1992 145 26 83 chr2 0 56 -253256527 - L1MA5 LINE L1 -3 6297 6239 1653 120 13 0 chr2 56 281 -253256302 - AluSq SINE Alu -85 228 1 1992 145 26 83 chr2 281 345 -253256238 - L1MA5 LINE L1 -61 6239 6173 423 0 0 0 chr2 345 392 -253256191 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1992 145 26 83 chr2 392 406 -253256177 - L1MA5 LINE L1 -127 6173 6160 1887 143 0 0 chr2 406 679 -253255904 - AluJb SINE Alu -28 284 12 1992 145 26 83 chr2 679 962 -253255621 - L1MA5 LINE L1 -140 6160 5902 1408 212 54 25 chr2 954 1282 -253255301 - L1M2 LINE L1 -4504 2345 2001 * 2186 72 0 0 chr2 1282 1545 -253255038 - AluY SINE Alu -48 263 1 1408 212 54 25 chr2 1545 1622 -253254961 - L1M2 LINE L1 -4848 2001 1928 780 195 0 0 chr2 1727 1855 -253254728 - FLAM_C SINE Alu -13 130 3 520 216 147 0 chr2 3471 3535 -253253048 - MER94 DNA DNA -1 133 80 2066 120 17 0 chr2 3535 3827 -253252756 - AluSx SINE Alu -15 297 1 520 216 147 0 chr2 3827 3878 -253252705 - MER94 DNA DNA -54 80 1 372 235 45 45 chr2 3884 4016 -253252567 + MIR3 SINE MIR 68 199 -9 31 0 0 0 chr2 8080 8111 -253248472 + AT_rich Low_complexity Low_complexity 1 31 0 196 321 46 18 chr2 8204 8313 -253248270 - L3b LINE CR1 -204 1379 1268 743 242 107 115 chr2 10223 10735 -253245848 + MLT1H LTR MaLR 42 549 0 2264 173 89 30 chr2 11097 11570 -253245013 + MLT1D LTR MaLR 5 505 0 377 270 59 26 chr2 11927 12079 -253244504 + MER67A LTR ERV1 387 543 0 1481 178 3 38 chr2 12760 13052 -253243531 - AluJo SINE Alu -18 294 13 273 322 16 16 chr2 13203 13324 -253243259 - MLT1H LTR MaLR -387 162 42 461 188 31 10 chr2 13659 13755 -253242828 + MER4A LTR ERV1 1 98 -566 1594 143 27 79 chr2 13755 14119 -253242464 + MER4A LTR ERV1 261 664 0 2696 118 3 6 chr2 15360 15725 -253240858 - THE1B LTR MaLR 0 364 1 11490 113 33 3 chr2 15725 17258 -253239325 - THE1B-int LTR MaLR 0 1580 1 2541 126 14 16 chr2 17258 17623 -253238960 - THE1B LTR MaLR 0 364 1 1844 135 0 82 chr2 18927 19246 -253237337 - MER4A LTR ERV1 0 664 372 264 263 197 0 chr2 19481 19618 -253236965 + MIR SINE MIR 32 195 -67 566 274 48 84 chr2 19894 20252 -253236331 - MLT1J1 LTR MaLR -37 409 65 286 309 40 24 chr2 21512 21638 -253234945 - L1ME3A LINE L1 -8 6162 6035 2071 231 57 19 chr2 21663 22186 -253234397 - MER90 LTR ERV1 0 614 72 200 295 90 41 chr2 23800 23922 -253232661 + MIR SINE MIR 20 147 -115 198 286 16 32 chr2 24001 24064 -253232519 + MIR3 SINE MIR 130 191 -17 197 275 0 0 chr2 24269 24309 -253232274 - L2 LINE L2 -14 3258 3219 * 239 313 153 14 chr2 24304 24448 -253232135 - MIR SINE MIR -93 169 6 1719 166 32 32 chr2 26067 26375 -253230208 + AluJo SINE Alu 1 308 -4 22 56 0 0 chr2 26456 26492 -253230091 + AT_rich Low_complexity Low_complexity 1 36 0 853 229 143 48 chr2 26493 26829 -253229754 - L1MC4 LINE L1 -437 7605 7238 1748 259 12 79 chr2 26831 27143 -253229440 - L1MC4a LINE L1 -803 7005 6674 1527 205 3 7 chr2 27143 27426 -253229157 + AluJo SINE Alu 1 282 -30 1748 259 12 79 chr2 27426 27533 -253229050 - L1MC4a LINE L1 -1134 6674 6635 342 0 0 0 chr2 27533 27571 -253229012 + (CA)n Simple_repeat Simple_repeat 2 39 0 1748 259 12 79 chr2 27571 27744 -253228839 - L1MC4a LINE L1 -1173 6635 6452 291 252 9 19 chr2 28247 28354 -253228229 + (TA)n Simple_repeat Simple_repeat 1 106 0 28 61 0 0 chr2 28412 28461 -253228122 + AT_rich Low_complexity Low_complexity 1 49 0 315 276 123 58 chr2 29005 29248 -253227335 + L1M4 LINE L1 2917 3175 -2971 880 228 106 26 chr2 29265 29577 -253227006 + L1M4 LINE L1 2142 2478 -3668 1652 138 0 0 chr2 29587 29826 -253226757 + L1P3 LINE L1 10 248 -6213 4742 131 58 99 chr2 29826 31256 -253225327 + pTR5 LTR ERV1 742 2433 -5 11163 107 15 14 chr2 31257 33063 -253223520 + L1P3 LINE L1 238 2041 -4420 3440 200 31 71 chr2 33063 34073 -253222510 + LTR5 LTR ERVK 1 969 0 11163 107 15 14 chr2 34073 34515 -253222068 + L1P3 LINE L1 2041 2499 -3962 22626 97 11 1 chr2 34515 38410 -253218173 + L1PA7 LINE L1 2254 6154 0 11163 107 15 14 chr2 38410 38444 -253218139 + L1P3 LINE L1 2499 2531 -3930 2023 61 4 8 chr2 38576 38838 -253217745 + AluY SINE Alu 34 294 -17 553 317 107 26 chr2 39186 39480 -253217103 - L2 LINE L2 -6 3307 3038 1628 122 35 8 chr2 39480 39735 -253216848 + AluSx SINE Alu 44 305 -7 553 317 107 26 chr2 39735 39959 -253216624 - L2 LINE L2 -275 3038 2742 24 53 0 0 chr2 40812 40850 -253215733 + AT_rich Low_complexity Low_complexity 1 38 0 349 350 106 0 chr2 41201 41381 -253215202 + MIR SINE MIR 49 247 -15 4491 172 86 19 chr2 41486 42520 -253214063 - L1MA4A LINE L1 -23 6982 5880 * 12065 197 19 11 chr2 42515 45098 -253211485 - L1MA4A LINE L1 -1221 5627 3022 10227 215 67 27 chr2 45426 46328 -253210255 - L1MA4A LINE L1 -3811 3037 2172 2103 121 3 0 chr2 46328 46618 -253209965 - AluSx SINE Alu -21 291 1 10227 215 67 27 chr2 46618 48437 -253208146 - L1MA4A LINE L1 -4676 2172 208 317 82 20 0 chr2 48689 48738 -253207845 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr2 49518 49544 -253207039 + AT_rich Low_complexity Low_complexity 1 26 0 226 296 101 16 chr2 49764 50011 -253206572 + L1ME4a LINE L1 5820 6087 -34 502 250 101 60 chr2 50508 50756 -253205827 - MIR SINE MIR 0 262 5 2315 103 0 0 chr2 51102 51402 -253205181 - AluSx SINE Alu -12 300 1 291 293 0 40 chr2 52047 52122 -253204461 + L2 LINE L2 3181 3252 -20 287 263 64 99 chr2 52543 52714 -253203869 - L3 LINE CR1 -350 1227 1063 2266 112 3 0 chr2 52906 53209 -253203374 + AluSx SINE Alu 1 304 -8 281 333 24 56 chr2 53224 53350 -253203233 + L2 LINE L2 3116 3237 -35 195 301 60 48 chr2 53516 53599 -253202984 - MIR SINE MIR -168 94 11 264 207 261 27 chr2 54790 54901 -253201682 + L2 LINE L2 3136 3272 0 2273 90 3 7 chr2 55311 55612 -253200971 + AluSc SINE Alu 1 300 -9 545 300 77 66 chr2 55723 56073 -253200510 - L2 LINE L2 -368 2946 2593 3759 227 55 2 chr2 56074 56923 -253199660 - MER45B DNA AcHobo -145 895 2 1543 208 5 49 chr2 56981 57191 -253199392 + Charlie4a DNA MER1_type 67 250 -1711 2060 111 7 24 chr2 57191 57489 -253199094 + AluSg SINE Alu 1 293 -17 1543 208 5 49 chr2 57489 57705 -253198878 + Charlie4a DNA MER1_type 250 474 -34 554 259 228 4 chr2 57724 57983 -253198600 - L2 LINE L2 -2959 355 39 318 218 45 115 chr2 58384 58457 -253198126 - HAL1 LINE L1 -1588 919 861 1939 117 28 14 chr2 58457 58748 -253197835 + AluSx SINE Alu 1 295 -17 318 218 45 115 chr2 58748 58830 -253197753 - HAL1 LINE L1 -1646 861 775 221 298 0 0 chr2 59532 59589 -253196994 + MER5B DNA MER1_type 122 178 0 492 229 144 8 chr2 60204 60322 -253196261 - MER94 DNA DNA 0 134 1 654 242 88 16 chr2 60660 60854 -253195729 - MIR SINE MIR -2 260 53 310 302 100 83 chr2 60954 61364 -253195219 - L2 LINE L2 -3 3269 2853 225 0 0 0 chr2 61470 61495 -253195088 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 335 252 93 0 chr2 64313 64420 -253192163 + MIR SINE MIR 100 216 -46 409 213 87 47 chr2 64442 64569 -253192014 - MIR SINE MIR -124 138 7 7411 54 5 13 chr2 65185 66662 -253189921 + SVA Other Other 1 1386 0 277 371 60 22 chr2 66778 67010 -253189573 - MIR SINE MIR -1 261 21 4387 189 9 40 chr2 67848 68848 -253187735 - L1 LINE L1 -1055 5091 4123 197 132 26 0 chr2 69017 69055 -253187528 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 573 270 20 14 chr2 69676 69824 -253186759 + MER5B DNA MER1_type 30 178 0 1921 169 3 3 chr2 69938 70246 -253186337 - AluJo SINE Alu -4 308 1 2148 103 3 0 chr2 71659 71941 -253184642 + AluSp SINE Alu 2 284 -29 1613 208 3 3 chr2 72110 72422 -253184161 + AluJb SINE Alu 1 312 0 336 222 247 31 chr2 72531 72693 -253183890 + L1ME3A LINE L1 5612 5808 -354 239 200 46 31 chr2 72722 72787 -253183796 - LTR43 LTR ERV1 -24 578 513 959 266 50 16 chr2 72875 73195 -253183388 - LTR43 LTR ERV1 -141 461 131 998 209 59 62 chr2 73276 73615 -253182968 + L1ME3A LINE L1 5825 6162 -8 3698 148 26 11 chr2 74109 74717 -253181866 + L1MC1 LINE L1 5709 6325 -8 2678 99 79 27 chr2 74718 75060 -253181523 + MSTA LTR MaLR 1 369 -59 1830 144 27 27 chr2 75060 75359 -253181224 + AluSx SINE Alu 1 299 -13 2678 99 79 27 chr2 75359 75421 -253181162 + MSTA LTR MaLR 369 426 -2 2454 208 73 7 chr2 76767 77333 -253179250 - L1MA9 LINE L1 -539 5773 5166 1922 181 20 75 chr2 77326 77834 -253178749 + L1MA9 LINE L1 5803 6282 -30 * 22 0 0 0 chr2 77834 77856 -253178727 + AT_rich Low_complexity Low_complexity 1 22 0 1157 218 20 110 chr2 77918 78317 -253178266 + MLT1A1 LTR MaLR 1 363 -2 2344 135 114 5 chr2 80626 81012 -253175571 - MSTA LTR MaLR 0 428 1 1931 73 0 8 chr2 81367 81614 -253174969 + AluY SINE Alu 54 298 -13 32 75 0 0 chr2 82008 82075 -253174508 + AT_rich Low_complexity Low_complexity 1 67 0 1804 87 0 0 chr2 82080 82310 -253174273 - PABL_A LTR ERV1 -430 230 1 10992 77 15 1 chr2 82310 83724 -253172859 - PABL_A-int LTR ERV1 0 5015 3583 198 208 188 0 chr2 83975 84023 -253172560 - L2 LINE L2 -249 3023 2967 270 247 0 55 chr2 84042 84115 -253172468 + L2 LINE L2 3242 3310 -3 312 291 81 12 chr2 84238 84410 -253172173 - L1MEc LINE L1 -4976 1587 1404 720 188 0 99 chr2 84478 84659 -253171924 + Tigger1 DNA MER2_type 1 163 -2255 * 1236 156 24 5 chr2 84641 84853 -253171730 + Tigger1 DNA MER2_type 2203 2418 0 7310 223 52 31 chr2 84853 84916 -253171667 - L1MEc LINE L1 -1913 4469 4409 2269 105 20 0 chr2 84916 85220 -253171363 - AluSp SINE Alu -3 310 1 7310 223 52 31 chr2 85220 85864 -253170719 - L1MEc LINE L1 -1973 4409 3780 192 77 0 0 chr2 85864 85890 -253170693 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7310 223 52 31 chr2 85890 86784 -253169799 - L1MEc LINE L1 -2602 3780 2811 2187 170 31 0 chr2 86784 87137 -253169446 - THE1B LTR MaLR 0 364 1 7310 223 52 31 chr2 87137 87605 -253168978 - L1MEc LINE L1 -3571 2811 2354 2451 162 42 50 chr2 87609 88091 -253168492 + MER44D DNA MER2_type 4 481 -224 2371 136 48 112 chr2 88114 88778 -253167805 + MER4A LTR ERV1 1 465 0 1280 168 52 22 chr2 88780 89012 -253167571 + MER44D DNA MER2_type 479 589 -16 421 214 44 13 chr2 89016 89176 -253167407 - L1MEc LINE L1 -4018 2365 2202 671 91 10 20 chr2 89185 89284 -253167299 + MER4A LTR ERV1 1 98 -566 1649 103 45 91 chr2 89284 89646 -253166937 + MER4A LTR ERV1 261 664 0 328 255 41 0 chr2 89646 89744 -253166839 - L1MEc LINE L1 -4190 2194 2093 597 265 180 51 chr2 90523 90995 -253165588 - L1MEc LINE L1 -5381 991 459 538 166 32 35 chr2 91029 91184 -253165399 + MER51A LTR ERV1 1 154 -223 1631 174 46 10 chr2 91186 91490 -253165093 + MER51B LTR ERV1 63 377 0 330 242 74 34 chr2 91609 91758 -253164825 - HAL1b LINE L1 0 1348 1194 1210 65 130 0 chr2 92366 92535 -253164048 - LTR17 LTR ERV1 -2 778 588 898 85 0 0 chr2 92551 92669 -253163914 + AluY SINE Alu 187 304 -7 4898 67 0 3 chr2 92669 93269 -253163314 - LTR17 LTR ERV1 -182 598 1 2403 65 0 0 chr2 93269 93560 -253163023 - HERV17 LTR ERV1 0 8626 8336 303 98 0 0 chr2 93550 93591 -253162992 - HERV17 LTR ERV1 -1077 7549 7509 * 9680 47 10 0 chr2 93583 94731 -253161852 - HERV17 LTR ERV1 -2607 6019 4861 14584 45 4 3 chr2 94833 97002 -253159581 - HERV17 LTR ERV1 -4023 4603 2432 13791 70 17 26 chr2 97001 98835 -253157748 - HERV17 LTR ERV1 -6808 1818 1 * 6348 64 30 5 chr2 98835 99596 -253156987 - LTR17 LTR ERV1 0 780 1 218 340 53 0 chr2 100110 100204 -253156379 - L2 LINE L2 -262 3051 2953 1518 183 7 43 chr2 100827 101128 -253155455 + AluJb SINE Alu 1 290 -22 484 358 29 5 chr2 102674 102878 -253153705 + L3 LINE CR1 1261 1469 -108 7657 52 6 0 chr2 102962 104312 -253152271 + L1PA7 LINE L1 4793 6152 -2 208 308 91 28 chr2 105400 105543 -253151040 + MIR SINE MIR 36 187 -75 4364 192 56 10 chr2 106711 108046 -253148537 + L1MC2 LINE L1 4791 6170 -174 196 270 27 40 chr2 108747 108821 -253147762 + MIR3 SINE MIR 84 156 -52 32 0 0 0 chr2 108911 108943 -253147640 + AT_rich Low_complexity Low_complexity 1 32 0 378 61 0 0 chr2 109715 109764 -253146819 + (CA)n Simple_repeat Simple_repeat 2 50 0 2636 51 0 0 chr2 110276 110587 -253145996 + AluY SINE Alu 1 311 0 233 250 40 13 chr2 110740 110816 -253145767 - HsTC2 DNA Tc2 -1820 78 1 264 269 75 32 chr2 112932 113025 -253143558 + HAL1 LINE L1 806 902 -1605 450 219 0 0 chr2 113144 113249 -253143334 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 713 136 19 0 chr2 113249 113352 -253143231 - AluSx SINE Alu -16 293 189 969 149 0 0 chr2 113352 113493 -253143090 - AluSx SINE Alu -172 141 1 22 0 0 0 chr2 113594 113616 -253142967 + AT_rich Low_complexity Low_complexity 1 22 0 1870 167 17 0 chr2 116057 116356 -253140227 + AluSx SINE Alu 1 304 -8 3196 103 38 0 chr2 117228 117324 -253139259 + L1PB1 LINE L1 5684 5775 -376 182 37 37 0 chr2 117324 117351 -253139232 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 324 0 0 0 chr2 117350 117386 -253139197 + (CA)n Simple_repeat Simple_repeat 2 37 0 3196 103 38 0 chr2 117351 117737 -253138846 + L1PB1 LINE L1 5775 6148 -3 637 307 32 42 chr2 118728 119158 -253137425 + LTR35 LTR ERV1 141 556 0 1559 256 22 24 chr2 119163 119577 -253137006 + LTR35-int LTR ERV1 5 417 -1369 1005 96 0 20 chr2 119585 119731 -253136852 + L1PA4 LINE L1 6012 6154 -1 5983 176 49 36 chr2 119812 121105 -253135478 + LTR57-int LTR ERVL 288 1596 -3747 * 6258 159 79 78 chr2 120157 122450 -253134133 + LTR35-int LTR ERV1 682 4183 -2148 625 135 76 189 chr2 122586 122771 -253133812 + LOR1-int LTR ERV1 3786 3949 -4171 367 93 30 81 chr2 122897 122997 -253133586 + LOR1-int LTR ERV1 4602 4682 -1264 1108 189 5 5 chr2 123001 123191 -253133392 + LOR1-int LTR ERV1 6908 7097 -1023 4043 153 59 22 chr2 123194 123480 -253133103 + MER49 LTR ERV1 1 275 -648 2619 127 16 0 chr2 123480 123849 -253132734 + THE1C LTR MaLR 1 375 0 4043 153 59 22 chr2 123849 124294 -253132289 + MER49 LTR ERV1 275 759 -164 365 282 71 81 chr2 124481 124852 -253131731 + LOR1-int LTR ERV1 4971 7466 -654 736 270 59 55 chr2 125043 125495 -253131088 + LTR35 LTR ERV1 88 556 0 23 0 0 0 chr2 125615 125638 -253130945 + AT_rich Low_complexity Low_complexity 1 23 0 1104 277 108 36 chr2 125792 126290 -253130293 + MLT1E LTR MaLR 52 585 -8 225 0 0 0 chr2 126294 126319 -253130264 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 481 234 70 88 chr2 126335 126562 -253130021 + L1MC4 LINE L1 7820 8042 0 2795 168 25 41 chr2 126677 127194 -253129389 - LTR22 LTR ERVK 0 509 1 819 115 0 0 chr2 127384 127514 -253129069 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 1607 210 49 3 chr2 127840 128187 -253128396 + MLT1A1 LTR MaLR 1 363 -2 331 313 146 18 chr2 128261 128536 -253128047 + L1MEd LINE L1 602 911 -5723 437 295 100 33 chr2 128825 129205 -253127378 + L1MEd LINE L1 1220 1716 -4971 415 323 46 5 chr2 129218 129413 -253127170 + L2 LINE L2 2636 2838 -476 516 253 133 28 chr2 129495 129744 -253126839 + L2 LINE L2 3039 3313 0 26 30 0 0 chr2 131058 131091 -253125492 + AT_rich Low_complexity Low_complexity 1 33 0 305 328 61 22 chr2 131297 131477 -253125106 - MIR SINE MIR -43 219 33 6387 102 48 1 chr2 132128 133055 -253123528 - Tigger1 DNA MER2_type -777 1641 672 605 203 47 20 chr2 133300 133448 -253123135 - L1MC2 LINE L1 -9 6335 6184 376 238 139 112 chr2 134146 134676 -253121907 + L1M2 LINE L1 455 1434 -5415 448 66 0 0 chr2 134886 134947 -253121636 + Alu SINE Alu 235 295 -14 284 62 0 21 chr2 135352 135400 -253121183 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 135618 135657 -253120926 + AT_rich Low_complexity Low_complexity 1 39 0 2252 248 95 11 chr2 135803 136509 -253120074 - L1ME1 LINE L1 -128 6107 5343 1109 213 49 0 chr2 136524 136787 -253119796 - L1MA4 LINE L1 -11 6289 6014 360 271 43 7 chr2 136883 137023 -253119560 - L1ME1 LINE L1 -5000 1396 1252 243 278 47 53 chr2 137103 137314 -253119269 - L1ME LINE L1 -4723 1278 778 475 310 90 29 chr2 137720 138097 -253118486 - L2 LINE L2 -662 2652 2253 21 0 0 0 chr2 138759 138780 -253117803 + AT_rich Low_complexity Low_complexity 1 21 0 1732 188 28 17 chr2 139330 139691 -253116892 + MLT1A1 LTR MaLR 1 365 0 263 28 28 0 chr2 140227 140263 -253116320 + (TAA)n Simple_repeat Simple_repeat 3 39 0 246 269 51 0 chr2 141120 141198 -253115385 - MIR SINE MIR -95 167 86 472 193 11 0 chr2 142486 142574 -253114009 + MER20 DNA MER1_type 129 217 -2 216 226 32 16 chr2 143215 143277 -253113306 - MIR SINE MIR -172 90 28 435 223 48 0 chr2 145221 145324 -253111259 - Charlie2 DNA MER1_type -892 1970 1863 376 365 68 4 chr2 145354 145617 -253110966 - Charlie2 DNA MER1_type -2502 280 1 325 286 20 34 chr2 146387 146534 -253110049 + L1MC4a LINE L1 5296 5440 -681 326 332 50 23 chr2 147255 147604 -253108979 + L1MC4a LINE L1 5531 5819 -302 21 0 0 0 chr2 147612 147633 -253108950 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 147934 147955 -253108628 + (TG)n Simple_repeat Simple_repeat 2 22 0 2878 10 0 0 chr2 149492 149798 -253106785 + AluYa5 SINE Alu 1 306 -5 1451 167 29 8 chr2 150574 150814 -253105769 - AluSx SINE Alu -28 284 40 22 35 0 0 chr2 151244 151273 -253105310 + AT_rich Low_complexity Low_complexity 1 29 0 240 149 0 0 chr2 151522 151569 -253105014 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 2387 70 0 0 chr2 152488 152788 -253103795 - L1PA6 LINE L1 0 6154 5855 234 269 160 9 chr2 152792 153004 -253103579 + L1ME4a LINE L1 5865 6108 -13 187 317 29 10 chr2 154506 154610 -253101973 - MIR SINE MIR 0 262 157 2315 90 10 3 chr2 154921 155221 -253101362 - AluSq SINE Alu -11 302 1 207 266 11 68 chr2 156146 156323 -253100260 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 272 250 64 70 chr2 156349 156509 -253100074 + MIR SINE MIR 58 216 -46 378 316 9 47 chr2 156509 156724 -253099859 + MIR SINE MIR 1 207 -55 1059 182 20 20 chr2 157623 157876 -253098707 + L1MA4 LINE L1 6044 6296 -4 326 220 180 20 chr2 158112 158304 -253098279 + LTR52 LTR ERVL 9 169 -252 378 0 0 0 chr2 158304 158346 -253098237 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 220 180 20 chr2 158346 158398 -253098185 + LTR52 LTR ERVL 169 397 -24 586 231 118 18 chr2 159250 159419 -253097164 + MER105 DNA DNA 1 186 -18 6378 232 63 56 chr2 159756 162766 -253093817 + L1M4b LINE L1 15 3035 -3922 231 36 0 0 chr2 162766 162794 -253093789 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6378 232 63 56 chr2 162794 163671 -253092912 + L1M4b LINE L1 3035 3904 -3053 359 221 132 29 chr2 163676 163812 -253092771 + LTR16A1 LTR ERVL 296 445 -12 222 196 22 0 chr2 163823 163869 -253092714 + MIR SINE MIR 70 116 -146 247 282 155 0 chr2 164297 164400 -253092183 + L1ME LINE L1 5532 5650 -471 21 36 0 0 chr2 164572 164600 -253091983 + AT_rich Low_complexity Low_complexity 1 28 0 285 300 17 33 chr2 165443 165563 -253091020 + MER20 DNA MER1_type 100 217 -2 973 149 6 6 chr2 165732 165907 -253090676 + L1MB2 LINE L1 5288 5462 -721 3651 159 88 45 chr2 165923 167302 -253089281 - pTR5 LTR ERV1 -23 1683 31 1118 227 28 18 chr2 167305 167587 -253088996 + L1MB2 LINE L1 5885 6169 -2 246 128 0 0 chr2 167796 167835 -253088748 + (T)n Simple_repeat Simple_repeat 1 39 0 1660 113 0 0 chr2 167843 168055 -253088528 - AluSg SINE Alu -98 212 1 245 270 261 0 chr2 170733 170848 -253085735 - L1M4 LINE L1 -5477 1157 1013 921 232 161 39 chr2 171339 171899 -253084684 - MER92B LTR ERV1 -8 628 1 217 266 101 0 chr2 175243 175322 -253081261 + L2 LINE L2 3210 3296 -17 200 341 103 48 chr2 175471 175597 -253080986 - L2 LINE L2 -3 3269 3137 213 315 46 8 chr2 176050 176180 -253080403 - MIR SINE MIR -119 143 9 279 236 88 54 chr2 177785 177933 -253078650 - L1MC4a LINE L1 -1424 6384 6232 1333 193 227 14 chr2 178016 178369 -253078214 + MSTA LTR MaLR 1 428 0 416 244 25 10 chr2 179009 179146 -253077437 - L1M4 LINE L1 -5924 710 14 2176 122 140 8 chr2 179541 179919 -253076664 + MSTA LTR MaLR 1 428 0 3688 112 11 53 chr2 180453 181061 -253075522 + MER4B LTR ERV1 1 583 -27 543 101 0 0 chr2 182619 182698 -253073885 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 34467 55 11 14 chr2 182798 187064 -253069519 - HERV17 LTR ERV1 -4377 4249 1 6059 62 30 5 chr2 187064 187825 -253068758 - LTR17 LTR ERV1 0 780 1 1240 226 98 18 chr2 238018 238457 -253018126 + HERV3 LTR ERV1 3412 3960 -976 1587 229 60 86 chr2 238530 239028 -253017555 + HERV3 LTR ERV1 3605 4089 -782 2781 244 2 0 chr2 239128 239657 -253016926 + HERV3 LTR ERV1 1175 1704 -6722 1987 229 11 0 chr2 239756 240127 -253016456 + HERV3 LTR ERV1 1634 2008 -6418 1240 115 6 33 chr2 240127 240310 -253016273 + AluSc SINE Alu 1 178 -131 593 234 14 7 chr2 240411 240552 -253016031 - Tigger1 DNA MER2_type -2275 143 2 673 188 108 5 chr2 240565 240751 -253015832 - L1MCa LINE L1 -3950 2476 2272 752 158 68 15 chr2 240753 240886 -253015697 - AluJ SINE Alu -16 296 157 638 213 41 0 chr2 241014 241136 -253015447 - AluJ SINE Alu -140 172 46 995 175 62 42 chr2 241160 241401 -253015182 - L1MCa LINE L1 -4175 2251 2001 2017 141 0 10 chr2 241401 241699 -253014884 + AluY SINE Alu 1 295 -16 995 175 62 42 chr2 241699 241765 -253014818 - L1MCa LINE L1 -4425 2001 1938 316 26 0 136 chr2 241885 242076 -253014507 + (GGGAGA)n Simple_repeat Simple_repeat 1 165 0 268 261 34 23 chr2 246201 246289 -253010294 - MLT1J2 LTR MaLR 0 450 362 324 316 24 36 chr2 246389 246557 -253010026 - MLT1J1 LTR MaLR -241 205 40 208 146 0 24 chr2 248475 248516 -253008067 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 181 191 43 0 chr2 248793 248840 -253007743 - MIR SINE MIR -66 142 94 485 216 27 20 chr2 249115 249258 -253007325 + MSTC LTR MaLR 20 162 -203 512 244 189 11 chr2 250383 250563 -253006020 + MER20 DNA MER1_type 1 212 -7 362 283 65 62 chr2 252316 252687 -253003896 + L2 LINE L2 2941 3312 -1 4198 213 23 13 chr2 252875 254140 -253002443 + L1MB3 LINE L1 4898 6181 -2 451 299 81 15 chr2 258765 259099 -252997484 - L2 LINE L2 -734 2580 2225 26 0 0 0 chr2 259667 259693 -252996890 + AT_rich Low_complexity Low_complexity 1 26 0 343 267 114 23 chr2 260406 260537 -252996046 + Charlie8 DNA MER1_type 14 156 -2261 25 0 0 0 chr2 260761 260786 -252995797 + AT_rich Low_complexity Low_complexity 1 25 0 1873 150 0 27 chr2 260983 261276 -252995307 + AluJb SINE Alu 1 285 -27 208 237 26 35 chr2 261325 261439 -252995144 + A-rich Low_complexity Low_complexity 3 115 0 296 162 68 14 chr2 261482 261556 -252995027 - MER116 DNA Mariner -2 78 1 762 240 55 87 chr2 261777 262124 -252994459 - MLT1A1 LTR MaLR 0 365 29 4585 188 46 23 chr2 262126 262841 -252993742 - L1 LINE L1 -841 5305 4608 1796 96 46 0 chr2 262841 263081 -252993502 - AluY SINE Alu -20 291 41 4585 188 46 23 chr2 263081 263201 -252993382 - L1 LINE L1 -1538 4608 4492 4987 60 3 8 chr2 263201 263830 -252992753 - L1PA8 LINE L1 -1 6171 5546 4585 188 46 23 chr2 263830 264024 -252992559 - L1 LINE L1 -1654 4492 4248 324 0 0 0 chr2 264024 264060 -252992523 + (TG)n Simple_repeat Simple_repeat 2 37 0 4585 188 46 23 chr2 264060 264096 -252992487 - L1 LINE L1 -1898 4248 4214 1512 161 59 3 chr2 264232 264554 -252992029 - L1 LINE L1 -2437 3709 3370 983 267 64 20 chr2 264563 264953 -252991630 - L1 LINE L1 -3090 3056 2650 185 229 82 0 chr2 265213 265274 -252991309 + MIR SINE MIR 47 112 -150 1554 199 7 34 chr2 266416 266712 -252989871 - AluJb SINE Alu -24 288 1 10643 93 68 11 chr2 267450 269476 -252987107 - L1PBa LINE L1 -3938 2925 634 1295 152 0 0 chr2 269476 269674 -252986909 - L1PBa LINE L1 -6663 200 3 261 83 0 0 chr2 270913 270949 -252985634 + (TA)n Simple_repeat Simple_repeat 1 36 0 470 228 179 55 chr2 271804 272062 -252984521 - MLT1H LTR MaLR 0 549 314 1277 239 38 11 chr2 272147 272591 -252983992 + L1ME2 LINE L1 2121 2576 -3570 5331 255 91 37 chr2 272600 274409 -252982174 + L1ME2 LINE L1 2835 4544 -1620 6107 23 0 10 chr2 274409 275116 -252981467 + L1PA3 LINE L1 5452 6151 -4 5331 255 91 37 chr2 275116 276363 -252980220 + L1ME2 LINE L1 4544 6064 -100 1333 241 95 28 chr2 276363 276836 -252979747 + MLT1D LTR MaLR 1 505 0 5331 255 91 37 chr2 276836 276905 -252979678 + L1ME2 LINE L1 6064 6128 -36 2525 117 14 3 chr2 277256 277616 -252978967 + THE1B LTR MaLR 1 364 0 9795 116 38 38 chr2 277616 279196 -252977387 + THE1B-int LTR MaLR 1 1580 0 2239 124 74 0 chr2 279196 279535 -252977048 + THE1B LTR MaLR 1 364 0 225 203 72 29 chr2 279671 279740 -252976843 + L1ME2 LINE L1 6057 6128 -36 21 57 0 0 chr2 279851 279886 -252976697 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 281586 281609 -252974974 + AT_rich Low_complexity Low_complexity 1 23 0 1171 125 0 0 chr2 281843 282003 -252974580 - AluSg/x SINE Alu -16 294 135 1169 284 51 19 chr2 282403 282928 -252973655 + HAL1 LINE L1 799 1340 -1167 298 287 81 23 chr2 283179 283353 -252973230 + HAL1 LINE L1 2019 2202 -305 995 251 95 10 chr2 283614 283909 -252972674 + MER82 DNA MER2_type 306 625 -28 513 209 98 20 chr2 284414 284567 -252972016 - L1MB5 LINE L1 0 6174 6010 569 278 17 26 chr2 284575 284805 -252971778 + HAL1 LINE L1 1019 1246 -1261 4550 204 73 75 chr2 284905 286459 -252970124 - L1M4 LINE L1 -848 5298 3749 242 299 0 31 chr2 287571 287668 -252968915 + CT-rich Low_complexity Low_complexity 3 96 0 1755 157 14 17 chr2 288860 289154 -252967429 + AluJo SINE Alu 2 294 -18 5132 163 31 31 chr2 289478 290192 -252966391 - L1MA8 LINE L1 -4 6287 5573 2139 125 0 0 chr2 290192 290489 -252966094 + AluSx SINE Alu 1 297 -15 5132 163 31 31 chr2 290489 291022 -252965561 - L1MA8 LINE L1 -717 5574 5042 2341 186 28 24 chr2 291023 291491 -252965092 + L1MA8 LINE L1 4567 5036 -1110 21 0 0 0 chr2 291499 291520 -252965063 + AT_rich Low_complexity Low_complexity 1 21 0 1025 190 22 0 chr2 291568 291747 -252964836 - AluJb SINE Alu -3 309 127 809 278 69 39 chr2 292199 292606 -252963977 + L1ME4a LINE L1 5502 5920 -201 198 171 0 0 chr2 292841 292882 -252963701 + (TTA)n Simple_repeat Simple_repeat 2 42 0 358 238 48 55 chr2 293483 293671 -252962912 - MLT1A2 LTR MaLR -181 209 7 3045 148 30 0 chr2 294242 294748 -252961835 - L1MA4A LINE L1 0 6303 5783 249 266 0 0 chr2 294748 294842 -252961741 + (TG)n Simple_repeat Simple_repeat 2 95 0 1063 156 14 46 chr2 294845 295063 -252961520 - L1MA4A LINE L1 -514 5789 5579 260 245 21 32 chr2 296262 296356 -252960227 + L1ME3A LINE L1 5348 5440 -681 2168 144 69 15 chr2 297377 297781 -252958802 + MSTA LTR MaLR 1 426 -2 256 343 35 47 chr2 299652 299993 -252956590 + L1ME3A LINE L1 5609 5945 -225 239 261 14 0 chr2 300345 300414 -252956169 - MER5A DNA MER1_type -84 105 36 227 270 0 0 chr2 300508 300571 -252956012 + L1P LINE L1 4940 5002 -1144 703 271 171 39 chr2 300776 301395 -252955188 + L1MC4a LINE L1 5267 5967 -1841 1512 233 30 30 chr2 301535 301995 -252954588 - MLT1C LTR MaLR -2 465 6 333 194 32 0 chr2 302070 302132 -252954451 - AluJ/FLAM SINE Alu -216 86 23 531 256 70 44 chr2 302719 302989 -252953594 - MER97a DNA MER1_type? -16 878 602 845 106 12 32 chr2 302991 303235 -252953348 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 722 167 13 51 chr2 303263 303419 -252953164 - FRAM SINE Alu 0 176 27 721 246 99 9 chr2 303463 303695 -252952888 - MER97b DNA MER1_type? -780 273 21 276 30 0 0 chr2 304051 304084 -252952499 + (TTA)n Simple_repeat Simple_repeat 2 34 0 181 211 0 0 chr2 305994 306032 -252950551 - MIR SINE MIR -67 141 104 669 213 35 0 chr2 306157 306298 -252950285 + MER20 DNA MER1_type 5 150 -69 440 247 283 11 chr2 306303 306586 -252949997 - MER57A LTR ERV1 -2 401 42 198 407 12 0 chr2 307325 307406 -252949177 + L2 LINE L2 3187 3268 -4 1267 191 100 16 chr2 308598 308918 -252947665 + MLT2C1 LTR ERVL 3 349 -48 467 182 30 0 chr2 310227 310326 -252946257 - MLT2C1 LTR ERVL -295 102 1 444 206 178 14 chr2 312679 312825 -252943758 - MER21B LTR ERV1 -365 498 329 392 51 0 17 chr2 317545 317604 -252938979 + L1PA6 LINE L1 6097 6154 0 186 289 0 0 chr2 318100 318152 -252938431 + L2 LINE L2 3262 3313 0 26 0 0 0 chr2 319458 319484 -252937099 + AT_rich Low_complexity Low_complexity 1 26 0 3290 145 6 15 chr2 320157 320687 -252935896 - MER1A DNA MER1_type -2 525 1 1670 195 33 0 chr2 322396 322698 -252933885 - AluJo SINE Alu 0 312 1 2489 111 45 0 chr2 324734 325093 -252931490 - THE1C LTR MaLR 0 375 1 321 303 82 65 chr2 326132 326485 -252930098 + HAL1b LINE L1 324 682 -666 402 276 77 7 chr2 326946 327146 -252929437 + L1M4 LINE L1 4061 4274 -1872 2310 185 18 25 chr2 327173 327410 -252929173 - Tigger2 DNA MER2_type 0 2718 2484 2527 60 0 3 chr2 327410 327711 -252928872 + AluY SINE Alu 1 300 -11 2310 185 18 25 chr2 327711 327922 -252928661 - Tigger2 DNA MER2_type -234 2484 2273 450 159 0 0 chr2 327912 327981 -252928602 - Tigger2 DNA MER2_type -2649 69 1 * 425 337 101 45 chr2 328147 328681 -252927902 - L1MEd LINE L1 -5003 1116 553 2090 181 37 16 chr2 329219 329655 -252926928 + MER65A LTR ERV1 1 445 0 2610 64 0 0 chr2 334654 334965 -252921618 - AluY SINE Alu 0 311 1 210 359 41 14 chr2 335260 335405 -252921178 - MIR SINE MIR -27 235 87 27 0 0 0 chr2 337645 337672 -252918911 + AT_rich Low_complexity Low_complexity 1 27 0 339 286 97 10 chr2 339387 339583 -252917000 + L1MDa LINE L1 188 400 -6140 725 219 38 50 chr2 340176 340414 -252916169 + L1MDa LINE L1 1048 1282 -5261 721 241 66 38 chr2 340425 340744 -252915839 - L1MDa LINE L1 -4344 2196 1869 356 69 0 52 chr2 340766 340824 -252915759 + Alu SINE Alu 248 302 0 305 313 91 0 chr2 340869 340968 -252915615 + L1MDa LINE L1 2091 2198 -4342 1044 98 0 0 chr2 341068 341211 -252915372 - L1P4 LINE L1 -449 5719 5577 887 102 0 0 chr2 341214 341352 -252915231 + L1P4 LINE L1 5410 5547 -621 246 277 0 15 chr2 341770 341835 -252914748 + CT-rich Low_complexity Low_complexity 5 68 0 631 288 245 8 chr2 343194 343725 -252912858 + L2 LINE L2 1294 1950 -1364 386 298 0 10 chr2 345791 345895 -252910688 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 351 286 0 0 chr2 345909 346087 -252910496 + (TG)n Simple_repeat Simple_repeat 1 178 0 320 280 126 14 chr2 346448 346591 -252909992 + MIR SINE MIR 104 262 0 2074 116 7 0 chr2 347018 347312 -252909271 + AluSq SINE Alu 4 299 -14 248 305 107 15 chr2 347415 347546 -252909037 - MIR SINE MIR -89 173 31 352 237 13 0 chr2 348968 349120 -252907463 + (TG)n Simple_repeat Simple_repeat 1 154 0 627 188 0 18 chr2 351291 351456 -252905127 + CT-rich Low_complexity Low_complexity 1 162 0 200 300 83 0 chr2 351621 351681 -252904902 - L2 LINE L2 0 3272 3208 356 69 0 52 chr2 352545 352603 -252903980 + Alu SINE Alu 248 302 0 1654 233 43 31 chr2 352648 353435 -252903148 + L1MD1 LINE L1 2091 2890 -3650 836 148 32 0 chr2 353435 353590 -252902993 + L1MB2 LINE L1 6009 6168 -3 1654 233 43 31 chr2 353590 353717 -252902866 + L1MD1 LINE L1 2890 3014 -3526 2828 128 12 16 chr2 353758 353924 -252902659 - MSTA LTR MaLR 0 428 263 2884 107 81 2 chr2 353924 354303 -252902280 + MLT2A2 LTR ERVL 1 418 -35 519 17 0 0 chr2 354303 354363 -252902220 + (TA)n Simple_repeat Simple_repeat 2 61 0 2884 107 81 2 chr2 354363 354403 -252902180 + MLT2A2 LTR ERVL 418 453 0 2828 128 12 16 chr2 354403 354666 -252901917 - MSTA LTR MaLR -165 263 1 1906 293 108 11 chr2 354666 356049 -252900534 + L1MD1 LINE L1 3050 4579 -1961 594 120 40 0 chr2 356049 356149 -252900434 + MLT1B LTR MaLR 1 104 -286 300 295 0 42 chr2 356178 356273 -252900310 - Tigger7 DNA MER2_type -8 2479 2389 * 1210 238 15 8 chr2 356271 356536 -252900047 - Tigger7 DNA MER2_type -466 267 1 * 1302 161 25 84 chr2 356536 356846 -252899737 + MLT1B LTR MaLR 100 390 0 2005 270 36 8 chr2 356846 357568 -252899015 + L1MD1 LINE L1 4575 5316 -1224 2040 237 63 38 chr2 357578 358511 -252898072 + L1MD1 LINE L1 5358 6390 -246 267 103 0 0 chr2 358511 358550 -252898033 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2040 237 63 38 chr2 358550 358804 -252897779 + L1MD1 LINE L1 6390 6636 0 426 368 96 15 chr2 358965 359237 -252897346 + HAL1 LINE L1 32 325 -2182 475 256 144 6 chr2 359298 359458 -252897125 + MER5A DNA MER1_type 8 189 0 247 326 259 0 chr2 359554 359701 -252896882 - MER5A DNA MER1_type -1 188 4 414 286 36 0 chr2 359710 359850 -252896733 - MER5B DNA MER1_type -23 155 11 323 305 55 8 chr2 359851 359979 -252896604 + HAL1 LINE L1 476 609 -1898 228 300 90 0 chr2 361387 361487 -252895096 - LTR33A LTR ERVL -14 509 401 854 275 43 39 chr2 361770 362253 -252894330 - HAL1 LINE L1 -954 1553 1069 750 163 24 36 chr2 362259 362425 -252894158 + MER53 DNA DNA 1 164 -25 720 291 171 71 chr2 362430 363206 -252893377 - HAL1 LINE L1 -1399 1108 255 2232 121 129 5 chr2 363515 363896 -252892687 - MSTA LTR MaLR 0 428 1 2390 190 95 15 chr2 365631 366178 -252890405 + LTR59 LTR ERV1 1 591 -6 370 326 62 31 chr2 366826 367050 -252889533 - L3 LINE CR1 -730 847 617 225 188 42 0 chr2 367598 367646 -252888937 + MLT1I LTR MaLR 320 369 -40 221 321 107 13 chr2 368983 369142 -252887441 + MIR SINE MIR 21 194 -68 390 226 0 0 chr2 369337 369443 -252887140 + (TG)n Simple_repeat Simple_repeat 1 106 0 2650 214 97 6 chr2 369559 370196 -252886387 + MER44D DNA MER2_type 2 696 -9 192 306 0 0 chr2 370399 370448 -252886135 + L2 LINE L2 3261 3309 -4 183 129 0 0 chr2 370805 370836 -252885747 + (TCCA)n Simple_repeat Simple_repeat 3 33 0 530 115 36 24 chr2 370853 371018 -252885565 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 21 0 0 0 chr2 372629 372650 -252883933 + AT_rich Low_complexity Low_complexity 1 21 0 485 121 77 0 chr2 373047 373138 -252883445 - L1PA13 LINE L1 0 6163 6066 195 375 0 0 chr2 373631 373695 -252882888 + L2 LINE L2 3206 3269 -3 282 29 0 0 chr2 373775 373810 -252882773 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 292 319 113 12 chr2 375378 375538 -252881045 + MER5A DNA MER1_type 1 176 -13 296 336 64 0 chr2 375556 375681 -252880902 - L3 LINE CR1 -156 1421 1289 2443 174 54 19 chr2 377179 377645 -252878938 + MER49 LTR ERV1 441 922 -1 1019 285 67 86 chr2 379159 380355 -252876228 + L1MEc LINE L1 1309 2630 -3933 2278 212 19 24 chr2 380361 380542 -252876041 + L1 LINE L1 4695 4875 -1271 3418 82 14 0 chr2 380542 380980 -252875603 + MLT2A1 LTR ERVL 1 444 0 2278 212 19 24 chr2 380980 381373 -252875210 + L1 LINE L1 4875 5266 -880 1621 166 65 9 chr2 381473 381798 -252874785 - MER49 LTR ERV1 -580 343 1 198 103 0 0 chr2 382861 382890 -252873693 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 361 24 0 chr2 384045 384128 -252872455 + MIR SINE MIR 26 110 -152 352 265 66 22 chr2 385857 385993 -252870590 - L1ME4a LINE L1 -5 6116 5975 245 304 173 20 chr2 386162 386520 -252870063 - L1ME4a LINE L1 -382 5739 5327 40 67 0 0 chr2 386520 386595 -252869988 + AT_rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 387236 387267 -252869316 + AT_rich Low_complexity Low_complexity 1 31 0 601 307 116 59 chr2 387366 387937 -252868646 + HAL1b LINE L1 567 902 -944 344 331 180 0 chr2 387938 388110 -252868473 + HAL1b LINE L1 939 1141 -705 702 260 83 56 chr2 388202 388541 -252868042 + L1M4 LINE L1 2932 3279 -2867 398 328 43 14 chr2 388773 389194 -252867389 + L1M4 LINE L1 4724 5156 -990 2962 253 59 30 chr2 389258 390347 -252866236 + L1MB7 LINE L1 382 1501 -5041 1260 216 88 15 chr2 390347 390676 -252865907 - MLT1A1 LTR MaLR -3 362 10 1626 241 50 8 chr2 390694 391076 -252865507 - MLT1A1-int LTR MaLR -8 1727 1330 418 174 0 0 chr2 391244 391313 -252865270 - MLT1A1-int LTR MaLR -988 747 679 2788 206 16 21 chr2 391445 392026 -252864557 - MLT1A1-int LTR MaLR -1078 657 80 621 247 70 0 chr2 392128 392314 -252864269 + L1MB7 LINE L1 5153 5351 -1293 1699 227 118 12 chr2 392328 392830 -252863753 + L1MB7 LINE L1 6055 6609 -73 4926 208 25 6 chr2 392875 393963 -252862620 + L1PA15 LINE L1 1281 2399 -4398 * 5045 164 37 25 chr2 393952 395681 -252860902 + L1PA15 LINE L1 5082 6816 0 276 125 0 54 chr2 395695 395751 -252860832 + L1MB8 LINE L1 6125 6177 -1 2089 108 0 0 chr2 395759 396047 -252860536 + AluSg SINE Alu 1 288 -22 454 197 57 16 chr2 396055 396177 -252860406 + L1MC4a LINE L1 5365 5491 -2317 1039 270 48 64 chr2 396294 396809 -252859774 + L1MC4a LINE L1 5481 5987 -1821 365 278 81 73 chr2 396987 397260 -252859323 + L1MC4a LINE L1 6166 6440 -1368 294 165 18 49 chr2 397876 398040 -252858543 + GA-rich Low_complexity Low_complexity 2 160 0 259 273 112 56 chr2 398892 399053 -252857530 - L2 LINE L2 -18 3295 3126 443 272 180 22 chr2 399163 399663 -252856920 - L2 LINE L2 -338 2976 2398 340 231 204 0 chr2 400035 400143 -252856440 - L2 LINE L2 -908 2406 2277 48 0 0 0 chr2 401303 401351 -252855232 + AT_rich Low_complexity Low_complexity 1 48 0 699 219 44 61 chr2 401916 402144 -252854439 - L1MC1 LINE L1 0 6333 6110 23 33 0 0 chr2 402517 402547 -252854036 + AT_rich Low_complexity Low_complexity 1 30 0 384 121 0 0 chr2 402572 402630 -252853953 - MADE1 DNA Mariner -2 78 21 185 367 52 29 chr2 404700 404910 -252851673 + L2 LINE L2 2107 2321 -993 184 235 62 49 chr2 407269 407350 -252849233 + L3b LINE CR1 1243 1324 -259 1180 203 37 37 chr2 410255 410365 -252846218 - L1MC2 LINE L1 -1 6343 6234 2270 92 0 0 chr2 410365 410668 -252845915 - AluY SINE Alu -8 303 1 1180 203 37 37 chr2 410668 410878 -252845705 - L1MC2 LINE L1 -109 6235 6023 * 3474 218 121 38 chr2 410875 411742 -252844841 - L1MCb LINE L1 -4509 2055 1261 2009 110 0 7 chr2 411742 412024 -252844559 + AluSx SINE Alu 1 280 -32 351 0 0 0 chr2 412026 412065 -252844518 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3474 218 121 38 chr2 412065 412840 -252843743 - L1MCb LINE L1 -5303 1261 216 2579 128 5 3 chr2 412840 413214 -252843369 + THE1C LTR MaLR 1 375 0 3474 218 121 38 chr2 413214 413448 -252843135 - L1MCb LINE L1 -6348 216 3 2056 107 0 0 chr2 415314 415618 -252840965 - AluSg SINE Alu 0 304 1 203 402 20 10 chr2 415630 415732 -252840851 + MIR SINE MIR 18 120 -142 199 261 204 23 chr2 416217 416305 -252840278 + L2 LINE L2 3209 3312 -1 204 280 0 0 chr2 416415 416465 -252840118 + L2 LINE L2 3229 3278 -35 406 266 129 0 chr2 418012 418136 -252838447 - MIR SINE MIR -5 257 118 226 307 118 24 chr2 419404 419531 -252837052 - MIR3 SINE MIR -67 141 3 359 229 72 0 chr2 420424 420507 -252836076 + MER58B DNA MER1_type 237 325 -16 397 55 58 58 chr2 421990 422343 -252834240 + (TG)n Simple_repeat Simple_repeat 1 353 0 483 45 62 57 chr2 422419 422596 -252833987 + (TG)n Simple_repeat Simple_repeat 1 178 0 218 266 112 71 chr2 422981 423150 -252833433 + MIR SINE MIR 8 183 -79 710 307 82 46 chr2 425585 426378 -252830205 - L1MEc LINE L1 -3537 2678 1895 263 344 67 5 chr2 426413 426608 -252829975 - L1MEc LINE L1 -4596 1800 1594 181 43 0 0 chr2 429642 429665 -252826918 - MIR SINE MIR -117 145 123 233 220 20 0 chr2 431715 431765 -252824818 + L3 LINE CR1 1242 1292 -285 201 372 73 3 chr2 433289 433467 -252823116 + MIR SINE MIR 12 203 -59 8355 143 39 6 chr2 434475 434536 -252822047 + L1MA3 LINE L1 3622 3680 -2625 528 59 0 0 chr2 434536 434604 -252821979 + (GAA)n Simple_repeat Simple_repeat 2 69 0 8355 143 39 6 chr2 434604 437136 -252819447 + L1MA3 LINE L1 3680 6305 0 252 379 91 26 chr2 439057 439321 -252817262 - L2 LINE L2 -27 3245 2965 261 325 78 48 chr2 439619 439887 -252816696 - L2 LINE L2 -489 2825 2550 336 290 6 56 chr2 439922 440084 -252816499 - L1ME2 LINE L1 -9 6155 6002 * 621 333 47 15 chr2 440074 440162 -252816421 - L1M4 LINE L1 -2479 3667 3583 1682 184 42 0 chr2 440162 440450 -252816133 - AluJb SINE Alu -12 300 1 621 333 47 15 chr2 440450 440764 -252815819 - L1M4 LINE L1 -2563 3583 3252 * 2217 250 51 22 chr2 440746 441577 -252815006 - L1MC3 LINE L1 -749 5397 5170 699 284 59 6 chr2 441639 441977 -252814606 - L1MC3 LINE L1 -2661 3485 3130 620 144 68 7 chr2 441984 442130 -252814453 + L1MA7 LINE L1 6130 6284 -7 319 319 42 0 chr2 442135 442301 -252814282 + L1ME3A LINE L1 5107 5279 -867 693 302 99 29 chr2 442436 442993 -252813590 + L1ME3A LINE L1 5354 5949 -221 328 203 27 0 chr2 442994 443068 -252813515 + L1MA8 LINE L1 6209 6284 -7 2174 108 0 51 chr2 443109 443425 -252813158 - AluSg SINE Alu -10 300 1 373 303 128 0 chr2 444137 444325 -252812258 + MER58C DNA MER1_type 1 212 -3 379 314 78 31 chr2 444971 445264 -252811319 + L1MC/D LINE L1 5501 5807 -2001 209 233 0 0 chr2 448477 448520 -252808063 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 280 86 0 chr2 449199 449292 -252807291 + MER3 DNA MER1_type 79 179 -30 232 337 53 63 chr2 450223 450413 -252806170 - MIR SINE MIR -50 212 25 184 146 24 49 chr2 450781 450822 -252805761 + MER5B DNA MER1_type 124 163 -15 228 69 92 11 chr2 451573 451660 -252804923 + (TG)n Simple_repeat Simple_repeat 2 95 0 2545 111 14 0 chr2 452537 452896 -252803687 + THE1B LTR MaLR 1 364 0 663 300 55 40 chr2 454626 455026 -252801557 + MLT2D LTR ERVL 9 414 0 1606 201 57 52 chr2 458352 458759 -252797824 + LTR2 LTR ERV1 41 449 0 225 0 0 0 chr2 462723 462748 -252793835 + (T)n Simple_repeat Simple_repeat 1 25 0 371 329 150 31 chr2 462848 463207 -252793376 - L1M4 LINE L1 -1097 5049 4648 684 287 59 53 chr2 463253 463374 -252793209 - L1M4 LINE L1 -1635 4511 4392 6207 58 17 18 chr2 463374 464155 -252792428 - LTR17 LTR ERV1 0 780 1 684 287 59 53 chr2 464155 464709 -252791874 - L1M4 LINE L1 -1754 4392 3832 531 276 104 21 chr2 464705 465089 -252791494 - L1M4 LINE L1 -3529 2617 2202 * 3251 110 69 6 chr2 465767 466248 -252790335 + MER9 LTR ERVK 1 511 0 185 371 0 0 chr2 467320 467382 -252789201 + L2 LINE L2 3005 3066 -206 23 0 0 0 chr2 469252 469275 -252787308 + AT_rich Low_complexity Low_complexity 1 23 0 972 124 0 0 chr2 470235 470364 -252786219 + AluSq/x SINE Alu 1 129 -183 416 296 85 0 chr2 472381 472570 -252784013 - MER92B LTR ERV1 -421 215 11 2773 141 20 50 chr2 472668 473229 -252783354 - Tigger3(Golem) DNA MER2_type -1 3028 2485 261 182 0 0 chr2 473330 473385 -252783198 + GA-rich Low_complexity Low_complexity 4 58 0 704 184 101 10 chr2 473475 473682 -252782901 - MER33 DNA MER1_type -48 276 51 2351 92 0 13 chr2 474192 474496 -252782087 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 475850 475878 -252780705 + GC_rich Low_complexity Low_complexity 1 28 0 195 69 0 0 chr2 475904 475933 -252780650 + (CGGGG)n Simple_repeat Simple_repeat 5 33 0 409 247 54 75 chr2 479866 480052 -252776531 + MER58C DNA MER1_type 28 209 -6 591 129 0 0 chr2 480901 480986 -252775597 + AluSg/x SINE Alu 208 292 -18 303 288 55 43 chr2 481834 481997 -252774586 - L2 LINE L2 -491 2823 2659 288 295 98 16 chr2 482048 482292 -252774291 + L1M4 LINE L1 2994 3257 -2889 24 32 0 0 chr2 482357 482388 -252774195 + AT_rich Low_complexity Low_complexity 1 31 0 426 333 56 59 chr2 482545 482833 -252773750 + L1MEc LINE L1 2099 2385 -4011 439 253 120 71 chr2 483072 483440 -252773143 - L1 LINE L1 -3126 3020 2635 282 260 153 45 chr2 483605 483913 -252772670 + L1M4 LINE L1 3884 4224 -1922 460 346 93 12 chr2 483962 484219 -252772364 + L1M4 LINE L1 4483 4760 -1386 306 129 32 32 chr2 484473 484597 -252771986 + (TTAA)n Simple_repeat Simple_repeat 4 127 0 266 332 45 31 chr2 484751 485040 -252771543 + MER97c DNA MER1_type? 781 1073 -17 246 141 54 11 chr2 485217 485309 -252771274 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 350 137 99 19 chr2 485335 485496 -252771087 + (TAGA)n Simple_repeat Simple_repeat 2 175 0 195 119 34 34 chr2 485569 485628 -252770955 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 2054 156 6 22 chr2 488738 489059 -252767524 - MER1B DNA MER1_type -23 316 1 860 203 183 40 chr2 489059 489308 -252767275 - Tigger3(Golem) DNA MER2_type -2741 288 4 218 306 9 4 chr2 490453 490689 -252765894 + (CA)n Simple_repeat Simple_repeat 1 237 0 269 309 6 0 chr2 490741 490916 -252765667 + (CATA)n Simple_repeat Simple_repeat 2 177 0 434 263 6 0 chr2 490932 491092 -252765491 + (CA)n Simple_repeat Simple_repeat 2 162 0 307 250 14 0 chr2 492699 492771 -252763812 - MER69 DNA AcHobo 0 2526 2454 209 301 88 18 chr2 496509 496622 -252759961 - MIR SINE MIR -60 148 28 1378 139 8 36 chr2 496622 496874 -252759709 + AluJb SINE Alu 58 302 -10 340 270 63 8 chr2 497081 497207 -252759376 + MLT1I LTR MaLR 270 402 -7 864 206 73 5 chr2 501418 501636 -252754947 - L1MA5A LINE L1 -1 6296 6064 253 319 66 58 chr2 502277 502491 -252754092 - L1M4 LINE L1 -1548 4598 4387 2490 48 0 0 chr2 502491 502802 -252753781 + AluYa5 SINE Alu 1 311 0 253 319 66 58 chr2 502802 503039 -252753544 - L1M4 LINE L1 -1759 4387 4143 538 262 117 41 chr2 504425 504917 -252751666 - L1MDa LINE L1 -4511 2029 1543 745 283 125 69 chr2 505150 505758 -252750825 - L1MDa LINE L1 -5426 1104 463 197 305 84 21 chr2 505794 505889 -252750694 - MIR SINE MIR -91 171 71 2695 101 3 3 chr2 506200 506575 -252750008 + THE1C LTR MaLR 1 375 0 1567 234 39 8 chr2 507492 507856 -252748727 - MLT1B LTR MaLR -15 375 1 281 274 89 24 chr2 508033 508157 -252748426 + MIR SINE MIR 117 248 -14 1618 139 204 38 chr2 508355 508722 -252747861 + MSTA LTR MaLR 1 428 0 7593 171 40 67 chr2 508722 510417 -252746166 + THE1B-int LTR MaLR 1 1649 -2 1698 161 75 32 chr2 510425 510772 -252745811 + THE1B LTR MaLR 1 362 -2 198 0 0 0 chr2 511225 511247 -252745336 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 884 222 13 3 chr2 511679 511994 -252744589 - MSTD LTR MaLR 0 396 1 403 233 78 0 chr2 512519 512635 -252743948 + MLT1D LTR MaLR 381 505 0 1927 110 10 52 chr2 512759 513067 -252743516 + AluSg SINE Alu 1 295 -15 188 132 0 26 chr2 516398 516436 -252740147 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 432 285 75 5 chr2 516863 517063 -252739520 + MER20 DNA MER1_type 6 219 0 1832 143 62 20 chr2 517738 518095 -252738488 + THE1C LTR MaLR 1 372 -3 24 32 0 0 chr2 518976 519007 -252737576 + AT_rich Low_complexity Low_complexity 1 31 0 407 307 72 23 chr2 521147 521411 -252735172 - L1ME4a LINE L1 -295 5826 5550 241 272 48 0 chr2 521482 521607 -252734976 - L1ME4a LINE L1 -2350 5458 5328 235 200 36 0 chr2 521769 521824 -252734759 - LTR40b LTR ERVL -2 460 404 281 365 11 11 chr2 523573 523751 -252732832 + (CA)n Simple_repeat Simple_repeat 2 179 0 2206 92 0 7 chr2 523926 524229 -252732354 - AluSx SINE Alu -11 301 1 2718 208 69 60 chr2 525573 526328 -252730255 - L1MC1 LINE L1 -1 6332 5571 828 151 0 0 chr2 526328 526474 -252730109 + CT-rich Low_complexity Low_complexity 3 148 0 506 190 8 0 chr2 526968 527089 -252729494 + GA-rich Low_complexity Low_complexity 3 124 0 222 37 0 0 chr2 527688 527715 -252728868 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 430 301 47 21 chr2 528439 528828 -252727755 + L1MEc LINE L1 1371 1823 -753 737 240 179 28 chr2 529046 529371 -252727212 + MLT1B LTR MaLR 1 374 -16 205 162 0 101 chr2 529475 529574 -252727009 + A-rich Low_complexity Low_complexity 2 90 0 434 281 42 32 chr2 530066 530578 -252726005 - MLT1G1 LTR MaLR -2 593 2 187 246 33 0 chr2 531053 531114 -252725469 + L2 LINE L2 3028 3090 -223 228 193 53 0 chr2 531311 531368 -252725215 - MIR SINE MIR -79 183 124 555 273 88 10 chr2 531723 531917 -252724666 - L1PB4 LINE L1 -6 6150 5942 219 264 31 92 chr2 532446 532609 -252723974 - L2 LINE L2 -52 3261 3109 584 135 19 19 chr2 534355 534459 -252722124 + L1MA4 LINE L1 6197 6300 0 214 294 29 0 chr2 539172 539240 -252717343 + CT-rich Low_complexity Low_complexity 3 72 0 346 264 36 43 chr2 539453 539476 -252717107 - L1M4 LINE L1 -3619 2527 2505 2278 188 43 8 chr2 539476 539945 -252716638 - MER66B LTR ERV1 -1 485 1 346 264 36 43 chr2 539945 540061 -252716522 - L1M4 LINE L1 -3641 2505 2389 258 248 152 41 chr2 540108 540253 -252716330 - L1P LINE L1 -3839 2307 2147 44 20 0 0 chr2 540864 540915 -252715668 + AT_rich Low_complexity Low_complexity 1 51 0 717 224 108 108 chr2 540915 541163 -252715420 - L1MC5 LINE L1 -79 7882 7635 2175 128 0 0 chr2 541163 541459 -252715124 - AluSx SINE Alu -16 296 1 717 224 108 108 chr2 541459 541847 -252714736 - L1MC5 LINE L1 -325 7636 7246 26 50 0 0 chr2 542132 542172 -252714411 + AT_rich Low_complexity Low_complexity 1 40 0 1211 166 67 9 chr2 543025 543248 -252713335 + MER46A DNA MER2_type 1 236 0 1670 221 195 44 chr2 543536 544289 -252712294 - Charlie1a DNA MER1_type -34 1421 555 273 283 146 34 chr2 544385 544618 -252711965 - Charlie1a DNA MER1_type -1054 401 143 657 236 28 34 chr2 544674 544852 -252711731 - Charlie1a DNA MER1_type -1277 178 2 239 212 26 13 chr2 544883 544991 -252711592 - L1P LINE L1 -2364 3782 3672 308 268 132 64 chr2 545615 545880 -252710703 - L1MEc LINE L1 -3188 3376 3094 214 175 35 18 chr2 546469 546526 -252710057 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 361 296 103 57 chr2 546909 547277 -252709306 - L1MEc LINE L1 -4751 1994 1610 22 56 0 0 chr2 552715 552751 -252703832 + AT_rich Low_complexity Low_complexity 1 36 0 772 182 0 0 chr2 553847 553990 -252702593 + MER52A LTR ERV1 1613 1755 0 1818 164 125 3 chr2 554177 554536 -252702047 + MER57A LTR ERV1 1 403 0 3484 233 81 22 chr2 558138 559193 -252697390 - L1MC3 LINE L1 -166 7619 6503 2196 257 44 28 chr2 559181 559982 -252696601 - L1MCb LINE L1 -3034 3530 2717 * 1081 237 59 75 chr2 560008 560701 -252695882 - L1MCb LINE L1 -4849 1196 704 281 342 35 0 chr2 560758 560986 -252695597 + L1ME LINE L1 3340 3575 -2571 1198 94 0 0 chr2 560988 561148 -252695435 - L1PA7 LINE L1 -390 5764 5605 2959 60 5 21 chr2 561148 561546 -252695037 + L1PA7 LINE L1 5763 6158 0 896 282 119 31 chr2 561759 562642 -252693941 + L1ME LINE L1 3847 4807 -1339 589 190 0 0 chr2 562691 562812 -252693771 - L1PB1 LINE L1 -1588 4558 4438 * 5853 147 83 1 chr2 562808 563400 -252693183 + L1PB1 LINE L1 4553 5095 -1056 6075 71 84 14 chr2 563400 563474 -252693109 + L1PA8 LINE L1 5254 5321 -851 2343 92 0 38 chr2 563474 563611 -252692972 + AluSx SINE Alu 1 142 -170 3173 201 23 91 chr2 563611 564651 -252691932 - LTR5 LTR ERVK 0 969 1 2343 92 0 38 chr2 564651 564830 -252691753 + AluSx SINE Alu 142 305 -7 6075 71 84 14 chr2 564830 565610 -252690973 + L1PA8 LINE L1 5321 6168 -4 5853 147 83 1 chr2 565610 566471 -252690112 + L1PB1 LINE L1 5095 6143 -8 589 308 78 30 chr2 566834 567195 -252689388 + L1ME LINE L1 5276 5653 -509 242 285 85 8 chr2 567742 567872 -252688711 + L2 LINE L2 2154 2293 -1021 188 337 79 34 chr2 567985 568163 -252688420 + L2 LINE L2 3128 3313 0 1870 224 55 60 chr2 570247 570886 -252685697 - L1MB3 LINE L1 -14 6169 5534 303 286 7 82 chr2 571341 571488 -252685095 - L1M3 LINE L1 -586 5585 5450 1519 199 36 28 chr2 571593 571955 -252684628 + MLT1A1 LTR MaLR 1 365 0 298 333 27 0 chr2 572154 572265 -252684318 - L1MC5 LINE L1 -50 7911 7798 2264 261 72 42 chr2 572317 573392 -252683191 - L1M3 LINE L1 -2180 3966 2860 296 272 22 43 chr2 774428 774612 -252481971 + (CATA)n Simple_repeat Simple_repeat 1 180 0 257 278 23 40 chr2 774762 774938 -252481645 + (CATA)n Simple_repeat Simple_repeat 1 173 0 286 278 22 39 chr2 775096 775276 -252481307 + (CATA)n Simple_repeat Simple_repeat 1 177 0 1550 251 22 14 chr2 780020 780435 -252476148 - MLT1C LTR MaLR -14 453 36 1001 200 112 59 chr2 782191 782352 -252474231 - L1MA7 LINE L1 0 6291 6140 1611 165 7 4 chr2 782352 782624 -252473959 + AluJo SINE Alu 23 295 -17 1001 200 112 59 chr2 782624 782816 -252473767 - L1MA7 LINE L1 -151 6140 5918 458 191 62 0 chr2 784603 784730 -252471853 + MLT1C LTR MaLR 247 461 -6 228 333 78 16 chr2 784735 784864 -252471719 - MIR SINE MIR -102 160 24 224 232 0 18 chr2 785852 785908 -252470675 + GA-rich Low_complexity Low_complexity 2 56 0 195 171 49 0 chr2 785921 785962 -252470621 + L2 LINE L2 3210 3252 -20 225 368 0 0 chr2 798979 799150 -252457433 + (CAG)n Simple_repeat Simple_repeat 3 173 0 894 229 33 57 chr2 802301 802701 -252453882 + MLT2B1 LTR ERVL 1 479 -41 200 276 20 33 chr2 802723 802875 -252453708 + (TATATG)n Simple_repeat Simple_repeat 5 154 0 * 340 288 17 6 chr2 802827 803004 -252453579 + (TA)n Simple_repeat Simple_repeat 1 179 0 1791 32 0 23 chr2 804452 804669 -252451914 + AluY SINE Alu 84 295 -16 1225 264 35 5 chr2 804839 805206 -252451377 + MLT1B LTR MaLR 1 378 -12 21085 25 2 0 chr2 807416 810203 -252446380 + L1P1 LINE L1 2744 5535 -620 576 303 52 37 chr2 810353 810700 -252445883 - L1ME4a LINE L1 -243 5878 5523 2260 94 0 0 chr2 810764 811062 -252445521 - AluSg SINE Alu -12 298 1 265 286 66 0 chr2 811120 811211 -252445372 - L2 LINE L2 -3 3269 3173 2088 120 27 0 chr2 811548 811848 -252444735 - AluSx SINE Alu -4 308 1 718 256 94 12 chr2 812820 813074 -252443509 + ORSL DNA AcHobo 1 275 0 307 220 8 8 chr2 813287 813405 -252443178 + (CA)n Simple_repeat Simple_repeat 1 118 0 401 339 112 14 chr2 814000 814130 -252442453 + L1MC/D LINE L1 5249 5365 -1175 225 0 0 0 chr2 814130 814155 -252442428 + (CA)n Simple_repeat Simple_repeat 2 26 0 401 339 112 14 chr2 814155 814476 -252442107 + L1MC/D LINE L1 5365 5752 -788 23 68 0 0 chr2 814649 814693 -252441890 + AT_rich Low_complexity Low_complexity 1 44 0 14907 188 22 8 chr2 815514 818720 -252437863 - L1PB1 LINE L1 -1 6866 3553 2230 112 3 3 chr2 818720 819016 -252437567 - AluSq SINE Alu -17 296 1 14907 188 22 8 chr2 819016 821113 -252435470 - L1PB1 LINE L1 -3314 3553 1487 2225 217 39 0 chr2 821110 821604 -252434979 - L1PB1 LINE L1 -6345 518 6 * 290 286 57 26 chr2 821813 821986 -252434597 - LTR56 LTR ERV1 0 445 280 47 33 0 0 chr2 822132 822193 -252434390 + AT_rich Low_complexity Low_complexity 1 61 0 592 385 79 21 chr2 822260 822870 -252433713 - L1M4 LINE L1 -2022 4124 3480 180 0 0 0 chr2 824440 824460 -252432123 + (A)n Simple_repeat Simple_repeat 1 20 0 230 222 42 49 chr2 824460 824604 -252431979 - L1M2 LINE L1 -831 5460 5318 256 333 24 48 chr2 824974 825268 -252431315 - L1M4 LINE L1 -1311 4835 4549 4211 25 5 43 chr2 825414 825973 -252430610 + L1PA4 LINE L1 5615 6152 -3 1111 118 5 27 chr2 826050 826236 -252430347 + L1PA8A LINE L1 5950 6131 0 298 254 105 35 chr2 826734 827006 -252429577 + MER31B LTR ERV1 58 464 -2 325 267 42 48 chr2 827009 827174 -252429409 + MIR SINE MIR 33 196 -66 2284 126 0 0 chr2 829149 829458 -252427125 + AluSx SINE Alu 1 309 -3 829 275 113 24 chr2 829901 830327 -252426256 - MLT1C LTR MaLR -2 465 2 2360 89 0 23 chr2 830850 831154 -252425429 - AluSg SINE Alu -13 297 1 205 322 0 0 chr2 831942 832001 -252424582 - MIR SINE MIR -108 154 96 189 271 71 0 chr2 