53 chr5_random 1297121 1297420 -1411360 + LTR43-int LTR ERV1 1 287 -4511 192 135 0 0 chr5_random 1297625 1297662 -1411118 + (T)n Simple_repeat Simple_repeat 1 37 0 7397 50 0 2 chr5_random 1297669 1298850 -1409930 - L1PA2 LINE L1 0 6155 4976 17594 50 4 3 chr5_random 1298850 1301064 -1407716 + L1P LINE L1 2721 4936 -1210 1833 196 80 46 chr5_random 1301138 1301678 -1407102 - L1MA9 LINE L1 0 6312 5755 3202 219 64 28 chr5_random 1301684 1303074 -1405706 - L1MA9 LINE L1 -598 5693 4255 37 23 0 0 chr5_random 1304640 1304684 -1404096 + AT_rich Low_complexity Low_complexity 1 44 0 1995 149 10 0 chr5_random 1304750 1305052 -1403728 - AluSg SINE Alu -5 305 1 3852 205 27 13 chr5_random 1305053 1305902 -1402878 - L1PB4 LINE L1 0 6156 5296 * 4559 213 22 15 chr5_random 1305889 1307053 -1401727 - L1PB4 LINE L1 -784 5362 4190 228 245 75 28 chr5_random 1307074 1307180 -1401600 + MER5B DNA MER1_type 67 177 -1 1892 148 13 7 chr5_random 1307210 1307515 -1401265 - AluSq SINE Alu -4 309 3 234 272 19 48 chr5_random 1307547 1307650 -1401130 - MER5A DNA MER1_type -59 130 31 184 241 26 95 chr5_random 1307878 1307994 -1400786 - MIR SINE MIR -2 260 153 2215 124 0 0 chr5_random 1308739 1309037 -1399743 + AluY SINE Alu 2 299 -12 1572 191 123 10 chr5_random 1309306 1309689 -1399091 + MSTB LTR MaLR 1 426 0 1231 231 41 7 chr5_random 1309891 1310181 -1398599 - AluJo SINE Alu -11 301 2 33290 71 3 0 chr5_random 1310272 1314523 -1394257 + L1P LINE L1 2 4266 -1880 777 147 4 1 chr5_random 1314593 1347766 -1361014 + CER Satellite Satellite 1 33248 -32 760 144 3 1 chr5_random 1347867 1376133 -1332647 - CER Satellite Satellite 0 28295 1 40 21 0 0 chr5_random 1377423 1377470 -1331310 + AT_rich Low_complexity Low_complexity 1 47 0 551 221 9 9 chr5_random 1377833 1377945 -1330835 + MER49 LTR ERV1 4 115 -808 1738 117 41 21 chr5_random 1377945 1378236 -1330544 - LTR66 LTR ERVL 0 610 314 1541 75 20 0 chr5_random 1378231 1378432 -1330348 - LTR66 LTR ERVL -401 209 5 * 2285 119 18 0 chr5_random 1378436 1378772 -1330008 - HERVL66 LTR ERVL 0 4329 3988 36648 99 10 9 chr5_random 1378772 1384869 -1323911 + L1PA3 LINE L1 46 6147 -8 21 0 0 0 chr5_random 1384869 1384890 -1323890 + AT_rich Low_complexity Low_complexity 1 21 0 4472 203 69 8 chr5_random 1385388 1386418 -1322362 + L1MC1 LINE L1 5239 6329 -4 21 71 0 0 chr5_random 1386441 1386483 -1322297 + AT_rich Low_complexity Low_complexity 1 42 0 763 179 39 6 chr5_random 1386519 1386675 -1322105 + L1MA10 LINE L1 5759 5919 -270 754 220 42 36 chr5_random 1386677 1386991 -1321789 + MSTD LTR MaLR 1 383 -13 894 269 35 32 chr5_random 1387021 1387234 -1321546 + L1MA10 LINE L1 5914 6130 -204 1969 164 130 18 chr5_random 1387234 1387619 -1321161 + MSTA LTR MaLR 1 428 0 894 269 35 32 chr5_random 1387619 1387747 -1321033 + L1MA10 LINE L1 6130 6256 -78 217 326 29 72 chr5_random 1387893 1387999 -1320781 - L2 LINE L2 -938 2376 2276 1963 173 56 12 chr5_random 1387999 1388322 -1320458 - MER1B DNA MER1_type 0 337 1 217 326 29 72 chr5_random 1388322 1388353 -1320427 - L2 LINE L2 -1038 2276 2245 1500 153 52 126 chr5_random 1388586 1388952 -1319828 - MER44D DNA MER2_type 0 609 1 225 167 56 19 chr5_random 1390667 1390721 -1318059 + MLT1H LTR MaLR 494 549 0 1611 186 0 24 chr5_random 1391263 1391554 -1317226 - AluJo SINE Alu -27 285 2 1712 141 0 25 chr5_random 1391951 1392227 -1316553 - AluSx SINE Alu 0 312 44 1741 150 8 0 chr5_random 1393687 1393954 -1314826 - AluSx SINE Alu -13 299 31 3482 89 80 33 chr5_random 1394006 1394558 -1314222 - LTR61 LTR ERV1 -17 578 1 7833 235 26 30 chr5_random 1394560 1396396 -1312384 - HERV3 LTR ERV1 0 8426 6599 2059 213 10 23 chr5_random 1396396 1396791 -1311989 - HERV3 LTR ERV1 -2895 5531 5142 477 260 32 16 chr5_random 1396828 1396951 -1311829 - HERV3 LTR ERV1 -4633 3793 3669 * 4097 235 18 20 chr5_random 1396922 1397388 -1311392 - HERV3 LTR ERV1 -5957 2469 2004 2192 120 0 3 chr5_random 1397388 1397696 -1311084 - AluSg1 SINE Alu -2 307 1 4097 235 18 20 chr5_random 1397696 1398067 -1310713 - HERV3 LTR ERV1 -6422 2004 1634 6794 234 26 44 chr5_random 1398166 1399883 -1308897 - HERV3 LTR ERV1 -6722 1704 19 467 77 90 0 chr5_random 1399901 1399979 -1308801 - LTR61 LTR ERV1 0 595 511 1998 154 0 0 chr5_random 1399980 1400285 -1308495 - AluSx SINE Alu -7 305 1 2196 232 37 40 chr5_random 1400287 1400718 -1308062 - L1MEc LINE L1 -1957 5000 4570 2326 99 0 13 chr5_random 1400718 1401032 -1307748 - AluY SINE Alu -1 310 1 2196 232 37 40 chr5_random 1401032 1401256 -1307524 - L1MEc LINE L1 -2387 4570 4347 341 270 9 0 chr5_random 1401263 1401378 -1307402 + L1M4 LINE L1 2997 3112 -3034 575 265 56 21 chr5_random 1401388 1401675 -1307105 - L1MEc LINE L1 -2617 4340 4044 265 256 70 62 chr5_random 1401711 1401840 -1306940 - LTR47B LTR ERVL -38 405 276 2715 260 74 51 chr5_random 1402104 1402908 -1305872 - L1MEc LINE L1 -2909 4048 3264 1999 157 0 0 chr5_random 1402908 1403207 -1305573 - AluSq SINE Alu -14 299 1 2715 260 74 51 chr5_random 1403207 1403552 -1305228 - L1MEc LINE L1 -3693 3264 2928 2421 84 0 3 chr5_random 1403552 1403860 -1304920 - AluSc SINE Alu -1 308 2 2715 260 74 51 chr5_random 1403860 1404308 -1304472 - L1MEc LINE L1 -4029 2928 2497 721 243 94 43 chr5_random 1404527 1404563 -1304217 - L1MEc LINE L1 -4543 2492 2459 258 32 0 0 chr5_random 1404563 1404594 -1304186 + (TG)n Simple_repeat Simple_repeat 2 32 0 721 243 94 43 chr5_random 1404594 1405025 -1303755 - L1MEc LINE L1 -4576 2459 1940 304 179 0 0 chr5_random 1405033 1405089 -1303691 - L1MEc LINE L1 -6713 146 91 2022 191 35 42 chr5_random 1406273 1406454 -1302326 + MSTB LTR MaLR 1 182 -244 2148 117 13 3 chr5_random 1406454 1406762 -1302018 - AluY SINE Alu 0 311 1 2022 191 35 42 chr5_random 1406762 1407009 -1301771 + MSTB LTR MaLR 182 426 0 659 299 10 47 chr5_random 1407148 1407446 -1301334 + MER4B-int LTR ERV1 6977 7263 -553 796 231 86 81 chr5_random 1407509 1407869 -1300911 + MER57A LTR ERV1 42 403 0 2247 99 0 0 chr5_random 1408374 1408658 -1300122 + AluSc SINE Alu 6 289 -20 1342 175 4 33 chr5_random 1408948 1409222 -1299558 + MER4B-int LTR ERV1 1028 1293 -5465 1253 144 41 63 chr5_random 1409207 1409297 -1299483 + MER4B-int LTR ERV1 1461 1551 -5207 * 1824 131 32 0 chr5_random 1409297 1409580 -1299200 + AluSg SINE Alu 1 292 -18 1253 144 41 63 chr5_random 1409580 1409760 -1299020 + MER4B-int LTR ERV1 1551 1725 -5033 469 181 181 0 chr5_random 1409756 1409850 -1298930 + MER4B-int LTR ERV1 6645 6755 -3 * 3019 129 117 51 chr5_random 1409853 1410279 -1298501 + MER4B LTR ERV1 1 476 -134 1918 116 0 38 chr5_random 1410279 1410572 -1298208 + AluSg SINE Alu 8 289 -21 3019 129 117 51 chr5_random 1410572 1410717 -1298063 + MER4B LTR ERV1 476 610 0 543 296 142 21 chr5_random 1410790 1411023 -1297757 - MIR SINE MIR 0 262 2 242 249 67 3 chr5_random 1411138 1411230 -1297550 - L1MC/D LINE L1 -439 5682 5614 3579 145 73 31 chr5_random 1411833 1412473 -1296307 - PABL_B LTR ERV1 0 667 1 2259 157 31 38 chr5_random 1412517 1412641 -1296139 - MER65A LTR ERV1 -2 443 320 2442 164 33 26 chr5_random 1412641 1412872 -1295908 - MSTB LTR MaLR -2 424 187 2027 134 7 3 chr5_random 1412872 1413170 -1295610 - AluSx SINE Alu -13 299 1 2442 164 33 26 chr5_random 1413170 1413359 -1295421 - MSTB LTR MaLR -239 187 1 2259 157 31 38 chr5_random 1413359 1413679 -1295101 - MER65A LTR ERV1 -125 320 2 2145 256 50 13 chr5_random 1413687 1414307 -1294473 - MER65A-int LTR ERV1 -2 4869 4227 1626 227 60 86 chr5_random 1414305 1414807 -1293973 - MER65A-int LTR ERV1 -778 4093 3605 * 318 238 12 38 chr5_random 1414880 1414960 -1293820 - LTR49-int LTR ERV1 -976 3960 3883 1215 232 112 18 chr5_random 1414970 1415407 -1293373 - LTR49-int LTR ERV1 -1055 4891 3412 431 208 48 13 chr5_random 1415407 1415649 -1293131 + AluJb SINE Alu 2 288 -24 436 180 167 92 chr5_random 1415650 1415891 -1292889 - LTR49-int LTR ERV1 -1767 4564 4359 415 170 74 59 chr5_random 1415901 1416036 -1292744 - LTR49-int LTR ERV1 -2926 3672 3536 1225 175 90 106 chr5_random 1416169 1416717 -1292063 - LTR49-int LTR ERV1 -3117 3481 1998 443 242 103 15 chr5_random 1416821 1416993 -1291787 - L1M3e LINE L1 -5927 1110 3 29 0 0 0 chr5_random 1417390 1417419 -1291361 + AT_rich Low_complexity Low_complexity 1 29 0 1060 272 82 71 chr5_random 1418168 1418688 -1290092 - LTR49-int LTR ERV1 -3610 1261 729 1904 133 3 23 chr5_random 1418688 1418990 -1289790 - AluSc SINE Alu -8 301 6 1060 272 82 71 chr5_random 1418990 1419175 -1289605 - LTR49-int LTR ERV1 -4142 729 548 1076 110 7 1 chr5_random 1419377 1420440 -1288340 + ACRO1 Satellite acromeric 1 1070 -55 990 202 72 0 chr5_random 1420540 1420763 -1288017 + Tigger7 DNA MER2_type 2245 2483 -4 214 326 29 72 chr5_random 1421000 1421031 -1287749 + L2 LINE L2 2245 2276 -1038 1917 180 56 12 chr5_random 1421031 1421354 -1287426 + MER1B DNA MER1_type 1 337 0 214 326 29 72 chr5_random 1421354 1421460 -1287320 + L2 LINE L2 2276 2376 -938 700 150 150 0 chr5_random 1421734 1421867 -1286913 - MSTA LTR MaLR 0 428 276 534 190 63 9 chr5_random 1422016 1422174 -1286606 - AluJb SINE Alu -24 288 86 1485 182 115 11 chr5_random 1422125 1422394 -1286386 - AluJb SINE Alu -5 297 1 438 186 81 32 chr5_random 1422394 1422518 -1286262 - LOR1-int LTR ERV1 -6428 1692 1563 8014 83 6 7 chr5_random 1422613 1423621 -1285159 - LTR13 LTR ERVK 0 1007 1 4660 201 107 75 chr5_random 1423633 1424941 -1283839 - LOR1-int LTR ERV1 -2793 2078 636 2039 120 3 20 chr5_random 1424941 1425242 -1283538 - AluSc SINE Alu -8 301 6 4660 201 107 75 chr5_random 1425242 1425811 -1282969 - LOR1-int LTR ERV1 -4235 636 87 272 292 22 0 chr5_random 1426603 1426692 -1282088 - MARNA DNA Mariner -220 366 276 1033 271 23 30 chr5_random 1427116 1427419 -1281361 - LTR16C LTR ERVL 0 491 191 2090 162 18 9 chr5_random 1427773 1428107 -1280673 - MER1B DNA MER1_type 0 337 1 1450 199 35 3 chr5_random 1428226 1428508 -1280272 + AluJb SINE Alu 1 291 -21 3691 161 45 21 chr5_random 1428864 1428878 -1279902 + L1PA16 LINE L1 5482 5494 -672 2173 105 0 3 chr5_random 1428878 1429187 -1279593 + AluSq SINE Alu 1 308 0 3691 161 45 21 chr5_random 1429187 1429836 -1278944 + L1PA16 LINE L1 5494 6162 -4 643 187 89 24 chr5_random 1429890 1430013 -1278767 + FLAM_C SINE Alu 1 131 -2 32 67 0 0 chr5_random 1430248 1430308 -1278472 + AT_rich Low_complexity Low_complexity 1 60 0 1907 138 3 0 chr5_random 1430453 1430759 -1278021 - AluSx SINE Alu 0 307 1 21 0 0 0 chr5_random 1430764 1430785 -1277995 + AT_rich Low_complexity Low_complexity 1 21 0 1930 199 110 39 chr5_random 1431062 1431128 -1277652 - Charlie1a DNA MER1_type -1378 1383 1323 1838 122 3 56 chr5_random 1431128 1431432 -1277348 + AluSc SINE Alu 1 288 -21 1930 199 110 39 chr5_random 1431432 1431703 -1277077 - Charlie1a DNA MER1_type -1438 1323 1073 1937 113 39 11 chr5_random 1431703 1431986 -1276794 + AluSx SINE Alu 6 296 -16 1930 199 110 39 chr5_random 1431986 1432409 -1276371 - Charlie1a DNA MER1_type -1688 1073 568 1310 181 111 26 chr5_random 1432409 1432545 -1276235 - AluJb SINE Alu -14 298 175 6436 121 27 11 chr5_random 1432545 1433482 -1275298 + LTR13 LTR ERVK 3 954 0 1310 181 111 26 chr5_random 1433482 1433616 -1275164 - AluJb SINE Alu -137 175 5 958 212 66 69 chr5_random 1433644 1433979 -1274801 - Charlie1a DNA MER1_type -1071 384 51 2237 135 73 9 chr5_random 1434494 1434835 -1273945 - THE1B LTR MaLR -1 363 1 968 161 0 0 chr5_random 1435296 1435445 -1273335 + AluJb SINE Alu 1 149 -163 541 227 39 8 chr5_random 1435740 1435867 -1272913 + MER2 DNA MER2_type 1 131 -214 369 257 0 0 chr5_random 1435867 1435941 -1272839 + Tigger3(Golem) DNA MER2_type 1 74 -2955 3747 131 168 33 chr5_random 1435959 1436970 -1271810 + MER11A LTR ERVK 3 1266 0 543 246 0 0 chr5_random 1437083 1437193 -1271587 + Tigger3(Golem) DNA MER2_type 2919 3028 -1 503 177 206 35 chr5_random 1437221 1437362 -1271418 - MER4C LTR ERV1 -1 464 300 1903 136 90 31 chr5_random 1437420 1437774 -1271006 + THE1C LTR MaLR 1 375 0 1620 130 23 104 chr5_random 1437786 1437919 -1270861 - MER4A LTR ERV1 -311 353 211 2182 127 3 0 chr5_random 1437919 1438218 -1270562 + AluSp SINE Alu 1 300 -13 1620 130 23 104 chr5_random 1438218 1438468 -1270312 - MER4A LTR ERV1 -453 211 1 607 236 96 6 chr5_random 1438468 1438645 -1270135 + MER2 DNA MER2_type 153 345 0 519 339 132 17 chr5_random 1438944 1439360 -1269420 - L2 LINE L2 -786 2528 2065 6888 194 100 62 chr5_random 1439506 1439538 -1269242 + L1MCa LINE L1 23 52 -6374 1937 125 6 67 chr5_random 1439538 1439674 -1269106 + AluSq SINE Alu 1 144 -169 1820 170 3 7 chr5_random 1439674 1439974 -1268806 + AluSx SINE Alu 1 299 -13 1937 125 6 67 chr5_random 1439974 1440164 -1268616 + AluSq SINE Alu 144 307 -6 6888 194 100 62 chr5_random 1440164 1440208 -1268572 + L1MCa LINE L1 52 93 -6333 883 152 0 8 chr5_random 1440208 1440333 -1268447 + FLAM_C SINE Alu 1 124 -9 6888 194 100 62 chr5_random 1440333 1440981 -1267799 + L1MCa LINE L1 93 715 -5711 1215 241 93 32 chr5_random 1440981 1441325 -1267455 + MLT1A1 LTR MaLR 1 365 0 6888 194 100 62 chr5_random 1441325 1442110 -1266670 + L1MCa LINE L1 715 1469 -4957 2332 106 0 0 chr5_random 1442110 1442411 -1266369 + AluY SINE Alu 1 301 -10 6888 194 100 62 chr5_random 1442411 1442667 -1266113 + L1MCa LINE L1 1469 1714 -4712 1929 148 0 7 chr5_random 1442667 1442970 -1265810 - AluSg1 SINE Alu -4 305 5 6888 194 100 62 chr5_random 1442970 1443029 -1265751 + L1MCa LINE L1 1714 1769 -4657 2341 106 0 13 chr5_random 1443029 1443340 -1265440 - AluY SINE Alu 0 311 5 6888 194 100 62 chr5_random 1443340 1443416 -1265364 + L1MCa LINE L1 1769 1841 -4585 1969 141 0 13 chr5_random 1443416 1443715 -1265065 - AluY SINE Alu -16 295 1 6888 194 100 62 chr5_random 1443715 1443956 -1264824 + L1MCa LINE L1 1841 2251 -4175 685 213 41 0 chr5_random 1443980 1444102 -1264678 + AluJ SINE Alu 46 172 -140 806 158 68 15 chr5_random 1444230 1444363 -1264417 + AluJ SINE Alu 157 296 -16 662 194 108 5 chr5_random 1444365 1444551 -1264229 + L1MCa LINE L1 2272 2476 -3950 4162 203 38 6 chr5_random 1444564 1445417 -1263363 + Tigger1 DNA MER2_type 2 881 -1537 355 100 17 17 chr5_random 1445415 1445475 -1263305 + Tigger1 DNA MER2_type 1192 1251 -1167 * 909 188 0 41 chr5_random 