832163 832233 -252424350 - MER5A DNA MER1_type -83 106 32 459 196 29 22 chr2 833699 833837 -252422746 - L1MB3 LINE L1 -1 6182 6044 492 194 0 10 chr2 833837 833935 -252422648 - FLAM_C SINE Alu -16 127 31 225 0 0 0 chr2 835474 835499 -252421084 + (CCCCG)n Simple_repeat Simple_repeat 5 29 0 191 331 44 59 chr2 837604 837740 -252418843 - MIR SINE MIR -100 162 29 2451 98 0 0 chr2 839385 839691 -252416892 + AluSq SINE Alu 1 306 -7 188 288 0 45 chr2 840179 840245 -252416338 + L2 LINE L2 3207 3269 -3 2226 101 10 3 chr2 840653 840949 -252415634 - AluSg SINE Alu -11 299 2 306 0 0 0 chr2 842216 842250 -252414333 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 244 257 109 20 chr2 842257 842358 -252414225 - L2 LINE L2 -20 3252 3143 365 237 0 57 chr2 842572 842749 -252413834 + (TG)n Simple_repeat Simple_repeat 1 167 0 2395 63 7 23 chr2 844148 844448 -252412135 - AluY SINE Alu -16 295 1 1969 99 10 58 chr2 845334 845658 -252410925 - AluSq SINE Alu 0 313 4 4595 52 7 2 chr2 845818 846704 -252409879 + L1PA6 LINE L1 4972 5862 -292 2081 60 10 20 chr2 846804 847105 -252409478 + L1PA6 LINE L1 5857 6154 0 213 286 95 0 chr2 847749 847812 -252408771 + MIR SINE MIR 121 189 -73 1892 148 13 30 chr2 849027 849332 -252407251 + AluJo SINE Alu 1 300 -12 239 305 38 0 chr2 850161 850266 -252406317 - LTR16A1 LTR ERVL -348 109 1 414 0 0 0 chr2 851402 851448 -252405135 + (TG)n Simple_repeat Simple_repeat 2 47 0 2051 158 7 0 chr2 851926 852236 -252404347 + AluSx SINE Alu 1 312 0 237 83 0 0 chr2 852236 852272 -252404311 + (GGA)n Simple_repeat Simple_repeat 2 37 0 270 197 0 49 chr2 853963 854024 -252402559 + MIR SINE MIR 157 214 -48 193 212 30 106 chr2 855531 855597 -252400986 + MIR SINE MIR 87 147 -115 2470 45 0 86 chr2 856257 856594 -252399989 + AluY SINE Alu 1 308 -3 653 314 105 55 chr2 856794 857774 -252398809 + L1 LINE L1 2803 3896 -2250 715 270 51 70 chr2 857891 858261 -252398322 + MLT1D-int LTR MaLR 1004 1366 -5 1246 211 87 23 chr2 858321 858710 -252397873 + MLT1D LTR MaLR 92 505 0 181 268 89 0 chr2 858864 858920 -252397663 - MIR3 SINE MIR -52 156 96 316 309 114 11 chr2 860152 860327 -252396256 + Charlie2 DNA MER1_type 201 393 -2469 1248 262 112 26 chr2 860448 861074 -252395509 + Charlie2a DNA MER1_type 1495 2174 -688 258 292 31 46 chr2 861084 861214 -252395369 + MER94 DNA DNA 1 128 -6 526 252 47 28 chr2 861223 861477 -252395106 + Charlie2a DNA MER1_type 2182 2440 -422 21 0 0 0 chr2 862158 862179 -252394404 + AT_rich Low_complexity Low_complexity 1 21 0 230 174 130 0 chr2 865070 865116 -252391467 - MIR SINE MIR -86 176 125 404 300 25 0 chr2 865796 865956 -252390627 + (CATATA)n Simple_repeat Simple_repeat 4 167 0 2690 155 43 30 chr2 865964 866554 -252390029 - MER4B LTR ERV1 -10 769 1 231 36 0 0 chr2 866556 866584 -252389999 + (CA)n Simple_repeat Simple_repeat 2 29 0 732 265 87 16 chr2 866627 867182 -252389401 + L1ME2 LINE L1 4993 5578 -592 360 304 52 8 chr2 867272 867449 -252389134 + L1ME2 LINE L1 5881 6068 -102 784 167 0 0 chr2 870483 870615 -252385968 - FLAM_C SINE Alu 0 133 2 291 352 77 22 chr2 870763 870945 -252385638 - MIR SINE MIR -62 200 9 2192 89 101 24 chr2 871350 871688 -252384895 - THE1B LTR MaLR 0 364 1 1524 209 55 55 chr2 873623 874155 -252382428 - LTR55 LTR ERV -16 532 1 696 247 60 26 chr2 874486 874753 -252381830 - MER93b LTR ERV1 0 373 98 238 346 0 13 chr2 875932 876010 -252380573 - MIR SINE MIR -182 80 4 290 288 156 58 chr2 876325 876568 -252380015 + L2 LINE L2 2848 3114 -158 2535 76 0 0 chr2 878338 878642 -252377941 + AluY SINE Alu 1 304 -7 306 260 58 48 chr2 880199 880303 -252376280 - L2 LINE L2 -4 3268 3164 307 66 0 152 chr2 880699 881052 -252375531 + (CACCT)n Simple_repeat Simple_repeat 1 299 0 684 186 49 27 chr2 881878 882061 -252374522 + L1MA9 LINE L1 6088 6274 -38 2214 216 9 2 chr2 882087 882508 -252374075 - MSTB LTR MaLR -2 424 1 8805 198 15 5 chr2 882508 884142 -252372441 - MSTB-int LTR MaLR 0 1651 1 1616 181 13 9 chr2 884142 884457 -252372126 - MSTB LTR MaLR 0 426 111 583 237 30 6 chr2 884568 884737 -252371846 - LTR40b LTR ERVL -1 461 289 274 338 55 5 chr2 886313 886514 -252370069 + LTR40b LTR ERVL 152 362 -100 206 322 115 0 chr2 887912 887999 -252368584 + L2 LINE L2 3152 3248 -24 227 228 70 0 chr2 888409 888466 -252368117 + L2 LINE L2 3188 3248 -24 190 271 114 0 chr2 888805 888875 -252367708 + L2 LINE L2 3235 3312 -1 2902 136 160 9 chr2 889041 889571 -252367012 + MER4B LTR ERV1 1 610 0 710 296 67 63 chr2 893412 893932 -252362651 - MER34B LTR ERV1 0 565 44 1917 133 7 13 chr2 895045 895347 -252361236 - AluSx SINE Alu 0 312 13 699 268 95 13 chr2 901424 901805 -252354778 + MLT1D LTR MaLR 47 505 0 1448 153 71 124 chr2 903079 903530 -252353053 - L1MA9 LINE L1 -5 6307 5881 189 171 0 0 chr2 903530 903565 -252353018 + (TG)n Simple_repeat Simple_repeat 1 35 0 455 302 39 42 chr2 903619 903904 -252352679 + L1MD3 LINE L1 7697 7980 -15 613 216 6 17 chr2 907854 908035 -252348548 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 1983 181 43 5 chr2 908201 908576 -252348007 - MLT1B LTR MaLR -1 389 1 422 283 112 42 chr2 909818 910104 -252346479 + L1MC/D LINE L1 5304 5609 -750 2005 128 41 49 chr2 910116 910483 -252346100 + THE1B LTR MaLR 1 364 0 247 274 152 18 chr2 911239 911403 -252345180 - LTR16A LTR ERVL -17 433 248 432 237 61 23 chr2 911453 911584 -252344999 + MER93b LTR ERV1 17 152 -221 391 214 10 10 chr2 911660 911763 -252344820 + MER57A LTR ERV1 301 403 0 500 150 0 0 chr2 912373 912453 -252344130 - AluS SINE Alu -6 304 225 1051 231 77 19 chr2 912941 913253 -252343330 + MER44D DNA MER2_type 10 609 0 256 239 45 0 chr2 915466 915533 -252341050 - MIR SINE MIR -74 188 119 2460 83 5 117 chr2 916582 916992 -252339591 - THE1B LTR MaLR 0 364 1 24 53 0 0 chr2 917029 917067 -252339516 + AT_rich Low_complexity Low_complexity 1 38 0 523 269 42 0 chr2 917770 917937 -252338646 - MER45A DNA AcHobo -4 174 1 1999 163 77 27 chr2 919171 919575 -252337008 + MSTA LTR MaLR 1 424 -4 16215 61 9 18 chr2 919695 922571 -252334012 + L1PA6 LINE L1 3249 6154 0 359 275 101 20 chr2 922999 923148 -252333435 - MIR SINE MIR -2 260 100 377 155 71 12 chr2 923197 923281 -252333302 + MER110A LTR ERV1 82 170 -298 43408 52 5 1 chr2 923743 929858 -252326725 + L1PA5 LINE L1 11 6147 -7 322 276 26 0 chr2 930660 930736 -252325847 - MIR SINE MIR -68 194 117 1036 160 50 13 chr2 930998 931212 -252325371 + MSTA LTR MaLR 2 214 -141 2222 63 43 0 chr2 931212 931515 -252325068 - L1P LINE L1 -779 5367 5052 653 67 0 2 chr2 931514 931607 -252324976 + L1PA7 LINE L1 6051 6159 -9 * 1358 153 38 13 chr2 931617 931852 -252324731 + MSTA LTR MaLR 188 428 0 2500 50 0 0 chr2 932180 932480 -252324103 - AluY SINE Alu -11 300 1 5311 133 14 5 chr2 1133113 1133971 -252122612 + Tigger1 DNA MER2_type 1553 2418 0 195 237 0 0 chr2 1135924 1135962 -252120621 + L2 LINE L2 3211 3248 -24 272 250 13 26 chr2 1139216 1139292 -252117291 + MLT1J LTR MaLR 423 497 -14 2334 81 20 0 chr2 1144199 1144497 -252112086 - AluSq SINE Alu -9 304 1 207 0 50 50 chr2 1145036 1145076 -252111507 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 254 193 48 0 chr2 1145249 1145332 -252111251 + (CA)n Simple_repeat Simple_repeat 1 87 0 2699 58 0 0 chr2 1146840 1147151 -252109432 + AluY SINE Alu 1 311 0 263 292 23 29 chr2 1148020 1148191 -252108392 - L1ME4a LINE L1 -25 6096 5927 2155 115 16 3 chr2 1149939 1150243 -252106340 - AluSg SINE Alu -2 308 1 278 336 9 0 chr2 1153734 1153850 -252102733 + (CA)n Simple_repeat Simple_repeat 2 118 0 288 309 138 13 chr2 1154419 1154717 -252101866 + L2 LINE L2 2622 2956 -358 210 326 11 11 chr2 1154898 1154990 -252101593 + L2 LINE L2 3187 3278 -35 333 0 0 0 chr2 1155980 1156017 -252100566 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 157 41 41 chr2 1158070 1158242 -252098341 + (CA)n Simple_repeat Simple_repeat 1 172 0 387 131 38 46 chr2 1158343 1158591 -252097992 + (CA)n Simple_repeat Simple_repeat 1 245 0 194 157 22 52 chr2 1158867 1159001 -252097582 + (CA)n Simple_repeat Simple_repeat 2 131 0 308 133 54 24 chr2 1159062 1159228 -252097355 + (CA)n Simple_repeat Simple_repeat 2 172 0 252 351 55 20 chr2 1159337 1159539 -252097044 + L2 LINE L2 1834 2042 -1272 594 0 0 0 chr2 1161077 1161143 -252095440 + (TC)n Simple_repeat Simple_repeat 2 67 0 246 394 42 13 chr2 1169928 1170164 -252086419 + L1MC4a LINE L1 5385 5627 -2181 1573 92 29 103 chr2 1170176 1170525 -252086058 + L1PA8 LINE L1 3104 3426 -2720 8211 93 6 3 chr2 1170525 1172525 -252084058 + L1PA8 LINE L1 4164 6166 -6 2011 123 14 0 chr2 1172608 1172884 -252083699 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 1172884 1172907 -252083676 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 752 273 113 10 chr2 1172942 1173235 -252083348 + MER46C DNA MER2_type 1 323 -15 308 259 6 84 chr2 1173247 1173413 -252083170 + L1MC4a LINE L1 5713 5865 -1943 22 35 0 0 chr2 1173593 1173622 -252082961 + AT_rich Low_complexity Low_complexity 1 29 0 331 289 114 24 chr2 1174391 1174723 -252081860 + L1M4 LINE L1 2120 2481 -3665 1137 272 15 9 chr2 1174808 1175143 -252081440 - MER58B DNA MER1_type 0 341 5 562 304 39 5 chr2 1176178 1176382 -252080201 + Charlie8 DNA MER1_type 27 237 -2180 837 209 0 0 chr2 1177259 1177412 -252079171 - FRAM SINE Alu -12 164 12 229 262 159 37 chr2 1178335 1178442 -252078141 + MIR3 SINE MIR 39 158 -50 412 262 0 0 chr2 1181420 1181523 -252075060 + L1MB8 LINE L1 6076 6178 0 574 154 34 0 chr2 1182123 1182272 -252074311 + (TG)n Simple_repeat Simple_repeat 2 155 0 355 186 40 23 chr2 1182323 1182500 -252074083 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 190 35 12 chr2 1182544 1182834 -252073749 + (TG)n Simple_repeat Simple_repeat 1 296 0 539 172 44 0 chr2 1182857 1183204 -252073379 + (TG)n Simple_repeat Simple_repeat 1 362 0 1992 121 32 24 chr2 1184155 1184495 -252072088 + MER61A LTR ERV1 1 343 0 2251 97 3 0 chr2 1185715 1186005 -252070578 + AluSq SINE Alu 1 291 -22 1508 139 15 120 chr2 1186157 1186481 -252070102 + AluJb SINE Alu 1 290 -12 196 294 134 8 chr2 1188872 1188991 -252067592 - MIR3 SINE MIR -54 154 21 471 317 87 0 chr2 1191299 1191482 -252065101 + MER58B DNA MER1_type 92 290 -51 227 231 192 46 chr2 1192203 1192333 -252064250 + MIR SINE MIR 113 261 -1 2232 124 0 3 chr2 1192558 1192857 -252063726 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 1193706 1193729 -252062854 + (A)n Simple_repeat Simple_repeat 1 23 0 1119 72 0 0 chr2 1194020 1194172 -252062411 + L1PA8 LINE L1 6017 6168 -4 21 0 0 0 chr2 1194233 1194254 -252062329 + AT_rich Low_complexity Low_complexity 1 21 0 364 177 0 0 chr2 1197217 1197279 -252059304 + MLT1A2 LTR MaLR 4 65 -402 619 239 95 23 chr2 1199085 1199348 -252057235 + MER33 DNA MER1_type 43 324 0 527 233 47 31 chr2 1199484 1199677 -252056906 + L1ME LINE L1 815 1010 -5060 700 224 33 0 chr2 1200093 1200245 -252056338 + MER5A DNA MER1_type 33 189 0 234 307 24 87 chr2 1201580 1201707 -252054876 - MIR SINE MIR -57 151 33 240 271 0 57 chr2 1202169 1202239 -252054344 - MIR3 SINE MIR 0 208 143 2290 84 3 3 chr2 1202483 1202767 -252053816 + AluSq SINE Alu 1 284 -29 207 0 0 0 chr2 1202770 1202793 -252053790 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2334 111 0 0 chr2 1203110 1203417 -252053166 - AluSx SINE Alu -5 307 1 2006 106 0 4 chr2 1203680 1203945 -252052638 + AluSx SINE Alu 34 297 -15 1112 234 42 28 chr2 1204751 1205110 -252051473 + MLT1A1 LTR MaLR 2 365 0 1280 171 33 4 chr2 1205535 1205665 -252050918 - MER4A LTR ERV1 0 664 549 1949 91 12 4 chr2 1205665 1205956 -252050627 - AluSx SINE Alu 0 319 27 1280 171 33 4 chr2 1205956 1206073 -252050510 - MER4A LTR ERV1 -115 549 437 431 145 28 45 chr2 1207174 1207319 -252049264 - MER4A LTR ERV1 -203 461 261 601 141 0 10 chr2 1207319 1207418 -252049165 - MER4A LTR ERV1 -566 98 1 953 242 28 32 chr2 1212198 1212483 -252044100 + MLT1A2 LTR MaLR 62 345 -29 365 319 30 15 chr2 1212583 1212718 -252043865 - L1MC/D LINE L1 -2060 5748 5612 222 237 0 54 chr2 1213010 1213196 -252043387 + (CCA)n Simple_repeat Simple_repeat 2 177 0 410 214 0 33 chr2 1213232 1213414 -252043169 + (CCA)n Simple_repeat Simple_repeat 2 177 0 308 102 25 146 chr2 1213457 1213817 -252042766 + (CCCA)n Simple_repeat Simple_repeat 1 316 0 * 351 211 0 49 chr2 1213497 1213873 -252042710 + (CCA)n Simple_repeat Simple_repeat 1 357 0 345 194 0 54 chr2 1213988 1214174 -252042409 + (CCA)n Simple_repeat Simple_repeat 2 177 0 2347 88 3 3 chr2 1215241 1215538 -252041045 - AluSq SINE Alu -16 297 1 696 263 59 4 chr2 1217111 1217347 -252039236 - MER58 DNA MER1_type -2153 267 19 308 299 13 44 chr2 1218542 1218669 -252037914 + MIR SINE MIR 27 138 -124 2421 112 0 0 chr2 1218669 1218981 -252037602 + AluSx SINE Alu 1 312 0 308 299 13 44 chr2 1218981 1219051 -252037532 + MIR SINE MIR 138 209 -53 205 292 56 22 chr2 1219355 1219444 -252037139 - MIR3 SINE MIR -50 158 67 371 263 5 58 chr2 1220267 1220652 -252035931 + (CCAA)n Simple_repeat Simple_repeat 1 364 0 212 223 27 47 chr2 1220674 1220822 -252035761 + (CTACT)n Simple_repeat Simple_repeat 1 145 0 219 217 108 36 chr2 1220924 1221090 -252035493 + (CCCTA)n Simple_repeat Simple_repeat 1 178 0 365 102 17 0 chr2 1222330 1222389 -252034194 + (TG)n Simple_repeat Simple_repeat 1 60 0 715 201 5 9 chr2 1222391 1222947 -252033636 + GA-rich Low_complexity Low_complexity 1 554 0 255 169 46 15 chr2 1222976 1223041 -252033542 - MLT2D LTR ERVL -50 364 298 351 202 0 0 chr2 1223127 1223226 -252033357 + CT-rich Low_complexity Low_complexity 1 99 0 227 208 0 0 chr2 1223226 1223239 -252033344 + MLT2C2 LTR ERVL 408 420 -44 282 56 0 0 chr2 1223239 1223275 -252033308 + (CA)n Simple_repeat Simple_repeat 1 36 0 227 208 0 0 chr2 1223275 1223314 -252033269 + MLT2C2 LTR ERVL 419 460 -4 1216 220 11 11 chr2 1223426 1223712 -252032871 - MLT2D LTR ERVL -128 286 1 2121 46 85 0 chr2 1224069 1224352 -252032231 + AluY SINE Alu 1 305 0 297 295 101 22 chr2 1224925 1225064 -252031519 + MER105 DNA DNA 55 204 0 643 225 6 17 chr2 1225427 1225792 -252030791 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 806 209 3 15 chr2 1225815 1226229 -252030354 + (TGGA)n Simple_repeat Simple_repeat 1 408 0 3041 198 16 7 chr2 1227122 1227798 -252028785 - L1 LINE L1 -1242 4904 4223 7424 23 0 1 chr2 1227823 1229107 -252027476 + L1PA3 LINE L1 4873 6155 0 997 160 21 46 chr2 1229111 1229349 -252027234 - L1 LINE L1 -795 5351 5120 2029 148 3 10 chr2 1230447 1230752 -252025831 - AluJb SINE Alu -9 303 1 1402 275 100 29 chr2 1230935 1231484 -252025099 - MER82 DNA MER2_type -60 593 6 543 304 61 101 chr2 1232045 1232074 -252024509 + L1ME4a LINE L1 5589 5618 -503 1105 72 0 13 chr2 1232074 1232226 -252024357 + L1PB1 LINE L1 5995 6144 -7 543 304 61 101 chr2 1232226 1232739 -252023844 + L1ME4a LINE L1 5618 6109 -12 21 0 0 0 chr2 1232735 1232756 -252023827 + AT_rich Low_complexity Low_complexity 1 21 0 * 252 0 0 0 chr2 1233667 1233695 -252022888 + (CA)n Simple_repeat Simple_repeat 1 28 0 2710 261 124 55 chr2 1234530 1235972 -252020611 + L1MEc LINE L1 35 1628 -4768 2382 97 0 7 chr2 1235972 1236282 -252020301 + AluSx SINE Alu 1 308 -4 2710 261 124 55 chr2 1236282 1236641 -252019942 + L1MEc LINE L1 1628 1961 -4435 12052 136 60 17 chr2 1236641 1237101 -252019482 - Tigger1 DNA MER2_type -5 2413 1974 2283 121 0 0 chr2 1237101 1237406 -252019177 + AluSc SINE Alu 1 305 -4 12052 136 60 17 chr2 1237406 1239058 -252017525 - Tigger1 DNA MER2_type -444 1974 210 898 154 4 150 chr2 1239064 1239298 -252017285 + AluJo SINE Alu 13 212 -100 2335 98 3 0 chr2 1240053 1240349 -252016234 - AluSx SINE Alu -11 301 5 1933 143 10 3 chr2 1241067 1241361 -252015222 - AluSx SINE Alu -16 296 1 229 318 36 55 chr2 1243225 1243335 -252013248 + L2 LINE L2 3145 3252 -20 654 142 0 28 chr2 1246119 1246260 -252010323 + (GGA)n Simple_repeat Simple_repeat 1 137 0 218 382 0 0 chr2 1246281 1246446 -252010137 + G-rich Low_complexity Low_complexity 1 165 0 21 57 0 0 chr2 1246724 1246759 -252009824 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 1247023 1247044 -252009539 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 1247057 1247078 -252009505 + GC_rich Low_complexity Low_complexity 1 21 0 180 261 0 0 chr2 1247369 1247415 -252009168 - MIR SINE MIR -10 252 207 308 267 125 17 chr2 1248188 1248308 -252008275 - MLT1F1 LTR MaLR -264 303 171 607 299 95 79 chr2 1250516 1251201 -252005382 - MER21B LTR ERV1 -147 716 21 225 287 23 11 chr2 1251397 1251484 -252005099 + L2 LINE L2 2271 2358 -956 1005 207 50 1 chr2 1252674 1252916 -252003667 + MLT2C1 LTR ERVL 61 343 -54 195 250 0 0 chr2 1252916 1253000 -252003583 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 226 297 0 0 chr2 1253000 1253064 -252003519 + CT-rich Low_complexity Low_complexity 1 64 0 745 209 0 0 chr2 1254912 1255041 -252001542 + FLAM_C SINE Alu 1 129 -4 1844 179 74 60 chr2 1255288 1255723 -252000860 + MER41B LTR ERV1 105 384 -94 2377 95 3 0 chr2 1255723 1256017 -252000566 - AluSx SINE Alu -17 295 1 1844 179 74 60 chr2 1256017 1256105 -252000478 + MER41B LTR ERV1 384 469 -9 31 0 0 0 chr2 1256198 1256229 -252000354 + AT_rich Low_complexity Low_complexity 1 31 0 219 301 42 49 chr2 1256236 1256379 -252000204 - MIR SINE MIR -75 187 46 252 277 145 0 chr2 1257085 1257168 -251999415 + MIR SINE MIR 52 146 -62 198 282 214 8 chr2 1258809 1258926 -251997657 - MER5A DNA MER1_type -23 166 26 252 205 0 108 chr2 1258933 1259016 -251997567 - MER66A LTR ERV1 -13 465 392 2418 96 0 0 chr2 1259051 1259363 -251997220 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 1259407 1259428 -251997155 + AT_rich Low_complexity Low_complexity 1 21 0 2186 109 7 3 chr2 1259437 1259759 -251996824 + AluSq SINE Alu 1 313 0 322 262 91 9 chr2 1260604 1260718 -251995865 + MIR SINE MIR 30 151 -63 3338 170 25 47 chr2 1261379 1262164 -251994419 - pTR5 LTR ERV1 -730 1708 743 726 82 0 0 chr2 1262164 1262261 -251994322 - MER4B LTR ERV1 -96 514 418 39671 64 9 3 chr2 1262264 1268339 -251988244 + L1PA5 LINE L1 11 6124 -30 653 144 8 44 chr2 1268339 1268540 -251988043 - MER4A LTR ERV1 -173 593 264 521 146 31 10 chr2 1268543 1268639 -251987944 - MER4A LTR ERV1 -566 98 1 337 313 45 8 chr2 1268640 1268774 -251987809 + MLT1C LTR MaLR 43 181 -286 573 211 0 64 chr2 1269752 1269908 -251986675 + MER77 LTR ERV1 62 207 -398 228 261 35 78 chr2 1270128 1270243 -251986340 - MER5A DNA MER1_type 0 189 80 272 303 18 37 chr2 1270615 1270749 -251985834 - MIR SINE MIR -53 155 24 1750 176 0 29 chr2 1270865 1271171 -251985412 + AluJo SINE Alu 1 297 -15 2413 53 3 3 chr2 1271183 1271494 -251985089 + AluY SINE Alu 1 311 0 968 189 6 0 chr2 1271494 1271653 -251984930 + AluJo/FRAM SINE Alu 135 294 -18 721 247 52 51 chr2 1273603 1274005 -251982578 - MER67C LTR ERV1 -1 709 119 1037 134 21 5 chr2 1276175 1276361 -251980222 - MER65A LTR ERV1 -4 441 253 1584 216 71 0 chr2 1276363 1276728 -251979855 + MER57A LTR ERV1 3 393 -10 1254 188 4 16 chr2 1276745 1277001 -251979582 - MER65A LTR ERV1 -189 256 4 3435 131 15 71 chr2 1277280 1277630 -251978953 - MER41B LTR ERV1 0 635 340 756 188 0 0 chr2 1277630 1277763 -251978820 + FLAM_C SINE Alu 1 133 0 3435 131 15 71 chr2 1277763 1278085 -251978498 - MER41B LTR ERV1 -295 340 1 2368 110 0 0 chr2 1278389 1278689 -251977894 - AluSx SINE Alu -12 300 1 2146 117 3 0 chr2 1278913 1279203 -251977380 - AluSg SINE Alu -19 291 1 366 247 99 99 chr2 1279454 1279778 -251976805 - MER34C LTR ERV1 -3 582 259 639 261 0 6 chr2 1279866 1280023 -251976560 - MER34C LTR ERV1 -385 200 45 1480 176 53 7 chr2 1280192 1280476 -251976107 + MER57A LTR ERV1 107 403 0 242 250 33 58 chr2 1280930 1281050 -251975533 - LTR23 LTR ERV1 0 437 321 31 0 0 0 chr2 1281153 1281184 -251975399 + AT_rich Low_complexity Low_complexity 1 31 0 454 33 0 0 chr2 1281184 1281245 -251975338 - L1PA4 LINE L1 -3 6152 6092 403 52 0 0 chr2 1281251 1281309 -251975274 + L1PA2 LINE L1 5989 6046 -109 1204 199 77 3 chr2 1281310 1281622 -251974961 - LTR56 LTR ERV1 -110 335 1 383 206 178 9 chr2 1281622 1281728 -251974855 + MER34C LTR ERV1 115 238 -347 361 183 65 0 chr2 1281818 1281987 -251974596 + (CAG)n Simple_repeat Simple_repeat 1 180 0 311 172 63 29 chr2 1282121 1282295 -251974288 + (CAG)n Simple_repeat Simple_repeat 1 180 0 316 190 58 23 chr2 1282499 1282673 -251973910 + (CAG)n Simple_repeat Simple_repeat 1 180 0 383 254 66 104 chr2 1283180 1283467 -251973116 + MER34C LTR ERV1 310 585 0 186 350 60 0 chr2 1284041 1284141 -251972442 + MIR SINE MIR 59 164 -98 1318 240 122 22 chr2 1284148 1284446 -251972137 + MER39 LTR ERV1 1 268 -439 1565 263 142 12 chr2 1284446 1285016 -251971567 - LTR48B LTR ERV1 0 644 1 1318 240 122 22 chr2 1285016 1285308 -251971275 + MER39 LTR ERV1 268 691 -16 557 254 117 0 chr2 1285312 1285509 -251971074 - MER31A LTR ERV1 -249 236 17 2098 115 3 0 chr2 1285588 1285884 -251970699 - AluSx SINE Alu -13 299 3 1549 266 72 13 chr2 1286360 1286887 -251969696 + MER89 LTR ERV1 1 558 -1 439 83 0 0 chr2 1288611 1288671 -251967912 - MER4C LTR ERV1 0 465 406 5183 114 31 9 chr2 1288672 1289018 -251967565 + MER4E LTR ERV1 1 338 -441 1988 123 10 7 chr2 1289018 1289326 -251967257 + AluSg SINE Alu 1 309 -1 5183 114 31 9 chr2 1289326 1289741 -251966842 + MER4E LTR ERV1 338 779 0 368 306 78 29 chr2 1289760 1290045 -251966538 - L1ME4a LINE L1 -225 5896 5549 183 129 0 0 chr2 1292246 1292277 -251964306 + (TA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 1292504 1292529 -251964054 + AT_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr2 1293754 1293789 -251962794 + (TG)n Simple_repeat Simple_repeat 2 36 0 2316 103 0 0 chr2 1294883 1295195 -251961388 + AluSx SINE Alu 1 312 0 681 266 153 35 chr2 1298254 1298536 -251958047 + MER58B DNA MER1_type 27 341 0 1928 46 13 0 chr2 1299576 1299815 -251956768 - AluY SINE Alu -69 242 1 180 356 82 7 chr2 1301761 1301896 -251954687 + L3b LINE CR1 1291 1435 -148 2221 110 40 35 chr2 1302018 1302390 -251954193 + THE1C LTR MaLR 1 374 -1 242 340 43 0 chr2 1302943 1303037 -251953546 + MIR SINE MIR 86 183 -79 1024 113 69 13 chr2 1355009 1355168 -251901415 - AluSx SINE Alu -16 296 129 421 121 24 12 chr2 1355168 1355251 -251901332 + CT-rich Low_complexity Low_complexity 1 84 0 925 114 15 8 chr2 1355251 1355383 -251901200 - AluSx SINE Alu -180 133 1 1426 164 0 5 chr2 1356904 1357118 -251899465 + AluJb SINE Alu 2 214 -98 234 150 0 0 chr2 1357150 1357190 -251899393 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 725 145 5 43 chr2 1357190 1357376 -251899207 + GA-rich Low_complexity Low_complexity 2 180 0 641 130 0 68 chr2 1357348 1357540 -251899043 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 * 619 175 9 38 chr2 1357502 1357742 -251898841 + GA-rich Low_complexity Low_complexity 1 232 0 * 735 159 6 28 chr2 1358671 1358853 -251897730 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 341 308 67 51 chr2 1358853 1359106 -251897477 - L1MEd LINE L1 -4903 1216 960 1017 43 12 24 chr2 1359129 1359293 -251897290 + (TCTA)n Simple_repeat Simple_repeat 3 164 0 1173 154 13 44 chr2 1359901 1360128 -251896455 - L1PB2 LINE L1 -8 6143 5924 396 92 67 17 chr2 1360185 1360305 -251896278 + (TCTA)n Simple_repeat Simple_repeat 4 129 0 227 342 70 27 chr2 1362121 1362308 -251894275 + L2 LINE L2 2905 3099 -173 323 305 24 54 chr2 1362891 1363058 -251893525 - MIR3 SINE MIR -15 193 32 735 158 38 0 chr2 1363808 1363941 -251892642 + L1PB4 LINE L1 6019 6156 0 405 206 109 0 chr2 1364350 1364442 -251892141 - Tigger1 DNA MER2_type 0 2418 2317 1159 206 25 4 chr2 1364444 1364720 -251891863 + L1MA4 LINE L1 6012 6293 -7 13293 138 42 4 chr2 1364939 1367140 -251889443 - Tigger1 DNA MER2_type -134 2284 1 278 297 71 34 chr2 1369148 1369414 -251887169 + L1ME4a LINE L1 5622 5897 -224 367 73 18 0 chr2 1369637 1369692 -251886891 - L1PB3 LINE L1 -3 6151 6096 361 189 301 35 chr2 1372045 1372188 -251884395 - MER5A DNA MER1_type -4 185 5 234 234 16 0 chr2 1372524 1372588 -251883995 + MLT1L LTR MaLR 550 614 -1 185 259 93 0 chr2 1375446 1375500 -251881083 - MIR SINE MIR -87 175 117 4532 176 26 6 chr2 1375590 1377361 -251879222 + L1PA16 LINE L1 4326 6166 0 22 56 0 0 chr2 1377685 1377721 -251878862 + AT_rich Low_complexity Low_complexity 1 36 0 2333 119 3 0 chr2 1377998 1378309 -251878274 - AluSx SINE Alu 0 312 1 595 351 39 0 chr2 1379694 1379999 -251876584 - MER58B DNA MER1_type 0 341 25 263 183 28 0 chr2 1380365 1380436 -251876147 + (CAGA)n Simple_repeat Simple_repeat 3 75 0 2504 64 0 0 chr2 1380849 1381145 -251875438 - AluY SINE Alu -15 296 1 294 184 105 26 chr2 1381197 1381273 -251875310 + L1PB4 LINE L1 6070 6151 -5 362 191 0 0 chr2 1382266 1382329 -251874254 - AluSx SINE Alu -5 295 233 1239 131 0 0 chr2 1382331 1382506 -251874077 - AluSx SINE Alu -137 175 1 25 0 0 0 chr2 1382689 1382714 -251873869 + AT_rich Low_complexity Low_complexity 1 25 0 419 243 30 65 chr2 1383024 1383193 -251873390 - MER5B DNA MER1_type -10 168 6 291 114 0 0 chr2 1384473 1384517 -251872066 + (TG)n Simple_repeat Simple_repeat 2 45 0 910 238 94 20 chr2 1384554 1384895 -251871688 - L1MD3 LINE L1 -8 7987 7622 1973 127 0 10 chr2 1384909 1385217 -251871366 - AluSx SINE Alu -7 305 1 839 128 6 70 chr2 1385275 1385344 -251871239 - AluSx SINE Alu -109 203 131 1915 68 0 12 chr2 1385344 1385592 -251870991 - AluY SINE Alu -16 295 51 839 128 6 70 chr2 1385592 1385678 -251870905 - AluSx SINE Alu -181 131 58 2098 99 7 0 chr2 1385905 1386198 -251870385 - AluSq SINE Alu -16 297 3 1705 144 0 75 chr2 1387342 1387463 -251869120 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr2 1387463 1387483 -251869100 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1705 144 0 75 chr2 1387483 1387695 -251868888 + AluJo SINE Alu 129 309 -3 22 0 0 0 chr2 1389486 1389508 -251867075 + AT_rich Low_complexity Low_complexity 1 22 0 772 176 0 22 chr2 1389665 1389801 -251866782 - AluJb SINE Alu -11 301 169 329 379 38 17 chr2 1389802 1390037 -251866546 + L1ME4a LINE L1 5653 5892 -229 195 316 63 25 chr2 1390203 1390282 -251866301 + MIR SINE MIR 84 165 -97 22 35 0 0 chr2 1393175 1393204 -251863379 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 7 chr2 1394522 1394832 -251861751 + AluSg SINE Alu 3 310 0 182 333 76 31 chr2 1395082 1395436 -251861147 + L2 LINE L2 2257 2626 -688 297 284 115 34 chr2 1396097 1396246 -251860337 - MIR3 SINE MIR -51 157 44 434 216 128 24 chr2 1397395 1397520 -251859063 - MIR3 SINE MIR -26 182 45 207 226 19 0 chr2 1399880 1399933 -251856650 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 198 91 0 0 chr2 1400257 1400290 -251856293 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1777 45 45 0 chr2 1400290 1400513 -251856070 - AluY SINE Alu -27 284 52 187 70 116 0 chr2 1400841 1400884 -251855699 + A-rich Low_complexity Low_complexity 3 50 0 242 215 13 38 chr2 1401957 1402036 -251854547 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 21 0 0 0 chr2 1402104 1402125 -251854458 + AT_rich Low_complexity Low_complexity 1 21 0 185 128 0 26 chr2 1403814 1403853 -251852730 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1738 139 85 0 chr2 1407104 1407385 -251849198 - AluSx SINE Alu -7 305 1 1670 154 49 0 chr2 1408501 1408786 -251847797 - AluJb SINE Alu -13 299 1 231 311 78 0 chr2 1410280 1410370 -251846213 - MIR3 SINE MIR -16 192 96 643 123 61 0 chr2 1411321 1411435 -251845148 - L1PA15 LINE L1 -7 6158 6038 625 281 144 22 chr2 1413033 1413393 -251843190 - L2 LINE L2 -62 3251 2848 398 249 67 61 chr2 1414303 1414468 -251842115 + MER3 DNA MER1_type 40 205 -4 2414 53 3 0 chr2 1414515 1414818 -251841765 - AluY SINE Alu -7 304 1 222 214 29 14 chr2 1414831 1414901 -251841682 + (TA)n Simple_repeat Simple_repeat 1 71 0 213 139 0 0 chr2 1415203 1415246 -251841337 + (TC)n Simple_repeat Simple_repeat 2 44 0 387 0 0 0 chr2 1415273 1415316 -251841267 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 230 107 89 chr2 1416097 1416271 -251840312 - MIR SINE MIR -50 212 36 1996 126 0 13 chr2 1416466 1416768 -251839815 - AluSp SINE Alu -15 298 1 197 239 65 98 chr2 1419228 1419320 -251837263 + MIR SINE MIR 117 205 -57 311 326 61 15 chr2 1422181 1422313 -251834270 + L1MC4 LINE L1 6582 6719 -1323 * 326 300 0 55 chr2 1422250 1422360 -251834223 - L1MC4 LINE L1 -1340 6702 6599 234 62 0 0 chr2 1422705 1422737 -251833846 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 576 184 0 0 chr2 1423531 1423678 -251832905 + CT-rich Low_complexity Low_complexity 1 147 0 207 179 0 0 chr2 1423704 1423743 -251832840 + CT-rich Low_complexity Low_complexity 2 40 0 25 75 0 0 chr2 1424275 1424328 -251832255 + AT_rich Low_complexity Low_complexity 1 53 0 1333 87 108 0 chr2 1424647 1424842 -251831741 - L1PA5 LINE L1 0 6154 5939 243 250 66 26 chr2 1425319 1425395 -251831188 + L2 LINE L2 3235 3313 0 352 303 61 36 chr2 1426110 1426275 -251830308 + MIR SINE MIR 86 254 -8 3334 106 42 15 chr2 1426506 1426986 -251829597 + MER1A DNA MER1_type 37 529 0 353 267 95 9 chr2 1427035 1427151 -251829432 + MIR3 SINE MIR 69 194 -14 464 277 85 43 chr2 1430545 1430733 -251825850 - MIR SINE MIR -2 260 65 254 294 50 89 chr2 1430712 1430892 -251825691 + MIR SINE MIR 79 251 -11 * 182 122 0 41 chr2 1431050 1431099 -251825484 + (CAGAGA)n Simple_repeat Simple_repeat 5 51 0 218 226 16 0 chr2 1431151 1431213 -251825370 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 191 360 10 10 chr2 1431360 1431460 -251825123 - L2 LINE L2 -600 2714 2615 200 290 81 0 chr2 1432172 1432234 -251824349 + MIR SINE MIR 82 148 -60 30 59 0 0 chr2 1432555 1432606 -251823977 + AT_rich Low_complexity Low_complexity 1 51 0 186 43 0 0 chr2 1433232 1433255 -251823328 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 813 133 7 46 chr2 1434526 1434677 -251821906 + FRAM SINE Alu 22 166 -10 2394 83 0 6 chr2 1434920 1435234 -251821349 + AluSx SINE Alu 1 312 0 1004 112 0 0 chr2 1438918 1439052 -251817531 + AluSq/x SINE Alu 1 134 -178 2014 128 0 0 chr2 1439055 1439344 -251817239 + AluSx SINE Alu 3 291 -21 2186 98 0 0 chr2 1439831 1440127 -251816456 + AluSx SINE Alu 1 296 -16 295 366 9 18 chr2 1440357 1440469 -251816114 - MIR3 SINE MIR -52 156 46 1203 124 0 0 chr2 1440971 1441156 -251815427 + L1MA2 LINE L1 6120 6304 0 290 143 44 0 chr2 1443627 1443718 -251812865 + (TA)n Simple_repeat Simple_repeat 2 96 0 267 130 29 14 chr2 1443747 1443816 -251812767 + (TA)n Simple_repeat Simple_repeat 1 70 0 349 333 42 0 chr2 1444045 1444165 -251812418 - MIR SINE MIR -50 212 88 186 43 0 0 chr2 1444960 1444983 -251811600 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 358 306 20 61 chr2 1445967 1446163 -251810420 - L2 LINE L2 -208 3064 2877 195 380 0 0 chr2 1446726 1446805 -251809778 + MIR SINE MIR 172 250 -12 21 0 0 0 chr2 1447420 1447441 -251809142 + AT_rich Low_complexity Low_complexity 1 21 0 1252 181 104 4 chr2 1447708 1447968 -251808615 - AluJo SINE Alu -26 286 1 2397 73 0 0 chr2 1447977 1448280 -251808303 - AluY SINE Alu -8 303 1 221 240 20 0 chr2 1449554 1449604 -251806979 + L2 LINE L2 3222 3272 0 228 122 0 0 chr2 1450782 1450823 -251805760 + (T)n Simple_repeat Simple_repeat 1 41 0 232 316 124 28 chr2 1452034 1452211 -251804372 + MIR SINE MIR 42 235 -27 581 126 0 0 chr2 1452213 1452300 -251804283 - AluJ/FLAM SINE Alu -225 87 1 218 333 0 0 chr2 1452917 1452977 -251803606 + L2 LINE L2 3205 3264 -8 2219 101 3 3 chr2 1453186 1453494 -251803089 + AluSq SINE Alu 1 308 -5 183 375 0 39 chr2 1453789 1453893 -251802690 + L2 LINE L2 3195 3294 -19 276 350 21 0 chr2 1453989 1454086 -251802497 + MIR SINE MIR 13 111 -151 1080 195 107 7 chr2 1454778 1455050 -251801533 - AluJb SINE Alu -13 299 1 5128 87 13 1 chr2 1456052 1456728 -251799855 + LTR8 LTR ERV1 8 691 0 310 317 7 7 chr2 1456925 1457067 -251799516 - L1ME4a LINE L1 -224 5897 5756 25 0 0 0 chr2 1458225 1458250 -251798333 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 1458343 1458365 -251798218 + AT_rich Low_complexity Low_complexity 1 22 0 385 283 76 7 chr2 1460693 1460854 -251795729 + MIR SINE MIR 3 167 -66 212 83 0 28 chr2 1462359 1462395 -251794188 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 180 307 120 0 chr2 1462787 1462862 -251793721 - L2 LINE L2 -5 3267 3184 22 35 0 0 chr2 1463006 1463035 -251793548 + AT_rich Low_complexity Low_complexity 1 29 0 354 305 48 45 chr2 1464440 1464837 -251791746 - HAL1 LINE L1 -1047 1460 1063 261 327 106 0 chr2 1465049 1465162 -251791421 - MIR SINE MIR -79 183 59 273 323 62 73 chr2 1465415 1465675 -251790908 + MER112 DNA MER1_type 3 259 -1 1874 130 29 69 chr2 1466148 1466524 -251790059 + THE1C LTR MaLR 15 375 0 474 294 0 0 chr2 1467397 1467643 -251788940 + CT-rich Low_complexity Low_complexity 1 246 0 269 331 0 0 chr2 1467794 1467963 -251788620 + CT-rich Low_complexity Low_complexity 3 171 0 290 322 0 6 chr2 1468050 1468230 -251788353 + CT-rich Low_complexity Low_complexity 1 179 0 283 325 0 0 chr2 1468351 1468520 -251788063 + CT-rich Low_complexity Low_complexity 3 171 0 229 346 0 0 chr2 1468433 1468612 -251787971 + (CTTG)n Simple_repeat Simple_repeat 2 180 0 * 445 278 6 6 chr2 1468901 1469081 -251787502 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 244 329 0 0 chr2 1469059 1469301 -251787282 + (CATG)n Simple_repeat Simple_repeat 1 242 0 * 2794 209 86 38 chr2 1469397 1469707 -251786876 - L1MA9 LINE L1 -38 6274 5980 2032 138 0 0 chr2 1469707 1470012 -251786571 - AluSx SINE Alu -5 307 3 2794 209 86 38 chr2 1470012 1470183 -251786400 - L1MA9 LINE L1 -332 5980 5819 180 0 0 0 chr2 1470183 1470203 -251786380 + (TA)n Simple_repeat Simple_repeat 2 21 0 2794 209 86 38 chr2 1470203 1470491 -251786092 - L1MA9 LINE L1 -493 5819 5467 906 118 105 0 chr2 1470491 1470644 -251785939 - MER4C LTR ERV1 0 465 297 * 1246 116 0 5 chr2 1470637 1470826 -251785757 - MER4C LTR ERV1 -277 188 1 6334 201 19 39 chr2 1470827 1470862 -251785721 - L1MA9 LINE L1 -714 5469 5435 3109 165 100 27 chr2 1470862 1471539 -251785044 + LTR8A LTR ERV1 1 727 0 6334 201 19 39 chr2 1471539 1473205 -251783378 - L1MA9 LINE L1 -748 5435 3808 2238 207 57 117 chr2 1473865 1474245 -251782338 + L1MB8 LINE L1 4700 5101 -1077 2031 110 0 43 chr2 1474245 1474571 -251782012 + AluSx SINE Alu 1 312 0 2238 207 57 117 chr2 1474571 1475690 -251780893 + L1MB8 LINE L1 5101 6097 -81 2138 232 44 13 chr2 1475696 1476217 -251780366 + MER44D DNA MER2_type 9 600 -5 424 127 42 0 chr2 1476225 1476296 -251780287 + L1MB7 LINE L1 6101 6174 -10 353 329 91 11 chr2 1479175 1479449 -251777134 - L2 LINE L2 -4 3309 3014 381 102 0 0 chr2 1480771 1480830 -251775753 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 2613 105 8 3 chr2 1482176 1482537 -251774046 + THE1B LTR MaLR 2 364 0 1869 154 14 0 chr2 1482925 1483218 -251773365 - AluJb SINE Alu -15 297 1 2415 74 0 0 chr2 1484689 1484987 -251771596 + AluY SINE Alu 1 298 -13 939 158 7 0 chr2 1485628 1485780 -251770803 + MER50 LTR ERV1 452 604 -130 446 213 11 20 chr2 1487253 1487368 -251769215 - L1MA6 LINE L1 -147 6154 6042 235 298 193 9 chr2 1491791 1491905 -251764678 - L2 LINE L2 -1 3271 3137 2440 119 25 0 chr2 1492325 1492679 -251763904 - THE1B LTR MaLR 0 364 2 2109 104 0 0 chr2 1493156 1493453 -251763130 - AluY SINE Alu 0 312 16 246 291 39 39 chr2 1497068 1497171 -251759412 + MIR3 SINE MIR 13 115 -93 538 360 93 15 chr2 1499438 1500298 -251756285 + L2 LINE L2 2345 3272 -41 1979 140 10 0 chr2 1500439 1500739 -251755844 + AluSx SINE Alu 1 303 -9 227 350 26 43 chr2 1500872 1500989 -251755594 + L2 LINE L2 3072 3186 -86 960 174 0 0 chr2 1502212 1502367 -251754216 + FRAM SINE Alu 5 159 -7 23 33 0 0 chr2 1503751 1503781 -251752802 + AT_rich Low_complexity Low_complexity 1 30 0 1060 259 4 0 chr2 1505064 1505307 -251751276 + MER47B DNA MER2_type 175 418 0 389 335 71 8 chr2 1505944 1506183 -251750400 + L2 LINE L2 490 743 -2571 352 235 147 59 chr2 1509182 1509421 -251747162 - L1MC4a LINE L1 -165 5956 5695 249 316 89 48 chr2 1509426 1509594 -251746989 - MIR SINE MIR 0 262 88 229 217 142 9 chr2 1509889 1509995 -251746588 - L1MC4a LINE L1 -2408 5400 5281 422 312 0 32 chr2 1512364 1512489 -251744094 + MIR SINE MIR 10 130 -132 219 69 0 0 chr2 1512507 1512536 -251744047 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 2126 134 36 36 chr2 1512539 1512897 -251743686 + THE1B LTR MaLR 7 364 0 202 216 0 0 chr2 1512899 1512936 -251743647 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 247 220 60 70 chr2 1512936 1513036 -251743547 + MIR SINE MIR 152 250 -12 4028 195 69 24 chr2 1514834 1516385 -251740198 + L1MB3 LINE L1 4571 6177 -6 249 291 34 11 chr2 1517784 1517959 -251738624 + (AGATG)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr2 1518348 1518371 -251738212 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr2 1519442 1519472 -251737111 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1037 205 122 42 chr2 1519893 1520229 -251736354 - L1MD2 LINE L1 -10 6349 5987 3183 226 51 10 chr2 1520521 1521405 -251735178 - L1MD2 LINE L1 -324 6035 5120 311 313 12 38 chr2 1521419 1521579 -251735004 + L2 LINE L2 3158 3313 0 352 118 40 26 chr2 1523615 1523691 -251732892 + C-rich Low_complexity Low_complexity 2 78 0 403 192 10 10 chr2 1523710 1523809 -251732774 + CT-rich Low_complexity Low_complexity 1 99 0 24 67 0 0 chr2 1523898 1523943 -251732640 + AT_rich Low_complexity Low_complexity 1 45 0 879 292 134 60 chr2 1524771 1526421 -251730162 - HAL1 LINE L1 -3 2504 732 2230 132 0 0 chr2 1526512 1526823 -251729760 + AluSq SINE Alu 1 311 -2 1592 179 11 7 chr2 1527887 1528172 -251728411 + AluJb SINE Alu 21 306 -6 29 0 0 0 chr2 1528240 1528269 -251728314 + AT_rich Low_complexity Low_complexity 1 29 0 420 20 0 0 chr2 1528774 1528823 -251727760 + (CA)n Simple_repeat Simple_repeat 2 50 0 238 274 12 24 chr2 1529218 1529302 -251727281 - MIR SINE MIR -25 237 155 233 315 47 24 chr2 1529342 1529469 -251727114 + MIR SINE MIR 62 191 -71 437 303 106 31 chr2 1529792 1530405 -251726178 + L1ME LINE L1 4366 5024 -1122 562 205 131 0 chr2 1530417 1530539 -251726044 + FLAM_C SINE Alu 6 143 0 343 275 118 26 chr2 1530545 1530981 -251725602 + L1ME LINE L1 5030 5506 -656 2583 191 19 56 chr2 1532434 1532636 -251723947 - MER44D DNA MER2_type -1882 605 397 2187 102 3 3 chr2 1532636 1532916 -251723667 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr2 1532916 1532937 -251723646 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2187 102 3 3 chr2 1532937 1532951 -251723632 + AluSx SINE Alu 282 295 -17 2583 191 19 56 chr2 1532951 1533319 -251723264 - MER44D DNA MER2_type -2090 397 1 1201 200 136 4 chr2 1533880 1534145 -251722438 + AluJo SINE Alu 3 302 0 3319 87 20 0 chr2 1535245 1535704 -251720879 + L1PA13 LINE L1 5696 6163 0 2269 103 0 0 chr2 1535707 1535988 -251720595 + AluSp SINE Alu 1 281 -32 261 0 0 0 chr2 1535988 1536017 -251720566 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 362 216 0 9 chr2 1539481 1539592 -251716991 + (CA)n Simple_repeat Simple_repeat 2 111 0 508 238 39 33 chr2 1540797 1540978 -251715605 + MIR SINE MIR 22 203 -59 514 219 182 0 chr2 1541182 1541369 -251715214 + L1MC5 LINE L1 7008 7228 -733 938 246 56 58 chr2 1541519 1541797 -251714786 + L1MC5 LINE L1 7304 7583 -378 2046 97 29 14 chr2 1541797 1542098 -251714485 + AluSx SINE Alu 1 305 0 938 246 56 58 chr2 1542098 1542334 -251714249 + L1MC5 LINE L1 7583 7818 -143 2400 65 0 40 chr2 1544306 1544629 -251711954 + AluY SINE Alu 1 310 -1 30 45 0 0 chr2 1544884 1544928 -251711655 + AT_rich Low_complexity Low_complexity 1 44 0 435 149 0 0 chr2 1546151 1546225 -251710358 + (CA)n Simple_repeat Simple_repeat 1 74 0 311 204 66 72 chr2 1546288 1546455 -251710128 - L1MC4 LINE L1 -188 7854 7689 27 100 0 0 chr2 1546732 1546822 -251709761 + AT_rich Low_complexity Low_complexity 1 90 0 212 297 0 14 chr2 1546990 1547064 -251709519 + CT-rich Low_complexity Low_complexity 4 76 0 280 295 114 0 chr2 1547333 1547438 -251709145 + MIR SINE MIR 24 140 -122 269 266 75 0 chr2 1547745 1547839 -251708744 - L1MC4a LINE L1 -1910 5898 5798 190 328 74 16 chr2 1547960 1548082 -251708501 - MIR SINE MIR -5 257 129 21 0 0 0 chr2 1548853 1548874 -251707709 + AT_rich Low_complexity Low_complexity 1 21 0 307 294 103 38 chr2 1549856 1550040 -251706543 - MIR SINE MIR -29 233 38 555 278 57 10 chr2 1551186 1551395 -251705188 + MER58A DNA MER1_type 2 220 -4 198 103 0 0 chr2 1552478 1552507 -251704076 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2312 109 43 3 chr2 1554079 1554429 -251702154 + L1PA16 LINE L1 5793 6156 -10 368 82 16 0 chr2 1555946 1556007 -251700576 + (CA)n Simple_repeat Simple_repeat 2 63 0 24 103 0 0 chr2 1556047 1556134 -251700449 + AT_rich Low_complexity Low_complexity 1 87 0 22 70 0 0 chr2 1556470 1556513 -251700070 + AT_rich Low_complexity Low_complexity 1 43 0 1848 153 33 24 chr2 1558512 1558846 -251697737 - MER1B DNA MER1_type 0 337 1 340 273 80 33 chr2 1559026 1559176 -251697407 + MER103 DNA DNA 10 166 0 225 178 0 0 chr2 1559406 1559451 -251697132 + CT-rich Low_complexity Low_complexity 3 47 0 297 320 0 0 chr2 1561090 1561165 -251695418 + polypurine Low_complexity Low_complexity 3 77 0 497 99 0 0 chr2 1561265 1561336 -251695247 + L1P3 LINE L1 5384 5454 -700 265 127 0 111 chr2 1561327 1561390 -251695193 + L1MA8 LINE L1 6236 6291 0 * 366 290 55 45 chr2 1562938 1563138 -251693445 - L2 LINE L2 -534 2780 2579 205 316 11 0 chr2 1563193 1563288 -251693295 - L2 LINE L2 -939 2375 2280 223 353 88 0 chr2 1563567 1563703 -251692880 + L2 LINE L2 2211 2358 -956 1777 189 54 23 chr2 1563780 1563877 -251692706 - MLT1A1 LTR MaLR 0 365 272 1675 137 103 37 chr2 1563877 1564227 -251692356 + THE1C LTR MaLR 3 375 0 1777 189 54 23 chr2 1564227 1564483 -251692100 - MLT1A1 LTR MaLR -93 272 1 423 247 147 65 chr2 1566148 1566379 -251690204 - MIR SINE MIR 0 262 13 261 234 68 104 chr2 1567018 1567210 -251689373 + L1MB7 LINE L1 72 256 -6286 778 299 74 11 chr2 1567374 1567738 -251688845 + L1MB7 LINE L1 485 871 -5671 2433 267 49 39 chr2 1567925 1570056 -251686527 + L1MB7 LINE L1 946 3081 -3563 * 3218 219 29 54 chr2 1570044 1570132 -251686451 + L1MB7 LINE L1 4755 4844 -1838 1717 181 79 18 chr2 1570132 1570474 -251686109 + MLT1A1 LTR MaLR 3 365 0 3218 219 29 54 chr2 1570474 1570802 -251685781 + L1MB7 LINE L1 4844 5179 -1503 2421 76 0 22 chr2 1570802 1571119 -251685464 + AluY SINE Alu 1 310 -1 3218 219 29 54 chr2 1571119 1572129 -251684454 + L1MB7 LINE L1 5179 6140 -542 1417 208 7 13 chr2 1572152 1572460 -251684123 + L1MB7 LINE L1 6362 6667 -15 2241 89 0 11 chr2 1572998 1573318 -251683265 - AluSg SINE Alu 0 318 2 234 204 0 20 chr2 1575662 1575711 -251680872 + MLT1E LTR MaLR 113 160 -433 666 287 46 26 chr2 1575781 1576088 -251680495 + MLT1E LTR MaLR 281 593 0 280 281 12 12 chr2 1576908 1576990 -251679593 + L2 LINE L2 3187 3268 -4 240 357 25 25 chr2 1579182 1579378 -251677205 + MIR SINE MIR 44 239 -23 242 261 18 45 chr2 1580847 1580958 -251675625 - MIR3 SINE MIR -4 204 97 303 49 0 0 chr2 1580998 1581039 -251675544 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 194 278 0 37 chr2 1581086 1581140 -251675443 + MIR SINE MIR 66 117 -91 2152 252 63 18 chr2 1581339 1581524 -251675059 + MER82 DNA MER2_type 12 187 -466 14525 135 26 18 chr2 1581524 1583917 -251672666 - Tigger1 DNA MER2_type 0 2418 5 2152 252 63 18 chr2 1583917 1584345 -251672238 + MER82 DNA MER2_type 187 653 0 22 0 0 0 chr2 1584359 1584381 -251672202 + AT_rich Low_complexity Low_complexity 1 22 0 6003 42 0 0 chr2 1584708 1585438 -251671145 - L1PA5 LINE L1 -743 5403 4674 6452 41 1 4 chr2 1585438 1586198 -251670385 + L1PA5 LINE L1 5390 6151 -3 21 0 0 0 chr2 1587320 1587341 -251669242 + AT_rich Low_complexity Low_complexity 1 21 0 1825 176 58 6 chr2 1589048 1589395 -251667188 + MSTB LTR MaLR 2 366 -60 716 199 28 33 chr2 1589780 1589961 -251666622 + MER20 DNA MER1_type 7 186 -33 206 245 20 0 chr2 1592728 1592777 -251663806 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 791 183 4 0 chr2 1592798 1593068 -251663515 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 351 0 0 0 chr2 1593897 1593936 -251662647 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 1594193 1594221 -251662362 + AT_rich Low_complexity Low_complexity 1 28 0 1928 141 0 21 chr2 1597622 1597947 -251658636 + AluSx SINE Alu 1 319 0 226 292 60 77 chr2 1598264 1598432 -251658151 + MIR SINE MIR 81 245 -17 770 282 18 0 chr2 1598565 1598785 -251657798 + MER58A DNA MER1_type 1 224 0 441 0 0 0 chr2 1601168 1601217 -251655366 + (TA)n Simple_repeat Simple_repeat 1 49 0 306 287 39 39 chr2 1601614 1601743 -251654840 + L2 LINE L2 1744 1872 -1442 433 188 0 26 chr2 1601823 1601940 -251654643 + CT-rich Low_complexity Low_complexity 3 116 0 389 299 81 11 chr2 1602052 1602323 -251654260 - LTR16A LTR ERVL -16 434 145 221 311 19 9 chr2 1602498 1602604 -251653979 + L2 LINE L2 2229 2335 -979 223 277 40 30 chr2 1603879 1603980 -251652603 - MER5A DNA MER1_type -74 115 14 214 373 77 21 chr2 1605708 1605941 -251650642 + L2 LINE L2 3006 3251 -62 180 111 0 0 chr2 1605981 1606008 -251650575 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 452 232 48 16 chr2 1606543 1606668 -251649915 + L2 LINE L2 3185 3313 0 496 305 30 39 chr2 1607810 1608098 -251648485 + MLT1H1 LTR MaLR 12 297 -288 61 58 0 0 chr2 1609342 1609445 -251647138 + AT_rich Low_complexity Low_complexity 1 103 0 28 0 0 0 chr2 1611759 1611787 -251644796 + AT_rich Low_complexity Low_complexity 1 28 0 1898 98 4 23 chr2 1612501 1612765 -251643818 - AluSg SINE Alu -51 259 1 2312 90 0 13 chr2 1612767 1613068 -251643515 - AluSg SINE Alu -6 304 8 459 323 17 43 chr2 1613463 1613695 -251642888 + MIR SINE MIR 18 243 -19 360 0 0 0 chr2 1614128 1614168 -251642415 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr2 1614167 1614187 -251642396 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1029 213 153 67 chr2 1614538 1614682 -251641901 + MLT1D LTR MaLR 1 131 -374 2065 130 138 5 chr2 1614682 1615060 -251641523 + MSTA LTR MaLR 1 428 0 1029 213 153 67 chr2 1615060 1615380 -251641203 + MLT1D LTR MaLR 131 505 0 2266 113 0 0 chr2 1615590 1615890 -251640693 - AluSx SINE Alu -12 300 1 321 315 87 8 chr2 1616727 1616854 -251639729 + L2 LINE L2 3136 3272 0 1177 73 12 6 chr2 1618380 1618545 -251638038 - L1PA13 LINE L1 -4 6159 5994 318 281 132 12 chr2 1619143 1619310 -251637273 + MIR SINE MIR 20 206 -56 1821 139 10 23 chr2 1619443 1619746 -251636837 - AluSq SINE Alu -14 299 1 21 0 0 0 chr2 1619927 1619948 -251636635 + AT_rich Low_complexity Low_complexity 1 21 0 355 340 69 14 chr2 1620061 1620349 -251636234 + L1 LINE L1 4031 4334 -1812 239 296 0 20 chr2 1620652 1620750 -251635833 + L1 LINE L1 4741 4836 -1310 2659 40 0 0 chr2 1620919 1621216 -251635367 + AluY SINE Alu 1 297 -14 2254 110 3 3 chr2 1623199 1623500 -251633083 - AluSc SINE Alu -8 301 1 3941 60 12 6 chr2 1623541 1624044 -251632539 + L1PA8 LINE L1 5662 6167 -5 1271 182 121 49 chr2 1625742 1626089 -251630494 + MLT1A2 LTR MaLR 1 372 -2 2823 85 3 6 chr2 1626415 1626780 -251629803 + THE1B LTR MaLR 1 364 0 2057 62 4 0 chr2 1627186 1627445 -251629138 + L1PA8 LINE L1 5662 5921 -251 11631 23 0 2 chr2 1628022 1630150 -251626433 + L1PA3 LINE L1 4031 6155 0 2225 85 0 72 chr2 1630630 1630968 -251625615 + AluSx SINE Alu 1 312 0 2393 90 3 0 chr2 1631715 1632025 -251624558 - AluY SINE Alu 0 311 1 1047 125 0 0 chr2 1632025 1632161 -251624422 - AluSq/x SINE Alu -177 136 1 21 0 0 0 chr2 1632605 1632626 -251623957 + AT_rich Low_complexity Low_complexity 1 21 0 2234 112 0 0 chr2 1633983 1634278 -251622305 - AluSx SINE Alu -16 296 2 421 97 0 0 chr2 1734278 1734340 -251522243 - Alu SINE Alu -256 62 1 337 221 11 11 chr2 1734369 1734464 -251522119 - L1PA16 LINE L1 -15 6151 6057 1306 200 69 145 chr2 1734468 1735034 -251521549 - MER66B-int LTR ERV1 -6153 523 1 2250 190 14 53 chr2 1735034 1735109 -251521474 - MER66B LTR ERV1 0 486 410 2060 141 3 3 chr2 1735109 1735407 -251521176 + AluSx SINE Alu 1 298 -14 2250 190 14 53 chr2 1735407 1735837 -251520746 - MER66B LTR ERV1 -76 410 1 320 347 91 21 chr2 1736947 1737232 -251519351 - L1M4 LINE L1 -1674 4472 4168 2310 53 0 0 chr2 1737237 1737501 -251519082 - AluY SINE Alu -46 265 2 256 109 0 0 chr2 1737507 1737553 -251519030 - L1P LINE L1 -3060 3086 3041 1167 94 0 13 chr2 1737559 1737708 -251518875 - AluSg SINE Alu -163 147 1 4073 199 17 3 chr2 1737708 1738603 -251517980 - L1 LINE L1 -1349 4797 3891 207 185 42 17 chr2 1738749 1738823 -251517760 - MIR SINE MIR -72 136 59 2616 61 0 3 chr2 1738848 1739160 -251517423 + AluY SINE Alu 1 311 0 207 0 0 0 chr2 1739404 1739427 -251517156 + (A)n Simple_repeat Simple_repeat 1 23 0 2541 91 0 0 chr2 1741429 1741738 -251514845 + AluSx SINE Alu 1 309 -3 2534 71 0 3 chr2 1743192 1743502 -251513081 - AluY SINE Alu -2 309 1 27 62 0 0 chr2 1743639 1743687 -251512896 + AT_rich Low_complexity Low_complexity 1 48 0 232 301 18 0 chr2 1743744 1743857 -251512726 + (TA)n Simple_repeat Simple_repeat 1 115 0 2330 97 0 7 chr2 1743939 1744238 -251512345 - AluSg SINE Alu -13 297 1 342 241 21 0 chr2 1744257 1744347 -251512236 + L1MC4 LINE L1 6550 6702 -1140 * 345 269 0 0 chr2 1744318 1744396 -251512187 - L1MC4 LINE L1 -1339 6703 6626 1077 68 0 0 chr2 1745402 1745534 -251511049 - AluSc SINE Alu -2 307 176 2316 96 0 3 chr2 1745950 1746243 -251510340 - AluSc SINE Alu -17 292 1 955 77 0 0 chr2 1746244 1746361 -251510222 - AluSc SINE Alu -192 117 1 1009 172 95 3 chr2 1747518 1747931 -251508652 + L1PA16 LINE L1 5926 6352 0 2032 89 4 0 chr2 1748541 1748789 -251507794 - AluSx SINE Alu -63 249 1 2287 102 10 0 chr2 1749401 1749695 -251506888 + AluSp SINE Alu 1 297 -16 2166 112 44 0 chr2 1750253 1750548 -251506035 + AluSx SINE Alu 3 310 -2 631 284 53 86 chr2 1751101 1751460 -251505123 + MER68 LTR ERV1 1 347 -215 2416 107 8 0 chr2 1751517 1751883 -251504700 - L1PB1 LINE L1 -1 6150 5782 343 344 0 0 chr2 1751908 1751998 -251504585 - L1MC4 LINE L1 -1339 6703 6614 * 351 225 25 25 chr2 1751947 1752027 -251504556 + L1MC4 LINE L1 6615 6694 -1348 386 287 67 0 chr2 1752134 1752284 -251504299 + L1M3f LINE L1 657 816 -4512 2167 131 3 10 chr2 1752284 1752598 -251503985 + AluSx SINE Alu 1 312 0 511 130 20 10 chr2 1752600 1752700 -251503883 + GA-rich Low_complexity Low_complexity 3 103 0 598 13 25 0 chr2 1752806 1752885 -251503698 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 181 218 18 18 chr2 1753130 1753185 -251503398 - MIR SINE MIR -72 136 82 1443 216 7 0 chr2 1754779 1755061 -251501522 - ERVL LTR ERVL -1987 3777 3494 2397 102 0 0 chr2 1755156 1755460 -251501123 - AluSq SINE Alu -8 305 2 1379 182 4 16 chr2 1755473 1755720 -251500863 - ERVL LTR ERVL -2424 3340 3097 560 157 0 0 chr2 1755720 1755809 -251500774 - AluSg/x SINE Alu -15 295 207 2629 56 0 0 chr2 1755830 1756135 -251500448 - AluY SINE Alu -6 305 1 2156 117 0 13 chr2 1757132 1757432 -251499151 + AluSx SINE Alu 1 296 -16 2115 106 0 11 chr2 1757434 1757762 -251498821 + AluSg SINE Alu 1 325 0 643 166 101 0 chr2 1759343 1759482 -251497101 - L1MB5 LINE L1 -87 6087 5935 343 210 12 17 chr2 1759482 1759582 -251497001 + MER4D LTR ERV1 518 611 -168 430 123 27 0 chr2 1760846 1760919 -251495664 - FLAM_A SINE Alu -25 117 43 2637 40 0 7 chr2 1761475 1761779 -251494804 - AluY SINE Alu -9 302 1 2333 100 0 0 chr2 1762364 1762663 -251493920 + AluSx SINE Alu 1 299 -13 277 209 15 0 chr2 1763067 1763134 -251493449 - MIR SINE MIR -72 136 69 412 209 48 0 chr2 1763826 1763931 -251492652 + L1 LINE L1 3821 3930 -2216 1672 204 38 58 chr2 1764093 1764510 -251492073 + LTR2 LTR ERV1 41 449 0 3385 257 50 13 chr2 1764685 1766293 -251490290 - L1PBb LINE L1 -2082 4766 1008 482 272 51 31 chr2 1766478 1766732 -251489851 - L1PBb LINE L1 -5791 1058 800 262 220 17 0 chr2 1766816 1766875 -251489708 - L1PBb LINE L1 -6032 817 758 403 332 54 19 chr2 1767329 1767534 -251489049 - L1PBb LINE L1 -6428 421 210 380 282 178 0 chr2 1767676 1767878 -251488705 - L1PBb LINE L1 -6602 247 10 459 325 48 72 chr2 1768072 1768448 -251488135 - L1MEd LINE L1 -4901 1218 852 872 225 14 96 chr2 1768781 1769061 -251487522 + LTR42 LTR ERVL 3 259 -236 231 343 66 12 chr2 1769290 1769456 -251487127 + MER65A LTR ERV1 175 349 -96 * 2581 196 51 9 chr2 1769453 1769979 -251486604 - MER21A LTR ERV1 -8 923 376 1175 189 86 4 chr2 1769984 1770228 -251486355 - MER21A LTR ERV1 -667 264 1 851 314 4 4 chr2 1770315 1770554 -251486029 - MER8 DNA MER2_type 0 239 1 704 178 92 6 chr2 1770724 1770887 -251485696 + LTR42 LTR ERVL 315 491 -4 221 266 105 28 chr2 1775303 1775446 -251481137 + MIR3 SINE MIR 35 188 -20 344 271 51 11 chr2 1775622 1775840 -251480743 + MIR3 SINE MIR 15 243 -19 258 95 0 0 chr2 1775931 1775973 -251480610 + (TCC)n Simple_repeat Simple_repeat 1 42 0 477 298 148 22 chr2 1777164 1777611 -251478972 - L2 LINE L2 -1 3312 2810 1228 342 65 31 chr2 1778303 1778900 -251477683 + L1M4 LINE L1 2843 3473 -2673 417 86 0 0 chr2 1778900 1778958 -251477625 + (TG)n Simple_repeat Simple_repeat 1 58 0 1228 342 65 31 chr2 1778958 1779111 -251477472 + L1M4 LINE L1 3473 3619 -2527 1408 165 8 15 chr2 1779116 1779376 -251477207 + AluSx SINE Alu 3 260 -52 1329 201 15 6 chr2 1779396 1779725 -251476858 - L1 LINE L1 -1439 4707 4376 285 27 27 0 chr2 1779727 1779764 -251476819 + L1P5 LINE L1 5835 5872 -279 1040 134 0 0 chr2 1779768 1779917 -251476666 - AluJb SINE Alu -163 149 1 239 173 39 0 chr2 1780723 1780775 -251475808 - MIR SINE MIR -72 136 83 311 82 0 0 chr2 1782259 1782308 -251474275 + L1PB1 LINE L1 5342 5390 -761 2551 96 13 34 chr2 1782319 1782703 -251473880 + L1PB1 LINE L1 5776 6151 0 812 218 12 6 chr2 1782760 1782978 -251473605 - L1MB5 LINE L1 -293 5881 5659 1491 172 41 4 chr2 1782988 1783280 -251473303 - AluSx SINE Alu 0 307 6 255 254 54 0 chr2 1783913 1784043 -251472540 - Charlie2 DNA MER1_type -286 2576 2440 * 592 234 85 21 chr2 1784038 1784273 -251472310 - Charlie2 DNA MER1_type -577 2285 2036 1018 262 30 7 chr2 1784806 1785077 -251471506 + L1MB7 LINE L1 5887 6163 -21 1909 128 0 3 chr2 1785151 1785433 -251471150 + AluSq SINE Alu 1 281 -32 714 322 72 19 chr2 1785459 1785835 -251470748 + L1MCc LINE L1 50 445 -5978 585 260 36 49 chr2 1786077 1786300 -251470283 + L1MCc LINE L1 761 980 -5443 390 331 8 0 chr2 1786375 1786505 -251470078 + ERVL LTR ERVL 4147 4277 -1487 2230 104 7 0 chr2 1786963 1787272 -251469311 + AluSq SINE Alu 1 311 -2 1498 263 34 47 chr2 1787689 1787993 -251468590 + MLT1C LTR MaLR 2 299 -168 2433 65 0 3 chr2 1787993 1788303 -251468280 + AluY SINE Alu 1 309 -2 1498 263 34 47 chr2 1788303 1788470 -251468113 + MLT1C LTR MaLR 299 467 0 565 172 10 10 chr2 1788761 1788860 -251467723 + U6 snRNA snRNA 5 103 -4 350 62 0 62 chr2 1789026 1789090 -251467493 - AluSp/q SINE Alu 0 303 244 1240 93 0 0 chr2 1789090 1789252 -251467331 - AluSc SINE Alu -25 284 123 380 283 0 11 chr2 1789272 1789364 -251467219 - L1MC4 LINE L1 -1338 6704 6614 * 403 232 0 53 chr2 1789285 1789380 -251467203 + L1MC4 LINE L1 6614 6703 -1339 315 221 29 15 chr2 1789335 1789403 -251467180 - L1MCa LINE L1 -4362 2064 1996 * 300 238 59 50 chr2 1789465 1789566 -251467017 + L1MCc LINE L1 2478 2579 -4362 * 371 312 0 18 chr2 1789530 1789639 -251466944 - L1MC4 LINE L1 -1322 6720 6614 312 214 43 29 chr2 1789692 1789762 -251466821 - L1MCa LINE L1 -4361 2065 1995 301 337 0 22 chr2 1789693 1789782 -251466801 + L1MC4 LINE L1 6617 6703 -1339 * 354 252 0 28 chr2 1789781 1789888 -251466695 - L1MCa LINE L1 -1339 6983 1995 228 239 23 0 chr2 1789900 1789988 -251466595 - L1MC4 LINE L1 -1339 6703 6614 321 305 10 0 chr2 1790000 1790099 -251466484 - L1MC4 LINE L1 -1339 6983 1996 * 324 212 45 0 chr2 1790072 1790138 -251466445 - L1MC4 LINE L1 -4362 2064 1996 396 237 60 0 chr2 1790166 1790268 -251466315 - L1MC4 LINE L1 -1339 6983 1986 252 140 80 0 chr2 1790297 1790347 -251466236 + MLT2A1 LTR ERVL 391 444 0 2022 281 81 7 chr2 1790347 1790937 -251465646 - L1M2a LINE L1 -6376 792 159 2092 221 11 33 chr2 1790938 1791218 -251465365 + L1PA15-16 LINE L1 1771 2056 -4741 2230 102 3 6 chr2 1791218 1791531 -251465052 + AluSq SINE Alu 1 312 -1 2092 221 11 33 chr2 1791531 1791974 -251464609 + L1PA15-16 LINE L1 2056 2488 -4309 420 56 0 0 chr2 1791974 1792028 -251464555 - Alu SINE Alu -11 300 247 5565 205 62 11 chr2 1792042 1792248 -251464335 + L1M1 LINE L1 271 465 -7100 2130 124 0 3 chr2 1792248 1792555 -251464028 - AluSg SINE Alu -4 306 1 5565 205 62 11 chr2 1792555 1793486 -251463097 + L1M1 LINE L1 465 1465 -6100 2289 82 0 7 chr2 1793487 1793814 -251462769 - AluSp SINE Alu 0 313 2 2338 75 0 28 chr2 1793933 1794253 -251462330 - AluY SINE Alu 0 311 1 322 266 37 40 chr2 1794430 1794570 -251462013 + L1MC4 LINE L1 1919 6983 -1339 1417 210 0 7 chr2 1794571 1794857 -251461726 - AluJo SINE Alu -26 286 3 211 250 29 15 chr2 1798890 1798958 -251457625 + MIR3 SINE MIR 93 161 -47 349 274 58 2 chr2 1799087 1799245 -251457338 + MIR SINE MIR 21 187 -65 374 288 40 19 chr2 1799556 1799790 -251456793 + MIR SINE MIR 10 250 -12 195 42 0 0 chr2 1799885 1799909 -251456674 + (TCC)n Simple_repeat Simple_repeat 1 24 0 543 297 149 14 chr2 1801064 1801508 -251455075 - L2 LINE L2 0 3313 2810 682 329 105 19 chr2 1802215 1802643 -251453940 + L1M4 LINE L1 2855 3319 -2827 477 103 64 0 chr2 1802657 1802735 -251453848 - L1PA13 LINE L1 0 6163 6081 2199 78 3 0 chr2 1802755 1803062 -251453521 - AluSx SINE Alu 0 308 1 2081 100 3 47 chr2 1803590 1803932 -251452651 - AluY SINE Alu 0 311 1 1700 158 3 7 chr2 1803936 1804220 -251452363 - AluJb SINE Alu -21 291 9 1265 105 18 11 chr2 1804787 1804999 -251451584 - MLT2A2 LTR ERVL 0 453 286 368 282 35 38 chr2 1805220 1805447 -251451136 + MIR SINE MIR 10 243 -19 1633 136 20 37 chr2 1805775 1806069 -251450514 - AluJb SINE Alu -11 301 13 1650 154 0 25 chr2 1806122 1806407 -251450176 + AluJb SINE Alu 19 296 -16 234 0 0 0 chr2 1806407 1806433 -251450150 + (TA)n Simple_repeat Simple_repeat 2 27 0 2421 47 7 0 chr2 1806976 1807275 -251449308 - AluY SINE Alu -10 301 1 2255 102 0 9 chr2 1807778 1808093 -251448490 - AluSx SINE Alu 0 312 1 198 0 0 0 chr2 1809132 1809154 -251447429 + (TA)n Simple_repeat Simple_repeat 2 23 0 1278 221 3 0 chr2 1809172 1809457 -251447126 - AluJo SINE Alu -19 293 8 481 333 23 27 chr2 1814011 1814230 -251442353 - L1MCc LINE L1 -5978 445 228 513 311 118 52 chr2 1814345 1814476 -251442107 + L1ME3 LINE L1 5480 5601 -561 1999 111 3 55 chr2 1814476 1814801 -251441782 + AluSg SINE Alu 1 308 -2 513 311 118 52 chr2 1814801 1815135 -251441448 + L1ME3 LINE L1 5601 5976 -186 4316 185 24 23 chr2 1815310 1815440 -251441143 - L1MA4 LINE L1 -7 6293 6165 1877 141 3 0 chr2 1815440 1815731 -251440852 - AluSx SINE Alu -20 292 1 4316 185 24 23 chr2 1815731 1816466 -251440117 - L1MA4 LINE L1 -135 6165 5427 3760 203 21 5 chr2 1817219 1818153 -251438430 + L1 LINE L1 4342 5290 -856 355 312 51 65 chr2 1819310 1819586 -251436997 - L1MEd LINE L1 -4920 1199 928 1945 137 0 3 chr2 1819600 1819892 -251436691 - AluSq SINE Alu -20 293 3 1322 230 3 0 chr2 1820897 1821201 -251435382 - AluJo SINE Alu 0 312 8 184 295 16 0 chr2 1822718 1822779 -251433804 + MIR SINE MIR 82 143 -65 755 189 53 6 chr2 1823218 1823387 -251433196 - LTR42 LTR ERVL -4 491 315 213 39 0 0 chr2 1823505 1823531 -251433052 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 928 289 4 4 chr2 1823558 1823790 -251432793 + MER8 DNA MER2_type 2 233 -6 2075 215 71 9 chr2 1823882 1824513 -251432070 + MER21A LTR ERV1 1 782 -149 949 56 0 0 chr2 1824507 1824632 -251431951 + LTR10C LTR ERV1 96 220 -371 * 21 36 0 0 chr2 1826098 1826126 -251430457 + AT_rich Low_complexity Low_complexity 1 28 0 1965 215 88 19 chr2 1826295 1826761 -251429822 + L1P LINE L1 11 508 -5638 1424 210 4 4 chr2 1827085 1827361 -251429222 - AluJo SINE Alu -26 286 11 2138 105 32 0 chr2 1829269 1829554 -251427029 + AluSg1 SINE Alu 1 294 -15 1108 36 7 0 chr2 1830547 1830685 -251425898 - L1PA4 LINE L1 -2 6153 6015 563 206 201 40 chr2 1831047 1831246 -251425337 - MLT1D LTR MaLR -3 502 272 208 308 0 0 chr2 1831246 1831311 -251425272 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 190 257 115 35 chr2 1933453 1933566 -251323017 - MER5C DNA MER1_type -202 122 1 972 264 54 20 chr2 1934150 1934502 -251322081 + MLT1A1 LTR MaLR 2 365 0 568 241 41 6 chr2 1935758 1935928 -251320655 - MLT1B LTR MaLR -6 384 209 238 83 0 56 chr2 1936023 1936059 -251320524 - MLT1B LTR MaLR -356 34 1 517 274 148 16 chr2 1936800 1937173 -251319410 + L2 LINE L2 2244 2665 -649 1073 163 24 0 chr2 1938263 1938472 -251318111 + L1MA4 LINE L1 6081 6294 -6 383 200 0 11 chr2 1938480 1938570 -251318013 + GA-rich Low_complexity Low_complexity 3 91 0 396 0 0 0 chr2 1939388 1939432 -251317151 + (TG)n Simple_repeat Simple_repeat 1 44 0 2007 104 54 17 chr2 1941157 1941455 -251315128 - AluY SINE Alu -2 309 1 406 311 67 16 chr2 1942384 1942577 -251314006 - MIR SINE MIR -51 211 9 558 238 41 74 chr2 1942595 1942960 -251313623 - L1MC5 LINE L1 -35 7926 7574 239 253 13 0 chr2 1943565 1943644 -251312939 + GA-rich Low_complexity Low_complexity 1 80 0 544 161 8 15 chr2 1943667 1943797 -251312786 + GA-rich Low_complexity Low_complexity 4 132 0 292 264 56 16 chr2 1944718 1944843 -251311740 + MIR SINE MIR 89 218 -44 249 282 84 0 chr2 1945035 1945106 -251311477 - MIR3 SINE MIR -37 171 95 2314 113 50 14 chr2 1945186 1945548 -251311035 + THE1C LTR MaLR 1 375 0 309 350 122 0 chr2 1945928 1946108 -251310475 + L3 LINE CR1 1284 1485 -92 209 310 11 23 chr2 1946377 1946464 -251310119 + L2 LINE L2 3227 3312 -1 313 308 58 24 chr2 1946724 1946932 -251309651 + L1ME LINE L1 5590 5804 -317 2024 135 0 0 chr2 1946978 1947260 -251309323 + AluSx SINE Alu 1 282 -30 26 30 0 0 chr2 1947456 1947489 -251309094 + AT_rich Low_complexity Low_complexity 1 33 0 218 213 82 0 chr2 1948058 1948119 -251308464 + MIR SINE MIR 107 172 -90 2016 98 10 49 chr2 1948895 1949201 -251307382 - AluSc SINE Alu -15 294 1 2126 133 0 3 chr2 1950159 1950467 -251306116 - AluSg SINE Alu -3 307 1 234 116 0 0 chr2 1951132 1951175 -251305408 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 80 8 0 chr2 1951202 1951451 -251305132 + AluSp SINE Alu 43 293 -20 255 243 0 43 chr2 1951782 1951852 -251304731 + MIR3 SINE MIR 126 192 -16 406 315 118 0 chr2 1952313 1952516 -251304067 - MIR SINE MIR -28 234 8 794 192 83 33 chr2 1952680 1952920 -251303663 + Charlie5 DNA MER1_type 2334 2585 -27 449 253 59 24 chr2 1954871 1955041 -251301542 + MER5B DNA MER1_type 3 178 0 247 271 52 84 chr2 1959152 1959307 -251297276 + L3 LINE CR1 1426 1575 -2 978 107 0 0 chr2 1959713 1959890 -251296693 + (GA)n Simple_repeat Simple_repeat 2 178 0 637 159 0 12 chr2 1959891 1960061 -251296522 + GA-rich Low_complexity Low_complexity 2 169 0 236 240 10 0 chr2 1960077 1960177 -251296406 + GA-rich Low_complexity Low_complexity 2 102 0 2323 97 0 3 chr2 1963029 1963337 -251293246 - AluSc SINE Alu -2 307 1 218 266 16 0 chr2 1965379 1965461 -251291122 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 185 304 38 0 chr2 1965592 1965671 -251290912 - L2 LINE L2 -7 3306 3225 21 0 0 0 chr2 1965711 1965732 -251290851 + AT_rich Low_complexity Low_complexity 1 21 0 1860 144 29 13 chr2 1965733 1966039 -251290544 + AluJo SINE Alu 1 311 -1 451 248 57 0 chr2 1968853 1968958 -251287625 - MER58A DNA MER1_type 0 114 4 711 173 74 20 chr2 1969078 1969280 -251287303 + MER33 DNA MER1_type 21 233 -91 1758 148 184 11 chr2 1969754 1970119 -251286464 - MSTA LTR MaLR 0 428 1 313 226 22 50 chr2 1972122 1972303 -251284280 + (CACTA)n Simple_repeat Simple_repeat 4 179 0 215 277 0 58 chr2 1972279 1972467 -251284116 + (CACTC)n Simple_repeat Simple_repeat 2 178 0 * 240 284 0 62 chr2 1972376 1972552 -251284031 + (CACTT)n Simple_repeat Simple_repeat 3 167 0 * 302 224 18 64 chr2 1972435 1973012 -251283571 + (CACTA)n Simple_repeat Simple_repeat 1 550 0 215 283 6 50 chr2 1973265 1973424 -251283159 + (CACTC)n Simple_repeat Simple_repeat 2 153 0 279 227 0 57 chr2 1973424 1973600 -251282983 + (CTATA)n Simple_repeat Simple_repeat 1 166 0 329 230 0 73 chr2 1973694 1973885 -251282698 + (CTACT)n Simple_repeat Simple_repeat 3 179 0 276 245 0 58 chr2 1974025 1974213 -251282370 + (CTATA)n Simple_repeat Simple_repeat 1 177 0 205 274 0 60 chr2 1974274 1974442 -251282141 + (CTTTA)n Simple_repeat Simple_repeat 5 162 0 394 218 0 52 chr2 1974494 1974668 -251281915 + (CACTA)n Simple_repeat Simple_repeat 3 167 0 1722 167 0 7 chr2 1976514 1976789 -251279794 + AluJb SINE Alu 1 273 -39 180 0 0 0 chr2 1978737 1978757 -251277826 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1053 117 0 0 chr2 1978757 1978902 -251277681 - L1PA10 LINE L1 -19 6149 6005 2101 131 0 0 chr2 1978902 1979237 -251277346 + L1P LINE L1 4681 5015 -1131 2077 133 0 22 chr2 1980986 1981302 -251275281 - AluY SINE Alu -2 309 1 26 74 0 0 chr2 1981775 1981829 -251274754 + AT_rich Low_complexity Low_complexity 1 54 0 192 77 0 0 chr2 1983938 1983964 -251272619 + (TA)n Simple_repeat Simple_repeat 2 27 0 277 301 18 9 chr2 1991052 1991165 -251265418 + GA-rich Low_complexity Low_complexity 1 114 0 24 0 0 0 chr2 1992006 1992030 -251264553 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 1992505 1992527 -251264056 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr2 1995895 1995931 -251260652 + (CA)n Simple_repeat Simple_repeat 2 37 0 302 138 17 0 chr2 1996448 1996506 -251260077 + (TG)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 1997407 1997431 -251259152 + (TC)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 1997433 1997458 -251259125 + (CA)n Simple_repeat Simple_repeat 1 25 0 226 244 0 0 chr2 1997906 1997951 -251258632 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 192 97 0 0 chr2 1998842 1998873 -251257710 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1501 153 91 28 chr2 1999977 2000264 -251256319 + MER1B DNA MER1_type 35 339 0 26 0 0 0 chr2 2000624 2000650 -251255933 + AT_rich Low_complexity Low_complexity 1 26 0 248 375 0 0 chr2 2001002 2001090 -251255493 + LTR67 LTR ERVL 108 195 -362 753 209 0 0 chr2 2001977 2002111 -251254472 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 2002112 2002514 -251254069 + L1PA4 LINE L1 5752 6153 -2 552 63 13 0 chr2 2002593 2002672 -251253911 - L1PA4 LINE L1 -3 6152 6073 281 258 50 17 chr2 2004155 2004275 -251252308 + LTR67 LTR ERVL 434 557 0 306 256 202 8 chr2 2004878 2005007 -251251576 + MER5A DNA MER1_type 36 189 0 607 225 144 32 chr2 2005015 2005178 -251251405 - MER33 DNA MER1_type -2261 324 181 2209 104 3 0 chr2 2005178 2005475 -251251108 - AluSp SINE Alu -15 298 1 2118 122 3 0 chr2 2005475 2005763 -251250820 - AluSg SINE Alu -21 289 1 607 225 144 32 chr2 2005763 2005882 -251250701 - MER33 DNA MER1_type -2403 182 9 296 245 157 20 chr2 2006855 2006957 -251249626 - MIR3 SINE MIR -6 202 87 340 173 0 19 chr2 2006962 2007066 -251249517 + GA-rich Low_complexity Low_complexity 1 102 0 548 295 50 42 chr2 2009184 2009425 -251247158 + MIR SINE MIR 12 254 -8 1331 230 65 68 chr2 2010140 2010858 -251245725 - L1MC5 LINE L1 -697 7264 6542 2057 134 90 3 chr2 2010875 2011210 -251245373 - THE1B LTR MaLR 0 364 1 306 73 0 0 chr2 2012069 2012110 -251244473 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 2013005 2013027 -251243556 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 2013217 2013274 -251243309 + AT_rich Low_complexity Low_complexity 1 57 0 342 309 26 26 chr2 2015199 2015351 -251241232 - MIR SINE MIR 0 262 111 1740 80 16 0 chr2 2015373 2015723 -251240860 - L1P3 LINE L1 -634 5520 5167 823 30 20 0 chr2 2015725 2015826 -251240757 + L1PA7 LINE L1 6050 6152 -2 25 31 0 0 chr2 2016046 2016078 -251240505 + AT_rich Low_complexity Low_complexity 1 32 0 1049 99 43 0 chr2 2016228 2016369 -251240214 + AluSg/x SINE Alu 154 300 -12 776 256 94 3 chr2 2016912 2017221 -251239362 + L1MD3 LINE L1 7659 7995 0 641 76 11 0 chr2 2017434 2017526 -251239057 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 28 29 0 0 chr2 2017561 2017596 -251238987 + AT_rich Low_complexity Low_complexity 1 35 0 1964 222 0 22 chr2 2018223 2018722 -251237861 + L1PB4 LINE L1 2226 2713 -3433 200 59 29 0 chr2 2018737 2018771 -251237812 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1198 67 6 0 chr2 2018776 2018941 -251237642 - L1PA8A LINE L1 -28 6103 5938 10215 193 29 21 chr2 2018944 2022304 -251234279 + L1PB4 LINE L1 2703 6090 -66 273 172 0 0 chr2 2022356 2022414 -251234169 + L1PB4 LINE L1 6097 6154 -2 256 219 14 14 chr2 2022824 2022897 -251233686 - MLT2E LTR ERVL -525 103 31 616 277 27 31 chr2 2023593 2023817 -251232766 - MIR SINE MIR 0 262 40 3298 183 110 97 chr2 2023941 2024468 -251232115 - L1MC3 LINE L1 -60 7725 7206 248 220 30 40 chr2 2024468 2024568 -251232015 - MLT1F1 LTR MaLR -445 122 24 3298 183 110 97 chr2 2024568 2024608 -251231975 - L1MC3 LINE L1 -579 7206 7168 834 247 70 78 chr2 2024608 2025005 -251231578 + MSTD LTR MaLR 1 394 -2 3298 183 110 97 chr2 2025005 2025576 -251231007 - L1MC3 LINE L1 -617 7168 6499 1669 98 0 9 chr2 2026358 2026582 -251230001 - L1PA8 LINE L1 0 6172 5951 923 279 153 28 chr2 2027163 2027869 -251228714 + HAL1 LINE L1 841 1634 -873 239 0 32 0 chr2 2027873 2027904 -251228679 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 234 253 157 12 chr2 2028031 2028114 -251228469 + MLT1L LTR MaLR 196 290 -325 1060 308 107 36 chr2 2028359 2029164 -251227419 + HAL1 LINE L1 1646 2507 0 291 311 133 0 chr2 2029627 2029778 -251226805 - MLT1E2 LTR MaLR -144 482 312 628 261 39 93 chr2 2031397 2031753 -251224830 - MER46C DNA MER2_type 0 338 2 240 111 0 0 chr2 2031870 2031906 -251224677 + (CA)n Simple_repeat Simple_repeat 1 36 0 291 122 0 0 chr2 2033088 2033137 -251223446 + (TC)n Simple_repeat Simple_repeat 1 49 0 3152 178 85 15 chr2 2033451 2033685 -251222898 - L1MC1 LINE L1 0 6333 6117 2760 91 31 0 chr2 2033685 2034038 -251222545 + THE1B LTR MaLR 1 364 0 3152 178 85 15 chr2 2034038 2034473 -251222110 - L1MC1 LINE L1 -216 6117 5634 17556 83 4 12 chr2 2035044 2036989 -251219594 - L1PA7 LINE L1 -2 6152 4250 1714 81 0 136 chr2 2036989 2037299 -251219284 - AluY SINE Alu 0 311 44 17556 83 4 12 chr2 2037299 2038451 -251218132 - L1PA7 LINE L1 -1904 4250 3090 16932 123 14 21 chr2 2038451 2041196 -251215387 - L1P LINE L1 -2823 3323 598 371 329 71 19 chr2 2041480 2041690 -251214893 - MIR SINE MIR -1 261 41 221 325 0 24 chr2 2041948 2042019 -251214564 + L2 LINE L2 2323 2391 -923 319 241 44 95 chr2 2042019 2042177 -251214406 + MER5A DNA MER1_type 1 150 -39 274 313 141 50 chr2 2042202 2042620 -251213963 + L2 LINE L2 2397 2852 -462 188 310 31 78 chr2 2042802 2042931 -251213652 + MIR SINE MIR 65 187 -75 590 203 20 43 chr2 2043044 2043197 -251213386 + THE1C LTR MaLR 1 154 -262 9926 120 52 6 chr2 2043197 2044667 -251211916 + THE1C-int LTR MaLR 42 1579 -1 1838 144 88 31 chr2 2044670 2045023 -251211560 + THE1C LTR MaLR 3 375 0 828 290 90 24 chr2 2045920 2046599 -251209984 + L1M4 LINE L1 2972 3695 -2451 2155 169 40 33 chr2 2046741 2047287 -251209296 + MLT2A2 LTR ERVL 2 554 0 331 263 70 18 chr2 2047475 2047589 -251208994 + HAL1 LINE L1 22 141 -2366 388 302 35 12 chr2 2047770 2047942 -251208641 + HAL1 LINE L1 157 332 -2175 923 302 46 62 chr2 2047944 2048726 -251207857 + L2 LINE L2 2538 3310 -3 639 183 48 22 chr2 2048876 2049015 -251207568 - MLT1E1 LTR MaLR -6 637 406 653 360 115 10 chr2 2049061 2049555 -251207028 - L2 LINE L2 -482 2832 2287 231 337 123 16 chr2 2050340 2050527 -251206056 + L2 LINE L2 1876 2082 -1232 2136 89 13 23 chr2 2050580 2050905 -251205678 - AluY SINE Alu 0 322 1 1013 283 84 79 chr2 2051250 2051479 -251205104 + L2 LINE L2 2287 2514 -799 3401 66 0 0 chr2 2051479 2051887 -251204696 - L1PA8 LINE L1 0 6172 5765 1013 283 84 79 chr2 2051887 2052332 -251204251 + L2 LINE L2 2514 2956 -357 2568 156 46 2 chr2 2052332 2052742 -251203841 - MSTA LTR MaLR 0 428 1 6805 191 84 44 chr2 2052742 2054259 -251202324 - MSTA-int LTR MaLR 0 1580 3 2723 110 34 53 chr2 2054261 2054641 -251201942 - MSTA LTR MaLR 0 428 55 2257 95 0 46 chr2 2054641 2054966 -251201617 - AluSg SINE Alu 0 310 1 2723 110 34 53 chr2 2054966 2055021 -251201562 - MSTA LTR MaLR -373 55 1 1013 283 84 79 chr2 2055021 2055344 -251201239 + L2 LINE L2 2956 3313 0 374 320 39 20 chr2 2055671 2055824 -251200759 + MIR3 SINE MIR 27 182 -26 280 300 125 31 chr2 2056840 2057000 -251199583 - L2 LINE L2 0 3272 3098 257 122 0 0 chr2 2057166 2057207 -251199376 + AluSx SINE Alu 1 41 -259 2045 118 0 0 chr2 2057207 2057479 -251199104 + AluSx SINE Alu 19 290 -22 2233 81 0 0 chr2 2057486 2057809 -251198774 + AluY SINE Alu 9 331 0 1606 150 4 33 chr2 2058436 2058710 -251197873 + AluJo SINE Alu 38 303 -9 1185 209 41 55 chr2 2058742 2059103 -251197480 + MSTB2 LTR MaLR 41 457 0 236 333 0 0 chr2 2060648 2060714 -251195869 - L1MCc LINE L1 -3407 3534 3469 1407 208 19 55 chr2 2060745 2061130 -251195453 - MLT1A2 LTR MaLR -2 465 1 1216 253 65 46 chr2 2061228 2061950 -251194633 - L1MCc LINE L1 -4891 1532 1184 2306 108 0 0 chr2 2062024 2062320 -251194263 - AluSx SINE Alu -16 296 1 250 325 75 12 chr2 2062358 2062651 -251193932 + L1P LINE L1 4092 4408 -1738 22 0 0 0 chr2 2064423 2064445 -251192138 + AT_rich Low_complexity Low_complexity 1 22 0 2424 106 140 11 chr2 2066195 2066574 -251190009 - MSTA LTR MaLR 0 428 1 242 337 99 51 chr2 2066592 2067458 -251189125 + L2 LINE L2 1976 2883 -431 232 274 129 48 chr2 2067587 2067711 -251188872 + L2 LINE L2 3139 3272 0 757 300 64 54 chr2 2067749 2068172 -251188411 - L2 LINE L2 -2 3311 2885 305 289 33 0 chr2 2068474 2068595 -251187988 + L1ME4a LINE L1 5769 5893 -228 412 332 88 45 chr2 2069521 2070009 -251186574 + HAL1 LINE L1 597 1105 -1402 504 304 175 31 chr2 2070080 2070687 -251185896 + HAL1 LINE L1 1450 2193 -314 1689 193 116 30 chr2 2070687 2071117 -251185466 + MLT1C LTR MaLR 1 467 0 504 304 175 31 chr2 2071117 2071279 -251185304 + HAL1 LINE L1 2193 2330 -177 346 285 39 31 chr2 2071385 2071515 -251185068 - MIR SINE MIR -34 228 98 1242 151 130 50 chr2 2071519 2071818 -251184765 - L1MA6 LINE L1 -366 5934 5612 199 317 17 0 chr2 2071818 2071878 -251184705 - MIR SINE MIR -188 74 14 180 179 0 0 chr2 2072042 2072081 -251184502 + (TG)n Simple_repeat Simple_repeat 1 39 0 264 122 0 0 chr2 2072133 2072174 -251184409 - MADE1 DNA Mariner -39 41 1 966 288 137 24 chr2 2072222 2072805 -251183778 + L1ME3A LINE L1 5522 6170 0 1302 155 132 78 chr2 2072879 2073175 -251183408 + AluJb SINE Alu 1 312 0 2080 106 3 56 chr2 2073758 2074079 -251182504 + AluSg SINE Alu 1 304 -6 282 343 10 0 chr2 2074537 2074639 -251181944 - L1MCc LINE L1 -5984 439 337 2141 125 3 3 chr2 2076760 2077071 -251179512 - AluJo SINE Alu -1 311 1 180 289 105 13 chr2 2077277 2077353 -251179230 + L2 LINE L2 3200 3282 -31 2487 59 0 3 chr2 2077378 2077681 -251178902 + AluSq SINE Alu 1 302 -11 1782 73 4 9 chr2 2077683 2077916 -251178667 + AluSg SINE Alu 1 232 -78 263 119 24 0 chr2 2078016 2078058 -251178525 - AluJ/FLAM SINE Alu -239 63 21 2288 121 0 0 chr2 2078223 2078521 -251178062 + AluSq SINE Alu 1 298 -15 438 262 32 40 chr2 2079222 2079348 -251177235 - MIR3 SINE MIR -70 138 14 367 20 0 0 chr2 2079981 2080030 -251176553 - AluY SINE Alu 0 300 252 1145 66 66 0 chr2 2080030 2080182 -251176401 - AluSg/x SINE Alu -20 290 129 2342 102 0 10 chr2 2080191 2080505 -251176078 - AluSx SINE Alu -1 311 1 254 167 27 59 chr2 2080606 2080722 -251175861 + MSR1 Satellite Satellite 1 112 -25 1446 46 0 23 chr2 2080829 2081003 -251175580 - AluY SINE Alu -141 170 1 236 232 18 0 chr2 2081007 2081063 -251175520 + MER3 DNA MER1_type 153 209 0 260 277 127 41 chr2 2081075 2081295 -251175288 - L2 LINE L2 -1177 2137 1899 200 262 131 0 chr2 2081459 2081520 -251175063 - MIR SINE MIR -61 147 79 291 230 0 52 chr2 2081617 2081791 -251174792 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 314 223 0 51 chr2 2081807 2081982 -251174601 + (CCCCAG)n Simple_repeat Simple_repeat 1 166 0 299 236 0 52 chr2 2082035 2082209 -251174374 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 198 347 53 32 chr2 2083885 2083980 -251172603 + L2 LINE L2 3200 3296 -17 23 62 0 0 chr2 2086390 2086422 -251170161 + GC_rich Low_complexity Low_complexity 1 32 0 543 83 0 0 chr2 2086586 2086658 -251169925 + Alu SINE Alu 230 301 -9 355 282 105 24 chr2 2086660 2086784 -251169799 - MIR SINE MIR -21 241 108 244 272 71 71 chr2 2087082 2087251 -251169332 + L2 LINE L2 2938 3106 -166 285 98 0 0 chr2 2088908 2088949 -251167634 + (CA)n Simple_repeat Simple_repeat 2 42 0 1586 129 113 4 chr2 2089349 2089440 -251167143 + AluSx SINE Alu 25 105 -207 2143 93 7 0 chr2 2089440 2089751 -251166832 + AluSg SINE Alu 1 313 0 1586 129 113 4 chr2 2089751 2089914 -251166669 + AluSx SINE Alu 105 308 -4 1041 185 158 68 chr2 2089916 2090050 -251166533 + AluJo SINE Alu 1 121 -181 2237 115 3 3 chr2 2090050 2090346 -251166237 + AluSg SINE Alu 1 296 -14 1041 185 158 68 chr2 2090346 2090476 -251166107 + AluJo SINE Alu 121 289 -13 551 197 63 0 chr2 2091047 2091174 -251165409 - Charlie1 DNA MER1_type 0 2761 2627 546 237 103 5 chr2 2091176 2091370 -251165213 - Charlie1 DNA MER1_type -2547 214 2 194 270 95 14 chr2 2092367 2092441 -251164142 - MIR SINE MIR -72 190 111 762 218 98 10 chr2 2092810 2093003 -251163580 - MIR SINE MIR -23 239 30 412 279 165 32 chr2 2093048 2093417 -251163166 - L2 LINE L2 -7 3265 2848 1174 59 0 0 chr2 2093797 2093932 -251162651 + AluSq/x SINE Alu 1 135 -178 1745 134 59 66 chr2 2093932 2094237 -251162346 + AluSx SINE Alu 1 303 -9 2238 91 18 0 chr2 2094239 2094524 -251162059 + AluSq SINE Alu 2 291 -22 1399 138 153 15 chr2 2094543 2094804 -251161779 + AluJo SINE Alu 1 297 -15 345 275 22 11 chr2 2094804 2094895 -251161688 + MIR SINE MIR 59 150 -112 2029 156 0 0 chr2 2095041 2095329 -251161254 + AluJb SINE Alu 1 288 -24 525 238 79 114 chr2 2095442 2095732 -251160851 - L1ME LINE L1 -380 5790 5511 1605 187 74 19 chr2 2095759 2096122 -251160461 - MSTB1 LTR MaLR -6 426 44 3033 56 0 0 chr2 2096122 2096495 -251160088 - L1PA7 LINE L1 0 6154 5782 2705 48 0 0 chr2 2098336 2098647 -251157936 - AluY SINE Alu 0 311 1 236 330 50 0 chr2 2098991 2099091 -251157492 + L2 LINE L2 3202 3306 -7 1245 314 66 76 chr2 2100902 2101475 -251155108 - L1M4 LINE L1 -2053 4093 3533 228 111 0 0 chr2 2101475 2101511 -251155072 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1245 314 66 76 chr2 2101511 2101908 -251154675 - L1M4 LINE L1 -2613 3533 3133 22 56 0 0 chr2 2102167 2102203 -251154380 + AT_rich Low_complexity Low_complexity 1 36 0 989 248 13 9 chr2 2102296 2102614 -251153969 + L1 LINE L1 4304 4622 -1524 216 342 13 0 chr2 2102726 2102805 -251153778 + MIR SINE MIR 164 243 -19 22 0 0 0 chr2 2102939 2102961 -251153622 + AT_rich Low_complexity Low_complexity 1 22 0 645 227 51 60 chr2 2103760 2103976 -251152607 + MER20 DNA MER1_type 4 217 -2 305 302 65 51 chr2 2105281 2105556 -251151027 + HERVL LTR ERVL 5002 5280 -374 511 293 70 64 chr2 2106238 2106566 -251150017 + L1MC/D LINE L1 4039 4368 -1778 234 304 177 6 chr2 2106576 2106734 -251149849 - LTR33 LTR ERVL -8 513 329 448 363 46 31 chr2 2107115 2107440 -251149143 + L1MC/D LINE L1 4507 4836 -1310 708 269 48 35 chr2 2107527 2107754 -251148829 - MIR SINE MIR -7 255 26 25 65 0 0 chr2 2107820 2107866 -251148717 + AT_rich Low_complexity Low_complexity 1 46 0 444 272 32 13 chr2 2108075 2108233 -251148350 + L1MC/D LINE L1 5315 5475 -2333 590 281 45 45 chr2 2108349 2108570 -251148013 + L2 LINE L2 2650 2870 -444 645 245 119 42 chr2 2108598 2108884 -251147699 - L1ME3A LINE L1 -18 6152 5845 1285 203 33 46 chr2 2109488 2109794 -251146789 + AluJo SINE Alu 1 302 0 5216 30 0 2 chr2 2110188 2110794 -251145789 - L1PA4 LINE L1 -1 6154 5550 1314 111 11 69 chr2 2110904 2111166 -251145417 - L1MA9 LINE L1 0 6312 6066 22 0 0 0 chr2 2111536 2111558 -251145025 + AT_rich Low_complexity Low_complexity 1 22 0 248 330 37 9 chr2 2111711 2111820 -251144763 + MIR SINE MIR 51 162 -100 4416 227 64 25 chr2 2111824 2112047 -251144536 + L1MB8 LINE L1 3722 3935 -2249 207 0 0 0 chr2 2112047 2112070 -251144513 + (TAA)n Simple_repeat Simple_repeat 1 23 0 4416 227 64 25 chr2 2112070 2113348 -251143235 + L1MB8 LINE L1 3935 5323 -861 1979 123 87 98 chr2 2113348 2113786 -251142797 - Tigger2a DNA MER2_type -1 433 1 4416 227 64 25 chr2 2113786 2114269 -251142314 + L1MB8 LINE L1 5323 5786 -398 364 237 34 17 chr2 2114389 2114507 -251142076 + L1MB8 LINE L1 6039 6158 -20 1520 240 9 3 chr2 2114507 2114857 -251141726 + MLT1A1 LTR MaLR 1 352 -13 19047 167 30 15 chr2 2114993 2115370 -251141213 - L1 LINE L1 -3789 3776 3406 189 94 0 0 chr2 2115370 2115402 -251141181 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 19047 167 30 15 chr2 2115402 2116418 -251140165 - L1 LINE L1 -4159 3406 2407 2033 116 25 3 chr2 2116418 2116702 -251139881 + AluSq SINE Alu 1 290 -23 19047 167 30 15 chr2 2116702 2118210 -251138373 - L1 LINE L1 -5158 2407 804 1533 127 19 0 chr2 2118210 2118423 -251138160 + AluSp SINE Alu 89 305 -8 19047 167 30 15 chr2 2118423 2119228 -251137355 - L1 LINE L1 -6761 804 13 673 334 59 100 chr2 2119229 2120038 -251136545 + L1ME3A LINE L1 5394 6169 -1 1107 304 127 22 chr2 2120325 2121111 -251135472 - L2 LINE L2 -665 2649 1781 211 213 21 0 chr2 2121138 2121185 -251135398 + L2 LINE L2 3266 3313 0 1239 175 0 0 chr2 2121880 2122086 -251134497 - AluJb SINE Alu -1 311 106 719 317 98 31 chr2 2122096 2122511 -251134072 + L1ME LINE L1 3369 3808 -2338 37 81 0 0 chr2 2122518 2122604 -251133979 + AT_rich Low_complexity Low_complexity 1 86 0 404 212 16 43 chr2 2122782 2122966 -251133617 + (TA)n Simple_repeat Simple_repeat 2 180 0 1684 270 97 46 chr2 2123061 2123574 -251133009 + L1ME LINE L1 3948 4433 -1713 2255 111 45 31 chr2 2123574 2123933 -251132650 - THE1B LTR MaLR 0 364 1 1684 270 97 46 chr2 2123933 2124780 -251131803 + L1ME LINE L1 4433 5378 -768 424 269 0 17 chr2 2125194 2125313 -251131270 + L1ME LINE L1 5643 5759 -411 824 257 117 18 chr2 2125534 2125876 -251130707 + L1ME LINE L1 5410 5785 -385 308 206 118 20 chr2 2126205 2126307 -251130276 - HAL1 LINE L1 -1423 1084 973 1361 31 12 0 chr2 2126891 2127053 -251129530 + L1PA5 LINE L1 5984 6147 -7 234 62 0 0 chr2 2127656 2127688 -251128895 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 42 0 0 chr2 2127935 2127959 -251128624 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 2136 118 0 17 chr2 2128310 2128671 -251127912 + AluSx SINE Alu 1 356 0 1414 214 67 38 chr2 2128805 2129254 -251127329 - MLT1C LTR MaLR -2 465 4 193 320 13 27 chr2 2129859 2129934 -251126649 - L2 LINE L2 -6 3307 3234 392 322 107 53 chr2 2130334 2131027 -251125556 - L1M4 LINE L1 -3218 2928 2199 3859 189 23 51 chr2 2131731 2132604 -251123979 + L1MA9 LINE L1 4940 5771 -541 270 0 0 0 chr2 2132604 2132634 -251123949 + (CA)n Simple_repeat Simple_repeat 1 30 0 3859 189 23 51 chr2 2132634 2133125 -251123458 + L1MA9 LINE L1 5771 6274 -38 328 289 62 57 chr2 2133499 2133869 -251122714 + LTR16A LTR ERVL 74 445 -5 545 320 42 14 chr2 2133875 2134159 -251122424 + HERV16 LTR ERVL 2 293 -4703 875 212 45 37 chr2 2134294 2134563 -251122020 - MLT1D LTR MaLR 0 505 235 502 324 52 0 chr2 2134730 2134943 -251121640 + HERV16 LTR ERVL 457 680 -4316 1532 312 64 18 chr2 2135047 2136318 -251120265 + HERV16 LTR ERVL 869 2293 -3072 396 0 0 0 chr2 2136318 2136362 -251120221 + (TA)n Simple_repeat Simple_repeat 2 45 0 1532 312 64 18 chr2 2136362 2136537 -251120046 + HERV16 LTR ERVL 2293 2458 -2907 566 142 9 9 chr2 2136637 2136743 -251119840 - MSTC LTR MaLR 0 428 323 12046 107 5 1 chr2 2136852 2138632 -251117951 - L1P3 LINE L1 -4676 1775 7 321 152 61 15 chr2 2138632 2138698 -251117885 - MSTB2 LTR MaLR -388 69 1 4025 210 50 1 chr2 2139790 2140770 -251115813 + L1MCa LINE L1 139 1166 -5260 3419 221 24 46 chr2 2140773 2141352 -251115231 + L1MB8 LINE L1 4599 5189 -989 306 24 0 0 chr2 2141352 2141393 -251115190 + L1PA4 LINE L1 6112 6152 -3 3419 221 24 46 chr2 2141393 2142330 -251114253 + L1MB8 LINE L1 5189 6011 -167 2210 78 0 0 chr2 2142330 2142598 -251113985 + AluY SINE Alu 29 296 -15 3419 221 24 46 chr2 2142598 2142748 -251113835 + L1MB8 LINE L1 6011 6163 -15 301 281 97 52 chr2 2143538 2143805 -251112778 - L2 LINE L2 -13 3300 3022 28 0 0 0 chr2 2144569 2144597 -251111986 + AT_rich Low_complexity Low_complexity 1 28 0 4778 0 81 0 chr2 2145686 2145929 -251110654 + L1MC2 LINE L1 5106 5325 -1019 4778 131 46 7 chr2 2145929 2146771 -251109812 + L1MC2 LINE L1 5461 6335 -9 4778 0 81 0 chr2 2146771 2146806 -251109777 + L1MC2 LINE L1 5325 6335 -9 343 278 120 1 chr2 2148450 2148609 -251107974 + HERV16 LTR ERVL 2972 3129 -2525 877 325 64 51 chr2 2149132 2150050 -251106533 + ERVL LTR ERVL 4474 5403 -361 253 284 0 0 chr2 2150056 2150130 -251106453 + L1MC4 LINE L1 6628 6701 -1341 252 271 38 128 chr2 2151114 2151247 -251105336 + L2 LINE L2 3150 3270 -2 213 305 118 37 chr2 2151244 2151431 -251105152 + L2 LINE L2 2183 2384 -930 * 279 321 81 48 chr2 2151904 2152379 -251104204 + L2 LINE L2 2593 3084 -188 271 313 45 36 chr2 2153742 2153854 -251102729 - L2 LINE L2 -19 3253 3141 302 308 0 0 chr2 2154118 2154222 -251102361 + (CA)n Simple_repeat Simple_repeat 1 104 0 196 324 28 19 chr2 2154655 2154763 -251101820 - L2 LINE L2 -1 3312 3204 254 339 84 46 chr2 2154883 2155506 -251101077 - L2 LINE L2 -185 3087 2444 388 292 41 19 chr2 2155511 2155762 -251100821 + L1ME4a LINE L1 5329 5582 -580 243 258 34 45 chr2 2156025 2156114 -251100469 + L2 LINE L2 3172 3259 -54 198 71 0 0 chr2 2156132 2156160 -251100423 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 188 358 83 46 chr2 2157045 2157154 -251099429 - L2 LINE L2 -18 3254 3142 2419 116 28 0 chr2 2157397 2157751 -251098832 + THE1B LTR MaLR 1 364 0 271 293 123 0 chr2 2159949 2160055 -251096528 + L2 LINE L2 3185 3303 -10 1335 162 33 114 chr2 2160418 2160752 -251095831 - AluYb8 SINE Alu -9 309 3 725 178 7 0 chr2 2162606 2162741 -251093842 + L1PB4 LINE L1 6013 6148 -8 3202 257 81 36 chr2 2162785 2163351 -251093232 - L1ME LINE L1 -458 5642 5103 2255 127 0 0 chr2 2163351 2163659 -251092924 - AluSg SINE Alu -2 308 1 3202 257 81 36 chr2 2163659 2165383 -251091200 - L1ME LINE L1 -997 5103 3237 266 214 0 0 chr2 2165579 2165635 -251090948 - MER58 DNA MER1_type -100 115 60 546 261 67 78 chr2 2165750 2166121 -251090462 - L1ME LINE L1 -4202 2059 1693 26 98 0 0 chr2 2166126 2166208 -251090375 + AT_rich Low_complexity Low_complexity 1 82 0 934 289 82 50 chr2 2166299 2167436 -251089147 - L1ME LINE L1 -4649 1433 378 228 135 0 0 chr2 2167706 2167743 -251088840 + (T)n Simple_repeat Simple_repeat 1 37 0 350 324 7 35 chr2 2168302 2168444 -251088139 - MER5A DNA MER1_type -22 167 30 300 337 141 9 chr2 2168510 2168851 -251087732 + L1ME4a LINE L1 5606 5991 -130 288 247 74 0 chr2 2169940 2170021 -251086562 - L2 LINE L2 -7 3306 3220 333 0 0 0 chr2 2171187 2171224 -251085359 + (TG)n Simple_repeat Simple_repeat 1 37 0 2194 114 0 7 chr2 2171872 2172178 -251084405 - AluSx SINE Alu -8 304 1 934 281 70 24 chr2 2172612 2173071 -251083512 - L1ME3A LINE L1 -5 6165 5686 987 293 100 21 chr2 2173083 2174108 -251082475 - L1ME3A LINE L1 -595 5575 4632 2140 120 0 10 chr2 2174108 2174120 -251082463 - AluSx SINE Alu -14 298 287 229 67 0 0 chr2 2174120 2174150 -251082433 + (TTTA)n Simple_repeat Simple_repeat 2 144 0 2140 120 0 10 chr2 2174150 2174438 -251082145 - AluSx SINE Alu -25 287 1 3222 165 16 40 chr2 2174447 2175113 -251081470 - L1MA8 LINE L1 -17 6274 5625 987 293 100 21 chr2 2175113 2175251 -251081332 - L1ME3A LINE L1 -1545 4625 4316 782 134 9 0 chr2 2176257 2176369 -251080214 - THE1B LTR MaLR -188 176 64 2640 107 3 0 chr2 2177211 2177574 -251079009 - THE1B LTR MaLR 0 364 1 197 286 29 14 chr2 2178475 2178545 -251078038 + MIR SINE MIR 21 91 -117 232 325 70 38 chr2 2178799 2178956 -251077627 + MIR SINE MIR 82 243 -19 324 264 8 32 chr2 2179088 2179213 -251077370 + (TATATG)n Simple_repeat Simple_repeat 4 125 0 1292 200 50 126 chr2 2179573 2179834 -251076749 + MLT2B1 LTR ERVL 1 280 -134 239 0 0 31 chr2 2179834 2179866 -251076717 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 1292 200 50 126 chr2 2179866 2179957 -251076626 + MLT2B1 LTR ERVL 280 192 -222 518 15 0 29 chr2 2179957 2180025 -251076558 + (TTTTC)n Simple_repeat Simple_repeat 2 67 0 1292 200 50 126 chr2 2180025 2180230 -251076353 + MLT2B1 LTR ERVL 191 410 -4 23 0 0 29 chr2 2180697 2180717 -251075866 + AT_rich Low_complexity Low_complexity 1 21 -12 1768 155 0 0 chr2 2180717 2181001 -251075582 - AluSg SINE Alu -26 284 1 23 0 0 29 chr2 2181001 2181014 -251075569 + AT_rich Low_complexity Low_complexity 21 33 0 207 69 0 0 chr2 2181845 2181874 -251074709 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 259 367 33 39 chr2 2182558 2182738 -251073845 - L2 LINE L2 0 3272 3094 2229 132 21 34 chr2 2184441 2184821 -251071762 + THE1C LTR MaLR 1 375 0 444 243 33 72 chr2 2184891 2184997 -251071586 - MLT1C LTR MaLR 0 467 358 2500 111 8 3 chr2 2184997 2185350 -251071233 - THE1A LTR MaLR 0 355 1 11399 106 9 5 chr2 2185350 2186924 -251069659 - THE1A-int LTR MaLR 0 1580 1 2580 94 8 3 chr2 2186926 2187277 -251069306 - THE1A LTR MaLR -2 353 1 444 243 33 72 chr2 2187277 2187318 -251069265 - MLT1C LTR MaLR -109 358 322 * 591 162 19 8 chr2 2187313 2187434 -251069149 - MLT1C LTR MaLR -252 138 16 427 213 44 46 chr2 2187608 2187747 -251068836 + L1ME3 LINE L1 6028 6162 0 202 351 57 53 chr2 2187962 2188227 -251068356 - L2 LINE L2 -1 3271 3006 483 221 0 0 chr2 2188313 2188440 -251068143 + (TG)n Simple_repeat Simple_repeat 2 128 0 204 217 67 33 chr2 2189782 2189842 -251066741 - MIR SINE MIR -78 184 123 2305 92 0 0 chr2 2191281 2191586 -251064997 - AluY SINE Alu -6 305 1 2348 113 158 0 chr2 2192850 2193281 -251063302 - LTR19A LTR ERV1 -4 482 1 224 209 75 45 chr2 2195125 2195192 -251061391 - L3 LINE CR1 -123 1454 1386 * 509 286 91 0 chr2 2195180 2195355 -251061228 + MIR SINE MIR 72 262 0 243 237 21 72 chr2 2195385 2195482 -251061101 - L3 LINE CR1 -205 1372 1281 2372 208 19 21 chr2 2195602 2196070 -251060513 - MLT2B1 LTR ERVL -2 518 52 1994 173 59 50 chr2 2196070 2196491 -251060092 - MSTB1 LTR MaLR -2 430 6 255 146 0 0 chr2 2196487 2196528 -251060055 - MLT2B1 LTR ERVL -461 59 19 * 220 312 117 85 chr2 2196533 2196969 -251059614 + L2 LINE L2 1563 2012 -1302 573 252 15 7 chr2 2197023 2197158 -251059425 - MLT1B LTR MaLR 0 390 255 587 322 150 38 chr2 2197619 2198012 -251058571 - L2 LINE L2 -444 2870 2522 1342 243 32 42 chr2 2198012 2198412 -251058171 + MSTD LTR MaLR 1 396 0 587 322 150 38 chr2 2198412 2199062 -251057521 - L2 LINE L2 -792 2522 1710 478 300 19 6 chr2 2199200 2199360 -251057223 + LTR16A LTR ERVL 105 266 -184 180 356 17 69 chr2 2200301 2200475 -251056108 + L2 LINE L2 3149 3313 0 1921 99 11 0 chr2 2201658 2201921 -251054662 - AluSx SINE Alu -5 307 42 201 243 0 0 chr2 2202092 2202129 -251054454 + MIR3 SINE MIR 120 156 -52 254 265 166 13 chr2 2203451 2203556 -251053027 - MIR SINE MIR -46 162 46 182 318 12 24 chr2 2204664 2204749 -251051834 + MIR SINE MIR 63 146 -116 214 282 130 92 chr2 2205439 2205570 -251051013 + MIR SINE MIR 53 188 -74 293 284 23 23 chr2 2206633 2206721 -251049862 + MER5A DNA MER1_type 22 109 -80 225 228 51 165 chr2 2207664 2207822 -251048761 + MIR SINE MIR 80 219 -43 201 196 0 0 chr2 2208099 2208145 -251048438 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 473 250 0 12 chr2 2208198 2208366 -251048217 + (TCCA)n Simple_repeat Simple_repeat 2 167 0 662 211 6 0 chr2 2208397 2208572 -251048011 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 610 248 8 0 chr2 2208621 2208890 -251047693 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 314 304 26 26 chr2 2208960 2209075 -251047508 + MIR3 SINE MIR 94 208 0 462 271 65 7 chr2 2209317 2209472 -251047111 - MIR SINE MIR -60 202 39 23 33 0 0 chr2 2209943 2209973 -251046610 + AT_rich Low_complexity Low_complexity 1 30 0 203 185 0 19 chr2 2210097 2210151 -251046432 + (CA)n Simple_repeat Simple_repeat 1 53 0 270 160 0 0 chr2 2210607 2210657 -251045926 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 312 75 45 chr2 2212941 2213249 -251043334 + L2 LINE L2 1891 2207 -1107 293 358 8 8 chr2 2213569 2213692 -251042891 - MIR SINE MIR -67 141 19 1257 157 138 46 chr2 2217579 2217840 -251038743 - AluJb SINE Alu -25 287 3 2566 111 6 3 chr2 2218299 2218661 -251037922 + THE1B LTR MaLR 2 364 0 229 237 37 89 chr2 2218951 2219086 -251037497 + L1ME LINE L1 5618 5745 -376 358 311 94 32 chr2 2219346 2219623 -251036960 - L1ME LINE L1 -345 5776 5483 2484 242 41 28 chr2 2219737 2220443 -251036140 - L1ME1 LINE L1 -4 6162 5448 1957 123 3 3 chr2 2221019 2221328 -251035255 - AluSx SINE Alu 0 309 1 260 327 109 25 chr2 2222455 2222657 -251033926 - L3 LINE CR1 -348 1229 1011 192 40 0 0 chr2 2223251 2223276 -251033307 + (TCTG)n Simple_repeat Simple_repeat 3 27 0 180 0 0 0 chr2 2223299 2223319 -251033264 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 216 0 0 0 chr2 2223413 2223437 -251033146 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 458 296 24 18 chr2 2224208 2224377 -251032206 + MER5A DNA MER1_type 8 177 -12 303 307 16 16 chr2 2225038 2225165 -251031418 + MER94 DNA DNA 1 127 -7 202 274 0 20 chr2 2226729 2226780 -251029803 + GA-rich Low_complexity Low_complexity 2 51 0 459 287 39 60 chr2 2228258 2228540 -251028043 - MLT1J LTR MaLR -235 276 1 188 267 50 0 chr2 2228796 2228856 -251027727 + MIR SINE MIR 53 115 -147 233 146 0 0 chr2 2229151 2229192 -251027391 - MSTB LTR MaLR 0 426 386 2097 76 8 0 chr2 2229194 2229457 -251027126 + AluSq SINE Alu 33 297 -16 321 305 195 0 chr2 2230313 2230431 -251026152 - MER5A DNA MER1_type -3 186 46 678 246 66 6 chr2 2230455 2230638 -251025945 + MER58C DNA MER1_type 21 214 -1 2344 97 3 0 chr2 2230769 2230892 -251025691 + AluSp SINE Alu 1 122 -191 577 0 27 0 chr2 2230892 2230965 -251025618 + (TAAAA)n Simple_repeat Simple_repeat 2 76 0 2344 97 3 0 chr2 2230965 2231140 -251025443 + AluSp SINE Alu 122 300 -13 271 183 29 19 chr2 2231243 2231347 -251025236 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 221 94 47 47 chr2 2231417 2231481 -251025102 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 1099 264 72 14 chr2 2231516 2231932 -251024651 - MER92C LTR ERV1 -8 546 107 289 296 173 37 chr2 2233607 2233769 -251022814 + MER5A DNA MER1_type 4 187 -2 180 274 65 48 chr2 2234471 2234533 -251022050 + MIR3 SINE MIR 107 169 -39 181 256 0 23 chr2 2234871 2234914 -251021669 + L2 LINE L2 3263 3304 -9 1429 178 71 32 chr2 2235101 2235480 -251021103 - Tigger2 DNA MER2_type 0 2718 4 2185 152 33 31 chr2 2235532 2236081 -251020502 - MLT2A2 LTR ERVL 0 554 1 249 98 0 0 chr2 2236471 2236512 -251020071 + (GCTG)n Simple_repeat Simple_repeat 4 44 0 323 319 17 9 chr2 2236575 2236691 -251019892 + MIR SINE MIR 82 198 -64 183 156 0 0 chr2 2237951 2237983 -251018600 + (ATGGTG)n Simple_repeat Simple_repeat 6 37 0 2068 116 141 0 chr2 2238163 2238533 -251018050 - MSTA LTR MaLR 0 428 7 8623 170 37 8 chr2 2238539 2240129 -251016454 - MSTA-int LTR MaLR -14 1637 1 2200 158 94 5 chr2 2240129 2240522 -251016061 - MSTA LTR MaLR 0 428 1 317 333 52 82 chr2 2240522 2240789 -251015794 - L1MEd LINE L1 -4097 2213 1955 5858 138 1 2 chr2 2240799 2241933 -251014650 + L1PA13 LINE L1 5024 6163 0 522 306 113 63 chr2 2242080 2242808 -251013775 - L1MEd LINE L1 -795 1695 928 37 62 0 0 chr2 2242808 2242873 -251013710 + AT_rich Low_complexity Low_complexity 1 65 0 1001 171 57 5 chr2 2242888 2243036 -251013547 - L1MA9 LINE L1 0 6312 6148 294 29 0 0 chr2 2243036 2243071 -251013512 + (TG)n Simple_repeat Simple_repeat 2 36 0 1001 171 57 5 chr2 2243071 2243132 -251013451 - L1MA9 LINE L1 -164 6148 6092 657 209 36 0 chr2 2243142 2243281 -251013302 - FRAM SINE Alu -32 144 1 2306 167 48 74 chr2 2243282 2243842 -251012741 - L1MA9 LINE L1 -201 6111 5567 306 301 195 16 chr2 2243847 2244093 -251012490 - L1MEd LINE L1 -5233 886 597 664 266 112 33 chr2 2245209 2245370 -251011213 - MLT1C LTR MaLR 0 467 320 1260 225 63 42 chr2 2245370 2245748 -251010835 + MLT1B LTR MaLR 5 390 0 664 266 112 33 chr2 2245748 2245991 -251010592 - MLT1C LTR MaLR -147 320 22 203 337 20 41 chr2 2246215 2246313 -251010270 + MIR3 SINE MIR 105 200 -8 193 290 32 32 chr2 2246541 2246603 -251009980 + L2 LINE L2 3232 3293 -20 641 261 78 78 chr2 2247672 2248055 -251008528 + MLT1C LTR MaLR 1 383 -84 325 336 38 0 chr2 2248316 2248447 -251008136 + MIR SINE MIR 118 253 -9 185 324 29 10 chr2 2248563 2248665 -251007918 - MIR SINE MIR -131 131 28 2247 110 10 10 chr2 2248973 2249283 -251007300 - AluSp SINE Alu -3 310 1 227 260 0 60 chr2 2249887 2249987 -251006596 + (CAGG)n Simple_repeat Simple_repeat 3 96 0 354 281 0 62 chr2 2250007 2250185 -251006398 + (CAGG)n Simple_repeat Simple_repeat 2 168 0 441 182 13 7 chr2 2251603 2251757 -251004826 + (CA)n Simple_repeat Simple_repeat 1 155 0 1052 247 115 20 chr2 2251788 2252144 -251004439 + MLT1B LTR MaLR 1 390 0 206 242 15 30 chr2 2253121 2253187 -251003396 + MIR SINE MIR 86 150 -58 197 208 0 130 chr2 2253188 2253265 -251003318 + MER5A DNA MER1_type 33 99 -90 296 333 199 20 chr2 2254721 2255124 -251001459 - L2 LINE L2 -13 3300 2826 252 258 32 11 chr2 2258303 2258396 -250998187 + C-rich Low_complexity Low_complexity 5 99 0 464 79 87 24 chr2 2258927 2259421 -250997162 + (CA)n Simple_repeat Simple_repeat 1 524 0 386 186 48 9 chr2 2259445 2259913 -250996670 + (CA)n Simple_repeat Simple_repeat 1 486 0 253 197 45 0 chr2 2259927 2259993 -250996590 + (CA)n Simple_repeat Simple_repeat 2 70 0 416 143 65 0 chr2 2260012 2260166 -250996417 + (CA)n Simple_repeat Simple_repeat 1 164 0 426 148 63 56 chr2 2260208 2260825 -250995758 + (ATGGTG)n Simple_repeat Simple_repeat 1 621 0 318 185 0 0 chr2 2262047 2262101 -250994482 - MER63 DNA MER1_type -24 1036 983 * 522 175 167 0 chr2 2262099 2262213 -250994370 - MER63 DNA MER1_type -302 760 2 240 281 89 44 chr2 2262820 2262955 -250993628 + L2 LINE L2 3132 3272 0 267 140 0 0 chr2 2263099 2263149 -250993434 + (GGGGA)n Simple_repeat Simple_repeat 2 51 0 261 0 0 0 chr2 2263398 2263427 -250993156 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr2 2264613 2264641 -250991942 + AT_rich Low_complexity Low_complexity 1 28 0 222 347 0 0 chr2 2264650 2264722 -250991861 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 697 248 72 33 chr2 2264892 2265199 -250991384 + L1MD2 LINE L1 4965 5283 -863 * 968 285 94 79 chr2 2265197 2265591 -250990992 + L1MD2 LINE L1 5560 5946 -413 2535 87 0 3 chr2 2265591 2265902 -250990681 - AluSx SINE Alu -2 310 1 968 285 94 79 chr2 2265902 2266282 -250990301 + L1MD2 LINE L1 5946 6346 -13 297 255 131 41 chr2 2268573 2268718 -250987865 - MER5B DNA MER1_type -18 160 3 263 259 108 86 chr2 2268740 2268879 -250987704 - MIR SINE MIR -112 150 9 1693 160 10 7 chr2 2269852 2270145 -250986438 + MER49 LTR ERV1 1 294 -629 6660 91 11 0 chr2 2270204 2271314 -250985269 + L1PA10 LINE L1 5046 6164 -4 1373 204 36 24 chr2 2271327 2271660 -250984923 + MER4D LTR ERV1 567 903 0 187 28 56 28 chr2 2272878 2272914 -250983669 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 281 290 133 10 chr2 2273118 2273241 -250983342 - MER5A DNA MER1_type -10 179 27 218 311 125 25 chr2 2273277 2273502 -250983081 + MIR SINE MIR 8 262 0 237 33 0 0 chr2 2273827 2273857 -250982726 + (TG)n Simple_repeat Simple_repeat 2 31 0 1737 181 0 7 chr2 2274079 2274383 -250982200 + AluJb SINE Alu 1 302 -10 230 71 0 0 chr2 2275237 2275265 -250981318 + LTR47A LTR ERVL 4 31 -421 1980 161 130 3 chr2 2275265 2275649 -250980934 + LTR47A LTR ERVL 4 436 -16 18749 168 60 13 chr2 2276957 2280737 -250975846 + L1M1 LINE L1 19 3619 -4105 1011 23 0 38 chr2 2280737 2280868 -250975715 - L1PA6 LINE L1 -7 6147 6022 18749 168 60 13 chr2 2280868 2281794 -250974789 + L1M1 LINE L1 3619 4500 -3224 2171 118 3 0 chr2 2281794 2282100 -250974483 + AluSq SINE Alu 1 307 -6 18749 168 60 13 chr2 2282100 2284047 -250972536 + L1M1 LINE L1 4500 6983 -741 445 241 19 86 chr2 2284070 2284177 -250972406 + MLT1F1 LTR MaLR 407 502 -65 2206 92 0 0 chr2 2284177 2284486 -250972097 - AluSg SINE Alu 0 309 1 445 241 19 86 chr2 2284486 2284539 -250972044 + MLT1F1 LTR MaLR 502 557 -10 353 275 84 41 chr2 2284562 2284783 -250971800 + MIR SINE MIR 20 249 -13 452 335 180 12 chr2 2285413 2285735 -250970848 + L3 LINE CR1 1114 1489 -88 297 310 90 21 chr2 2287379 2287524 -250969059 - MIR SINE MIR -52 210 56 665 256 61 22 chr2 2287557 2287737 -250968846 - MER5A DNA MER1_type -2 187 1 228 86 0 0 chr2 2288279 2288314 -250968269 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1783 195 14 24 chr2 2289152 2289522 -250967061 - MER47A DNA MER2_type 0 366 1 1492 151 3 56 chr2 2289529 2289661 -250966922 + MER2 DNA MER2_type 2 113 -232 1320 199 34 21 chr2 2289661 2289952 -250966631 - AluJb SINE Alu -17 295 1 1492 151 3 56 chr2 2289952 2290103 -250966480 + MER2 DNA MER2_type 113 270 -75 641 327 154 34 chr2 2290218 2291319 -250965264 + L2 LINE L2 1744 2977 -337 378 0 0 0 chr2 2292800 2292842 -250963741 + (CA)n Simple_repeat Simple_repeat 1 42 0 1633 213 20 20 chr2 2292843 2293190 -250963393 + MER7A DNA MER2_type 2 346 0 2429 150 33 17 chr2 2294926 2295345 -250961238 + MSTA LTR MaLR 1 426 -2 410 293 61 50 chr2 2296066 2296162 -250960421 - MIR SINE MIR -19 243 149 2266 84 3 0 chr2 2296162 2296459 -250960124 - AluSp SINE Alu -14 299 2 410 293 61 50 chr2 2296459 2296560 -250960023 - MIR SINE MIR -113 149 44 641 311 48 32 chr2 2297987 2298235 -250958348 + MIR SINE MIR 8 259 -3 391 204 23 11 chr2 2298235 2298323 -250958260 + MLT1A1 LTR MaLR 1 89 -276 269 200 9 29 chr2 2298536 2298641 -250957942 + (TG)n Simple_repeat Simple_repeat 2 104 0 344 242 7 39 chr2 2298666 2299089 -250957494 + (TG)n Simple_repeat Simple_repeat 1 409 0 311 281 149 9 chr2 2300854 2301075 -250955508 + L1ME LINE L1 5097 5348 -798 249 310 120 37 chr2 2301081 2301381 -250955202 + L1ME LINE L1 5368 5692 -429 633 316 24 14 chr2 2301437 2301649 -250954934 - L2 LINE L2 0 3313 3100 237 189 117 99 chr2 2301824 2301935 -250954648 + L1ME4a LINE L1 5973 6085 -36 18364 62 10 17 chr2 2306964 2309286 -250947297 + HERVL LTR ERVL 3105 5410 -244 1604 162 184 11 chr2 2311211 2311576 -250945007 - MSTA LTR MaLR 0 428 1 8332 157 26 51 chr2 2311576 2313195 -250943388 - MSTA-int LTR MaLR 0 1580 3 2093 139 126 23 chr2 2313197 2313585 -250942998 - MSTA LTR MaLR 0 428 1 707 261 123 22 chr2 2314114 2314527 -250942056 + MLT1C LTR MaLR 1 455 -12 392 267 18 0 chr2 2314667 2315132 -250941451 + (CA)n Simple_repeat Simple_repeat 1 473 0 233 274 171 17 chr2 2315563 2315680 -250940903 - MIR SINE MIR -5 257 123 201 312 17 0 chr2 2316424 2316517 -250940066 - MIR SINE MIR -56 152 58 401 313 72 6 chr2 2316919 2317085 -250939498 - MIR SINE MIR -33 229 53 3475 216 71 25 chr2 2317415 2318400 -250938183 + L1MC3 LINE L1 6748 7777 -8 2205 104 139 11 chr2 2318522 2318897 -250937686 + MSTA LTR MaLR 6 428 0 794 50 0 0 chr2 2320420 2320521 -250936062 + HERVL-A1 LTR ERVL 5554 5654 0 2722 106 20 40 chr2 2320522 2320974 -250935609 + MLT2A1 LTR ERVL 2 444 0 1758 135 46 0 chr2 2322085 2322367 -250934216 + AluSq SINE Alu 1 295 -18 1030 303 157 35 chr2 2323133 2323994 -250932589 - L2 LINE L2 -1627 1687 722 351 269 23 110 chr2 2324038 2324302 -250932281 - L2 LINE L2 -2764 550 310 2292 74 0 7 chr2 2325954 2326237 -250930346 - AluY SINE Alu -10 301 21 196 337 11 11 chr2 2326512 2326601 -250929982 - L3 LINE CR1 -144 1433 1345 416 298 51 28 chr2 2327143 2327321 -250929262 + MIR SINE MIR 61 242 -20 249 217 16 71 chr2 2328141 2328325 -250928258 + (CA)n Simple_repeat Simple_repeat 1 174 0 392 199 11 72 chr2 2328725 2328906 -250927677 + (CA)n Simple_repeat Simple_repeat 1 170 0 433 274 17 23 chr2 2328944 2329119 -250927464 + (CA)n Simple_repeat Simple_repeat 2 175 0 2263 121 0 3 chr2 2330754 2331060 -250925523 - AluSx SINE Alu -7 305 1 283 258 75 21 chr2 2331762 2331855 -250924728 + MIR SINE MIR 103 200 -62 260 310 34 54 chr2 2335131 2335428 -250921155 - L2 LINE L2 -78 3235 2945 2334 78 29 13 chr2 2335436 2335742 -250920841 + AluY SINE Alu 1 311 0 358 326 228 12 chr2 2335763 2336328 -250920255 - L2 LINE L2 -911 2403 1717 796 262 5 0 chr2 2336832 2337023 -250919560 + MLT1A1 LTR MaLR 172 363 -2 8427 178 30 46 chr2 2337110 2340129 -250916454 + L1MA8 LINE L1 3319 6286 -5 27 0 0 0 chr2 2340130 2340157 -250916426 + AT_rich Low_complexity Low_complexity 1 27 0 290 228 40 40 chr2 2341211 2341312 -250915271 - MER45 DNA AcHobo -898 142 42 625 169 23 31 chr2 2342133 2342197 -250914386 + MER45A DNA AcHobo 42 105 -1476 2262 115 0 3 chr2 2342197 2342493 -250914090 - AluSq SINE Alu -18 295 1 625 169 23 31 chr2 2342493 2342558 -250914025 + MER45A DNA AcHobo 105 170 -8 233 338 15 0 chr2 2342578 2342646 -250913937 + MIR3 SINE MIR 103 171 -37 287 193 102 45 chr2 2342940 2343028 -250913555 + MIR SINE MIR 108 200 -62 2647 68 0 0 chr2 2343090 2343399 -250913184 - AluY SINE Alu -1 310 2 759 333 36 45 chr2 2343497 2344303 -250912280 + L1MEc LINE L1 388 1186 -5377 3892 181 74 9 chr2 2344304 2345258 -250911325 + L1MB3 LINE L1 5165 6182 -1 423 184 34 54 chr2 2345265 2345412 -250911171 + L1MEc LINE L1 1178 1321 -5242 317 333 78 29 chr2 2345442 2345646 -250910937 + L1MEc LINE L1 1277 1490 -4894 333 283 87 46 chr2 2345929 2346148 -250910435 + L1ME LINE L1 5558 5785 -336 1715 175 0 31 chr2 2346204 2346539 -250910044 - AluJb SINE Alu 0 326 1 207 0 0 0 chr2 2347117 2347140 -250909443 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 21 82 0 0 chr2 2347807 2347856 -250908727 + AT_rich Low_complexity Low_complexity 1 49 0 2621 257 26 57 chr2 2348036 2348103 -250908480 - MER63C DNA MER1_type -138 922 854 2149 125 7 3 chr2 2348103 2348400 -250908183 - AluSq SINE Alu -15 298 1 2621 257 26 57 chr2 2348400 2349055 -250907528 - MER63C DNA MER1_type -206 854 233 710 208 19 19 chr2 2349055 2349214 -250907369 - L1MC1 LINE L1 0 6333 6175 2621 257 26 57 chr2 2349214 2349437 -250907146 - MER63C DNA MER1_type -827 233 5 294 73 0 0 chr2 2349659 2349700 -250906883 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 219 286 52 45 chr2 2349759 2349913 -250906670 + L2 LINE L2 2898 3052 -220 1698 264 146 26 chr2 2350552 2350880 -250905703 - L1ME3A LINE L1 -1 6169 5882 4277 101 28 2 chr2 2350880 2351523 -250905060 - MER4A LTR ERV1 -2 662 3 1698 264 146 26 chr2 2351523 2352047 -250904536 - L1ME3A LINE L1 -288 5882 5187 302 313 76 8 chr2 2352164 2352295 -250904288 - MIR SINE MIR -91 171 32 256 289 19 48 chr2 2352614 2352718 -250903865 - L2 LINE L2 -95 3218 3118 200 258 17 146 chr2 2352750 2352928 -250903655 - L2 LINE L2 -201 3071 2917 409 261 112 63 chr2 2352992 2353465 -250903118 + MLT1H LTR MaLR 4 540 -9 351 113 0 0 chr2 2353557 2353610 -250902973 + (T)n Simple_repeat Simple_repeat 1 53 0 205 324 0 0 chr2 2353927 2354001 -250902582 + (CCCA)n Simple_repeat Simple_repeat 2 75 0 1482 326 163 17 chr2 2354001 2355263 -250901320 + L2 LINE L2 1478 2923 -391 2647 71 0 0 chr2 2355263 2355573 -250901010 + AluY SINE Alu 1 310 -1 209 269 171 23 chr2 2356795 2356970 -250899613 + L2 LINE L2 3113 3313 0 241 267 58 12 chr2 2358296 2358382 -250898201 - MIR SINE MIR -68 140 51 267 143 0 0 chr2 2358522 2358564 -250898019 - 5S rRNA rRNA -79 42 1 410 177 13 0 chr2 2358828 2358907 -250897676 + MADE1 DNA Mariner 1 80 0 192 125 0 0 chr2 2359041 2359073 -250897510 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 231 173 0 0 chr2 2359236 2359288 -250897295 + (CA)n Simple_repeat Simple_repeat 1 52 0 227 143 41 0 chr2 2359418 2359467 -250897116 + A-rich Low_complexity Low_complexity 2 52 0 191 234 64 0 chr2 2361562 2361609 -250894974 - L2 LINE L2 -11 3302 3253 1617 182 23 28 chr2 2361658 2362010 -250894573 - L1MB2 LINE L1 0 6171 5822 355 194 0 0 chr2 2362017 2362089 -250894494 - L1MB2 LINE L1 -666 5517 5446 219 358 0 0 chr2 2362923 2363004 -250893579 + MIR SINE MIR 56 136 -72 23 0 0 0 chr2 2363760 2363783 -250892800 + AT_rich Low_complexity Low_complexity 1 23 0 267 342 43 0 chr2 2367550 2367667 -250888916 - MIR SINE MIR -108 154 33 2314 114 0 0 chr2 2367930 2368229 -250888354 - AluSg SINE Alu -11 299 1 421 208 37 34 chr2 2368428 2368750 -250887833 + (TG)n Simple_repeat Simple_repeat 1 323 0 1009 282 59 9 chr2 2368982 2369404 -250887179 - L1MB2 LINE L1 -1213 4933 4491 900 321 23 19 chr2 2369423 2369900 -250886683 - L1MB2 LINE L1 -2318 3828 3350 1049 269 117 37 chr2 2370062 2370549 -250886034 - LTR41 LTR ERVL -15 758 233 849 275 93 7 chr2 2370664 2370955 -250885628 - LTR41 LTR ERVL -457 316 1 2408 78 28 11 chr2 2371069 2371427 -250885156 - L1PA8 LINE L1 -13 6159 5796 535 311 43 20 chr2 2371711 2372211 -250884372 - L1MEd LINE L1 -4571 1739 1172 2192 117 7 0 chr2 2372208 2372517 -250884066 - AluSx SINE Alu -9 303 1 1213 219 33 91 chr2 2373382 2373432 -250883151 + MLT1A2 LTR MaLR 1 52 -322 2211 102 0 7 chr2 2373432 2373735 -250882848 - AluSq SINE Alu 0 313 13 1213 219 33 91 chr2 2373735 2374081 -250882502 + MLT1A2 LTR MaLR 52 374 0 211 286 95 29 chr2 2376453 2376558 -250880025 + MIR3 SINE MIR 49 160 -48 23 0 0 0 chr2 2376872 2376895 -250879688 + AT_rich Low_complexity Low_complexity 1 23 0 317 235 88 0 chr2 2376895 2376997 -250879586 - L1MA9 LINE L1 -22 6290 6180 1700 205 57 8 chr2 2377003 2377281 -250879302 - L1MA9 LINE L1 -235 6077 5775 225 83 0 0 chr2 2377281 2377317 -250879266 + (TG)n Simple_repeat Simple_repeat 1 36 0 1700 205 57 8 chr2 2377317 2377408 -250879175 - L1MA9 LINE L1 -537 5775 5690 312 153 53 38 chr2 2377980 2378111 -250878472 + (AGTTG)n Simple_repeat Simple_repeat 3 135 0 1201 240 53 120 chr2 2378286 2378891 -250877692 - MLT1E1 LTR MaLR 0 637 92 189 340 20 30 chr2 2379174 2379274 -250877309 - MIR SINE MIR -62 146 48 2114 122 0 10 chr2 2379543 2379847 -250876736 - AluSx SINE Alu -9 303 3 279 322 0 11 chr2 2381279 2381366 -250875217 + MIR3 SINE MIR 117 202 -6 487 157 24 0 chr2 2381394 2381477 -250875106 - L1MB5 LINE L1 -12 6162 6078 1444 136 9 5 chr2 2383315 2383535 -250873048 + AluSq SINE Alu 71 291 -22 899 248 17 8 chr2 2384019 2384253 -250872330 + MLT1D LTR MaLR 7 242 -263 473 311 54 11 chr2 2385051 2385311 -250871272 - MER90 LTR ERV1 -210 404 134 216 200 0 0 chr2 2385710 2385775 -250870808 + GA-rich Low_complexity Low_complexity 2 66 0 184 79 48 48 chr2 2387164 2387227 -250869356 + (CAA)n Simple_repeat Simple_repeat 3 65 0 292 205 26 45 chr2 2387227 2387383 -250869200 + (CACAC)n Simple_repeat Simple_repeat 1 153 0 207 62 62 31 chr2 2387419 2387484 -250869099 + (CACAA)n Simple_repeat Simple_repeat 5 71 0 224 130 48 48 chr2 2387595 2387741 -250868842 + (CACAA)n Simple_repeat Simple_repeat 2 147 0 285 255 157 24 chr2 2388653 2388890 -250867693 + MLT1J1 LTR MaLR 19 296 -154 196 298 48 48 chr2 2389394 2389498 -250867085 + L2 LINE L2 3208 3311 -2 201 313 12 0 chr2 2389899 2389979 -250866604 - MIR SINE MIR 0 262 182 197 358 0 15 chr2 2389990 2390057 -250866526 - MIR SINE MIR -181 81 16 217 300 127 36 chr2 2390887 2391107 -250865476 + L2 LINE L2 2945 3184 -129 1367 306 37 15 chr2 2391132 2391592 -250864991 - MLT1J LTR MaLR -19 492 23 2318 106 0 0 chr2 2391814 2392125 -250864458 + AluSx SINE Alu 1 311 -1 1519 197 122 22 chr2 2395817 2396177 -250860406 - MSTD LTR MaLR 0 396 1 852 108 7 40 chr2 2397414 2397562 -250859021 - FLAM_C SINE Alu 0 143 1 962 156 6 19 chr2 2397790 2397950 -250858633 + L1PA8A LINE L1 5971 6128 -3 1589 277 47 38 chr2 2398459 2399036 -250857547 + MLT1E LTR MaLR 10 591 -2 368 265 0 6 chr2 2401512 2401682 -250854901 + C-rich Low_complexity Low_complexity 4 172 0 294 138 50 12 chr2 2401685 2401765 -250854818 + CT-rich Low_complexity Low_complexity 3 85 0 2072 137 42 31 chr2 2401845 2402204 -250854379 + THE1B LTR MaLR 1 363 -1 250 242 30 0 chr2 2402568 2402634 -250853949 + L2 LINE L2 2987 3054 -218 191 244 22 0 chr2 2402700 2402745 -250853838 + L2 LINE L2 3223 3268 -4 375 289 97 50 chr2 2404742 2405123 -250851460 + HAL1 LINE L1 1 399 -2108 1057 222 31 13 chr2 2405464 2405689 -250850894 - MER101B LTR ERV1 -341 229 1 374 366 79 9 chr2 2405702 2406030 -250850553 + HAL1 LINE L1 491 841 -1666 461 205 252 0 chr2 2406774 2406891 -250849692 + MLT2D LTR ERVL 226 312 -102 198 0 0 0 chr2 2406891 2406913 -250849670 + (TC)n Simple_repeat Simple_repeat 1 22 0 461 205 252 0 chr2 2406913 2406946 -250849637 + MLT2D LTR ERVL 312 414 0 471 240 0 0 chr2 2407870 2407966 -250848617 - L1MA7 LINE L1 -186 6105 6010 629 183 41 41 chr2 2407969 2408138 -250848445 + L1MA7 LINE L1 6123 6291 0 198 209 47 0 chr2 2408758 2408801 -250847782 - MIR SINE MIR -111 151 107 249 326 38 15 chr2 2410193 2410325 -250846258 + L1ME LINE L1 5634 5768 -353 2303 102 0 6 chr2 2410562 2410876 -250845707 + AluSx SINE Alu 1 312 0 254 284 69 35 chr2 2411342 2411458 -250845125 + MIR3 SINE MIR 62 181 -27 193 231 123 15 chr2 2412774 2412839 -250843744 - MIR SINE MIR -118 144 73 216 0 0 0 chr2 2414333 2414357 -250842226 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 306 287 189 14 chr2 2414887 2415030 -250841553 - MIR SINE MIR 0 262 95 774 244 114 36 chr2 2416432 2416739 -250839844 + MLT1D LTR MaLR 47 377 -128 192 195 0 24 chr2 2417645 2417686 -250838897 + MIR SINE MIR 33 72 -136 189 107 0 0 chr2 2418193 2418221 -250838362 + (TC)n Simple_repeat Simple_repeat 2 29 0 319 355 112 0 chr2 2419705 2419874 -250836709 - MIR SINE MIR -19 243 56 364 252 37 0 chr2 2420012 2420119 -250836464 + LTR33 LTR ERVL 101 211 -310 2188 92 3 0 chr2 2421371 2421665 -250834918 - AluSx SINE Alu -17 295 1 324 358 0 15 chr2 2423086 2423220 -250833363 - MER94 DNA DNA -2 132 1 222 343 59 20 chr2 2423502 2423604 -250832979 + L2 LINE L2 2948 3053 -219 227 375 36 27 chr2 2425396 2425508 -250831075 - L2 LINE L2 -18 3254 3142 360 0 0 0 chr2 2425710 2425750 -250830833 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 0 0 0 chr2 2425749 2425775 -250830808 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 220 356 134 18 chr2 2426153 2426706 -250829877 + L2 LINE L2 2325 2941 -373 187 185 160 76 chr2 2426874 2426993 -250829590 + L2 LINE L2 3137 3265 -7 250 226 11 113 chr2 2427350 2427536 -250829047 + GA-rich Low_complexity Low_complexity 5 171 0 224 255 246 0 chr2 2428941 2429060 -250827523 - MIR SINE MIR -65 143 41 21 0 0 0 chr2 2429335 2429356 -250827227 + AT_rich Low_complexity Low_complexity 1 21 0 240 297 63 51 chr2 2430329 2430504 -250826079 - MIR SINE MIR -6 256 80 237 394 32 7 chr2 2430916 2431071 -250825512 - L2 LINE L2 -599 2715 2557 350 289 0 0 chr2 2431084 2431167 -250825416 + L2 LINE L2 3189 3271 -1 206 223 0 109 chr2 2431619 2431812 -250824771 + C-rich Low_complexity Low_complexity 5 176 0 218 230 0 102 chr2 2432014 2432210 -250824373 + C-rich Low_complexity Low_complexity 2 177 0 252 208 18 83 chr2 2432293 2432461 -250824122 + C-rich Low_complexity Low_complexity 2 158 0 741 230 73 0 chr2 2432595 2432760 -250823823 - MER5B DNA MER1_type -1 177 1 1611 235 40 6 chr2 2434630 2434983 -250821600 - MLT1A1 LTR MaLR 0 365 1 738 323 126 41 chr2 2435116 2436095 -250820488 + L2 LINE L2 206 1267 -2047 236 298 50 16 chr2 2436098 2436219 -250820364 + L2 LINE L2 1581 1705 -1609 625 197 16 0 chr2 2436366 2436493 -250820090 + L1MC2 LINE L1 6215 6343 -1 571 269 84 52 chr2 2437507 2437988 -250818595 - MLT1H1 LTR MaLR 0 555 62 1046 132 44 11 chr2 2438251 2438565 -250818018 + THE1C LTR MaLR 1 375 0 10524 126 17 14 chr2 2438565 2440140 -250816443 + THE1C-int LTR MaLR 1 1580 0 1065 127 78 11 chr2 2440140 2440444 -250816139 + THE1C LTR MaLR 1 375 0 242 292 67 0 chr2 2440490 2440579 -250816004 - LTR16A LTR ERVL -260 190 96 276 330 19 0 chr2 2440958 2441064 -250815519 - HERV16 LTR ERVL -3575 1421 1314 212 209 0 0 chr2 2442068 2442111 -250814472 - L3 LINE CR1 -124 1453 1411 318 301 66 22 chr2 2442209 2442392 -250814191 - LTR16A LTR ERVL -93 357 167 359 200 42 11 chr2 2442447 2442542 -250814041 + L1MD3 LINE L1 7898 7995 0 236 310 159 7 chr2 2443227 2443372 -250813211 + MIR SINE MIR 14 180 -82 1711 193 171 8 chr2 2443654 2444022 -250812561 + MSTA LTR MaLR 1 428 0 467 297 31 0 chr2 2445666 2445794 -250810789 + MIR3 SINE MIR 72 203 -5 943 233 43 4 chr2 2446088 2446320 -250810263 - MLT1E LTR MaLR -9 584 344 413 295 63 16 chr2 2446407 2446597 -250809986 - MLT1E LTR MaLR -394 199 1 320 300 131 31 chr2 2446678 2447098 -250809485 - L2 LINE L2 -365 2949 2488 188 228 88 35 chr2 2447485 2447542 -250809041 + L2 LINE L2 3206 3265 -7 1272 270 91 0 chr2 2450278 2450596 -250805987 + MER7A DNA MER2_type 1 345 -1 332 303 0 64 chr2 2454566 2454806 -250801777 + C-rich Low_complexity Low_complexity 1 224 0 307 77 19 0 chr2 2456406 2456458 -250800125 - AluSx SINE Alu 0 301 249 1181 135 65 0 chr2 2456458 2456643 -250799940 - AluSx SINE Alu -115 197 1 349 307 50 14 chr2 2457148 2457288 -250799295 + MIR SINE MIR 5 149 -113 2080 259 39 74 chr2 2458244 2458654 -250797929 + MER21B LTR ERV1 1 373 -490 2354 111 39 28 chr2 2458654 2459014 -250797569 - THE1B LTR MaLR 0 364 1 2080 259 39 74 chr2 2459014 2459369 -250797214 + MER21B LTR ERV1 373 739 -124 315 271 243 11 chr2 2460495 2460672 -250795911 - MIR SINE MIR 0 262 45 250 352 19 0 chr2 2463116 2463221 -250793362 + MIR SINE MIR 31 137 -71 2200 151 8 30 chr2 2463959 2464331 -250792252 - THE1B LTR MaLR 0 364 1 302 353 131 20 chr2 2464389 2464986 -250791597 + L2 LINE L2 2047 2709 -605 2297 220 59 108 chr2 2465190 2465275 -250791308 + L1MC4 LINE L1 6460 6548 -1447 2166 91 10 3 chr2 2465275 2465573 -250791010 + AluSq SINE Alu 1 300 -13 2297 220 59 108 chr2 2465573 2466794 -250789789 + L1MC4 LINE L1 6548 7757 -238 384 22 0 0 chr2 2470150 2470195 -250786388 + (TG)n Simple_repeat Simple_repeat 2 46 0 * 441 0 0 0 chr2 2470194 2470243 -250786340 + (TA)n Simple_repeat Simple_repeat 1 49 0 274 326 52 22 chr2 2470576 2470711 -250785872 - LTR16A1 LTR ERVL 0 457 319 234 0 0 0 chr2 2471163 2471189 -250785394 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 183 302 63 0 chr2 2471325 2471388 -250785195 + MIR SINE MIR 73 139 -123 4915 42 2 0 chr2 2471917 2472495 -250784088 + L1PA5 LINE L1 5576 6154 0 182 313 104 87 chr2 2472509 2472960 -250783623 - L2 LINE L2 -480 2834 2376 2157 117 0 0 chr2 2473991 2474297 -250782286 + AluSx SINE Alu 1 306 0 284 287 116 31 chr2 2474333 2474462 -250782121 + MIR SINE MIR 1 140 -122 221 363 66 0 chr2 2474952 2475043 -250781540 - MIR SINE MIR -115 147 51 280 286 55 11 chr2 2477760 2477851 -250778732 + L2 LINE L2 3162 3256 -16 1434 266 93 21 chr2 2481122 2481634 -250774949 - MER82 DNA MER2_type -6 647 99 1404 232 78 5 chr2 2481634 2481979 -250774604 + MLT2D LTR ERVL 1 378 -36 342 0 0 0 chr2 2481979 2482017 -250774566 + (CA)n Simple_repeat Simple_repeat 2 39 0 1404 232 78 5 chr2 2482017 2482055 -250774528 + MLT2D LTR ERVL 378 412 -2 417 176 0 0 chr2 2482061 2482129 -250774454 - MER82 DNA MER2_type -556 97 30 192 169 102 34 chr2 2485006 2485065 -250771518 + MIR SINE MIR 91 153 -55 347 301 18 26 chr2 2485394 2485507 -250771076 + MIR SINE MIR 21 132 -76 463 227 120 7 chr2 2485632 2485782 -250770801 + MER58B DNA MER1_type 172 338 -3 215 233 0 14 chr2 2487431 2487504 -250769079 + GA-rich Low_complexity Low_complexity 1 72 0 680 179 6 28 chr2 2487522 2487701 -250768882 + GA-rich Low_complexity Low_complexity 1 175 0 293 295 93 27 chr2 2488019 2488202 -250768381 - MLT1J1 LTR MaLR -16 430 236 337 358 18 0 chr2 2488235 2488400 -250768183 - MLT1J2 LTR MaLR -279 171 4 2573 103 22 8 chr2 2488451 2488809 -250767774 + THE1B LTR MaLR 1 363 -1 13040 119 18 6 chr2 2489160 2491208 -250765375 - Tigger1 DNA MER2_type 0 2418 346 194 291 0 0 chr2 2491868 2491923 -250764660 - L2 LINE L2 -575 2739 2685 335 228 79 59 chr2 2493851 2493952 -250762631 - L1ME4a LINE L1 -12 6109 6007 347 350 55 14 chr2 2494556 2494773 -250761810 - MIR SINE MIR -15 247 22 280 229 16 0 chr2 2495840 2495901 -250760682 + L2 LINE L2 2998 3059 -213 188 323 0 0 chr2 2496069 2496131 -250760452 + L2 LINE L2 3187 3248 -24 233 353 8 8 chr2 2496146 2496265 -250760318 + MLT1E LTR MaLR 44 162 -431 244 233 41 0 chr2 2496299 2496372 -250760211 + MLT1E LTR MaLR 431 506 -87 215 324 65 88 chr2 2496588 2496758 -250759825 + MIR SINE MIR 1 166 -96 271 298 67 0 chr2 2496764 2496868 -250759715 - L2 LINE L2 -8 3264 3154 3592 14 0 10 chr2 2498349 2498793 -250757790 - L1PA2 LINE L1 0 6155 5747 4075 8 0 0 chr2 2498793 2499269 -250757314 + L1PA2 LINE L1 5279 5754 -401 248 318 131 0 chr2 2499832 2499939 -250756644 + MIR SINE MIR 33 153 -55 268 271 10 165 chr2 2500342 2500737 -250755846 - L2 LINE L2 -80 3233 2900 204 329 0 14 chr2 2500726 2500799 -250755784 + L2 LINE L2 3242 3313 0 * 2615 62 0 0 chr2 2500802 2501110 -250755473 - AluY SINE Alu -3 308 1 309 269 168 30 chr2 2501165 2501332 -250755251 - L2 LINE L2 -493 2821 2632 264 156 0 0 chr2 2501444 2501489 -250755094 + L1PA16 LINE L1 6121 6165 -1 5686 250 58 45 chr2 2501785 2502260 -250754323 + L1MB1 LINE L1 1182 1649 -4755 19332 45 0 1 chr2 2502260 2505411 -250751172 - L1PA5 LINE L1 -4 6150 3001 5686 250 58 45 chr2 2505411 2505552 -250751031 + L1MB1 LINE L1 1649 1787 -4617 180 0 0 0 chr2 2505552 2505572 -250751011 + (CA)n Simple_repeat Simple_repeat 1 20 0 5686 250 58 45 chr2 2505572 2507549 -250749034 + L1MB1 LINE L1 1787 3736 -2668 664 122 0 0 chr2 2507549 2507639 -250748944 + AluJ/FLAM SINE Alu 13 102 -210 676 200 0 16 chr2 2507646 2507771 -250748812 + FRAM SINE Alu 53 175 -1 5686 250 58 45 chr2 2507771 2510274 -250746309 + L1MB1 LINE L1 3741 6402 -2 3671 201 57 103 chr2 2510297 2511076 -250745507 - MLT1B-int LTR MaLR -125 1246 551 2722 123 0 5 chr2 2511076 2511484 -250745099 - L1PA13 LINE L1 0 6163 5758 3671 201 57 103 chr2 2511484 2512011 -250744572 - MLT1B-int LTR MaLR -820 551 1 1596 188 48 10 chr2 2512011 2512383 -250744200 - MLT1B LTR MaLR 0 467 1 509 239 5 0 chr2 2512397 2512620 -250743963 + (TG)n Simple_repeat Simple_repeat 1 224 0 190 366 46 7 chr2 2512647 2512800 -250743783 - L2 LINE L2 -1364 1950 1792 252 243 14 0 chr2 2513432 2513506 -250743077 + HAL1 LINE L1 2322 2396 -111 208 254 42 14 chr2 2514935 2515006 -250741577 + L3 LINE CR1 1349 1421 -156 214 356 57 26 chr2 2515420 2515614 -250740969 + L3 LINE CR1 1244 1443 -134 311 282 36 45 chr2 2516066 2516176 -250740407 + MIR SINE MIR 38 146 -62 425 315 56 28 chr2 2516745 2516923 -250739660 - MIR SINE MIR -6 256 74 780 271 199 14 chr2 2517031 2517448 -250739135 + MLT1D LTR MaLR 2 495 -10 295 302 232 23 chr2 2517508 2517978 -250738605 + L2 LINE L2 2172 2739 -575 743 203 96 12 chr2 2518334 2518642 -250737941 + MSTD LTR MaLR 6 395 -1 294 293 95 26 chr2 2518645 2518761 -250737822 + L2 LINE L2 3188 3311 -2 337 356 10 0 chr2 2518788 2518892 -250737691 - MIR SINE MIR -99 163 59 701 329 109 22 chr2 2519568 2520064 -250736519 - MLT1G LTR MaLR 0 590 52 1905 181 35 46 chr2 2520126 2520557 -250736026 - MSTC LTR MaLR 0 428 3 1373 197 30 10 chr2 2520583 2520878 -250735705 - MLT1B LTR MaLR -19 371 71 210 184 20 0 chr2 2524251 2524300 -250732283 + (CA)n Simple_repeat Simple_repeat 1 50 0 189 365 90 23 chr2 2526059 2526325 -250730258 - L2 LINE L2 -788 2526 2243 294 95 0 0 chr2 2526408 2526450 -250730133 + (GA)n Simple_repeat Simple_repeat 1 42 0 429 54 0 0 chr2 2526734 2526790 -250729793 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 266 316 0 0 chr2 2527046 2527125 -250729458 + (CA)n Simple_repeat Simple_repeat 2 80 0 659 209 47 29 chr2 2528991 2529163 -250727420 + MLT1A1 LTR MaLR 1 175 -190 2403 239 38 63 chr2 2529177 2530125 -250726458 + MLT1A1-int LTR MaLR 124 1118 -617 1237 212 141 96 chr2 2530118 2530566 -250726017 + MLT1A1-int LTR MaLR 1268 1735 0 * 823 231 5 39 chr2 2530566 2530769 -250725814 + MLT1A1 LTR MaLR 1 196 -169 964 221 20 0 chr2 2530787 2530986 -250725597 + MLT1A1 LTR MaLR 161 363 -2 1880 121 82 25 chr2 2532265 2532620 -250723963 - THE1C LTR MaLR 0 375 1 420 72 40 59 chr2 2535020 2535172 -250721411 + (CA)n Simple_repeat Simple_repeat 2 150 0 201 184 48 39 chr2 2535175 2535278 -250721305 + (CACAC)n Simple_repeat Simple_repeat 4 107 0 268 103 52 31 chr2 2535281 2535378 -250721205 + (CA)n Simple_repeat Simple_repeat 1 99 0 207 213 0 21 chr2 2535588 2535635 -250720948 + CT-rich Low_complexity Low_complexity 1 46 0 412 198 16 59 chr2 2535786 2536060 -250720523 + GA-rich Low_complexity Low_complexity 1 262 0 200 237 68 0 chr2 2536384 2536443 -250720140 + CT-rich Low_complexity Low_complexity 4 66 0 238 253 0 111 chr2 2536531 2536630 -250719953 + MER94 DNA DNA 30 117 -17 193 354 21 10 chr2 2538320 2538416 -250718167 + L2 LINE L2 2666 2762 -552 933 257 41 55 chr2 2538653 2539019 -250717564 + MLT1B LTR MaLR 5 365 -25 577 205 22 6 chr2 2539291 2539822 -250716761 + (CA)n Simple_repeat Simple_repeat 1 539 0 254 159 0 79 chr2 2539822 2539885 -250716698 - MER4-int LTR ERV1 -5432 1166 1109 268 176 29 0 chr2 2539895 2539963 -250716620 + (CA)n Simple_repeat Simple_repeat 2 71 0 301 298 33 58 chr2 2539963 2540084 -250716499 - L1MC4 LINE L1 -1337 6705 6588 359 260 18 11 chr2 2540119 2540405 -250716178 + (CA)n Simple_repeat Simple_repeat 1 288 0 271 195 183 0 chr2 2542170 2542252 -250714331 + MIR SINE MIR 61 157 -105 528 366 32 35 chr2 2542468 2542930 -250713653 + L2 LINE L2 2156 2616 -698 22 0 0 0 chr2 2543091 2543113 -250713470 + AT_rich Low_complexity Low_complexity 1 22 0 531 0 0 0 chr2 2543621 2543680 -250712903 + (TA)n Simple_repeat Simple_repeat 1 59 0 270 88 35 53 chr2 2543680 2543737 -250712846 + LTR33A LTR ERVL 450 505 -18 23 0 0 0 chr2 2544355 2544378 -250712205 + AT_rich Low_complexity Low_complexity 1 23 0 463 335 11 47 chr2 2545017 2545208 -250711375 + L1ME4a LINE L1 5731 5914 -207 270 300 47 0 chr2 2545218 2545368 -250711215 + L1ME4a LINE L1 5956 6112 -9 572 306 40 76 chr2 2545726 2546147 -250710436 + L2 LINE L2 2127 2532 -782 184 333 0 0 chr2 2546248 2546302 -250710281 - MIR SINE MIR -128 134 81 275 303 11 22 chr2 2547582 2547760 -250708823 + (TGAG)n Simple_repeat Simple_repeat 4 179 0 388 223 54 18 chr2 2550548 2550660 -250705923 - MIR3 SINE MIR 0 208 93 413 286 104 16 chr2 2550830 2551022 -250705561 - MIR SINE MIR -48 214 6 3795 122 23 28 chr2 2551210 2551810 -250704773 + MER4A LTR ERV1 1 597 -3 251 179 45 143 chr2 2552991 2553103 -250703480 - MLT1L LTR MaLR -220 395 295 520 238 41 8 chr2 2555343 2555465 -250701118 - MIR SINE MIR -70 192 67 326 262 0 36 chr2 2555542 2555626 -250700957 - MIR SINE MIR -29 233 153 1152 269 97 3 chr2 2555699 2556121 -250700462 + L1ME1 LINE L1 5717 6334 0 273 375 26 7 chr2 2557066 2557218 -250699365 - MIR SINE MIR -50 212 58 186 247 129 54 chr2 2557230 2557323 -250699260 - MIR SINE MIR -3 259 160 282 242 60 100 chr2 2557328 2557621 -250698962 + MLT1I LTR MaLR 1 269 -140 266 279 0 0 chr2 2558358 2558419 -250698164 + L2 LINE L2 3208 3268 -4 277 293 105 11 chr2 2559042 2559223 -250697360 + MLT1J1 LTR MaLR 1 198 -248 296 260 115 29 chr2 2559263 2559367 -250697216 + MLT1J2 LTR MaLR 291 403 -47 499 261 210 5 chr2 2559393 2559820 -250696763 + L2 LINE L2 2696 3217 -96 555 173 0 0 chr2 2559829 2559997 -250696586 + (TG)n Simple_repeat Simple_repeat 2 169 0 398 266 0 0 chr2 2559997 2560091 -250696492 + L2 LINE L2 3218 3311 -2 288 137 0 0 chr2 2560871 2560922 -250695661 + (T)n Simple_repeat Simple_repeat 1 51 0 274 239 28 0 chr2 2562272 2562343 -250694240 - L1MA6 LINE L1 -167 6133 6061 2779 194 224 67 chr2 2564763 2565643 -250690940 - LTR28 LTR ERV1 -2 1018 1 199 261 92 0 chr2 2566166 2566231 -250690352 - L2 LINE L2 -10 3303 3233 273 152 0 0 chr2 2568405 2568451 -250688132 + U6 snRNA snRNA 62 107 0 2054 123 3 0 chr2 2568632 2568925 -250687658 - AluSp SINE Alu -19 294 1 371 304 43 46 chr2 2569207 2569552 -250687031 - L1ME LINE L1 -561 5601 5258 588 370 61 26 chr2 2569574 2570134 -250686449 - L1ME LINE L1 -922 5224 4640 1660 169 21 17 chr2 2570135 2570432 -250686151 - AluJo SINE Alu -26 286 1 1171 151 47 0 chr2 2570445 2570657 -250685926 - L1M2 LINE L1 -647 5644 5423 860 211 0 0 chr2 2570652 2570818 -250685765 + L1M2 LINE L1 5628 5793 -507 * 437 187 0 37 chr2 2570818 2571005 -250685578 + (TA)n Simple_repeat Simple_repeat 1 180 0 568 161 4 35 chr2 2571016 2571278 -250685305 + (TA)n Simple_repeat Simple_repeat 1 253 0 317 309 73 20 chr2 2571307 2571553 -250685030 + L1MC3 LINE L1 5750 6008 -1777 * 2385 128 39 25 chr2 2571339 2571770 -250684813 + L1MA8 LINE L1 5782 6218 -73 300 286 86 37 chr2 2571781 2572026 -250684557 - L1ME LINE L1 -1503 4643 4387 1625 180 32 18 chr2 2572085 2572392 -250684191 + AluSx SINE Alu 1 311 0 477 311 70 31 chr2 2572403 2572544 -250684039 + MIR SINE MIR 1 156 -106 1818 189 36 3 chr2 2572544 2572877 -250683706 - MER7A DNA MER2_type -1 345 4 477 311 70 31 chr2 2572877 2572963 -250683620 + MIR SINE MIR 156 237 -25 1712 236 17 48 chr2 2573658 2574140 -250682443 - MLT1C LTR MaLR 0 467 1 299 352 34 11 chr2 2574368 2574544 -250682039 - MIR SINE MIR -36 226 47 309 303 32 50 chr2 2577223 2577444 -250679139 - L2 LINE L2 -15 3298 3082 254 332 114 15 chr2 2577608 2577942 -250678641 - L2 LINE L2 -559 2755 2389 2546 163 19 26 chr2 2578211 2578565 -250678018 - MSTB LTR MaLR 0 426 74 2381 98 0 0 chr2 2578565 2578870 -250677713 - AluSg SINE Alu -5 305 1 2546 163 19 26 chr2 2578870 2578944 -250677639 - MSTB LTR MaLR -352 74 1 199 373 20 51 chr2 2579233 2579488 -250677095 + L2 LINE L2 2601 2847 -467 849 207 78 132 chr2 2580628 2580868 -250675715 - MLT1A1 LTR MaLR 0 365 113 1960 81 16 0 chr2 2580868 2581116 -250675467 + AluSp SINE Alu 44 295 -18 849 207 78 132 chr2 2581116 2581177 -250675406 - MLT1A1 LTR MaLR -252 113 87 2134 119 10 3 chr2 2581177 2581479 -250675104 - AluSg SINE Alu -6 304 1 849 207 78 132 chr2 2581479 2581562 -250675021 - MLT1A1 LTR MaLR -278 87 1 1561 273 127 25 chr2 2581751 2582443 -250674140 - L1MC4 LINE L1 -87 7955 7193 241 338 50 12 chr2 2582539 2582699 -250673884 - MIR SINE MIR -12 250 85 2270 155 22 28 chr2 2582701 2583158 -250673425 - MSTB2 LTR MaLR -3 454 1 32 0 0 0 chr2 2583792 2583824 -250672759 + AT_rich Low_complexity Low_complexity 1 32 0 2232 120 10 0 chr2 2584188 2584487 -250672096 + AluSx SINE Alu 1 302 -10 186 222 0 0 chr2 2585287 2585341 -250671242 + A-rich Low_complexity Low_complexity 1 54 0 1172 220 97 61 chr2 2585370 2585815 -250670768 + MER101 LTR ERV1 5 465 -9 316 280 33 40 chr2 2585839 2585989 -250670594 + L1ME LINE L1 2926 3074 -3072 415 269 17 29 chr2 2586329 2586504 -250670079 + L1ME LINE L1 5574 5746 -375 3880 164 28 17 chr2 2586527 2587241 -250669342 + MER72 LTR ERV1 1 722 0 219 323 91 0 chr2 2587738 2587837 -250668746 - MIR SINE MIR -63 145 38 283 261 72 36 chr2 2589720 2589831 -250666752 + L2 LINE L2 3125 3239 -33 193 196 22 0 chr2 2590113 2590159 -250666424 + L2 LINE L2 3262 3308 -5 217 273 30 0 chr2 2590271 2590337 -250666246 + MIR SINE MIR 86 153 -109 293 265 15 0 chr2 2590421 2590489 -250666094 - L2 LINE L2 0 3313 3245 495 329 111 19 chr2 2590731 2591047 -250665536 - L2 LINE L2 -18 3254 2910 187 344 66 33 chr2 2592198 2592307 -250664276 + MIR SINE MIR 93 210 -52 2329 81 13 3 chr2 2592307 2592617 -250663966 + AluSq SINE Alu 1 313 0 187 344 66 33 chr2 2592617 2592658 -250663925 + MIR SINE MIR 210 248 -14 397 186 0 72 chr2 2593277 2593470 -250663113 + C-rich Low_complexity Low_complexity 2 180 0 467 272 35 0 chr2 2593487 2593660 -250662923 + C-rich Low_complexity Low_complexity 2 180 0 365 314 0 0 chr2 2593673 2593848 -250662735 + (CACCC)n Simple_repeat Simple_repeat 4 178 0 2156 113 0 0 chr2 2595277 2595559 -250661024 + AluSx SINE Alu 3 284 -28 754 240 134 55 chr2 2597270 2597636 -250658947 - MSTD LTR MaLR -1 395 1 278 304 21 29 chr2 2597669 2597821 -250658762 - MIR SINE MIR -67 141 3 2127 89 0 4 chr2 2598117 2598388 -250658195 + AluSc SINE Alu 25 294 -15 528 105 26 0 chr2 2599208 2599326 -250657257 + AluSg/x SINE Alu 201 320 0 27 29 0 0 chr2 2599999 2600033 -250656550 + AT_rich Low_complexity Low_complexity 1 34 0 248 285 36 67 chr2 2601376 2601541 -250655042 - L2 LINE L2 -1 3312 3153 312 339 23 8 chr2 2601644 2601774 -250654809 + L2 LINE L2 3137 3268 -4 4494 187 55 23 chr2 2601778 2602751 -250653832 - L1MA9 LINE L1 -38 6274 5270 2118 217 70 2 chr2 2602750 2603248 -250653335 + L1MA9 LINE L1 4728 5259 -887 * 2126 144 0 3 chr2 2603911 2604216 -250652367 - AluJb SINE Alu -6 306 3 485 224 63 29 chr2 2607088 2607262 -250649321 - MER104 DNA MER2_type 0 180 1 361 252 112 65 chr2 2608376 2608654 -250647929 + L1MC5 LINE L1 7626 7916 -45 2526 72 0 0 chr2 2609219 2609526 -250647057 + AluY SINE Alu 1 307 -4 333 265 8 98 chr2 2609542 2609674 -250646909 + L1ME4a LINE L1 5580 5699 -422 386 218 0 0 chr2 2609711 2609789 -250646794 + L1ME4a LINE L1 5784 5861 -260 2167 128 0 3 chr2 2609888 2610185 -250646398 + AluSg SINE Alu 3 298 -12 4629 208 49 36 chr2 2610270 2611968 -250644615 - L1MC2 LINE L1 -8 6754 5038 1789 174 0 10 chr2 2611968 2612261 -250644322 + AluJo SINE Alu 10 299 -13 4629 208 49 36 chr2 2612261 2612413 -250644170 - L1MC2 LINE L1 -1724 5038 4890 4965 229 70 87 chr2 2612426 2612489 -250644094 - L1MC2 LINE L1 -2113 4451 4388 2068 164 44 29 chr2 2612489 2612873 -250643710 + MLT1B LTR MaLR 1 390 0 4965 229 70 87 chr2 2612873 2613521 -250643062 - L1MC2 LINE L1 -2176 4388 3731 216 0 0 0 chr2 2613521 2613545 -250643038 + (TC)n Simple_repeat Simple_repeat 2 25 0 4965 229 70 87 chr2 2613545 2613650 -250642933 - L1MC2 LINE L1 -2833 3731 3626 721 284 0 0 chr2 2613650 2613819 -250642764 + MER6B DNA MER2_type 2 170 -40 4965 229 70 87 chr2 2613819 2615523 -250641060 - L1MC2 LINE L1 -2938 3626 1787 2892 194 29 23 chr2 2615526 2615677 -250640906 - L1MC2 LINE L1 -4852 1193 1044 2595 115 3 13 chr2 2615677 2616052 -250640531 + THE1C LTR MaLR 1 371 -4 2892 194 29 23 chr2 2616052 2616922 -250639661 - L1MC2 LINE L1 -5001 1044 517 193 138 52 52 chr2 2617626 2617684 -250638899 - MIR SINE MIR -65 143 86 348 174 101 18 chr2 2618211 2618320 -250638263 - ORSL DNA AcHobo -91 184 67 297 274 0 0 chr2 2619497 2619592 -250636991 + (TG)n Simple_repeat Simple_repeat 2 96 0 26 30 0 0 chr2 2619838 2619871 -250636712 + AT_rich Low_complexity Low_complexity 1 33 0 231 114 0 0 chr2 2619958 2619993 -250636590 + (A)n Simple_repeat Simple_repeat 1 35 0 2105 143 55 62 chr2 2621574 2622007 -250634576 - Tigger2a DNA MER2_type -4 430 1 180 315 54 9 chr2 2622088 2622199 -250634384 - MIR3 SINE MIR -31 177 62 2191 132 0 0 chr2 2624451 2624740 -250631843 - AluSx SINE Alu -23 289 1 316 275 148 0 chr2 2626547 2626689 -250629894 + MER45C DNA AcHobo 1 163 -790 330 281 43 49 chr2 2626865 2627050 -250629533 + MER45C DNA AcHobo 461 644 -309 1308 234 38 0 chr2 2627399 2627715 -250628868 + MER45B DNA AcHobo 713 1040 0 956 264 126 42 chr2 2629582 2630036 -250626547 + HAL1 LINE L1 597 1088 -1419 2182 127 0 0 chr2 2630036 2630335 -250626248 + AluSx SINE Alu 1 299 -13 505 298 104 31 chr2 2630347 2630703 -250625880 + L1MCc LINE L1 24 405 -6018 1725 258 131 47 chr2 2630857 2631556 -250625027 + L1MCc LINE L1 807 1446 -5495 1732 167 17 10 chr2 2631556 2631844 -250624739 + AluJb SINE Alu 7 296 -16 1725 258 131 47 chr2 2631844 2632888 -250623695 + L1MCc LINE L1 1446 2720 -4221 266 71 0 24 chr2 2632888 2632930 -250623653 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1725 258 131 47 chr2 2632930 2632964 -250623619 + L1MCc LINE L1 2720 2750 -4191 488 221 25 16 chr2 2632989 2633111 -250623472 + L1ME3A LINE L1 29 151 -6245 305 291 112 50 chr2 2633128 2633482 -250623101 + MLT1J1 LTR MaLR 6 343 -103 491 155 78 6 chr2 2634091 2634420 -250622163 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 208 264 57 75 chr2 2634434 2634556 -250622027 + MIR SINE MIR 2 121 -87 185 290 210 0 chr2 2635024 2635124 -250621459 - L2 LINE L2 -2 3270 3150 254 58 0 135 chr2 2637110 2637162 -250619421 - L2 LINE L2 -5 3267 3223 26 0 0 0 chr2 2638371 2638397 -250618186 + AT_rich Low_complexity Low_complexity 1 26 0 396 59 0 0 chr2 2639056 2639107 -250617476 + (CA)n Simple_repeat Simple_repeat 2 52 0 282 123 0 0 chr2 2639221 2639278 -250617305 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 188 319 72 0 chr2 2639333 2639402 -250617181 - MIR SINE MIR -61 147 74 2455 255 98 55 chr2 2640579 2640776 -250615807 + L1ME3A LINE L1 1230 1417 -4824 985 295 144 17 chr2 2640776 2641352 -250615231 - MLT1E1 LTR MaLR -1 653 5 2455 255 98 55 chr2 2641352 2643932 -250612651 + L1ME3A LINE L1 1417 4295 -1946 1813 151 141 26 chr2 2643932 2644316 -250612267 - MSTA LTR MaLR 0 428 1 2455 255 98 55 chr2 2644316 2646341 -250610242 + L1ME3A LINE L1 4295 6232 -9 1164 170 58 145 chr2 2646423 2646823 -250609760 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr2 2648951 2648972 -250607611 + AT_rich Low_complexity Low_complexity 1 21 0 2283 103 3 0 chr2 2648975 2649267 -250607316 + AluSq SINE Alu 1 293 -20 5117 121 56 39 chr2 2650413 2652054 -250604529 + L1PA16 LINE L1 4495 6166 0 310 292 46 8 chr2 2652109 2652239 -250604344 + MIR3 SINE MIR 74 208 0 40 37 0 0 chr2 2652244 2652298 -250604285 + AT_rich Low_complexity Low_complexity 1 54 0 561 249 60 2 chr2 2652575 2652764 -250603819 - MIR SINE MIR -50 212 15 195 372 78 35 chr2 2654121 2654492 -250602091 - L2 LINE L2 -603 2711 2325 1043 177 36 64 chr2 2654538 2654758 -250601825 + AluJo SINE Alu 68 281 -31 4222 145 21 39 chr2 2654762 2654889 -250601694 + L1MA7 LINE L1 5484 5612 -679 2130 122 0 44 chr2 2654889 2655208 -250601375 + AluSx SINE Alu 5 309 -3 4222 145 21 39 chr2 2655208 2655903 -250600680 + L1MA7 LINE L1 5612 6291 0 392 88 81 0 chr2 2656052 2656132 -250600451 - L1MB1 LINE L1 -1 6167 6098 5309 79 11 4 chr2 2656165 2656524 -250600059 - L1PB1 LINE L1 -2 6149 5794 414 0 0 0 chr2 2656524 2656570 -250600013 + (TG)n Simple_repeat Simple_repeat 2 47 0 5309 79 11 4 chr2 2656570 2656931 -250599652 - L1PB1 LINE L1 -357 5794 5424 307 327 35 7 chr2 2657070 2657280 -250599303 + MIR SINE MIR 5 218 -44 1162 220 112 67 chr2 2657284 2657739 -250598844 - MLT1H LTR MaLR -1 548 22 358 300 91 28 chr2 2658376 2658629 -250597954 + MLT1J LTR MaLR 236 504 -7 495 213 148 41 chr2 2659247 2659491 -250597092 + HAL1b LINE L1 726 995 -353 261 182 18 0 chr2 2659672 2659727 -250596856 - MLT2B1 LTR ERVL 0 520 465 183 80 0 0 chr2 2659731 2659756 -250596827 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 898 214 147 136 chr2 2659810 2660170 -250596413 - MLT2B1 LTR ERVL -50 364 1 2340 99 0 3 chr2 2663208 2663502 -250593081 - AluSx SINE Alu -19 293 1 258 173 0 0 chr2 2663533 2663585 -250592998 - L1MB8 LINE L1 -14 6164 6113 * 5933 193 25 12 chr2 2663582 2665324 -250591259 + L1M2 LINE L1 4027 5787 -525 12666 175 51 24 chr2 2665325 2667801 -250588782 + L1P2 LINE L1 2251 4660 -1494 343 67 0 0 chr2 2667801 2667846 -250588737 + MADE1 DNA Mariner 1 45 -35 12666 175 51 24 chr2 2667846 2668121 -250588462 + L1P2 LINE L1 4660 4926 -1228 3403 46 0 5 chr2 2668121 2668538 -250588045 - L1PA5 LINE L1 -2 6152 5738 12666 175 51 24 chr2 2668538 2669132 -250587451 + L1PA5 LINE L1 4926 5733 -421 3230 147 28 9 chr2 2669110 2669887 -250586696 + L1PB4 LINE L1 4988 5775 -381 * 297 0 0 0 chr2 2669887 2669920 -250586663 + (TA)n Simple_repeat Simple_repeat 2 34 0 1392 158 41 142 chr2 2670234 2670330 -250586253 + L1PB4 LINE L1 5782 5886 -270 326 89 0 0 chr2 2670330 2670375 -250586208 + MADE1 DNA Mariner 35 79 -1 1392 158 41 142 chr2 2670375 2670651 -250585932 + L1PB4 LINE L1 5886 6156 0 2813 152 16 4 chr2 2670693 2671550 -250585033 + L1P4 LINE L1 4828 5692 -473 1729 175 10 0 chr2 2671553 2671845 -250584738 + AluJb SINE Alu 1 295 -17 210 267 0 0 chr2 2672335 2672380 -250584203 + (TATG)n Simple_repeat Simple_repeat 1 45 0 345 253 114 98 chr2 2673408 2673468 -250583115 + L1MEc LINE L1 1689 1747 -4974 2484 59 3 7 chr2 2673468 2673772 -250582811 + AluY SINE Alu 1 303 -8 345 253 114 98 chr2 2673772 2674098 -250582485 + L1MEc LINE L1 1747 2081 -4640 2052 200 42 9 chr2 2674133 2674563 -250582020 + LTR56 LTR ERV1 1 444 -1 385 307 111 42 chr2 2674810 2675200 -250581383 + L1MEc LINE L1 2345 2804 -3917 51 65 0 0 chr2 2675911 2676004 -250580579 + AT_rich Low_complexity Low_complexity 1 93 0 21 57 0 0 chr2 2676253 2676288 -250580295 + AT_rich Low_complexity Low_complexity 1 35 0 251 280 40 0 chr2 2676380 2676455 -250580128 + Tigger6 DNA MER2_type 1 78 -1519 264 242 0 77 chr2 2678146 2678237 -250578346 - L1MC4 LINE L1 -1341 6701 6618 1166 128 6 17 chr2 2678260 2678440 -250578143 + AluSg/x SINE Alu 135 312 0 2330 86 0 10 chr2 2678753 2679055 -250577528 - AluY SINE Alu -12 299 1 42 65 0 0 chr2 2679238 2679315 -250577268 + AT_rich Low_complexity Low_complexity 1 77 0 185 164 0 36 chr2 2680138 2680193 -250576390 + (TTA)n Simple_repeat Simple_repeat 2 54 0 200 264 83 0 chr2 2680850 2680922 -250575661 + MIR SINE MIR 127 204 -58 2208 141 141 5 chr2 2681007 2681383 -250575200 - MSTA LTR MaLR 0 428 2 1530 274 86 89 chr2 2681437 2683119 -250573464 - HAL1 LINE L1 0 2507 830 309 169 0 0 chr2 2683130 2683189 -250573394 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1955 184 46 90 chr2 2683189 2683689 -250572894 + MLT2B1 LTR ERVL 2 479 -41 218 202 40 40 chr2 2683689 2683786 -250572797 + (TA)n Simple_repeat Simple_repeat 2 101 -24 1326 168 26 17 chr2 2683786 2684018 -250572565 - MER46A DNA MER2_type 0 236 3 218 202 40 40 chr2 2684018 2684044 -250572539 + (TA)n Simple_repeat Simple_repeat 100 125 0 1401 59 0 0 chr2 2684097 2684267 -250572316 + LTR9 LTR ERV1 3 172 -440 340 229 0 62 chr2 2684269 2684365 -250572218 + L1MC4 LINE L1 6614 6703 -1339 469 184 0 15 chr2 2684370 2684506 -250572077 + (TA)n Simple_repeat Simple_repeat 2 135 0 247 269 0 21 chr2 2684507 2684600 -250571983 + L1MC4 LINE L1 6613 6703 -1339 345 198 0 0 chr2 2684602 2684688 -250571895 + (TA)n Simple_repeat Simple_repeat 2 87 0 241 194 45 0 chr2 2684691 2684758 -250571825 + L1MCa LINE L1 1994 2063 -4363 233 238 71 12 chr2 2684785 2684869 -250571714 - L1MC4 LINE L1 -1333 6709 6621 217 214 0 0 chr2 2684880 2684956 -250571627 + (TG)n Simple_repeat Simple_repeat 1 76 0 260 61 0 0 chr2 2684966 2684999 -250571584 + MLT2C1 LTR ERVL 360 392 -5 224 167 21 0 chr2 2685008 2685056 -250571527 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3762 149 28 12 chr2 2685177 2685779 -250570804 - LTR9 LTR ERV1 0 612 1 244 273 79 43 chr2 2686202 2686341 -250570242 - HAL1 LINE L1 -2363 144 1 2060 121 0 23 chr2 2686716 2687022 -250569561 - AluSx SINE Alu -13 299 1 244 294 98 21 chr2 2688018 2688161 -250568422 - MER103 DNA DNA -2 164 11 207 333 23 0 chr2 2688390 2688477 -250568106 + CT-rich Low_complexity Low_complexity 2 90 0 2032 123 13 13 chr2 2688628 2688938 -250567645 + L1PA13 LINE L1 5546 5855 -308 1328 229 14 8 chr2 2688926 2689297 -250567286 + L1MCa LINE L1 3104 3476 -2950 * 5182 133 3 1 chr2 2689296 2690701 -250565882 + L1PA12 LINE L1 4577 5984 -184 2095 170 25 0 chr2 2690701 2691065 -250565518 - L1M4 LINE L1 -483 5701 5329 1435 73 28 0 chr2 2691071 2691249 -250565334 + L1PA12 LINE L1 5985 6167 -1 2836 92 20 52 chr2 2691315 2691759 -250564824 - L1PB1 LINE L1 -3 6148 5719 3849 197 33 19 chr2 2691870 2692883 -250563700 + L1MB7 LINE L1 5102 6126 -58 1176 247 42 3 chr2 2692897 2693209 -250563374 - L1MA9 LINE L1 -38 6274 5951 2786 175 7 2 chr2 2693217 2693663 -250562920 - L1PA16 LINE L1 -4 6162 5715 616 259 114 71 chr2 2693862 2694484 -250562099 + L1M4 LINE L1 3681 4329 -1817 422 257 84 48 chr2 2694537 2694786 -250561797 + L1MC4 LINE L1 6914 7171 -871 1134 237 3 61 chr2 2694797 2695109 -250561474 + L1MA5 LINE L1 1 294 -6915 306 325 9 0 chr2 2696056 2696170 -250560413 - MER94 DNA DNA -19 115 1 233 271 76 34 chr2 2696509 2696627 -250559956 + MIR SINE MIR 106 228 -34 335 193 0 0 chr2 2697679 2697736 -250558847 - L2 LINE L2 -9 3304 3248 414 296 0 7 chr2 2698121 2698424 -250558159 + (CA)n Simple_repeat Simple_repeat 1 300 0 437 328 0 11 chr2 2698437 2698614 -250557969 + (CA)n Simple_repeat Simple_repeat 1 175 0 10308 204 34 60 chr2 2699445 2700895 -250555688 + L1MA5 LINE L1 390 1877 -5485 2179 123 6 25 chr2 2700895 2701213 -250555370 - AluSx SINE Alu 0 312 1 10308 204 34 60 chr2 2701213 2704958 -250551625 + L1MA5 LINE L1 1877 5720 -1642 481 50 0 200 chr2 2704958 2705058 -250551525 - MADE1 DNA Mariner 0 80 1 10308 204 34 60 chr2 2705058 2706017 -250550566 + L1MA5 LINE L1 5720 7113 -249 286 51 26 0 chr2 2706017 2706056 -250550527 + MADE1 DNA Mariner 1 40 -40 10308 204 34 60 chr2 2706056 2706152 -250550431 + L1MA5 LINE L1 7113 7210 -152 4971 62 8 8 chr2 2706154 2706765 -250549818 - L1PA7 LINE L1 -1 6153 5543 967 172 0 0 chr2 2706765 2706933 -250549650 + L1MA5 LINE L1 7194 7362 0 721 412 71 10 chr2 2706934 2707444 -250549139 + L1MC4a LINE L1 7116 7607 -201 272 303 107 8 chr2 2707625 2707747 -250548836 - MIR SINE MIR -37 225 92 562 211 45 39 chr2 2708007 2708163 -250548420 + MLT1D LTR MaLR 14 170 -335 1036 153 178 4 chr2 2708533 2708613 -250547970 - L1MC2 LINE L1 -11 6333 6268 180 0 0 0 chr2 2708613 2708633 -250547950 + (CA)n Simple_repeat Simple_repeat 1 20 0 1036 153 178 4 chr2 2708633 2708788 -250547795 - L1MC2 LINE L1 -76 6268 6057 2069 125 7 3 chr2 2708801 2709090 -250547493 - AluSx SINE Alu -21 291 2 2438 187 17 15 chr2 2713570 2714031 -250542552 + MLT1C LTR MaLR 6 467 0 403 57 19 0 chr2 2714621 2714674 -250541909 - L1PA6 LINE L1 -5 6149 6096 3233 35 0 0 chr2 2714674 2715260 -250541323 + L1P2 LINE L1 4999 5584 -570 635 250 95 20 chr2 2715261 2715461 -250541122 - MIR SINE MIR -39 223 9 1984 142 14 3 chr2 2715614 2715909 -250540674 - AluSx SINE Alu -14 298 1 190 344 73 21 chr2 2716200 2716296 -250540287 - L2 LINE L2 -6 3307 3207 * 432 298 116 30 chr2 2716293 2716491 -250540092 + MIR SINE MIR 5 219 -43 5030 215 66 25 chr2 2716517 2718274 -250538309 + L1MDa LINE L1 21 2004 -4536 1550 77 9 18 chr2 2718273 2718495 -250538088 + L1P LINE L1 1 220 -5926 * 192 191 95 0 chr2 2920312 2920375 -250336208 + L2 LINE L2 3238 3306 -7 2714 37 0 0 chr2 2921639 2921937 -250334646 - AluY SINE Alu -13 298 1 305 203 40 0 chr2 2921938 2922012 -250334571 - MER69 DNA AcHobo -2370 156 80 27 0 0 0 chr2 2922478 2922505 -250334078 + AT_rich Low_complexity Low_complexity 1 27 0 624 168 19 0 chr2 2923023 2923130 -250333453 - FLAM_C SINE Alu -33 110 2 382 298 21 47 chr2 2923778 2923969 -250332614 + MER3 DNA MER1_type 24 209 0 313 323 168 0 chr2 2923986 2924141 -250332442 + MER5A DNA MER1_type 6 186 -3 189 306 72 39 chr2 2925821 2926001 -250330582 + L2 LINE L2 3083 3268 -4 * 202 289 0 19 chr2 2925991 2926043 -250330540 + MER5A DNA MER1_type 137 187 -2 1335 220 18 23 chr2 2927217 2927577 -250329006 - MLT1F LTR MaLR -81 461 15 437 335 24 0 chr2 2927594 2927758 -250328825 - MLT1F LTR MaLR -365 177 10 190 288 0 30 chr2 2927853 2927919 -250328664 - L2 LINE L2 -10 3262 3199 323 294 122 25 chr2 2928153 2928596 -250327987 - MLT1E LTR MaLR 0 593 35 1011 149 0 0 chr2 2928718 2928859 -250327724 - FRAM SINE Alu -17 159 19 356 321 26 75 chr2 2928983 2929070 -250327513 - L2 LINE L2 -61 3252 3162 2410 75 0 0 chr2 2929070 2929352 -250327231 - AluSp SINE Alu -23 290 9 356 321 26 75 chr2 2929352 2929613 -250326970 - L2 LINE L2 -151 3162 2921 2459 97 0 0 chr2 2929862 2930171 -250326412 - AluSx SINE Alu -3 309 1 2329 102 0 16 chr2 2930350 2930487 -250326096 + AluSx SINE Alu 1 139 -173 2248 98 0 29 chr2 2930487 2930794 -250325789 + AluSg SINE Alu 1 298 -12 2329 102 0 16 chr2 2930794 2930969 -250325614 + AluSx SINE Alu 139 308 -4 498 289 165 14 chr2 2930976 2931340 -250325243 - L2 LINE L2 -770 2544 2126 927 154 46 6 chr2 2931815 2931990 -250324593 - MER20 DNA MER1_type -1 218 37 907 225 79 48 chr2 2932086 2932441 -250324142 + MER69 DNA AcHobo 1919 2284 -242 2327 98 3 13 chr2 2932448 2932755 -250323828 + AluY SINE Alu 1 304 -7 3246 226 66 19 chr2 2932799 2933319 -250323264 - L1MD1 LINE L1 0 6242 5748 1272 97 111 0 chr2 2933319 2933526 -250323057 - MER30 DNA MER1_type 0 230 1 3246 226 66 19 chr2 2933526 2933650 -250322933 - L1MD1 LINE L1 -494 5748 5631 2299 104 3 3 chr2 2933650 2933959 -250322624 - AluSc SINE Alu 0 309 1 3246 226 66 19 chr2 2933959 2934701 -250321882 - L1MD1 LINE L1 -611 5631 4789 2400 103 0 3 chr2 2935024 2935335 -250321248 - AluSq SINE Alu -3 310 1 764 173 0 0 chr2 2936127 2936260 -250320323 + FLAM_C SINE Alu 1 133 0 1916 176 0 3 chr2 2936944 2937122 -250319461 - AluJo SINE Alu 0 312 134 2441 92 0 0 chr2 2937122 2937416 -250319167 - AluSq SINE Alu -19 294 1 1916 176 0 3 chr2 2937416 2937550 -250319033 - AluJo SINE Alu -178 134 1 368 273 54 81 chr2 2938407 2938667 -250317916 - HAL1 LINE L1 -953 1554 1302 381 248 0 0 chr2 2939592 2939705 -250316878 + (CA)n Simple_repeat Simple_repeat 1 113 0 189 0 0 0 chr2 2939931 2939952 -250316631 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 182 318 0 0 chr2 2940691 2940754 -250315829 - MIR SINE MIR -136 126 64 251 290 131 42 chr2 2940793 2940993 -250315590 + L1MC/D LINE L1 5600 5830 -1978 1918 155 17 3 chr2 2940993 2941289 -250315294 + AluJo SINE Alu 1 300 -12 251 290 131 42 chr2 2941289 2941347 -250315236 + L1MC/D LINE L1 5830 5881 -1927 197 231 0 15 chr2 2941466 2941531 -250315052 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 1138 215 53 45 chr2 2941687 2942045 -250314538 - MLT1A1 LTR MaLR -4 361 1 1395 127 143 20 chr2 2942178 2942430 -250314153 - AluJo SINE Alu -29 283 1 2449 100 0 0 chr2 2942662 2942971 -250313612 - AluSx SINE Alu -3 309 1 224 276 188 33 chr2 2943366 2943547 -250313036 - MIR SINE MIR -16 246 38 197 292 156 0 chr2 2944762 2944858 -250311725 - MIR SINE MIR -79 183 73 272 252 44 74 chr2 2945396 2945531 -250311052 - MIR SINE MIR -62 146 16 1089 0 0 0 chr2 2946358 2946479 -250310104 + (CA)n Simple_repeat Simple_repeat 1 121 0 183 42 0 0 chr2 2946479 2946503 -250310080 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 2325 208 60 19 chr2 2947839 2948259 -250308324 + MER6A DNA MER2_type -10 439 -426 2698 40 0 0 chr2 2948259 2948559 -250308024 + AluY SINE Alu 1 300 -11 2325 208 60 19 chr2 2948559 2948712 -250307871 + MER6A DNA MER2_type 439 584 -21 312 333 32 0 chr2 2948853 2948976 -250307607 - MIR SINE MIR -53 209 83 225 65 0 0 chr2 2950466 2950497 -250306086 + (TG)n Simple_repeat Simple_repeat 1 31 0 1459 205 59 38 chr2 2951358 2951890 -250304693 - LTR40a LTR ERVL 0 519 31 640 268 168 31 chr2 2952044 2952165 -250304418 + MLT1F1 LTR MaLR 1 104 -463 1679 180 40 30 chr2 2952165 2952593 -250303990 + MSTB1 LTR MaLR 1 432 0 640 268 168 31 chr2 2952593 2952959 -250303624 + MLT1F1 LTR MaLR 104 567 0 716 144 34 0 chr2 2952960 2953078 -250303505 + FLAM_A SINE Alu 1 122 -11 1985 155 0 29 chr2 2954635 2954945 -250301638 + AluJb SINE Alu 1 301 -11 2053 172 46 0 chr2 2956065 2956478 -250300105 + MSTB1 LTR MaLR 1 432 0 1899 198 96 24 chr2 2956551 2957062 -250299521 - LTR10A LTR ERV1 -61 548 1 232 263 95 73 chr2 2957093 2957230 -250299353 + MIR SINE MIR 14 153 -109 1032 278 89 47 chr2 2957801 2958399 -250298184 - MLT1E2 LTR MaLR 0 626 4 376 219 42 25 chr2 2958634 2958753 -250297830 - L1MA4A LINE L1 -1 6302 6182 626 233 8 0 chr2 2958789 2958922 -250297661 + MER58 DNA MER1_type 116 249 -92 3793 96 28 7 chr2 2959081 2959644 -250296939 + L1PA11 LINE L1 5600 6174 0 690 254 79 0 chr2 2959883 2960060 -250296523 + MER3 DNA MER1_type 3 193 -16 1973 167 3 3 chr2 2960650 2960955 -250295628 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr2 2961059 2961089 -250295494 + AT_rich Low_complexity Low_complexity 1 30 0 3944 73 15 0 chr2 2961357 2961902 -250294681 - L1PA10 LINE L1 0 6168 5616 1259 267 44 16 chr2 2963353 2963784 -250292799 - LTR47B LTR ERVL 0 443 1 757 221 79 73 chr2 2964767 2965084 -250291499 + MER5C DNA MER1_type 5 323 -1 2524 32 0 0 chr2 2965368 2965677 -250290906 - AluY SINE Alu 0 310 2 3712 199 50 1 chr2 2966242 2966606 -250289977 - L1MB8 LINE L1 0 6178 5833 1265 125 83 5 chr2 2966606 2966822 -250289761 + MER46A DNA MER2_type 2 234 -2 3712 199 50 1 chr2 2966822 2967275 -250289308 - L1MB8 LINE L1 -345 5833 5320 2497 58 52 14 chr2 2967282 2967644 -250288939 - L1PB1 LINE L1 -7 7563 7188 730 93 0 19 chr2 2967660 2967768 -250288815 - L1MA2 LINE L1 -9 6295 6190 10321 156 34 21 chr2 2967770 2968109 -250288474 - L1PB1 LINE L1 -502 7217 6884 1244 124 180 141 chr2 2968109 2968520 -250288063 - MSTA LTR MaLR -1 427 1 10321 156 34 21 chr2 2968520 2970625 -250285958 - L1PB1 LINE L1 -835 6884 4738 5026 193 47 6 chr2 2971915 2973131 -250283452 - L1PB1 LINE L1 -2826 4739 3462 210 71 0 0 chr2 2973131 2973159 -250283424 + (CCCCCT)n Simple_repeat Simple_repeat 3 30 0 3676 71 4 21 chr2 2973264 2973824 -250282759 - SVA Other Other -835 551 2 3978 249 30 34 chr2 2973868 2974070 -250282513 - L1M4 LINE L1 -1426 4720 4519 1754 153 27 10 chr2 2974070 2974371 -250282212 - AluJb SINE Alu -4 308 3 3978 249 30 34 chr2 2974371 2974587 -250281996 - L1M4 LINE L1 -1627 4519 4304 2078 128 0 0 chr2 2974587 2974893 -250281690 - AluSx SINE Alu -6 306 1 3978 249 30 34 chr2 2974893 2975828 -250280755 - L1M4 LINE L1 -1842 4304 3371 609 165 75 75 chr2 2975852 2976064 -250280519 + MER69 DNA AcHobo 2312 2523 -3 1976 120 7 7 chr2 2977866 2978165 -250278418 - AluSx SINE Alu -13 299 1 270 141 0 179 chr2 2979409 2979434 -250277149 - MER45A DNA AcHobo -1447 134 106 2137 111 0 0 chr2 2979434 2979764 -250276819 - AluSq SINE Alu 0 313 1 270 141 0 179 chr2 2979764 2979816 -250276767 - MER45A DNA AcHobo -1475 106 71 260 319 43 49 chr2 2980562 2980725 -250275858 + MIR3 SINE MIR 6 167 -41 211 315 194 6 chr2 2981028 2981193 -250275390 - MIR SINE MIR -12 250 55 2212 95 0 0 chr2 2981482 2981786 -250274797 + AluY SINE Alu 1 304 -7 1501 163 4 4 chr2 2981801 2982059 -250274524 + AluJb SINE Alu 1 258 -54 356 182 71 50 chr2 2982340 2982439 -250274144 + L1MC5 LINE L1 7831 7931 -30 1705 159 27 3 chr2 2982820 2983115 -250273468 - AluJb SINE Alu -3 309 8 510 305 121 18 chr2 2983780 2984177 -250272406 + L2 LINE L2 2264 2701 -613 242 0 61 0 chr2 2984443 2984476 -250272107 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 281 273 39 0 chr2 2984501 2984578 -250272005 + L2 LINE L2 3232 3311 -2 211 204 0 56 chr2 2984738 2984792 -250271791 + CT-rich Low_complexity Low_complexity 6 56 0 2009 130 7 0 chr2 2984837 2985144 -250271439 - AluSx SINE Alu -3 309 1 324 284 39 0 chr2 2986097 2986199 -250270384 + MIR3 SINE MIR 96 201 -7 222 246 0 31 chr2 2986325 2986390 -250270193 - MIR SINE MIR -119 143 81 29 0 0 0 chr2 2986419 2986448 -250270135 + AT_rich Low_complexity Low_complexity 1 29 0 329 129 86 0 chr2 2986668 2986738 -250269845 - MER45A DNA AcHobo -22 156 81 219 293 7 30 chr2 2986824 2987112 -250269471 + G-rich Low_complexity Low_complexity 1 281 0 326 303 66 9 chr2 2987467 2987678 -250268905 - L1MEd LINE L1 -5306 813 591 24 67 0 0 chr2 2988975 2989020 -250267563 + AT_rich Low_complexity Low_complexity 1 45 0 237 178 0 0 chr2 2989113 2989158 -250267425 + (TG)n Simple_repeat Simple_repeat 2 46 0 345 270 72 18 chr2 2989399 2989510 -250267073 + MIR SINE MIR 28 144 -118 453 296 35 7 chr2 2990059 2990201 -250266382 + Charlie8 DNA MER1_type 25 170 -2247 191 329 114 27 chr2 2990714 2990863 -250265720 + MIR3 SINE MIR 15 176 -32 417 213 150 8 chr2 2991831 2991958 -250264625 + MIR SINE MIR 97 241 -21 199 365 12 0 chr2 2992421 2992506 -250264077 - MIR3 SINE MIR -18 190 105 412 54 36 0 chr2 2992716 2992772 -250263811 + L1P4 LINE L1 5423 5480 -688 2389 101 18 3 chr2 2992782 2993120 -250263463 - L1PA11 LINE L1 -2 6172 5830 3435 121 107 10 chr2 2993120 2993703 -250262880 - L1PA16 LINE L1 -67 6099 5460 3087 79 2 7 chr2 2993702 2994118 -250262465 + L1PA11 LINE L1 5467 5880 -294 * 279 270 149 29 chr2 2994201 2994375 -250262208 - L1ME LINE L1 -299 5822 5628 1419 142 130 15 chr2 2994970 2995231 -250261352 + AluJo SINE Alu 1 291 -21 188 330 66 22 chr2 2995589 2995680 -250260903 - MIR SINE MIR -65 143 49 295 280 0 30 chr2 2996213 2996313 -250260270 + L1ME LINE L1 5691 5787 -334 259 229 76 69 chr2 2996326 2996457 -250260126 + MIR SINE MIR 131 262 0 345 271 83 57 chr2 2997521 2997872 -250258711 - L1ME4a LINE L1 -21 6100 5741 271 295 54 0 chr2 2997877 2997989 -250258594 - L1ME4a LINE L1 -525 5596 5479 303 28 0 0 chr2 2998163 2998199 -250258384 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 725 266 203 16 chr2 2998309 2998625 -250257958 - L2 LINE L2 -5 3308 2934 296 278 0 0 chr2 2998697 2998769 -250257814 - L2 LINE L2 -681 2633 2562 849 276 167 13 chr2 2998770 2999310 -250257273 - L2 LINE L2 -1123 2191 1569 1205 167 32 17 chr2 2999324 2999567 -250257016 - L1MB7 LINE L1 -218 5966 5721 604 355 108 33 chr2 2999608 3000770 -250255813 + L2 LINE L2 2005 3272 0 4590 192 43 24 chr2 3000921 3001600 -250254983 - L1M1 LINE L1 -4065 1263 599 1799 156 0 32 chr2 3001600 3001908 -250254675 - AluJb SINE Alu -14 298 1 4590 192 43 24 chr2 3001908 3002612 -250253971 - L1M1 LINE L1 -4729 599 727 1445 132 32 0 chr2 3002612 3002832 -250253751 + MER30 DNA MER1_type 3 229 -1 4590 192 43 24 chr2 3002832 3003141 -250253442 - L1M1 LINE L1 -4600 728 426 597 292 85 30 chr2 3003132 3003368 -250253215 - L1M4b LINE L1 -6296 563 315 * 857 197 82 52 chr2 3003391 3003624 -250252959 - L1M4b LINE L1 -6610 249 10 342 313 17 17 chr2 3003902 3004017 -250252566 + L2 LINE L2 3188 3302 -11 205 277 43 0 chr2 3004025 3004072 -250252511 - L2 LINE L2 -87 3185 3137 2051 85 0 11 chr2 3004083 3004364 -250252219 + AluSq SINE Alu 36 313 0 22 56 0 0 chr2 3005159 3005195 -250251388 + AT_rich Low_complexity Low_complexity 1 36 0 541 271 76 89 chr2 3005514 3005961 -250250622 - L2 LINE L2 -2 3311 2871 468 51 0 0 chr2 3007955 3008014 -250248569 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2047 112 3 0 chr2 3008014 3008310 -250248273 - AluSx SINE Alu -15 297 1 2104 99 7 3 chr2 3008314 3008608 -250247975 - AluSx SINE Alu -17 295 1 1240 244 141 74 chr2 3008959 3009094 -250247489 - Charlie7 DNA MER1_type -1751 861 736 694 47 0 0 chr2 3009094 3009203 -250247380 - L1PA4 LINE L1 0 6155 6059 1240 244 141 74 chr2 3009203 3009367 -250247216 - Charlie7 DNA MER1_type -1876 736 584 5546 118 8 4 chr2 3009367 3010629 -250245954 - L1PA15 LINE L1 -2 6163 4868 1240 244 141 74 chr2 3010629 3011135 -250245448 - Charlie7 DNA MER1_type -2028 584 1 213 43 0 65 chr2 3013920 3013966 -250242617 + (TCCCG)n Simple_repeat Simple_repeat 2 44 0 678 141 70 8 chr2 3014481 3014606 -250241977 - LTR12 LTR ERV1 -10 2428 363 591 211 0 23 chr2 3014606 3014739 -250241844 - pTR5 LTR ERV1 -910 1528 1399 282 211 0 0 chr2 3014743 3014795 -250241788 - LTR30 LTR ERV1 -670 52 1 2169 94 3 3 chr2 3014838 3015136 -250241447 - AluY SINE Alu -13 298 1 712 226 26 0 chr2 3016386 3016541 -250240042 - L1M4 LINE L1 -2229 3917 3759 1526 221 52 13 chr2 3016561 3017019 -250239564 - L1M4 LINE L1 -2545 3601 3126 453 182 65 0 chr2 3017338 3017415 -250239168 + THE1B LTR MaLR 1 82 -282 2209 114 9 24 chr2 3017421 3017753 -250238830 + THE1B LTR MaLR 38 364 0 735 259 45 53 chr2 3017762 3018005 -250238578 - MIR SINE MIR -17 245 5 276 335 180 0 chr2 3018066 3018227 -250238356 + MIR SINE MIR 58 247 -15 518 302 124 24 chr2 3018887 3019679 -250236904 - L2 LINE L2 0 3272 2325 195 125 0 0 chr2 3019711 3019751 -250236832 + (TG)n Simple_repeat Simple_repeat 1 40 0 355 324 45 73 chr2 3019768 3020018 -250236565 - MIR SINE MIR -17 245 4 196 268 110 39 chr2 3023485 3023612 -250232971 + MIR SINE MIR 51 186 -76 195 278 130 19 chr2 3024670 3024778 -250231805 + MIR SINE MIR 16 135 -127 1564 196 43 3 chr2 3025107 3025688 -250230895 - MER67B LTR ERV1 -1 660 10 814 181 0 0 chr2 3025916 3026049 -250230534 + FLAM_C SINE Alu 1 133 0 3109 109 17 11 chr2 3026164 3026632 -250229951 - LTR3b LTR ERVK -29 471 1 21 36 0 0 chr2 3028169 3028197 -250228386 + AT_rich Low_complexity Low_complexity 1 28 0 1670 199 28 25 chr2 3029236 3029593 -250226990 - MLT1A1 LTR MaLR -7 358 1 31 26 0 0 chr2 3030974 3031012 -250225571 + AT_rich Low_complexity Low_complexity 1 38 0 1847 55 13 0 chr2 3031012 3031248 -250225335 - L1PA4 LINE L1 0 6155 5917 240 175 0 0 chr2 3032475 3032515 -250224068 - MER67B LTR ERV1 -621 40 1 266 196 228 22 chr2 3032848 3032940 -250223643 - L2 LINE L2 -19 3253 3143 207 379 48 0 chr2 3033368 3033471 -250223112 + MIR SINE MIR 81 188 -74 31 0 0 0 chr2 3033809 3033840 -250222743 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr2 3034290 3034319 -250222264 + (A)n Simple_repeat Simple_repeat 1 29 0 4387 118 57 50 chr2 3035006 3035783 -250220800 + LTR1 LTR ERV1 1 782 -3 691 262 92 18 chr2 3035866 3036202 -250220381 - L1ME4a LINE L1 -251 5870 5510 953 109 0 7 chr2 3037214 3037352 -250219231 + LTR1 LTR ERV1 648 784 -1 224 219 0 0 chr2 3037435 3037476 -250219107 + (CA)n Simple_repeat Simple_repeat 1 41 0 317 222 152 30 chr2 3037981 3038080 -250218503 - L2 LINE L2 0 3313 3203 510 294 123 11 chr2 3038288 3038475 -250218108 + MIR SINE MIR 55 262 0 2909 242 18 5 chr2 3038773 3039532 -250217051 + L1 LINE L1 