1448611 1448781 -1259999 - FRAM SINE Alu -21 155 1 1119 202 14 5 chr5_random 1448807 1449025 -1259755 + AluJo SINE Alu 57 276 -36 802 209 40 25 chr5_random 1450205 1450406 -1258374 + AluJo SINE Alu 102 305 -7 509 248 16 8 chr5_random 1450840 1450964 -1257816 + MER2 DNA MER2_type 7 131 -214 344 300 0 0 chr5_random 1450964 1451044 -1257736 + Tigger3(Golem) DNA MER2_type 1 80 -2949 524 192 48 0 chr5_random 1451157 1451261 -1257519 + Tigger3(Golem) DNA MER2_type 2921 3029 0 1001 200 34 0 chr5_random 1451262 1451467 -1257313 + MER2 DNA MER2_type 131 342 -3 426 351 118 19 chr5_random 1451777 1452199 -1256581 - L2 LINE L2 -786 2528 2065 2047 266 20 28 chr5_random 1452442 1453047 -1255733 + L1MCa LINE L1 70 669 -5757 802 94 4 0 chr5_random 1453058 1454284 -1254496 + CER Satellite Satellite 1 1231 -22 29 28 0 0 chr5_random 1454307 1454343 -1254437 + AT_rich Low_complexity Low_complexity 1 36 0 442 97 0 0 chr5_random 1454377 1454439 -1254341 - CER Satellite Satellite -4 92 31 1684 202 69 16 chr5_random 1454440 1454876 -1253904 - L1MA8 LINE L1 -64 6227 5769 9428 63 24 0 chr5_random 1454918 1456854 -1251926 - L1PA5 LINE L1 -7 6147 4188 3519 76 8 2 chr5_random 1456854 1457339 -1251441 + L1P LINE L1 3122 3609 -2537 770 111 4 3 chr5_random 1457350 1465093 -1243687 + CER Satellite Satellite 1 7747 -6 * 808 190 7 0 chr5_random 1465084 1465221 -1243559 + MLT1A1 LTR MaLR 226 363 -2 3572 189 105 83 chr5_random 1465239 1466674 -1242106 + L1MCa LINE L1 739 2205 -4221 1614 163 57 16 chr5_random 1466673 1467043 -1241737 + L1MCa LINE L1 2104 2488 -3938 * 12410 152 55 38 chr5_random 1467043 1467746 -1241034 + Tigger1 DNA MER2_type 1 691 -1727 2224 116 0 10 chr5_random 1467746 1468056 -1240724 - AluSp SINE Alu -6 307 1 12410 152 55 38 chr5_random 1468056 1468913 -1239867 + Tigger1 DNA MER2_type 691 1532 -886 1905 128 28 10 chr5_random 1468913 1469202 -1239578 + AluSg SINE Alu 1 294 -16 12410 152 55 38 chr5_random 1469202 1469795 -1238985 + Tigger1 DNA MER2_type 1532 2201 -217 1311 188 124 15 chr5_random 1469795 1470061 -1238719 + AluJo SINE Alu 1 295 -7 12410 152 55 38 chr5_random 1470061 1470279 -1238501 + Tigger1 DNA MER2_type 2201 2414 -4 268 296 11 48 chr5_random 1470285 1470346 -1238434 + L1MA10 LINE L1 6100 6162 -172 2308 95 0 0 chr5_random 1470346 1470640 -1238140 - AluY SINE Alu -17 294 1 268 296 11 48 chr5_random 1470640 1470764 -1238016 + L1MA10 LINE L1 6162 6278 -56 839 108 0 17 chr5_random 1470764 1470884 -1237896 + AluSq/x SINE Alu 10 127 -185 875 167 0 0 chr5_random 1471067 1471199 -1237581 + FLAM_C SINE Alu 1 132 -1 455 362 36 5 chr5_random 1471336 1471557 -1237223 - L3 LINE CR1 -1186 391 164 339 336 57 0 chr5_random 1472076 1472198 -1236582 + MER5B DNA MER1_type 1 129 -49 21 0 0 0 chr5_random 1473299 1473320 -1235460 + GC_rich Low_complexity Low_complexity 1 21 0 350 281 186 36 chr5_random 1474026 1474279 -1234501 + L1M4 LINE L1 4742 5032 -1114 682 259 148 30 chr5_random 1474305 1474866 -1233914 + HAL1 LINE L1 1121 1747 -760 697 132 5 0 chr5_random 1475422 1476071 -1232709 - CER Satellite Satellite 0 652 1 719 116 1 0 chr5_random 1476110 1476676 -1232104 - CER Satellite Satellite 0 566 1 14567 43 0 4 chr5_random 1476779 1478509 -1230271 - HERVK LTR ERVK -3428 3815 2093 653 124 8 0 chr5_random 1478509 1478636 -1230144 + CER Satellite Satellite 1 128 -41 900 199 1 0 chr5_random 1478746 1479195 -1229585 + ACRO1 Satellite acromeric 1 449 -55 745 195 37 118 chr5_random 1479891 1480214 -1228566 - L1MB8 LINE L1 -42 6136 5840 717 70 0 0 chr5_random 1480270 1480370 -1228410 + (TTCC)n Simple_repeat Simple_repeat 4 103 0 303 218 0 0 chr5_random 1480672 1480727 -1228053 - Tigger5 DNA MER2_type -2268 55 1 1778 101 71 0 chr5_random 1481116 1481384 -1227396 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 1481384 1481413 -1227367 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 914 215 71 16 chr5_random 1481589 1482050 -1226730 - MER21B LTR ERV1 -132 799 199 234 224 132 13 chr5_random 1482302 1482378 -1226402 - MER5A DNA MER1_type -6 183 99 303 218 0 0 chr5_random 1482929 1482984 -1225796 - Tigger5 DNA MER2_type -2268 55 1 1794 97 71 0 chr5_random 1483373 1483641 -1225139 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 1483641 1483670 -1225110 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 1597 222 163 7 chr5_random 1483833 1484293 -1224487 - MER21B LTR ERV1 -133 730 199 206 237 132 13 chr5_random 1484545 1484621 -1224159 - MER5A DNA MER1_type -6 183 99 180 0 0 0 chr5_random 1485036 1485056 -1223724 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 404 91 15 0 chr5_random 1485099 1485165 -1223615 + (CA)n Simple_repeat Simple_repeat 1 67 0 734 150 4 0 chr5_random 1485617 1489917 -1218863 + CER Satellite Satellite 1 4314 -31 780 117 2 1 chr5_random 1489929 1497338 -1211442 + CER Satellite Satellite 1 7417 0 1937 109 11 0 chr5_random 1497486 1497786 -1210994 - AluY SINE Alu 0 305 3 2074 126 0 0 chr5_random 1497790 1498084 -1210696 - AluSx SINE Alu -17 295 2 30 27 0 0 chr5_random 1498084 1498121 -1210659 + AT_rich Low_complexity Low_complexity 1 37 0 2133 103 0 40 chr5_random 1498246 1498567 -1210213 - AluSx SINE Alu -4 308 1 403 227 31 8 chr5_random 1498698 1498826 -1209954 + L1MB2 LINE L1 2920 3050 -3096 254 200 33 0 chr5_random 1498828 1498888 -1209892 + L1MB2 LINE L1 2989 3050 -3096 234 218 18 0 chr5_random 1498894 1498949 -1209831 + L1MB2 LINE L1 2994 3049 -3097 * 1687 246 55 16 chr5_random 1498946 1499616 -1209164 + L1MB2 LINE L1 2983 3678 -2468 * 3469 231 53 62 chr5_random 1499611 1500040 -1208740 + L1MB2 LINE L1 3935 4366 -1780 1745 167 0 50 chr5_random 1500040 1500363 -1208417 + AluSx SINE Alu 1 307 -5 3469 231 53 62 chr5_random 1500363 1500429 -1208351 + L1MB2 LINE L1 4366 4431 -1715 1890 135 0 10 chr5_random 1500429 1500732 -1208048 + AluSx SINE Alu 1 300 -12 3469 231 53 62 chr5_random 1500732 1501535 -1207245 + L1MB2 LINE L1 4431 5224 -922 1160 158 110 0 chr5_random 1501535 1501744 -1207036 - MER46A DNA MER2_type -3 233 2 3469 231 53 62 chr5_random 1501744 1501801 -1206979 + L1MB2 LINE L1 5224 5280 -866 1926 180 164 115 chr5_random 1502809 1503681 -1205099 + L1MB2 LINE L1 5280 6164 -7 26 0 0 0 chr5_random 1503682 1503708 -1205072 + AT_rich Low_complexity Low_complexity 1 26 0 1461 186 10 17 chr5_random 1503712 1504002 -1204778 - AluJb SINE Alu -24 288 1 1432 229 122 52 chr5_random 1504003 1504113 -1204667 + L1MEc LINE L1 2084 2185 -4030 1541 198 10 3 chr5_random 1504113 1504421 -1204359 + AluJb SINE Alu 1 310 -2 1432 229 122 52 chr5_random 1504421 1505197 -1203583 + L1MEc LINE L1 2185 3003 -3212 273 345 108 0 chr5_random 1505223 1505371 -1203409 + MLT1H1 LTR MaLR 3 166 -389 331 160 138 19 chr5_random 1505603 1505733 -1203047 + MLT1G1 LTR MaLR 408 595 0 691 282 199 28 chr5_random 1506849 1507352 -1201428 + MLT1H1 LTR MaLR 1 589 -1 495 245 0 5 chr5_random 1507817 1508070 -1200710 + ACRO1 Satellite acromeric 1 251 -38 1150 114 5 1 chr5_random 1508402 1510249 -1198531 + ACRO1 Satellite acromeric 1 1852 -55 314 174 62 111 chr5_random 1510945 1511089 -1197691 - L1MB8 LINE L1 -42 6136 6000 1390 132 54 18 chr5_random 1511102 1512793 -1195987 - GSATII Satellite centromeric -8 3385 1756 252 0 0 0 chr5_random 1512793 1512821 -1195959 + (TA)n Simple_repeat Simple_repeat 2 29 0 1390 132 54 18 chr5_random 1512821 1514371 -1194409 - GSATII Satellite centromeric -1637 1756 1 * 3848 157 7 7 chr5_random 1514361 1515055 -1193725 + TAR1 Satellite telomeric 1375 2068 -43 293 131 0 48 chr5_random 1515195 1515279 -1193501 + (TTAGGG)n Simple_repeat Simple_repeat 4 83 0 552 99 6 66 chr5_random 1515318 1515499 -1193281 + (TTAGGG)n Simple_repeat Simple_repeat 1 170 0 6695 223 16 100 chr5_random 1515500 1516231 -1192549 - L1P LINE L1 -927 5219 4428 1031 169 0 0 chr5_random 1516231 1516409 -1192371 - AluSp SINE Alu 0 313 136 6695 223 16 100 chr5_random 1516409 1518061 -1190719 - L1P LINE L1 -1718 4428 2873 577 241 25 25 chr5_random 1518046 1518204 -1190576 - L1M3 LINE L1 -581 5599 5442 * 245 269 0 15 chr5_random 1518190 1518257 -1190523 - L1MA8 LINE L1 -74 6217 6152 * 6026 230 66 26 chr5_random 1519389 1521803 -1186977 - L1M3 LINE L1 -570 5610 3095 544 228 0 0 chr5_random 1522365 1522466 -1186314 - AluJ/FLAM SINE Alu -210 102 2 1518 215 18 6 chr5_random 1522474 1522813 -1185967 - L1M3 LINE L1 -361 5822 5480 1730 151 6 35 chr5_random 1522974 1523292 -1185488 + AluSx SINE Alu 1 309 -3 2023 116 0 7 chr5_random 1523447 1523741 -1185039 - AluSx SINE Alu -20 292 1 2416 252 56 50 chr5_random 1524287 1524573 -1184207 - MER21B LTR ERV1 -57 806 523 1569 190 3 10 chr5_random 1524573 1524868 -1183912 - AluJo SINE Alu -11 301 9 2416 252 56 50 chr5_random 1524868 1524946 -1183834 - MER21B LTR ERV1 -340 523 447 1269 181 0 104 chr5_random 1524946 1525284 -1183496 + AluJb SINE Alu 2 304 -8 2416 252 56 50 chr5_random 1525284 1525701 -1183079 - MER21B LTR ERV1 -416 447 19 236 284 27 14 chr5_random 1525722 1525796 -1182984 - MER21B LTR ERV1 -773 90 16 1254 234 7 13 chr5_random 1525796 1526099 -1182681 - AluJo SINE Alu -11 301 1 553 206 15 22 chr5_random 1526101 1526237 -1182543 - FLAM_C SINE Alu 0 143 9 1329 186 33 66 chr5_random 1526240 1526606 -1182174 + MLT1D LTR MaLR 150 503 -2 1091 228 31 17 chr5_random 1526619 1526909 -1181871 + AluJo SINE Alu 11 304 -8 1110 259 106 12 chr5_random 1526920 1527437 -1181343 - L2 LINE L2 -218 3095 2541 686 223 0 0 chr5_random 1527528 1527658 -1181122 + FLAM_C SINE Alu 1 130 -3 954 228 20 4 chr5_random 1527722 1527976 -1180804 + AluJo SINE Alu 49 306 -6 21 0 0 0 chr5_random 1528098 1528119 -1180661 + AT_rich Low_complexity Low_complexity 1 21 0 255 206 0 93 chr5_random 1528120 1528227 -1180553 + LTR37A LTR ERV1 241 337 -89 1857 157 3 0 chr5_random 1528420 1528725 -1180055 - AluSg SINE Alu -4 306 1 1395 201 3 24 chr5_random 1529029 1529327 -1179453 - AluJo SINE Alu -10 302 11 1817 158 0 7 chr5_random 1529342 1529645 -1179135 - AluSx SINE Alu -6 306 6 2072 229 47 52 chr5_random 1529665 1529728 -1179052 - L1MB8 LINE L1 -5 6173 6111 1318 229 3 3 chr5_random 1529728 1530034 -1178746 + AluJo SINE Alu 1 306 -6 2072 229 47 52 chr5_random 1530034 1530590 -1178190 - L1MB8 LINE L1 -67 6111 5557 456 281 0 0 chr5_random 1530592 1530706 -1178074 + FLAM_C SINE Alu 2 115 -28 388 230 12 11 chr5_random 1530710 1530814 -1177966 - L1MC/D LINE L1 -598 5568 5495 1353 231 3 7 chr5_random 1530814 1531108 -1177672 - AluJb SINE Alu -19 293 1 22 73 0 15 chr5_random 1531362 1531389 -1177391 + AT_rich Low_complexity Low_complexity 1 27 -40 540 144 10 10 chr5_random 1531389 1531486 -1177294 - L1PB1 LINE L1 -2 6149 6053 22 73 0 15 chr5_random 1531486 1531526 -1177254 + AT_rich Low_complexity Low_complexity 27 67 0 1839 149 7 0 chr5_random 1531781 1532107 -1176673 - AluSx SINE Alu 0 328 1 3202 239 107 28 chr5_random 1533001 1533440 -1175340 + L1MC4 LINE L1 2757 3160 -4882 1821 138 7 3 chr5_random 1533440 1533730 -1175050 + AluSx SINE Alu 1 291 -21 3202 239 107 28 chr5_random 1533730 1534995 -1173785 + L1MC4 LINE L1 3160 7678 -364 1601 214 58 0 chr5_random 1534997 1535342 -1173438 + MER47A DNA MER2_type 1 365 -1 476 297 41 48 chr5_random 1535343 1535388 -1173392 + L1M4 LINE L1 3572 3616 -2530 2080 119 3 3 chr5_random 1535388 1535700 -1173080 + AluSp SINE Alu 1 312 -1 476 297 41 48 chr5_random 1535700 1535947 -1172833 + L1M4 LINE L1 3616 3862 -2284 327 210 40 90 chr5_random 1535942 1536042 -1172738 + L1ME1 LINE L1 6070 6164 0 * 25 65 0 0 chr5_random 1536998 1537044 -1171736 + AT_rich Low_complexity Low_complexity 1 46 0 244 343 44 5 chr5_random 1537309 1537513 -1171267 - L1ME LINE L1 -264 5857 5646 3876 142 8 8 chr5_random 1537532 1538154 -1170626 - L1PA15 LINE L1 0 6165 5544 2924 191 61 28 chr5_random 1538157 1538910 -1169870 - LTR1B LTR ERV1 0 785 1 1120 138 53 0 chr5_random 1538910 1539098 -1169682 - L1PA15 LINE L1 -621 5544 5347 440 116 411 0 chr5_random 1539103 1539215 -1169565 - LTR1B LTR ERV1 -242 584 427 1268 204 53 0 chr5_random 1539240 1539563 -1169217 - L1PA15 LINE L1 -843 5303 4964 2476 176 109 16 chr5_random 1539563 1542485 -1166295 - SATR1 Satellite Satellite -4 3192 1 1948 177 147 0 chr5_random 1542501 1542908 -1165872 + SATR1 Satellite Satellite 1 467 -3 1863 194 123 1 chr5_random 1542939 1543415 -1165365 + SATR1 Satellite Satellite 1 533 -105 248 183 17 0 chr5_random 1543580 1543640 -1165140 + (TA)n Simple_repeat Simple_repeat 2 62 0 741 100 0 0 chr5_random 1543892 1544218 -1164562 + CER Satellite Satellite 1 326 -37 854 199 16 5 chr5_random 1544230 1544421 -1164359 + AluJb SINE Alu 119 311 -1 1431 223 129 52 chr5_random 1544432 1545198 -1163582 + L1M4 LINE L1 2110 2934 -3212 273 345 108 0 chr5_random 1545224 1545372 -1163408 + MLT1H1 LTR MaLR 3 166 -389 331 160 138 19 chr5_random 1545604 1545734 -1163046 + MLT1G1 LTR MaLR 408 595 0 691 284 199 28 chr5_random 1546852 1547355 -1161425 + MLT1H1 LTR MaLR 1 589 -1 574 210 0 0 chr5_random 1547816 1548072 -1160708 + ACRO1 Satellite acromeric 1 256 -38 1142 121 3 1 chr5_random 1548404 1549960 -1158820 + ACRO1 Satellite acromeric 1 1559 -55 745 195 37 118 chr5_random 1550656 1550979 -1157801 - L1MB8 LINE L1 -42 6136 5840 651 90 0 0 chr5_random 1551035 1551135 -1157645 + (TTCC)n Simple_repeat Simple_repeat 4 103 0 323 200 0 0 chr5_random 1551437 1551492 -1157288 - Tigger5 DNA MER2_type -2268 55 1 1761 104 71 0 chr5_random 1551881 1552149 -1156631 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 1552149 1552178 -1156602 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 892 220 71 16 chr5_random 1552354 1552815 -1155965 - MER21B LTR ERV1 -132 799 199 234 224 132 13 chr5_random 1553067 1553143 -1155637 - MER5A DNA MER1_type -6 183 99 234 0 0 0 chr5_random 1553560 1553586 -1155194 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 437 76 15 0 chr5_random 1553629 1553695 -1155085 + (CA)n Simple_repeat Simple_repeat 1 67 0 602 218 0 0 chr5_random 1554116 1554372 -1154408 + ACRO1 Satellite acromeric 1 256 -38 1175 117 3 1 chr5_random 1554704 1556235 -1152545 + ACRO1 Satellite acromeric 1 1534 -6 879 231 52 4 chr5_random 1556234 1556624 -1152156 - MER21B LTR ERV1 -213 672 199 * 235 246 31 15 chr5_random 1556876 1556941 -1151839 - MER5A DNA MER1_type -6 183 118 234 0 0 0 chr5_random 1557369 1557395 -1151385 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 401 81 16 0 chr5_random 1557438 1557500 -1151280 + (CA)n Simple_repeat Simple_repeat 1 63 0 602 207 0 0 chr5_random 1557921 1558177 -1150603 + ACRO1 Satellite acromeric 1 256 -38 1142 114 4 1 chr5_random 1558509 1560356 -1148424 + ACRO1 Satellite acromeric 1 1852 -55 745 195 37 118 chr5_random 1561052 1561375 -1147405 - L1MB8 LINE L1 -42 6136 5840 651 90 0 0 chr5_random 1561431 1561531 -1147249 + (TTCC)n Simple_repeat Simple_repeat 4 103 0 323 200 0 0 chr5_random 1561833 1561888 -1146892 - Tigger5 DNA MER2_type -2268 55 1 1778 101 71 0 chr5_random 1562277 1562545 -1146235 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 1562545 1562574 -1146206 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 914 217 71 16 chr5_random 1562750 1563211 -1145569 - MER21B LTR ERV1 -132 799 199 234 224 132 13 chr5_random 1563463 1563539 -1145241 - MER5A DNA MER1_type -6 183 99 234 0 0 0 chr5_random 1563956 1563982 -1144798 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 437 76 15 0 chr5_random 1564025 1564091 -1144689 + (CA)n Simple_repeat Simple_repeat 1 67 0 602 213 0 0 chr5_random 1564512 1564768 -1144012 + ACRO1 Satellite acromeric 1 256 -38 1141 122 3 2 chr5_random 1565100 1566658 -1142122 + ACRO1 Satellite acromeric 1 1560 -55 692 201 43 122 chr5_random 1567348 1567677 -1141103 - L1MB8 LINE L1 -36 6142 5840 258 260 0 0 chr5_random 1567732 1567832 -1140948 + CT-rich Low_complexity Low_complexity 2 101 0 1264 140 6 0 chr5_random 1568560 1568738 -1140042 + AluSg/x SINE Alu 112 290 -20 5935 125 18 5 chr5_random 1568744 1569696 -1139084 + MER57B-int LTR ERV1 5223 6186 -1351 2224 152 35 8 chr5_random 1569690 1570086 -1138694 + MER57B-int LTR ERV1 6661 7067 -470 * 685 146 9 0 chr5_random 1571282 1571392 -1137388 + MER57B-int LTR ERV1 7032 7142 -395 2252 113 0 0 chr5_random 1571392 1571685 -1137095 - AluY SINE Alu -17 294 2 448 124 177 35 chr5_random 1571700 1571758 -1137022 + LTR54B LTR ERV1 3 51 -447 195 42 0 0 chr5_random 1571758 1571782 -1136998 + (CAAAC)n Simple_repeat Simple_repeat 1 24 0 448 124 177 35 chr5_random 1571782 1571836 -1136944 + LTR54B LTR ERV1 51 131 -367 1300 131 131 0 chr5_random 1571836 1572065 -1136715 + MER57B-int LTR ERV1 7279 7537 0 2252 145 90 2 chr5_random 1572065 1572464 -1136316 + MER57B LTR ERV1 1 434 0 262 159 0 0 chr5_random 1572505 1572549 -1136231 + LTR6A LTR ERV1 1 44 -520 3512 121 5 11 chr5_random 1572556 1573112 -1135668 + LTR6A LTR ERV1 12 564 0 22 35 0 0 chr5_random 1574218 1574247 -1134533 + AT_rich Low_complexity Low_complexity 1 29 0 307 245 33 59 chr5_random 1574732 1574980 -1133800 + MLT1H LTR MaLR 311 549 0 269 348 70 16 chr5_random 1576389 1576576 -1132204 + LTR40a LTR ERVL 131 327 -192 2672 235 19 14 chr5_random 1576587 1577374 -1131406 - L1 LINE L1 -1296 4850 4060 1793 70 0 2 chr5_random 1577379 1577663 -1131117 + LTR14A LTR ERVK 1 344 0 604 119 20 0 chr5_random 1577663 1577764 -1131016 + HERVK14 LTR ERVK 1 103 -5842 * 6256 93 6 0 chr5_random 1577758 1578652 -1130128 + HERVK14 LTR ERVK 205 1103 -4842 2493 71 0 3 chr5_random 1581054 1581387 -1127393 - AluSg SINE Alu 0 332 1 857 235 41 24 chr5_random 1582004 1582344 -1126436 + MER66A LTR ERV1 93 438 -40 1550 195 127 8 chr5_random 1582568 1583044 -1125736 + SATR1 Satellite Satellite 1 532 -105 32 26 0 0 chr5_random 1583210 1583249 -1125531 + AT_rich Low_complexity Low_complexity 1 39 0 2141 165 122 12 chr5_random 1585969 1586025 -1122755 - SATR1 Satellite Satellite 0 2370 2322 2389 73 7 0 chr5_random 1586025 1586326 -1122454 - AluY SINE Alu -8 303 1 2141 165 122 12 chr5_random 1586326 1588105 -1120675 - SATR1 Satellite Satellite -48 2322 1 1259 193 30 58 chr5_random 1588119 1588520 -1120260 + MLT2B3 LTR ERVL 176 554 0 36 23 0 0 chr5_random 1589401 1589444 -1119336 + AT_rich Low_complexity Low_complexity 1 43 0 241 128 51 64 chr5_random 1589489 1589567 -1119213 - AluJb SINE Alu -185 117 41 23 0 0 0 chr5_random 1589882 1589905 -1118875 + AT_rich Low_complexity Low_complexity 1 23 0 973 154 127 50 chr5_random 1590060 1590359 -1118421 + MER33 DNA MER1_type 1 322 -2 947 130 31 0 chr5_random 1592275 1592436 -1116344 - MER68 LTR ERV1 -396 166 1 26 30 0 0 chr5_random 1592835 1592868 -1115912 + AT_rich Low_complexity Low_complexity 1 33 0 2077 148 3 6 chr5_random 1592987 1593298 -1115482 - AluSq SINE Alu -3 310 1 23 0 0 0 chr5_random 1593301 1593324 -1115456 + AT_rich Low_complexity Low_complexity 1 23 0 2116 139 0 0 chr5_random 1593364 1593659 -1115121 - AluSx SINE Alu -17 295 1 2323 157 2 35 chr5_random 1593677 1594105 -1114675 - L1MC1 LINE L1 -6 6327 5914 640 164 49 0 chr5_random 1595142 1595264 -1113516 - Tigger7 DNA MER2_type -12 2475 2348 629 143 52 39 chr5_random 1595270 1595424 -1113356 + MER21A LTR ERV1 747 902 -29 613 211 0 41 chr5_random 1595865 1595988 -1112792 - FLAM_A SINE Alu -19 123 6 211 378 81 14 chr5_random 1596144 1596366 -1112414 - MIR SINE MIR -6 256 20 245 299 149 9 chr5_random 1596972 1597079 -1111701 - MIR SINE MIR -121 141 20 544 214 10 0 chr5_random 1599430 1599528 -1109252 + FLAM_A SINE Alu 1 99 -43 1782 141 0 62 chr5_random 1599806 1600119 -1108661 + AluSx SINE Alu 12 306 0 1121 234 30 54 chr5_random 1600290 1600585 -1108195 - AluJb SINE Alu -12 300 13 2180 55 3 14 chr5_random 1600957 1601246 -1107534 - L1PA5 LINE L1 -1 6153 5868 1180 139 39 28 chr5_random 1601346 1602371 -1106409 - GSATII Satellite centromeric -8 1035 1 545 232 0 0 chr5_random 1602672 1602771 -1106009 + FLAM_A SINE Alu 1 99 -43 1870 143 7 41 chr5_random 1603024 1603340 -1105440 + AluSx SINE Alu 1 306 0 1132 231 30 54 chr5_random 1603511 1603806 -1104974 - AluJb SINE Alu -12 300 13 5725 60 1 0 chr5_random 1604193 1604941 -1103839 - L1PA5 LINE L1 -30 6124 5376 1563 201 0 11 chr5_random 1605326 1605609 -1103171 - AluJb SINE Alu -30 282 3 1367 236 0 24 chr5_random 1605643 1605939 -1102841 + AluJo SINE Alu 1 289 -23 2317 89 0 0 chr5_random 1606134 1606427 -1102353 + AluY SINE Alu 1 293 -18 257 171 195 12 chr5_random 1607241 1607323 -1101457 - MER5A DNA MER1_type -83 106 10 1901 159 0 0 chr5_random 1610524 1610826 -1097954 - AluSx SINE Alu -4 308 7 2056 127 10 0 chr5_random 1612599 1612890 -1095890 + AluSp SINE Alu 2 295 -18 1971 152 7 0 chr5_random 1613364 1613661 -1095119 + AluSx SINE Alu 5 303 -9 206 225 0 0 chr5_random 1613943 1613983 -1094797 + L2 LINE L2 3262 3301 -12 1349 255 31 3 chr5_random 1614202 1614496 -1094284 - AluJo SINE Alu -10 302 1 577 82 24 0 chr5_random 1617226 1617311 -1091469 + L1PA5 LINE L1 6066 6152 -2 30 59 0 0 chr5_random 1619077 1619128 -1089652 + AT_rich Low_complexity Low_complexity 1 51 0 2053 142 0 3 chr5_random 1619313 1619616 -1089164 - AluSq SINE Alu -11 302 1 432 275 55 25 chr5_random 1619735 1619961 -1088819 + L1MB7 LINE L1 5401 5643 -478 655 264 35 5 chr5_random 1623050 1623251 -1085529 + L1MB7 LINE L1 5903 6109 -75 424 325 51 13 chr5_random 1624165 1624322 -1084458 - L2 LINE L2 -430 2884 2722 23 33 0 0 chr5_random 1624535 1624565 -1084215 + AT_rich Low_complexity Low_complexity 1 30 0 1504 220 78 44 chr5_random 1625399 1625899 -1082881 - L1MB8 LINE L1 -9 6169 5653 188 250 50 0 chr5_random 1626911 1626971 -1081809 - MIR SINE MIR -2 260 198 1385 181 0 41 chr5_random 1626994 1627260 -1081520 + AluJb SINE Alu 38 292 -20 2155 139 7 0 chr5_random 1627679 1627989 -1080791 + AluSx SINE Alu 1 312 0 659 128 11 0 chr5_random 1628340 1628434 -1080346 + AluSg SINE Alu 3 97 -213 2753 121 26 7 chr5_random 1628435 1628889 -1079891 - L1PA10 LINE L1 -51 6117 5655 1033 236 94 22 chr5_random 1628984 1629345 -1079435 - MER4E LTR ERV1 -391 388 2 1112 211 68 12 chr5_random 1629566 1629889 -1078891 - L1MB8 LINE L1 -5 6173 5833 1799 143 96 5 chr5_random 1629900 1630294 -1078486 - MER61C LTR ERV1 -10 424 11 2170 194 51 44 chr5_random 1630303 1631353 -1077427 - L1MB8 LINE L1 -342 5836 4776 541 303 99 17 chr5_random 1632698 1633075 -1075705 - MLT1G1 LTR MaLR -34 561 79 1333 167 65 0 chr5_random 1633111 1633387 -1075393 - L1MA5 LINE L1 -6 6294 6001 1075 247 27 8 chr5_random 1633452 1633711 -1075069 - AluJo SINE Alu -48 264 1 2687 221 36 17 chr5_random 1633712 1634811 -1073969 - L1MA5 LINE L1 -354 5946 4828 1400 186 39 29 chr5_random 1635097 1635377 -1073403 - AluJo SINE Alu -24 288 6 306 0 0 0 chr5_random 1636187 1636221 -1072559 + (TA)n Simple_repeat Simple_repeat 1 34 0 243 0 0 0 chr5_random 1636220 1636247 -1072533 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 335 256 0 0 chr5_random 1637843 1637933 -1070847 - L1MA9 LINE L1 -49 6263 6174 2023 154 0 0 chr5_random 1639135 1639433 -1069347 - AluSg SINE Alu -12 298 1 1898 159 17 0 chr5_random 1639879 1640174 -1068606 + AluSx SINE Alu 1 300 -12 3904 188 29 26 chr5_random 1640210 1641348 -1067432 + L1PA16 LINE L1 5026 6165 -1 1974 143 0 0 chr5_random 1641519 1641799 -1066981 - AluSc SINE Alu -29 280 1 21 0 0 0 chr5_random 1642161 1642182 -1066598 + AT_rich Low_complexity Low_complexity 1 21 0 244 288 163 58 chr5_random 1642614 1642945 -1065835 + L2 LINE L2 2745 3106 -166 838 193 41 5 chr5_random 1643762 1643980 -1064800 - L1MC4 LINE L1 -680 7362 7137 742 243 22 0 chr5_random 1644022 1644203 -1064577 - L1MC4 LINE L1 -1039 7003 6819 250 208 0 77 chr5_random 1644804 1644915 -1063865 - HSAT5 Satellite Satellite -1 102 1 243 247 12 12 chr5_random 1645214 1645299 -1063481 - HSAT5 Satellite Satellite -1 85 1 239 200 0 14 chr5_random 1645737 1645807 -1062973 + (CA)n Simple_repeat Simple_repeat 2 70 0 1826 97 60 47 chr5_random 1646094 1646476 -1062304 - SN5 Other centromeric -68 387 1 1470 219 52 3 chr5_random 1647520 1647863 -1060917 + MSTA LTR MaLR 9 368 -60 1229 171 17 0 chr5_random 1647892 1648126 -1060654 + MSTA-int LTR MaLR 13 250 -1401 * 1246 171 8 12 chr5_random 1648123 1648375 -1060405 + MSTA-int LTR MaLR 1401 1651 0 895 247 4 32 chr5_random 1648375 1648622 -1060158 + MSTA LTR MaLR 1 240 -188 341 193 0 12 chr5_random 1648994 1649093 -1059687 - HSAT5 Satellite Satellite -3 97 1 605 113 0 32 chr5_random 1649254 1649439 -1059341 - HSAT5 Satellite Satellite 0 179 1 698 103 1 10 chr5_random 1649901 1651366 -1057414 + CER Satellite Satellite 1 1451 -6 673 219 7 0 chr5_random 1651357 1651494 -1057286 + MLT1A1 LTR MaLR 226 363 -2 * 3144 191 104 76 chr5_random 1651496 1652938 -1055842 + L1MCa LINE L1 723 2205 -4221 258 146 52 52 chr5_random 1652937 1653033 -1055747 + L1MCa LINE L1 2104 2199 -4227 * 1446 163 55 22 chr5_random 1653037 1653399 -1055381 + L1MCa LINE L1 2104 2477 -3949 11018 155 55 40 chr5_random 1653410 1654120 -1054660 + Tigger1 DNA MER2_type 1 699 -1719 2286 96 0 19 chr5_random 1654120 1654434 -1054346 - AluSp SINE Alu -5 308 1 11018 155 55 40 chr5_random 1654434 1655291 -1053489 + Tigger1 DNA MER2_type 699 1542 -876 1856 132 38 10 chr5_random 1655291 1655580 -1053200 + AluSg SINE Alu 1 297 -13 11018 155 55 40 chr5_random 1655580 1656170 -1052610 + Tigger1 DNA MER2_type 1542 2201 -217 1193 198 123 22 chr5_random 1656170 1656438 -1052342 + AluJo SINE Alu 1 295 -7 11018 155 55 40 chr5_random 1656438 1656656 -1052124 + Tigger1 DNA MER2_type 2201 2414 -4 2379 89 0 0 chr5_random 1656723 1657016 -1051764 - AluY SINE Alu -18 293 1 438 20 0 0 chr5_random 1657204 1657255 -1051525 + (CA)n Simple_repeat Simple_repeat 2 52 0 2098 109 11 0 chr5_random 1657304 1657603 -1051177 - AluY SINE Alu 0 304 3 2164 133 0 0 chr5_random 1657607 1657901 -1050879 - AluSx SINE Alu -17 295 2 38 0 0 0 chr5_random 1657901 1657939 -1050841 + AT_rich Low_complexity Low_complexity 1 38 0 2125 110 6 41 chr5_random 1658062 1658379 -1050401 - AluSx SINE Alu -6 306 1 351 240 24 8 chr5_random 1658512 1658637 -1050143 + L1MCa LINE L1 3200 3326 -3100 1473 261 45 12 chr5_random 1658637 1659311 -1049469 + L1MCa LINE L1 3263 3958 -2468 * 3145 231 53 65 chr5_random 1659306 1659734 -1049046 + L1MCa LINE L1 4215 4647 -1779 1876 164 0 50 chr5_random 1659734 1660057 -1048723 + AluSx SINE Alu 1 307 -5 3145 231 53 65 chr5_random 1660057 1660128 -1048652 + L1MCa LINE L1 4647 4717 -1709 2061 131 0 7 chr5_random 1660128 1660426 -1048354 + AluSx SINE Alu 1 296 -16 3145 231 53 65 chr5_random 1660426 1661230 -1047550 + L1MCa LINE L1 4717 5504 -922 1119 163 110 0 chr5_random 1661230 1661439 -1047341 - MER46A DNA MER2_type -3 233 2 3145 231 53 65 chr5_random 1661439 1661496 -1047284 + L1MCa LINE L1 5504 5560 -866 2112 187 172 52 chr5_random 1662526 1663316 -1045464 + L1MB2 LINE L1 5285 6169 -2 22 0 0 0 chr5_random 1663316 1663338 -1045442 + AT_rich Low_complexity Low_complexity 1 22 0 1599 190 7 14 chr5_random 1663342 1663632 -1045148 - AluJb SINE Alu -24 288 1 430 196 9 54 chr5_random 1663744 1663856 -1044924 + FLAM_C SINE Alu 1 107 -36 1018 239 130 56 chr5_random 1663980 1664743 -1044037 + L1M4 LINE L1 2116 2934 -3212 282 285 159 58 chr5_random 1664769 1665046 -1043734 + MLT1H1 LTR MaLR 3 307 -248 293 67 0 22 chr5_random 1665684 1665729 -1043051 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 749 269 128 37 chr5_random 1666333 1666840 -1041940 + MLT1H1 LTR MaLR 1 589 -1 2219 110 7 7 chr5_random 1667565 1667874 -1040906 + AluSq SINE Alu 1 309 -4 2319 126 15 105 chr5_random 1668270 1668747 -1040033 + MER57B LTR ERV1 1 434 0 1207 244 200 11 chr5_random 1668887 1669404 -1039376 + MER52A LTR ERV1 1 658 -1097 4173 165 34 18 chr5_random 1669426 1670150 -1038630 + MER52A LTR ERV1 977 1755 0 4068 139 37 35 chr5_random 1670150 1671064 -1037716 + MER52A-int LTR ERV1 88 1004 -4942 2030 125 3 3 chr5_random 1671088 1671385 -1037395 + AluSp SINE Alu 1 297 -16 317 138 116 15 chr5_random 1671387 1671478 -1037302 + MER57-int LTR ERV1 3680 4468 -2147 43716 48 3 2 chr5_random 1671478 1677624 -1031156 + L1PA2 LINE L1 1 6154 -1 3267 125 89 3 chr5_random 1677635 1677968 -1030812 + MER57-int LTR ERV1 4584 4887 -2650 2225 100 7 0 chr5_random 1677968 1678258 -1030522 - AluY SINE Alu -15 296 5 3267 125 89 3 chr5_random 1678258 1678507 -1030273 + MER57-int LTR ERV1 4887 5216 -2321 723 228 72 8 chr5_random 1678566 1678803 -1029977 + AluSq SINE Alu 2 253 -60 22 35 0 0 chr5_random 1678831 1678860 -1029920 + AT_rich Low_complexity Low_complexity 1 29 0 328 164 0 0 chr5_random 1679024 1679091 -1029689 + AluSq SINE Alu 237 303 0 2928 243 9 1 chr5_random 1679095 1679832 -1028948 + L1 LINE L1 4477 5219 -927 552 99 6 66 chr5_random 1679833 1680014 -1028766 + (CCCTAA)n Simple_repeat Simple_repeat 1 170 0 272 143 0 48 chr5_random 1680053 1680137 -1028643 + (CCCTAA)n Simple_repeat Simple_repeat 4 83 0 3442 164 8 8 chr5_random 1680277 1680913 -1027867 - TAR1 Satellite telomeric -43 2068 1433 1307 135 65 14 chr5_random 1680903 1681549 -1027231 + GSATII Satellite centromeric 1 678 -56 * 345 62 0 0 chr5_random 1681664 1681712 -1027068 + (GAATG)n Satellite Satellite 2 49 0 1197 90 0 0 chr5_random 1681735 1681912 -1026868 + (GAATG)n Satellite Satellite 2 178 0 1176 106 0 13 chr5_random 1681924 1682288 -1026492 + (GAATG)n Satellite Satellite 2 537 0 1017 122 0 0 chr5_random 1682316 1682727 -1026053 + (GAATG)n Satellite Satellite 1 411 0 1080 120 1 21 chr5_random 1682744 1683302 -1025478 + (GAATG)n Satellite Satellite 2 718 0 1002 132 0 4 chr5_random 1683315 1683659 -1025121 + (GAATG)n Satellite Satellite 2 519 0 811 111 0 53 chr5_random 1683682 1683872 -1024908 + (GAATG)n Satellite Satellite 1 180 0 1137 118 2 22 chr5_random 1683893 1684340 -1024440 + (GAATG)n Satellite Satellite 1 438 0 948 131 0 0 chr5_random 1684367 1684542 -1024238 + (GAATG)n Satellite Satellite 5 179 0 417 116 0 0 chr5_random 1684556 1684625 -1024155 + (GAATG)n Satellite Satellite 2 70 0 5942 214 16 37 chr5_random 1684752 1686349 -1022431 - L1 LINE L1 -1710 4436 2873 573 230 26 26 chr5_random 1686340 1686492 -1022288 - L1M3 LINE L1 -587 5593 5442 * 253 258 0 15 chr5_random 1686479 1686545 -1022235 - L1MA8 LINE L1 -75 6216 6152 * 6055 234 63 24 chr5_random 1687681 1690098 -1018682 - L1M3 LINE L1 -570 5610 3095 518 238 0 0 chr5_random 1690642 1690743 -1018037 - AluJ/FLAM SINE Alu -210 102 2 1500 195 30 18 chr5_random 1690751 1691090 -1017690 - L1M3 LINE L1 -361 5822 5480 894 152 11 73 chr5_random 1691251 1691429 -1017351 + AluSq SINE Alu 1 167 -146 1400 134 62 10 chr5_random 1691529 1691809 -1016971 + GSATII Satellite centromeric 1 265 -1913 450 0 0 0 chr5_random 1691809 1691859 -1016921 + (TA)n Simple_repeat Simple_repeat 2 51 0 1400 134 62 10 chr5_random 1691859 1693540 -1015240 + GSATII Satellite centromeric 265 2114 -64 344 167 60 107 chr5_random 1693553 1693703 -1015077 + L1MB8 LINE L1 6000 6142 -36 1085 124 3 0 chr5_random 1694393 1695803 -1012977 - ACRO1 Satellite acromeric 0 1413 1 616 208 0 0 chr5_random 1696136 1696392 -1012388 - ACRO1 Satellite acromeric 0 256 1 1866 82 74 0 chr5_random 1696783 1697053 -1011727 + L1PA10 LINE L1 5860 6149 -19 186 103 0 0 chr5_random 1697053 1697082 -1011698 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 1597 223 161 7 chr5_random 1697259 1697720 -1011060 - MER21B LTR ERV1 -133 730 199 219 224 118 0 chr5_random 1697972 1698048 -1010732 - MER5A DNA MER1_type -6 183 99 243 0 0 0 chr5_random 1698465 1698492 -1010288 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 1035 148 0 7 chr5_random 1698669 1698818 -1009962 + AluSg/x SINE Alu 144 291 -21 6435 125 17 5 chr5_random 1698818 1699779 -1009001 + MER57B-int LTR ERV1 5217 6188 -1349 2417 154 33 5 chr5_random 1699771 1700167 -1008613 + MER57B-int LTR ERV1 6661 7067 -470 * 692 154 9 0 chr5_random 1701012 1701122 -1007658 + MER57B-int LTR ERV1 7032 7142 -395 2249 110 0 0 chr5_random 1701123 1701415 -1007365 - AluY SINE Alu -19 292 1 768 108 23 31 chr5_random 1701430 1701560 -1007220 + LTR54B LTR ERV1 3 131 -367 1386 135 131 0 chr5_random 1701560 1701789 -1006991 + MER57B-int LTR ERV1 7279 7537 0 2246 153 90 2 chr5_random 1701789 1702188 -1006592 + MER57B LTR ERV1 1 434 0 228 150 75 0 chr5_random 1702229 1702269 -1006511 + LTR6A LTR ERV1 1 43 -521 3859 114 7 11 chr5_random 1702269 1702832 -1005948 + LTR6A LTR ERV1 4 564 0 296 272 31 53 chr5_random 1704427 1704658 -1004122 + MLT1H LTR MaLR 325 549 0 2336 97 0 0 chr5_random 1706216 1706537 -1002243 - AluSg SINE Alu 0 310 1 254 226 60 60 chr5_random 1706650 1706734 -1002046 - LTR45B LTR ERV1 0 489 406 2287 87 0 20 chr5_random 1706759 1707057 -1001723 + AluY SINE Alu 1 292 -19 1628 193 21 50 chr5_random 1707058 1707483 -1001297 + L1 LINE L1 2968 3445 -2701 2011 141 14 0 chr5_random 1707483 1707773 -1001007 + AluSx SINE Alu 1 294 -18 1628 193 21 50 chr5_random 1707773 1707964 -1000816 + L1 LINE L1 3445 3640 -2506 4092 183 11 23 chr5_random 1707965 1708865 -999915 + L1 LINE L1 3776 4664 -1482 1020 79 0 0 chr5_random 1708865 1709017 -999763 + (GAATG)n Satellite Satellite 4 155 0 960 133 0 0 chr5_random 1709030 1709210 -999570 + (GAATG)n Satellite Satellite 1 180 0 939 146 3 7 chr5_random 1709235 1709531 -999249 + (GAATG)n Satellite Satellite 1 471 0 914 130 6 0 chr5_random 1709531 1709708 -999072 + (GAATG)n Satellite Satellite 2 179 0 462 91 0 0 chr5_random 1709720 1709797 -998983 + (TAATG)n Simple_repeat Simple_repeat 3 79 0 1059 129 2 6 chr5_random 1709874 1711016 -997764 + (GAATG)n Satellite Satellite 1 1315 0 1176 118 0 3 chr5_random 1711029 1711493 -997287 + (GAATG)n Satellite Satellite 2 641 0 776 149 6 0 chr5_random 1711512 1711686 -997094 + (GAATG)n Satellite Satellite 3 177 0 1020 98 10 3 chr5_random 1711713 1712005 -996775 + (GAATG)n Satellite Satellite 1 294 0 318 26 0 0 chr5_random 1712017 1712056 -996724 + (TAATG)n Simple_repeat Simple_repeat 1 39 0 1179 84 0 0 chr5_random 1712057 1712235 -996545 + (GAATG)n Satellite Satellite 2 179 0 1176 111 1 1 chr5_random 1712266 1712858 -995922 + (GAATG)n Satellite Satellite 1 771 0 1172 98 5 2 chr5_random 1712870 1713267 -995513 + (GAATG)n Satellite Satellite 1 578 0 1080 106 0 0 chr5_random 1713278 1713492 -995288 + (GAATG)n Satellite Satellite 1 214 0 918 140 0 0 chr5_random 1713503 1713682 -995098 + (GAATG)n Satellite Satellite 2 180 0 1143 119 0 1 chr5_random 1713693 1714221 -994559 + (GAATG)n Satellite Satellite 1 706 0 1011 109 0 0 chr5_random 1714233 1714398 -994382 + (GAATG)n Satellite Satellite 1 165 0 1134 126 0 0 chr5_random 1714411 1714762 -994018 + (GAATG)n Satellite Satellite 1 351 0 891 141 0 13 chr5_random 1714774 1715081 -993699 + (GAATG)n Satellite Satellite 3 698 0 891 134 0 0 chr5_random 1715081 1715312 -993468 + (GAATG)n Satellite Satellite 1 231 0 984 124 0 0 chr5_random 1715339 1715517 -993263 + (GAATG)n Satellite Satellite 2 179 0 861 150 0 0 chr5_random 1715538 1715718 -993062 + (GAATG)n Satellite Satellite 1 180 0 1002 134 2 2 chr5_random 1715738 1716169 -992611 + (GAATG)n Satellite Satellite 1 611 0 1197 101 0 11 chr5_random 1716182 1716545 -992235 + (GAATG)n Satellite Satellite 1 536 0 192 111 0 0 chr5_random 1716560 1716596 -992184 + (GAATG)n Satellite Satellite 2 37 0 1019 131 4 10 chr5_random 1716607 1717089 -991691 + (GAATG)n Satellite Satellite 1 479 0 1094 90 6 0 chr5_random 1717110 1717288 -991492 + (GAATG)n Satellite Satellite 2 180 0 1320 67 0 0 chr5_random 1717299 1717479 -991301 + (GAATG)n Satellite Satellite 1 180 0 881 131 4 0 chr5_random 1717500 1717727 -991053 + (GAATG)n Satellite Satellite 1 228 0 1212 114 4 11 chr5_random 1717739 1718220 -990560 + (GAATG)n Satellite Satellite 1 656 0 1003 111 6 6 chr5_random 1718220 1718400 -990380 + (GAATG)n Satellite Satellite 1 180 0 1212 75 0 0 chr5_random 1718560 1718733 -990047 + (GAATG)n Satellite Satellite 3 175 0 918 140 0 0 chr5_random 1718795 1718974 -989806 + (GAATG)n Satellite Satellite 2 180 0 972 138 4 2 chr5_random 1719016 1719371 -989409 + (GAATG)n Satellite Satellite 1 535 0 939 132 0 0 chr5_random 1719392 1719566 -989214 + (GAATG)n Satellite Satellite 2 175 0 1026 122 0 0 chr5_random 1719597 1719777 -989003 + (GAATG)n Satellite Satellite 1 180 0 1092 120 0 10 chr5_random 1719797 1720341 -988439 + (GAATG)n Satellite Satellite 1 716 0 1038 101 0 0 chr5_random 1720368 1720591 -988189 + (GAATG)n Satellite Satellite 1 223 0 794 151 3 0 chr5_random 1720613 1720925 -987855 + (GAATG)n Satellite Satellite 1 313 0 1047 115 0 0 chr5_random 1720946 1721175 -987605 + (GAATG)n Satellite Satellite 1 229 0 1014 111 0 26 chr5_random 1721211 1721586 -987194 + (GAATG)n Satellite Satellite 1 365 0 753 149 0 0 chr5_random 1721599 1721760 -987020 + (GAATG)n Satellite Satellite 2 162 0 183 42 0 0 chr5_random 1721780 1721804 -986976 + (GAATG)n Satellite Satellite 3 26 0 1232 113 1 0 chr5_random 1721831 1722678 -986102 + (GAATG)n Satellite Satellite 1 848 0 192 111 0 0 chr5_random 1722693 1722729 -986051 + (GAATG)n Satellite Satellite 2 37 0 1212 123 1 4 chr5_random 1722740 1723190 -985590 + (GAATG)n Satellite Satellite 1 621 0 1092 103 0 0 chr5_random 1723190 1723364 -985416 + (GAATG)n Satellite Satellite 2 175 0 1017 128 0 0 chr5_random 1723400 1723580 -985200 + (GAATG)n Satellite Satellite 1 180 0 234 143 0 0 chr5_random 1723830 1723879 -984901 + (GAATG)n Satellite Satellite 2 50 0 1104 59 0 0 chr5_random 1723891 1724044 -984736 + (GAATG)n Satellite Satellite 2 154 0 1122 100 0 0 chr5_random 1724060 1724240 -984540 + (GAATG)n Satellite Satellite 1 180 0 1164 107 0 0 chr5_random 1724260 1724503 -984277 + (GAATG)n Satellite Satellite 1 243 0 840 153 0 0 chr5_random 1724515 1724685 -984095 + (GAATG)n Satellite Satellite 1 170 0 1113 106 0 0 chr5_random 1724842 1725022 -983758 + (GAATG)n Satellite Satellite 1 180 0 237 83 0 0 chr5_random 1725040 1725076 -983704 + (GAATG)n Satellite Satellite 2 37 0 905 120 0 27 chr5_random 1725087 1725271 -983509 + (GAATG)n Satellite Satellite 2 180 0 972 138 4 2 chr5_random 1725313 1725668 -983112 + (GAATG)n Satellite Satellite 1 535 0 1005 123 0 0 chr5_random 1725690 1725869 -982911 + (GAATG)n Satellite Satellite 2 180 0 1092 131 0 0 chr5_random 1725886 1726294 -982486 + (GAATG)n Satellite Satellite 1 408 0 936 155 0 0 chr5_random 1726305 1726653 -982127 + (GAATG)n Satellite Satellite 1 348 0 966 113 0 0 chr5_random 1726665 1726825 -981955 + (GAATG)n Satellite Satellite 1 160 0 1038 149 0 0 chr5_random 1726840 1727739 -981041 + (GAATG)n Satellite Satellite 1 899 0 984 124 0 0 chr5_random 1727766 1727944 -980836 + (GAATG)n Satellite Satellite 2 179 0 893 120 0 27 chr5_random 1727965 1728149 -980631 + (GAATG)n Satellite Satellite 2 180 0 1002 136 2 2 chr5_random 1728165 1728596 -980184 + (GAATG)n Satellite Satellite 1 611 0 1161 96 0 27 chr5_random 1728609 1729073 -979707 + (GAATG)n Satellite Satellite 3 624 0 1053 122 0 0 chr5_random 1729090 1729488 -979292 + (GAATG)n Satellite Satellite 1 398 0 908 128 6 0 chr5_random 1729499 1729678 -979102 + (GAATG)n Satellite Satellite 1 180 0 504 160 0 0 chr5_random 1729693 1729812 -978968 + (GAATG)n Satellite Satellite 2 120 0 1290 53 0 0 chr5_random 1729824 1729995 -978785 + (GAATG)n Satellite Satellite 4 174 0 915 139 0 0 chr5_random 1730023 1730203 -978577 + (GAATG)n Satellite Satellite 1 180 0 399 113 0 0 chr5_random 1730226 1730297 -978483 + (GAATG)n Satellite Satellite 2 72 0 897 140 0 0 chr5_random 1730308 1730486 -978294 + (GAATG)n Satellite Satellite 3 180 0 1149 113 0 8 chr5_random 1730510 1730845 -977935 + (GAATG)n Satellite Satellite 3 507 0 1080 106 0 0 chr5_random 1730887 1731066 -977714 + (GAATG)n Satellite Satellite 2 180 0 790 136 3 16 chr5_random 1731088 1731405 -977375 + (GAATG)n Satellite Satellite 1 312 0 1143 127 0 2 chr5_random 1731426 1731951 -976829 + (GAATG)n Satellite Satellite 1 703 0 1143 94 0 0 chr5_random 1731951 1732131 -976649 + (GAATG)n Satellite Satellite 1 180 0 1056 106 0 0 chr5_random 1732211 1732381 -976399 + (GAATG)n Satellite Satellite 1 170 0 1071 142 0 0 chr5_random 1732401 1732730 -976050 + (GAATG)n Satellite Satellite 1 329 0 798 170 0 0 chr5_random 1732742 1732980 -975800 + (GAATG)n Satellite Satellite 1 238 0 905 124 0 27 chr5_random 1733006 1733191 -975589 + (GAATG)n Satellite Satellite 1 180 0 279 130 0 0 chr5_random 1733216 1733270 -975510 + (GAATG)n Satellite Satellite 2 55 0 984 124 0 0 chr5_random 1733297 1733475 -975305 + (GAATG)n Satellite Satellite 2 179 0 1026 126 1 9 chr5_random 1733496 1733974 -974806 + (GAATG)n Satellite Satellite 1 653 0 1266 119 0 0 chr5_random 1733985 1734523 -974257 + (GAATG)n Satellite Satellite 1 538 0 192 111 0 0 chr5_random 1734538 1734574 -974206 + (GAATG)n Satellite Satellite 2 37 0 809 141 0 27 chr5_random 1734585 1734769 -974011 + (GAATG)n Satellite Satellite 2 180 0 827 103 7 0 chr5_random 1734811 1734957 -973823 + (GAATG)n Satellite Satellite 3 149 0 1049 112 4 0 chr5_random 1734969 1735212 -973568 + (GAATG)n Satellite Satellite 1 244 0 1278 73 0 0 chr5_random 1735238 1735417 -973363 + (GAATG)n Satellite Satellite 1 179 0 905 120 0 27 chr5_random 1735447 1735631 -973149 + (GAATG)n Satellite Satellite 2 180 0 1106 110 5 16 chr5_random 1735673 1736153 -972627 + (GAATG)n Satellite Satellite 1 651 0 1326 103 0 0 chr5_random 1736165 1736696 -972084 + (GAATG)n Satellite Satellite 1 531 0 200 40 0 0 chr5_random 1736700 1736725 -972055 + (TAATG)n Simple_repeat Simple_repeat 5 29 0 851 133 4 21 chr5_random 1736725 1736965 -971815 + (GAATG)n Satellite Satellite 1 236 0 1170 104 2 2 chr5_random 1737069 1737556 -971224 + (CATTC)n Satellite Satellite 1 487 0 234 143 0 0 chr5_random 1737577 1737626 -971154 + (CATTC)n Satellite Satellite 2 50 0 723 174 0 0 chr5_random 1737638 1737816 -970964 + (CATTC)n Satellite Satellite 3 180 0 1053 131 0 2 chr5_random 1737827 1738338 -970442 + (CATTC)n Satellite Satellite 1 509 0 1173 117 0 14 chr5_random 1738353 1738693 -970087 + (CATTC)n Satellite Satellite 3 336 0 897 140 0 0 chr5_random 1738718 1738896 -969884 + (CATTC)n Satellite Satellite 3 180 0 399 113 0 0 chr5_random 1738907 1738978 -969802 + (CATTC)n Satellite Satellite 2 72 0 1164 119 0 0 chr5_random 1738991 1739351 -969429 + (CATTC)n Satellite Satellite 1 360 0 300 111 0 0 chr5_random 1739372 1739426 -969354 + (CATTC)n Satellite Satellite 2 55 0 1551 233 52 3 chr5_random 1739948 1740291 -968489 + MSTA LTR MaLR 9 368 -60 1375 176 0 0 chr5_random 1740320 1740558 -968222 + MSTA-int LTR MaLR 13 250 -1401 * 1407 163 8 12 chr5_random 1740555 1740807 -967973 + MSTA-int LTR MaLR 1401 1651 0 982 261 7 39 chr5_random 1740807 1741090 -967690 + MSTA LTR MaLR 1 274 -154 241 229 24 35 chr5_random 1741096 1741197 -967583 - HSAT5 Satellite Satellite -1 99 1 349 205 0 12 chr5_random 1741426 1741525 -967255 - HSAT5 Satellite Satellite -3 97 1 619 112 0 32 chr5_random 1741686 1741872 -966908 - HSAT5 Satellite Satellite 0 180 1 259 163 10 163 chr5_random 1741890 1741988 -966792 - HSAT5 Satellite Satellite -3 83 1 763 108 3 3 chr5_random 1742334 1747127 -961653 + CER Satellite Satellite 1 4791 -6 753 206 15 0 chr5_random 1747118 1747254 -961526 + MLT1A1 LTR MaLR 226 363 -2 * 3854 180 106 82 chr5_random 1747256 1748703 -960077 + L1MCa LINE L1 723 2205 -4221 298 146 52 52 chr5_random 1748702 1748798 -959982 + L1MCa LINE L1 2104 2199 -4227 * 1629 166 51 19 chr5_random 1748802 1749175 -959605 + L1MCa LINE L1 2104 2488 -3938 10821 194 47 68 chr5_random 1749175 1750841 -957939 + Tigger1 DNA MER2_type 1 1700 -718 1816 129 31 14 chr5_random 1750841 1751128 -957652 + AluSg SINE Alu 1 292 -18 10821 194 47 68 chr5_random 1751128 1751710 -957070 + Tigger1 DNA MER2_type 1700 2195 -223 1242 181 124 11 chr5_random 1751710 1751975 -956805 + AluJb SINE Alu 1 295 -17 10821 194 47 68 chr5_random 1751975 1752195 -956585 + Tigger1 DNA MER2_type 2195 2418 0 260 164 0 18 chr5_random 1752197 1752252 -956528 + L1MB1 LINE L1 6100 6153 -15 1812 86 0 0 chr5_random 1752258 1752480 -956300 - AluY SINE Alu -22 289 68 2044 118 10 38 chr5_random 1752674 1752988 -955792 - AluSx SINE Alu -7 305 1 383 242 31 8 chr5_random 1753119 1753247 -955533 + L1MCa LINE L1 3200 3330 -3096 238 227 30 0 chr5_random 1753243 1753309 -955471 + L1MCa LINE L1 3263 3330 -3096 * 261 212 30 0 chr5_random 1753305 1753371 -955409 + L1MCa LINE L1 3263 3330 -3096 3727 240 96 55 chr5_random 1753377 1754463 -954317 + L1MCa LINE L1 3274 4313 -2113 1838 164 0 49 chr5_random 1754463 1754787 -953993 + AluSx SINE Alu 1 308 -4 3727 240 96 55 chr5_random 1754787 1754848 -953932 + L1MCa LINE L1 4313 4370 -2056 1958 143 0 7 chr5_random 1754848 1755142 -953638 + AluSx SINE Alu 1 292 -20 3727 240 96 55 chr5_random 1755142 1755947 -952833 + L1MCa LINE L1 4370 5507 -919 1220 168 110 0 chr5_random 1755947 1756156 -952624 - MER46A DNA MER2_type -3 233 2 3727 240 96 55 chr5_random 1756156 1756218 -952562 + L1MCa LINE L1 5507 5565 -861 2216 188 173 67 chr5_random 1757247 1758051 -950729 + L1MB2 LINE L1 5281 6169 -2 22 0 0 0 chr5_random 1758051 1758073 -950707 + AT_rich Low_complexity Low_complexity 1 22 0 1516 199 7 17 chr5_random 1758077 1758368 -950412 - AluJb SINE Alu -24 288 1 1351 254 117 53 chr5_random 1758369 1758479 -950301 + L1MEc LINE L1 2084 2186 -4029 1743 199 7 0 chr5_random 1758479 1758785 -949995 + AluJb SINE Alu 1 308 -4 1351 254 117 53 chr5_random 1758785 1759565 -949215 + L1MEc LINE L1 2186 3003 -3212 388 260 167 69 chr5_random 1759591 1760095 -948685 + MLT1H1 LTR MaLR 3 555 0 182 114 0 29 chr5_random 1760532 1760567 -948213 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 669 279 68 26 chr5_random 1761165 1761430 -947350 + MLT1H1 LTR MaLR 1 276 -279 324 265 66 22 chr5_random 1761462 1761598 -947182 + MLT1H1 LTR MaLR 411 552 -38 2043 129 7 7 chr5_random 1762355 1762664 -946116 + AluSp SINE Alu 1 309 -4 2512 122 15 105 chr5_random 1763060 1763537 -945243 + MER57B LTR ERV1 1 434 0 1558 218 145 14 chr5_random 1763677 1764183 -944597 + MER52A LTR ERV1 1 648 -1107 3981 186 36 22 chr5_random 1764198 1764938 -943842 + MER52A LTR ERV1 1005 1755 0 4061 116 24 49 chr5_random 1764938 1765596 -943184 + MER52A-int LTR ERV1 88 729 -6808 1297 205 70 0 chr5_random 1765594 1765853 -942927 + MER52A-int LTR ERV1 1350 1626 -5911 * 2008 134 3 3 chr5_random 1765877 1766175 -942605 + AluSp SINE Alu 1 298 -15 354 110 330 11 chr5_random 1766177 1766268 -942512 + MER57B-int LTR ERV1 4349 4468 -3069 38379 53 72 3 chr5_random 1766268 1771948 -936832 + L1PA3 LINE L1 1 6071 -84 1282 118 5 5 chr5_random 1772049 1772236 -936544 + AluSp SINE Alu 112 298 -15 339 132 330 11 chr5_random 1772238 1772329 -936451 + MER57B-int LTR ERV1 3680 3799 -2147 43562 56 3 2 chr5_random 1772329 1778508 -930272 + L1PA3 LINE L1 1 6187 0 10747 117 30 34 chr5_random 1778511 1778965 -929815 + MER57B-int LTR ERV1 4465 4919 -2618 2260 104 7 0 chr5_random 1778965 1779264 -929516 - AluY SINE Alu -6 305 5 10747 117 30 34 chr5_random 1779264 1779577 -929203 + MER57B-int LTR ERV1 4919 5232 -2305 2170 128 7 0 chr5_random 1779577 1779874 -928906 + AluSx SINE Alu 1 299 -13 10747 117 30 34 chr5_random 1779874 1780835 -927945 + MER57B-int LTR ERV1 5232 6188 -1349 2452 157 33 5 chr5_random 1780827 1781223 -927557 + MER57B-int LTR ERV1 6661 7067 -470 * 720 154 9 0 chr5_random 1781467 1781577 -927203 + MER57B-int LTR ERV1 7032 7142 -395 2209 113 0 0 chr5_random 1781577 1781870 -926910 - AluY SINE Alu -18 293 1 773 108 23 31 chr5_random 1781885 1782015 -926765 + LTR54B LTR ERV1 3 131 -367 1409 132 132 0 chr5_random 1782016 1782244 -926536 + MER57B-int LTR ERV1 7280 7537 0 2471 143 90 2 chr5_random 1782244 1782643 -926137 + MER57B LTR ERV1 1 434 0 232 209 0 0 chr5_random 1782684 1782727 -926053 + LTR6A LTR ERV1 1 43 -521 4082 111 12 11 chr5_random 1782727 1783287 -925493 + LTR6A LTR ERV1 4 564 0 338 241 89 71 chr5_random 1784853 1785164 -923616 + MLT1H LTR MaLR 214 549 0 2519 57 7 0 chr5_random 1786005 1786304 -922476 - AluSg SINE Alu -9 301 1 1055 218 34 55 chr5_random 1786866 1787246 -921534 + MER66A LTR ERV1 67 438 -40 794 292 55 0 chr5_random 1787788 1788100 -920680 - L1M4 LINE L1 -1685 4461 4133 316 247 21 21 chr5_random 1788103 1788196 -920584 - LTR45 LTR ERV1 -1 524 432 2331 98 0 19 chr5_random 1788213 1788530 -920250 + AluY SINE Alu 1 311 0 9623 165 60 29 chr5_random 1788530 1788959 -919821 + L1MA3 LINE L1 2964 3378 -2927 2036 140 13 0 chr5_random 1788959 1789266 -919514 + AluSx SINE Alu 1 311 -1 9623 165 60 29 chr5_random 1789266 1790675 -918105 + L1MA3 LINE L1 3378 4741 -1564 1900 89 8 15 chr5_random 1790675 1790934 -917846 - AluY SINE Alu -19 292 36 9623 165 60 29 chr5_random 1790934 1791361 -917419 + L1MA3 LINE L1 4741 5153 -1152 1593 194 55 3 chr5_random 1791361 1791654 -917126 + AluJb SINE Alu 1 308 -4 9623 165 60 29 chr5_random 1791654 1792318 -916462 + L1MA3 LINE L1 5153 6008 -297 3093 159 42 8 chr5_random 1792318 1792845 -915935 - MER52A LTR ERV1 0 1755 1211 270 316 20 46 chr5_random 1792886 1793082 -915698 - LTR49-int LTR ERV1 -525 4429 4239 2169 135 53 5 chr5_random 1793627 1794028 -914752 - LTR49-int LTR ERV1 -433 5696 4410 14575 109 12 3 chr5_random 1794039 1799255 -909525 - L1PA7 LINE L1 -5 6464 1135 570 157 0 0 chr5_random 1799235 1799324 -909456 - L1PA7 LINE L1 -6369 92 4 * 3863 178 34 96 chr5_random 1799326 1800110 -908670 - LTR49-int LTR ERV1 -1013 5318 4620 1600 163 24 24 chr5_random 1800110 1800404 -908376 - AluJb SINE Alu -17 295 2 3863 178 34 96 chr5_random 1800404 1800723 -908057 - LTR49-int LTR ERV1 -1711 4620 4283 254 215 114 40 chr5_random 1800713 1800824 -907956 - LTR49-int LTR ERV1 -2570 4967 4841 * 2016 148 7 0 chr5_random 1800824 1801121 -907659 + AluSx SINE Alu 1 299 -13 254 215 114 40 chr5_random 1801121 1801158 -907622 - LTR49-int LTR ERV1 -2696 4841 4808 912 232 103 20 chr5_random 1801170 1801225 -907555 - LTR49-int LTR ERV1 -2166 4021 3972 1817 187 3 0 chr5_random 1801225 1801535 -907245 - AluJb SINE Alu -1 311 1 912 232 103 20 chr5_random 1801535 1801857 -906923 - LTR49-int LTR ERV1 -2215 3972 2486 2746 194 79 74 chr5_random 1802113 1802700 -906080 - LTR49-int LTR ERV1 -2478 3853 3271 2096 118 0 7 chr5_random 1802700 1802989 -905791 - AluSq SINE Alu -24 289 3 2746 194 79 74 chr5_random 1802989 1803077 -905703 - LTR49-int LTR ERV1 -3060 3271 3185 1593 175 58 4 chr5_random 1803077 1803351 -905429 + AluJb SINE Alu 1 289 -23 2746 194 79 74 chr5_random 1803351 1803820 -904960 - LTR49-int LTR ERV1 -3146 3185 1010 1653 182 3 50 chr5_random 1803832 1804151 -904629 + AluJb SINE Alu 3 306 -6 639 251 54 35 chr5_random 1804178 1804381 -904399 - LTR57-int LTR ERVL -4768 575 369 * 713 185 32 117 chr5_random 1804206 1804381 -904399 - LTR49-int LTR ERV1 -757 1029 841 1772 181 0 0 chr5_random 1804381 1804663 -904117 + AluSx SINE Alu 21 302 -10 713 185 32 117 chr5_random 1804663 1804682 -904098 - LTR49-int LTR ERV1 -945 841 822 2182 122 0 0 chr5_random 1804682 1804970 -903810 + AluSx SINE Alu 1 288 -24 282 73 0 0 chr5_random 1804970 1805011 -903769 + (TG)n Simple_repeat Simple_repeat 1 41 0 713 185 32 117 chr5_random 1805011 1805063 -903717 - LTR49-int LTR ERV1 -962 824 802 319 279 19 19 chr5_random 1805227 1805331 -903449 - LTR49-int LTR ERV1 -3811 2520 2417 2045 136 13 0 chr5_random 1805726 1806028 -902752 - AluSp SINE Alu -7 306 1 1832 68 0 0 chr5_random 1806144 1806364 -902416 - AluY SINE Alu -91 220 1 252 54 54 0 chr5_random 1806365 1806402 -902378 + HERVK9 LTR ERVK 5763 5801 -115 * 2172 120 3 9 chr5_random 1806398 1806723 -902057 - HERVK9 LTR ERVK -1011 4905 4583 1929 52 0 0 chr5_random 1806724 1806954 -901826 - HERVK9 LTR ERVK -1976 3940 3711 21238 90 2 6 chr5_random 1806954 1809752 -899028 - HERVK9 LTR ERVK -3130 2786 1 3141 89 151 18 chr5_random 1809752 1810203 -898577 - MER9 LTR ERVK 0 511 1 12779 96 5 2 chr5_random 1810203 1811884 -896896 - HERVK14 LTR ERVK -4055 1890 205 583 139 20 0 chr5_random 1811878 1811979 -896801 - HERVK14 LTR ERVK -5842 103 1 * 1787 89 14 9 chr5_random 1811979 1812259 -896521 - LTR14A LTR ERVK 0 344 1 3069 227 21 20 chr5_random 1812264 1813057 -895723 + L1MB1 LINE L1 4060 4853 -1293 928 291 65 10 chr5_random 1813062 1813371 -895409 - LTR40a LTR ERVL -192 327 2 792 154 7 0 chr5_random 1813671 1813820 -894960 - L1PB1 LINE L1 -2 6149 6000 243 130 22 0 chr5_random 1814234 1814280 -894500 + MADE1 DNA Mariner 34 80 0 1665 164 22 130 chr5_random 1814540 1815039 -893741 + MER65A LTR ERV1 1 445 0 697 305 82 3 chr5_random 1816356 1816638 -892142 - LTR16A LTR ERVL -8 442 139 2142 109 0 0 chr5_random 1817401 1817717 -891063 - AluSc SINE Alu 0 323 8 223 143 24 24 chr5_random 1818918 1818960 -889820 - MER5B DNA MER1_type -136 42 1 478 267 35 45 chr5_random 1819957 1820159 -888621 - L1ME LINE L1 -2011 4069 3870 * 2817 161 55 13 chr5_random 1820150 1820766 -888014 + L1MB1 LINE L1 5338 5979 -189 1059 263 122 40 chr5_random 1820807 1821810 -886970 - L1ME LINE L1 -2480 3600 2516 1029 296 117 34 chr5_random 1821847 1822117 -886663 - L1ME LINE L1 -3875 2386 2140 2373 75 7 0 chr5_random 1822117 1822423 -886357 - AluY SINE Alu -3 308 1 1029 296 117 34 chr5_random 1822423 1823796 -884984 - L1ME LINE L1 -4121 2140 558 1914 60 16 0 chr5_random 1826302 1826554 -882226 + L1PA4 LINE L1 5897 6152 -3 26 0 0 0 chr5_random 1826703 1826729 -882051 + AT_rich Low_complexity Low_complexity 1 26 0 1798 165 3 75 chr5_random 1828472 1828847 -879933 - MER7A DNA MER2_type 0 346 1 423 0 0 0 chr5_random 1829344 1829391 -879389 + (TG)n Simple_repeat Simple_repeat 2 48 0 1220 136 0 0 chr5_random 1829802 1829971 -878809 - AluY SINE Alu -16 295 127 374 322 112 39 chr5_random 1830761 1830966 -877814 + L2 LINE L2 3004 3223 -49 1009 164 58 13 chr5_random 1831608 1831834 -876946 + L1MB3 LINE L1 5947 6182 -1 486 317 96 35 chr5_random 1832450 1832680 -876100 - MIR SINE MIR -17 245 2 377 333 72 0 chr5_random 1832692 1832887 -875893 + MIR SINE MIR 30 238 -24 266 360 112 12 chr5_random 1834595 1834756 -874024 + L3 LINE CR1 186 362 -1215 240 321 93 0 chr5_random 1835231 1835367 -873413 + MLT1L LTR MaLR 7 155 -460 264 292 108 25 chr5_random 1835367 1835727 -873053 - MER20B DNA MER1_type 0 783 394 523 255 119 17 chr5_random 1836162 1836397 -872383 - MER20B DNA MER1_type -406 377 119 2066 154 3 0 chr5_random 1836665 1836976 -871804 - AluSx SINE Alu 0 312 1 1623 195 67 3 chr5_random 1837079 1837423 -871357 - MER47A DNA MER2_type 0 366 1 182 232 29 0 chr5_random 1837423 1837492 -871288 + (TATATG)n Simple_repeat Simple_repeat 4 74 0 267 122 0 0 chr5_random 1837497 1837546 -871234 + (TG)n Simple_repeat Simple_repeat 1 49 0 308 345 18 35 chr5_random 1837883 1838054 -870726 - L1ME LINE L1 -582 5580 5413 15653 49 1 1 chr5_random 1838691 1841435 -867345 - L1PA4 LINE L1 -2 6153 3409 1844 144 0 4 chr5_random 1841950 1842221 -866559 + AluSx SINE Alu 31 300 -12 1179 265 58 18 chr5_random 1842352 1842952 -865828 + L1MB2 LINE L1 3055 3678 -2468 * 3177 224 59 68 chr5_random 1842947 1843375 -865405 + L1MB2 LINE L1 3935 4366 -1780 1921 161 0 49 chr5_random 1843375 1843699 -865081 + AluSx SINE Alu 1 308 -4 3177 224 59 68 chr5_random 1843699 1843766 -865014 + L1MB2 LINE L1 4366 4432 -1714 2050 139 0 7 chr5_random 1843766 1844067 -864713 + AluSx SINE Alu 1 299 -13 3177 224 59 68 chr5_random 1844067 1844871 -863909 + L1MB2 LINE L1 4432 5224 -922 1144 148 110 0 chr5_random 1844871 1845080 -863700 - MER46A DNA MER2_type -3 233 2 3177 224 59 68 chr5_random 1845080 1845137 -863643 + L1MB2 LINE L1 5224 5280 -866 2013 186 176 64 chr5_random 1846180 1846964 -861816 + L1MB2 LINE L1 5281 6152 -19 561 165 60 71 chr5_random 1847065 1847247 -861533 - L1M3 LINE L1 -717 5451 5272 1184 182 10 0 chr5_random 1847344 1847542 -861238 + AluJb SINE Alu 107 306 -6 1046 235 130 60 chr5_random 1847553 1848324 -860456 + L1M4 LINE L1 2110 2934 -3212 289 305 204 13 chr5_random 1848350 1848576 -860204 + MLT1H1 LTR MaLR 3 271 -284 286 88 70 18 chr5_random 1848798 1848855 -859925 + MLT1G1 LTR MaLR 536 595 0 282 143 0 0 chr5_random 1849289 1849338 -859442 + (A)n Simple_repeat Simple_repeat 1 49 0 559 292 83 36 chr5_random 1849995 1850297 -858483 + MLT1H1 LTR MaLR 1 319 -271 245 257 53 26 chr5_random 1850369 1850482 -858298 + MLT1H1 LTR MaLR 418 533 -22 424 188 101 7 chr5_random 1851222 1851360 -857420 + AluSp SINE Alu 1 151 -162 2097 195 71 0 chr5_random 1851464 1851899 -856881 + MER52A LTR ERV1 1290 1755 0 3867 136 35 36 chr5_random 1851899 1852816 -855964 + MER52A-int LTR ERV1 88 1004 -4942 2250 97 13 7 chr5_random 1852841 1853150 -855630 + AluSq SINE Alu 1 311 -2 2243 126 15 105 chr5_random 1853546 1854023 -854757 + MER57B LTR ERV1 1 434 0 1699 216 278 0 chr5_random 1854163 1854678 -854102 + MER52A LTR ERV1 1 658 -1097 3061 147 14 30 