2258 3026 -3120 1667 61 0 5 chr2 3039533 3039731 -250216852 + AluSq SINE Alu 1 197 -116 218 288 88 25 chr2 3039799 3039959 -250216624 - L2 LINE L2 -2007 1307 1138 213 39 0 0 chr2 3040729 3040755 -250215828 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1948 146 0 0 chr2 3040757 3041032 -250215551 - AluSx SINE Alu -37 275 1 1083 166 50 15 chr2 3041474 3041673 -250214910 - AluJo SINE Alu -20 292 87 199 254 15 75 chr2 3042347 3042414 -250214169 - L2 LINE L2 -24 3289 3227 461 337 151 12 chr2 3043454 3043798 -250212785 - L2 LINE L2 -1 3312 2921 423 302 137 42 chr2 3043859 3044479 -250212104 - L2 LINE L2 -508 2806 2128 194 383 0 12 chr2 3044506 3044587 -250211996 + L2 LINE L2 3108 3187 -85 826 333 87 60 chr2 3046083 3046903 -250209680 - HAL1 LINE L1 -726 1781 940 342 327 64 0 chr2 3047228 3047384 -250209199 + MER5A DNA MER1_type 1 166 -23 250 303 0 11 chr2 3050808 3050986 -250205597 + (TG)n Simple_repeat Simple_repeat 1 176 0 309 333 20 0 chr2 3051001 3051100 -250205483 + (CATG)n Simple_repeat Simple_repeat 4 104 0 269 211 0 0 chr2 3051103 3051160 -250205423 + MER4-int LTR ERV1 1111 1167 -5431 302 264 73 0 chr2 3051160 3051270 -250205313 + (CATG)n Simple_repeat Simple_repeat 1 118 0 374 232 17 22 chr2 3051274 3051455 -250205128 + (TATG)n Simple_repeat Simple_repeat 1 180 0 308 287 0 11 chr2 3051477 3051658 -250204925 + (TATG)n Simple_repeat Simple_repeat 2 180 0 267 260 0 0 chr2 3051747 3051843 -250204740 + (TG)n Simple_repeat Simple_repeat 1 96 0 459 369 56 13 chr2 3052191 3052424 -250204159 + L2 LINE L2 997 1239 -2075 363 250 20 66 chr2 3052424 3052576 -250204007 - L1 LINE L1 -2342 3804 3660 1040 306 85 5 chr2 3053935 3054357 -250202226 + HsTC2 DNA Tc2 1 456 -1442 896 264 25 16 chr2 3054907 3055225 -250201358 + HsTC2 DNA Tc2 1573 1893 -5 4641 47 2 0 chr2 3056045 3056601 -250199982 + L1PA8 LINE L1 5612 6168 -4 216 97 0 0 chr2 3057119 3057150 -250199433 + (TG)n Simple_repeat Simple_repeat 1 31 0 2118 151 87 25 chr2 3058126 3058529 -250198054 - MSTA LTR MaLR 0 428 1 799 109 8 8 chr2 3060312 3060431 -250196152 + THE1B LTR MaLR 246 364 0 995 201 99 48 chr2 3060467 3060781 -250195802 + L1MC4 LINE L1 7543 7872 -170 182 231 0 0 chr2 3060977 3061016 -250195567 - L2 LINE L2 -1 3271 3233 577 240 35 85 chr2 3061377 3061635 -250194948 - L2 LINE L2 -5 3308 3064 393 102 0 0 chr2 3062020 3062079 -250194504 + (CA)n Simple_repeat Simple_repeat 1 59 0 989 213 262 0 chr2 3062603 3062931 -250193652 + MER47B DNA MER2_type 1 414 -4 2131 146 0 0 chr2 3064316 3064618 -250191965 - AluSx SINE Alu -10 302 1 388 311 43 25 chr2 3065392 3065553 -250191030 + L2 LINE L2 3103 3266 -6 29 60 0 0 chr2 3069033 3069083 -250187500 + AT_rich Low_complexity Low_complexity 1 50 0 375 314 65 40 chr2 3070016 3070264 -250186319 - MLT1L LTR MaLR 0 615 362 2190 120 10 3 chr2 3070508 3070809 -250185774 - AluSq SINE Alu -10 303 1 350 281 105 91 chr2 3070859 3071772 -250184811 - L1M2 LINE L1 -5584 1265 340 619 343 111 54 chr2 3071813 3073272 -250183311 + L2 LINE L2 1472 3272 0 303 304 112 31 chr2 3073622 3073783 -250182800 + MLT1I LTR MaLR 37 210 -199 213 337 174 0 chr2 3077157 3077243 -250179340 + L2 LINE L2 3158 3258 -14 1618 185 16 33 chr2 3077367 3077670 -250178913 + AluJo SINE Alu 4 301 -11 481 290 36 36 chr2 3077744 3077937 -250178646 - L1MB3 LINE L1 -9 6174 5982 2396 97 0 3 chr2 3078255 3078565 -250178018 - AluY SINE Alu -2 309 1 192 135 0 0 chr2 3079002 3079039 -250177544 + (GGGAGA)n Simple_repeat Simple_repeat 4 40 0 491 273 145 12 chr2 3079646 3079935 -250176648 + L1MC4a LINE L1 5145 5467 -743 22 80 0 0 chr2 3080195 3080245 -250176338 + AT_rich Low_complexity Low_complexity 1 50 0 201 121 0 0 chr2 3080255 3080288 -250176295 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 29 47 0 0 chr2 3080343 3080386 -250176197 + AT_rich Low_complexity Low_complexity 1 43 0 388 265 34 34 chr2 3080395 3080599 -250175984 + L1MC4a LINE L1 5729 5932 -1876 193 262 164 0 chr2 3082574 3082635 -250173948 + MIR SINE MIR 127 197 -65 252 305 24 98 chr2 3082680 3082844 -250173739 + MIR SINE MIR 110 261 -1 1603 123 36 36 chr2 3082894 3083147 -250173436 - AluSx SINE Alu 0 312 60 304 296 15 67 chr2 3083151 3083286 -250173297 - L1MB3 LINE L1 -266 5855 5728 1274 247 51 0 chr2 3083638 3084030 -250172553 + HAL1 LINE L1 1296 1707 -800 9767 39 1 183 chr2 3084031 3085745 -250170838 - SVA Other Other 0 1386 2 1408 192 25 0 chr2 3085775 3086061 -250170522 - L1MA9 LINE L1 -427 5949 5657 21 82 0 0 chr2 3086067 3086116 -250170467 + AT_rich Low_complexity Low_complexity 1 49 0 13125 199 42 67 chr2 3086692 3088563 -250168020 - L1MA9 LINE L1 -708 5668 3752 2390 89 0 0 chr2 3088563 3088855 -250167728 - AluSx SINE Alu -20 292 1 13125 199 42 67 chr2 3088855 3090826 -250165757 - L1MA9 LINE L1 -2624 3752 1733 2318 95 27 0 chr2 3090826 3091121 -250165462 + AluSg SINE Alu 1 303 -7 892 163 106 0 chr2 3091124 3091284 -250165299 + AluJo/FRAM SINE Alu 133 309 -3 13125 199 42 67 chr2 3091284 3091394 -250165189 - L1MA9 LINE L1 -4645 1731 1620 1980 171 89 30 chr2 3091394 3091798 -250164785 + MSTC LTR MaLR 1 428 0 13125 199 42 67 chr2 3091798 3093784 -250162799 - L1MA9 LINE L1 -4756 1620 1 2308 120 0 16 chr2 3094544 3094861 -250161722 - AluSq SINE Alu 0 313 2 281 293 15 108 chr2 3095203 3095478 -250161105 + MIR3 SINE MIR 12 262 0 217 228 0 63 chr2 3098441 3098599 -250157984 + (TATG)n Simple_repeat Simple_repeat 4 151 0 242 191 43 17 chr2 3098757 3098872 -250157711 + (TATG)n Simple_repeat Simple_repeat 3 120 0 188 256 12 0 chr2 3098890 3098976 -250157607 + (TATG)n Simple_repeat Simple_repeat 2 88 0 404 235 12 29 chr2 3099061 3099231 -250157352 + (TATATG)n Simple_repeat Simple_repeat 2 168 0 3911 121 27 12 chr2 3099238 3099897 -250156686 - HSMAR2 DNA Mariner -1 1301 633 2114 110 32 0 chr2 3099906 3100188 -250156395 + AluSg SINE Alu 18 308 -2 874 126 14 0 chr2 3100218 3100361 -250156222 + HSMAR2 DNA Mariner 739 883 -419 339 262 90 25 chr2 3101048 3101170 -250155413 - MIR SINE MIR -119 143 14 714 264 123 18 chr2 3101269 3101595 -250154988 - MLT1B LTR MaLR -30 360 1 375 207 5 48 chr2 3103023 3103160 -250153423 - MLT1A2 LTR MaLR -234 140 7 343 349 54 12 chr2 3103282 3103448 -250153135 + L3 LINE CR1 1192 1364 -213 256 197 15 15 chr2 3104090 3104156 -250152427 + C-rich Low_complexity Low_complexity 2 67 0 2338 83 7 0 chr2 3105194 3105483 -250151100 + AluY SINE Alu 2 292 -19 289 174 149 8 chr2 3107798 3107919 -250148664 - L1M3 LINE L1 -339 5844 5707 343 286 65 13 chr2 3108296 3108450 -250148133 - MIR3 SINE MIR -25 183 22 227 313 0 0 chr2 3112375 3112439 -250144144 + MIR SINE MIR 42 105 -103 302 244 105 27 chr2 3112905 3113059 -250143524 + MIR SINE MIR 88 262 0 405 155 10 19 chr2 3114396 3114499 -250142084 + CT-rich Low_complexity Low_complexity 3 104 0 1447 133 133 48 chr2 3114499 3114769 -250141814 - AluSx SINE Alu -19 293 1 2401 68 3 7 chr2 3116444 3116740 -250139843 + AluY SINE Alu 1 295 -16 22 35 0 0 chr2 3118134 3118163 -250138420 + AT_rich Low_complexity Low_complexity 1 29 0 2218 152 44 29 chr2 3119511 3119965 -250136618 - Charlie1a DNA MER1_type -356 1099 639 43795 35 21 1 chr2 3119982 3126012 -250130571 - L1PA3 LINE L1 0 6155 1 2203 244 41 14 chr2 3126015 3126602 -250129981 - Charlie1a DNA MER1_type -804 651 49 353 282 29 0 chr2 3126602 3126705 -250129878 - Charlie1a DNA MER1_type -1343 112 7 1114 219 11 6 chr2 3128086 3128384 -250128199 - MLT1A2 LTR MaLR -16 358 16 185 303 32 58 chr2 3129675 3129830 -250126753 + L2 LINE L2 3161 3311 -2 1145 165 176 24 chr2 3131496 3131751 -250124832 - AluJo SINE Alu -8 294 1 2195 110 0 20 chr2 3132161 3132462 -250124121 - AluSg SINE Alu -15 295 1 3070 236 91 30 chr2 3133181 3134013 -250122570 - L1ME1 LINE L1 0 6961 6182 1940 113 0 0 chr2 3134013 3134269 -250122314 - AluSc SINE Alu -17 292 37 3070 236 91 30 chr2 3134269 3135234 -250121349 - L1ME1 LINE L1 -779 6182 5050 21670 112 12 8 chr2 3135241 3138655 -250117928 - L1PA8A LINE L1 -12 6770 3371 261 0 0 0 chr2 3138655 3138684 -250117899 + (TA)n Simple_repeat Simple_repeat 1 29 0 2103 121 13 3 chr2 3138684 3138982 -250117601 - AluSg SINE Alu -9 301 1 21670 112 12 8 chr2 3138982 3139703 -250116880 - L1PA8A LINE L1 -3410 3372 2627 2100 172 31 21 chr2 3139700 3140260 -250116323 - L1PA8A LINE L1 -4559 2228 1668 * 5973 98 28 18 chr2 3140253 3141109 -250115474 - L1PA8A LINE L1 -5008 1203 339 1988 96 55 9 chr2 3141164 3141547 -250115036 - LTR7 LTR ERV1 0 450 1 3623 113 20 16 chr2 3141547 3142102 -250114481 - HERVH LTR ERV1 0 7713 7157 1659 122 16 0 chr2 3142094 3142348 -250114235 - HERVH LTR ERV1 -1696 6017 5760 * 5033 121 2 2 chr2 3142344 3143073 -250113510 - HERVH LTR ERV1 -3001 4712 3995 18715 143 9 27 chr2 3143086 3146565 -250110018 - HERVH LTR ERV1 -3979 3734 1 2074 105 31 8 chr2 3146565 3146956 -250109627 - LTR7 LTR ERV1 0 450 1 1296 227 84 27 chr2 3146956 3147362 -250109221 - L1ME1 LINE L1 -1928 5013 4585 431 119 15 0 chr2 3147361 3147428 -250109155 - L1MD3 LINE L1 -1188 6807 6740 * 1751 192 48 0 chr2 3147456 3147810 -250108773 - L1MB7 LINE L1 -26 6158 5788 * 3321 229 54 25 chr2 3147807 3148388 -250108195 - L1ME1 LINE L1 -2569 4372 3809 2246 122 48 14 chr2 3148388 3148740 -250107843 + THE1B LTR MaLR 1 364 0 3321 229 54 25 chr2 3148740 3149263 -250107320 - L1ME1 LINE L1 -3132 3809 3236 322 234 35 21 chr2 3149248 3149393 -250107190 - L1ME1 LINE L1 -4617 2324 2178 * 445 282 20 63 chr2 3149415 3149488 -250107095 - L1ME1 LINE L1 -4888 1535 1460 854 256 42 0 chr2 3149488 3149703 -250106880 - MER58A DNA MER1_type 0 224 1 445 282 20 63 chr2 3149703 3149881 -250106702 - L1ME1 LINE L1 -4963 1460 1295 870 245 50 0 chr2 3149881 3150081 -250106502 - MER58A DNA MER1_type 0 224 15 1383 218 116 9 chr2 3150081 3150512 -250106071 - L1ME1 LINE L1 -5140 1283 807 855 307 115 23 chr2 3150549 3151106 -250105477 - L1ME1 LINE L1 -5755 668 61 257 167 17 50 chr2 3152134 3152194 -250104389 - MIR SINE MIR -121 141 84 514 111 0 20 chr2 3152493 3152592 -250103991 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 1707 218 9 14 chr2 3156866 3157214 -250099369 - MER7A DNA MER2_type 0 346 3 215 360 9 9 chr2 3157340 3157451 -250099132 + MIR SINE MIR 34 144 -64 295 286 181 29 chr2 3158209 3158380 -250098203 - L3 LINE CR1 -319 1258 1062 2073 200 30 30 chr2 3158475 3158975 -250097608 - MLT1D LTR MaLR -2 503 4 2146 162 21 72 chr2 3159616 3160086 -250096497 - L1MC1 LINE L1 0 6333 5888 282 298 96 40 chr2 3160477 3160675 -250095908 - MIR SINE MIR -23 239 31 21 0 0 0 chr2 3161329 3161350 -250095233 + AT_rich Low_complexity Low_complexity 1 21 0 1913 167 0 0 chr2 3161366 3161659 -250094924 - AluJo SINE Alu -19 293 1 2288 190 36 73 chr2 3161699 3162196 -250094387 + L1MD3 LINE L1 7419 7892 -103 2490 57 0 0 chr2 3162196 3162492 -250094091 + AluY SINE Alu 1 296 -15 2288 190 36 73 chr2 3162492 3162583 -250094000 + L1MD3 LINE L1 7892 7985 -10 489 309 68 4 chr2 3162877 3163129 -250093454 - L2 LINE L2 -1332 1982 1715 337 154 0 0 chr2 3163306 3163358 -250093225 - MER20 DNA MER1_type 0 219 168 862 271 298 16 chr2 3163365 3164067 -250092516 - L2 LINE L2 -1696 1618 1115 279 0 0 0 chr2 3164067 3164098 -250092485 + (GA)n Simple_repeat Simple_repeat 2 32 0 862 271 298 16 chr2 3164098 3164371 -250092212 - L2 LINE L2 -2199 1115 368 313 261 11 23 chr2 3164382 3164470 -250092113 + L1ME LINE L1 5582 5668 -453 29 28 0 0 chr2 3164609 3164645 -250091938 + AT_rich Low_complexity Low_complexity 1 36 0 456 287 223 16 chr2 3166542 3166789 -250089794 + Tigger8 DNA MER2_type 29 326 -340 190 106 43 0 chr2 3166991 3167038 -250089545 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 429 263 227 10 chr2 3167168 3167366 -250089217 - L2 LINE L2 0 3272 3032 181 252 133 22 chr2 3167550 3167685 -250088898 - MIR SINE MIR -52 210 61 441 249 64 77 chr2 3168220 3168555 -250088028 - MLT1J2 LTR MaLR -3 416 89 240 223 277 0 chr2 3170767 3170879 -250085704 + MIR SINE MIR 112 254 -8 327 388 25 0 chr2 3171418 3171539 -250085044 + MIR SINE MIR 22 145 -63 346 286 54 65 chr2 3171547 3171732 -250084851 - MIR3 SINE MIR -6 202 20 445 220 17 12 chr2 3171732 3171905 -250084678 + CT-rich Low_complexity Low_complexity 3 176 0 917 154 149 0 chr2 3171907 3172082 -250084501 - AluJo SINE Alu -25 287 87 21 0 0 0 chr2 3172223 3172244 -250084339 + AT_rich Low_complexity Low_complexity 1 21 0 2502 101 121 16 chr2 3173284 3173671 -250082912 + MSTA LTR MaLR 1 428 0 384 22 0 0 chr2 3173751 3173796 -250082787 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 80 0 0 chr2 3175492 3175542 -250081041 + AT_rich Low_complexity Low_complexity 1 50 0 195 343 0 30 chr2 3175791 3175858 -250080725 - L2 LINE L2 -71 3201 3137 577 253 90 50 chr2 3175990 3176488 -250080095 + L1MEc LINE L1 784 1301 -5095 299 304 164 29 chr2 3176644 3176924 -250079659 - L2 LINE L2 -1682 1632 1315 4226 95 20 4 chr2 3176995 3177540 -250079043 - MER41A LTR ERV1 0 554 1 657 196 40 20 chr2 3178813 3178961 -250077622 - L1M4c LINE L1 -4860 1786 1636 * 3779 226 15 33 chr2 3178949 3179831 -250076752 - L1M4c LINE L1 -5662 880 15 322 236 0 14 chr2 3180144 3180216 -250076367 + MER94 DNA DNA 1 71 -63 227 265 0 0 chr2 3180231 3180280 -250076303 + GA-rich Low_complexity Low_complexity 2 50 0 2078 127 7 0 chr2 3180348 3180648 -250075935 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 3180856 3180877 -250075706 + AT_rich Low_complexity Low_complexity 1 21 0 1883 223 79 28 chr2 3180926 3181535 -250075048 + MER114 LTR ERV 1 640 -8 649 264 137 42 chr2 3182535 3183038 -250073545 - L1MEc LINE L1 -5812 584 34 4797 88 45 37 chr2 3184513 3185194 -250071389 - LTR12 LTR ERV1 -1 687 1 2857 80 14 8 chr2 3185421 3185783 -250070800 - THE1B LTR MaLR 0 364 1 527 297 36 10 chr2 3186272 3186464 -250070119 + MER63A DNA MER1_type 14 210 0 189 195 0 0 chr2 3187278 3187319 -250069264 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 338 253 11 22 chr2 3187320 3187391 -250069192 + L1MC4 LINE L1 6613 6684 -1358 243 0 0 0 chr2 3187391 3187418 -250069165 + (TC)n Simple_repeat Simple_repeat 2 28 0 338 253 11 22 chr2 3187418 3187437 -250069146 + L1MC4 LINE L1 6684 6702 -1340 356 215 9 0 chr2 3187537 3187644 -250068939 + (TA)n Simple_repeat Simple_repeat 2 109 0 243 0 0 0 chr2 3187649 3187676 -250068907 + (TC)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 3187675 3187695 -250068888 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 225 0 0 0 chr2 3187694 3187719 -250068864 + (CA)n Simple_repeat Simple_repeat 2 26 0 320 229 9 0 chr2 3187801 3187910 -250068673 + (TA)n Simple_repeat Simple_repeat 2 111 0 252 170 0 0 chr2 3187980 3188033 -250068550 + (TA)n Simple_repeat Simple_repeat 2 54 0 2492 166 29 45 chr2 3188035 3188503 -250068080 - MLT2B3 LTR ERVL -35 510 58 1762 166 11 65 chr2 3188505 3188861 -250067722 + MER1B DNA MER1_type 1 337 -2 542 31 0 0 chr2 3188862 3188926 -250067657 - MLT2B3 LTR ERVL -490 64 1 498 276 56 23 chr2 3189531 3189745 -250066838 - Zaphod DNA AcHobo 0 4031 3811 1919 175 55 134 chr2 3189748 3190566 -250066017 - Zaphod DNA AcHobo -2756 1275 523 234 268 71 0 chr2 3190669 3190781 -250065802 - Zaphod DNA AcHobo -3719 312 193 320 276 126 0 chr2 3192067 3192194 -250064389 + MIR3 SINE MIR 4 146 -62 2679 191 85 77 chr2 3192288 3193007 -250063576 + LTR8A LTR ERV1 1 725 -2 1799 266 19 8 chr2 3193141 3193623 -250062960 - MER41E LTR ERV1 -5 507 21 1916 171 24 0 chr2 3194018 3194358 -250062225 - MER57A LTR ERV1 -48 355 8 2024 108 4 14 chr2 3195085 3195362 -250061221 + AluSp SINE Alu 1 274 -39 3788 183 57 1 chr2 3196242 3196947 -250059636 + Tigger2 DNA MER2_type 1 744 -1974 1616 127 20 0 chr2 3197014 3197266 -250059317 + Tigger2 DNA MER2_type 2462 2718 0 3495 118 19 6 chr2 3197325 3197841 -250058742 - MER1A DNA MER1_type -6 523 1 245 285 244 16 chr2 3197869 3198062 -250058521 + MIR SINE MIR 21 257 -5 626 202 0 9 chr2 3198215 3198329 -250058254 + L2 LINE L2 3197 3309 -4 25 51 0 0 chr2 3200683 3200722 -250055861 + AT_rich Low_complexity Low_complexity 1 39 0 497 234 109 85 chr2 3201039 3201306 -250055277 - L1ME1 LINE L1 -18 6148 5875 1340 250 76 7 chr2 3201429 3201865 -250054718 - MLT1C LTR MaLR -1 466 1 192 211 0 0 chr2 3202300 3202338 -250054245 + L3 LINE CR1 1514 1551 -26 270 300 118 18 chr2 3203123 3203233 -250053350 - L2 LINE L2 0 3313 3193 1437 37 0 0 chr2 3203243 3203404 -250053179 - L1PA3 LINE L1 -3 6152 5992 825 41 0 0 chr2 3203404 3203502 -250053081 + L1PA3 LINE L1 5899 5996 -159 1904 155 0 19 chr2 3203651 3203960 -250052623 - AluJo SINE Alu -9 303 1 383 178 82 0 chr2 3204246 3204319 -250052264 + MER3 DNA MER1_type 115 193 -16 212 193 36 133 chr2 3204496 3204579 -250052004 + L2 LINE L2 3117 3191 -81 247 326 74 0 chr2 3204640 3204735 -250051848 - L2 LINE L2 -22 3250 3149 620 318 108 43 chr2 3204859 3205516 -250051067 - L2 LINE L2 -338 2976 2277 259 182 0 18 chr2 3205552 3205607 -250050976 + Ricksha DNA DNA 815 868 -1178 2207 163 52 12 chr2 3205610 3205847 -250050736 - MLT1C LTR MaLR -27 440 179 2412 94 0 0 chr2 3205847 3206156 -250050427 - AluSg SINE Alu -1 309 1 2207 163 52 12 chr2 3206156 3206323 -250050260 - MLT1C LTR MaLR -288 179 20 694 234 119 22 chr2 3206340 3206566 -250050017 + MLT1A1 LTR MaLR 11 258 -107 865 173 12 19 chr2 3206577 3206739 -250049844 + MLT1A1 LTR MaLR 205 365 0 268 276 120 26 chr2 3206759 3206951 -250049632 - L2 LINE L2 -1087 2227 2018 1699 215 27 87 chr2 3208130 3208242 -250048341 - MLT2B3 LTR ERVL -2 552 435 3568 81 25 2 chr2 3208242 3208685 -250047898 + MLT2A2 LTR ERVL 1 453 0 1699 215 27 87 chr2 3208685 3209158 -250047425 - MLT2B3 LTR ERVL -119 435 2 1266 152 156 56 chr2 3209485 3209659 -250046924 + AluJo SINE Alu 1 213 -99 2212 152 48 28 chr2 3209659 3210014 -250046569 - THE1B LTR MaLR 0 364 3 1266 152 156 56 chr2 3210014 3210109 -250046474 + AluJo SINE Alu 213 297 -15 241 143 36 18 chr2 3210886 3210942 -250045641 - L1MC4 LINE L1 -1343 6699 6643 268 329 48 14 chr2 3211708 3211854 -250044729 + L2 LINE L2 2885 3035 -237 21 0 0 0 chr2 3211961 3211982 -250044601 + AT_rich Low_complexity Low_complexity 1 21 0 10459 129 11 10 chr2 3212918 3215302 -250041281 - L1PA11 LINE L1 -2 6172 3775 2523 102 0 74 chr2 3215302 3215691 -250040892 - L1PB1 LINE L1 0 6151 5787 7150 123 13 3 chr2 3215695 3216972 -250039611 - L1MA2 LINE L1 -26 6278 4992 6549 126 2 25 chr2 3216970 3218377 -250038206 - L1PB1 LINE L1 -3 7586 6212 * 1503 249 37 0 chr2 3218373 3218810 -250037773 - L1 LINE L1 -2794 4790 4338 * 10232 125 54 9 chr2 3218944 3221242 -250035341 - L1PBa LINE L1 -3714 3148 599 1309 131 10 0 chr2 3221216 3221414 -250035169 - L1PBa LINE L1 -6663 200 1 * 14662 205 23 28 chr2 3221425 3225583 -250031000 - L1PB1 LINE L1 -2361 5223 2 514 258 50 33 chr2 3226974 3227156 -250029427 - L1MC4 LINE L1 -1373 6669 6485 275 70 0 0 chr2 3228517 3228560 -250028023 + Alu SINE Alu 260 302 0 254 69 52 69 chr2 3228693 3228751 -250027832 + MLT1B LTR MaLR 1 57 -333 186 304 120 0 chr2 3229183 3229275 -250027308 - MIR SINE MIR -71 191 89 463 279 109 80 chr2 3231499 3231866 -250024717 + MLT1H1 LTR MaLR 100 484 -71 2181 108 0 7 chr2 3231866 3232172 -250024411 + AluSx SINE Alu 1 304 -8 463 279 109 80 chr2 3232172 3232244 -250024339 + MLT1H1 LTR MaLR 484 552 -3 867 87 17 29 chr2 3233015 3233188 -250023395 + (TTCCC)n Simple_repeat Simple_repeat 3 173 0 484 328 22 11 chr2 3234026 3234209 -250022374 - MIR SINE MIR -8 254 70 2489 110 17 80 chr2 3234237 3234354 -250022229 - L1MA4A LINE L1 -11 6292 6169 2380 64 0 10 chr2 3234354 3234667 -250021916 - AluY SINE Alu -1 310 1 2489 110 17 80 chr2 3234667 3235014 -250021569 - L1MA4A LINE L1 -134 6169 5857 608 162 0 51 chr2 3235221 3235264 -250021319 + L1MA3 LINE L1 6195 6239 -66 2439 120 28 11 chr2 3235264 3235622 -250020961 + THE1B LTR MaLR 1 364 0 608 162 0 51 chr2 3235622 3235695 -250020888 + L1MA3 LINE L1 6239 6305 0 265 320 22 10 chr2 3236808 3236942 -250019641 + MIR SINE MIR 85 218 -44 241 232 85 73 chr2 3237045 3237127 -250019456 + MIR SINE MIR 87 169 -93 1841 108 7 32 chr2 3237648 3237926 -250018657 + AluSx SINE Alu 3 273 -39 228 292 0 0 chr2 3238463 3238528 -250018055 + (CAATT)n Simple_repeat Simple_repeat 3 67 0 185 250 0 18 chr2 3239758 3239814 -250016769 + L2 LINE L2 3194 3248 -24 283 175 18 0 chr2 3239814 3239871 -250016712 - MLT1I LTR MaLR 0 409 352 769 276 44 4 chr2 3239918 3240143 -250016440 - MLT1I LTR MaLR -175 234 1 2086 74 0 0 chr2 3240516 3240786 -250015797 + AluY SINE Alu 39 308 -3 2319 81 0 0 chr2 3242254 3242563 -250014020 + AluY SINE Alu 1 309 -2 2054 100 19 19 chr2 3242852 3243163 -250013420 + AluSq SINE Alu 3 313 0 803 185 43 19 chr2 3243965 3244176 -250012407 + Charlie5 DNA MER1_type 2366 2581 -31 335 279 14 0 chr2 3244244 3244391 -250012192 + CT-rich Low_complexity Low_complexity 4 152 0 2725 83 11 0 chr2 3244630 3244981 -250011602 - THE1A LTR MaLR 0 355 1 12102 93 2 1 chr2 3244981 3246558 -250010025 - THE1A-int LTR MaLR 0 1580 1 2486 104 17 20 chr2 3246558 3246914 -250009669 - THE1A LTR MaLR 0 355 1 346 307 122 55 chr2 3246982 3247220 -250009363 - L2 LINE L2 0 3272 3019 249 327 36 27 chr2 3248259 3248369 -250008214 + L2 LINE L2 3157 3267 -5 2327 103 0 0 chr2 3248434 3248746 -250007837 - AluSx SINE Alu 0 312 1 204 276 105 0 chr2 3252093 3252169 -250004414 + MIR SINE MIR 138 221 -41 248 292 123 39 chr2 3252623 3252753 -250003830 + MIR3 SINE MIR 34 174 -34 227 261 203 0 chr2 3253407 3253476 -250003107 - MIR SINE MIR -63 145 63 197 304 36 0 chr2 3253969 3254025 -250002558 + L2 LINE L2 3248 3305 -8 372 311 0 19 chr2 3254025 3254131 -250002452 + MIR SINE MIR 42 145 -63 25 51 0 0 chr2 3254222 3254261 -250002322 + AT_rich Low_complexity Low_complexity 1 39 0 432 214 119 8 chr2 3254783 3254909 -250001674 + MIR SINE MIR 113 252 -10 220 273 15 15 chr2 3255057 3255123 -250001460 + L2 LINE L2 3202 3267 -5 2202 98 0 0 chr2 3255268 3255574 -250001009 - AluSc SINE Alu -3 306 1 381 258 25 58 chr2 3255603 3255723 -250000860 + L2 LINE L2 3134 3249 -23 329 207 224 35 chr2 3255965 3256081 -250000502 - L2 LINE L2 -15 3298 3161 395 288 85 30 chr2 3257339 3257575 -249999008 + HERV16 LTR ERVL 1241 1489 -3507 379 230 11 0 chr2 3258021 3258108 -249998475 - MER53 DNA DNA -2 187 100 269 146 104 0 chr2 3259440 3259488 -249997095 + Charlie3 DNA MER1_type 2645 2697 -13 295 178 14 14 chr2 3259542 3259615 -249996968 + GA-rich Low_complexity Low_complexity 4 76 0 982 264 162 57 chr2 3259829 3260085 -249996498 - HAL1 LINE L1 -1352 1155 927 1915 141 7 0 chr2 3260085 3260384 -249996199 - AluSx SINE Alu -11 301 1 982 264 162 57 chr2 3260384 3260795 -249995788 - HAL1 LINE L1 -1580 927 418 285 232 0 0 chr2 3260858 3260927 -249995656 + CT-rich Low_complexity Low_complexity 5 73 0 3629 121 19 4 chr2 3260978 3261492 -249995091 - MER1A DNA MER1_type -5 524 3 277 303 37 28 chr2 3261736 3261845 -249994738 - L1MC4 LINE L1 -140 7902 7793 1513 203 128 30 chr2 3261860 3262298 -249994285 - MLT1D LTR MaLR -4 501 21 1782 152 18 0 chr2 3262436 3262713 -249993870 + AluJb SINE Alu 13 294 -18 412 214 128 0 chr2 3262723 3262840 -249993743 - L1MC4 LINE L1 -386 7656 7525 1838 135 44 0 chr2 3263350 3263647 -249992936 - AluSx SINE Alu -2 310 1 245 240 13 13 chr2 3263721 3263796 -249992787 + (TA)n Simple_repeat Simple_repeat 2 76 0 1800 144 0 21 chr2 3264422 3264713 -249991870 - AluJo SINE Alu -10 302 18 282 116 0 0 chr2 3264935 3264978 -249991605 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2152 98 55 33 chr2 3265028 3265395 -249991188 + THE1C LTR MaLR 1 375 0 250 328 25 34 chr2 3266063 3266182 -249990401 - MIR SINE MIR -121 141 24 244 325 51 8 chr2 3266724 3266841 -249989742 - MIR SINE MIR -90 172 51 591 134 47 20 chr2 3267946 3268298 -249988285 + (TG)n Simple_repeat Simple_repeat 1 361 0 499 180 28 17 chr2 3268313 3268491 -249988092 + (TG)n Simple_repeat Simple_repeat 1 180 0 666 124 47 9 chr2 3268524 3268863 -249987720 + (TG)n Simple_repeat Simple_repeat 1 352 0 410 117 32 11 chr2 3269138 3269232 -249987351 + (TG)n Simple_repeat Simple_repeat 1 96 0 872 196 119 35 chr2 3269241 3269559 -249987024 + MSTC LTR MaLR 42 421 -7 1102 240 50 89 chr2 3269766 3270325 -249986258 - MER89 LTR ERV1 -22 537 1 180 0 0 0 chr2 3270941 3270961 -249985622 + (TC)n Simple_repeat Simple_repeat 2 21 0 3774 157 21 97 chr2 3271897 3272108 -249984475 - MER54B LTR ERVL 0 793 568 1625 184 0 27 chr2 3272108 3272402 -249984181 - AluJb SINE Alu -26 286 1 3774 157 21 97 chr2 3272402 3273048 -249983535 - MER54B LTR ERVL -225 568 1 304 346 59 0 chr2 3275697 3275833 -249980750 - MIR SINE MIR -18 244 101 1775 194 22 27 chr2 3275905 3276272 -249980311 + MLT1A1 LTR MaLR 1 365 0 204 125 0 0 chr2 3276491 3276523 -249980060 + (CTG)n Simple_repeat Simple_repeat 2 33 0 243 216 39 0 chr2 3276638 3276689 -249979894 + CT-rich Low_complexity Low_complexity 3 55 0 257 287 151 6 chr2 3277500 3277623 -249978960 - MIR SINE MIR -61 147 30 259 279 67 39 chr2 3277702 3277806 -249978777 + MIR SINE MIR 48 154 -108 227 266 16 0 chr2 3279322 3279386 -249977197 - L2 LINE L2 -5 3267 3203 306 281 58 8 chr2 3279425 3279546 -249977037 + L1MEd LINE L1 54 180 -5939 552 231 140 52 chr2 3279866 3280174 -249976409 + L1MC4 LINE L1 7708 8042 0 655 331 84 22 chr2 3280177 3280545 -249976038 + L1MEd LINE L1 404 794 -5325 303 305 121 11 chr2 3281289 3281561 -249975022 + L1M4 LINE L1 3626 3927 -2219 531 269 87 107 chr2 3281709 3282316 -249974267 - MLT1G1 LTR MaLR 0 595 1 185 333 0 15 chr2 3282715 3282781 -249973802 - MIR SINE MIR -150 112 48 738 462 14 41 chr2 3283671 3283745 -249972838 + MER44D DNA MER2_type 1 76 -2415 180 0 0 0 chr2 3283745 3283765 -249972818 + (GA)n Simple_repeat Simple_repeat 1 20 0 738 462 14 41 chr2 3283765 3283980 -249972603 + MER44D DNA MER2_type 76 552 -57 241 248 173 51 chr2 3284066 3284280 -249972303 - L1MEc LINE L1 -1163 5052 4813 617 297 110 64 chr2 3284605 3285956 -249970627 - L1MEc LINE L1 -1672 4543 3255 2504 98 0 35 chr2 3285956 3285996 -249970587 - THE1B LTR MaLR 0 364 324 2252 95 6 38 chr2 3285996 3286312 -249970271 + AluY SINE Alu 1 306 -5 2504 98 0 35 chr2 3286312 3286648 -249969935 - THE1B LTR MaLR -40 324 1 10460 108 33 34 chr2 3286648 3288230 -249968353 - THE1B-int LTR MaLR 0 1580 1 2611 123 0 3 chr2 3288230 3288595 -249967988 - THE1B LTR MaLR 0 364 1 617 297 110 64 chr2 3288595 3289030 -249967553 - L1MEc LINE L1 -2959 3256 2673 4084 237 79 18 chr2 3289160 3290573 -249966010 - L1MC/D LINE L1 -743 5821 4424 592 183 46 8 chr2 3290617 3290748 -249965835 - L1 LINE L1 -1862 4284 4149 * 5910 126 28 22 chr2 3290746 3291973 -249964610 - L1P4 LINE L1 -587 5581 4364 3534 274 24 24 chr2 3291995 3293158 -249963425 - L1MC/D LINE L1 -4878 1167 5 965 222 4 12 chr2 3293172 3293424 -249963159 - L1MEc LINE L1 -3951 2445 2196 1559 93 0 0 chr2 3293459 3293652 -249962931 + AluSg1 SINE Alu 9 201 -108 227 148 37 0 chr2 3293752 3293806 -249962777 + C-rich Low_complexity Low_complexity 2 57 0 228 111 0 0 chr2 3294196 3294232 -249962351 + (T)n Simple_repeat Simple_repeat 1 36 0 22298 154 25 41 chr2 3295264 3296189 -249960394 - L1PB1 LINE L1 -1 6465 5527 2872 93 0 3 chr2 3296189 3296565 -249960018 - THE1C LTR MaLR 0 375 1 22298 154 25 41 chr2 3296565 3297358 -249959225 - L1PB1 LINE L1 -939 5527 4723 1841 126 18 22 chr2 3297358 3297636 -249958947 - AluSx SINE Alu 0 312 36 22298 154 25 41 chr2 3297636 3297698 -249958885 - L1PB1 LINE L1 -1743 4723 4662 6544 71 0 2 chr2 3297698 3299362 -249957221 - L1PA8A LINE L1 -3 6128 4477 5737 38 0 18 chr2 3299367 3300072 -249956511 - L1PA4 LINE L1 0 6155 5464 22298 154 25 41 chr2 3300072 3301264 -249955319 - L1PB1 LINE L1 -1808 4658 3448 234 0 0 0 chr2 3301264 3301290 -249955293 + (TA)n Simple_repeat Simple_repeat 2 27 0 22298 154 25 41 chr2 3301290 3304807 -249951776 - L1PB1 LINE L1 -3018 3448 1 4541 206 16 2 chr2 3304817 3305751 -249950832 - L1 LINE L1 -1773 4373 3427 336 270 138 7 chr2 3307010 3307162 -249949421 - MIR SINE MIR -79 183 12 215 342 63 54 chr2 3309577 3309799 -249946784 - L2 LINE L2 -125 3147 2924 3580 75 25 2 chr2 3311079 3311559 -249945024 + L1PA8 LINE L1 5682 6172 0 483 247 121 6 chr2 3312229 3312411 -249944172 + MIR SINE MIR 59 261 -1 281 250 218 16 chr2 3313193 3313445 -249943138 - L1ME4a LINE L1 -4 6117 5815 23 0 0 0 chr2 3313476 3313499 -249943084 + AT_rich Low_complexity Low_complexity 1 23 0 409 269 154 29 chr2 3313755 3313930 -249942653 - Charlie8 DNA MER1_type -2195 222 26 237 363 50 16 chr2 3314338 3314520 -249942063 - MIR SINE MIR -73 189 2 316 275 128 0 chr2 3315649 3315758 -249940825 - L2 LINE L2 -3 3310 3188 2367 92 7 3 chr2 3316097 3316400 -249940183 - AluSx SINE Alu -8 304 1 230 206 118 0 chr2 3318177 3318245 -249938338 - MIR3 SINE MIR -21 187 112 21 36 0 0 chr2 3318783 3318811 -249937772 + AT_rich Low_complexity Low_complexity 1 28 0 195 136 0 58 chr2 3319021 3319124 -249937459 + (TA)n Simple_repeat Simple_repeat 1 97 0 186 133 0 0 chr2 3319776 3319806 -249936777 + (T)n Simple_repeat Simple_repeat 1 30 0 187 221 0 88 chr2 3320954 3321022 -249935561 + MIR SINE MIR 109 170 -92 315 62 0 42 chr2 3322184 3322232 -249934351 + Alu SINE Alu 250 295 -6 1349 280 48 26 chr2 3322232 3322914 -249933669 - L1MEc LINE L1 -4222 2174 1478 1913 142 79 17 chr2 3323935 3324288 -249932295 + THE1C LTR MaLR 1 375 0 386 267 62 67 chr2 3325189 3325399 -249931184 - MLT1K LTR MaLR 0 588 380 256 250 0 112 chr2 3325425 3325541 -249931042 - L2 LINE L2 -18 3295 3193 1782 196 88 60 chr2 3325927 3326426 -249930157 - MLT2B1 LTR ERVL -3 517 5 330 317 81 16 chr2 3326427 3326613 -249929970 - MIR SINE MIR -25 237 40 201 250 26 13 chr2 3327874 3327950 -249928633 + CT-rich Low_complexity Low_complexity 3 79 0 215 237 278 18 chr2 3329065 3329234 -249927349 - MIR SINE MIR -20 242 30 299 310 8 0 chr2 3329877 3330006 -249926577 + (TG)n Simple_repeat Simple_repeat 2 131 0 423 322 0 0 chr2 3330025 3330205 -249926378 + (TG)n Simple_repeat Simple_repeat 1 180 0 2282 266 70 14 chr2 3330786 3331737 -249924846 - Charlie2 DNA MER1_type 0 2862 1858 464 284 64 36 chr2 3331757 3332007 -249924576 - Charlie2 DNA MER1_type -2560 302 46 497 287 18 24 chr2 3332014 3332181 -249924402 - MER5B DNA MER1_type -12 166 1 204 276 83 70 chr2 3333052 3333208 -249923375 + L2 LINE L2 3155 3312 -1 3064 196 16 13 chr2 3333626 3334260 -249922323 - L1MA4 LINE L1 -6 6294 5659 2019 144 42 31 chr2 3335386 3335746 -249920837 + THE1B LTR MaLR 1 364 0 392 215 0 0 chr2 3335919 3336012 -249920571 - L1MB8 LINE L1 -2 6176 6084 2130 222 45 8 chr2 3336024 3336515 -249920068 - L1MB4 LINE L1 -13 6167 5659 248 222 34 26 chr2 3337049 3337166 -249919417 + (TA)n Simple_repeat Simple_repeat 2 119 0 243 175 48 16 chr2 3337882 3337945 -249918638 + MIR SINE MIR 104 168 -94 306 290 128 39 chr2 3338686 3339027 -249917556 - L2 LINE L2 -183 3130 2705 183 311 123 0 chr2 3339056 3339162 -249917421 - L2 LINE L2 -703 2611 2493 809 263 10 0 chr2 3339212 3339406 -249917177 - MLT1A1 LTR MaLR 0 365 170 788 167 29 64 chr2 3339510 3339714 -249916869 - MLT1A1 LTR MaLR -176 198 2 1617 199 178 20 chr2 3341063 3341108 -249915475 - MLT2B2 LTR ERVL 0 515 478 240 35 0 0 chr2 3341108 3341137 -249915446 + (CA)n Simple_repeat Simple_repeat 2 30 0 1617 199 178 20 chr2 3341137 3341534 -249915049 - MLT2B2 LTR ERVL -37 478 3 2365 127 25 0 chr2 3341679 3342034 -249914549 - THE1B LTR MaLR 0 364 1 3893 75 26 0 chr2 3342034 3342530 -249914053 - THE1B-int LTR MaLR 0 1580 1072 4401 164 33 33 chr2 3342531 3343518 -249913065 - MER11C LTR ERVK 0 1071 1 6923 116 19 40 chr2 3343518 3344602 -249911981 - THE1B-int LTR MaLR -519 1061 1 2319 130 28 3 chr2 3344602 3344956 -249911627 - THE1B LTR MaLR 0 364 2 275 317 49 21 chr2 3344998 3345140 -249911443 - MIR3 SINE MIR -60 148 3 2095 118 180 114 chr2 3345434 3346002 -249910581 + LTR18B LTR ERVL 1 605 -9 267 317 50 17 chr2 3346091 3346211 -249910372 + MIR SINE MIR 22 145 -117 1642 183 49 24 chr2 3346668 3346996 -249909587 - MLT1A1 LTR MaLR -4 361 26 216 0 0 0 chr2 3348322 3348346 -249908237 + (T)n Simple_repeat Simple_repeat 1 24 0 219 336 37 15 chr2 3349104 3349238 -249907345 + MIR SINE MIR 16 152 -56 2529 116 3 0 chr2 3350644 3350998 -249905585 + THE1A LTR MaLR 1 355 0 1358 147 0 9 chr2 3352305 3352516 -249904067 - AluJb SINE Alu -20 292 84 326 253 110 24 chr2 3352714 3352858 -249903725 - MER5B DNA MER1_type -24 165 2 200 339 77 15 chr2 3353388 3353518 -249903065 - MIR3 SINE MIR -6 202 65 2228 148 36 17 chr2 3353672 3354029 -249902554 + THE1B LTR MaLR 1 364 0 182 193 35 70 chr2 3354503 3354560 -249902023 - MIR3 SINE MIR -54 154 100 1111 124 34 51 chr2 3354658 3354837 -249901746 - L1MA8 LINE L1 -10 6281 6104 2188 113 3 0 chr2 3354837 3355140 -249901443 + AluSx SINE Alu 1 304 0 1111 124 34 51 chr2 3355140 3355193 -249901390 - L1MA8 LINE L1 -187 6104 6052 307 286 0 0 chr2 3355235 3355312 -249901271 + MIR SINE MIR 173 249 -13 472 306 40 5 chr2 3355401 3355600 -249900983 - MIR SINE MIR -7 255 50 237 204 0 0 chr2 3356243 3356292 -249900291 - L3 LINE CR1 -180 1397 1349 21 0 0 0 chr2 3356634 3356655 -249899928 + AT_rich Low_complexity Low_complexity 1 21 0 255 232 29 14 chr2 3356755 3356824 -249899759 - MLT1I LTR MaLR -30 379 310 264 356 29 19 chr2 3357042 3357250 -249899333 - L1M4 LINE L1 -1333 4813 4604 4637 205 19 12 chr2 3357286 3358484 -249898099 - L1PA16 LINE L1 -722 5444 4232 4068 137 63 1 chr2 3358484 3359149 -249897434 + L1PA16 LINE L1 5452 6157 -9 39 0 0 0 chr2 3359559 3359598 -249896985 + AT_rich Low_complexity Low_complexity 1 39 0 273 183 0 0 chr2 3359854 3359914 -249896669 + (TA)n Simple_repeat Simple_repeat 2 61 0 467 322 91 10 chr2 3360145 3360539 -249896044 - HAL1 LINE L1 -855 1652 1227 468 286 36 96 chr2 3360561 3360977 -249895606 - L1MEd LINE L1 -5034 1085 695 217 358 37 19 chr2 3361681 3361843 -249894740 - L3 LINE CR1 -606 971 807 3598 137 18 0 chr2 3362009 3362521 -249894062 + MER1A DNA MER1_type 1 521 -8 276 331 108 7 chr2 3362675 3362823 -249893760 + MIR SINE MIR 49 211 -51 744 212 38 11 chr2 3363462 3363646 -249892937 + MER5A DNA MER1_type 1 189 0 215 205 0 0 chr2 3364464 3364503 -249892080 + GA-rich Low_complexity Low_complexity 1 39 0 211 317 98 55 chr2 3365931 3366095 -249890488 - MIR3 SINE MIR -32 176 6 242 222 14 28 chr2 3366793 3366865 -249889718 + CT-rich Low_complexity Low_complexity 2 72 0 203 200 0 40 chr2 3367484 3367534 -249889049 + C-rich Low_complexity Low_complexity 5 52 0 1123 293 43 5 chr2 3368096 3368536 -249888047 + MLT1C LTR MaLR 1 457 -10 2848 85 0 0 chr2 3368697 3369061 -249887522 + THE1B LTR MaLR 1 364 0 192 302 128 20 chr2 3369697 3369846 -249886737 + MIR3 SINE MIR 33 197 -11 236 221 143 0 chr2 3370314 3370391 -249886192 - MER5A DNA MER1_type -80 109 22 219 233 0 0 chr2 3372114 3372157 -249884426 + (CAT)n Simple_repeat Simple_repeat 3 45 0 227 255 0 0 chr2 3374366 3374417 -249882166 + PABL_B LTR ERV1 1 51 -616 272 336 96 64 chr2 3374455 3374767 -249881816 + PABL_A LTR ERV1 25 346 -314 820 229 36 32 chr2 3374938 3375191 -249881392 + PABL_B LTR ERV1 414 667 0 230 254 17 0 chr2 3375888 3375947 -249880636 + L3 LINE CR1 1515 1574 -3 771 170 7 22 chr2 3376664 3376799 -249879784 + FLAM_C SINE Alu 1 133 0 377 306 23 12 chr2 3376879 3377052 -249879531 - HAL1 LINE L1 -89 2418 2244 811 287 120 40 chr2 3377289 3378095 -249878488 - HAL1 LINE L1 -604 1903 1033 1319 119 39 153 chr2 3378099 3378459 -249878124 - L1MA4A LINE L1 0 6303 5985 900 216 42 0 chr2 3378722 3378912 -249877671 - MER58A DNA MER1_type -3 221 24 241 305 51 0 chr2 3379032 3379150 -249877433 - HAL1 LINE L1 -1777 730 607 277 344 2 11 chr2 3379259 3379370 -249877213 + MER5A DNA MER1_type 67 172 -6 226 277 161 15 chr2 3379931 3380068 -249876515 + MER110 LTR ERV1 307 463 -28 240 200 0 0 chr2 3381620 3381670 -249874913 + (TG)n Simple_repeat Simple_repeat 1 50 0 3268 84 34 2 chr2 3381928 3382366 -249874217 + MLT2A2 LTR ERVL 2 453 0 43778 78 13 4 chr2 3382366 3387970 -249868613 + HERVL-A2 LTR ERVL 1 5654 0 3094 97 26 29 chr2 3387970 3388381 -249868202 + MLT2A2 LTR ERVL 1 411 -42 198 0 0 0 chr2 3388381 3388403 -249868180 + (TA)n Simple_repeat Simple_repeat 2 23 0 375 23 0 0 chr2 3388409 3388453 -249868130 + (TC)n Simple_repeat Simple_repeat 1 44 0 3094 97 26 29 chr2 3388453 3388488 -249868095 + MLT2A2 LTR ERVL 416 453 0 1271 160 106 57 chr2 3388886 3389168 -249867415 - AluJo SINE Alu -16 296 1 489 279 132 11 chr2 3389675 3389865 -249866718 + MIR SINE MIR 50 262 0 1500 204 56 66 chr2 3390656 3391049 -249865534 + MLT1B LTR MaLR 1 389 -1 328 248 95 19 chr2 3391071 3391176 -249865407 - L1ME3A LINE L1 -223 5947 5835 1578 90 0 0 chr2 3393079 3393290 -249863293 - L1PA8 LINE L1 0 6172 5962 1841 122 38 94 chr2 3394024 3394079 -249862504 + THE1C LTR MaLR 1 58 -317 2373 94 7 0 chr2 3394079 3394387 -249862196 + AluSx SINE Alu 1 310 -2 1841 122 38 94 chr2 3394387 3394726 -249861857 + THE1C LTR MaLR 58 373 -2 299 132 0 19 chr2 3395247 3395300 -249861283 + THE1C LTR MaLR 124 175 -200 202 178 56 33 chr2 3396036 3396126 -249860457 + (TA)n Simple_repeat Simple_repeat 1 92 0 26 30 0 0 chr2 3396210 3396243 -249860340 + AT_rich Low_complexity Low_complexity 1 33 0 1124 110 12 18 chr2 3397250 3397413 -249859170 - AluJ SINE Alu -11 301 140 333 132 19 0 chr2 3397697 3397750 -249858833 + MSTA LTR MaLR 1 54 -374 239 185 0 37 chr2 3397766 3397820 -249858763 - AluJ SINE Alu -169 133 82 298 270 13 19 chr2 3398018 3398177 -249858406 + (TA)n Simple_repeat Simple_repeat 2 159 0 189 74 0 0 chr2 3398177 3398204 -249858379 + (GA)n Simple_repeat Simple_repeat 2 28 0 1771 126 0 39 chr2 3399174 3399384 -249857199 + Charlie3 DNA MER1_type 1 218 -2494 2735 93 11 13 chr2 3399384 3399760 -249856823 - THE1C LTR MaLR 0 375 1 1771 126 0 39 chr2 3399760 3399944 -249856639 + Charlie3 DNA MER1_type 218 2712 0 1399 204 37 74 chr2 3400361 3400764 -249855819 - MLT1B LTR MaLR -2 388 1 439 248 7 7 chr2 3400911 3401060 -249855523 + CT-rich Low_complexity Low_complexity 4 152 0 309 294 164 36 chr2 3401273 3401711 -249854872 + L1ME4a LINE L1 5448 5941 -180 200 83 0 28 chr2 3404099 3404135 -249852448 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 19646 55 1 1 chr2 3404135 3407341 -249849242 - L1PA5 LINE L1 -24 6130 2926 207 236 83 14 chr2 3408816 3408888 -249847695 + MIR SINE MIR 48 124 -138 288 250 14 19 chr2 3408896 3409050 -249847533 - MLT1J1 LTR MaLR -11 500 237 354 321 37 21 chr2 3409206 3409393 -249847190 - MLT1J2 LTR MaLR -254 196 7 208 356 22 0 chr2 3409402 3409492 -249847091 + MIR SINE MIR 166 257 -5 21 0 0 0 chr2 3409715 3409736 -249846847 + AT_rich Low_complexity Low_complexity 1 21 0 185 238 0 0 chr2 3409891 3409933 -249846650 + MIR SINE MIR 203 244 -18 1488 229 31 3 chr2 3411211 3411564 -249845019 - MLT1A1 LTR MaLR 0 365 3 2293 70 47 3 chr2 3411717 3412015 -249844568 + AluSq SINE Alu 1 311 -2 192 40 0 0 chr2 3412267 3412292 -249844291 + (CA)n Simple_repeat Simple_repeat 1 25 0 475 266 49 21 chr2 3412341 3412484 -249844099 - MIR SINE MIR -112 150 4 280 312 14 7 chr2 3412862 3413003 -249843580 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 258 273 65 79 chr2 3414820 3414959 -249841624 + MIR SINE MIR 8 144 -118 5809 143 5 4 chr2 3416527 3417447 -249839136 - L1MA5 LINE L1 0 6300 5380 339 65 0 0 chr2 3418053 3418099 -249838484 + (TG)n Simple_repeat Simple_repeat 2 47 0 269 362 7 33 chr2 3420001 3420153 -249836430 - MIR SINE MIR -113 149 2 292 335 58 29 chr2 3420249 3420422 -249836161 + MIR SINE MIR 4 181 -81 809 119 0 84 chr2 3423078 3423221 -249833362 - L1PB4 LINE L1 -1 6155 6025 1295 193 89 50 chr2 3424119 3424456 -249832127 + MLT1B LTR MaLR 4 353 -37 374 271 25 8 chr2 3424733 3424851 -249831732 - L1ME3 LINE L1 -135 6027 5908 1925 251 75 56 chr2 3424857 3425045 -249831538 - L1MEc LINE L1 -3609 2606 2423 2205 114 7 0 chr2 3425045 3425343 -249831240 - AluSx SINE Alu -12 300 1 1925 251 75 56 chr2 3425343 3426511 -249830072 - L1MEc LINE L1 -3792 2423 1265 31 0 0 0 chr2 3427704 3427735 -249828848 + AT_rich Low_complexity Low_complexity 1 31 0 603 196 227 54 chr2 3429190 3429553 -249827030 - MLT1C LTR MaLR 0 390 1 289 310 90 19 chr2 3431493 3431761 -249824822 - LTR16C LTR ERVL -18 473 187 246 128 0 0 chr2 3432049 3432088 -249824495 + (TG)n Simple_repeat Simple_repeat 2 40 0 384 305 148 24 chr2 3432158 3432368 -249824215 - MIR SINE MIR -7 255 20 230 288 0 15 chr2 3433008 3433074 -249823509 - MIR SINE MIR -176 86 22 333 235 6 41 chr2 3433417 3433587 -249822996 + GA-rich Low_complexity Low_complexity 4 167 0 505 303 109 45 chr2 3433591 3434059 -249822524 - L2 LINE L2 -1686 1628 1131 208 326 57 7 chr2 3434080 3434221 -249822362 - L2 LINE L2 -2879 435 288 243 114 0 89 chr2 3434267 3434346 -249822237 + (TAATG)n Simple_repeat Simple_repeat 4 75 0 1352 271 130 23 chr2 3434389 3435041 -249821542 - L2 LINE L2 -2381 933 212 437 194 121 40 chr2 3435049 3435173 -249821410 - MER45A DNA AcHobo -35 143 10 199 268 177 30 chr2 3435202 3435366 -249821217 - L2 LINE L2 -3091 223 36 536 144 25 8 chr2 3436289 3436407 -249820176 + CT-rich Low_complexity Low_complexity 3 122 0 225 284 211 16 chr2 3436411 3436605 -249819978 + L2 LINE L2 1607 1838 -1476 1399 262 203 41 chr2 3436705 3437255 -249819328 + L2 LINE L2 2054 2513 -800 1707 166 3 18 chr2 3437255 3437570 -249819013 - AluSx SINE Alu 0 313 3 1399 262 203 41 chr2 3437570 3438051 -249818532 + L2 LINE L2 2513 3287 -26 1992 72 103 0 chr2 3440141 3440434 -249816149 + AluSp SINE Alu 1 320 0 15668 113 82 4 chr2 3440540 3440552 -249816031 - L1P LINE L1 -2149 3997 3987 9439 93 9 2 chr2 3440552 3442594 -249813989 - L1PA7 LINE L1 -3 6466 4427 15668 113 82 4 chr2 3442594 3443937 -249812646 - L1P LINE L1 -2159 3987 2751 396 0 0 0 chr2 3443937 3443981 -249812602 + (TA)n Simple_repeat Simple_repeat 2 45 0 15668 113 82 4 chr2 3443981 3445134 -249811449 - L1P LINE L1 -3395 2751 1291 414 103 0 0 chr2 3445131 3445189 -249811394 - L1PA7 LINE L1 -6393 68 11 * 3516 197 22 3 chr2 3445179 3445890 -249810693 - L1MB1 LINE L1 -190 5978 5254 1208 214 23 7 chr2 3445895 3446194 -249810389 - L1MB1 LINE L1 -3045 3101 2798 1157 264 32 19 chr2 3446194 3446508 -249810075 + MLT1E LTR MaLR 276 593 0 239 265 15 15 chr2 3447553 3447621 -249808962 + MIR SINE MIR 82 149 -113 192 158 0 0 chr2 3448844 3448882 -249807701 + CT-rich Low_complexity Low_complexity 2 39 0 860 275 36 20 chr2 3448942 3449193 -249807390 + MIR SINE MIR 5 259 -3 348 24 0 0 chr2 3449896 3449937 -249806646 + (TG)n Simple_repeat Simple_repeat 2 42 0 1440 282 123 17 chr2 3450645 3451180 -249805403 - MLT1E LTR MaLR 0 593 2 234 241 41 123 chr2 3451443 3451613 -249804970 + L2 LINE L2 2926 3081 -191 359 247 0 7 chr2 3451658 3451812 -249804771 + (CTA)n Simple_repeat Simple_repeat 1 153 0 288 289 117 0 chr2 3451893 3452021 -249804562 - MIR SINE MIR -8 254 112 2054 118 52 17 chr2 3452105 3452452 -249804131 + L1MA5A LINE L1 5936 6294 -3 234 244 219 24 chr2 3452663 3452786 -249803797 + MIR SINE MIR 115 261 -1 276 111 0 0 chr2 3456008 3456053 -249800530 + (CA)n Simple_repeat Simple_repeat 1 45 0 1629 140 61 0 chr2 3457749 3458013 -249798570 + L1PA15 LINE L1 5880 6159 -6 2076 113 0 0 chr2 3458272 3458628 -249797955 - AluSx SINE Alu 0 356 1 1639 248 101 30 chr2 3459007 3459883 -249796700 + Charlie2a DNA MER1_type 632 1610 -1252 250 240 11 70 chr2 3459945 3460068 -249796515 - MLT1H LTR MaLR -3 621 431 41 36 0 0 chr2 3460527 3460582 -249796001 + AT_rich Low_complexity Low_complexity 1 55 0 347 120 57 34 chr2 3460591 3460766 -249795817 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 25 0 0 0 chr2 3460773 3460798 -249795785 + AT_rich Low_complexity Low_complexity 1 25 0 232 97 56 14 chr2 3460818 3460890 -249795693 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 33 43 0 0 chr2 3460913 3460960 -249795623 + AT_rich Low_complexity Low_complexity 1 47 0 257 250 38 50 chr2 3461295 3461375 -249795208 + MER5A DNA MER1_type 106 184 -5 187 246 211 0 chr2 3461556 3461613 -249794970 + L2 LINE L2 3233 3301 -12 997 152 5 91 chr2 3461613 3461811 -249794772 + AluJo SINE Alu 84 264 -48 2321 70 13 20 chr2 3461878 3462180 -249794403 + AluSc SINE Alu 3 302 -7 315 0 0 0 chr2 3462746 3462781 -249793802 + (CA)n Simple_repeat Simple_repeat 2 36 0 763 216 0 8 chr2 3463491 3463625 -249792958 + FLAM_A SINE Alu 1 133 0 466 252 25 0 chr2 3463855 3463974 -249792609 - Charlie8 DNA MER1_type -2250 167 46 1630 153 130 84 chr2 3464397 3464860 -249791723 - MER74A LTR ERVL -60 498 15 23 0 0 0 chr2 3466158 3466181 -249790402 + GC_rich Low_complexity Low_complexity 1 23 0 236 53 26 0 chr2 3467183 3467221 -249789362 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1535 176 47 0 chr2 3467228 3467506 -249789077 - AluJo SINE Alu -21 291 1 307 231 15 0 chr2 3467508 3467573 -249789010 - MIR SINE MIR -106 102 37 2169 111 14 0 chr2 3468828 3469125 -249787458 + AluSx SINE Alu 1 301 -11 450 155 0 0 chr2 3469467 3469538 -249787045 + Alu SINE Alu 218 288 -22 896 236 73 45 chr2 3469548 3469947 -249786636 + L1MC5 LINE L1 7508 7917 -44 1780 221 92 25 chr2 3469967 3470532 -249786051 + L1ME3A LINE L1 5554 6156 -14 31 0 0 0 chr2 3470533 3470564 -249786019 + AT_rich Low_complexity Low_complexity 1 31 0 1150 71 0 0 chr2 3470577 3470717 -249785866 + AluSq SINE Alu 33 172 -141 514 272 70 35 chr2 3471148 3471376 -249785207 - MIR SINE MIR -10 252 17 238 138 35 69 chr2 3472139 3472197 -249784386 - MLT1C LTR MaLR -411 56 1 904 191 0 0 chr2 3472800 3472957 -249783626 + FRAM SINE Alu 5 161 -5 1854 130 0 60 chr2 3474076 3474436 -249782147 - AluSx SINE Alu 0 342 1 2238 96 0 3 chr2 3474883 3475176 -249781407 - AluSx SINE Alu -3 309 18 2013 144 3 0 chr2 3475503 3475801 -249780782 - AluSx SINE Alu -13 299 1 422 281 111 79 chr2 3475819 3476172 -249780411 - L1MC5 LINE L1 -48 7913 7550 334 257 19 9 chr2 3476345 3476450 -249780133 - L1MC4 LINE L1 -1 8041 7936 347 284 74 7 chr2 3476455 3476603 -249779980 - L1MC4 LINE L1 -196 7846 7689 468 195 85 8 chr2 3476634 3476752 -249779831 - L1MC4 LINE L1 -582 7460 7334 278 252 53 73 chr2 3476757 3476834 -249779749 - L1MC4 LINE L1 -780 7262 7188 1866 166 0 13 chr2 3476834 3477136 -249779447 + AluJb SINE Alu 2 299 -13 278 252 53 73 chr2 3477136 3477209 -249779374 - L1MC4 LINE L1 -854 7188 7115 180 0 0 0 chr2 3477335 3477355 -249779228 + (A)n Simple_repeat Simple_repeat 1 20 0 1674 126 65 51 chr2 3477903 3478197 -249778386 - AluJb SINE Alu -14 298 1 236 143 102 0 chr2 3478746 3478795 -249777788 + L2 LINE L2 3248 3301 -12 2055 102 60 0 chr2 3479339 3479622 -249776961 + AluSx SINE Alu 1 300 -12 287 313 81 0 chr2 3479624 3479723 -249776860 - L2 LINE L2 -14 3299 3193 945 184 40 0 chr2 3479961 3480189 -249776394 + L1MA4 LINE L1 6060 6296 -4 287 212 61 30 chr2 3480430 3480496 -249776087 + MIR SINE MIR 34 101 -107 287 299 118 16 chr2 3480524 3480651 -249775932 + MIR SINE MIR 93 232 -30 399 184 0 0 chr2 3481205 3481292 -249775291 + GA-rich Low_complexity Low_complexity 4 90 0 2341 104 0 3 chr2 3481351 3481660 -249774923 + AluSc SINE Alu 1 308 -1 280 266 86 40 chr2 3482033 3482358 -249774225 + L1ME4a LINE L1 5665 6015 -106 1878 221 97 34 chr2 3483593 3484178 -249772405 - MLT1E3 LTR MaLR 0 624 3 1559 171 45 42 chr2 3484323 3484633 -249771950 + AluJo SINE Alu 1 311 -1 270 0 0 0 chr2 3484767 3484797 -249771786 + (CA)n Simple_repeat Simple_repeat 1 30 0 28 48 0 0 chr2 3485173 3485215 -249771368 + AT_rich Low_complexity Low_complexity 1 42 0 510 31 0 0 chr2 3485497 3485561 -249771022 + (CA)n Simple_repeat Simple_repeat 1 64 0 2343 88 0 23 chr2 3485871 3486179 -249770404 - AluSx SINE Alu -11 301 1 196 280 70 50 chr2 3486238 3486338 -249770245 - MIR SINE MIR -133 129 28 732 315 113 5 chr2 3487676 3488057 -249768526 + MER70B LTR ERVL 4 425 -153 351 0 0 0 chr2 3488093 3488132 -249768451 + (TA)n Simple_repeat Simple_repeat 1 39 0 665 292 56 9 chr2 3488483 3488699 -249767884 + MIR SINE MIR 14 239 -23 329 241 99 1 chr2 3488918 3489040 -249767543 - MLT1H1 LTR MaLR -1 554 408 472 228 37 29 chr2 3489129 3489265 -249767318 - MER58B DNA MER1_type -1 340 204 628 308 58 31 chr2 3489352 3489612 -249766971 - MLT1H1 LTR MaLR -288 267 1 1545 231 44 20 chr2 3490177 3490628 -249765955 - MLT1C LTR MaLR 0 467 6 194 0 39 0 chr2 3490742 3490768 -249765815 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2148 119 3 19 chr2 3491082 3491393 -249765190 + AluSx SINE Alu 1 306 -6 1935 166 7 0 chr2 3491529 3491830 -249764753 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 3492093 3492114 -249764469 + AT_rich Low_complexity Low_complexity 1 21 0 370 274 85 54 chr2 3492360 3492886 -249763697 + L1ME3 LINE L1 2086 2585 -3630 1111 282 80 32 chr2 3492934 3493850 -249762733 + L1M4 LINE L1 3923 4882 -1264 296 242 33 33 chr2 3494066 3494157 -249762426 + L1MC4 LINE L1 7473 7563 -479 836 258 107 59 chr2 3494220 3495159 -249761424 + L1ME3 LINE L1 4179 5162 -1053 8176 200 42 55 chr2 3495244 3497436 -249759147 + L1MA4 LINE L1 12 2233 -5332 279 0 0 0 chr2 3497436 3497467 -249759116 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8176 200 42 55 chr2 3497467 3497665 -249758918 + L1MA4 LINE L1 2233 2432 -5133 1604 188 3 20 chr2 3497665 3497958 -249758625 + AluJb SINE Alu 1 288 -24 8176 200 42 55 chr2 3497958 3499134 -249757449 + L1MA4 LINE L1 2432 4205 -3360 1922 189 83 8 chr2 3499136 3499532 -249757051 + MSTB LTR MaLR 1 426 0 6981 214 49 5 chr2 3499534 3501109 -249755474 + MSTB-int LTR MaLR 3 1646 -5 645 200 0 0 chr2 3501111 3501236 -249755347 + MSTA LTR MaLR 1 125 -301 1593 102 159 8 chr2 3501240 3501581 -249755002 + LTR7 LTR ERV1 1 450 0 1099 175 123 26 chr2 3501581 3501844 -249754739 + MSTA LTR MaLR 140 428 0 924 198 18 0 chr2 3501844 3502061 -249754522 + L1MA4 LINE L1 4203 4423 -3142 1423 176 56 10 chr2 3502061 3502367 -249754216 - THE1C LTR MaLR 0 375 56 260 214 29 14 chr2 3502402 3502472 -249754111 - THE1C LTR MaLR -357 71 1 10527 179 25 27 chr2 3502475 3505232 -249751351 + L1MA4 LINE L1 4422 7186 -533 2378 81 0 7 chr2 3505232 3505541 -249751042 + AluY SINE Alu 2 308 -3 10527 179 25 27 chr2 3505541 3505938 -249750645 + L1MA4 LINE L1 7186 7561 -158 1062 104 31 0 chr2 3505938 3506101 -249750482 + L1PA10 LINE L1 5999 6166 -2 10527 179 25 27 chr2 3506101 3506236 -249750347 + L1MA4 LINE L1 7561 7695 -24 33 25 0 0 chr2 3506239 3506279 -249750304 + AT_rich Low_complexity Low_complexity 1 40 0 900 268 93 55 chr2 3506412 3507250 -249749333 + L1ME3 LINE L1 5351 6229 -2 29 28 0 0 chr2 3507503 3507539 -249749044 + AT_rich Low_complexity Low_complexity 1 36 0 2734 132 144 33 chr2 3507709 3508249 -249748334 - MER4A LTR ERV1 0 600 1 273 173 73 100 chr2 3508439 3508549 -249748034 + MLT1F LTR MaLR 3 109 -433 43 76 0 0 chr2 3508723 3508815 -249747768 + AT_rich Low_complexity Low_complexity 1 92 0 2392 100 0 0 chr2 3508881 3509182 -249747401 - AluSx SINE Alu -11 301 1 185 344 11 44 chr2 3511130 3511220 -249745363 + L2 LINE L2 3186 3272 0 21 82 0 0 chr2 3511401 3511450 -249745133 + AT_rich Low_complexity Low_complexity 1 49 0 2605 205 8 2 chr2 3511450 3512045 -249744538 - L1P LINE L1 -858 5288 4698 4585 152 19 14 chr2 3512048 3512878 -249743705 + L1PA16 LINE L1 5326 6159 -7 22 0 0 0 chr2 3512882 3512904 -249743679 + AT_rich Low_complexity Low_complexity 1 22 0 1874 143 49 0 chr2 3513056 3513343 -249743240 - AluSx SINE Alu -11 301 1 1088 170 50 14 chr2 3513390 3513608 -249742975 + MER101B LTR ERV1 1 226 -344 232 208 0 69 chr2 3513807 3513879 -249742704 + MER101B LTR ERV1 471 537 -33 1278 214 25 4 chr2 3514555 3514835 -249741748 + MER101B-int LTR ERV1 1 286 -6045 888 157 6 18 chr2 3514835 3515001 -249741582 + THE1C LTR MaLR 208 371 -4 6541 158 60 10 chr2 3515004 3516488 -249740095 + THE1C-int LTR MaLR 3 1580 0 1608 166 39 65 chr2 3516488 3516873 -249739710 + THE1C LTR MaLR 1 375 0 484 145 0 0 chr2 3516873 3516949 -249739634 - HSMAR2 DNA Mariner -582 720 645 1621 198 78 16 chr2 3516991 3517374 -249739209 - MLT2C2 LTR ERVL -57 407 1 189 196 0 0 chr2 3517526 3517572 -249739011 + (TGGA)n Simple_repeat Simple_repeat 3 48 0 216 182 0 0 chr2 3517577 3517621 -249738962 + GA-rich Low_complexity Low_complexity 1 44 0 25 75 0 0 chr2 3517825 3517878 -249738705 + AT_rich Low_complexity Low_complexity 1 53 0 1541 158 55 7 chr2 3518089 3518361 -249738222 - LTR32 LTR ERVL -166 305 21 1324 287 100 22 chr2 3518486 3518988 -249737595 - MLT1F LTR MaLR -1 541 1 320 333 60 20 chr2 3520638 3520788 -249735795 + MIR SINE MIR 19 174 -88 31 26 0 0 chr2 3521533 3521571 -249735012 + AT_rich Low_complexity Low_complexity 1 38 0 11966 217 71 27 chr2 3522034 3522785 -249733798 + L1MA8 LINE L1 1061 1778 -5473 2291 110 3 0 chr2 3522785 3523094 -249733489 + AluSg SINE Alu 1 310 0 11966 217 71 27 chr2 3523094 3524328 -249732255 + L1MA8 LINE L1 1778 2957 -4294 297 0 0 0 chr2 3524328 3524361 -249732222 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1543 189 11 25 chr2 3524369 3524654 -249731929 - AluJo SINE Alu -31 281 1 11966 217 71 27 chr2 3524654 3525696 -249730887 + L1MA8 LINE L1 2963 3959 -3292 231 36 0 0 chr2 3525696 3525724 -249730859 + (TG)n Simple_repeat Simple_repeat 2 29 0 11966 217 71 27 chr2 3525724 3526228 -249730355 + L1MA8 LINE L1 3959 4440 -2811 387 0 0 0 chr2 3526228 3526271 -249730312 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2153 101 7 3 chr2 3526273 3526560 -249730023 - AluSx SINE Alu -24 288 1 11966 217 71 27 chr2 3526560 3529238 -249727345 + L1MA8 LINE L1 4440 7245 -6 477 288 22 84 chr2 3530798 3531024 -249725559 - MIR SINE MIR -21 241 30 27 81 0 0 chr2 3532060 3532122 -249724461 + AT_rich Low_complexity Low_complexity 1 62 0 286 292 15 8 chr2 3532872 3533002 -249723581 + (TA)n Simple_repeat Simple_repeat 2 132 0 255 338 23 15 chr2 3533148 3533281 -249723302 - MIR SINE MIR -108 154 21 222 303 118 17 chr2 3533375 3533494 -249723089 - MIR SINE MIR -57 151 21 231 120 101 38 chr2 3534458 3534616 -249721967 + (TATAA)n Simple_repeat Simple_repeat 5 172 0 208 167 42 24 chr2 3534619 3534787 -249721796 + (TTATA)n Simple_repeat Simple_repeat 4 174 0 22 70 0 0 chr2 3534789 3534832 -249721751 + AT_rich Low_complexity Low_complexity 1 43 0 246 174 33 16 chr2 3534893 3535014 -249721569 + (TA)n Simple_repeat Simple_repeat 1 123 0 23 33 0 0 chr2 3535019 3535049 -249721534 + AT_rich Low_complexity Low_complexity 1 30 0 218 152 53 20 chr2 3535061 3535212 -249721371 + (TTATA)n Simple_repeat Simple_repeat 4 159 0 575 171 0 0 chr2 3535233 3535344 -249721239 - L1MA4 LINE L1 -18 6282 6172 573 257 145 55 chr2 3535360 3536112 -249720471 + Charlie2 DNA MER1_type 1791 2610 -252 2269 86 0 3 chr2 3536198 3536489 -249720094 - AluSx SINE Alu -22 290 1 491 210 54 24 chr2 3536489 3536694 -249719889 + Charlie2 DNA MER1_type 2601 2811 -51 302 220 18 28 chr2 3537530 3537639 -249718944 + L1MA9 LINE L1 5983 6090 -222 21 71 0 0 chr2 3537736 3537778 -249718805 + AT_rich Low_complexity Low_complexity 1 42 0 334 297 16 16 chr2 3537872 3538054 -249718529 + HAL1 LINE L1 2044 2225 -282 735 176 0 0 chr2 3538171 3538296 -249718287 - AluJb SINE Alu -16 296 172 183 167 0 0 chr2 3538431 3538473 -249718110 + CT-rich Low_complexity Low_complexity 2 43 0 2417 88 0 0 chr2 3540012 3540317 -249716266 + AluSc SINE Alu 1 305 -4 308 260 20 103 chr2 3540430 3540576 -249716007 + L2 LINE L2 3180 3313 0 27 81 0 0 chr2 3540851 3540913 -249715670 + AT_rich Low_complexity Low_complexity 1 62 0 219 324 0 14 chr2 3540975 3541049 -249715534 + T-rich Low_complexity Low_complexity 5 77 0 2073 129 3 22 chr2 3541271 3541589 -249714994 - AluSx SINE Alu 0 312 1 2295 127 62 3 chr2 3541792 3542178 -249714405 + MLT2A2 LTR ERVL 1 409 -44 763 98 14 43 chr2 3542182 3542554 -249714029 + (TA)n Simple_repeat Simple_repeat 1 361 0 384 73 0 0 chr2 3542554 3542609 -249713974 + MLT2A2 LTR ERVL 399 453 0 1209 69 0 0 chr2 3542703 3542847 -249713736 - AluSp/q SINE Alu -9 304 161 437 135 0 0 chr2 3544290 3544364 -249712219 - L1MA7 LINE L1 0 6291 6218 1143 143 63 68 chr2 3544364 3544616 -249711967 + L1MA8 LINE L1 5619 5869 -422 198 231 0 0 chr2 3545788 3545827 -249710756 - MIR SINE MIR -107 155 117 1716 157 165 11 chr2 3546166 3546536 -249710047 - MSTA LTR MaLR -1 427 1 352 245 59 10 chr2 3549598 3549700 -249706883 - LTR40a LTR ERVL -105 414 308 361 212 186 17 chr2 3549892 3550010 -249706573 - LTR40a LTR ERVL -381 138 1 3870 204 70 7 chr2 3551096 3552073 -249704510 + L1PBa LINE L1 6 1043 -5820 402 180 50 0 chr2 3552069 3552218 -249704365 - L1PBa LINE L1 -5469 1394 1093 * 25 75 0 0 chr2 3552891 3552944 -249703639 + AT_rich Low_complexity Low_complexity 1 53 0 241 255 78 50 chr2 3553433 3553574 -249703009 + L1ME3A LINE L1 5798 5942 -228 1924 154 36 39 chr2 3554484 3554847 -249701736 + THE1B LTR MaLR 1 362 -2 765 203 20 11 chr2 3554883 3555135 -249701448 - MLT1B LTR MaLR -60 330 5 2217 78 0 0 chr2 3557990 3558319 -249698264 + AluY SINE Alu 1 329 0 206 366 41 24 chr2 3560664 3560787 -249695796 - MIR SINE MIR -118 144 20 819 307 3 27 chr2 3561216 3561545 -249695038 + L1MDa LINE L1 63 383 -6157 2539 204 76 39 chr2 3561605 3562482 -249694101 + L1MDa LINE L1 1613 2522 -4018 2557 166 144 11 chr2 3563279 3563835 -249692748 - L1PA16 LINE L1 -2 6164 5535 3390 29 0 0 chr2 3563939 3564353 -249692230 - L1PA5 LINE L1 -130 6024 5611 * 4307 220 38 36 chr2 3564349 3565570 -249691013 - L1PA16 LINE L1 -800 5346 4124 350 146 31 52 chr2 3565591 3565687 -249690896 + MLT1K LTR MaLR 491 584 -4 2351 105 13 0 chr2 3567436 3567741 -249688842 - AluSx SINE Alu -3 309 1 198 0 0 0 chr2 3568050 3568072 -249688511 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 245 330 52 10 chr2 3568824 3568921 -249687662 - L2 LINE L2 0 3272 3172 1022 69 0 7 chr2 3569070 3569215 -249687368 - L1P LINE L1 -3792 2354 2211 5067 41 3 3 chr2 3569215 3569820 -249686763 + L1PA5 LINE L1 5539 6153 -1 321 109 0 0 chr2 3570403 3570458 -249686125 + (A)n Simple_repeat Simple_repeat 1 55 0 356 203 80 129 chr2 3570462 3570625 -249685958 + L2 LINE L2 3159 3313 0 562 262 47 58 chr2 3570628 3570800 -249685783 - MIR SINE MIR -66 196 27 2302 99 0 40 chr2 3572851 3573174 -249683409 - AluSq SINE Alu -3 310 1 2118 137 45 31 chr2 3575539 3575719 -249680864 - THE1B LTR MaLR 0 364 188 2252 78 41 0 chr2 3575719 3576014 -249680569 - AluY SINE Alu -4 307 1 2118 137 45 31 chr2 3576014 3576192 -249680391 - THE1B LTR MaLR -176 188 1 842 141 88 0 chr2 3576212 3576382 -249680201 - L1MB3 LINE L1 -1 6182 5998 185 116 0 47 chr2 3576591 3576634 -249679949 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr2 3576848 3576878 -249679705 + AT_rich Low_complexity Low_complexity 1 30 0 1103 279 42 5 chr2 3577212 3577639 -249678944 + L1MC1 LINE L1 3353 3795 -2351 1954 170 56 33 chr2 3577639 3578166 -249678417 - MLT2A2 LTR ERVL 0 554 1 1594 94 0 31 chr2 3578166 3578420 -249678163 - HERVL-A2 LTR ERVL 0 5654 5409 3428 133 68 22 chr2 3578420 3579005 -249677578 + LTR9 LTR ERV1 1 612 0 26621 171 41 46 chr2 3579026 3585987 -249670596 + HUERS-P3b LTR ERV1 22 6947 -471 800 160 11 11 chr2 3585991 3586166 -249670417 + HUERS-P3 LTR ERV1 3949 4123 -3693 540 194 8 15 chr2 3586157 3586291 -249670292 + HUERS-P3 LTR ERV1 2433 2565 -2450 * 894 111 62 0 chr2 3586445 3586589 -249669994 + HUERS-P3 LTR ERV1 8720 8872 -47 1828 166 45 24 chr2 3586589 3587056 -249669527 - MLT2A2 LTR ERVL -83 461 1 3981 236 28 21 chr2 3587061 3588345 -249668238 + L1MC1 LINE L1 3796 5088 -1058 262 270 20 30 chr2 3588363 3588463 -249668120 + MIR SINE MIR 139 237 -25 4372 171 47 39 chr2 3588487 3589663 -249666920 + L1MC1 LINE L1 5125 6310 -23 34 72 0 0 chr2 3589779 3589848 -249666735 + AT_rich Low_complexity Low_complexity 1 69 0 215 198 129 52 chr2 3589901 3589950 -249666633 - MIR SINE MIR -17 245 201 1713 178 22 73 chr2 3589950 3590361 -249666222 - MLT1B LTR MaLR 0 390 1 215 198 129 52 chr2 3590361 3590427 -249666156 - MIR SINE MIR -61 201 121 219 125 0 0 chr2 3590558 3590598 -249665985 + (CA)n Simple_repeat Simple_repeat 2 41 0 215 244 0 0 chr2 3590802 3590843 -249665740 - MER5B DNA MER1_type -132 46 6 234 0 0 0 chr2 3591440 3591466 -249665117 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 41026 34 21 2 chr2 3591466 3597491 -249659092 - L1PA3 LINE L1 -10 6145 1 198 243 229 0 chr2 3597805 3597875 -249658708 - MIR SINE MIR -6 256 171 716 321 111 14 chr2 3598741 3599099 -249657484 - L2 LINE L2 -318 2995 2606 340 191 24 0 chr2 3599475 3599559 -249657024 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 673 298 108 20 chr2 3599658 3600058 -249656525 - L3 LINE CR1 -32 1545 1111 583 300 82 8 chr2 3600136 3600379 -249656204 - L2 LINE L2 -2830 484 224 297 284 39 39 chr2 3600379 3600534 -249656049 + LTR33 LTR ERVL 345 499 -22 192 259 107 71 chr2 3600763 3600875 -249655708 + L3 LINE CR1 345 460 -1117 41 21 0 0 chr2 3601251 3601299 -249655284 + AT_rich Low_complexity Low_complexity 1 48 0 276 379 73 10 chr2 3601578 3601784 -249654799 - L2 LINE L2 -721 2593 2375 358 266 32 96 chr2 3602290 3602478 -249654105 + MIR SINE MIR 35 210 -52 681 13 0 0 chr2 3603181 3603259 -249653324 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 274 316 128 15 chr2 3604403 3604599 -249651984 + L1ME1 LINE L1 29 246 -6613 944 252 53 55 chr2 3604846 3605602 -249650981 + L1ME1 LINE L1 1215 1955 -4900 4455 252 105 52 chr2 3605616 3607053 -249649530 + L1ME1 LINE L1 2069 3428 -3549 2784 19 0 0 chr2 3607053 3607365 -249649218 + AluYb8 SINE Alu 1 312 -6 4455 252 105 52 chr2 3607365 3607466 -249649117 + L1ME1 LINE L1 3428 3522 -3455 2836 13 0 0 chr2 3607466 3607777 -249648806 + AluYa5 SINE Alu 1 311 0 4455 252 105 52 chr2 3607777 3608608 -249647975 + L1ME1 LINE L1 3522 4307 -2670 304 18 196 0 chr2 3608608 3608664 -249647919 - MADE1 DNA Mariner 0 80 14 4455 252 105 52 chr2 3608664 3608695 -249647888 + L1ME1 LINE L1 4307 4335 -2642 309 64 21 0 chr2 3608695 3608742 -249647841 + MADE1 DNA Mariner 31 78 -2 4455 252 105 52 chr2 3608742 3610599 -249645984 + L1ME1 LINE L1 4335 6827 -150 359 150 25 12 chr2 3610602 3610682 -249645901 + L1MB8 LINE L1 6097 6177 -1 3202 31 3 5 chr2 3610683 3611073 -249645510 + L1PA4 LINE L1 5766 6154 -1 197 339 0 0 chr2 3611186 3611242 -249645341 + MIR SINE MIR 85 140 -68 199 242 0 121 chr2 3612054 3612145 -249644438 + MIR SINE MIR 88 167 -95 305 276 48 129 chr2 3612254 3612758 -249643825 - L2 LINE L2 0 3272 2810 274 151 57 0 chr2 3613128 3613181 -249643402 - L2 LINE L2 0 3272 3217 249 191 154 29 chr2 3613430 3613566 -249643017 - L1ME4a LINE L1 -8 6113 5961 310 327 0 19 chr2 3613816 3613920 -249642663 - MIR SINE MIR -44 218 117 379 287 130 28 chr2 3613942 3614158 -249642425 - MIR SINE MIR -5 257 20 630 241 65 12 chr2 3615752 3615922 -249640661 - MER5A DNA MER1_type 0 189 11 2004 146 0 0 chr2 3615937 3616224 -249640359 - AluSx SINE Alu -25 287 1 1454 216 58 50 chr2 3616281 3616643 -249639940 - MLT1A1 LTR MaLR 0 365 1 280 292 20 119 chr2 3616914 3617116 -249639467 - MIR SINE MIR -79 183 2 191 143 20 51 chr2 3617156 3617254 -249639329 + (TA)n Simple_repeat Simple_repeat 1 95 0 208 277 0 0 chr2 3617321 3617368 -249639215 + L2 LINE L2 3200 3246 -26 181 286 208 31 chr2 3617366 3617558 -249639025 - L2 LINE L2 -2 3311 3086 * 734 197 48 69 chr2 3621105 3621293 -249635290 - MER20 DNA MER1_type 0 219 36 231 301 103 15 chr2 3621716 3621852 -249634731 - MLT1J2 LTR MaLR -20 430 283 24 0 0 0 chr2 3622036 3622060 -249634523 + AT_rich Low_complexity Low_complexity 1 24 0 2036 222 14 30 chr2 3622514 3623023 -249633560 - MLT1D LTR MaLR 0 505 5 1261 256 94 58 chr2 3623448 3624872 -249631711 + L1ME LINE L1 323 1813 -4448 321 250 100 17 chr2 3624870 3624990 -249631593 + L1M4 LINE L1 4119 4248 -1898 * 255 183 92 0 chr2 3625789 3625909 -249630674 + L1M4 LINE L1 4304 4434 -1712 555 263 98 44 chr2 3625915 3626231 -249630352 + L1ME LINE L1 1844 2176 -4085 22 0 0 0 chr2 3626973 3626995 -249629588 + AT_rich Low_complexity Low_complexity 1 22 0 878 286 119 11 chr2 3627867 3628244 -249628339 + LTR16C LTR ERVL 74 491 0 1815 254 106 89 chr2 3628385 3629544 -249627039 - MER69B DNA AcHobo -40 1186 8 230 200 0 33 chr2 3630051 3630111 -249626472 + L1MC4 LINE L1 6646 6703 -1339 593 88 0 0 chr2 3631489 3631569 -249625014 - MADE1 DNA Mariner 0 80 1 214 403 8 8 chr2 3632622 3632746 -249623837 - MIR SINE MIR -114 148 25 196 269 156 54 chr2 3633208 3633394 -249623189 + MIR SINE MIR 32 236 -26 287 340 47 0 chr2 3634416 3634522 -249622061 + MIR SINE MIR 31 141 -67 199 154 19 19 chr2 3634614 3634666 -249621917 + (TTA)n Simple_repeat Simple_repeat 3 54 0 219 277 91 130 chr2 3635301 3635709 -249620874 - L3 LINE CR1 -103 1474 1083 784 344 61 44 chr2 3636711 3637327 -249619256 + L1MEc LINE L1 802 1435 -4961 2421 117 17 6 chr2 3637327 3637687 -249618896 + THE1B LTR MaLR 1 364 0 784 344 61 44 chr2 3637687 3637825 -249618758 + L1MEc LINE L1 1435 1569 -4827 357 64 0 0 chr2 3637825 3637872 -249618711 - L1ME LINE L1 -477 5689 5643 1978 114 92 33 chr2 3637872 3638232 -249618351 + MSTA LTR MaLR 1 381 -47 337 219 27 0 chr2 3638269 3638342 -249618241 - L1ME LINE L1 -519 5647 5573 * 1142 258 35 29 chr2 3638336 3638712 -249617871 + L1ME3A LINE L1 5596 5973 -197 189 260 31 94 chr2 3639330 3639426 -249617157 + L2 LINE L2 2941 3030 -242 277 260 85 8 chr2 3641376 3641495 -249615088 - MIR SINE MIR -68 140 57 21 0 0 0 chr2 3641645 3641666 -249614917 + AT_rich Low_complexity Low_complexity 1 21 0 198 301 14 27 chr2 3642142 3642215 -249614368 + MIR SINE MIR 70 141 -121 237 246 79 44 chr2 3642258 3642372 -249614211 + MIR SINE MIR 140 257 -5 1902 157 10 3 chr2 3643686 3643992 -249612591 + AluSx SINE Alu 1 308 -4 396 283 83 21 chr2 3644159 3644304 -249612279 - MIR SINE MIR -37 225 72 907 185 67 6 chr2 3644978 3645156 -249611427 + MER5A DNA MER1_type 1 189 0 198 355 12 70 chr2 3645375 3645547 -249611036 + L2 LINE L2 2929 3090 -182 5968 177 32 37 chr2 3646156 3647299 -249609284 + L1MB1 LINE L1 3928 5062 -1106 2436 86 0 0 chr2 3647299 3647600 -249608983 - AluY SINE Alu -10 301 1 5968 177 32 37 chr2 3647600 3648622 -249607961 + L1MB1 LINE L1 5062 6087 -81 1562 206 107 28 chr2 3648629 3648932 -249607651 - MER70A LTR ERVL 0 472 130 1977 119 88 23 chr2 3648932 3649284 -249607299 + THE1C LTR MaLR 1 375 0 1562 206 107 28 chr2 3649284 3649373 -249607210 - MER70A LTR ERVL -342 130 49 1815 275 75 33 chr2 3649406 3650342 -249606241 + L1ME3A LINE L1 5188 6160 -10 200 139 13 114 chr2 3651065 3651144 -249605439 + T-rich Low_complexity Low_complexity 3 73 0 594 244 53 22 chr2 3651427 3651652 -249604931 - L1M4 LINE L1 -1498 4648 4417 2435 249 62 32 chr2 3651681 3652758 -249603825 + L1M4 LINE L1 4007 5115 -1031 1389 243 144 68 chr2 3653471 3653593 -249602990 - MLT1F1 LTR MaLR 0 567 456 2739 168 10 12 chr2 3653593 3654080 -249602503 + MER66B LTR ERV1 1 486 0 1389 243 144 68 chr2 3654080 3654484 -249602099 - MLT1F1 LTR MaLR -111 456 1 437 256 173 7 chr2 3654484 3654686 -249601897 + LTR50 LTR ERVL 272 590 -205 216 86 0 0 chr2 3654726 3654761 -249601822 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1144 90 13 0 chr2 3654762 3654918 -249601665 - LTR19A LTR ERV1 -41 445 288 566 250 114 5 chr2 3654921 3655141 -249601442 + LTR50 LTR ERVL 552 795 0 533 191 133 0 chr2 3656425 3656530 -249600053 + MLT1A2 LTR MaLR 1 119 -255 2134 96 4 0 chr2 3656681 3656953 -249599630 + AluY SINE Alu 26 298 -13 820 221 16 5 chr2 3656977 3657167 -249599416 + MLT1A2 LTR MaLR 181 372 -2 304 29 0 0 chr2 3657889 3657924 -249598659 - U2 snRNA snRNA -153 35 1 280 277 193 0 chr2 3657959 3658078 -249598505 - MIR SINE MIR -35 227 86 180 0 0 0 chr2 3658297 3658317 -249598266 + (A)n Simple_repeat Simple_repeat 1 20 0 209 268 24 37 chr2 3659642 3659724 -249596859 + L2 LINE L2 1918 1998 -1316 469 386 58 11 chr2 3659770 3660203 -249596380 + L2 LINE L2 723 1175 -2139 32 43 0 0 chr2 3660338 3660384 -249596199 + AT_rich Low_complexity Low_complexity 1 46 0 294 274 129 8 chr2 3661078 3661202 -249595381 - MIR3 SINE MIR -39 169 31 1429 181 24 38 chr2 3661866 3662158 -249594425 - AluJb SINE Alu -19 293 6 362 251 6 0 chr2 3662935 3663114 -249593469 + GA-rich Low_complexity Low_complexity 1 180 0 309 323 119 27 chr2 3663802 3664096 -249592487 - L1 LINE L1 -1318 4828 4508 21 36 0 0 chr2 3664140 3664168 -249592415 + AT_rich Low_complexity Low_complexity 1 28 0 596 294 110 30 chr2 3665722 3666157 -249590426 + L2 LINE L2 2434 2903 -411 478 321 67 30 chr2 3666164 3666432 -249590151 + HAL1 LINE L1 235 512 -1995 1217 134 19 14 chr2 3666433 3666649 -249589934 + THE1C LTR MaLR 159 375 0 10074 121 32 7 chr2 3666649 3668190 -249588393 + THE1C-int LTR MaLR 1 1580 0 2554 120 3 3 chr2 3668190 3668565 -249588018 + THE1C LTR MaLR 1 375 0 1243 246 54 31 chr2 3668616 3668965 -249587618 - MLT1A2 LTR MaLR 0 374 18 225 277 155 26 chr2 3668980 3669135 -249587448 + HAL1 LINE L1 2333 2507 0 189 325 45 57 chr2 3669250 3669407 -249587176 + L3 LINE CR1 900 1054 -523 314 255 113 19 chr2 3669456 3669562 -249587021 + MER63A DNA MER1_type 92 207 -3 183 129 0 0 chr2 3669871 3669902 -249586681 + (CA)n Simple_repeat Simple_repeat 2 32 0 182 387 84 0 chr2 3670169 3670288 -249586295 + L3 LINE CR1 1348 1476 -101 434 209 62 16 chr2 3671091 3671170 -249585413 + MLT1C LTR MaLR 1 90 -377 1253 191 38 107 chr2 3671170 3671562 -249585021 - MLT1A1 LTR MaLR 0 365 1 434 209 62 16 chr2 3671562 3671611 -249584972 + MLT1C LTR MaLR 90 135 -332 1047 197 33 44 chr2 3671627 3671779 -249584804 + MLT1C LTR MaLR 194 343 -124 1970 128 60 28 chr2 3671779 3672132 -249584451 - THE1B LTR MaLR 0 364 1 1047 197 33 44 chr2 3672132 3672253 -249584330 + MLT1C LTR MaLR 343 464 -3 368 325 145 21 chr2 3672253 3672721 -249583862 - L1 LINE L1 -1309 4837 4312 321 314 83 70 chr2 3672767 3673153 -249583430 - L1 LINE L1 -1906 4240 3850 1906 47 0 0 chr2 3673244 3673477 -249583106 + L1PA7 LINE L1 5919 6151 -3 2145 131 0 0 chr2 3673770 3674061 -249582522 + AluSx SINE Alu 1 291 -21 198 0 0 0 chr2 3674786 3674808 -249581775 + (TCTCC)n Simple_repeat Simple_repeat 5 26 0 197 331 0 66 chr2 3674811 3674932 -249581651 + L2 LINE L2 3013 3125 -188 1802 158 3 34 chr2 3674970 3675292 -249581291 + AluJb SINE Alu 1 312 0 180 0 0 0 chr2 3675829 3675849 -249580734 + (T)n Simple_repeat Simple_repeat 1 20 0 202 204 0 23 chr2 3676558 3676602 -249579981 + L2 LINE L2 3267 3309 -4 790 11 0 0 chr2 3676764 3676856 -249579727 - L1PA5 LINE L1 -270 5884 5793 1804 27 5 0 chr2 3676856 3677073 -249579510 + L1PA4 LINE L1 5935 6154 -1 681 216 14 56 chr2 3677327 3677540 -249579043 + MER3 DNA MER1_type 2 205 -4 2318 102 6 10 chr2 3677971 3678285 -249578298 + AluSq SINE Alu 1 313 0 26 0 0 0 chr2 3678361 3678387 -249578196 + AT_rich Low_complexity Low_complexity 1 26 0 768 213 26 31 chr2 3680386 3680633 -249575950 + L1MA9 LINE L1 6042 6285 -6 725 86 48 0 chr2 3681131 3681236 -249575347 - AluSg/x SINE Alu -12 298 189 193 349 77 31 chr2 3681284 3681479 -249575104 + L2 LINE L2 2565 2768 -546 2345 84 7 0 chr2 3681480 3681778 -249574805 - AluSg SINE Alu -5 305 6 21 71 0 0 chr2 3682182 3682224 -249574359 + AT_rich Low_complexity Low_complexity 1 42 0 223 304 72 0 chr2 3682507 3682576 -249574007 - MIR SINE MIR -91 171 98 338 293 136 0 chr2 3683177 3683317 -249573266 + MIR SINE MIR 103 261 -1 1657 238 41 19 chr2 3684027 3684511 -249572072 + MLT1D LTR MaLR 3 497 -8 2522 103 12 18 chr2 3684520 3684919 -249571664 + THE1B-int LTR MaLR 1184 1580 0 1945 136 14 33 chr2 3684919 3685280 -249571303 + THE1B LTR MaLR 1 354 -10 1973 266 35 38 chr2 3685286 3686124 -249570459 + MLT1D-int LTR MaLR 3 837 -534 296 229 84 0 chr2 3686136 3686219 -249570364 + L1M4 LINE L1 2638 2727 -3419 709 273 41 9 chr2 3686227 3686568 -249570015 - L1MEc LINE L1 -3558 2657 2306 * 737 247 13 31 chr2 3686561 3686788 -249569795 - L1MEc LINE L1 -6129 267 45 * 939 276 121 27 chr2 3686786 3687265 -249569318 + L1ME1 LINE L1 5593 6116 -50 1928 152 10 3 chr2 3687506 3687802 -249568781 + AluSx SINE Alu 1 298 -14 669 136 149 19 chr2 3687855 3688009 -249568574 - MSTA LTR MaLR -31 397 224 230 276 201 22 chr2 3688069 3688203 -249568380 - MIR SINE MIR -34 228 71 245 202 44 79 chr2 3688659 3688773 -249567810 + L1ME4a LINE L1 5550 5659 -462 5180 50 8 2 chr2 3688795 3689426 -249567157 + L1PA8 LINE L1 5520 6157 -15 279 0 0 0 chr2 3689426 3689457 -249567126 + (TA)n Simple_repeat Simple_repeat 2 32 0 5180 50 8 2 chr2 3689457 3689469 -249567114 + L1PA8 LINE L1 6157 6167 -5 218 357 48 0 chr2 3689591 3689675 -249566908 + L2 LINE L2 3091 3178 -94 2433 102 120 5 chr2 3690439 3690822 -249565761 + MSTA LTR MaLR 1 427 -1 2255 112 0 0 chr2 3690914 3691208 -249565375 - AluSg1 SINE Alu -15 294 1 304 256 0 26 chr2 3692658 3692736 -249563847 - MIR SINE MIR -119 143 68 452 315 164 6 chr2 3693115 3693439 -249563144 + L1ME4a LINE L1 5740 6114 -7 302 289 29 0 chr2 3693468 3693572 -249563011 - HAL1b LINE L1 -1 1347 1241 1902 158 6 16 chr2 3693577 3693888 -249562695 + AluJb SINE Alu 2 309 -3 346 287 42 75 chr2 3694310 3694575 -249562008 - L1M4 LINE L1 -2346 3800 3545 364 118 61 19 chr2 3694786 3695006 -249561577 + (TCTA)n Simple_repeat Simple_repeat 1 229 0 187 250 0 0 chr2 3695254 3695294 -249561289 + MER5A DNA MER1_type 128 167 -22 1238 145 108 0 chr2 3696264 3696505 -249560078 - L1MC1 LINE L1 -2 6331 6065 1061 268 34 54 chr2 3697329 3697863 -249558720 - MER119 DNA MER1_type -10 573 51 27 0 0 0 chr2 3697884 3697911 -249558672 + AT_rich Low_complexity Low_complexity 1 27 0 1653 163 73 12 chr2 3700283 3700626 -249555957 + MLT1A1 LTR MaLR 2 365 0 413 383 44 0 chr2 3701385 3701636 -249554947 + HERV16 LTR ERVL 1317 1578 -3418 899 317 37 24 chr2 3701667 3702603 -249553980 + HERV16 LTR ERVL 1674 2649 -2347 432 299 121 17 chr2 3702991 3703289 -249553294 - LTR16A LTR ERVL -106 344 16 341 340 95 16 chr2 3703638 3704011 -249552572 - ERVL LTR ERVL -528 4957 4674 725 225 31 0 chr2 3704012 3704172 -249552411 + MER45A DNA AcHobo 4 168 -10 2681 71 14 6 chr2 3704795 3705160 -249551423 + L1PB1 LINE L1 5777 6144 -7 46 19 0 0 chr2 3705318 3705371 -249551212 + AT_rich Low_complexity Low_complexity 1 53 0 9412 205 12 4 chr2 3705383 3707520 -249549063 - L1 LINE L1 -1777 5788 3636 5632 66 19 0 chr2 3707515 3708285 -249548298 - L1PA7 LINE L1 -1 6153 5369 * 21495 109 20 22 chr2 3708280 3712416 -249544167 - L1P3 LINE L1 -1892 4569 397 204 67 0 0 chr2 3712416 3712446 -249544137 + (CAA)n Simple_repeat Simple_repeat 2 31 0 21495 109 20 22 chr2 3712446 3712843 -249543740 - L1P3 LINE L1 -6064 397 1 11703 166 25 40 chr2 3712855 3715832 -249540751 - L1 LINE L1 -3938 3627 22 2178 96 6 13 chr2 3717230 3717543 -249539040 - AluY SINE Alu 0 311 1 370 232 111 0 chr2 3717791 3717890 -249538693 - MIR SINE MIR 0 262 153 326 221 15 0 chr2 3718551 3718619 -249537964 + L2 LINE L2 1178 1246 -2068 2093 127 0 3 chr2 3718619 3718919 -249537664 - AluSg SINE Alu -11 299 1 898 234 0 10 chr2 3718929 3719121 -249537462 - L1PB4 LINE L1 -3 6153 5964 830 168 0 0 chr2 3719137 3719256 -249537327 - FLAM_C SINE Alu -19 124 6 623 199 5 1 chr2 3719257 3719379 -249537204 - L1PB4 LINE L1 -194 5960 5835 2279 128 26 64 chr2 3719381 3719881 -249536702 - L1PB4 LINE L1 -422 5734 5254 430 109 0 0 chr2 3719895 3719959 -249536624 + L1 LINE L1 2957 3020 -3126 2140 228 11 17 chr2 3719959 3720490 -249536093 + L1 LINE L1 3327 3854 -2292 1855 300 134 50 chr2 3720492 3721887 -249534696 + L2 LINE L2 1258 2769 -545 242 263 0 84 chr2 3724105 3724200 -249532383 - MER5A DNA MER1_type -48 141 55 3430 57 40 2 chr2 3724825 3725279 -249531304 - L1PA8 LINE L1 -8 6164 5694 187 393 28 9 chr2 3726199 3726306 -249530277 + MER5A DNA MER1_type 2 110 -79 1477 128 30 8 chr2 3727150 3727384 -249529199 - MSTB1 LTR MaLR -1 431 193 23 33 0 0 chr2 3728583 3728613 -249527970 + AT_rich Low_complexity Low_complexity 1 30 0 39 0 0 0 chr2 3728912 3728951 -249527632 + AT_rich Low_complexity Low_complexity 1 39 0 214 290 48 0 chr2 3730782 3730844 -249525739 - MIR SINE MIR -100 162 98 314 250 24 12 chr2 3731020 3731104 -249525479 + L2 LINE L2 3226 3310 -3 287 319 61 52 chr2 3732074 3732303 -249524280 - MLT1K LTR MaLR -18 570 340 1412 123 21 16 chr2 3732841 3733084 -249523499 - L1MA6 LINE L1 -4 6296 6053 391 184 58 29 chr2 3733343 3733517 -249523066 + (CA)n Simple_repeat Simple_repeat 1 179 0 998 311 58 15 chr2 3733997 3734409 -249522174 - L2 LINE L2 -514 2800 2371 23 0 0 0 chr2 3735425 3735448 -249521135 + AT_rich Low_complexity Low_complexity 1 23 0 211 247 86 25 chr2 3735857 3735938 -249520645 + MIR SINE MIR 64 149 -113 496 288 29 62 chr2 3736193 3736467 -249520116 + L2 LINE L2 2200 2464 -850 1527 116 0 22 chr2 3736648 3736872 -249519711 + AluSx SINE Alu 1 219 -93 21 0 0 0 chr2 3738145 3738166 -249518417 + AT_rich Low_complexity Low_complexity 1 21 0 3642 221 20 7 chr2 3738180 3738892 -249517691 - MER44D DNA MER2_type 0 605 13 27 29 0 0 chr2 3739046 3739080 -249517503 + AT_rich Low_complexity Low_complexity 1 34 0 36 40 0 0 chr2 3739159 3739209 -249517374 + AT_rich Low_complexity Low_complexity 1 50 0 1659 256 34 34 chr2 3739238 3740118 -249516465 - L1ME1 LINE L1 -63 6103 4783 725 250 128 78 chr2 3740116 3740501 -249516082 - L1ME1 LINE L1 -1745 4401 3982 * 411 83 0 0 chr2 3740501 3740561 -249516022 + (TG)n Simple_repeat Simple_repeat 1 60 0 725 250 128 78 chr2 3740561 3740691 -249515892 - L1ME1 LINE L1 -2164 3982 3860 1623 228 19 71 chr2 3740691 3741209 -249515374 + MLT1D LTR MaLR 1 491 -14 2446 271 74 13 chr2 3741218 3742427 -249514156 - L1ME1 LINE L1 -2282 3864 2583 1173 257 136 83 chr2 3742771 3743011 -249513572 + MLT1E3 LTR MaLR 4 230 -394 1609 187 10 17 chr2 3743011 3743300 -249513283 + AluJo SINE Alu 1 287 -25 1173 257 136 83 chr2 3743300 3743647 -249512936 + MLT1E3 LTR MaLR 230 622 -2 228 305 32 7 chr2 3743706 3743860 -249512723 + L1M4 LINE L1 4533 4690 -1456 635 261 188 12 chr2 3745998 3746343 -249510240 - LTR50 LTR ERVL 0 795 390 241 238 109 30 chr2 3746346 3746447 -249510136 - LTR50 LTR ERVL -583 212 104 288 0 0 0 chr2 3746685 3746717 -249509866 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 283 313 46 28 chr2 3746939 3747156 -249509427 - LTR33 LTR ERVL 0 521 301 30 45 0 0 chr2 3747946 3747990 -249508593 + AT_rich Low_complexity Low_complexity 1 44 0 344 308 245 9 chr2 3748007 3748338 -249508245 + MLT1I LTR MaLR 1 409 0 2441 78 0 3 chr2 3748719 3749025 -249507558 + AluY SINE Alu 1 305 -6 349 329 83 23 chr2 3749228 3749444 -249507139 + MLT1J LTR MaLR 36 264 -247 183 139 0 0 chr2 3749444 3749480 -249507103 + (A)n Simple_repeat Simple_repeat 1 36 0 594 278 7 0 chr2 3749789 3749933 -249506650 + MIR SINE MIR 67 211 -51 392 386 48 21 chr2 3750208 3750545 -249506038 - L1MC/D LINE L1 -2000 5808 5463 1074 283 28 33 chr2 3750547 3750974 -249505609 + L1MCc LINE L1 14 438 -5985 1911 173 58 26 chr2 3751026 3751513 -249505070 + MLT2A2 LTR ERVL 1 516 -38 450 0 0 0 chr2 3751513 3751563 -249505020 + (TA)n Simple_repeat Simple_repeat 2 51 0 1911 173 58 26 chr2 3751563 3751604 -249504979 + MLT2A2 LTR ERVL 516 554 0 1237 276 115 15 chr2 3751828 3752564 -249504019 + L1MCc LINE L1 935 1747 -4887 368 203 183 110 chr2 3752568 3752814 -249503769 + LTR41 LTR ERVL 3 266 -507 22 0 0 0 chr2 3753152 3753174 -249503409 + AT_rich Low_complexity Low_complexity 1 22 0 729 302 38 21 chr2 3753333 3753621 -249502962 + L1MC4 LINE L1 6717 7009 -1033 307 312 110 41 chr2 3753805 3754031 -249502552 + L1MC4a LINE L1 7177 7495 -419 577 275 54 45 chr2 3754042 3754264 -249502319 - MER58A DNA MER1_type 0 224 1 230 289 0 0 chr2 3754508 3754560 -249502023 + polypurine Low_complexity Low_complexity 3 54 0 334 266 148 0 chr2 3755372 3755500 -249501083 + MIR SINE MIR 104 250 -12 1050 232 84 58 chr2 3755639 3755855 -249500728 - MLT1A2 LTR MaLR -15 359 129 2443 61 0 3 chr2 3755855 3756148 -249500435 + AluY SINE Alu 1 292 -19 1050 232 84 58 chr2 3756148 3756276 -249500307 - MLT1A2 LTR MaLR -245 129 6 546 259 96 93 chr2 3756273 3756796 -249499787 + MLT1L LTR MaLR 27 471 -40 * 224 122 24 0 chr2 3756797 3756838 -249499745 + (TG)n Simple_repeat Simple_repeat 1 42 0 190 358 15 60 chr2 3756978 3757112 -249499471 + L2 LINE L2 2880 3007 -265 329 317 145 6 chr2 3757492 3757836 -249498747 + L2 LINE L2 2547 2938 -376 348 180 16 0 chr2 3758037 3758098 -249498485 + Tigger5 DNA MER2_type 1 62 -2261 * 1073 182 10 10 chr2 3758096 3758299 -249498284 + Tigger5 DNA MER2_type 2062 2264 -59 1105 151 47 24 chr2 3758299 3758511 -249498072 - Tigger1 DNA MER2_type 0 2418 2202 936 138 0 63 chr2 3758492 3758666 -249497917 - Tigger1 DNA MER2_type -2255 163 1 * 374 180 0 0 chr2 3758666 3758727 -249497856 + Tigger5 DNA MER2_type 2263 2323 0 267 316 101 29 chr2 3758765 3758904 -249497679 + L2 LINE L2 3165 3313 0 243 329 0 12 chr2 3759122 3759207 -249497376 - L2 LINE L2 -3 3269 3186 22 35 0 0 chr2 3760388 3760417 -249496166 + AT_rich Low_complexity Low_complexity 1 29 0 233 283 58 80 chr2 3761051 3761189 -249495394 + L2 LINE L2 2619 2753 -561 31 58 0 0 chr2 3761618 3761670 -249494913 + AT_rich Low_complexity Low_complexity 1 52 0 963 151 0 0 chr2 3762151 3762502 -249494081 + (CA)n Simple_repeat Simple_repeat 2 352 0 3306 114 16 0 chr2 3762798 3763305 -249493278 + L1PA13 LINE L1 5634 6148 -15 1845 100 93 4 chr2 3763337 3763637 -249492946 + AluSx SINE Alu 1 312 0 220 273 146 64 chr2 3764289 3764399 -249492184 + L2 LINE L2 3133 3251 -21 24 0 0 0 chr2 3765509 3765533 -249491050 + AT_rich Low_complexity Low_complexity 1 24 0 3364 213 50 3 chr2 3769176 3769870 -249486713 + MER44D DNA MER2_type 1 599 -6 2157 116 0 3 chr2 3769918 3770238 -249486345 + AluSq SINE Alu 1 313 0 230 264 0 11 chr2 3770604 3770695 -249485888 + GA-rich Low_complexity Low_complexity 3 92 0 270 95 0 0 chr2 3771939 3771981 -249484602 + (TG)n Simple_repeat Simple_repeat 1 42 0 842 137 0 0 chr2 3771981 3772105 -249484478 - AluSg/x SINE Alu -33 279 156 751 67 0 29 chr2 3772612 3772716 -249483867 - AluSg1 SINE Alu -208 101 1 234 169 0 84 chr2 3772971 3773042 -249483541 - MLT1H LTR MaLR 0 549 478 693 288 45 0 chr2 3773388 3773586 -249482997 + MIR SINE MIR 56 262 0 209 185 15 0 chr2 3773588 3773653 -249482930 + (CTA)n Simple_repeat Simple_repeat 3 68 0 24 67 0 0 chr2 3773727 3773772 -249482811 + AT_rich Low_complexity Low_complexity 1 45 0 655 182 64 51 chr2 3774074 3774284 -249482299 + MLT1B LTR MaLR 173 390 0 719 230 143 15 chr2 3774475 3774740 -249481843 + MER46C DNA MER2_type 1 299 -39 271 258 44 38 chr2 3775197 3775356 -249481227 - L1MEc LINE L1 -1487 5053 4894 427 79 0 16 chr2 3775372 3775435 -249481148 + MADE1 DNA Mariner 1 62 -18 21 0 0 0 chr2 3775492 3775513 -249481070 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 3775738 3775772 -249480811 + AT_rich Low_complexity Low_complexity 1 34 0 2222 109 3 0 chr2 3775908 3776211 -249480372 - AluSg SINE Alu -6 304 1 1972 151 0 0 chr2 3776217 3776521 -249480062 - AluSx SINE Alu -3 309 6 205 266 0 0 chr2 3776629 3776693 -249479890 + T-rich Low_complexity Low_complexity 1 64 0 668 311 28 21 chr2 3776720 3776983 -249479600 - L1MEc LINE L1 -2329 4211 3943 567 113 0 0 chr2 3776983 3777063 -249479520 + MADE1 DNA Mariner 1 80 0 668 311 28 21 chr2 3777063 3777188 -249479395 - L1MEc LINE L1 -2597 3943 3820 824 187 55 55 chr2 3777288 3777507 -249479076 + MER20 DNA MER1_type 1 219 0 683 260 82 86 chr2 3777521 3777752 -249478831 - L1MEc LINE L1 -2845 3695 3465 3607 146 30 8 chr2 3777752 3778408 -249478175 - L1MA8 LINE L1 0 6291 5621 683 260 82 86 chr2 3778408 3779095 -249477488 - L1MEc LINE L1 -3075 3465 2777 1490 167 53 61 chr2 3779095 3779473 -249477110 - THE1C LTR MaLR 0 375 1 8592 153 18 43 chr2 3779473 3781091 -249475492 - THE1C-int LTR MaLR 0 1580 3 1653 160 60 41 chr2 3781093 3781461 -249475122 - THE1C LTR MaLR 0 375 1 683 260 82 86 chr2 3781461 3781522 -249475061 - L1MEc LINE L1 -3763 2777 2715 1057 259 73 79 chr2 3781644 3783185 -249473398 - L1MEc LINE L1 -3918 2622 1128 214 191 0 0 chr2 3783903 3783945 -249472638 + T-rich Low_complexity Low_complexity 1 42 0 27 29 0 0 chr2 3784069 3784103 -249472480 + AT_rich Low_complexity Low_complexity 1 34 0 273 130 0 0 chr2 3784188 3784234 -249472349 - L1MEc LINE L1 -4897 1645 1600 * 1063 267 18 7 chr2 3784226 3784499 -249472084 - L1M4 LINE L1 -6108 276 1 272 346 0 0 chr2 3785097 3785201 -249471382 + CT-rich Low_complexity Low_complexity 3 106 0 363 108 0 77 chr2 3785986 3786051 -249470532 + MLT2B1 LTR ERVL 7 66 -348 638 191 0 20 chr2 3786193 3786340 -249470243 - L1MD1 LINE L1 0 6242 6099 1537 251 92 11 chr2 3786417 3786852 -249469731 - L1MEc LINE L1 -6068 472 3 22 0 0 0 chr2 3787051 3787073 -249469510 + AT_rich Low_complexity Low_complexity 1 22 0 715 140 0 0 chr2 3787112 3787219 -249469364 - AluSq/x SINE Alu -205 107 1 2306 173 28 16 chr2 3788164 3788591 -249467992 - Tigger2a DNA MER2_type 0 434 3 225 0 0 0 chr2 3789502 3789527 -249467056 + (T)n Simple_repeat Simple_repeat 1 25 0 2209 100 3 7 chr2 3789676 3789977 -249466606 - AluSx SINE Alu -12 300 1 2008 157 0 0 chr2 3790077 3790371 -249466212 + AluSg SINE Alu 1 294 -16 802 317 46 19 chr2 3790712 3791081 -249465502 + MLT1J LTR MaLR 113 491 -20 29 0 0 0 chr2 3792141 3792170 -249464413 + AT_rich Low_complexity Low_complexity 1 29 0 217 211 40 13 chr2 3792388 3792464 -249464119 + (CA)n Simple_repeat Simple_repeat 1 78 0 4134 150 37 6 chr2 3792464 3793185 -249463398 + MER49 LTR ERV1 171 914 -9 289 183 59 6 chr2 3793794 3793963 -249462620 + (TA)n Simple_repeat Simple_repeat 2 179 0 272 126 31 99 chr2 3794007 3794198 -249462385 + (TA)n Simple_repeat Simple_repeat 2 179 0 383 95 14 176 chr2 3794236 3794446 -249462137 + (TA)n Simple_repeat Simple_repeat 2 177 0 208 262 66 16 chr2 3794758 3794819 -249461764 + MIR SINE MIR 127 190 -72 32 43 0 0 chr2 3795154 3795200 -249461383 + AT_rich Low_complexity Low_complexity 1 46 0 266 197 197 70 chr2 3795423 3795456 -249461127 - MIR SINE MIR -10 252 225 928 176 88 123 chr2 3795456 3795831 -249460752 + MLT1A1 LTR MaLR 4 365 0 266 197 197 70 chr2 3795831 3795926 -249460657 - MIR SINE MIR -37 225 105 476 279 86 96 chr2 3795986 3796381 -249460202 - HAL1 LINE L1 -998 1509 1119 204 194 0 0 chr2 3796815 3796851 -249459732 + CT-rich Low_complexity Low_complexity 3 38 0 821 180 16 5 chr2 3796864 3797270 -249459313 + CT-rich Low_complexity Low_complexity 1 410 0 772 151 0 27 chr2 3797293 3797478 -249459105 + CT-rich Low_complexity Low_complexity 1 180 0 273 119 0 0 chr2 3797513 3797555 -249459028 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 * 641 163 0 7 chr2 3797548 3797689 -249458894 + CT-rich Low_complexity Low_complexity 3 142 0 1076 128 0 6 chr2 3797813 3797935 -249458648 + (TTC)n Simple_repeat Simple_repeat 1 300 0 1076 128 0 6 chr2 3797935 3798115 -249458468 + (TTC)n Simple_repeat Simple_repeat 1 179 0 911 171 23 27 chr2 3798327 3798536 -249458047 - L1PA8 LINE L1 -13 6142 5937 1716 154 3 43 chr2 3798536 3798835 -249457748 + Tigger4(Zombi) DNA MER2_type 1215 1501 -1230 4478 59 10 0 chr2 3798835 3799412 -249457171 - L1PA8A LINE L1 -186 5945 5363 442 200 45 18 chr2 3799842 3799952 -249456631 - LTR37B LTR ERV1 -159 309 197 449 326 20 31 chr2 3800444 3800640 -249455943 - MER63A DNA MER1_type -16 194 1 189 302 48 56 chr2 3800749 3800875 -249455708 - MER5A DNA MER1_type -35 154 30 * 235 286 0 0 chr2 3800832 3800888 -249455695 + MER5A DNA MER1_type 128 183 -6 315 71 0 0 chr2 3801351 3801393 -249455190 + (TG)n Simple_repeat Simple_repeat 2 43 0 185 35 69 0 chr2 3802631 3802660 -249453923 + A-rich Low_complexity Low_complexity 2 32 0 480 48 0 0 chr2 3803534 3803597 -249452986 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 71 0 0 chr2 3804485 3804527 -249452056 + AT_rich Low_complexity Low_complexity 1 42 0 2590 27 7 3 chr2 3806309 3806610 -249449973 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 3806666 3806705 -249449878 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 3807245 3807282 -249449301 + AT_rich Low_complexity Low_complexity 1 37 0 1318 192 64 20 chr2 3807980 3808277 -249448306 - AluJb SINE Alu 0 312 3 285 242 34 22 chr2 3808462 3808522 -249448061 + (TA)n Simple_repeat Simple_repeat 1 59 -121 1275 149 10 0 chr2 3808522 3808730 -249447853 + MER6B DNA MER2_type 1 210 0 285 242 34 22 chr2 3808730 3808847 -249447736 + (TA)n Simple_repeat Simple_repeat 59 180 0 276 266 50 65 chr2 3808855 3808994 -249447589 - L1ME1 LINE L1 -102 6064 5928 261 331 87 29 chr2 3808996 3809168 -249447415 + L2 LINE L2 1773 1954 -1360 272 390 89 46 chr2 3809211 3809493 -249447090 + L2 LINE L2 2948 3241 -31 21 36 0 0 chr2 3810057 3810085 -249446498 + AT_rich Low_complexity Low_complexity 1 28 0 1257 230 71 43 chr2 3810920 3811341 -249445242 + MLT1D LTR MaLR 1 433 -72 184 316 51 0 chr2 3811375 3811454 -249445129 + MIR3 SINE MIR 83 165 -43 181 322 17 17 chr2 3811482 3811541 -249445042 - L2 LINE L2 -4 3309 3251 255 79 0 0 chr2 3811861 3811899 -249444684 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr2 3812134 3812159 -249444424 + AT_rich Low_complexity Low_complexity 1 25 0 340 332 118 16 chr2 3812228 3812601 -249443982 + MLT1L LTR MaLR 131 541 -74 1084 269 274 18 chr2 3813081 3813903 -249442680 - L1MC4 LINE L1 -205 7837 6806 378 230 18 9 chr2 3813908 3814021 -249442562 - L1MA4 LINE L1 -209 6091 5978 * 655 249 54 80 chr2 3814013 3814386 -249442197 - L1MC4 LINE L1 -1222 6820 6458 203 286 22 0 chr2 3815271 3815362 -249441221 + (TG)n Simple_repeat Simple_repeat 1 93 0 1001 127 0 6 chr2 3815563 3815625 -249440958 + (GGA)n Simple_repeat Simple_repeat 1 241 0 1001 127 0 6 chr2 3815625 3815806 -249440777 + (GGA)n Simple_repeat Simple_repeat 1 180 0 211 339 97 0 chr2 3816572 3816696 -249439887 - L2 LINE L2 -9 3304 3169 260 26 128 0 chr2 3816817 3816895 -249439688 + (TA)n Simple_repeat Simple_repeat 1 88 0 200 132 0 26 chr2 3817265 3817303 -249439280 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 1873 166 27 48 chr2 3818279 3818839 -249437744 - MLT2A2 LTR ERVL 0 554 1 219 263 100 25 chr2 3818918 3818998 -249437585 - MIR SINE MIR -73 189 104 1462 196 85 24 chr2 3819330 3819671 -249436912 + MLT1A1 LTR MaLR 4 365 0 25 51 0 0 chr2 3820202 3820241 -249436342 + AT_rich Low_complexity Low_complexity 1 39 0 210 319 69 0 chr2 3820920 3820992 -249435591 + L2 LINE L2 2413 2489 -825 241 333 32 51 chr2 3821569 3821725 -249434858 + L2 LINE L2 2686 2838 -476 2220 133 30 25 chr2 3821959 3822321 -249434262 + THE1B LTR MaLR 1 364 0 259 355 44 24 chr2 3823660 3823879 -249432704 - MIR SINE MIR -26 236 17 1749 189 97 8 chr2 3823926 3824317 -249432266 - MSTA LTR MaLR 0 428 3 6613 203 107 15 chr2 3824319 3825831 -249430752 - MSTB-int LTR MaLR 0 1651 1 1949 194 65 5 chr2 3825831 3826233 -249430350 - MSTB LTR MaLR 0 426 1 1033 260 97 26 chr2 3826282 3826779 -249429804 - LTR10B LTR ERV1 0 547 16 2806 98 51 5 chr2 3827315 3827743 -249428840 + MLT2A2 LTR ERVL 1 448 -5 10254 109 4 12 chr2 3827746 3828115 -249428468 + THE1B-int LTR MaLR 5 375 -1205 1804 136 0 0 chr2 3828115 3828366 -249428217 - AluSc SINE Alu -9 300 50 10254 109 4 12 chr2 3828366 3829523 -249427060 + THE1B-int LTR MaLR 375 1519 -61 3097 99 18 14 chr2 3829524 3829966 -249426617 - MLT2A1 LTR ERVL 0 444 1 40172 87 10 2 chr2 3829967 3830400 -249426183 - HERVL-A1 LTR ERVL -1 5653 5225 236 53 26 0 chr2 3830400 3830438 -249426145 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 40172 87 10 2 chr2 3830438 3835614 -249420969 - HERVL-A1 LTR ERVL -429 5225 1 3095 101 9 11 chr2 3835614 3836059 -249420524 - MLT2A1 LTR ERVL 0 444 1 448 77 0 0 chr2 3836059 3836124 -249420459 + THE1B-int LTR MaLR 1516 1580 0 2088 132 51 28 chr2 3836124 3836480 -249420103 + THE1B LTR MaLR 1 364 0 255 287 77 56 chr2 3837407 3837550 -249419033 + MIR SINE MIR 117 262 0 24 67 0 0 chr2 3839142 3839187 -249417396 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 3839469 3839491 -249417092 + AT_rich Low_complexity Low_complexity 1 22 0 578 272 110 0 chr2 3839814 3840068 -249416515 - L1M4 LINE L1 -2804 3342 3061 228 306 52 31 chr2 3840124 3840317 -249416266 - L1M4 LINE L1 -3715 2431 2235 3624 185 13 46 chr2 3840339 3841237 -249415346 - L1MB3 LINE L1 -2 6181 5313 * 3664 218 63 46 chr2 3841236 3842348 -249414235 - L1MC3 LINE L1 -743 5403 5096 1869 179 0 10 chr2 3842348 3842661 -249413922 + AluJb SINE Alu 3 312 0 3664 218 63 46 chr2 3842661 3843463 -249413120 - L1MC3 LINE L1 -1050 5096 4309 1291 232 57 21 chr2 3843475 3843949 -249412634 - L1MC3 LINE L1 -2042 4104 3614 2207 85 4 0 chr2 3844055 3844381 -249412202 + AluY SINE Alu 1 327 0 376 309 49 19 chr2 3844389 3844551 -249412032 + MER5B DNA MER1_type 1 167 -11 2158 176 39 28 chr2 3846735 3847195 -249409388 + MLT1C LTR MaLR 1 465 -2 2345 244 64 26 chr2 3847411 3848280 -249408303 + L1ME2 LINE L1 5254 6155 -9 323 256 57 81 chr2 3848309 3848520 -249408063 + L1MC4 LINE L1 7829 8034 -8 491 231 144 5 chr2 3849391 3849586 -249406997 - L1MA9 LINE L1 -38 6274 6053 234 310 0 0 chr2 3851030 3851101 -249405482 + MLT1J LTR MaLR 229 299 -212 238 234 85 0 chr2 3852026 3852120 -249404463 + LTR33A LTR ERVL 408 509 -14 270 356 34 0 chr2 3853917 3854035 -249402548 + MIR SINE MIR 138 259 -3 1975 121 32 0 chr2 3854070 3854351 -249402232 - AluSc SINE Alu -4 305 16 252 340 19 19 chr2 3855721 3855827 -249400756 - MIR3 SINE MIR -88 120 15 254 364 93 0 chr2 3856082 3856222 -249400361 + MIR SINE MIR 108 260 -2 523 363 28 4 chr2 3856239 3856490 -249400093 - MIR SINE MIR 0 262 6 1547 273 99 56 chr2 3856954 3857813 -249398770 + L2 LINE L2 2153 3036 -277 1418 172 23 15 chr2 3857828 3858090 -249398493 - AluJb SINE Alu -48 264 1 552 238 166 14 chr2 3858294 3858517 -249398066 + MER69 DNA AcHobo 275 531 -695 546 265 99 7 chr2 3858627 3858778 -249397805 - MIR SINE MIR -89 173 9 297 291 72 11 chr2 3858870 3859030 -249397553 - MIR SINE MIR -63 199 32 243 133 0 0 chr2 3859945 3859990 -249396593 + (CAT)n Simple_repeat Simple_repeat 3 47 0 303 330 61 0 chr2 3862944 3863059 -249393524 - L2 LINE L2 -9 3263 3142 1634 136 42 33 chr2 3863970 3864492 -249392091 + MER50 LTR ERV1 1 729 -5 254 255 49 39 chr2 3866706 3866808 -249389775 - MIR SINE MIR -56 206 104 2117 174 58 7 chr2 3866883 3867330 -249389253 + L1MC2 LINE L1 5850 6319 -25 26 50 0 0 chr2 3867668 3867708 -249388875 + AT_rich Low_complexity Low_complexity 1 40 0 479 307 131 27 chr2 3868503 3868914 -249387669 + L1MCc LINE L1 799 1252 -5171 402 174 35 0 chr2 3868938 3869024 -249387559 + L1MCc LINE L1 2318 2657 -4285 986 273 96 25 chr2 3869029 3869985 -249386598 + L1ME1 LINE L1 1729 2697 -3518 565 241 12 48 chr2 3869985 3870151 -249386432 - FRAM SINE Alu -6 160 1 994 241 113 12 chr2 3870152 3870649 -249385934 + L1ME1 LINE L1 2916 3462 -2753 849 262 53 37 chr2 3870679 3871110 -249385473 + L1ME1 LINE L1 4143 4580 -1635 935 260 138 28 chr2 3871164 3871689 -249384894 + L1ME1 LINE L1 5327 5895 -340 237 33 0 0 chr2 3871704 3871734 -249384849 + (TA)n Simple_repeat Simple_repeat 2 31 0 530 269 54 16 chr2 3871888 3872074 -249384509 + L1ME1 LINE L1 5989 6181 -54 2291 105 3 0 chr2 3872127 3872433 -249384150 - AluSq SINE Alu -6 307 1 446 186 0 10 chr2 3873477 3873574 -249383009 + GA-rich Low_complexity Low_complexity 2 97 0 1460 196 49 63 chr2 3875590 3876018 -249380565 - L1MA8 LINE L1 -93 6198 5777 248 155 103 38 chr2 3875990 3876070 -249380513 + L1MA8 LINE L1 6207 6291 0 * 24 0 0 0 chr2 3876073 3876097 -249380486 + AT_rich Low_complexity Low_complexity 1 24 0 207 228 0 51 chr2 3876681 3876760 -249379823 + T-rich Low_complexity Low_complexity 1 75 0 225 213 0 0 chr2 3877427 3877474 -249379109 + LTR67 LTR ERVL 509 555 -2 252 0 0 0 chr2 3877846 3877874 -249378709 + (TG)n Simple_repeat Simple_repeat 1 28 0 514 268 205 0 chr2 3879154 3879359 -249377224 - MIR SINE MIR -1 261 15 560 313 131 55 chr2 3879432 3879851 -249376732 - MLT1K LTR MaLR -135 453 3 190 327 0 0 chr2 3881079 3881134 -249375449 - MIR SINE MIR -14 248 194 2198 201 13 19 chr2 3881347 3881815 -249374768 + MLT1C LTR MaLR 1 465 -2 22 0 0 0 chr2 3883785 3883807 -249372776 + AT_rich Low_complexity Low_complexity 1 22 0 560 267 56 0 chr2 3884572 3884733 -249371850 + MLT-int LTR MaLR 596 765 -970 258 215 0 0 chr2 3884779 3884844 -249371739 + MER89 LTR ERV1 30 94 -465 279 160 20 0 chr2 3884921 3884971 -249371612 - MER34 LTR ERV1 -491 51 1 252 259 62 36 chr2 3885488 3885600 -249370983 + MER117 DNA MER1_type 3 117 -80 295 322 82 14 chr2 3886451 3886743 -249369840 + L1MC3 LINE L1 3681 3992 -2154 277 257 18 9 chr2 3886767 3886880 -249369703 + (TA)n Simple_repeat Simple_repeat 1 114 0 455 264 96 44 chr2 3886921 3887171 -249369412 + L1MC3 LINE L1 4062 4324 -1822 1441 194 26 23 chr2 3887185 3887489 -249369094 - MLT1A1 LTR MaLR -7 358 54 245 263 18 0 chr2 3887489 3887546 -249369037 - MST-int LTR MaLR -540 1111 1054 2261 251 44 18 chr2 3887561 3888178 -249368405 - MLT1A1-int LTR MaLR -970 765 133 1392 143 20 29 chr2 3888178 3888347 -249368236 - MSTA LTR MaLR 0 428 260 2275 145 3 6 chr2 3888347 3888712 -249367871 + THE1B LTR MaLR 1 364 0 1392 143 20 29 chr2 3888712 3888786 -249367797 - MSTA LTR MaLR -168 260 187 886 152 20 51 chr2 3888846 3889043 -249367540 - MSTA LTR MaLR -237 191 1 765 160 15 0 chr2 3889047 3889178 -249367405 - MLT1A1-int LTR MaLR -1602 133 1 1772 174 32 12 chr2 3889179 3889519 -249367064 - MLT1A1 LTR MaLR 0 365 19 1637 210 38 0 chr2 3889994 3890341 -249366242 - MLT1A1 LTR MaLR -2 363 4 265 318 46 23 chr2 3890354 3890571 -249366012 + L1MC3 LINE L1 4379 4600 -1546 1183 261 57 46 chr2 3890726 3891414 -249365169 + L1MC3 LINE L1 5467 6146 -1664 186 43 0 0 chr2 3891414 3891437 -249365146 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1183 261 57 46 chr2 3891437 3892478 -249364105 + L1MC3 LINE L1 6146 7174 -636 1804 138 4 8 chr2 3892478 3892738 -249363845 + AluSq SINE Alu 1 259 -54 1183 261 57 46 chr2 3892738 3892751 -249363832 + L1MC3 LINE L1 7174 7185 -625 222 37 0 0 chr2 3892751 3892778 -249363805 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1183 261 57 46 chr2 3892778 3893433 -249363150 + L1MC3 LINE L1 7185 7800 -10 290 154 66 55 chr2 3893631 3893722 -249362861 + L1ME3A LINE L1 6071 6162 -8 1784 178 3 0 chr2 3893734 3894027 -249362556 + AluJb SINE Alu 3 296 -16 5143 40 11 2 chr2 3894407 3895037 -249361546 - L1PA5 LINE L1 -4 6150 5515 365 239 0 22 chr2 3895182 3895274 -249361309 + L1MC4 LINE L1 6614 6703 -1339 382 102 87 0 chr2 3895277 3895404 -249361179 + (TA)n Simple_repeat Simple_repeat 1 138 0 1496 70 4 48 chr2 3895580 3895591 -249360992 - L1PA11 LINE L1 0 6174 6164 2234 92 0 22 chr2 3895591 3895906 -249360677 - AluSp SINE Alu -2 311 4 1496 70 4 48 chr2 3895906 3896124 -249360459 - L1PA11 LINE L1 -10 6164 5955 587 153 38 0 chr2 3896713 3896832 -249359751 - MLT1D LTR MaLR 0 505 396 318 26 0 0 chr2 3897658 3897697 -249358886 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 330 21 0 chr2 3897770 3897864 -249358719 + L3 LINE CR1 790 885 -692 21 0 0 0 chr2 3898816 3898837 -249357746 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 3900140 3900165 -249356418 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 3900434 3900462 -249356121 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 249 180 0 0 chr2 3900839 3900889 -249355694 + GA-rich Low_complexity Low_complexity 3 52 0 25 0 0 0 chr2 3901188 3901213 -249355370 + AT_rich Low_complexity Low_complexity 1 25 0 198 297 103 32 chr2 3902208 3902363 -249354220 + MIR SINE MIR 47 212 -50 234 0 0 0 chr2 3903827 3903853 -249352730 + (TG)n Simple_repeat Simple_repeat 1 26 0 251 263 13 40 chr2 3903859 3903935 -249352648 - MIR SINE MIR -115 147 74 443 296 100 71 chr2 3903985 3904265 -249352318 - L2 LINE L2 0 3313 3026 1387 253 31 14 chr2 3904615 3905038 -249351545 + MER63B DNA MER1_type 7 436 0 1508 43 5 0 chr2 3907410 3907598 -249348985 - AluY SINE Alu -4 307 119 29 0 0 0 chr2 3907708 3907737 -249348846 + AT_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr2 3908293 3908347 -249348236 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 3908369 3908397 -249348186 + AT_rich Low_complexity Low_complexity 1 28 0 191 402 12 12 chr2 3908489 3908571 -249348012 - MIR SINE MIR -161 101 20 3211 210 94 25 chr2 3908701 3909487 -249347096 - MER21B LTR ERV1 -11 852 13 193 320 154 0 chr2 3909491 3909569 -249347014 + L2 LINE L2 3164 3253 -19 3497 111 83 12 chr2 3909828 3910421 -249346162 - LTR24C LTR ERV1 0 635 1 5036 126 29 21 chr2 3910689 3911552 -249345031 - MER4D LTR ERV1 -2 870 1 2574 58 0 0 chr2 3911586 3911897 -249344686 + AluY SINE Alu 1 311 0 1404 277 25 11 chr2 3911963 3912407 -249344176 + Charlie1a DNA MER1_type 1 450 -1005 450 286 19 33 chr2 3912407 3912617 -249343966 + L1ME LINE L1 4574 4780 -1366 2904 143 24 24 chr2 3912649 3912769 -249343814 - MLT2A1 LTR ERVL 0 515 396 279 0 0 0 chr2 3912769 3912800 -249343783 + (TA)n Simple_repeat Simple_repeat 1 31 0 2904 143 24 24 chr2 3912800 3913186 -249343397 - MLT2A1 LTR ERVL -119 396 1 922 249 46 92 chr2 3913190 3913539 -249343044 - MLT1A2 LTR MaLR -21 353 21 904 178 51 0 chr2 3913557 3913714 -249342869 - MER72 LTR ERV1 -557 165 1 373 345 65 50 chr2 3913714 3914036 -249342547 + L1ME LINE L1 4966 5292 -854 240 254 17 0 chr2 3914093 3914152 -249342431 + GA-rich Low_complexity Low_complexity 1 60 0 297 341 75 26 chr2 3914191 3914575 -249342008 + L1ME LINE L1 5457 5859 -311 340 104 0 0 chr2 3914678 3914726 -249341857 - AluY SINE Alu -218 82 35 764 189 7 0 chr2 3914749 3914900 -249341683 - MLT1A2 LTR MaLR 0 390 237 182 387 32 8 chr2 3915014 3915138 -249341445 + MIR3 SINE MIR 14 140 -68 29 28 0 0 chr2 3915720 3915756 -249340827 + AT_rich Low_complexity Low_complexity 1 36 0 183 80 0 0 chr2 3916037 3916062 -249340521 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 363 271 66 36 chr2 3916083 3916249 -249340334 - L1ME LINE L1 -382 5739 5569 208 287 278 9 chr2 3916328 3916443 -249340140 + MER5A DNA MER1_type 44 189 0 346 303 10 0 chr2 3917131 3917230 -249339353 - MER5A DNA MER1_type -80 109 10 234 281 70 126 chr2 3917396 3917595 -249338988 + MIR SINE MIR 3 190 -72 2023 138 7 0 chr2 3919084 3919382 -249337201 + AluSx SINE Alu 2 301 -11 1870 118 47 4 chr2 3919860 3920139 -249336444 + AluSx SINE Alu 1 291 -21 464 254 114 55 chr2 3920156 3920214 -249336369 - MIR SINE MIR -2 260 207 252 86 0 0 chr2 3920214 3920249 -249336334 + (CA)n Simple_repeat Simple_repeat 2 36 0 464 254 114 55 chr2 3920249 3920426 -249336157 - MIR SINE MIR -55 207 11 28 0 0 0 chr2 3921564 3921592 -249334991 + AT_rich Low_complexity Low_complexity 1 28 0 185 298 48 0 chr2 3921748 3921832 -249334751 - L2 LINE L2 -2882 432 345 2272 256 44 50 chr2 3922433 3923091 -249333492 - L1MD3 LINE L1 -13 8400 7769 2812 6 0 10 chr2 3923091 3923404 -249333179 + AluY SINE Alu 1 310 -1 2272 256 44 50 chr2 3923404 3923592 -249332991 - L1MD3 LINE L1 -644 7769 7581 3351 138 27 0 chr2 3923595 3924317 -249332266 + L1P5 LINE L1 5053 5791 -360 219 114 0 0 chr2 3924323 3924358 -249332225 + (TA)n Simple_repeat Simple_repeat 2 36 0 263 104 0 21 chr2 3924361 3924409 -249332174 + L1P5 LINE L1 5784 5830 -321 2510 115 0 0 chr2 3924558 3924922 -249331661 + L1PB1 LINE L1 5788 6151 0 4379 248 75 43 chr2 3924929 3925054 -249331529 - L1MD3 LINE L1 -757 5807 5687 1382 213 10 30 chr2 3925054 3925350 -249331233 - AluJb SINE Alu -22 290 1 4379 248 75 43 chr2 3925350 3926653 -249329930 - L1MD3 LINE L1 -877 5687 6055 966 8 24 0 chr2 3926653 3926776 -249329807 + (TCTA)n Simple_repeat Simple_repeat 3 128 0 4379 248 75 43 chr2 3926776 3927503 -249329080 - L1MD3 LINE L1 -508 6056 5354 288 214 0 0 chr2 3927503 3927559 -249329024 - L1 LINE L1 -1329 5235 5180 25 31 0 0 chr2 3927575 3927607 -249328976 + AT_rich Low_complexity Low_complexity 1 32 0 6470 141 9 9 chr2 3927611 3929049 -249327534 - L1MA3 LINE L1 -1 7723 6287 * 9724 181 23 13 chr2 3929041 3930756 -249325827 - L1MA3 LINE L1 -5821 1744 13 4693 234 39 6 chr2 3930763 3932032 -249324551 - L1 LINE L1 -1364 6201 4892 285 200 0 17 chr2 3932030 3932090 -249324493 - L1M4c LINE L1 -6320 64 6 * 1405 291 43 33 chr2 3932075 3932885 -249323698 - L1MD3 LINE L1 -2181 4383 3566 238 125 18 36 chr2 3933521 3933577 -249323006 - L1MCc LINE L1 -6105 318 264 340 283 25 69 chr2 3933617 3933776 -249322807 - L1MD3 LINE L1 -5889 156 5 10287 90 5 16 chr2 3934021 3935797 -249320786 + L1P3 LINE L1 3875 5643 -511 298 38 0 113 chr2 3935796 3935849 -249320734 + L1PA7 LINE L1 6108 6154 0 * 391 244 41 32 chr2 3936913 3937036 -249319547 + MER5B DNA MER1_type 1 124 -54 375 23 0 0 chr2 3937161 3937205 -249319378 + (TG)n Simple_repeat Simple_repeat 1 44 0 1242 233 66 3 chr2 3937762 3938067 -249318516 + MLT1A1 LTR MaLR 1 324 -41 222 383 28 0 chr2 3938096 3938203 -249318380 + MIR SINE MIR 34 143 -65 202 307 93 21 chr2 3938398 3938538 -249318045 + L2 LINE L2 2671 2820 -494 355 333 32 43 chr2 3938584 3938770 -249317813 + MIR SINE MIR 8 191 -71 3073 223 55 43 chr2 3939251 3939941 -249316642 - L1MB5 LINE L1 -8 6166 5486 940 227 44 86 chr2 3939941 3940350 -249316233 - MSTD LTR MaLR 0 396 5 3073 223 55 43 chr2 3940350 3941357 -249315226 - L1MB5 LINE L1 -688 5486 4442 322 344 56 8 chr2 3943170 3943295 -249313288 + L2 LINE L2 3142 3272 0 312 262 76 81 chr2 3943367 3943577 -249313006 + L2 LINE L2 3101 3309 -4 453 293 6 17 chr2 3944736 3944917 -249311666 + C-rich Low_complexity Low_complexity 2 180 0 403 80 0 0 chr2 3945081 3945131 -249311452 - MER51B LTR ERV1 0 377 328 876 224 9 39 chr2 3945134 3945366 -249311217 - L1ME LINE L1 -370 6294 6070 523 272 76 31 chr2 3945372 3945596 -249310987 - MER2 DNA MER2_type -8 337 104 292 93 0 0 chr2 3945626 3945669 -249310914 + MADE1 DNA Mariner 38 80 0 486 217 47 9 chr2 3945678 3945784 -249310799 - MER2 DNA MER2_type -234 111 2 402 158 40 59 chr2 3945787 3945888 -249310695 - L1ME LINE L1 -610 6072 5974 725 141 0 8 chr2 3945888 3946016 -249310567 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 3069 267 40 62 chr2 3946026 3947977 -249308606 - L1ME LINE L1 -743 5901 4067 607 291 36 40 chr2 3948061 3948536 -249308047 - L1ME LINE L1 -5195 1347 875 180 0 0 0 chr2 3948540 3948560 -249308023 + (TG)n Simple_repeat Simple_repeat 2 21 0 1923 178 15 3 chr2 3948560 3948902 -249307681 - MER7A DNA MER2_type -1 345 2 303 340 118 30 chr2 3948969 3949298 -249307285 - L1ME LINE L1 -5667 875 518 267 269 15 60 chr2 3949491 3949625 -249306958 - L1ME LINE L1 -6316 226 99 12859 160 43 11 chr2 3949879 3952223 -249304360 + Tigger1 DNA MER2_type 1 2418 0 285 326 11 42 chr2 3954113 3954253 -249302330 + MIR SINE MIR 2 139 -69 186 238 63 32 chr2 3954625 3954688 -249301895 + L3 LINE CR1 1479 1543 -34 247 280 140 11 chr2 3954713 3954806 -249301777 + L2 LINE L2 3199 3303 -10 457 139 40 0 chr2 3955036 3955137 -249301446 + (TATG)n Simple_repeat Simple_repeat 2 106 0 22 0 0 0 chr2 3955405 3955427 -249301156 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 3956106 3956129 -249300454 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1886 176 3 0 chr2 3956767 3957069 -249299514 - AluJb SINE Alu -9 303 1 873 103 5 43 chr2 3957506 3957691 -249298892 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2328 97 0 3 chr2 3959416 3959725 -249296858 - AluSc SINE Alu -1 308 1 207 88 0 0 chr2 