chr5_random 1854683 1855254 -853526 + MER52A LTR ERV1 1005 1566 -189 295 233 0 0 chr5_random 1856065 1856125 -852655 - MER117 DNA MER1_type -40 157 98 3535 62 2 0 chr5_random 1856332 1856787 -851993 - L1PA5 LINE L1 -2 6152 5697 22 0 0 0 chr5_random 1857096 1857118 -851662 + AT_rich Low_complexity Low_complexity 1 22 0 7000 89 15 0 chr5_random 1858150 1859130 -849650 + L1P LINE L1 7 1001 -5145 1948 172 99 22 chr5_random 1860227 1860282 -848498 - SATR1 Satellite Satellite -97 1591 1542 2404 74 0 0 chr5_random 1860282 1860580 -848200 - AluY SINE Alu -13 298 1 1948 172 99 22 chr5_random 1860580 1861704 -847076 - SATR1 Satellite Satellite -146 1542 1 513 306 73 67 chr5_random 2461736 2462084 -246696 + L2 LINE L2 2794 3138 -134 2011 100 7 4 chr5_random 2462084 2462354 -246426 + AluSx SINE Alu 1 271 -41 1317 47 0 24 chr5_random 2462354 2462523 -246257 + L1PA3 LINE L1 5990 6154 -1 513 306 73 67 chr5_random 2462523 2462613 -246167 + L2 LINE L2 3137 3223 -49 512 169 0 11 chr5_random 2463822 2463911 -244869 + FLAM_A SINE Alu 31 118 -24 200 0 0 91 chr5_random 2463911 2463944 -244836 + (T)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr5_random 2464078 2464101 -244679 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1195 178 14 5 chr5_random 2464103 2464322 -244458 - AluSq SINE Alu -13 300 80 272 258 104 37 chr5_random 2464507 2464670 -244110 + L1M4 LINE L1 3407 3580 -2566 668 187 272 21 chr5_random 2464679 2464914 -243866 - AluSg SINE Alu -5 295 2 330 333 19 0 chr5_random 2464914 2465076 -243704 - L1M4 LINE L1 -2387 3759 3595 2274 84 0 24 chr5_random 2465082 2465379 -243401 + AluY SINE Alu 1 290 -21 601 120 176 24 chr5_random 2465389 2465514 -243266 + FRAM SINE Alu 21 164 -12 324 273 93 12 chr5_random 2465549 2465710 -243070 - L1M4 LINE L1 -2566 3580 3407 474 118 0 0 chr5_random 2466015 2466083 -242697 + FRAM/FAM SINE Alu 20 87 -98 2222 124 0 0 chr5_random 2466453 2466751 -242029 + AluSx SINE Alu 1 298 -14 394 250 144 25 chr5_random 2467149 2467309 -241471 + MIR SINE MIR 80 258 -4 233 118 0 59 chr5_random 2467315 2467366 -241414 - L1MB4 LINE L1 -1 6179 6132 357 135 14 40 chr5_random 2467499 2467572 -241208 - MLT1F LTR MaLR -3 564 494 381 255 11 11 chr5_random 2467572 2467666 -241114 + MLT1E3 LTR MaLR 1 94 -560 418 184 0 0 chr5_random 2467694 2467770 -241010 + MLT1E3 LTR MaLR 78 153 -440 217 139 28 0 chr5_random 2467801 2467837 -240943 + GA-rich Low_complexity Low_complexity 3 39 0 775 253 119 40 chr5_random 2467881 2468158 -240622 + MLT1E3 LTR MaLR 263 561 -63 2072 136 10 3 chr5_random 2468161 2468463 -240317 - AluSp SINE Alu -9 304 1 3448 79 4 2 chr5_random 2468472 2468927 -239853 + L1PB1 LINE L1 5695 6150 -1 240 162 91 131 chr5_random 2468991 2469090 -239690 + MLT1E LTR MaLR 499 593 0 * 1577 255 137 2 chr5_random 2469090 2469503 -239277 - MLT1F LTR MaLR -71 471 1 402 224 79 7 chr5_random 2469526 2469678 -239102 - L1M4 LINE L1 -2932 3214 3052 1398 188 6 86 chr5_random 2469682 2470007 -238773 - AluJo SINE Alu -8 304 6 420 200 52 9 chr5_random 2470116 2470231 -238549 - L1ME3A LINE L1 0 6170 6051 596 245 50 33 chr5_random 2470622 2470907 -237873 - L1MC4a LINE L1 -171 5997 5717 1668 222 120 11 chr5_random 2470907 2470936 -237844 + MLT1D LTR MaLR 1 25 -480 2338 100 0 10 chr5_random 2470936 2471246 -237534 + AluY SINE Alu 1 307 -4 1668 222 120 11 chr5_random 2471246 2471666 -237114 + MLT1D LTR MaLR 25 499 -6 770 259 117 12 chr5_random 2471678 2471925 -236855 - L1MC4a LINE L1 -2083 5725 5453 225 167 83 0 chr5_random 2472386 2472434 -236346 - MER117 DNA MER1_type -136 61 10 180 0 0 0 chr5_random 2472626 2472646 -236134 + (TG)n Simple_repeat Simple_repeat 2 21 0 2083 113 17 10 chr5_random 2472787 2473089 -235691 - AluSq SINE Alu -9 304 1 194 306 81 19 chr5_random 2473762 2473922 -234858 + MIR SINE MIR 57 226 -36 414 0 0 0 chr5_random 2474355 2474401 -234379 + (TA)n Simple_repeat Simple_repeat 2 47 0 285 287 83 0 chr5_random 2474458 2474566 -234214 + L2 LINE L2 3156 3272 0 265 243 39 39 chr5_random 2474700 2474803 -233977 - MER106B DNA MER1_type -904 155 53 189 275 22 66 chr5_random 2475204 2475295 -233485 - MER5A DNA MER1_type -99 90 4 1041 192 142 31 chr5_random 2475325 2475645 -233135 - LTR37A LTR ERV1 0 426 56 1515 191 28 14 chr5_random 2475645 2475927 -232853 + AluJb SINE Alu 1 286 -26 1041 192 142 31 chr5_random 2475927 2475987 -232793 - LTR37A LTR ERV1 -370 56 4 2234 99 3 10 chr5_random 2476137 2476430 -232350 - AluSc SINE Alu -16 293 3 1098 171 20 34 chr5_random 2476613 2476850 -231930 + L1MB3 LINE L1 5676 5913 -256 424 239 63 64 chr5_random 2476869 2477157 -231623 + MER39 LTR ERV1 23 520 -187 1528 161 178 20 chr5_random 2477160 2477565 -231215 + LTR54B LTR ERV1 8 476 -22 240 214 0 0 chr5_random 2477639 2477681 -231099 + MER34 LTR ERV1 370 411 -131 520 144 85 8 chr5_random 2477726 2477844 -230936 + MER34B LTR ERV1 439 565 0 1385 120 16 50 chr5_random 2477844 2477906 -230874 + L1MB3 LINE L1 5910 5973 -210 1511 193 30 14 chr5_random 2477906 2478201 -230579 + AluJo SINE Alu 1 300 -12 1385 120 16 50 chr5_random 2478201 2478380 -230400 + L1MB3 LINE L1 5973 6143 -40 2186 89 3 11 chr5_random 2478380 2478662 -230118 + AluSc SINE Alu 1 280 -29 282 73 0 0 chr5_random 2478662 2478703 -230077 + (TA)n Simple_repeat Simple_repeat 1 41 0 343 269 144 25 chr5_random 2478724 2478884 -229896 - MIR SINE MIR -4 258 80 2129 128 0 0 chr5_random 2479283 2479581 -229199 - AluSx SINE Alu -14 298 1 390 257 118 7 chr5_random 2481090 2481226 -227554 - L1M4 LINE L1 -1498 4884 4734 1303 229 140 11 chr5_random 2481245 2481695 -227085 - L1MC4 LINE L1 -1983 5993 5486 1463 239 113 38 chr5_random 2481698 2482409 -226371 - L1MC4 LINE L1 -2665 3415 2652 278 290 65 0 chr5_random 2482428 2482535 -226245 - L1MC4 LINE L1 -5906 164 51 1638 197 14 0 chr5_random 2482594 2482888 -225892 - AluJb SINE Alu -14 298 1 544 246 67 108 chr5_random 2482905 2483257 -225523 - L1M4 LINE L1 -2412 3970 3605 1784 175 0 3 chr5_random 2483257 2483543 -225237 + AluJb SINE Alu 11 295 -17 544 246 67 108 chr5_random 2483543 2483610 -225170 - L1M4 LINE L1 -2777 3605 3537 2018 149 0 0 chr5_random 2483610 2483899 -224881 - AluJb SINE Alu -23 289 1 544 246 67 108 chr5_random 2483899 2484034 -224746 - L1M4 LINE L1 -2845 3537 3438 836 227 0 0 chr5_random 2484038 2484201 -224579 + AluJb SINE Alu 134 296 -16 368 262 148 27 chr5_random 2484203 2484327 -224453 - L1M4 LINE L1 -2943 3439 3285 2033 102 88 0 chr5_random 2484327 2484610 -224170 - AluSc SINE Alu -1 308 1 368 262 148 27 chr5_random 2484610 2484668 -224112 - L1M4 LINE L1 -3097 3285 3235 1355 155 9 5 chr5_random 2484668 2484887 -223893 + AluJb SINE Alu 85 304 -8 335 266 140 10 chr5_random 2485117 2485425 -223355 - L1M4 LINE L1 -3417 2965 2618 288 0 0 0 chr5_random 2485494 2485526 -223254 + (TG)n Simple_repeat Simple_repeat 2 33 0 961 228 56 48 chr5_random 2485531 2485799 -222981 - AluJo SINE Alu -42 270 1 1411 201 43 33 chr5_random 2486266 2486818 -221962 - L1MD2 LINE L1 -10 6349 5752 380 234 195 39 chr5_random 2486983 2487137 -221643 - L1ME3A LINE L1 -8 6162 5985 473 111 0 0 chr5_random 2487141 2487204 -221576 - AluS SINE Alu -248 65 3 962 167 7 0 chr5_random 2487224 2487374 -221406 - AluJb SINE Alu -26 286 136 1133 259 97 29 chr5_random 2487394 2487656 -221124 - L1ME3A LINE L1 -183 5987 5744 504 0 0 0 chr5_random 2487656 2487712 -221068 + (TTTC)n Simple_repeat Simple_repeat 2 57 0 2056 118 14 4 chr5_random 2487715 2487995 -220785 - AluSq SINE Alu -30 283 1 1133 259 97 29 chr5_random 2487995 2488180 -220600 - L1ME3A LINE L1 -427 5743 5505 2413 89 3 18 chr5_random 2488182 2488519 -220261 - MER41A LTR ERV1 0 554 223 420 340 11 15 chr5_random 2488754 2489019 -219761 - L1M4 LINE L1 -4528 1856 1593 272 304 90 11 chr5_random 2489035 2489400 -219380 - L1M4 LINE L1 -4554 1759 1034 22266 52 3 3 chr5_random 2490838 2494439 -214341 - L1PA4 LINE L1 0 6155 2558 1097 104 3 7 chr5_random 2494447 2509855 -198925 + BSR/Beta Satellite Satellite 1 15344 -3 267 207 0 17 chr5_random 2509839 2509897 -198883 + AluJ/FRAM SINE Alu 232 288 -14 * 459 168 0 0 chr5_random 2509899 2509994 -198786 + (GAGTG)n Simple_repeat Simple_repeat 5 99 0 379 156 31 0 chr5_random 2510005 2510069 -198711 + AluS SINE Alu 225 290 -12 759 183 0 0 chr5_random 2510075 2510255 -198525 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 365 191 29 0 chr5_random 2510267 2510335 -198445 + AluS SINE Alu 223 292 -8 840 199 0 0 chr5_random 2510335 2510682 -198098 + (GAATG)n Satellite Satellite 1 347 0 344 206 29 0 chr5_random 2510724 2510792 -197988 + AluJ/FRAM SINE Alu 225 294 -8 711 127 0 0 chr5_random 2510792 2510910 -197870 + (GAATG)n Simple_repeat Simple_repeat 5 122 0 336 182 0 0 chr5_random 2510921 2510976 -197804 + AluJ/FRAM SINE Alu 225 279 -23 1170 121 0 0 chr5_random 2510985 2511297 -197483 + (GAGTG)n Simple_repeat Simple_repeat 1 312 0 546 151 0 0 chr5_random 2511335 2511441 -197339 + (GAATG)n Simple_repeat Simple_repeat 5 110 0 374 191 29 0 chr5_random 2511452 2511520 -197260 + AluJ/FRAM SINE Alu 225 294 -8 852 164 0 0 chr5_random 2511527 2511704 -197076 + (GAGTG)n Simple_repeat Simple_repeat 4 180 0 302 250 29 0 chr5_random 2511734 2511802 -196978 + AluJ/FRAM SINE Alu 225 294 -8 234 105 0 0 chr5_random 2511798 2511836 -196944 + (GAATG)n Simple_repeat Simple_repeat 4 41 0 * 837 172 0 0 chr5_random 2511829 2512009 -196771 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 232 185 0 25 chr5_random 2512033 2512114 -196666 + (GAATG)n Simple_repeat Simple_repeat 3 81 0 288 200 0 0 chr5_random 2512128 2512183 -196597 + AluJ/FRAM SINE Alu 225 279 -23 873 163 0 0 chr5_random 2512195 2512373 -196407 + (GAATG)n Simple_repeat Simple_repeat 1 178 0 347 188 16 0 chr5_random 2512385 2512449 -196331 + AluS SINE Alu 223 287 -13 648 130 0 0 chr5_random 2512449 2512564 -196216 + (GAATG)n Simple_repeat Simple_repeat 2 116 0 343 199 43 9 chr5_random 2512564 2512652 -196128 + AluSc SINE Alu 223 277 -22 1137 105 0 0 chr5_random 2512656 2512886 -195894 + (GAATG)n Satellite Satellite 1 230 0 1056 133 0 0 chr5_random 2512906 2513086 -195694 + (GAATG)n Satellite Satellite 1 180 0 273 238 16 0 chr5_random 2513098 2513161 -195619 + AluJ/FRAM SINE Alu 225 288 -14 297 159 0 0 chr5_random 2513161 2513224 -195556 + (GAATG)n Simple_repeat Simple_repeat 4 66 0 334 230 26 4 chr5_random 2513226 2513325 -195455 + AluJ/FRAM SINE Alu 225 280 -22 867 133 0 0 chr5_random 2513329 2513480 -195300 + (GAATG)n Simple_repeat Simple_repeat 5 155 0 373 172 31 0 chr5_random 2513491 2513555 -195225 + AluS SINE Alu 223 288 -12 289 98 0 0 chr5_random 2513555 2513596 -195184 + (GAATG)n Simple_repeat Simple_repeat 1 41 0 861 172 0 0 chr5_random 2513596 2513776 -195004 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 500 159 18 0 chr5_random 2513755 2513868 -194912 + (GAATG)n Simple_repeat Simple_repeat 2 116 0 * 307 218 0 0 chr5_random 2513868 2513923 -194857 + AluJ/FRAM SINE Alu 225 279 -23 1092 124 0 0 chr5_random 2513938 2514116 -194664 + (GAGTG)n Simple_repeat Simple_repeat 3 180 0 813 142 0 0 chr5_random 2514123 2514264 -194516 + (GAATG)n Simple_repeat Simple_repeat 5 145 0 327 200 0 0 chr5_random 2514275 2514330 -194450 + AluJ/FRAM SINE Alu 225 279 -23 1143 102 0 0 chr5_random 2514335 2514440 -194340 + (GAGTG)n Simple_repeat Simple_repeat 1 282 0 1143 102 0 0 chr5_random 2514440 2514617 -194163 + (GAGTG)n Simple_repeat Simple_repeat 4 180 0 257 250 16 0 chr5_random 2514672 2514736 -194044 + AluS SINE Alu 225 289 -13 713 128 15 0 chr5_random 2514736 2514869 -193911 + (GAATG)n Simple_repeat Simple_repeat 2 136 0 400 125 31 0 chr5_random 2514869 2514933 -193847 + AluJ/FRAM SINE Alu 225 290 -22 957 92 0 0 chr5_random 2514933 2515075 -193705 + (GAATG)n Simple_repeat Simple_repeat 5 146 0 352 188 31 0 chr5_random 2515086 2515150 -193630 + AluS SINE Alu 223 288 -12 957 150 0 0 chr5_random 2515151 2515196 -193584 + (GAGTG)n Simple_repeat Simple_repeat 1 225 0 957 150 0 0 chr5_random 2515196 2515376 -193404 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 303 100 0 0 chr5_random 2515544 2515584 -193196 + Alu SINE Alu 226 265 -37 801 165 0 0 chr5_random 2515610 2515774 -193006 + (GAATG)n Simple_repeat Simple_repeat 5 168 0 359 188 16 0 chr5_random 2515785 2515849 -192931 + AluS SINE Alu 223 287 -13 828 127 0 0 chr5_random 2515849 2515991 -192789 + (GAATG)n Satellite Satellite 5 146 0 422 183 9 0 chr5_random 2516060 2516175 -192605 + (GAATG)n Satellite Satellite 5 120 0 385 169 31 0 chr5_random 2516185 2516250 -192530 + AluJ/FRAM SINE Alu 224 290 -12 825 172 0 0 chr5_random 2516251 2516431 -192349 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 333 230 27 0 chr5_random 2516443 2516517 -192263 + AluS SINE Alu 225 300 -2 960 141 0 0 chr5_random 2516524 2516701 -192079 + (GAGTG)n Simple_repeat Simple_repeat 3 179 0 393 191 0 0 chr5_random 2516702 2516807 -191973 + (GAATG)n Simple_repeat Simple_repeat 2 106 0 356 189 37 8 chr5_random 2516807 2516896 -191884 + AluJ/FRAM SINE Alu 225 280 -22 342 156 0 0 chr5_random 2516904 2516968 -191812 + (GAGTG)n Simple_repeat Simple_repeat 3 66 0 1020 133 0 0 chr5_random 2516970 2517150 -191630 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 834 180 0 0 chr5_random 2517152 2517330 -191450 + (GAGTG)n Simple_repeat Simple_repeat 1 178 0 298 203 16 0 chr5_random 2517342 2517406 -191374 + AluS SINE Alu 223 287 -13 777 194 0 0 chr5_random 2517437 2517617 -191163 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 1098 124 0 9 chr5_random 2517631 2518349 -190431 + (GAATG)n Satellite Satellite 1 887 0 1098 90 0 0 chr5_random 2518349 2518527 -190253 + (GAATG)n Satellite Satellite 2 179 0 1044 125 0 0 chr5_random 2518698 2519063 -189717 + (GAATG)n Satellite Satellite 1 365 0 1029 148 0 3 chr5_random 2519074 2520140 -188640 + (GAATG)n Satellite Satellite 1 1240 0 736 130 6 6 chr5_random 2520155 2520317 -188463 + (GAATG)n Satellite Satellite 4 165 0 882 135 0 0 chr5_random 2520335 2520513 -188267 + (GAATG)n Satellite Satellite 2 179 0 713 146 0 27 chr5_random 2520549 2520734 -188046 + (GAATG)n Satellite Satellite 1 180 0 936 148 0 0 chr5_random 2520749 2521233 -187547 + (GAATG)n Satellite Satellite 1 484 0 2958 90 0 0 chr5_random 2521265 2521735 -187045 - L1P3 LINE L1 -503 5651 5182 * 7057 106 19 1 chr5_random 2521720 2522772 -186008 + L1P3 LINE L1 4103 5173 -973 22 0 0 0 chr5_random 2522946 2522968 -185812 + AT_rich Low_complexity Low_complexity 1 22 0 204 135 0 0 chr5_random 2523657 2523694 -185086 + (TG)n Simple_repeat Simple_repeat 2 38 0 287 119 0 17 chr5_random 2524866 2524925 -183855 + (TA)n Simple_repeat Simple_repeat 2 59 0 345 188 153 0 chr5_random 2526596 2526681 -182099 - MER5A DNA MER1_type -83 106 9 296 233 151 0 chr5_random 2528476 2528562 -180218 - MER5A DNA MER1_type -82 107 9 1597 142 8 0 chr5_random 2529693 2529932 -178848 - AluSx SINE Alu -71 241 1 24 54 0 18 chr5_random 2529938 2529969 -178811 + AT_rich Low_complexity Low_complexity 1 32 -23 429 308 0 26 chr5_random 2529969 2530086 -178694 - FLAM_A SINE Alu -16 117 4 24 54 0 18 chr5_random 2530086 2530110 -178670 + AT_rich Low_complexity Low_complexity 32 55 0 385 383 18 18 chr5_random 2530235 2530462 -178318 - MIR SINE MIR 0 262 36 269 299 72 10 chr5_random 2531086 2531183 -177597 - L3 LINE CR1 -8 1569 1467 181 323 121 50 chr5_random 2531180 2531279 -177501 - MIR SINE MIR -72 136 31 * 25 0 0 0 chr5_random 2532273 2532298 -176482 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5_random 2533176 2533197 -175583 + AT_rich Low_complexity Low_complexity 1 21 0 463 325 0 0 chr5_random 2533597 2533714 -175066 + FLAM_A SINE Alu 2 118 -15 211 350 0 17 chr5_random 2535378 2535438 -173342 - MIR SINE MIR -184 78 20 2057 141 0 10 chr5_random 2535632 2535944 -172836 - AluSx SINE Alu -3 309 1 615 228 0 24 chr5_random 2535963 2536086 -172694 - FLAM_A SINE Alu -10 123 4 451 353 21 25 chr5_random 2536238 2536473 -172307 - MIR SINE MIR 0 262 29 255 299 72 10 chr5_random 2537095 2537192 -171588 - L3 LINE CR1 -8 1569 1467 241 392 125 0 chr5_random 2537189 2537309 -171471 - MIR3 SINE MIR -72 136 2 * 529 299 0 0 chr5_random 2538975 2539092 -169688 + FLAM_A SINE Alu 2 118 -15 240 59 0 0 chr5_random 2539995 2540029 -168751 + (TC)n Simple_repeat Simple_repeat 2 35 0 208 350 0 17 chr5_random 2540854 2540914 -167866 - MIR SINE MIR -184 78 20 1956 137 3 22 chr5_random 2541101 2541415 -167365 - AluSg SINE Alu 0 310 3 462 271 83 0 chr5_random 2542141 2542333 -166447 + L1MA4 LINE L1 6089 6296 -4 209 108 46 15 chr5_random 2542600 2542665 -166115 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 2176 102 3 3 chr5_random 2542684 2542977 -165803 - AluY SINE Alu -18 293 1 23 33 0 0 chr5_random 2545131 2545161 -163619 + AT_rich Low_complexity Low_complexity 1 30 0 216 92 0 77 chr5_random 2545161 2545226 -163554 + (TTAAA)n Simple_repeat Simple_repeat 4 63 0 49 32 0 0 chr5_random 2545232 2545295 -163485 + AT_rich Low_complexity Low_complexity 1 63 0 2132 107 0 0 chr5_random 2545862 2546151 -162629 + AluY SINE Alu 3 291 -20 2156 78 0 3 chr5_random 2546438 2546744 -162036 - AluY SINE Alu 0 305 1 236 244 67 22 chr5_random 2548404 2548494 -160286 - Charlie1 DNA MER1_type -2557 204 111 25 31 0 0 chr5_random 2548947 2548979 -159801 + AT_rich Low_complexity Low_complexity 1 32 0 445 72 14 0 chr5_random 2549802 2549871 -158909 - L1PA4 LINE L1 0 6155 6086 224 220 0 0 chr5_random 2551179 2551229 -157551 + (TG)n Simple_repeat Simple_repeat 1 50 0 6444 84 52 5 chr5_random 2551399 2552360 -156420 - L1PA7 LINE L1 -2 6152 5182 6793 106 17 8 chr5_random 2552361 2553399 -155381 + L1PA7 LINE L1 4123 5170 -976 243 61 0 0 chr5_random 2554274 2554307 -154473 + (TG)n Simple_repeat Simple_repeat 2 34 0 297 212 153 0 chr5_random 2557153 2557238 -151542 - MER5A DNA MER1_type -83 106 9 7612 22 6 0 chr5_random 2558899 2560409 -148371 + L1PA2 LINE L1 4640 6155 0 21 0 0 0 chr5_random 2560460 2560481 -148299 + AT_rich Low_complexity Low_complexity 1 21 0 368 167 167 0 chr5_random 2560621 2560693 -148087 - MER5A DNA MER1_type -82 107 24 1499 241 73 37 chr5_random 2561583 2562221 -146559 - L1MEc LINE L1 -3654 2561 1946 235 261 17 9 chr5_random 2562370 2562485 -146295 - L1MEc LINE L1 -5270 1126 1011 1224 297 51 50 chr5_random 2562576 2563179 -145601 - L1MEc LINE L1 -5753 643 40 230 384 70 57 chr5_random 2563200 2563531 -145249 + L2 LINE L2 2938 3272 0 433 259 123 44 chr5_random 2564025 2564318 -144462 - L1ME4a LINE L1 -283 5838 5523 1908 149 7 3 chr5_random 2564361 2564656 -144124 + AluSg SINE Alu 1 296 -14 5617 72 20 1 chr5_random 2565404 2566156 -142624 - MER4E LTR ERV1 0 766 1 2511 58 0 6 chr5_random 2566509 2566822 -141958 + AluY SINE Alu 1 311 0 22 56 0 0 chr5_random 2566846 2566882 -141898 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5_random 2569395 2569431 -139349 + AT_rich Low_complexity Low_complexity 1 36 0 349 307 84 0 chr5_random 2569570 2569736 -139044 - L2 LINE L2 -409 2905 2726 36 0 0 0 chr5_random 2570376 2570412 -138368 + AT_rich Low_complexity Low_complexity 1 36 0 33 0 0 0 chr5_random 2570438 2570471 -138309 + AT_rich Low_complexity Low_complexity 1 33 0 869 201 22 11 chr5_random 2571459 2571643 -137137 - MER58A DNA MER1_type 0 224 39 291 173 115 0 chr5_random 2571701 2571762 -137018 - L1M3 LINE L1 -523 5779 5728 1991 149 37 3 chr5_random 2572348 2572696 -136084 - MER46B DNA MER2_type 0 236 2 525 165 37 94 chr5_random 2575536 2575677 -133103 + MER33 DNA MER1_type 51 229 -2356 1600 119 8 8 chr5_random 2575677 2575913 -132867 - AluSq SINE Alu -22 291 56 525 165 37 94 chr5_random 2575913 2576003 -132777 + MER33 DNA MER1_type 229 323 -1 2008 159 0 0 chr5_random 2576348 2576656 -132124 + AluSx SINE Alu 1 308 -4 2362 76 0 25 chr5_random 2576733 2577049 -131731 - AluY SINE Alu -3 308 1 327 145 66 26 chr5_random 2577363 2577439 -131341 - MER116 DNA Mariner -1 79 1 21 0 0 0 chr5_random 2578073 2578094 -130686 + AT_rich Low_complexity Low_complexity 1 21 0 1789 224 51 45 chr5_random 2578312 2578724 -130056 + L1M4 LINE L1 3076 3484 -2662 1556 135 45 4 chr5_random 2578724 2578969 -129811 + AluSx SINE Alu 1 255 -57 2154 118 3 19 chr5_random 2578969 2579283 -129497 + AluSq SINE Alu 3 311 -2 1789 224 51 45 chr5_random 2579283 2579493 -129287 + L1M4 LINE L1 3483 3703 -2443 1522 184 71 7 chr5_random 2579495 2579778 -129002 + AluJo SINE Alu 5 305 -7 839 262 97 19 chr5_random 2579792 2580154 -128626 + L1ME1 LINE L1 5771 6160 -6 567 206 188 12 chr5_random 2581205 2581370 -127410 - MIR SINE MIR 0 262 69 783 237 0 0 chr5_random 2581570 2581726 -127054 - FRAM SINE Alu -20 156 1 2100 113 3 19 chr5_random 2582352 2582661 -126119 - AluSx SINE Alu -8 304 1 235 325 176 20 chr5_random 2584807 2585102 -123678 + L2 LINE L2 1181 1521 -1793 823 307 172 34 chr5_random 2585182 2586026 -122754 + L2 LINE L2 2029 3036 -277 1899 138 30 3 chr5_random 2586026 2586322 -122458 - AluSg SINE Alu -6 304 1 823 307 172 34 chr5_random 2586322 2586482 -122298 + L2 LINE L2 3036 3173 -140 1806 155 10 10 chr5_random 2588331 2588641 -120139 + AluSx SINE Alu 3 312 0 256 267 47 23 chr5_random 2589079 2589165 -119615 - MER5B DNA MER1_type -89 89 2 729 146 0 29 chr5_random 2589216 2589353 -119427 + FLAM_C SINE Alu 1 133 0 686 205 105 3 chr5_random 2590118 2590380 -118400 + MER33 DNA MER1_type 1 363 0 23 68 0 0 chr5_random 2592288 2592332 -116448 + AT_rich Low_complexity Low_complexity 1 44 0 1224 188 5 0 chr5_random 2594123 2594330 -114450 - AluJb SINE Alu -17 295 88 337 302 50 22 chr5_random 2594694 2594833 -113947 + L1MC4a LINE L1 5062 5204 -942 1093 147 39 56 chr5_random 2594840 2595071 -113709 + AluJo SINE Alu 86 312 0 1835 285 93 15 chr5_random 2595071 2595989 -112791 + L1MC4a LINE L1 5209 5403 -743 1588 276 134 37 chr5_random 2596027 2596214 -112566 + L1MC4 LINE L1 6460 6627 -1415 1437 131 32 0 chr5_random 2596214 2596313 -112467 + MER30 DNA MER1_type 2 96 -134 441 0 0 0 chr5_random 2596313 2596362 -112418 + (CA)n Simple_repeat Simple_repeat 2 50 0 1437 131 32 0 chr5_random 2596362 2596483 -112297 + MER30 DNA MER1_type 96 229 -1 1588 276 134 37 chr5_random 2596483 2596988 -111792 + L1MC4 LINE L1 6627 7278 -764 1969 134 3 3 chr5_random 2596988 2597313 -111467 - AluSx SINE Alu 0 327 3 1588 276 134 37 chr5_random 2597313 2597598 -111182 + L1MC4 LINE L1 7278 7534 -508 389 321 62 24 chr5_random 2597702 2597911 -110869 + L1MC4 LINE L1 7691 7919 -123 315 49 0 0 chr5_random 2597911 2597952 -110828 + (CA)n Simple_repeat Simple_repeat 2 42 0 389 321 62 24 chr5_random 2597952 2598081 -110699 + L1MC4 LINE L1 7919 8042 0 532 304 172 0 chr5_random 2598463 2598667 -110113 - MIR SINE MIR -22 240 2 25 31 0 0 chr5_random 2598931 2598963 -109817 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr5_random 2599208 2599232 -109548 + AT_rich Low_complexity Low_complexity 1 24 0 874 239 88 45 chr5_random 2600968 2601320 -107460 + L1ME1 LINE L1 5694 6060 -106 257 176 0 0 chr5_random 2601324 2601375 -107405 + L1MA10 LINE L1 6284 6334 0 385 280 188 19 chr5_random 2601960 2602167 -106613 + MIR SINE MIR 11 252 -10 1902 147 17 0 chr5_random 2604640 2604939 -103841 - AluSx SINE Alu -8 304 1 719 195 69 6 chr5_random 2605058 2605217 -103563 - MER58C DNA MER1_type -2 213 45 511 348 149 39 chr5_random 2605247 2605918 -102862 + L2 LINE L2 1837 2661 -653 580 89 0 0 chr5_random 2605918 2605997 -102783 + MADE1 DNA Mariner 2 80 0 511 348 149 39 chr5_random 2605997 2606352 -102428 + L2 LINE L2 2661 2976 -338 2068 119 3 0 chr5_random 2606385 2606678 -102102 + AluSx SINE Alu 1 294 -18 589 240 155 11 chr5_random 2607252 2607523 -101257 + Charlie5 DNA MER1_type 15 2624 0 572 311 55 13 chr5_random 2608820 2609103 -99677 + L2 LINE L2 2723 3017 -296 243 325 0 18 chr5_random 2609480 2609594 -99186 - MIR SINE MIR -3 259 148 2076 128 0 10 chr5_random 2609800 2610113 -98667 + AluSg SINE Alu 1 310 0 22 0 0 0 chr5_random 2611061 2611083 -97697 + AT_rich Low_complexity Low_complexity 1 22 0 1433 109 5 0 chr5_random 2613689 2613882 -94898 + AluY SINE Alu 1 194 -117 24 0 0 0 chr5_random 2613923 2613947 -94833 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr5_random 2614802 2614838 -93942 + AT_rich Low_complexity Low_complexity 1 36 0 1949 142 0 23 chr5_random 2614900 2615209 -93571 + AluJb SINE Alu 1 302 -10 276 269 34 17 chr5_random 2615722 2615841 -92939 + HAL1 LINE L1 1134 1254 -1253 193 216 0 0 chr5_random 2615928 2615965 -92815 - MIR SINE MIR -62 146 110 319 336 62 0 chr5_random 2616076 2616189 -92591 + HAL1 LINE L1 1405 1524 -983 1372 178 80 8 chr5_random 2616449 2616713 -92067 + MSTB LTR MaLR 1 283 -143 1246 93 6 0 chr5_random 2616735 2616897 -91883 - AluSq SINE Alu -17 296 134 895 150 34 7 chr5_random 2616897 2617044 -91736 + MSTB LTR MaLR 267 417 -9 308 328 0 25 chr5_random 2617045 2617167 -91613 - L1MC4 LINE L1 -1348 6694 6576 * 410 292 121 67 chr5_random 2617150 2617872 -90908 + L1MC3 LINE L1 2257 3017 -3129 1337 236 136 94 chr5_random 2618399 2618792 -89988 + MLT1E2 LTR MaLR 1 403 -223 2208 101 3 25 chr5_random 2618792 2619108 -89672 + AluSc SINE Alu 1 309 0 1337 236 136 94 chr5_random 2619108 2619340 -89440 + MLT1E2 LTR MaLR 403 624 -2 291 265 99 77 chr5_random 2619967 2620005 -88775 - MIR SINE MIR -35 227 191 2295 116 0 0 chr5_random 2620005 2620315 -88465 + AluSx SINE Alu 2 311 -1 291 265 99 77 chr5_random 2620315 2620457 -88323 - MIR SINE MIR -71 191 43 2270 110 0 13 chr5_random 2620575 2620883 -87897 + AluSx SINE Alu 4 307 -5 827 252 75 55 chr5_random 2620935 2621320 -87460 + L1ME3A LINE L1 5670 6062 -108 1464 248 141 50 chr5_random 2622841 2624088 -84692 + L1MC3 LINE L1 4768 5398 -748 21 0 0 0 chr5_random 2624111 2624132 -84648 + AT_rich Low_complexity Low_complexity 1 21 0 227 350 0 0 chr5_random 2624181 2624278 -84502 + L1ME LINE L1 531 627 -5903 1906 145 14 3 chr5_random 2624322 2624618 -84162 + AluSx SINE Alu 3 301 -11 1325 256 57 43 chr5_random 2624618 2625197 -83583 + L1ME LINE L1 1316 1902 -4638 4763 258 96 32 chr5_random 2625214 2626370 -82410 + L1MDa LINE L1 17 1098 -5442 2278 118 0 0 chr5_random 2626370 2626676 -82104 + AluSx SINE Alu 1 306 -6 4763 258 96 32 chr5_random 2626676 2626870 -81910 + L1MDa LINE L1 1098 1278 -5262 1888 152 4 0 chr5_random 2626870 2627147 -81633 + AluSx SINE Alu 1 278 -34 4763 258 96 32 chr5_random 2627147 2627814 -80966 + L1MDa LINE L1 1278 2164 -4376 2682 211 65 65 chr5_random 2627814 2628411 -80369 + Charlie1 DNA MER1_type 1443 2039 -722 1706 128 88 0 chr5_random 2628411 2628698 -80082 + AluSx SINE Alu 13 321 0 2682 211 65 65 chr5_random 2628698 2628823 -79957 + Charlie1 DNA MER1_type 2039 2163 -598 243 0 0 0 chr5_random 2628823 2628850 -79930 + (TA)n Simple_repeat Simple_repeat 1 27 0 1993 129 0 0 chr5_random 2628857 2629135 -79645 - AluSg1 SINE Alu -31 278 1 2682 211 65 65 chr5_random 2629135 2629273 -79507 + Charlie1 DNA MER1_type 2168 2314 -447 21 57 0 0 chr5_random 2629407 2629442 -79338 + AT_rich Low_complexity Low_complexity 1 35 0 6400 202 33 30 chr5_random 2629555 2631003 -77777 - Cheshire DNA MER1_type -761 1659 208 3418 146 63 2 chr5_random 2631003 2631593 -77187 + Tigger1 DNA MER2_type 439 1064 -1354 680 167 26 9 chr5_random 2631593 2631707 -77073 + AluJb SINE Alu 2 117 -195 207 0 0 0 chr5_random 2631712 2631735 -77045 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 8049 139 37 11 chr5_random 2631737 2632143 -76637 + Tigger1 DNA MER2_type 1079 1473 -945 1956 127 7 0 chr5_random 2632143 2632434 -76346 + AluSx SINE Alu 1 293 -19 8049 139 37 11 chr5_random 2632434 2633334 -75446 + Tigger1 DNA MER2_type 1473 2418 0 195 265 221 22 chr5_random 2633636 2633817 -74963 + L2 LINE L2 1664 1880 -1434 22 0 0 0 chr5_random 2633830 2633852 -74928 + AT_rich Low_complexity Low_complexity 1 22 0 1837 113 12 4 chr5_random 2633944 2634200 -74580 + AluSq SINE Alu 10 267 -46 2086 139 0 3 chr5_random 2634282 2634583 -74197 + AluSx SINE Alu 1 300 -12 829 148 35 101 chr5_random 2634593 2634762 -74018 + FRAM SINE Alu 1 157 -19 950 197 0 30 chr5_random 2634840 2634977 -73803 + AluJo SINE Alu 1 132 -180 1992 124 7 29 chr5_random 2634977 2635283 -73497 + AluSx SINE Alu 1 299 -13 950 197 0 30 chr5_random 2635283 2635348 -73432 + AluJo SINE Alu 132 197 -115 2000 141 7 0 chr5_random 2635457 2635756 -73024 - AluSp SINE Alu -12 301 1 1146 67 0 0 chr5_random 2635756 