3960034 3960068 -249296515 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 233 254 0 0 chr2 3961230 3961289 -249295294 + MLT1K LTR MaLR 530 588 0 392 118 65 30 chr2 3961788 3961957 -249294626 + (TA)n Simple_repeat Simple_repeat 2 176 0 236 201 25 19 chr2 3961960 3962119 -249294464 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 3276 55 19 3 chr2 3962227 3962772 -249293811 - L1P2 LINE L1 -431 5723 5171 1333 203 103 29 chr2 3963651 3963991 -249292592 - MLT1A1 LTR MaLR 0 365 1 349 212 0 50 chr2 3964270 3964368 -249292215 - MIR SINE MIR -64 144 68 591 183 25 0 chr2 3964735 3964855 -249291728 + MER58B DNA MER1_type 219 341 0 245 321 119 8 chr2 3966398 3966532 -249290051 + L2 LINE L2 3164 3312 -1 22 0 0 0 chr2 3966541 3966563 -249290020 + AT_rich Low_complexity Low_complexity 1 22 0 2501 68 0 3 chr2 3967004 3967314 -249289269 - AluY SINE Alu -2 309 1 4168 29 0 0 chr2 3967542 3968031 -249288552 + L1PA4 LINE L1 5664 6152 -3 1804 223 10 83 chr2 3968227 3968814 -249287769 + MER52A LTR ERV1 1207 1750 -5 1438 247 5 27 chr2 3968819 3969188 -249287395 + MLT1A1 LTR MaLR 3 363 -2 428 239 0 0 chr2 3969969 3970061 -249286522 - MIR3 SINE MIR -14 194 103 353 376 65 0 chr2 3971155 3971325 -249285258 + MIR SINE MIR 9 189 -73 299 65 22 0 chr2 3971666 3971712 -249284871 + (TC)n Simple_repeat Simple_repeat 2 48 0 327 136 0 0 chr2 3971748 3971807 -249284776 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 418 231 115 13 chr2 3972354 3972510 -249284073 - MLT1K LTR MaLR -32 556 385 1090 215 88 61 chr2 3972730 3972763 -249283820 - MLT2D LTR ERVL -6 408 377 297 0 0 0 chr2 3972763 3972796 -249283787 + (TG)n Simple_repeat Simple_repeat 1 33 0 1090 215 88 61 chr2 3972796 3972807 -249283776 - MLT2D LTR ERVL -37 377 368 186 43 0 0 chr2 3972807 3972830 -249283753 + (GA)n Simple_repeat Simple_repeat 2 24 0 1090 215 88 61 chr2 3972830 3973105 -249283478 - MLT2D LTR ERVL -46 368 72 1808 144 28 0 chr2 3973105 3973389 -249283194 - AluSg SINE Alu -12 298 7 1090 215 88 61 chr2 3973389 3973463 -249283120 - MLT2D LTR ERVL -342 72 2 207 139 0 0 chr2 3973575 3973611 -249282972 + (CA)n Simple_repeat Simple_repeat 2 37 0 221 237 0 13 chr2 3974257 3974333 -249282250 + GA-rich Low_complexity Low_complexity 3 77 0 233 272 224 8 chr2 3974698 3974823 -249281760 - MIR SINE MIR -11 251 100 396 0 0 0 chr2 3975240 3975284 -249281299 + (CA)n Simple_repeat Simple_repeat 2 45 0 246 136 0 0 chr2 3975899 3975943 -249280640 + (TG)n Simple_repeat Simple_repeat 1 44 0 226 250 190 40 chr2 3976795 3976895 -249279688 + L2 LINE L2 3158 3272 0 2038 127 3 0 chr2 3977111 3977415 -249279168 + AluSx SINE Alu 1 305 0 243 264 77 0 chr2 3977520 3977611 -249278972 + L1ME LINE L1 86 183 -5887 1790 262 90 43 chr2 3977748 3978836 -249277747 + L1M4 LINE L1 3696 4834 -1312 908 249 49 42 chr2 3978849 3979167 -249277416 + L1ME LINE L1 3975 4298 -1782 2612 46 0 0 chr2 3979167 3979469 -249277114 - AluY SINE Alu -9 302 1 908 249 49 42 chr2 3979469 3979579 -249277004 + L1ME LINE L1 4298 4406 -1674 337 265 90 11 chr2 3979563 3979831 -249276752 + L1ME LINE L1 4957 5245 -835 * 555 271 16 0 chr2 3979905 3980154 -249276429 + L1ME LINE L1 5259 5605 -450 1749 178 35 22 chr2 3980460 3980830 -249275753 - THE1C LTR MaLR 0 375 1 315 349 84 21 chr2 3980985 3981223 -249275360 - MIR SINE MIR -9 253 1 245 345 12 0 chr2 3981360 3981444 -249275139 - L3 LINE CR1 -346 1231 1147 24 0 0 0 chr2 3982495 3982519 -249274064 + AT_rich Low_complexity Low_complexity 1 24 0 187 240 20 20 chr2 3982858 3982908 -249273675 - MIR SINE MIR -63 199 150 6313 93 12 1 chr2 3983719 3984700 -249271883 + L1PA8 LINE L1 5175 6165 -7 240 301 108 0 chr2 3984817 3984910 -249271673 - MIR SINE MIR -35 227 125 199 317 131 7 chr2 3985138 3985283 -249271300 - MIR SINE MIR -37 225 63 33 0 0 0 chr2 3986033 3986066 -249270517 + AT_rich Low_complexity Low_complexity 1 33 0 390 42 0 0 chr2 3989050 3989098 -249267485 + (CAATT)n Simple_repeat Simple_repeat 2 49 0 40462 34 27 1 chr2 3989435 3995430 -249261153 + L1PA2 LINE L1 1 6154 -1 2187 139 0 0 chr2 3997525 3997826 -249258757 - AluSx SINE Alu -9 303 3 246 242 180 31 chr2 3998903 3999031 -249257552 - MIR SINE MIR 0 262 116 336 48 0 0 chr2 3999754 3999796 -249256787 + (TG)n Simple_repeat Simple_repeat 2 43 0 234 292 43 31 chr2 4002321 4002482 -249254101 - L1ME LINE L1 -312 5858 5696 275 303 18 9 chr2 4003125 4003234 -249253349 - L1ME LINE L1 -513 5651 5542 272 288 30 0 chr2 4003236 4003368 -249253215 - L1ME LINE L1 -710 5454 5319 403 262 153 49 chr2 4003403 4004177 -249252406 - L1ME LINE L1 -816 5330 4477 792 298 40 3 chr2 4004362 4004688 -249251895 + LTR53 LTR ERVL 49 386 -133 1216 204 17 3 chr2 4004699 4004993 -249251590 - L1P LINE L1 -964 5182 4885 180 26 53 26 chr2 4004999 4005037 -249251546 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1335 188 21 77 chr2 4005278 4005708 -249250875 + LTR52 LTR ERVL 13 418 -3 611 252 107 22 chr2 4005712 4006030 -249250553 - L1M4 LINE L1 -551 5633 5289 * 967 230 48 79 chr2 4006024 4006424 -249250159 - L1M4 LINE L1 -789 5357 4973 1860 191 5 0 chr2 4006424 4006802 -249249781 - L1MB2 LINE L1 -2 6169 5790 967 230 48 79 chr2 4006802 4006896 -249249687 - L1M4 LINE L1 -1173 4973 4878 364 273 7 56 chr2 4008113 4008256 -249248327 - L2 LINE L2 -203 3069 2934 218 397 94 21 chr2 4008299 4008533 -249248050 - L2 LINE L2 -459 2855 2605 225 287 66 37 chr2 4009168 4009304 -249247279 + MIR SINE MIR 122 261 -1 219 232 0 0 chr2 4009794 4009850 -249246733 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 1984 153 0 0 chr2 4010560 4010855 -249245728 - AluSx SINE Alu -15 297 3 373 273 105 14 chr2 4011983 4012126 -249244457 - L2 LINE L2 0 3313 3158 198 0 0 0 chr2 4012231 4012253 -249244330 + (TG)n Simple_repeat Simple_repeat 1 22 0 792 297 20 28 chr2 4012376 4012625 -249243958 - MIR SINE MIR -4 258 12 227 337 18 49 chr2 4013191 4013354 -249243229 + L2 LINE L2 2933 3090 -182 349 268 52 64 chr2 4013994 4014244 -249242339 - L1ME LINE L1 -312 5809 5563 22 88 0 0 chr2 4016619 4016676 -249239907 + AT_rich Low_complexity Low_complexity 1 57 0 373 251 53 68 chr2 4017427 4017728 -249238855 + L1MDb LINE L1 1191 1526 -5061 270 0 0 0 chr2 4017781 4017811 -249238772 + (CA)n Simple_repeat Simple_repeat 2 31 0 484 312 80 0 chr2 4018709 4018959 -249237624 + L1M4 LINE L1 1344 1613 -5246 955 246 90 52 chr2 4018982 4019426 -249237157 + L1M4 LINE L1 5633 6093 -864 820 205 12 89 chr2 4019434 4019692 -249236891 - LTR12 LTR ERV1 -239 475 238 8703 187 68 30 chr2 4020503 4022194 -249234389 + MER52A LTR ERV1 1 1755 0 202 200 0 0 chr2 4023216 4023256 -249233327 + MIR SINE MIR 185 224 -38 261 75 0 0 chr2 4023257 4023297 -249233286 + (GA)n Simple_repeat Simple_repeat 2 41 0 2346 100 3 0 chr2 4023473 4023773 -249232810 - AluSq SINE Alu -12 301 1 1826 188 6 6 chr2 4024003 4024354 -249232229 + L1 LINE L1 4410 4760 -1386 898 178 77 6 chr2 4024359 4024528 -249232055 - MLT1B LTR MaLR -202 188 8 262 274 264 0 chr2 4024618 4024724 -249231859 + L2 LINE L2 3180 3313 0 253 226 39 29 chr2 4025710 4025812 -249230771 + (CA)n Simple_repeat Simple_repeat 2 104 0 292 207 33 20 chr2 4025824 4025974 -249230609 + (CA)n Simple_repeat Simple_repeat 1 152 0 342 312 11 58 chr2 4026028 4026217 -249230366 + (CACG)n Simple_repeat Simple_repeat 1 180 0 * 442 261 6 30 chr2 4026097 4026262 -249230321 + (CA)n Simple_repeat Simple_repeat 1 161 0 306 333 0 0 chr2 4027667 4027775 -249228808 - MIR3 SINE MIR -8 200 93 245 185 15 31 chr2 4027924 4027989 -249228594 - MLT1E1 LTR MaLR -440 214 151 545 83 12 60 chr2 4027998 4028082 -249228501 - MADE1 DNA Mariner 0 80 1 378 61 0 0 chr2 4028200 4028249 -249228334 + (CA)n Simple_repeat Simple_repeat 2 50 0 411 333 15 0 chr2 4028621 4028753 -249227830 + L2 LINE L2 3136 3269 -3 563 329 118 34 chr2 4028894 4029260 -249227323 - L1MEc LINE L1 -4212 2184 1759 2256 92 0 0 chr2 4029260 4029544 -249227039 - AluSx SINE Alu -28 284 1 563 329 118 34 chr2 4029544 4029703 -249226880 - L1MEc LINE L1 -4637 1759 1615 21 0 0 0 chr2 4031233 4031254 -249225329 + AT_rich Low_complexity Low_complexity 1 21 0 723 222 28 113 chr2 4031341 4031661 -249224922 + MLT1C LTR MaLR 34 326 -141 331 282 139 19 chr2 4031927 4032193 -249224390 - HAL1b LINE L1 -21 1327 1030 383 276 173 28 chr2 4032218 4032472 -249224111 - HAL1b LINE L1 -523 825 535 489 272 51 0 chr2 4032524 4032682 -249223901 - HAL1b LINE L1 -701 647 482 254 329 0 0 chr2 4032788 4032864 -249223719 + CT-rich Low_complexity Low_complexity 3 78 0 1399 238 16 53 chr2 4033093 4033430 -249223153 + MLT2D LTR ERVL 50 373 -41 330 26 0 0 chr2 4033430 4033469 -249223114 + (CA)n Simple_repeat Simple_repeat 2 40 0 1399 238 16 53 chr2 4033469 4033510 -249223073 + MLT2D LTR ERVL 373 414 0 254 325 40 32 chr2 4035016 4035142 -249221441 + MIR SINE MIR 100 226 -36 1854 200 74 32 chr2 4035160 4035540 -249221043 - MSTD LTR MaLR 0 396 1 1828 192 61 0 chr2 4035545 4035905 -249220678 + MSTC LTR MaLR 4 385 -43 2041 224 41 5 chr2 4035905 4036316 -249220267 - MSTB LTR MaLR 0 426 1 2317 199 68 11 chr2 4036324 4036796 -249219787 - MSTB-int LTR MaLR -15 1636 1138 820 159 7 21 chr2 4037503 4037648 -249218935 + FLAM_C SINE Alu 1 143 0 1698 152 17 30 chr2 4037652 4037954 -249218629 + AluJb SINE Alu 1 298 -14 594 194 0 0 chr2 4038190 4038293 -249218290 - FLAM_C SINE Alu -39 104 2 25 31 0 0 chr2 4038801 4038833 -249217750 + AT_rich Low_complexity Low_complexity 1 32 0 29 78 0 0 chr2 4038933 4038997 -249217586 + AT_rich Low_complexity Low_complexity 1 64 0 289 281 99 9 chr2 4039233 4039367 -249217216 + L1ME LINE L1 11 442 -5954 201 74 0 0 chr2 4039556 4039583 -249217000 + (A)n Simple_repeat Simple_repeat 1 27 0 2158 114 0 25 chr2 4039903 4040220 -249216363 - AluY SINE Alu -2 309 1 21 0 0 0 chr2 4040229 4040250 -249216333 + AT_rich Low_complexity Low_complexity 1 21 0 1971 148 3 7 chr2 4040252 4040557 -249216026 - AluSx SINE Alu -8 304 1 674 103 0 0 chr2 4040583 4040670 -249215913 + AluS SINE Alu 1 87 -226 2097 75 8 0 chr2 4040884 4041150 -249215433 - AluSp SINE Alu -45 268 1 801 142 0 8 chr2 4041193 4041320 -249215263 + FLAM_C SINE Alu 13 138 -5 286 293 38 57 chr2 4041320 4041426 -249215157 + L2 LINE L2 3198 3301 -12 1437 169 0 4 chr2 4041426 4041657 -249214926 + AluSx SINE Alu 1 230 -82 246 316 26 0 chr2 4041709 4041785 -249214798 - MIR SINE MIR -138 124 47 970 195 0 26 chr2 4042158 4042348 -249214235 + AluJo SINE Alu 1 185 -127 180 97 0 0 chr2 4042637 4042668 -249213915 + (G)n Simple_repeat Simple_repeat 1 31 0 2255 113 0 0 chr2 4043049 4043349 -249213234 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 4043609 4043633 -249212950 + AT_rich Low_complexity Low_complexity 1 24 0 234 128 0 0 chr2 4043889 4043928 -249212655 + (CA)n Simple_repeat Simple_repeat 2 40 0 1946 138 10 3 chr2 4045921 4046212 -249210371 + AluSx SINE Alu 3 295 -17 25 0 0 0 chr2 4046214 4046239 -249210344 + AT_rich Low_complexity Low_complexity 1 25 0 472 273 67 7 chr2 4046387 4046537 -249210046 - MIR SINE MIR -14 248 90 503 108 0 27 chr2 4046537 4046611 -249209972 + AluS SINE Alu 2 73 -240 215 320 31 10 chr2 4046635 4046732 -249209851 + CT-rich Low_complexity Low_complexity 2 100 0 929 187 12 0 chr2 4047021 4047187 -249209396 - FAM SINE Alu 0 49 1 2243 99 0 0 chr2 4047423 4047756 -249208827 + AluSx SINE Alu 1 333 0 342 259 12 0 chr2 4047756 4047841 -249208742 + L1M4 LINE L1 4740 4825 -1321 1125 155 6 6 chr2 4047841 4048015 -249208568 + AluSx SINE Alu 1 174 -138 482 260 95 18 chr2 4048159 4048328 -249208255 + L1ME3A LINE L1 5952 6133 -37 1162 165 55 5 chr2 4048336 4048554 -249208029 + MER46A DNA MER2_type 1 229 -7 273 274 66 38 chr2 4048561 4048667 -249207916 + L1ME3A LINE L1 5901 6009 -161 255 188 109 31 chr2 4048880 4048944 -249207639 + MER5C DNA MER1_type 56 124 -200 212 266 38 0 chr2 4049118 4049197 -249207386 + A-rich Low_complexity Low_complexity 1 82 0 866 241 44 4 chr2 4049534 4049762 -249206821 - AluJo SINE Alu 0 312 76 761 182 0 15 chr2 4049869 4050001 -249206582 + AluJb SINE Alu 180 309 -3 284 247 0 0 chr2 4050071 4050144 -249206439 + (CCCTAA)n Simple_repeat Simple_repeat 5 77 0 5491 88 39 46 chr2 4050145 4051189 -249205394 + SVA Other Other 8 868 -590 455 329 15 14 chr2 4051227 4051445 -249205138 + CT-rich Low_complexity Low_complexity 1 218 0 224 187 22 22 chr2 4051498 4051589 -249204994 + CT-rich Low_complexity Low_complexity 3 93 0 384 219 62 27 chr2 4051912 4052058 -249204525 + L1ME4a LINE L1 5967 6117 -4 2147 110 3 10 chr2 4053718 4054017 -249202566 - AluSq SINE Alu -16 297 1 189 0 0 0 chr2 4054022 4054043 -249202540 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 4054740 4054761 -249201822 + GC_rich Low_complexity Low_complexity 1 21 0 549 146 37 0 chr2 4054942 4055024 -249201559 - FLAM SINE Alu -16 127 43 1099 112 0 13 chr2 4056039 4056191 -249200392 + AluSq/x SINE Alu 1 150 -163 354 23 0 0 chr2 4056311 4056354 -249200229 + (G)n Simple_repeat Simple_repeat 1 43 0 367 196 0 56 chr2 4057583 4057690 -249198893 - LTR41 LTR ERVL -11 762 662 945 91 0 0 chr2 4058043 4058164 -249198419 + AluSc SINE Alu 175 295 -14 2313 100 0 3 chr2 4058230 4058541 -249198042 + AluY SINE Alu 1 310 -1 2060 131 0 0 chr2 4058543 4058825 -249197758 + AluSx SINE Alu 1 316 0 208 88 0 0 chr2 4058825 4058859 -249197724 + (TAAAA)n Simple_repeat Simple_repeat 2 155 0 332 192 71 30 chr2 4059633 4059732 -249196851 - FLAM_C SINE Alu -7 126 24 29 70 0 0 chr2 4060607 4060664 -249195919 + AT_rich Low_complexity Low_complexity 1 57 0 804 218 14 0 chr2 4060669 4060816 -249195767 - FAM SINE Alu -36 149 1 444 179 36 12 chr2 4061136 4061220 -249195363 - MLT1E1 LTR MaLR -50 604 519 1701 182 3 16 chr2 4061866 4062002 -249194581 + AluJb SINE Alu 1 137 -175 2292 101 3 0 chr2 4062002 4062299 -249194284 + AluSq SINE Alu 1 298 -15 1701 182 3 16 chr2 4062299 4062470 -249194113 + AluJb SINE Alu 137 304 -8 2080 115 20 0 chr2 4062658 4062954 -249193629 + AluSx SINE Alu 1 302 -10 207 188 0 0 chr2 4063216 4063264 -249193319 + (TTA)n Simple_repeat Simple_repeat 2 49 0 834 162 78 24 chr2 4063276 4063443 -249193140 - AluJb SINE Alu -44 268 93 466 130 0 26 chr2 4063453 4063530 -249193053 + MLT1A1 LTR MaLR 291 365 0 2282 110 0 3 chr2 4063980 4064281 -249192302 + AluSg SINE Alu 1 300 -10 1971 141 38 0 chr2 4064320 4064610 -249191973 + AluSx SINE Alu 1 301 -11 918 169 39 0 chr2 4064610 4064764 -249191819 + AluSg/x SINE Alu 132 291 -19 446 273 72 24 chr2 4064765 4064974 -249191609 + L1MDb LINE L1 936 1154 -5255 187 224 90 30 chr2 4065045 4065112 -249191471 - MIR SINE MIR -158 104 34 845 183 0 0 chr2 4065648 4065790 -249190793 - FLAM_C SINE Alu -1 142 1 22 70 0 0 chr2 4065934 4065977 -249190606 + AT_rich Low_complexity Low_complexity 1 43 0 2517 157 37 5 chr2 4066124 4066557 -249190026 - L1MB4 LINE L1 -7 6173 5727 1659 159 21 14 chr2 4066775 4067065 -249189518 + AluJb SINE Alu 1 292 -20 1814 148 45 0 chr2 4067454 4067745 -249188838 - AluJb SINE Alu -8 304 1 305 260 95 41 chr2 4067747 4067916 -249188667 - L1M4 LINE L1 -3114 3032 2855 1367 81 0 6 chr2 4068095 4068269 -249188314 + AluSp SINE Alu 131 303 -10 263 77 51 0 chr2 4068931 4068970 -249187613 + HAL1 LINE L1 527 567 -1940 1030 429 98 0 chr2 4069164 4069439 -249187144 - AluSx SINE Alu 0 302 1 733 183 0 46 chr2 4069439 4069570 -249187013 + FAM SINE Alu 25 149 -36 267 267 160 61 chr2 4069672 4069803 -249186780 - L2 LINE L2 -1 3312 3169 1914 195 41 31 chr2 4069814 4070204 -249186379 + MSTD LTR MaLR 1 394 -2 1992 113 13 17 chr2 4070204 4070328 -249186255 + AluSg SINE Alu 12 135 -175 2229 84 3 20 chr2 4070328 4070625 -249185958 + AluY SINE Alu 1 292 -19 1992 113 13 17 chr2 4070625 4070800 -249185783 + AluSg SINE Alu 135 310 0 1014 230 5 0 chr2 4070820 4071007 -249185576 - MER5A DNA MER1_type 0 189 2 460 251 141 25 chr2 4071012 4071211 -249185372 - L2 LINE L2 -140 3173 2952 2930 43 32 3 chr2 4071318 4071705 -249184878 + SVA Other Other 1011 1407 0 197 244 24 0 chr2 4071705 4071746 -249184837 + L2 LINE L2 2773 2814 -500 1214 130 5 65 chr2 4071749 4071964 -249184619 - AluJo SINE Alu -4 308 107 650 88 0 0 chr2 4071974 4072054 -249184529 + AluSp/q SINE Alu 215 294 -19 * 706 172 9 9 chr2 4072053 4072169 -249184414 - AluJo SINE Alu -195 117 2 2372 95 3 0 chr2 4072222 4072518 -249184065 + AluSq SINE Alu 1 297 -16 1610 296 23 58 chr2 4072518 4073016 -249183567 - HERVL LTR ERVL -1231 4533 4045 1658 138 0 71 chr2 4073016 4073198 -249183385 - AluJo SINE Alu -16 296 139 2322 119 0 0 chr2 4073198 4073501 -249183082 + AluSg SINE Alu 1 303 -7 1658 138 0 71 chr2 4073501 4073601 -249182982 - AluJo SINE Alu -173 139 34 1610 296 23 58 chr2 4073601 4073953 -249182630 - HERVL LTR ERVL -1719 4045 3682 2201 94 0 0 chr2 4074193 4074468 -249182115 + AluSx SINE Alu 1 275 -37 203 0 0 36 chr2 4074472 4074500 -249182083 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 310 332 70 27 chr2 4074522 4074709 -249181874 + MIR SINE MIR 20 214 -48 1957 130 3 7 chr2 4075076 4075402 -249181181 - AluSx SINE Alu 0 325 1 32 43 0 0 chr2 4076331 4076377 -249180206 + AT_rich Low_complexity Low_complexity 1 46 0 1361 144 87 9 chr2 4077106 4077335 -249179248 - MSTA LTR MaLR 0 428 182 1340 69 0 0 chr2 4077346 4077506 -249179077 - L1PA7 LINE L1 -5 6149 5990 2425 69 3 13 chr2 4077514 4077820 -249178763 - AluSc SINE Alu -6 303 1 239 115 39 77 chr2 4077837 4077889 -249178694 - Alu SINE Alu -167 135 86 574 181 11 0 chr2 4078013 4078107 -249178476 - FAM SINE Alu -89 96 2 379 250 36 0 chr2 4079178 4079290 -249177293 - LTR16A1 LTR ERVL -15 442 327 2174 114 0 7 chr2 4079290 4079587 -249176996 + AluSx SINE Alu 1 295 -17 2456 212 105 23 chr2 4079651 4079856 -249176727 + L1MC4 LINE L1 7001 7188 -854 1852 230 146 13 chr2 4079856 4080378 -249176205 + MLT1E LTR MaLR 1 591 -2 2456 212 105 23 chr2 4080378 4080950 -249175633 + L1MC4 LINE L1 7188 7842 -200 333 118 0 0 chr2 4081167 4081185 -249175398 + (CA)n Simple_repeat Simple_repeat 1 69 0 333 118 0 0 chr2 4081185 4081236 -249175347 + (CA)n Simple_repeat Simple_repeat 2 52 0 204 67 0 0 chr2 4081253 4081283 -249175300 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 608 101 0 0 chr2 4081327 4081406 -249175177 + AluS SINE Alu 2 80 -232 1069 150 0 0 chr2 4081856 4082016 -249174567 - AluSq SINE Alu -20 293 134 2469 71 0 0 chr2 4082016 4082313 -249174270 - AluY SINE Alu -14 297 1 2381 81 13 0 chr2 4082313 4082620 -249173963 - AluSx SINE Alu -1 311 1 28 0 0 0 chr2 4082621 4082649 -249173934 + AT_rich Low_complexity Low_complexity 1 28 0 465 291 92 0 chr2 4083287 4083428 -249173155 - MIR3 SINE MIR -10 198 45 286 232 63 42 chr2 4085759 4085854 -249170729 - HERVL LTR ERVL -1355 4299 4203 781 240 36 25 chr2 4085857 4086053 -249170530 + MIR SINE MIR 63 260 -2 1050 111 0 76 chr2 4086520 4086692 -249169891 + FRAM SINE Alu 1 159 -17 249 281 210 27 chr2 4086754 4086978 -249169605 - L2 LINE L2 -1104 2210 1946 387 339 125 19 chr2 4087323 4087739 -249168844 + L2 LINE L2 1745 2204 -1110 1365 143 0 31 chr2 4088414 4088637 -249167946 - AluSg/x SINE Alu -14 296 81 1550 176 116 147 chr2 4089064 4089152 -249167431 + L1MC5 LINE L1 6962 7051 -910 2109 113 26 22 chr2 4089152 4089463 -249167120 - AluSq SINE Alu -1 312 1 1550 176 116 147 chr2 4089463 4090287 -249166296 + L1MC5 LINE L1 7051 7846 -115 1257 287 16 3 chr2 4090460 4090774 -249165809 + LTR16A LTR ERVL 123 440 -10 354 204 108 32 chr2 4090777 4090870 -249165713 + HERV16 LTR ERVL 1985 2084 -2912 422 311 104 5 chr2 4090892 4091085 -249165498 + HERV16 LTR ERVL 2245 2456 -2540 844 276 97 47 chr2 4091098 4091479 -249165104 + HERV16 LTR ERVL 3314 3713 -2051 1174 76 139 0 chr2 4091481 4091653 -249164930 + MSTA LTR MaLR 1 196 -232 2193 120 0 0 chr2 4091655 4091954 -249164629 + AluSx SINE Alu 1 299 -13 247 218 0 0 chr2 4091955 4092010 -249164573 + L1MD2 LINE L1 1562 1616 -4924 1827 163 28 3 chr2 4092013 4092301 -249164282 + AluJb SINE Alu 1 295 -17 2739 196 175 19 chr2 4092355 4093252 -249163331 + L1MD2 LINE L1 1606 2642 -3898 2720 215 104 20 chr2 4093252 4093951 -249162632 + L1MD2 LINE L1 5969 6726 -27 300 236 0 113 chr2 4093980 4094047 -249162536 + MLT1K LTR MaLR 3 55 -533 2196 129 0 3 chr2 4094047 4094342 -249162241 + AluSx SINE Alu 1 294 -18 300 236 0 113 chr2 4094342 4094380 -249162203 + MLT1K LTR MaLR 55 96 -492 240 237 13 26 chr2 4094622 4094698 -249161885 + LTR67 LTR ERVL 472 546 -11 2162 131 0 0 chr2 4094705 4095017 -249161566 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 4095066 4095093 -249161490 + AT_rich Low_complexity Low_complexity 1 27 0 806 118 0 0 chr2 4095463 4095573 -249161010 - AluSg/x SINE Alu -18 292 183 11555 25 0 6 chr2 4095684 4097905 -249158678 + L1HS LINE L1 3951 6155 0 369 263 0 26 chr2 4097903 4098055 -249158528 + L1MC3 LINE L1 3646 3793 -2747 * 878 229 63 76 chr2 4098037 4098434 -249158149 + L1MC3 LINE L1 5271 5662 -878 3751 199 12 4 chr2 4098434 4099157 -249157426 + Tigger2 DNA MER2_type 1 729 -1989 1152 170 122 0 chr2 4099197 4099427 -249157156 + Tigger2 DNA MER2_type 2461 2718 0 10028 203 51 23 chr2 4099431 4100735 -249155848 + L1MC3 LINE L1 5665 7069 -1110 402 21 0 0 chr2 4100735 4100782 -249155801 + (TG)n Simple_repeat Simple_repeat 2 48 0 10028 203 51 23 chr2 4100782 4101909 -249154674 + L1MC3 LINE L1 7069 8163 -16 219 209 149 15 chr2 4101991 4102058 -249154525 + MIR SINE MIR 113 188 -74 225 253 63 13 chr2 4102086 4102165 -249154418 - MARNA DNA Mariner -108 478 396 * 266 215 152 0 chr2 4102108 4102187 -249154396 + MARNA DNA Mariner 133 223 -363 22 70 0 0 chr2 4102239 4102282 -249154301 + AT_rich Low_complexity Low_complexity 1 43 0 340 325 81 34 chr2 4102379 4102613 -249153970 + MIR SINE MIR 18 262 0 28 48 0 0 chr2 4102646 4102688 -249153895 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 4102808 4102832 -249153751 + AT_rich Low_complexity Low_complexity 1 24 0 219 88 0 0 chr2 4103688 4103722 -249152861 + (GA)n Simple_repeat Simple_repeat 1 34 0 30 0 0 0 chr2 4104306 4104336 -249152247 + AT_rich Low_complexity Low_complexity 1 30 0 2124 140 0 3 chr2 4105596 4105904 -249150679 + AluSq SINE Alu 1 307 -6 2053 113 23 3 chr2 4105917 4106219 -249150364 + AluSg SINE Alu 1 308 -2 189 171 0 0 chr2 4106223 4106258 -249150325 + A-rich Low_complexity Low_complexity 1 35 0 612 134 0 0 chr2 4106280 4106362 -249150221 + FRAM SINE Alu 75 156 -20 3006 203 35 7 chr2 4106557 4107149 -249149434 - MSTB-int LTR MaLR -1042 609 1 2301 181 43 17 chr2 4107149 4107564 -249149019 - MSTB LTR MaLR 0 426 1 335 71 0 0 chr2 4107564 4107606 -249148977 + MSTC LTR MaLR 381 422 -6 1573 167 30 79 chr2 4107629 4107768 -249148815 + MLT2A2 LTR ERVL 52 196 -358 2477 70 0 6 chr2 4107768 4108081 -249148502 + AluY SINE Alu 1 311 0 1573 167 30 79 chr2 4108081 4108453 -249148130 + MLT2A2 LTR ERVL 196 554 0 333 0 0 0 chr2 4110933 4110970 -249145613 + (TC)n Simple_repeat Simple_repeat 2 38 0 647 258 75 0 chr2 4111189 4111375 -249145208 + MER63A DNA MER1_type 3 202 -8 30 0 0 0 chr2 4112095 4112125 -249144458 + AT_rich Low_complexity Low_complexity 1 30 0 258 224 0 0 chr2 4112435 4112520 -249144063 + CT-rich Low_complexity Low_complexity 1 85 0 283 289 52 82 chr2 4113339 4113474 -249143109 - MIR SINE MIR -13 249 119 21 57 0 0 chr2 4113603 4113638 -249142945 + AT_rich Low_complexity Low_complexity 1 35 0 2276 123 0 0 chr2 4114043 4114351 -249142232 + AluSg SINE Alu 1 308 -2 226 220 147 37 chr2 4114441 4114550 -249142033 + MIR SINE MIR 107 227 -35 2064 127 0 3 chr2 4115298 4115598 -249140985 - AluSq SINE Alu 0 313 15 207 0 0 0 chr2 4115601 4115624 -249140959 + (T)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr2 4117958 4117985 -249138598 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 505 275 50 84 chr2 4118233 4118851 -249137732 - HAL1 LINE L1 -886 1621 1025 21 36 0 0 chr2 4118897 4118925 -249137658 + AT_rich Low_complexity Low_complexity 1 28 0 236 53 26 0 chr2 4119535 4119573 -249137010 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2049 70 0 77 chr2 4119576 4119876 -249136707 - AluY SINE Alu -34 277 1 2049 136 13 0 chr2 4120171 4120473 -249136110 + AluSx SINE Alu 3 308 -4 180 125 0 0 chr2 4121093 4121125 -249135458 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 280 25 68 chr2 4121157 4121275 -249135308 - L2 LINE L2 -4 3309 3197 430 322 37 28 chr2 4122874 4123088 -249133495 - MIR SINE MIR -24 238 23 341 146 0 0 chr2 4124291 4124346 -249132237 + L1P5 LINE L1 5391 5445 -709 3451 55 2 0 chr2 4124355 4124789 -249131794 + L1PA5 LINE L1 5718 6152 -2 3334 188 120 5 chr2 4124800 4125568 -249131015 + L1MA8 LINE L1 5428 6283 -8 370 305 18 24 chr2 4126326 4126490 -249130093 - L1MD3 LINE L1 -5 7990 7828 330 67 317 0 chr2 4127129 4127189 -249129394 + MADE1 DNA Mariner 1 79 -1 181 278 0 0 chr2 4127764 4127800 -249128783 - L2 LINE L2 -16 3256 3221 432 248 58 7 chr2 4127882 4128019 -249128564 + L1M4 LINE L1 2436 2579 -3567 306 273 88 68 chr2 4128548 4128947 -249127636 + HAL1b LINE L1 68 474 -874 * 1846 284 89 30 chr2 4128944 4130468 -249126115 - L1MDa LINE L1 -1587 4819 3175 * 6099 218 37 14 chr2 4130464 4132520 -249124063 + L1MA4 LINE L1 4 2131 -4197 3445 83 0 0 chr2 4132520 4132964 -249123619 + MLT2A1 LTR ERVL 1 444 0 6099 218 37 14 chr2 4132964 4133606 -249122977 + L1MA4 LINE L1 2131 2756 -3572 5550 183 28 50 chr2 4133599 4134465 -249122118 + L1MA4 LINE L1 4061 4945 -1537 * 1949 117 25 3 chr2 4134465 4134825 -249121758 + AluSc SINE Alu 1 309 0 5550 183 28 50 chr2 4134825 4136380 -249120203 + L1MA4 LINE L1 4945 6425 -57 2281 87 0 3 chr2 4136380 4136667 -249119916 + AluY SINE Alu 3 288 -23 5550 183 28 50 chr2 4136667 4136718 -249119865 + L1MA4 LINE L1 6425 6476 -6 1231 266 85 23 chr2 4136753 4137415 -249119168 - L1MDa LINE L1 -3231 3175 2473 545 254 76 61 chr2 4137439 4138017 -249118566 - L1MDa LINE L1 -3984 2422 1836 307 214 0 95 chr2 4138023 4138149 -249118434 - L1MDa LINE L1 -4935 1471 1358 2084 74 0 0 chr2 4138149 4138419 -249118164 - L1PA6 LINE L1 0 6154 5885 502 308 44 54 chr2 4138456 4138953 -249117630 - L1MDa LINE L1 -5142 1267 776 2233 91 7 10 chr2 4140571 4140880 -249115703 - AluY SINE Alu -3 308 1 1390 210 35 11 chr2 4140885 4141171 -249115412 - AluJo SINE Alu -19 293 1 3923 262 64 48 chr2 4142955 4143845 -249112738 + L1MEc LINE L1 2078 2952 -3263 261 0 0 0 chr2 4143845 4143874 -249112709 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3923 262 64 48 chr2 4143874 4145207 -249111376 + L1MEc LINE L1 2952 4287 -1928 2335 278 55 43 chr2 4145569 4145683 -249110900 + L1MCb LINE L1 3 114 -5931 1528 166 50 68 chr2 4145683 4146063 -249110520 - THE1C LTR MaLR 0 375 3 2335 278 55 43 chr2 4146063 4146984 -249109599 + L1MCb LINE L1 114 1050 -4995 581 281 64 54 chr2 4147010 4147479 -249109104 + MER77 LTR ERV1 53 603 -2 271 190 25 25 chr2 4147646 4147725 -249108858 + L1MCb LINE L1 1057 1135 -5429 627 41 0 31 chr2 4147788 4147886 -249108697 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 2371 249 34 35 chr2 4147911 4149000 -249107583 + L1MCb LINE L1 2384 3471 -3093 2487 42 3 10 chr2 4149000 4149307 -249107276 - AluY SINE Alu -6 305 1 2371 249 34 35 chr2 4149307 4149529 -249107054 + L1MCb LINE L1 3471 3692 -2872 31556 36 34 2 chr2 4149542 4153459 -249103124 + L1P LINE L1 1 4044 -2102 1986 116 20 10 chr2 4153559 4153852 -249102731 - AluSq SINE Alu -17 296 1 269 282 14 0 chr2 4153995 4154066 -249102517 + MIR SINE MIR 126 197 -65 329 202 23 132 chr2 4155030 4155159 -249101424 - MER5B DNA MER1_type -58 120 6 23 0 0 0 chr2 4157627 4157650 -249098933 + AT_rich Low_complexity Low_complexity 1 23 0 32 0 0 0 chr2 4157948 4157980 -249098603 + AT_rich Low_complexity Low_complexity 1 32 0 276 30 0 0 chr2 4158092 4158125 -249098458 + (TG)n Simple_repeat Simple_repeat 2 34 0 1238 218 72 50 chr2 4158164 4158526 -249098057 - MLT1A2 LTR MaLR -1 373 4 1944 219 72 9 chr2 4158989 4159433 -249097150 - MER70A LTR ERVL 0 472 1 406 328 139 15 chr2 4159433 4159765 -249096818 - MLT1I LTR MaLR -36 373 1 453 323 111 49 chr2 4161048 4161435 -249095148 + L2 LINE L2 2504 2914 -400 367 315 49 27 chr2 4161515 4161699 -249094884 + L2 LINE L2 3122 3309 -4 23 0 0 0 chr2 4162188 4162211 -249094372 + AT_rich Low_complexity Low_complexity 1 23 0 289 322 21 10 chr2 4163578 4163680 -249092903 - MIR SINE MIR -66 142 40 189 242 145 0 chr2 4163807 4163869 -249092714 - MIR SINE MIR -105 103 33 2171 131 34 25 chr2 4164081 4164439 -249092144 - THE1B LTR MaLR -3 361 1 32 86 0 0 chr2 4164616 4164697 -249091886 + AT_rich Low_complexity Low_complexity 1 81 0 273 279 90 33 chr2 4165680 4165802 -249090781 - L2 LINE L2 -467 2847 2719 550 257 28 19 chr2 4165858 4166072 -249090511 - L1ME3 LINE L1 -2 6160 5945 339 247 12 0 chr2 4166087 4166168 -249090415 - L1ME3 LINE L1 -285 5885 5804 270 381 124 22 chr2 4166205 4166575 -249090008 - L2 LINE L2 -609 2705 2298 2893 59 0 5 chr2 4167106 4167495 -249089088 + L1PA7 LINE L1 5743 6129 -25 495 262 84 42 chr2 4168048 4168239 -249088344 - MLT1J2 LTR MaLR -251 199 1 315 0 0 0 chr2 4168598 4168633 -249087950 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 133 44 0 chr2 4168687 4168732 -249087851 + CT-rich Low_complexity Low_complexity 2 48 0 2367 83 6 0 chr2 4170322 4170647 -249085936 + L1PA8 LINE L1 5843 6169 -3 2390 80 0 3 chr2 4171121 4171421 -249085162 + AluSc SINE Alu 1 299 -10 185 358 37 0 chr2 4173195 4173276 -249083307 + MIR SINE MIR 60 143 -119 474 163 0 0 chr2 4174370 4174462 -249082121 - MER53 DNA DNA -2 187 96 1809 239 38 50 chr2 4174574 4175481 -249081102 - L1M4 LINE L1 -2497 3649 2754 262 224 31 31 chr2 4175744 4175905 -249080678 + (TA)n Simple_repeat Simple_repeat 2 162 0 420 136 0 0 chr2 4176571 4176630 -249079953 - AluS SINE Alu -237 72 14 1822 175 14 0 chr2 4177405 4177702 -249078881 - AluJo SINE Alu -10 302 2 2636 20 0 3 chr2 4178337 4178636 -249077947 - AluY SINE Alu -13 298 1 285 51 0 0 chr2 4178905 4178944 -249077639 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 309 309 94 69 chr2 4179000 4179404 -249077179 + HAL1 LINE L1 770 1183 -1324 998 223 36 43 chr2 4179404 4179709 -249076874 + MLT1C LTR MaLR 1 303 -164 244 215 114 0 chr2 4179831 4179910 -249076673 + HAL1 LINE L1 1198 1285 -1222 403 253 114 6 chr2 4181045 4181203 -249075380 + MLT1J2 LTR MaLR 8 182 -268 345 238 30 40 chr2 4181202 4181303 -249075280 + MLT1J1 LTR MaLR 202 301 -145 * 329 236 46 78 chr2 4183360 4183563 -249073020 + MIR SINE MIR 44 247 -15 653 250 56 12 chr2 4184054 4184376 -249072207 - MSTD LTR MaLR -14 382 1 21 0 0 0 chr2 4184548 4184569 -249072014 + AT_rich Low_complexity Low_complexity 1 21 0 2172 85 0 11 chr2 4185097 4185379 -249071204 + AluSg SINE Alu 1 279 -31 565 100 0 0 chr2 4185843 4185923 -249070660 + MADE1 DNA Mariner 1 80 0 403 296 72 34 chr2 4186229 4186493 -249070090 + L2 LINE L2 737 1010 -2304 685 250 6 33 chr2 4186516 4186696 -249069887 - FAM SINE Alu 0 175 1 1048 329 68 68 chr2 4186704 4187717 -249068866 + L2 LINE L2 1747 2759 -555 240 377 32 13 chr2 4188317 4188471 -249068112 + L2 LINE L2 2797 2953 -361 21 0 0 0 chr2 4188471 4188492 -249068091 + AT_rich Low_complexity Low_complexity 1 21 0 325 153 14 56 chr2 4188629 4188701 -249067882 - MLT1G LTR MaLR -306 284 216 791 308 42 39 chr2 4189089 4189449 -249067134 - L2 LINE L2 -536 2778 2418 365 326 8 8 chr2 4189628 4189757 -249066826 + MER58A DNA MER1_type 4 132 0 238 267 33 0 chr2 4189766 4189826 -249066757 + MER58A DNA MER1_type 163 224 0 233 229 37 83 chr2 4191124 4191233 -249065350 + MLT1D LTR MaLR 6 109 -517 596 269 88 4 chr2 4191269 4191507 -249065076 + MLT1D LTR MaLR 180 437 -68 4385 237 36 23 chr2 4192505 4192594 -249063989 - Charlie1a DNA MER1_type -1319 1442 1356 2042 156 27 16 chr2 4192594 4192965 -249063618 - THE1C LTR MaLR 0 375 1 9264 134 30 41 chr2 4192965 4194560 -249062023 - THE1C-int LTR MaLR 0 1580 3 1382 201 88 28 chr2 4194562 4194916 -249061667 - THE1C LTR MaLR 0 375 1 4385 237 36 23 chr2 4194916 4196233 -249060350 - Charlie1a DNA MER1_type -1405 1356 13 264 204 32 65 chr2 4198212 4198305 -249058278 - MLT1J LTR MaLR -379 132 43 305 330 82 21 chr2 4198736 4198969 -249057614 + L1MEd LINE L1 563 809 -5310 191 259 0 12 chr2 4199092 4199173 -249057410 + (TA)n Simple_repeat Simple_repeat 1 80 0 342 246 54 42 chr2 4199233 4199400 -249057183 + L1MEd LINE L1 1014 1182 -4937 8386 29 0 0 chr2 4199597 4200630 -249055953 - L1PA3 LINE L1 -1236 4910 3878 7707 19 2 0 chr2 4200630 4201908 -249054675 + L1PA3 LINE L1 4918 6197 0 2323 78 0 0 chr2 4202013 4202295 -249054288 + AluSx SINE Alu 1 282 -30 2010 279 68 44 chr2 4202938 4203619 -249052964 + L1ME1 LINE L1 43 767 -5629 2497 71 0 3 chr2 4203619 4203930 -249052653 + AluY SINE Alu 1 310 -1 2010 279 68 44 chr2 4203930 4204455 -249052128 + L1ME1 LINE L1 767 1278 -5118 1781 181 0 7 chr2 4204462 4204765 -249051818 - AluSx SINE Alu -11 301 1 288 0 0 0 chr2 4204886 4204918 -249051665 + (A)n Simple_repeat Simple_repeat 1 32 0 1343 275 100 22 chr2 4204918 4206595 -249049988 + L1ME1 LINE L1 1624 3426 -2789 900 237 111 45 chr2 4206583 4206630 -249049953 + L1ME1 LINE L1 4525 4567 -1648 * 222 118 0 0 chr2 4206630 4206664 -249049919 + (CA)n Simple_repeat Simple_repeat 1 34 0 900 237 111 45 chr2 4206664 4207131 -249049452 + L1ME1 LINE L1 4567 5073 -1142 905 158 0 0 chr2 4207135 4207268 -249049315 + AluSq/x SINE Alu 1 133 -180 1592 266 46 59 chr2 4207372 4208519 -249048064 + L1ME1 LINE L1 5109 6230 -5 1866 168 0 7 chr2 4208658 4208956 -249047627 + AluJb SINE Alu 1 296 -16 216 0 0 0 chr2 4208960 4208984 -249047599 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 490 277 94 24 chr2 4209340 4209631 -249046952 + L1ME3A LINE L1 5616 5922 -256 2167 135 0 0 chr2 4209713 4210010 -249046573 + AluSx SINE Alu 1 297 -15 2669 39 0 0 chr2 4210232 4210537 -249046046 + AluY SINE Alu 1 305 -6 1516 218 120 30 chr2 4210826 4211318 -249045265 - MER68 LTR ERV1 -4 558 23 259 282 57 16 chr2 4212145 4212269 -249044314 - L1ME4a LINE L1 -47 6074 5946 234 174 0 0 chr2 4212291 4212337 -249044246 + (TA)n Simple_repeat Simple_repeat 1 46 0 195 162 0 0 chr2 4213448 4213485 -249043098 + (TATG)n Simple_repeat Simple_repeat 4 40 0 184 250 115 0 chr2 4213905 4213957 -249042626 + L2 LINE L2 3117 3174 -98 188 336 75 15 chr2 4214461 4214595 -249041988 - MIR3 SINE MIR -35 173 32 2223 106 3 0 chr2 4214848 4215141 -249041442 + AluSq SINE Alu 1 294 -19 416 394 33 21 chr2 4215527 4215862 -249040721 + L3 LINE CR1 1084 1422 -155 23 33 0 0 chr2 4216442 4216472 -249040111 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr2 4217123 4217162 -249039421 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 4217773 4217811 -249038772 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 4218087 4218111 -249038472 + AT_rich Low_complexity Low_complexity 1 24 0 2327 118 8 30 chr2 4218777 4219149 -249037434 - THE1B LTR MaLR 0 364 1 11439 100 8 11 chr2 4219149 4220734 -249035849 - THE1B-int LTR MaLR 0 1580 1 2277 120 19 25 chr2 4220734 4221100 -249035483 - THE1B LTR MaLR 0 364 1 1436 221 24 3 chr2 4221691 4222021 -249034562 + MER2 DNA MER2_type 1 337 -8 557 301 92 15 chr2 4222132 4222338 -249034245 - MIR SINE MIR -27 235 14 307 375 97 21 chr2 4223125 4223413 -249033170 - L2 LINE L2 -1 3271 2962 2324 120 19 6 chr2 4223746 4224105 -249032478 - THE1B LTR MaLR 0 364 1 1497 190 47 0 chr2 4224789 4225063 -249031520 - AluJb SINE Alu -24 288 2 21 0 0 0 chr2 4225128 4225149 -249031434 + AT_rich Low_complexity Low_complexity 1 21 0 1718 172 6 21 chr2 4225481 4225813 -249030770 + MLT1A1 LTR MaLR 33 359 -6 243 61 0 0 chr2 4226920 4226953 -249029630 + (TG)n Simple_repeat Simple_repeat 2 34 0 353 250 11 11 chr2 4228065 4228157 -249028426 + L2 LINE L2 3221 3312 -1 12762 160 19 10 chr2 4229144 4231506 -249025077 + Tigger1 DNA MER2_type 26 2410 -8 254 26 53 0 chr2 4232840 4232878 -249023705 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 195 290 129 16 chr2 4234623 4234747 -249021836 + MIR SINE MIR 107 244 -18 383 169 0 0 chr2 4235751 4235828 -249020755 - L1PA15 LINE L1 -2 6163 6087 2906 155 21 6 chr2 4235830 4236352 -249020231 - L1PA15 LINE L1 -187 5978 5449 869 185 25 35 chr2 4237263 4237463 -249019120 + MER20 DNA MER1_type 1 198 -21 24 0 0 0 chr2 4237916 4237940 -249018643 + AT_rich Low_complexity Low_complexity 1 24 0 492 357 61 5 chr2 4238772 4238985 -249017598 + L2 LINE L2 2891 3115 -198 204 40 0 0 chr2 4238994 4239019 -249017564 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 1289 152 17 35 chr2 4239019 4239241 -249017342 - AluJo SINE Alu -29 283 64 395 266 105 0 chr2 4239499 4239642 -249016941 - MIR SINE MIR -13 249 92 306 0 0 0 chr2 4239957 4239991 -249016592 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 333 19 0 chr2 4240030 4240084 -249016499 + MER5A DNA MER1_type 72 126 -63 2371 235 34 14 chr2 4241661 4242316 -249014267 + Charlie1a DNA MER1_type 1 668 -787 827 181 84 34 chr2 4242335 4242572 -249014011 + Charlie1a DNA MER1_type 856 1104 -351 1523 179 94 21 chr2 4243136 4243252 -249013331 + L1MA9 LINE L1 5717 5823 -489 1708 213 29 79 chr2 4243252 4243835 -249012748 - MLT2B3 LTR ERVL 0 554 1 1523 179 94 21 chr2 4243835 4244182 -249012401 + L1MA9 LINE L1 5823 6312 0 845 174 0 0 chr2 4244275 4244407 -249012176 - FRAM SINE Alu -24 152 21 1644 172 97 3 chr2 4247507 4247815 -249008768 - MER1B DNA MER1_type 0 337 1 198 294 0 0 chr2 4248448 4248499 -249008084 - L2 LINE L2 0 3313 3263 1991 153 3 10 chr2 4248595 4248909 -249007674 + AluSx SINE Alu 1 312 0 555 327 104 78 chr2 4248937 4250355 -249006228 - L2 LINE L2 -220 3093 1636 814 302 66 13 chr2 4250893 4251198 -249005385 + LTR16A LTR ERVL 120 440 -10 1073 256 55 23 chr2 4251199 4251598 -249004985 + MLT1C LTR MaLR 1 412 -55 321 384 12 16 chr2 4251787 4252042 -249004541 + ERVL LTR ERVL 4744 4997 -767 1817 186 0 0 chr2 4252399 4252695 -249003888 + AluSx SINE Alu 1 296 -16 1983 141 14 39 chr2 4253385 4253747 -249002836 - L1PA16 LINE L1 -9 6157 5805 277 169 3 0 chr2 4253752 4253816 -249002767 + L1PA16 LINE L1 5752 5801 -364 27 0 0 0 chr2 4254246 4254273 -249002310 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 4254550 4254575 -249002008 + AT_rich Low_complexity Low_complexity 1 25 0 832 237 83 28 chr2 4254862 4255225 -249001358 - LTR52 LTR ERVL -37 384 2 1755 158 177 11 chr2 4255598 4255965 -249000618 - MSTA LTR MaLR 0 428 1 284 331 19 0 chr2 4256093 4256247 -249000336 + L1MEc LINE L1 101 257 -6139 1790 266 63 49 chr2 4257089 4258154 -248998429 + L1M4 LINE L1 4174 5253 -893 21 0 0 0 chr2 4259440 4259461 -248997122 + AT_rich Low_complexity Low_complexity 1 21 0 232 297 11 22 chr2 4259755 4259846 -248996737 + L1MEc LINE L1 112 201 -6195 297 323 39 32 chr2 4259905 4260184 -248996399 + L1ME2 LINE L1 5874 6154 -10 22 0 0 0 chr2 4260398 4260420 -248996163 + AT_rich Low_complexity Low_complexity 1 22 0 318 275 23 69 chr2 4260986 4261045 -248995538 - L1MB7 LINE L1 0 6184 6124 2893 151 40 31 chr2 4261045 4261567 -248995016 + MER1A DNA MER1_type 1 527 0 318 275 23 69 chr2 4261567 4261638 -248994945 - L1MB7 LINE L1 -60 6124 6060 1447 216 47 38 chr2 4261674 4262036 -248994547 - L1MB8 LINE L1 -99 6079 5711 1300 199 3 101 chr2 4262036 4262372 -248994211 + AluJo SINE Alu 1 303 -9 1447 216 47 38 chr2 4262372 4262454 -248994129 - L1MB8 LINE L1 -467 5711 5631 1714 254 65 15 chr2 4262454 4263114 -248993469 - L1M4 LINE L1 -3224 2922 2230 232 271 62 70 chr2 4263476 4263605 -248992978 + L2 LINE L2 3164 3291 -22 411 318 83 28 chr2 4263628 4264027 -248992556 + L1 LINE L1 4207 4627 -1519 21 57 0 0 chr2 4264055 4264090 -248992493 + AT_rich Low_complexity Low_complexity 1 35 0 440 235 20 0 chr2 4264288 4264386 -248992197 + MER46A DNA MER2_type 47 146 -90 * 990 199 57 64 chr2 4264384 4264680 -248991903 + MER2 DNA MER2_type 51 344 -1 209 184 0 0 chr2 4265587 4265625 -248990958 - MIR SINE MIR -168 94 57 201 270 63 3 chr2 4265628 4265710 -248990873 - MIR SINE MIR -64 144 81 536 276 0 17 chr2 4266038 4266219 -248990364 + (CA)n Simple_repeat Simple_repeat 1 178 0 273 364 33 54 chr2 4266515 4266699 -248989884 + L2 LINE L2 3075 3254 -18 303 335 80 17 chr2 4266741 4266917 -248989666 + MIR SINE MIR 49 235 -27 233 321 18 113 chr2 4269143 4269311 -248987272 + MIR SINE MIR 23 174 -88 22 0 0 0 chr2 4271986 4272008 -248984575 + AT_rich Low_complexity Low_complexity 1 22 0 450 109 75 9 chr2 4272353 4272700 -248983883 + (TA)n Simple_repeat Simple_repeat 1 370 0 27 73 0 0 chr2 4272779 4272834 -248983749 + AT_rich Low_complexity Low_complexity 1 55 0 192 77 0 0 chr2 4272837 4272863 -248983720 + (CATA)n Simple_repeat Simple_repeat 2 27 0 268 304 96 64 chr2 4274041 4274166 -248982417 + MIR3 SINE MIR 6 134 -74 278 294 22 44 chr2 4274168 4274304 -248982279 + MER94 DNA DNA 1 133 -1 242 194 16 0 chr2 4274740 4274802 -248981781 + GA-rich Low_complexity Low_complexity 4 66 0 279 324 72 9 chr2 4275007 4275118 -248981465 + L2 LINE L2 3195 3312 -1 1572 133 8 0 chr2 4275566 4275814 -248980769 + L1PA13 LINE L1 5905 6154 -9 420 301 20 14 chr2 4275877 4276023 -248980560 - MIR SINE MIR 0 262 116 200 114 68 0 chr2 4277976 4278020 -248978563 + T-rich Low_complexity Low_complexity 1 47 0 236 97 65 0 chr2 4278695 4278757 -248977826 + (TA)n Simple_repeat Simple_repeat 1 66 0 207 381 114 11 chr2 4281940 4282116 -248974467 - L2 LINE L2 -433 2881 2688 25 0 0 0 chr2 4282499 4282524 -248974059 + AT_rich Low_complexity Low_complexity 1 25 0 396 40 0 0 chr2 4282883 4282933 -248973650 + (CA)n Simple_repeat Simple_repeat 1 50 0 218 384 0 0 chr2 4283962 4284061 -248972522 + (CA)n Simple_repeat Simple_repeat 2 100 0 308 304 0 22 chr2 4284078 4284170 -248972413 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr2 4284537 4284565 -248972018 + AT_rich Low_complexity Low_complexity 1 28 0 223 163 41 0 chr2 4285985 4286034 -248970549 + A-rich Low_complexity Low_complexity 3 53 0 483 302 148 0 chr2 4286048 4286250 -248970333 - MIR SINE MIR -27 235 4 404 296 99 28 chr2 4286420 4286633 -248969950 + MIR SINE MIR 32 259 -3 1759 214 84 15 chr2 4287355 4287809 -248968774 - MER66B LTR ERV1 -1 485 1 873 67 0 8 chr2 4287915 4288035 -248968548 + L1PB1 LINE L1 6030 6148 -3 1342 187 45 11 chr2 4289452 4289805 -248966778 + MER50 LTR ERV1 94 458 -276 3033 168 96 30 chr2 4289805 4290958 -248965625 + pTR5 LTR ERV1 35 455 -259 1041 177 112 0 chr2 4290958 4291190 -248965393 + MER50 LTR ERV1 453 710 -24 22 35 0 0 chr2 4291535 4291564 -248965019 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 4292960 4292998 -248963585 + AT_rich Low_complexity Low_complexity 1 38 0 360 343 42 0 chr2 4293032 4293175 -248963408 + L1MC4 LINE L1 6768 6916 -1126 257 250 43 9 chr2 4293189 4293305 -248963278 + L1ME3A LINE L1 5993 6112 -58 369 0 0 0 chr2 4293323 4293364 -248963219 + (TG)n Simple_repeat Simple_repeat 2 42 0 349 238 131 52 chr2 4293421 4293673 -248962910 + L1MC4 LINE L1 6958 7229 -813 2238 92 0 14 chr2 4293844 4294139 -248962444 + AluY SINE Alu 1 291 -20 1200 215 63 26 chr2 4294942 4295291 -248961292 + MLT1A1 LTR MaLR 1 362 -3 187 200 0 80 chr2 4296223 4296273 -248960310 + L3 LINE CR1 1188 1233 -344 322 285 45 63 chr2 4297010 4297265 -248959318 - MIR SINE MIR -13 249 1 923 140 6 0 chr2 4297886 4298057 -248958526 + (TG)n Simple_repeat Simple_repeat 2 173 0 1561 189 28 7 chr2 4298340 4298626 -248957957 + AluSx SINE Alu 1 292 -20 194 274 105 32 chr2 4298976 4299071 -248957512 + MIR SINE MIR 116 217 -45 206 235 0 44 chr2 4299184 4299252 -248957331 + GA-rich Low_complexity Low_complexity 4 68 0 263 299 90 68 chr2 4299745 4299922 -248956661 + MIR SINE MIR 22 202 -60 1645 161 84 0 chr2 4300018 4300304 -248956279 + AluSx SINE Alu 1 310 -2 558 266 94 11 chr2 4300868 4301143 -248955440 + AluSx SINE Alu 5 302 0 1006 168 0 0 chr2 4301650 4301805 -248954778 - AluSg/x SINE Alu -3 309 155 590 240 188 41 chr2 4302432 4302848 -248953735 + L1MC4 LINE L1 7103 7579 -463 610 83 0 0 chr2 4302864 4302948 -248953635 + AluY SINE Alu 214 297 -14 22 94 0 0 chr2 4303148 4303212 -248953371 + AT_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 4303328 4303358 -248953225 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 4303609 4303654 -248952929 + AT_rich Low_complexity Low_complexity 1 45 0 1767 226 11 8 chr2 4303842 4304204 -248952379 - MLT1A1 LTR MaLR -2 363 1 195 286 67 84 chr2 4304446 4304565 -248952018 - L2 LINE L2 -1724 1590 1474 29 47 0 0 chr2 4304775 4304818 -248951765 + AT_rich Low_complexity Low_complexity 1 43 0 272 267 0 0 chr2 4304904 4304964 -248951619 + MSTC LTR MaLR 49 108 -320 310 254 25 90 chr2 4306213 4306335 -248950248 + MLT1J LTR MaLR 36 178 -301 1333 162 35 4 chr2 4306996 4307224 -248949359 + AluSg/x SINE Alu 73 307 -5 2334 85 7 0 chr2 4307302 4307596 -248948987 + AluSc SINE Alu 1 296 -13 1965 121 17 17 chr2 4308108 4308397 -248948186 + AluSx SINE Alu 1 289 -23 358 115 16 0 chr2 4308400 4308461 -248948122 - L1MB4 LINE L1 -28 6152 6091 2151 120 13 0 chr2 4308913 4309221 -248947362 - AluSp SINE Alu -1 312 1 3384 238 87 26 chr2 4309340 4309629 -248946954 + MER45B DNA AcHobo 1 271 -1310 2251 173 14 42 chr2 4309629 4310063 -248946520 - MSTB LTR MaLR -4 422 1 3384 238 87 26 chr2 4310063 4310754 -248945829 + MER45B DNA AcHobo 271 1040 0 845 261 28 21 chr2 4310951 4311242 -248945341 - L1PB3 LINE L1 -2986 3160 2868 5646 206 103 4 chr2 4311242 4312605 -248943978 + L1PB3 LINE L1 3186 4683 -1463 2009 173 55 107 chr2 4312595 4312806 -248943777 + L1PB3 LINE L1 5567 5788 -366 * 261 0 0 0 chr2 4312806 4312835 -248943748 + (TG)n Simple_repeat Simple_repeat 2 30 0 2009 173 55 107 chr2 4312835 4312907 -248943676 + L1PB3 LINE L1 5788 5862 -292 273 29 0 0 chr2 4312907 4312941 -248943642 + (TG)n Simple_repeat Simple_repeat 1 34 0 2009 173 55 107 chr2 4312941 4313262 -248943321 + L1PB3 LINE L1 5862 6140 -14 240 35 0 0 chr2 4314113 4314142 -248942441 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2155 86 0 0 chr2 4314144 4314423 -248942160 - AluY SINE Alu -32 279 1 195 368 35 49 chr2 4316857 4317001 -248939582 - MIR3 SINE MIR -52 156 15 21 0 0 0 chr2 4318094 4318115 -248938468 + AT_rich Low_complexity Low_complexity 1 21 0 236 244 41 32 chr2 4319259 4319382 -248937201 + (TG)n Simple_repeat Simple_repeat 1 124 0 2067 132 6 6 chr2 4319497 4319808 -248936775 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 4319904 4319927 -248936656 + AT_rich Low_complexity Low_complexity 1 23 0 2090 180 78 24 chr2 4320911 4321323 -248935260 + Tigger2a DNA MER2_type 1 434 0 1456 196 43 51 chr2 4321534 4321927 -248934656 - MLT1B LTR MaLR 0 390 1 245 109 62 0 chr2 4321984 4322048 -248934535 + (TG)n Simple_repeat Simple_repeat 2 69 0 240 190 6 49 chr2 4322196 4322359 -248934224 + (TG)n Simple_repeat Simple_repeat 1 156 0 401 219 31 31 chr2 4322399 4322559 -248934024 + (TG)n Simple_repeat Simple_repeat 2 161 0 312 294 51 110 chr2 4322663 4322831 -248933752 + L2 LINE L2 2736 2886 -428 2240 116 0 22 chr2 4322831 4323150 -248933433 - AluSx SINE Alu 0 312 1 312 294 51 110 chr2 4323150 4323236 -248933347 + L2 LINE L2 2886 2975 -339 288 130 0 0 chr2 4323467 4323513 -248933070 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 186 150 50 25 chr2 4323643 4323683 -248932900 + L2 LINE L2 2425 2465 -849 363 235 23 68 chr2 4323690 4323822 -248932761 + MER5B DNA MER1_type 23 148 -30 1882 130 7 0 chr2 4323870 4324146 -248932437 + MER61A LTR ERV1 65 342 -1 563 213 5 109 chr2 4325113 4325324 -248931259 - MER53 DNA DNA 0 189 1 1951 121 21 0 chr2 4326092 4326372 -248930211 + AluSx SINE Alu 1 286 -26 261 88 0 53 chr2 4329394 4329451 -248927132 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 3279 191 14 35 chr2 4329576 4329716 -248926867 + MER4D LTR ERV1 217 358 -545 2712 100 14 0 chr2 4329716 4330066 -248926517 + THE1A LTR MaLR 1 355 0 3279 191 14 35 chr2 4330066 4330617 -248925966 + MER4D LTR ERV1 358 894 -9 4364 114 116 130 chr2 4331197 4332622 -248923961 - pTR5 LTR ERV1 0 2438 743 2574 154 18 0 chr2 4333006 4333402 -248923181 + MER57A LTR ERV1 1 403 0 342 273 27 18 chr2 4333452 4333562 -248923021 + MIR3 SINE MIR 89 199 -9 309 264 213 7 chr2 4333773 4333953 -248922630 - MIR SINE MIR -6 256 38 204 254 0 34 chr2 4335492 4335551 -248921032 + GA-rich Low_complexity Low_complexity 2 58 0 259 272 43 11 chr2 4335835 4335927 -248920656 - L1ME LINE L1 -439 5682 5588 220 222 19 0 chr2 4336184 4336238 -248920345 + (CA)n Simple_repeat Simple_repeat 1 55 0 1978 173 80 0 chr2 4336263 4336575 -248920008 - MER1B DNA MER1_type 0 337 1 4303 307 116 28 chr2 4337428 4337638 -248918945 - L2 LINE L2 -615 2699 2509 185 0 40 0 chr2 4337638 4337663 -248918920 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4303 307 116 28 chr2 4337663 4339303 -248917280 - L2 LINE L2 -805 2509 632 2307 100 0 0 chr2 4339303 4339603 -248916980 + AluSc SINE Alu 1 300 -9 4303 307 116 28 chr2 4339603 4339896 -248916687 - L2 LINE L2 -2682 632 366 1429 237 52 43 chr2 4339940 4340003 -248916580 - MLT1C LTR MaLR -3 464 403 711 170 0 0 chr2 4340003 4340109 -248916474 + U6 snRNA snRNA 1 106 -1 1429 237 52 43 chr2 4340109 4340505 -248916078 - MLT1C LTR MaLR -64 403 1 2358 138 13 16 chr2 4340844 4341220 -248915363 - THE1C LTR MaLR 0 375 1 196 227 23 0 chr2 4341291 4341335 -248915248 - L2 LINE L2 -81 3191 3147 336 225 67 11 chr2 4341720 4341809 -248914774 - MLT1C LTR MaLR 0 467 374 3001 96 0 10 chr2 4343166 4343574 -248913009 + MLT2A1 LTR ERVL 1 404 -40 186 273 64 36 chr2 4343704 4343814 -248912769 + L2 LINE L2 2179 2291 -1023 244 337 23 12 chr2 4344354 4344440 -248912143 - MER5B DNA MER1_type -80 98 12 3409 114 7 0 chr2 4344486 4344935 -248911648 - MLT2A2 LTR ERVL -1 452 1 365 85 0 0 chr2 4345660 4345707 -248910876 - Alu SINE Alu -254 47 1 2551 118 0 3 chr2 4345965 4346320 -248910263 - THE1B LTR MaLR 0 364 11 262 308 34 51 chr2 4346822 4346939 -248909644 - MIR SINE MIR -100 162 48 449 386 55 48 chr2 4350299 4350698 -248905885 + L2 LINE L2 2870 3271 -1 837 183 109 45 chr2 4351029 4351231 -248905352 + MSTD LTR MaLR 1 215 -181 500 223 0 0 chr2 4351274 4351368 -248905215 + MSTD LTR MaLR 303 396 0 190 268 26 72 chr2 4352062 4352215 -248904368 + L2 LINE L2 2279 2424 -890 811 213 12 0 chr2 4353109 4353269 -248903314 + FRAM SINE Alu 1 159 -17 31 0 0 0 chr2 4353452 4353483 -248903100 + AT_rich Low_complexity Low_complexity 1 31 0 271 299 0 0 chr2 4353665 4353742 -248902841 + L1ME1 LINE L1 4522 4598 -1548 * 2744 261 31 27 chr2 4353738 4355093 -248901490 + L1ME1 LINE L1 4801 6162 -4 963 145 0 0 chr2 4355101 4355273 -248901310 + (TA)n Simple_repeat Simple_repeat 1 172 0 2049 151 53 34 chr2 4355297 4355654 -248900929 - THE1B LTR MaLR 0 364 1 2162 77 37 3 chr2 4555730 4556028 -248700555 + AluSx SINE Alu 1 308 -4 394 208 69 10 chr2 4556546 4556647 -248699936 - L1MC/D LINE L1 -2017 5768 5662 276 197 70 14 chr2 4556746 4556817 -248699766 + MER58C DNA MER1_type 127 201 -14 210 309 52 0 chr2 4557897 4557994 -248698589 + MIR SINE MIR 151 252 -10 243 267 0 69 chr2 4558195 4558311 -248698272 + G-rich Low_complexity Low_complexity 6 113 0 686 168 18 13 chr2 4559734 4559965 -248696618 + (CCCA)n Simple_repeat Simple_repeat 1 232 0 484 243 12 0 chr2 4559983 4560152 -248696431 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 * 582 188 28 11 chr2 4560125 4560301 -248696282 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 192 301 55 0 chr2 4565022 4565095 -248691488 - L2 LINE L2 -220 3052 2976 476 265 49 54 chr2 4567062 4567266 -248689317 - MIR SINE MIR -40 222 20 270 302 129 14 chr2 4572498 4572637 -248683946 - MIR SINE MIR -1 261 107 1315 213 33 26 chr2 4572798 4573103 -248683480 - MER44D DNA MER2_type -30 579 3 450 0 0 0 chr2 4573113 4573163 -248683420 + (TG)n Simple_repeat Simple_repeat 2 51 0 406 298 78 5 chr2 4573545 4573736 -248682847 + MIR SINE MIR 36 240 -22 205 216 83 49 chr2 4574007 4574121 -248682462 + MIR SINE MIR 11 139 -69 2205 104 0 0 chr2 4575502 4575800 -248680783 + AluSg SINE Alu 6 303 -7 357 323 110 16 chr2 4576240 4576526 -248680057 - L1ME LINE L1 -285 5836 5520 375 295 65 35 chr2 4576877 4577077 -248679506 - L2 LINE L2 -4 3309 3104 233 371 32 27 chr2 4577373 4577559 -248679024 - L2 LINE L2 -629 2685 2499 1737 141 0 14 chr2 4578128 4578405 -248678178 + AluSx SINE Alu 1 273 -39 1673 151 3 49 chr2 4580372 4580676 -248675907 + AluJo SINE Alu 1 290 -22 6698 196 160 9 chr2 4580724 4582356 -248674227 + L1PBa LINE L1 7 1884 -4979 3685 133 22 8 chr2 4582358 4583387 -248673196 + L1P5 LINE L1 4751 5794 -357 441 0 0 0 chr2 4583387 4583436 -248673147 + (TA)n Simple_repeat Simple_repeat 2 50 0 3685 133 22 8 chr2 4583436 4583463 -248673120 + L1P5 LINE L1 5794 5819 -332 2131 114 0 16 chr2 4585071 4585387 -248671196 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 4585387 4585408 -248671175 + AT_rich Low_complexity Low_complexity 1 21 0 1694 229 8 30 chr2 4586162 4586534 -248670049 + MLT1A1 LTR MaLR 1 364 -1 21 36 0 0 chr2 4586812 4586840 -248669743 + AT_rich Low_complexity Low_complexity 1 28 0 296 48 24 0 chr2 4586869 4586911 -248669672 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 231 114 0 0 chr2 4586912 4586947 -248669636 + (CGTTG)n Simple_repeat Simple_repeat 1 35 0 1928 150 0 0 chr2 4586949 4587236 -248669347 - AluSx SINE Alu -25 287 1 1433 176 3 102 chr2 4587501 4587825 -248668758 + AluJb SINE Alu 1 292 -20 393 136 0 0 chr2 4588461 4588527 -248668056 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 210 240 0 20 chr2 4590782 4590832 -248665751 + CT-rich Low_complexity Low_complexity 6 54 0 2145 96 10 0 chr2 4591850 