2635890 -72890 - AluY SINE Alu -177 134 1 25 31 0 0 chr5_random 2635901 2635933 -72847 + AT_rich Low_complexity Low_complexity 1 32 0 864 96 88 0 chr5_random 2635952 2636077 -72703 + AluSc SINE Alu 160 295 -14 360 190 0 0 chr5_random 2636080 2636138 -72642 + MLT1B LTR MaLR 331 388 -2 28 29 0 0 chr5_random 2636159 2636194 -72586 + AT_rich Low_complexity Low_complexity 1 35 0 1478 172 63 0 chr5_random 2636201 2636439 -72341 - AluJo SINE Alu -59 253 1 1706 176 22 50 chr5_random 2636553 2636911 -71869 + L1PA16 LINE L1 5803 6150 -16 22 56 0 0 chr5_random 2637031 2637067 -71713 + AT_rich Low_complexity Low_complexity 1 36 0 525 289 53 32 chr5_random 2637241 2637431 -71349 - MIR SINE MIR -49 213 20 186 357 71 10 chr5_random 2637452 2637550 -71230 - L2 LINE L2 -9 3263 3160 1972 286 99 45 chr5_random 2637708 2637819 -70961 - L1MDa LINE L1 -4993 1547 1444 1894 152 4 0 chr5_random 2637819 2638096 -70684 - AluSx SINE Alu -34 278 1 1972 286 99 45 chr5_random 2638096 2638290 -70490 - L1MDa LINE L1 -5096 1444 1262 2277 118 0 0 chr5_random 2638290 2638595 -70185 - AluSx SINE Alu -7 305 1 1972 286 99 45 chr5_random 2638595 2639524 -69256 - L1MDa LINE L1 -5278 1262 244 1840 84 15 4 chr5_random 2639524 2639785 -68995 - AluYa5 SINE Alu -2 309 46 6249 61 7 4 chr5_random 2640268 2641322 -67458 - L1P1 LINE L1 -479 5676 4621 299 212 153 0 chr5_random 2642967 2643052 -65728 + MER5A DNA MER1_type 9 106 -83 778 148 0 0 chr5_random 2643192 2643300 -65480 + AluSg/x SINE Alu 186 293 -17 951 101 0 8 chr5_random 2643761 2643890 -64890 + AluSq/x SINE Alu 5 132 -181 1648 101 0 0 chr5_random 2643893 2644110 -64670 + AluY SINE Alu 1 217 -94 399 21 0 0 chr5_random 2645007 2645055 -63725 + (GTTTG)n Simple_repeat Simple_repeat 1 48 0 1999 134 4 0 chr5_random 2645055 2645330 -63450 - AluSx SINE Alu -31 281 6 819 95 9 0 chr5_random 2646049 2646165 -62615 - AluSp/q SINE Alu -20 293 177 344 172 0 54 chr5_random 2646407 2646500 -62280 + AluSg/x SINE Alu 193 280 -20 2076 129 3 0 chr5_random 2646981 2647276 -61504 + AluSq SINE Alu 1 296 -17 1885 162 0 13 chr5_random 2647600 2647914 -60866 + AluJb SINE Alu 3 312 0 1835 127 73 4 chr5_random 2648016 2648291 -60489 + AluSx SINE Alu 5 298 -14 21 57 0 0 chr5_random 2648371 2648406 -60374 + AT_rich Low_complexity Low_complexity 1 35 0 1889 129 16 22 chr5_random 2649643 2649954 -58826 - AluSx SINE Alu -3 309 1 1689 107 138 4 chr5_random 2649954 2650215 -58565 - AluSg SINE Alu -11 299 4 311 198 9 190 chr5_random 2650396 2650512 -58268 - Tigger7 DNA MER2_type -1 2490 2396 190 244 0 0 chr5_random 2650943 2650984 -57796 - MIR SINE MIR -38 224 184 1125 194 0 9 chr5_random 2651306 2651551 -57229 + AluJb SINE Alu 92 312 0 1899 94 77 25 chr5_random 2652110 2652396 -56384 + AluSp SINE Alu 1 301 -12 1413 268 91 20 chr5_random 2652504 2653296 -55484 + L2 LINE L2 2473 3313 0 514 263 140 6 chr5_random 2653310 2653481 -55299 + MLT1L LTR MaLR 414 607 -8 927 173 25 0 chr5_random 2653666 2653828 -54952 - AluJ SINE Alu -18 294 129 1113 201 0 9 chr5_random 2654147 2654361 -54419 - AluJo SINE Alu -11 301 90 358 157 15 25 chr5_random 2654362 2654443 -54337 - AluJo/FLAM SINE Alu -180 122 75 832 150 0 0 chr5_random 2654484 2654597 -54183 - FLAM_A SINE Alu -17 116 4 2073 107 10 3 chr5_random 2654619 2654918 -53862 + AluY SINE Alu 1 301 -10 417 183 14 0 chr5_random 2654918 2654989 -53791 - AluJo/FLAM SINE Alu -191 121 50 1964 142 0 0 chr5_random 2655190 2655472 -53308 + AluSx SINE Alu 1 282 -30 186 43 0 0 chr5_random 2655474 2655497 -53283 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1886 123 33 17 chr5_random 2655954 2656256 -52524 - AluSx SINE Alu -5 307 1 405 181 26 13 chr5_random 2656684 2656839 -51941 + (TAGA)n Simple_repeat Simple_repeat 3 159 0 532 115 64 0 chr5_random 2656964 2657265 -51515 + (TAGA)n Simple_repeat Simple_repeat 1 320 0 638 304 55 5 chr5_random 2657375 2657576 -51204 - MLT1A1 LTR MaLR 0 365 155 273 316 32 0 chr5_random 2657586 2657681 -51099 - MLT1A2 LTR MaLR -98 276 179 313 239 15 0 chr5_random 2657696 2657763 -51017 - MLT1A2 LTR MaLR -98 276 209 2089 125 0 0 chr5_random 2657852 2658243 -50537 - AluSg SINE Alu 0 391 1 237 288 0 0 chr5_random 2658245 2658311 -50469 - MLT1A2 LTR MaLR -210 155 90 1493 219 0 3 chr5_random 2658350 2658642 -50138 - AluJb SINE Alu -15 297 7 188 35 35 0 chr5_random 2658674 2658703 -50077 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2074 111 4 0 chr5_random 2658710 2658989 -49791 - AluSx SINE Alu -26 286 7 2341 95 0 16 chr5_random 2659011 2659328 -49452 - AluSx SINE Alu 0 312 1 2238 92 0 49 chr5_random 2659572 2659899 -48881 - AluY SINE Alu 0 311 1 1764 119 7 34 chr5_random 2659909 2660203 -48577 - AluSg SINE Alu -24 286 1 417 139 42 0 chr5_random 2660206 2660278 -48502 - AluSg/x SINE Alu -17 293 219 2453 78 0 3 chr5_random 2660389 2660696 -48084 - AluY SINE Alu 0 311 6 2235 80 3 49 chr5_random 2660700 2661026 -47754 - AluY SINE Alu 0 311 1 204 40 0 0 chr5_random 2661707 2661732 -47048 + (GA)n Simple_repeat Simple_repeat 1 25 0 2080 97 7 45 chr5_random 2661743 2662052 -46728 + AluSx SINE Alu 1 297 -15 444 168 43 31 chr5_random 2662147 2662659 -46121 + (TAGA)n Simple_repeat Simple_repeat 1 518 0 203 149 54 0 chr5_random 2662678 2662752 -46028 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 450 163 34 7 chr5_random 2662779 2662926 -45854 + (TAGA)n Simple_repeat Simple_repeat 1 151 0 180 189 40 0 chr5_random 2662940 2663014 -45766 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 408 177 34 7 chr5_random 2663041 2663188 -45592 + (TAGA)n Simple_repeat Simple_repeat 1 151 0 439 166 35 12 chr5_random 2663211 2663380 -45400 + (TAGA)n Simple_repeat Simple_repeat 3 175 0 484 143 52 0 chr5_random 2663392 2663546 -45234 + (TAGA)n Simple_repeat Simple_repeat 4 165 0 451 173 37 23 chr5_random 2663586 2663934 -44846 + (TAGA)n Simple_repeat Simple_repeat 1 353 0 550 144 39 8 chr5_random 2663958 2664225 -44555 + (TAGA)n Simple_repeat Simple_repeat 1 275 0 542 147 45 0 chr5_random 2664249 2664406 -44374 + (TAGA)n Simple_repeat Simple_repeat 4 167 0 434 171 24 18 chr5_random 2664458 2664628 -44152 + (TAGA)n Simple_repeat Simple_repeat 1 171 0 470 132 63 0 chr5_random 2664682 2664841 -43939 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 288 0 0 0 chr5_random 2666128 2666160 -42620 + (TG)n Simple_repeat Simple_repeat 1 32 0 782 248 99 11 chr5_random 2667065 2667347 -41433 + L2 LINE L2 2844 3150 -163 1613 214 0 3 chr5_random 2667808 2668107 -40673 - AluJb SINE Alu -14 298 1 6558 178 91 12 chr5_random 2668743 2669623 -39157 + L1MA3 LINE L1 3418 4227 -2078 2331 88 0 7 chr5_random 2669623 2669919 -38861 - AluY SINE Alu -16 295 2 6558 178 91 12 chr5_random 2669919 2671362 -37418 + L1MA3 LINE L1 4227 5937 -368 248 287 0 32 chr5_random 2672064 2672158 -36622 - MLT1K LTR MaLR -28 560 470 381 137 32 24 chr5_random 2672182 2672306 -36474 + (TAGA)n Simple_repeat Simple_repeat 1 125 0 868 91 25 36 chr5_random 2672325 2672686 -36094 + (TAGA)n Simple_repeat Simple_repeat 1 358 0 677 301 68 31 chr5_random 2672733 2673085 -35695 - MLT1J LTR MaLR -45 466 102 1813 181 0 3 chr5_random 2673847 2674145 -34635 + AluJb SINE Alu 1 297 -15 199 93 0 56 chr5_random 2674155 2674209 -34571 + (CAAAAA)n Simple_repeat Simple_repeat 6 56 0 598 331 158 32 chr5_random 2674427 2674985 -33795 + L2 LINE L2 2080 2707 -607 1372 167 114 22 chr5_random 2675082 2675241 -33539 + MLT1A2 LTR MaLR 21 164 -210 231 36 0 0 chr5_random 2675241 2675269 -33511 + (TC)n Simple_repeat Simple_repeat 2 29 0 1372 167 114 22 chr5_random 2675269 2675433 -33347 + MLT1A2 LTR MaLR 164 374 0 1427 237 24 53 chr5_random 2675774 2676267 -32513 - MLT1D LTR MaLR -6 499 21 274 149 43 0 chr5_random 2676298 2676345 -32435 - MLT1D LTR MaLR -455 50 2 272 167 42 0 chr5_random 2676395 2676443 -32337 - MLT1J LTR MaLR -455 50 1 346 62 42 0 chr5_random 2676444 2676492 -32288 - MLT1D LTR MaLR -455 50 1 325 64 43 0 chr5_random 2676493 2676540 -32240 - MLT1D LTR MaLR -455 50 2 308 104 42 0 chr5_random 2676542 2676590 -32190 - MLT1D LTR MaLR -455 50 1 315 83 42 0 chr5_random 2676591 2676639 -32141 - MLT1D LTR MaLR -455 50 1 302 104 42 0 chr5_random 2676640 2676688 -32092 - MLT1D LTR MaLR -455 50 1 275 133 44 0 chr5_random 2676689 2676734 -32046 - MLT1D LTR MaLR -456 49 3 300 125 42 0 chr5_random 2676737 2676785 -31995 - MLT1D LTR MaLR -455 50 1 302 125 42 0 chr5_random 2676786 2676834 -31946 - MLT1D LTR MaLR -455 50 1 343 64 43 0 chr5_random 2676883 2676930 -31850 - MLT1D LTR MaLR -456 49 1 287 128 43 0 chr5_random 2676931 2676978 -31802 - MLT1D LTR MaLR -456 49 1 337 83 42 0 chr5_random 2676979 2677027 -31753 - MLT1D LTR MaLR -455 50 1 322 104 42 0 chr5_random 2677028 2677076 -31704 - MLT1D LTR MaLR -455 50 1 239 137 39 59 chr5_random 2677077 2677128 -31652 - MLT1D LTR MaLR -455 50 1 326 85 43 0 chr5_random 2677129 2677176 -31604 - MLT1D LTR MaLR -455 50 2 552 55 0 0 chr5_random 2677572 2677645 -31135 + L1PA3 LINE L1 6080 6152 -3 2323 128 0 0 chr5_random 2677797 2678180 -30600 - L1PA8 LINE L1 -80 6092 5710 1230 68 0 0 chr5_random 2678384 2678530 -30250 + AluSg SINE Alu 1 146 -164 372 36 55 0 chr5_random 2678532 2678587 -30193 - L1PA7 LINE L1 -329 5825 5768 963 125 6 12 chr5_random 2678587 2678747 -30033 + L1PA13 LINE L1 5993 6151 -12 199 49 49 24 chr5_random 2678750 2678791 -29989 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 1026 74 74 0 chr5_random 2678791 2678926 -29854 + AluSg/x SINE Alu 157 301 -9 1912 150 0 0 chr5_random 2679194 2679480 -29300 - AluSx SINE Alu -19 293 8 2048 141 0 16 chr5_random 2679512 2679824 -28956 - AluSx SINE Alu -5 307 1 896 138 50 0 chr5_random 2679825 2679984 -28796 - L1PA13 LINE L1 -229 5934 5768 921 138 6 12 chr5_random 2679984 2680144 -28636 + L1PA13 LINE L1 5993 6151 -12 378 190 0 0 chr5_random 2680237 2680353 -28427 + C-rich Low_complexity Low_complexity 1 116 0 2218 97 10 0 chr5_random 2681109 2681407 -27373 - AluY SINE Alu -10 301 1 1856 125 0 39 chr5_random 2681488 2681793 -26987 - AluY SINE Alu -8 303 11 609 128 147 10 chr5_random 2681877 2682006 -26774 - AluSg/x SINE Alu 0 312 170 498 209 31 23 chr5_random 2682007 2682136 -26644 - L1PA16 LINE L1 -46 6120 5991 1424 189 55 46 chr5_random 2682164 2682471 -26309 - AluJo SINE Alu -2 310 1 1033 171 25 49 chr5_random 2682521 2682766 -26014 - L1PA16 LINE L1 -136 6030 5792 251 127 0 18 chr5_random 2683158 2683213 -25567 + (TG)n Simple_repeat Simple_repeat 2 55 0 2052 83 4 11 chr5_random 2683215 2683492 -25288 - AluY SINE Alu -36 275 1 1749 104 8 0 chr5_random 2683494 2683734 -25046 - AluSq SINE Alu -17 296 55 3312 149 30 14 chr5_random 2683959 2684583 -24197 + Tigger1 DNA MER2_type 1785 2418 0 1824 124 11 8 chr5_random 2685184 2685450 -23330 + AluSq SINE Alu 1 267 -46 2055 147 0 3 chr5_random 2685531 2685831 -22949 + AluSx SINE Alu 1 299 -13 745 152 37 104 chr5_random 2685841 2686005 -22775 + FRAM SINE Alu 1 152 -24 1488 200 7 46 chr5_random 2686088 2686225 -22555 + AluJo SINE Alu 1 142 -170 2019 129 6 29 chr5_random 2686225 2686536 -22244 + AluSx SINE Alu 1 304 -8 2066 147 0 0 chr5_random 2686539 2686852 -21928 + AluSq SINE Alu 1 313 0 1488 200 7 46 chr5_random 2686852 2687015 -21765 + AluJo SINE Alu 144 293 -19 274 254 51 0 chr5_random 2687442 2687501 -21279 - L2 LINE L2 0 3313 3252 1023 159 17 100 chr5_random 2687544 2687783 -20997 + MER20 DNA MER1_type 1 219 0 456 314 55 30 chr5_random 2688931 2689259 -19521 + L1ME LINE L1 5483 5818 -303 231 36 0 0 chr5_random 2689410 2689438 -19342 + (TG)n Simple_repeat Simple_repeat 1 28 0 682 230 127 24 chr5_random 2689922 2690135 -18645 + MIR SINE MIR 17 251 -11 216 167 0 0 chr5_random 2690317 2690365 -18415 + (TG)n Simple_repeat Simple_repeat 2 49 0 1847 216 103 44 chr5_random 2690863 2691617 -17163 + L1MC5 LINE L1 6962 7760 -201 2143 111 7 0 chr5_random 2691618 2691907 -16873 + AluSx SINE Alu 1 291 -21 448 194 185 104 chr5_random 2691927 2692138 -16642 + MIR SINE MIR 19 246 -16 244 172 31 78 chr5_random 2692139 2692203 -16577 - MIR SINE MIR -56 152 92 657 184 141 44 chr5_random 2692243 2692449 -16331 + MLT1J2 LTR MaLR 2 227 -223 334 262 172 33 chr5_random 2692577 2692699 -16081 - MIR SINE MIR -106 156 18 183 171 86 100 chr5_random 2692680 2692750 -16030 - MIR SINE MIR -146 116 48 * 37 0 0 0 chr5_random 2692994 2693031 -15749 + AT_rich Low_complexity Low_complexity 1 37 0 2501 61 3 3 chr5_random 2693269 2693580 -15200 - AluY SINE Alu 0 311 1 932 8 25 8 chr5_random 2694234 2694354 -14426 - AluYa5/8 SINE Alu -189 122 1 762 251 21 17 chr5_random 2694355 2694590 -14190 - L1MDa LINE L1 -6288 252 17 1064 269 54 39 chr5_random 2694615 2695187 -13593 - L1MDa LINE L1 -4644 1896 1316 1928 145 14 3 chr5_random 2695187 2695483 -13297 - AluSx SINE Alu -11 301 3 324 340 0 0 chr5_random 2695527 2695624 -13156 - L1MDa LINE L1 -5903 627 531 1197 250 70 39 chr5_random 2695704 2696969 -11811 - L1ME1 LINE L1 -1 6165 4768 551 262 65 60 chr5_random 2698621 2698988 -9792 - L1ME3A LINE L1 -132 6038 5670 2233 121 0 13 chr5_random 2699025 2699339 -9441 - AluSx SINE Alu 0 312 3 324 268 188 7 chr5_random 2699456 2699594 -9186 + MIR SINE MIR 43 205 -57 2233 126 0 0 chr5_random 2699602 2699912 -8868 - AluSx SINE Alu -1 311 2 1067 228 143 105 chr5_random 2700577 2700813 -7967 - MLT1E2 LTR MaLR -2 624 398 2252 96 3 22 chr5_random 2700813 2701126 -7654 - AluSc SINE Alu -2 307 1 1067 228 143 105 chr5_random 2701126 2701517 -7263 - MLT1E2 LTR MaLR -228 398 1 838 150 34 7 chr5_random 2702809 2702956 -5824 - MSTA LTR MaLR -9 417 267 1257 114 6 0 chr5_random 2702956 2703132 -5648 + AluSq SINE Alu 134 310 -3 1233 175 82 16 chr5_random 2703150 2703407 -5373 - MSTA LTR MaLR -154 274 1 405 322 53 34 chr5_random 2703572 2703780 -5000 - HAL1 LINE L1 -891 1616 1405 205 236 0 55 chr5_random 2703891 2703946 -4834 + MIR3 SINE MIR 110 161 -47 229 269 34 17 chr5_random 2704015 2704134 -4646 - HAL1 LINE L1 -1253 1254 1134 1894 168 0 10 chr5_random 2704649 2704952 -3828 - AluJb SINE Alu -12 300 1 29 28 0 0 chr5_random 2705014 2705050 -3730 + AT_rich Low_complexity Low_complexity 1 36 0 1549 85 0 0 chr5_random 2705975 2706164 -2616 - AluY SINE Alu -117 194 6