4592152 -248664431 - AluSp SINE Alu -8 305 1 1830 143 24 0 chr2 4592880 4593167 -248663416 - AluSx SINE Alu -16 296 3 1224 266 65 54 chr2 4593194 4593731 -248662852 - L1ME1 LINE L1 -35 6131 5589 23 0 0 0 chr2 4594172 4594195 -248662388 + AT_rich Low_complexity Low_complexity 1 23 0 293 285 81 16 chr2 4595362 4595485 -248661098 - MIR SINE MIR -107 155 25 1837 130 74 0 chr2 4595540 4595824 -248660759 + AluSx SINE Alu 1 305 -7 207 0 0 0 chr2 4597926 4597949 -248658634 + (A)n Simple_repeat Simple_repeat 1 23 0 282 344 33 0 chr2 4598161 4598283 -248658300 - L2 LINE L2 -5 3308 3183 390 338 24 29 chr2 4599831 4600038 -248656545 + MIR SINE MIR 51 256 -6 1443 103 15 15 chr2 4604038 4604241 -248652342 + AluSq SINE Alu 2 204 -109 242 311 25 43 chr2 4605029 4605190 -248651393 - MIR3 SINE MIR -3 205 48 1657 156 33 0 chr2 4607597 4607841 -248648742 + AluJb SINE Alu 13 264 -48 667 224 44 6 chr2 4610339 4610522 -248646061 - L1MC4a LINE L1 -1951 5857 5668 333 195 37 49 chr2 4611362 4611444 -248645139 - L1MC4 LINE L1 -1326 6716 6636 218 269 0 0 chr2 4611752 4611804 -248644779 + GA-rich Low_complexity Low_complexity 1 52 0 553 271 109 35 chr2 4612281 4612621 -248643962 - MLT1J1 LTR MaLR -2 444 80 528 325 92 14 chr2 4613819 4614332 -248642251 - HAL1 LINE L1 -988 1519 967 2380 71 0 20 chr2 4615717 4616044 -248640539 + AluY SINE Alu 1 321 0 196 244 233 11 chr2 4616067 4616157 -248640426 - MIR SINE MIR -133 129 20 396 233 0 69 chr2 4616204 4616393 -248640190 + (CACAC)n Simple_repeat Simple_repeat 2 177 0 391 257 5 59 chr2 4616431 4616618 -248639965 + (CACAC)n Simple_repeat Simple_repeat 2 178 0 191 150 25 25 chr2 4617321 4617361 -248639222 - L2 LINE L2 -6 3307 3268 1036 252 66 7 chr2 4617373 4617647 -248638936 + L1MD2 LINE L1 6060 6349 -10 567 265 117 47 chr2 4618607 4618966 -248637617 - MLT1J2 LTR MaLR 0 450 67 757 160 56 0 chr2 4619109 4619234 -248637349 + AluJb SINE Alu 2 133 -179 1870 164 16 3 chr2 4619250 4619554 -248637029 + AluJb SINE Alu 1 308 -4 282 315 40 20 chr2 4619724 4619873 -248636710 + L1ME4a LINE L1 333 484 -5912 1648 198 60 11 chr2 4620490 4620843 -248635740 - MLT1A2 LTR MaLR -4 370 1 862 270 35 76 chr2 4620850 4620950 -248635633 + L1ME4a LINE L1 793 896 -5513 1038 212 38 19 chr2 4620950 4621162 -248635421 - MER20 DNA MER1_type -3 216 1 862 270 35 76 chr2 4621162 4621665 -248634918 + L1ME4a LINE L1 896 1371 -5038 2313 256 44 13 chr2 4621668 4622433 -248634150 + L1ME4a LINE L1 3760 4548 -1858 1409 221 143 20 chr2 4622435 4622923 -248633660 + L1ME4a LINE L1 5029 5576 -830 829 191 114 0 chr2 4622921 4623141 -248633442 - L1PA16 LINE L1 -1 6165 5921 * 213 154 0 0 chr2 4623938 4623977 -248632606 + (TG)n Simple_repeat Simple_repeat 1 39 0 701 289 39 10 chr2 4625295 4625499 -248631084 + MER58A DNA MER1_type 15 224 0 471 256 93 69 chr2 4625940 4626361 -248630222 + L1ME4a LINE L1 5877 6307 -74 8643 186 39 14 chr2 4626839 4628809 -248627774 + L1MA9 LINE L1 2897 4915 -1231 7292 126 18 129 chr2 4628812 4630414 -248626169 + Tigger4(Zombi) DNA MER2_type 4 1427 -1304 2169 137 35 30 chr2 4630414 4630787 -248625796 - THE1C LTR MaLR 0 375 1 9426 114 59 45 chr2 4630787 4632345 -248624238 - THE1B-int LTR MaLR 0 1580 1 2402 119 34 8 chr2 4632346 4632700 -248623883 - THE1B LTR MaLR -1 363 1 5078 159 36 22 chr2 4632702 4633849 -248622734 + L1MA9 LINE L1 5071 6200 -112 1770 190 0 0 chr2 4633849 4634128 -248622455 + AluJo SINE Alu 1 279 -33 375 23 0 0 chr2 4634128 4634172 -248622411 + (CA)n Simple_repeat Simple_repeat 1 44 0 5078 159 36 22 chr2 4634172 4634236 -248622347 + L1MA9 LINE L1 6199 6307 -5 895 243 38 0 chr2 4639306 4639516 -248617067 - MER20 DNA MER1_type 0 219 2 1007 214 43 12 chr2 4641401 4641658 -248614925 + MLT1B LTR MaLR 1 265 -125 889 179 11 11 chr2 4641701 4641880 -248614703 + MLT1B LTR MaLR 23 201 -189 485 268 94 24 chr2 4643153 4643407 -248613176 + HAL1 LINE L1 578 849 -1658 664 287 142 12 chr2 4643644 4643982 -248612601 + HAL1 LINE L1 1162 1543 -964 476 284 130 41 chr2 4643997 4644257 -248612326 + HAL1 LINE L1 1584 1874 -633 7136 92 34 9 chr2 4644257 4645202 -248611381 - LTR5 LTR ERVK -1 968 1 476 284 130 41 chr2 4645202 4645233 -248611350 + HAL1 LINE L1 1874 1901 -606 1262 220 116 25 chr2 4645400 4645796 -248610787 - MLT1C LTR MaLR 0 467 36 289 279 0 0 chr2 4646101 4646187 -248610396 + LTR67 LTR ERVL 468 553 -4 361 82 0 0 chr2 4646337 4646386 -248610197 - MADE1 DNA Mariner 0 80 32 490 284 28 11 chr2 4649831 4650007 -248606576 + (TG)n Simple_repeat Simple_repeat 1 179 0 407 220 28 34 chr2 4650045 4650378 -248606205 + (TATG)n Simple_repeat Simple_repeat 1 331 0 337 246 23 14 chr2 4650385 4650746 -248605837 + (TG)n Simple_repeat Simple_repeat 1 364 0 216 149 0 0 chr2 4651416 4651463 -248605120 + (A)n Simple_repeat Simple_repeat 1 47 0 2238 125 0 3 chr2 4651465 4651777 -248604806 + AluSx SINE Alu 1 311 -1 214 235 86 37 chr2 4651961 4652042 -248604541 - MIR SINE MIR -58 150 66 886 294 95 33 chr2 4652331 4653049 -248603534 + HAL1 LINE L1 597 1358 -1149 421 267 59 72 chr2 4653145 4653366 -248603217 + MIR SINE MIR 45 262 0 470 274 150 16 chr2 4653372 4653678 -248602905 + HAL1 LINE L1 1441 1787 -720 773 244 101 0 chr2 4653978 4654195 -248602388 + MIR SINE MIR 14 252 -10 720 225 62 72 chr2 4654544 4654937 -248601646 + LTR42 LTR ERVL 4 478 -17 2677 87 6 0 chr2 4654970 4655327 -248601256 - THE1B LTR MaLR -5 359 1 186 356 37 37 chr2 4655792 4655927 -248600656 + L2 LINE L2 3138 3272 0 209 189 0 0 chr2 4655929 4655966 -248600617 + (TGAG)n Simple_repeat Simple_repeat 1 37 0 263 266 156 18 chr2 4656041 4656150 -248600433 - L2 LINE L2 -1 3271 3148 565 348 74 40 chr2 4657914 4658291 -248598292 + HAL1 LINE L1 1039 1428 -1079 2303 123 0 0 chr2 4658294 4658603 -248597980 - AluSx SINE Alu -3 309 1 405 293 151 52 chr2 4658613 4658978 -248597605 + L1MC4a LINE L1 5766 6166 -1642 429 283 123 42 chr2 4658997 4659209 -248597374 - MLT1I LTR MaLR -66 343 115 1100 244 139 11 chr2 4659543 4660308 -248596275 + L1M4 LINE L1 1643 2527 -3855 871 243 17 0 chr2 4660317 4660498 -248596085 + MER8 DNA MER2_type 1 184 -55 2004 209 51 6 chr2 4660498 4660971 -248595612 + L1M4 LINE L1 4939 5432 -950 706 190 8 0 chr2 4660971 4661092 -248595491 + FLAM_C SINE Alu 9 130 -13 1716 197 0 10 chr2 4661096 4661390 -248595193 + AluJo SINE Alu 3 293 -19 1671 166 40 3 chr2 4661393 4661790 -248594793 + L1M4 LINE L1 5456 5865 -555 229 328 46 15 chr2 4661800 4661931 -248594652 + HAL1b LINE L1 387 521 -827 265 301 52 22 chr2 4662469 4662605 -248593978 + L1M4c LINE L1 3831 3970 -2412 1173 325 130 44 chr2 4662614 4662894 -248593689 + L1M4c LINE L1 4109 4364 -2018 282 29 0 0 chr2 4662894 4662929 -248593654 + (CA)n Simple_repeat Simple_repeat 2 36 0 1173 325 130 44 chr2 4662929 4663543 -248593040 + L1M4c LINE L1 4364 5080 -1302 1086 248 105 16 chr2 4663560 4663874 -248592709 + MER2 DNA MER2_type 1 342 -2 744 315 22 8 chr2 4663906 4664139 -248592444 + MIR SINE MIR 11 241 -21 222 307 0 50 chr2 4664825 4664926 -248591657 + (CACG)n Simple_repeat Simple_repeat 3 98 0 4151 154 37 47 chr2 4668382 4669376 -248587207 - MER11C LTR ERVK 0 1071 1 2463 39 3 3 chr2 4671801 4672084 -248584499 - AluY SINE Alu -28 283 1 467 312 40 6 chr2 4672896 4673069 -248583514 - MIR SINE MIR -26 236 58 334 274 150 65 chr2 4673581 4673921 -248582662 + MLT1E LTR MaLR 285 592 -1 273 270 108 9 chr2 4674006 4674117 -248582466 - MIR SINE MIR -59 149 28 654 228 206 9 chr2 4675241 4675460 -248581123 + MLT1L LTR MaLR 349 610 -5 497 298 44 39 chr2 4675562 4675767 -248580816 + MIR SINE MIR 47 252 -10 186 143 0 0 chr2 4676615 4676650 -248579933 + (CCCA)n Simple_repeat Simple_repeat 4 38 0 372 274 177 26 chr2 4677435 4677745 -248578838 + MARNA DNA Mariner 26 382 -204 837 274 95 3 chr2 4678527 4678906 -248577677 + L1MDa LINE L1 16 429 -6111 2243 201 52 17 chr2 4679141 4679659 -248576924 + L1MC1 LINE L1 5786 6321 -12 272 245 13 8 chr2 4679819 4679915 -248576668 - MLT1J2 LTR MaLR -309 141 70 323 158 11 116 chr2 4680038 4680104 -248576479 - L1PA15 LINE L1 -172 5993 5938 2336 86 3 29 chr2 4680104 4680418 -248576165 - AluSx SINE Alu -6 306 1 323 158 11 116 chr2 4680418 4680446 -248576137 - L1PA15 LINE L1 -227 5938 5909 948 153 25 0 chr2 4680454 4680617 -248575966 + L1PA15 LINE L1 5995 6161 -4 23 0 0 0 chr2 4680618 4680641 -248575942 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr2 4682810 4682854 -248573729 + AT_rich Low_complexity Low_complexity 1 44 0 2015 66 4 0 chr2 4683330 4683587 -248572996 - L1PA5 LINE L1 0 6154 5897 320 124 8 63 chr2 4683903 4683975 -248572608 + MLT1A2 LTR MaLR 1 67 -307 1578 222 18 0 chr2 4683978 4684311 -248572272 - MER47A DNA MER2_type 0 366 28 1210 198 62 21 chr2 4684328 4684616 -248571967 + MLT1A2 LTR MaLR 75 374 0 1637 126 20 0 chr2 4689347 4689594 -248566989 + MER1B DNA MER1_type 1 252 -87 293 259 77 21 chr2 4689710 4689853 -248566730 + ERVL LTR ERVL 2543 2693 -3071 569 210 109 0 chr2 4689893 4690031 -248566552 + MER58C DNA MER1_type 61 213 -2 365 314 26 0 chr2 4691076 4691232 -248565351 + ERVL LTR ERVL 3153 3312 -2342 358 154 15 70 chr2 4691364 4691712 -248564871 + (CTCA)n Simple_repeat Simple_repeat 1 328 0 431 329 7 0 chr2 4691976 4692131 -248564452 + ERVL LTR ERVL 3777 3932 -1832 255 145 197 40 chr2 4692406 4692449 -248564134 + LTR33A LTR ERVL 434 469 -54 15088 127 22 17 chr2 4692449 4694855 -248561728 - Tigger1 DNA MER2_type 0 2418 1 255 145 197 40 chr2 4694855 4694887 -248561696 + LTR33A LTR ERVL 469 521 -2 199 377 8 16 chr2 4694939 4695061 -248561522 - L2 LINE L2 -950 2364 2244 710 327 111 44 chr2 4695172 4696118 -248560465 + L1MEd LINE L1 79 1087 -5032 548 296 145 88 chr2 4696171 4697065 -248559518 + L1MEd LINE L1 1234 2178 -4132 564 89 0 0 chr2 4697218 4697297 -248559286 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 2370 156 19 28 chr2 4698155 4698352 -248558231 + MSTB LTR MaLR 2 199 -227 1881 124 6 70 chr2 4698352 4698496 -248558087 + AluSx SINE Alu 3 155 -157 2290 108 0 0 chr2 4698496 4698801 -248557782 + AluSx SINE Alu 1 305 -7 1881 124 6 70 chr2 4698801 4698986 -248557597 + AluSx SINE Alu 155 311 -1 2370 156 19 28 chr2 4698986 4699217 -248557366 + MSTB LTR MaLR 199 426 0 7793 184 61 9 chr2 4699219 4700787 -248555796 + MSTB-int LTR MaLR 3 1651 0 2023 162 70 15 chr2 4700787 4701189 -248555394 + MSTB LTR MaLR 1 424 -2 209 289 64 80 chr2 4701622 4701809 -248554774 - MIR3 SINE MIR -17 191 8 259 320 150 10 chr2 4702093 4702293 -248554290 + MIR SINE MIR 32 259 -3 2298 124 0 0 chr2 4702493 4702799 -248553784 + AluSx SINE Alu 1 306 -6 2531 131 48 15 chr2 4703065 4703638 -248552945 + MER4E LTR ERV1 1 756 -10 2475 209 48 52 chr2 4704514 4705226 -248551357 + L1MD2 LINE L1 5650 6358 -1 2303 107 13 0 chr2 4705362 4705662 -248550921 - AluSx SINE Alu -4 308 5 237 351 0 11 chr2 4705980 4706074 -248550509 + (CA)n Simple_repeat Simple_repeat 2 94 0 247 316 94 0 chr2 4706581 4706698 -248549885 + L2 LINE L2 3140 3267 -5 243 0 0 0 chr2 4709102 4709129 -248547454 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 803 257 72 61 chr2 4709813 4710307 -248546276 + L1ME LINE L1 28 5189 -957 2284 105 0 0 chr2 4710394 4710680 -248545903 + AluSg SINE Alu 1 286 -24 393 75 0 0 chr2 4710683 4710736 -248545847 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1202 234 49 28 chr2 4710753 4711196 -248545387 + L1ME LINE L1 5188 5638 -528 718 341 63 14 chr2 4711563 4712058 -248544525 + HERV16 LTR ERVL 1765 2283 -3481 716 347 63 6 chr2 4712131 4712494 -248544089 + HERV16 LTR ERVL 2357 2740 -2256 349 309 18 18 chr2 4712621 4712731 -248543852 + HERV16 LTR ERVL 2953 3062 -1934 428 336 77 6 chr2 4712792 4713155 -248543428 + HERV16 LTR ERVL 3143 3531 -1954 2153 164 59 82 chr2 4714036 4714596 -248541987 - L1MA8 LINE L1 -17 6274 5728 2214 62 29 0 chr2 4714868 4715168 -248541415 - AluSg SINE Alu 0 308 1 487 249 40 57 chr2 4715912 4716089 -248540494 - MIR3 SINE MIR -1 207 34 253 274 38 28 chr2 4717293 4717399 -248539184 + HERV16 LTR ERVL 2046 2152 -2844 313 163 35 47 chr2 4719299 4719385 -248537198 + MIR SINE MIR 60 144 -118 786 61 0 0 chr2 4721161 4721260 -248535323 - THE1A LTR MaLR -256 99 1 855 226 79 39 chr2 4721401 4721680 -248534903 - L1MB2 LINE L1 -53 6118 5829 926 170 0 0 chr2 4721760 4721901 -248534682 + AluJb SINE Alu 1 141 -171 2313 108 0 0 chr2 4721906 4722202 -248534381 + AluY SINE Alu 1 296 -15 2228 49 0 0 chr2 4722233 4722520 -248534063 + L1PA8 LINE L1 5885 6171 -1 1195 149 0 0 chr2 4722598 4722772 -248533811 + AluJb SINE Alu 129 302 -10 230 290 86 11 chr2 4722784 4722877 -248533706 - MLT1D LTR MaLR 0 505 406 * 889 251 146 25 chr2 4722872 4723278 -248533305 - MLT1E2 LTR MaLR -154 470 9 364 334 58 8 chr2 4723307 4723597 -248532986 - L2 LINE L2 -220 3052 2687 2940 197 20 6 chr2 4725846 4726497 -248530086 + L1MB3 LINE L1 5520 6179 -4 251 228 0 0 chr2 4726957 4727014 -248529569 + L1MB7 LINE L1 5350 5406 -764 233 186 0 0 chr2 4727049 4727092 -248529491 + L1MB7 LINE L1 5364 5406 -764 225 209 0 0 chr2 4727131 4727174 -248529409 + L1MB7 LINE L1 5364 5406 -764 1133 195 8 7 chr2 4727214 4727468 -248529115 + L1MB7 LINE L1 5363 5585 -599 2299 116 0 26 chr2 4727483 4727537 -248529046 - L1PB1 LINE L1 -2 6149 6095 2323 114 0 0 chr2 4727537 4727843 -248528740 - AluSx SINE Alu -6 306 1 2299 116 0 26 chr2 4727843 4728166 -248528417 - L1PB1 LINE L1 -56 6095 5782 419 234 43 21 chr2 4728166 4728251 -248528332 + L1MC4 LINE L1 6614 6703 -1339 1270 73 0 6 chr2 4728251 4728428 -248528155 - L1PB1 LINE L1 -359 5792 5617 * 1798 251 38 36 chr2 4728423 4728827 -248527756 + L1MB7 LINE L1 5591 5998 -186 1704 122 35 52 chr2 4728827 4729113 -248527470 + AluJb SINE Alu 6 286 -26 1798 251 38 36 chr2 4729113 4729289 -248527294 + L1MB7 LINE L1 5998 6172 -12 2246 93 0 0 chr2 4729326 4729605 -248526978 - AluSc SINE Alu -30 279 1 506 237 0 0 chr2 4730356 4730610 -248525973 + (CA)n Simple_repeat Simple_repeat 1 254 0 195 250 0 0 chr2 4730634 4730734 -248525849 + (CA)n Simple_repeat Simple_repeat 1 100 0 336 222 3 45 chr2 4730782 4731163 -248525420 + (CA)n Simple_repeat Simple_repeat 1 364 0 200 275 17 6 chr2 4731218 4731396 -248525187 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 290 196 0 chr2 4732123 4732261 -248524322 - MIR SINE MIR -20 242 78 288 295 95 0 chr2 4734601 4734706 -248521877 + L2 LINE L2 3108 3222 -50 280 252 0 15 chr2 4736365 4736496 -248520087 + (CA)n Simple_repeat Simple_repeat 1 129 0 566 268 82 55 chr2 4737023 4737243 -248519340 + MIR SINE MIR 20 245 -17 353 336 34 0 chr2 4738723 4738872 -248517711 + MIR SINE MIR 58 211 -51 412 280 177 0 chr2 4739128 4739303 -248517280 + MIR SINE MIR 57 262 0 8801 101 4 4 chr2 4940978 4942261 -248314322 - L1P LINE L1 -1759 4387 3105 205 196 11 11 chr2 4942363 4942455 -248314128 + (CATTC)n Satellite Satellite 3 94 0 731 175 0 29 chr2 4942466 4942986 -248313597 + (CATTC)n Satellite Satellite 1 505 0 709 177 2 2 chr2 4943040 4943546 -248313037 + (CATTC)n Satellite Satellite 1 506 0 389 178 8 0 chr2 4943559 4943677 -248312906 + (CATTC)n Satellite Satellite 3 121 0 181 266 166 71 chr2 4944325 4944633 -248311950 - L3 LINE CR1 -246 1331 995 366 42 0 0 chr2 4944723 4944771 -248311812 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr2 4944808 4944846 -248311737 + AT_rich Low_complexity Low_complexity 1 38 0 422 264 4 16 chr2 4944870 4945113 -248311470 - L1MA9 LINE L1 -38 6274 5989 228 67 0 0 chr2 4945260 4945290 -248311293 + (TA)n Simple_repeat Simple_repeat 2 31 0 2242 108 0 0 chr2 4945973 4946270 -248310313 + AluSg SINE Alu 6 302 -8 27 29 0 0 chr2 4946270 4946304 -248310279 + AT_rich Low_complexity Low_complexity 1 34 0 290 247 47 12 chr2 4946571 4946656 -248309927 + MIR SINE MIR 104 191 -71 415 217 12 12 chr2 4946667 4946750 -248309833 + MER30 DNA MER1_type 148 230 0 265 312 35 29 chr2 4946767 4946940 -248309643 + L1MEc LINE L1 1908 2081 -4315 763 216 161 6 chr2 4947100 4947421 -248309162 - Tigger6 DNA MER2_type 0 1597 1148 11792 153 32 5 chr2 4947465 4947798 -248308785 + Tigger1 DNA MER2_type 1 324 -2094 2183 125 143 8 chr2 4947798 4948175 -248308408 + MSTA LTR MaLR 1 428 0 11792 153 32 5 chr2 4948175 4949821 -248306762 + Tigger1 DNA MER2_type 324 2033 -385 3554 194 28 14 chr2 4949922 4951145 -248305438 - L1MA9 LINE L1 -432 5880 4636 1651 174 57 3 chr2 4951145 4951427 -248305156 + AluSp SINE Alu 1 297 -16 3554 194 28 14 chr2 4951427 4951555 -248305028 - L1MA9 LINE L1 -1676 4636 4511 293 0 27 0 chr2 4951557 4951594 -248304989 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4582 17 0 0 chr2 4951594 4952116 -248304467 - L1PA2 LINE L1 -13 6142 5621 3081 15 0 0 chr2 4952116 4952503 -248304080 + L1PA2 LINE L1 5227 5613 -542 1227 183 28 37 chr2 4952499 4952694 -248303889 - L1MA9 LINE L1 -1624 4522 4330 * 2159 122 0 0 chr2 4952694 4952989 -248303594 + AluSx SINE Alu 11 305 -7 1227 183 28 37 chr2 4952989 4953115 -248303468 - L1MA9 LINE L1 -1816 4330 4204 368 241 127 16 chr2 4953323 4953568 -248303015 - L1M4 LINE L1 -3070 3076 2805 308 347 141 38 chr2 4954080 4954449 -248302134 - L2 LINE L2 -4 3268 2862 1711 164 66 101 chr2 4954659 4955085 -248301498 - MSTB LTR MaLR -15 411 1 359 352 73 24 chr2 4955671 4955918 -248300665 - L2 LINE L2 -468 2846 2588 1106 264 151 37 chr2 4955932 4956352 -248300231 + MLT2B1 LTR ERVL 3 482 -38 955 89 13 0 chr2 4956352 4956509 -248300074 + (TCTA)n Simple_repeat Simple_repeat 4 162 0 1106 264 151 37 chr2 4956509 4956553 -248300030 + MLT2B1 LTR ERVL 482 520 0 3531 176 42 90 chr2 4956906 4958177 -248298406 + L1PB3 LINE L1 4942 6154 0 2185 92 0 7 chr2 4959126 4959420 -248297163 + AluSc SINE Alu 1 292 -17 249 378 44 7 chr2 4960035 4960170 -248296413 + MIR SINE MIR 46 185 -77 206 62 31 0 chr2 4960366 4960398 -248296185 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 243 136 45 0 chr2 4960399 4960443 -248296140 - MER5B DNA MER1_type -132 46 1 327 280 64 45 chr2 4960471 4960628 -248295955 - MER105 DNA DNA -1 203 44 457 282 48 62 chr2 4960692 4960901 -248295682 + MER63A DNA MER1_type 2 207 -3 200 322 67 22 chr2 4961474 4961564 -248295019 + L3 LINE CR1 1169 1262 -315 432 294 32 24 chr2 4961666 4961792 -248294791 + L3 LINE CR1 1450 1576 -1 607 116 45 18 chr2 4962161 4962273 -248294310 + L1PB2 LINE L1 5677 5791 -360 254 160 13 53 chr2 4962385 4962460 -248294123 + (TA)n Simple_repeat Simple_repeat 1 72 0 2175 97 54 26 chr2 4962461 4962810 -248293773 + L1PB2 LINE L1 5789 6147 -4 1698 130 85 4 chr2 4963439 4963709 -248292874 - AluSx SINE Alu -12 300 9 315 273 0 0 chr2 4964166 4964243 -248292340 - L1MC4 LINE L1 -1350 6692 6616 27 29 0 0 chr2 4964276 4964310 -248292273 + AT_rich Low_complexity Low_complexity 1 34 0 184 344 16 88 chr2 4964373 4964498 -248292085 - MIR SINE MIR -59 149 34 24 32 0 0 chr2 4965141 4965172 -248291411 + AT_rich Low_complexity Low_complexity 1 31 0 207 315 82 86 chr2 4966441 4966708 -248289875 + L2 LINE L2 2228 2493 -821 229 316 158 8 chr2 4966774 4966907 -248289676 - MIR SINE MIR 0 262 110 234 354 85 0 chr2 4967099 4967181 -248289402 - L2 LINE L2 -12 3260 3172 27 0 0 0 chr2 4968740 4968767 -248287816 + AT_rich Low_complexity Low_complexity 1 27 0 6776 70 13 1 chr2 4969740 4971311 -248285272 - L1PA7 LINE L1 -4 6150 4564 16969 29 0 0 chr2 4971411 4974195 -248282388 + L1PA2 LINE L1 3372 6155 0 29 47 0 0 chr2 4974576 4974619 -248281964 + AT_rich Low_complexity Low_complexity 1 43 0 190 308 199 13 chr2 4975084 4975240 -248281343 + MIR SINE MIR 37 221 -41 220 363 12 0 chr2 4975476 4975556 -248281027 - L2 LINE L2 -212 3060 2980 1533 200 64 6 chr2 4977053 4977398 -248279185 + MLT2D LTR ERVL 1 365 -49 280 228 51 13 chr2 4978366 4978445 -248278138 + MIR SINE MIR 110 191 -71 944 270 58 70 chr2 4978961 4979461 -248277122 + MLT1L LTR MaLR 79 572 -43 792 253 13 17 chr2 4979946 4980179 -248276404 - MER72 LTR ERV1 -243 479 248 206 313 50 38 chr2 4981813 4981893 -248274690 - L2 LINE L2 -5 3267 3187 289 258 0 0 chr2 4982324 4982417 -248274166 - Charlie7 DNA MER1_type -1937 675 583 435 218 122 20 chr2 4982482 4982629 -248273954 - Charlie7 DNA MER1_type -2130 482 321 23 78 0 0 chr2 4982766 4982817 -248273766 + AT_rich Low_complexity Low_complexity 1 51 0 357 314 47 23 chr2 4983591 4983763 -248272820 + MIR SINE MIR 28 203 -59 875 254 6 0 chr2 4984510 4984691 -248271892 + MER5A DNA MER1_type 8 189 0 224 254 51 0 chr2 4985159 4985218 -248271365 - MIR SINE MIR -55 153 92 34 65 0 0 chr2 4985572 4985634 -248270949 + AT_rich Low_complexity Low_complexity 1 62 0 214 278 11 78 chr2 4985688 4985778 -248270805 + L2 LINE L2 3189 3272 0 1492 204 6 19 chr2 4987094 4987407 -248269176 - AluJb SINE Alu -1 311 3 255 247 78 26 chr2 4987447 4987524 -248269059 - MIR SINE MIR -179 83 3 255 321 46 30 chr2 4987646 4987777 -248268806 + MIR SINE MIR 99 231 -31 279 315 94 26 chr2 4990277 4990544 -248266039 - L1MEc LINE L1 -4579 1817 1533 675 212 0 0 chr2 4990565 4990683 -248265900 + FLAM_C SINE Alu 1 118 -15 319 270 86 40 chr2 4990828 4991002 -248265581 - L1M4 LINE L1 -2281 3865 3684 337 320 99 41 chr2 4991088 4991453 -248265130 - L1M4 LINE L1 -2642 3504 3119 289 289 41 38 chr2 4991966 4992232 -248264351 - L1M4 LINE L1 -3523 2623 2357 457 341 102 23 chr2 4994270 4994751 -248261832 - L1ME4a LINE L1 -24 6097 5579 1109 254 0 0 chr2 4994830 4995070 -248261513 + MLT1A1 LTR MaLR 125 364 -1 2131 155 111 5 chr2 4995225 4995612 -248260971 - MSTA LTR MaLR 0 428 1 8336 193 25 11 chr2 4995612 4997241 -248259342 - MSTA-int LTR MaLR 0 1651 1 1562 202 141 5 chr2 4997241 4997618 -248258965 - MSTA LTR MaLR 0 428 1 3523 278 49 43 chr2 4999175 4999235 -248257348 + L1M4 LINE L1 11 69 -6786 1572 206 0 3 chr2 4999235 4999547 -248257036 - AluJo SINE Alu 0 311 1 3523 278 49 43 chr2 4999547 5001235 -248255348 + L1M4 LINE L1 69 1792 -5063 1035 242 50 108 chr2 5001242 5002420 -248254163 + L1M4 LINE L1 2230 3265 -3692 1131 256 99 11 chr2 5002566 5002613 -248253970 + L1M4 LINE L1 3245 3286 -3671 4195 39 8 2 chr2 5002613 5003153 -248253430 + L1PA4 LINE L1 5621 6163 0 1131 256 99 11 chr2 5003153 5003628 -248252955 + L1M4 LINE L1 3286 3814 -3143 2727 225 19 0 chr2 5003691 5004203 -248252380 + L1P4 LINE L1 53 574 -6265 * 3594 228 50 27 chr2 5004192 5005348 -248251235 + L1P4 LINE L1 1849 3031 -3818 4035 203 48 14 chr2 5005348 5005617 -248250966 + L1P4 LINE L1 4935 5193 -1671 1825 176 80 5 chr2 5005617 5006015 -248250568 + MSTA LTR MaLR 1 428 0 4035 203 48 14 chr2 5006015 5006936 -248249647 + L1P4 LINE L1 5193 6163 -701 5011 148 17 1 chr2 5007036 5007869 -248248714 + L1PA16 LINE L1 5312 6157 -9 444 311 12 38 chr2 5007891 5008316 -248248267 + L1M4 LINE L1 3866 4279 -2678 2684 36 0 3 chr2 5008535 5008844 -248247739 - AluY SINE Alu -3 308 1 3987 20 0 0 chr2 5009235 5009693 -248246890 - L1PA3 LINE L1 0 6155 5698 5105 30 0 0 chr2 5009693 5010317 -248246266 + L1P LINE L1 4749 5372 -774 3297 137 32 35 chr2 5010880 5011480 -248245103 - Tigger1 DNA MER2_type 0 2418 1821 1585 85 89 4 chr2 5012347 5012593 -248243990 - L1PA11 LINE L1 -10 6164 5898 5661 156 60 9 chr2 5012593 5012708 -248243875 - Tigger1 DNA MER2_type -581 1837 1729 207 0 0 0 chr2 5012708 5012731 -248243852 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5661 156 60 9 chr2 5012731 5014316 -248242267 - Tigger1 DNA MER2_type -689 1729 1 1651 201 3 7 chr2 5014349 5014647 -248241936 - AluJo SINE Alu -15 297 1 565 278 91 13 chr2 5014943 5015173 -248241410 - MLT1D LTR MaLR 0 505 258 307 294 134 21 chr2 5015287 5015481 -248241102 - LTR33 LTR ERVL -1 520 305 808 219 18 0 chr2 5015661 5015825 -248240758 - FRAM SINE Alu -9 167 1 241 295 79 43 chr2 5018061 5018200 -248238383 + L2 LINE L2 3128 3271 -1 317 185 64 25 chr2 5018240 5018397 -248238186 + (TG)n Simple_repeat Simple_repeat 1 163 0 216 47 78 47 chr2 5018407 5018471 -248238112 + (GTGTG)n Simple_repeat Simple_repeat 4 69 0 482 131 48 51 chr2 5018527 5018820 -248237763 + (GTGTG)n Simple_repeat Simple_repeat 1 292 0 437 97 30 67 chr2 5018833 5018998 -248237585 + (GTGTG)n Simple_repeat Simple_repeat 1 159 0 1135 218 44 21 chr2 5019506 5019840 -248236743 - MLT1A1 LTR MaLR -6 359 3 3801 182 14 7 chr2 5019928 5020638 -248235945 - MER72 LTR ERV1 0 722 8 332 133 84 12 chr2 5021558 5021641 -248234942 - L1P LINE L1 -2914 3232 3144 21 36 0 0 chr2 5021775 5021803 -248234780 + AT_rich Low_complexity Low_complexity 1 28 0 435 294 91 67 chr2 5022113 5022691 -248233892 - L1MC4 LINE L1 0 8042 7311 670 217 88 17 chr2 5022713 5023035 -248233548 + MLT1C LTR MaLR 1 373 -94 228 135 19 58 chr2 5023039 5023091 -248233492 + MLT1C LTR MaLR 336 385 -5 2814 131 7 0 chr2 5023096 5023523 -248233060 + MER57B LTR ERV1 5 434 0 234 261 143 62 chr2 5023567 5023728 -248232855 - L1MC4a LINE L1 -470 7338 7165 687 291 82 12 chr2 5023995 5024325 -248232258 - L1MC4 LINE L1 -985 7057 6705 1878 114 0 84 chr2 5024889 5025232 -248231351 - AluSx SINE Alu 0 317 1 748 221 63 0 chr2 5027377 5027535 -248229048 - FAM SINE Alu -7 168 1 357 222 28 46 chr2 5027952 5028060 -248228523 + MIR3 SINE MIR 97 202 -6 284 330 31 10 chr2 5028210 5028307 -248228276 + L2 LINE L2 3188 3286 -27 403 323 64 30 chr2 5028926 5029192 -248227391 - L1MEc LINE L1 -1800 4415 4141 654 304 48 23 chr2 5029316 5029881 -248226702 - L1MEc LINE L1 -2708 3507 2929 631 297 42 0 chr2 5029903 5030068 -248226515 + MER5A DNA MER1_type 4 175 -14 276 340 55 12 chr2 5030169 5030422 -248226161 - L1MEc LINE L1 -3427 2788 2525 2872 229 74 6 chr2 5030452 5031517 -248225066 - L1MB8 LINE L1 -14 6164 5027 31 0 0 0 chr2 5031520 5031551 -248225032 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 117 10 chr2 5031581 5032068 -248224515 - L1MB8 LINE L1 -3486 2660 2122 517 269 39 6 chr2 5032122 5032278 -248224305 - L1MEc LINE L1 -4670 1726 1566 30 77 0 0 chr2 5033687 5033752 -248222831 + AT_rich Low_complexity Low_complexity 1 65 0 355 258 106 26 chr2 5034112 5034263 -248222320 - L1MEc LINE L1 -4913 1292 1130 2684 98 8 11 chr2 5034275 5034651 -248221932 - THE1C LTR MaLR 0 375 1 6831 113 39 137 chr2 5034678 5035540 -248221043 - THE1C-int LTR MaLR -303 1277 607 412 126 0 105 chr2 5035540 5035635 -248220948 - L1PA10 LINE L1 0 6168 6084 6831 113 39 137 chr2 5035635 5036188 -248220395 - THE1C-int LTR MaLR -973 607 1 2390 133 30 11 chr2 5036188 5036556 -248220027 - THE1C LTR MaLR 0 375 1 385 274 73 66 chr2 5036797 5037056 -248219527 - L1MEc LINE L1 -5278 927 667 2421 178 24 2 chr2 5037210 5037627 -248218956 + MSTB LTR MaLR 1 426 0 1226 225 107 24 chr2 5038405 5038743 -248217840 + MLT1B LTR MaLR 1 366 -24 1106 226 13 57 chr2 5038751 5039052 -248217531 + MLT1A2 LTR MaLR 74 361 -13 2327 110 0 0 chr2 5039323 5039633 -248216950 - AluSx SINE Alu -2 310 1 606 315 36 9 chr2 5039826 5040045 -248216538 - MIR SINE MIR -32 230 6 276 77 0 0 chr2 5041244 5041283 -248215300 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 215 329 89 13 chr2 5043034 5043113 -248213470 + MIR SINE MIR 25 109 -153 272 309 9 27 chr2 5044410 5044520 -248212063 - MLT1F LTR MaLR -82 460 353 521 252 65 0 chr2 5044603 5044742 -248211841 + MSTD LTR MaLR 1 148 -217 668 178 17 0 chr2 5044773 5044891 -248211692 + MSTD LTR MaLR 265 384 -12 429 320 35 58 chr2 5044970 5045229 -248211354 + MIR SINE MIR 10 262 0 200 294 11 43 chr2 5046164 5046348 -248210235 + (CATG)n Simple_repeat Simple_repeat 1 178 0 188 229 42 0 chr2 5048458 5048506 -248208077 - MIR3 SINE MIR -39 169 120 198 103 0 0 chr2 5048921 5048950 -248207633 + (TC)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr2 5049003 5049038 -248207545 + (CA)n Simple_repeat Simple_repeat 2 36 0 1924 186 38 22 chr2 5049807 5050254 -248206329 - L1MA8 LINE L1 -6 6285 5832 2183 157 10 15 chr2 5050254 5050643 -248205940 + L1MA8 LINE L1 5450 5836 -476 1670 146 143 32 chr2 5050726 5051069 -248205514 + MSTA LTR MaLR 19 399 -29 288 0 0 0 chr2 5051069 5051101 -248205482 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5279 91 5 11 chr2 5051101 5051852 -248204731 - L1PA8 LINE L1 -11 6161 5415 525 77 0 0 chr2 5052330 5052395 -248204188 - MER30B DNA MER1_type -125 65 1 342 0 0 0 chr2 5052575 5052613 -248203970 + (TA)n Simple_repeat Simple_repeat 2 39 0 182 292 0 0 chr2 5054653 5054701 -248201882 + L2 LINE L2 3210 3257 -15 1831 214 82 52 chr2 5055380 5055488 -248201095 - L1ME1 LINE L1 -237 5998 5895 1951 125 3 30 chr2 5055488 5055784 -248200799 - AluSx SINE Alu -7 305 18 1831 214 82 52 chr2 5055784 5056238 -248200345 - L1ME1 LINE L1 -340 5895 5456 1925 148 0 0 chr2 5056238 5056544 -248200039 - AluSx SINE Alu 0 306 1 1831 214 82 52 chr2 5056544 5056924 -248199659 - L1ME1 LINE L1 -779 5456 5012 1151 279 38 18 chr2 5056920 5057468 -248199115 - L1ME1 LINE L1 -1647 4568 4010 * 274 269 19 28 chr2 5057842 5057950 -248198633 - L1M4 LINE L1 -969 5177 5071 2831 274 66 37 chr2 5058211 5059995 -248196588 - L1ME1 LINE L1 -2309 3906 2063 315 49 0 0 chr2 5059995 5060036 -248196547 + (TG)n Simple_repeat Simple_repeat 2 42 0 2831 274 66 37 chr2 5060036 5061154 -248195429 - L1ME1 LINE L1 -4152 2063 979 358 324 41 82 chr2 5061176 5061617 -248194966 - L1ME1 LINE L1 -5453 943 521 184 185 37 0 chr2 5063234 5063288 -248193295 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2239 108 3 0 chr2 5063627 5063924 -248192659 + AluSx SINE Alu 1 298 -14 465 342 129 32 chr2 5064225 5065055 -248191528 - L2 LINE L2 -653 2661 1752 286 278 35 28 chr2 5065183 5065327 -248191256 + L1MB8 LINE L1 93 237 -6622 305 301 65 75 chr2 5065814 5066000 -248190583 + L1MB8 LINE L1 1253 1436 -5511 1603 161 68 37 chr2 5066065 5066389 -248190194 + MER1B DNA MER1_type 4 337 0 1500 288 87 23 chr2 5066412 5067172 -248189411 + L1MB8 LINE L1 1380 2209 -4750 1805 167 7 10 chr2 5067172 5067472 -248189111 + AluJo SINE Alu 1 299 -13 1500 288 87 23 chr2 5067472 5067616 -248188967 + L1MB8 LINE L1 2209 2342 -4617 192 125 0 0 chr2 5067739 5067771 -248188812 + (CA)n Simple_repeat Simple_repeat 1 32 0 1497 270 80 32 chr2 5067912 5069184 -248187399 + L1MB8 LINE L1 2619 3927 -3030 * 1988 212 75 8 chr2 5069162 5069685 -248186898 + L1MB8 LINE L1 6197 6754 -235 1791 137 0 50 chr2 5069751 5070079 -248186504 - AluSq SINE Alu 0 313 1 2330 99 3 3 chr2 5071743 5072047 -248184536 + AluSp SINE Alu 1 304 -9 226 272 150 27 chr2 5072358 5072505 -248184078 + MIR SINE MIR 73 237 -25 342 247 139 38 chr2 5072789 5072947 -248183636 - MIR SINE MIR -42 220 47 1807 231 73 47 chr2 5072952 5073568 -248183015 + L1MC3 LINE L1 7153 7784 -1 2007 99 21 18 chr2 5073920 5074242 -248182341 + AluSg SINE Alu 1 323 0 857 161 61 11 chr2 5074345 5074525 -248182058 - L1MA8 LINE L1 -100 6191 6003 359 294 73 34 chr2 5075683 5075860 -248180723 - MIR SINE MIR 0 262 79 481 55 27 0 chr2 5075890 5075963 -248180620 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1268 219 91 17 chr2 5076022 5076373 -248180210 - MLT2C1 LTR ERVL -20 377 1 1653 210 3 0 chr2 5076651 5076942 -248179641 + AluJo SINE Alu 1 292 -20 306 314 0 0 chr2 5076947 5077033 -248179550 - L1MC4 LINE L1 -1343 6699 6614 204 200 0 0 chr2 5077037 5077082 -248179501 + (TA)n Simple_repeat Simple_repeat 1 45 0 1108 192 39 13 chr2 5077109 5077338 -248179245 - MER46A DNA MER2_type -1 235 1 2032 154 3 0 chr2 5077541 5077846 -248178737 + AluSq SINE Alu 1 306 -7 356 250 21 21 chr2 5077847 5077987 -248178596 - L1MC4 LINE L1 -1 8041 7902 248 245 0 0 chr2 5077988 5078041 -248178542 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 239 214 0 0 chr2 5078041 5078097 -248178486 - L1MC4 LINE L1 -1339 6703 6648 472 248 18 69 chr2 5078130 5078362 -248178221 - L1MC4 LINE L1 -100 7708 7585 218 289 0 24 chr2 5080029 5080112 -248176471 + CT-rich Low_complexity Low_complexity 2 82 0 569 362 138 23 chr2 5080144 5080485 -248176098 - L2 LINE L2 -2064 1250 829 1307 137 64 0 chr2 5080485 5080704 -248175879 - L1PA11 LINE L1 -2 6172 5940 569 362 138 23 chr2 5080704 5080876 -248175707 - L2 LINE L2 -2485 829 678 1605 181 6 33 chr2 5081288 5081361 -248175222 - L1MC2 LINE L1 -16 6328 6255 2254 118 37 11 chr2 5081361 5081716 -248174867 + THE1B LTR MaLR 1 364 0 1605 181 6 33 chr2 5081716 5081974 -248174609 - L1MC2 LINE L1 -89 6255 6006 508 286 158 22 chr2 5082156 5082467 -248174116 + LTR16A LTR ERVL 93 445 -5 888 186 0 13 chr2 5082915 5083071 -248173512 - FRAM SINE Alu -17 159 6 300 191 0 44 chr2 5084461 5084597 -248171986 + (TA)n Simple_repeat Simple_repeat 2 131 0 1584 207 13 10 chr2 5086815 5087115 -248169468 + AluJb SINE Alu 1 301 -11 24 0 0 0 chr2 5087432 5087456 -248169127 + AT_rich Low_complexity Low_complexity 1 24 0 1944 152 39 17 chr2 5087483 5087839 -248168744 - THE1B LTR MaLR 0 364 1 1592 127 0 9 chr2 5088630 5088859 -248167724 - AluSg/x SINE Alu -8 302 76 888 258 24 0 chr2 5089351 5089560 -248167023 + MER20 DNA MER1_type 6 219 0 458 227 47 7 chr2 5090104 5090254 -248166329 + Charlie5 DNA MER1_type 2469 2624 0 306 0 0 0 chr2 5090886 5090920 -248165663 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 529 217 83 64 chr2 5090921 5091078 -248165505 + AluJb SINE Alu 136 295 -17 1645 121 22 0 chr2 5095837 5096068 -248160515 - AluSx SINE Alu -14 298 63 246 273 175 13 chr2 5096961 5097115 -248159468 - L1MC2 LINE L1 -2055 5753 5575 337 278 151 50 chr2 5097192 5097630 -248158953 + L1M4 LINE L1 3346 3863 -2283 2144 110 0 23 chr2 5097630 5097938 -248158645 + AluSg SINE Alu 1 301 -9 337 278 151 50 chr2 5097938 5098103 -248158480 + L1M4 LINE L1 3863 4010 -2136 224 209 0 0 chr2 5099956 5099999 -248156584 + GA-rich Low_complexity Low_complexity 1 43 0 2342 206 49 0 chr2 5100036 5100527 -248156056 - MLT2B2 LTR ERVL 0 515 1 180 125 0 0 chr2 5100751 5100783 -248155800 + (A)n Simple_repeat Simple_repeat 1 32 0 334 310 78 49 chr2 5100890 5101174 -248155409 - L1MC4a LINE L1 -1849 5959 5668 202 296 70 0 chr2 5101517 5101588 -248154995 - MIR SINE MIR -165 97 22 23 0 0 0 chr2 5102058 5102081 -248154502 + AT_rich Low_complexity Low_complexity 1 23 0 2385 96 0 0 chr2 5103239 5103541 -248153042 - AluSg SINE Alu -8 302 1 2088 150 0 0 chr2 5104647 5104947 -248151636 - AluSx SINE Alu -11 301 2 195 42 0 0 chr2 5106123 5106147 -248150436 + (T)n Simple_repeat Simple_repeat 1 24 0 336 209 77 44 chr2 5106376 5106467 -248150116 - L2 LINE L2 -20 3252 3159 227 360 12 12 chr2 5106637 5106723 -248149860 + L2 LINE L2 3227 3312 -1 206 327 72 39 chr2 5107012 5107220 -248149363 - L2 LINE L2 -1 3312 3098 488 205 60 30 chr2 5107543 5107709 -248148874 - MER58C DNA MER1_type -16 199 29 209 196 0 22 chr2 5107802 5107848 -248148735 + CT-rich Low_complexity Low_complexity 3 47 0 242 292 35 53 chr2 5108283 5108396 -248148187 + MIR SINE MIR 46 156 -106 4459 228 75 92 chr2 5109025 5111916 -248144667 + L1ME3A LINE L1 2194 5035 -1111 357 251 18 90 chr2 5111932 5112054 -248144529 + L1ME3A LINE L1 5772 5880 -290 1804 187 7 0 chr2 5112054 5112359 -248144224 + AluJb SINE Alu 1 307 -5 357 251 18 90 chr2 5112359 5112403 -248144180 + L1ME3A LINE L1 5880 5926 -244 556 228 122 6 chr2 5113028 5113208 -248143375 + MLT1J LTR MaLR 1 201 -310 244 252 205 39 chr2 5113523 5113650 -248142933 + MLT1J LTR MaLR 356 503 -8 426 307 95 35 chr2 5114276 5114592 -248141991 + LTR16C LTR ERVL 146 480 -11 27 0 0 0 chr2 5114625 5114652 -248141931 + AT_rich Low_complexity Low_complexity 1 27 0 189 309 81 24 chr2 5115004 5115127 -248141456 - MIR SINE MIR -14 248 119 2478 108 8 5 chr2 5115514 5115885 -248140698 - L1PA14 LINE L1 -3 6158 5787 283 315 72 9 chr2 5115898 5116009 -248140574 - MIR SINE MIR -60 148 31 200 208 0 38 chr2 5116177 5116230 -248140353 + CT-rich Low_complexity Low_complexity 4 54 0 221 307 94 45 chr2 5116450 5116694 -248139889 - L2 LINE L2 -354 2960 2705 192 356 87 67 chr2 5117094 5117347 -248139236 + L2 LINE L2 2953 3210 -62 306 294 61 81 chr2 5119043 5119240 -248137343 - MIR3 SINE MIR -9 199 7 28 0 0 0 chr2 5119248 5119276 -248137307 + AT_rich Low_complexity Low_complexity 1 28 0 202 283 0 0 chr2 5119426 5119486 -248137097 + (CATA)n Simple_repeat Simple_repeat 3 62 0 443 339 155 13 chr2 5119529 5119904 -248136679 - L3 LINE CR1 -112 1465 1038 351 0 0 0 chr2 5120008 5120047 -248136536 + (CA)n Simple_repeat Simple_repeat 2 40 0 182 262 107 0 chr2 5120241 5120325 -248136258 - L3 LINE CR1 -858 719 627 29 28 0 0 chr2 5120416 5120452 -248136131 + AT_rich Low_complexity Low_complexity 1 36 0 7904 94 0 0 chr2 5120965 5122058 -248134525 - L1P3 LINE L1 -4788 1673 581 6912 109 7 12 chr2 5122055 5123154 -248133429 + L1P LINE L1 1936 3029 -3117 * 2930 176 4 13 chr2 5123448 5123993 -248132590 - L1PA16 LINE L1 -10 6156 5617 2430 174 70 42 chr2 5124037 5124359 -248132224 - MLT2B3 LTR ERVL -8 546 202 207 0 0 0 chr2 5124359 5124382 -248132201 + (GA)n Simple_repeat Simple_repeat 2 24 0 2430 174 70 42 chr2 5124382 5124589 -248131994 - MLT2B3 LTR ERVL -352 202 2 3663 245 31 27 chr2 5124616 5126347 -248130236 + L1MB7 LINE L1 3997 5754 -430 559 77 26 0 chr2 5126347 5126425 -248130158 + MADE1 DNA Mariner 1 80 0 3663 245 31 27 chr2 5126425 5126758 -248129825 + L1MB7 LINE L1 5754 6084 -100 319 323 90 26 chr2 5127187 5127376 -248129207 + MIR SINE MIR 11 211 -51 419 291 99 6 chr2 5127540 5127722 -248128861 - LTR50 LTR ERVL -126 669 471 466 246 123 45 chr2 5127792 5128036 -248128547 - LTR50 LTR ERVL -532 263 1 1874 159 11 0 chr2 5128275 5128558 -248128025 + AluSx SINE Alu 1 286 -26 3914 157 24 10 chr2 5128807 5129520 -248127063 + MER50 LTR ERV1 1 723 -11 689 297 53 28 chr2 5129625 5130022 -248126561 + LTR16B LTR ERVL 37 443 -21 3384 200 67 4 chr2 5130073 5130849 -248125734 - L1MB8 LINE L1 -6 6172 5348 1403 147 0 32 chr2 5130885 5131103 -248125480 - AluSg/x SINE Alu -16 296 86 273 226 0 0 chr2 5131103 5131156 -248125427 - L1M4b LINE L1 -5898 961 909 471 218 0 10 chr2 5131165 5131266 -248125317 + Tigger2a DNA MER2_type 1 100 -334 2042 234 102 22 chr2 5131266 5131936 -248124647 - MER50 LTR ERV1 0 734 12 2105 149 6 3 chr2 5131940 5132290 -248124293 + Tigger2a DNA MER2_type 94 444 0 757 305 59 25 chr2 5132301 5132708 -248123875 - L1M4b LINE L1 -5968 891 471 444 282 169 23 chr2 5132746 5133012 -248123571 - L1M4b LINE L1 -6480 379 75 243 304 29 0 chr2 5133483 5133552 -248123031 - MIR3 SINE MIR -27 181 111 342 256 277 0 chr2 5133784 5133921 -248122662 + MER5B DNA MER1_type 1 175 -3 269 303 111 0 chr2 5134735 5134834 -248121749 - MIR SINE MIR -61 147 38 236 309 48 40 chr2 5134858 5134984 -248121599 + L2 LINE L2 3144 3270 -2 435 343 48 6 chr2 5135304 5135470 -248121113 + MER5B DNA MER1_type 6 178 0 758 154 155 2 chr2 5137465 5137688 -248118895 + L1MA9 LINE L1 6055 6312 0 2152 102 78 90 chr2 5137781 5138214 -248118369 + MSTA LTR MaLR 1 428 0 333 118 0 0 chr2 5138314 5138325 -248118258 + (TG)n Simple_repeat Simple_repeat 1 62 0 333 118 0 0 chr2 5138325 5138376 -248118207 + (TG)n Simple_repeat Simple_repeat 2 52 0 492 311 53 21 chr2 5139635 5139825 -248116758 - MIR SINE MIR -44 218 23 2576 162 80 53 chr2 5139947 5140534 -248116049 - MER6A DNA MER2_type 0 605 3 636 270 76 8 chr2 5140780 5140988 -248115595 - MIR SINE MIR -49 213 1 21 0 0 0 chr2 5141230 5141251 -248115332 + AT_rich Low_complexity Low_complexity 1 21 0 286 286 29 6 chr2 5142551 5142726 -248113857 + (TA)n Simple_repeat Simple_repeat 2 180 0 207 0 0 0 chr2 5142854 5142877 -248113706 + (A)n Simple_repeat Simple_repeat 1 23 0 2053 121 16 7 chr2 5143143 5143472 -248113111 + AluSx SINE Alu 1 312 0 328 299 142 0 chr2 5143569 5143703 -248112880 - MIR SINE MIR -5 257 105 223 200 17 17 chr2 5143728 5143788 -248112795 + T-rich Low_complexity Low_complexity 1 60 0 29 47 0 0 chr2 5144378 5144421 -248112162 + AT_rich Low_complexity Low_complexity 1 43 0 2593 40 0 0 chr2 5146204 5146501 -248110082 - AluY SINE Alu -14 297 1 351 107 40 0 chr2 5147230 5147305 -248109278 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 39 0 0 chr2 5147805 5147831 -248108752 + (T)n Simple_repeat Simple_repeat 1 26 0 1165 225 40 25 chr2 5147905 5148230 -248108353 - MER93a LTR ERV1 -10 392 63 336 167 0 0 chr2 5148338 5148410 -248108173 + T-rich Low_complexity Low_complexity 1 72 0 241 466 8 0 chr2 5149022 5149140 -248107443 + L2 LINE L2 3141 3259 -13 33 25 0 0 chr2 5149533 5149573 -248107010 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 5149773 5149795 -248106788 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 5151015 5151037 -248105546 + AT_rich Low_complexity Low_complexity 1 22 0 2542 62 0 0 chr2 5151683 5151992 -248104591 - AluY SINE Alu -2 309 1 197 143 29 0 chr2 5152569 5152604 -248103979 + L2 LINE L2 3216 3251 -21 755 279 101 13 chr2 5152707 5153023 -248103560 - MLT1A1 LTR MaLR -2 363 20 317 248 8 0 chr2 5153272 5153401 -248103182 + (TG)n Simple_repeat Simple_repeat 1 130 0 180 217 0 0 chr2 5153443 5153489 -248103094 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr2 5154356 5154381 -248102202 + AT_rich Low_complexity Low_complexity 1 25 0 190 360 73 40 chr2 5154425 5154575 -248102008 + MIR3 SINE MIR 22 176 -32 2729 229 30 30 chr2 5154750 5155587 -248100996 - L1MD1 LINE L1 -2 6240 5404 1187 186 11 30 chr2 5155589 5155853 -248100730 + MLT1B LTR MaLR 3 261 -129 669 108 0 10 chr2 5205855 5205957 -248050626 - AluS SINE Alu -211 101 1 531 271 65 28 chr2 5206029 5206243 -248050340 - MIR SINE MIR -1 261 40 1755 175 14 14 chr2 5206443 5206740 -248049843 - AluJb SINE Alu -15 297 1 1937 166 48 45 chr2 5208659 5209015 -248047568 + LTR18A LTR ERVL 1 357 0 2272 12 0 0 chr2 5209464 5209714 -248046869 + AluYa5 SINE Alu 62 311 0 181 125 42 28 chr2 5209962 5210034 -248046549 + (TA)n Simple_repeat Simple_repeat 2 74 0 229 165 39 10 chr2 5210078 5210181 -248046402 + (TA)n Simple_repeat Simple_repeat 2 107 0 28 0 0 0 chr2 5210256 5210284 -248046299 + AT_rich Low_complexity Low_complexity 1 28 0 253 348 121 9 chr2 5211509 5211637 -248044946 + MIR SINE MIR 13 147 -61 25 0 0 0 chr2 5211988 5212013 -248044570 + AT_rich Low_complexity Low_complexity 1 25 0 471 211 9 0 chr2 5212046 5212155 -248044428 + L1MB1 LINE L1 6050 6159 -9 3542 176 45 32 chr2 5212182 5212877 -248043706 + MER44D DNA MER2_type 2 705 0 565 263 0 0 chr2 5212894 5213046 -248043537 + L1MA10 LINE L1 6181 6332 -2 2052 137 3 10 chr2 5213224 5213523 -248043060 + AluSx SINE Alu 1 297 -15 339 25 0 0 chr2 5213565 5213605 -248042978 + (TG)n Simple_repeat Simple_repeat 2 41 0 286 341 105 44 chr2 5213939 5214588 -248041995 - L2 LINE L2 -261 3052 2362 239 318 25 117 chr2 5214614 5214853 -248041730 - MIR SINE MIR -35 227 11 1658 198 87 15 chr2 5214869 5215515 -248041068 - L1MD1 LINE L1 -303 6333 5592 2043 164 0 0 chr2 5215529 5215840 -248040743 + AluSx SINE Alu 1 311 -1 849 110 0 0 chr2 5215846 5215973 -248040610 + (GAAA)n Simple_repeat Simple_repeat 2 128 0 312 284 0 21 chr2 5215975 5216070 -248040513 - L1MD1 LINE L1 -955 5585 5493 3118 215 46 48 chr2 5216164 5217365 -248039218 - L1MD1 LINE L1 -4195 2345 1147 221 121 0 121 chr2 5217534 5217592 -248038991 + L2 LINE L2 3222 3272 0 541 204 32 51 chr2 5217649 5217806 -248038777 - MER3 DNA MER1_type 0 209 56 3338 75 23 0 chr2 5219651 5220094 -248036489 - MLT2A2 LTR ERVL 0 453 1 37 76 0 0 chr2 5220241 5220320 -248036263 + AT_rich Low_complexity Low_complexity 1 79 0 190 205 26 0 chr2 5220330 5220408 -248036175 + (TA)n Simple_repeat Simple_repeat 2 81 0 34 0 0 0 chr2 5220408 5220442 -248036141 + AT_rich Low_complexity Low_complexity 1 34 0 504 171 29 6 chr2 5220481 5220656 -248035927 + (TA)n Simple_repeat Simple_repeat 1 179 0 187 407 68 6 chr2 5221609 5221771 -248034812 - MIR SINE MIR -32 230 59 2621 198 86 34 chr2 5221935 5222372 -248034211 - L1MB3 LINE L1 -28 6155 5742 2471 68 0 7 chr2 5222372 5222681 -248033902 + AluY SINE Alu 1 307 -4 309 51 0 0 chr2 5222683 5222722 -248033861 + (TA)n Simple_repeat Simple_repeat 1 39 0 2621 198 86 34 chr2 5222722 5222982 -248033601 - L1MB3 LINE L1 -441 5742 5419 409 332 76 43 chr2 5224682 5224920 -248031663 + L2 LINE L2 2447 2675 -638 1753 154 146 16 chr2 5224920 5225296 -248031287 + MSTA LTR MaLR 2 426 -2 409 332 76 43 chr2 5225296 5225698 -248030885 + L2 LINE L2 2675 3313 0 2435 56 10 0 chr2 5226434 5226740 -248029843 - AluY SINE Alu -2 309 1 271 282 0 13 chr2 5227118 5227196 -248029387 - MLT1J2 LTR MaLR -29 421 345 247 353 12 0 chr2 5227582 5227667 -248028916 + MIR3 SINE MIR 92 177 -31 771 247 0 5 chr2 5228064 5228250 -248028333 - MER58A DNA MER1_type -37 187 3 400 82 41 52 chr2 5228395 5228492 -248028091 + CT-rich Low_complexity Low_complexity 5 100 0 998 178 12 0 chr2 5228498 5228667 -248027916 - AluSg/x SINE Alu -9 303 133 1155 176 69 4 chr2 5228667 5228912 -248027671 - L1MA8 LINE L1 -52 6239 5979 639 215 204 18 chr2 5229070 5229480 -248027103 - MLT1F1 LTR MaLR -6 561 60 1750 177 10 7 chr2 5231135 5231440 -248025143 - AluSx SINE Alu -6 306 1 1605 173 78 0 chr2 5231478 5231761 -248024822 + AluSg SINE Alu 1 305 -5 271 244 213 8 chr2 5231869 5231996 -248024587 + L2 LINE L2 3161 3313 0 305 343 70 6 chr2 5235267 5235439 -248021144 - L1MDa LINE L1 -6261 279 97 27 81 0 0 chr2 5235442 5235504 -248021079 + AT_rich Low_complexity Low_complexity 1 62 0 292 205 33 8 chr2 5235543 5235665 -248020918 + (TA)n Simple_repeat Simple_repeat 2 126 0 413 339 44 42 chr2 5235750 5236780 -248019803 - L1MEc LINE L1 -4715 1595 530 2681 117 0 3 chr2 5238200 5238576 -248018007 + THE1C LTR MaLR 1 375 0 210 237 85 0 chr2 5239768 5239827 -248016756 + L2 LINE L2 3200 3263 -50 218 256 268 18 chr2 5240158 5240326 -248016257 + MIR SINE MIR 14 223 -39 242 250 115 13 chr2 5241100 5241256 -248015327 + L1ME4a LINE L1 5791 5962 -159 28 29 0 0 chr2 5242353 5242388 -248014195 + AT_rich Low_complexity Low_complexity 1 35 0 221 331 81 47 chr2 5244830 5245002 -248011581 + MER5A DNA MER1_type 1 178 -11 310 351 48 30 chr2 5245219 5245384 -248011199 - L2 LINE L2 -385 2929 2762 24 0 0 0 chr2 5245581 5245605 -248010978 + AT_rich Low_complexity Low_complexity 1 24 0 203 325 62 100 chr2 5245616 5245776 -248010807 - MIR3 SINE MIR -14 194 41 233 268 101 67 chr2 5248108 5248317 -248008266 - L1ME LINE L1 -254 5867 5652 208 289 0 33 chr2 5248518 5248608 -248007975 + (TA)n Simple_repeat Simple_repeat 1 87 0 1177 106 29 114 chr2 5248900 5248920 -248007663 + MER30 DNA MER1_type 6 26 -204 2788 121 0 0 chr2 5248920 5249284 -248007299 + THE1B LTR MaLR 1 364 0 1177 106 29 114 chr2 5249284 5249345 -248007238 + MER30 DNA MER1_type 26 91 -139 1985 155 0 16 chr2 5249345 5249662 -248006921 + AluSx SINE Alu 1 312 0 1177 106 29 114 chr2 5249662 5249825 -248006758 + MER30 DNA MER1_type 91 230 0 605 238 119 61 chr2 5249847 5250208 -248006375 + Charlie4a DNA MER1_type 23 404 -104 369 43 0 0 chr2 5250210 5250257 -248006326 + (TG)n Simple_repeat Simple_repeat 2 48 0 327 336 57 0 chr2 5252546 5252686 -248003897 + MIR SINE MIR 50 197 -65 208 330 96 0 chr2 5252989 5253104 -248003479 + L2 LINE L2 3188 3313 0 3591 178 60 33 chr2 5253218 5253982 -248002601 - LTR1 LTR ERV1 0 785 1 1598 225 76 57 chr2 5254207 5254728 -248001855 - MLT2B3 LTR ERVL -33 506 1 331 239 0 80 chr2 5255264 5255352 -248001231 - L2 LINE L2 -9 3304 3224 29 60 0 0 chr2 5256522 5256572 -248000011 + AT_rich Low_complexity Low_complexity 1 50 0 1002 215 27 32 chr2 5257449 5257668 -247998915 - MER20 DNA MER1_type -1 218 1 261 268 98 41 chr2 5257925 5258048 -247998535 + L2 LINE L2 3137 3266 -6 184 288 89 85 chr2 5259294 5259530 -247997053 + L2 LINE L2 3077 3313 0 2091 130 0 16 chr2 5260128 5260444 -247996139 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr2 5261022 5261048 -247995535 + AT_rich Low_complexity Low_complexity 1 26 0 1187 193 121 43 chr2 5261128 5261462 -247995121 - MLT1A1 LTR MaLR -7 421 1 26 0 0 0 chr2 5261624 5261650 -247994933 + AT_rich Low_complexity Low_complexity 1 26 0 755 194 0 15 chr2 5261662 5261796 -247994787 - FLAM_C SINE Alu -7 136 5 1032 247 18 0 chr2 5262076 5262303 -247994280 - MLT1F1 LTR MaLR -7 560 330 252 212 47 35 chr2 5262423 5262508 -247994075 - MLT1F1 LTR MaLR -481 86 1 2240 91 14 0 chr2 5263142 5263438 -247993145 + AluSp SINE Alu 1 300 -13 387 298 13 33 chr2 5263573 5263724 -247992859 + GA-rich Low_complexity Low_complexity 1 148 0 23 33 0 0 chr2 5265294 5265324 -247991259 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 5265348 5265383 -247991200 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr2 5265440 5265489 -247991094 + AT_rich Low_complexity Low_complexity 1 49 0 4060 232 113 40 chr2 5265786 5267070 -247989513 + Charlie1a DNA MER1_type 19 1396 -59 263 308 88 13 chr2 5267084 5267243 -247989340 - L2 LINE L2 -2009 1305 1135 2099 119 0 44 chr2 5268136 5268456 -247988127 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 5268728 5268756 -247987827 + AT_rich Low_complexity Low_complexity 1 28 0 333 82 0 0 chr2 5269465 5269514 -247987069 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 268 42 38 chr2 5271204 5271289 -247985294 - MIR SINE MIR -68 140 53 2732 32 0 0 chr2 5271597 5271907 -247984676 - AluY SINE Alu 0 311 2 208 164 0 36 chr2 5273494 5273549 -247983034 + CT-rich Low_complexity Low_complexity 4 56 0 310 160 13 13 chr2 5273605 5273680 -247982903 + CT-rich Low_complexity Low_complexity 4 78 0 201 313 9 18 chr2 5273991 5274103 -247982480 + GA-rich Low_complexity Low_complexity 4 114 0 199 195 18 43 chr2 5274522 5274686 -247981897 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 395 348 111 14 chr2 5275239 5275518 -247981065 - L3 LINE CR1 -25 1552 1247 793 164 0 0 chr2 5275519 5275635 -247980948 + FLAM_C SINE Alu 3 118 -15 452 126 11 0 chr2 5275944 5276031 -247980552 + (CA)n Simple_repeat Simple_repeat 1 88 0 249 326 41 10 chr2 5276378 5276476 -247980107 + MIR3 SINE MIR 62 162 -46 186 43 0 0 chr2 5277595 5277618 -247978965 + (GA)n Simple_repeat Simple_repeat 2 24 0 223 225 0 56 chr2 5280086 5280157 -247976426 + (TG)n Simple_repeat Simple_repeat 2 68 0 2483 74 3 10 chr2 5280328 5280637 -247975946 + AluSp SINE Alu 1 307 -6 217 259 46 46 chr2 5281420 5281528 -247975055 + MIR SINE MIR 112 219 -43 6469 96 15 14 chr2 5283154 5284520 -247972063 + L1PA12 LINE L1 4795 6168 0 1928 149 3 3 chr2 5284933 5285228 -247971355 + AluJo SINE Alu 1 295 -17 1942 91 88 0 chr2 5285379 5285653 -247970930 + AluSp SINE Alu 2 299 -14 947 253 83 41 chr2 5285713 5286006 -247970577 - MLT1E2 LTR MaLR -87 539 225 2339 163 49 5 chr2 5286006 5286416 -247970167 + MSTA LTR MaLR 1 428 0 947 253 83 41 chr2 5286416 5286509 -247970074 - MLT1E2 LTR MaLR -401 225 137 316 270 45 27 chr2 5287123 5287234 -247969349 + HAL1b LINE L1 621 733 -615 259 231 88 27 chr2 5287854 5288001 -247968582 + L1MDa LINE L1 2468 2623 -3917 2755 23 0 0 chr2 5288263 5288573 -247968010 + AluYa5 SINE Alu 1 310 -1 415 304 53 6 chr2 5289227 5289398 -247967185 - MIR SINE MIR -72 190 12 1026 262 75 75 chr2 5289401 5290290 -247966293 + MER45C DNA AcHobo 1 943 -10 390 305 0 0 chr2 5290379 5290484 -247966099 - L3 LINE CR1 -272 1305 1201 2295 118 0 0 chr2 5290725 5291038 -247965545 + AluSq SINE Alu 1 313 0 237 278 0 0 chr2 5292813 5292903 -247963680 + (TA)n Simple_repeat Simple_repeat 1 90 0 218 402 0 0 chr2 5292988 5293080 -247963503 - MIR3 SINE MIR -16 192 101 223 346 122 19 chr2 5293893 5294049 -247962534 - MIR SINE MIR -71 191 20 261 83 0 0 chr2 5294158 5294194 -247962389 + (T)n Simple_repeat Simple_repeat 1 36 0 234 62 0 0 chr2 5294678 5294710 -247961873 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 25 75 0 0 chr2 5294889 5294942 -247961641 + AT_rich Low_complexity Low_complexity 1 53 0 506 277 63 51 chr2 5294957 5295210 -247961373 + L2 LINE L2 3056 3311 -2 267 79 0 0 chr2 5295688 5295726 -247960857 + (TG)n Simple_repeat Simple_repeat 2 39 0 824 244 60 69 chr2 5297349 5297672 -247958911 - L2 LINE L2 -359 2913 2581 317 363 65 0 chr2 5298198 5298322 -247958261 - L2 LINE L2 0 3272 3141 1471 80 99 0 chr2 5299219 5299431 -247957152 + L1PA7 LINE L1 5917 6149 -5 417 198 12 0 chr2 5300054 5300135 -247956448 - LTR16A1 LTR ERVL -2 455 374 278 311 83 0 chr2 5300320 5300500 -247956083 - LTR16A1 LTR ERVL -116 341 147 524 234 42 42 chr2 5301258 5301450 -247955133 + MLT1J1 LTR MaLR 18 209 -237 248 266 16 40 chr2 5301560 5301684 -247954899 - LTR33 LTR ERVL -2 519 399 687 320 32 41 chr2 5302159 5302500 -247954083 - L3 LINE CR1 -175 1402 1065 724 244 37 5 chr2 5302638 5302855 -247953728 - MER58A DNA MER1_type 0 224 1 411 212 18 44 chr2 5302866 5302979 -247953604 + MER5B DNA MER1_type 4 113 -65 861 234 70 8 chr2 5302982 5303089 -247953494 - L1MDa LINE L1 -6239 301 202 1699 171 23 10 chr2 5303089 5303394 -247953189 + AluJo SINE Alu 1 309 -3 861 234 70 8 chr2 5303394 5303542 -247953041 - L1MDa LINE L1 -6338 202 30 592 218 67 22 chr2 5303905 5304084 -247952499 + MER5A DNA MER1_type 3 189 0 487 301 0 28 chr2 5304136 5304279 -247952304 - MER5B DNA MER1_type -3 175 37 290 181 0 14 chr2 5304417 5304489 -247952094 + (TA)n Simple_repeat Simple_repeat 2 72 0 350 281 0 0 chr2 5304496 5304585 -247951998 - L1MC4 LINE L1 -1339 6703 6615 1791 198 147 2 chr2 5304596 5305011 -247951572 - MLT2B2 LTR ERVL -40 475 1 1298 79 0 6 chr2 5305473 5305651 -247950932 + L1PA5 LINE L1 5978 6154 0 259 329 61 13 chr2 5306111 5306342 -247950241 - HAL1 LINE L1 -2063 444 203 436 68 27 14 chr2 5306619 5306692 -247949891 + (GAAAA)n Simple_repeat Simple_repeat 2 75 0 282 73 0 0 chr2 5306918 5306959 -247949624 + (A)n Simple_repeat Simple_repeat 1 41 0 34 42 0 0 chr2 5307654 5307702 -247948881 + AT_rich Low_complexity Low_complexity 1 48 0 411 282 15 0 chr2 5308524 5308655 -247947928 + MER94 DNA DNA 1 133 -1 2072 137 5 67 chr2 5308766 5309153 -247947430 - THE1B LTR MaLR 0 364 2 409 98 49 16 chr2 5309503 5309626 -247946957 + (TA)n Simple_repeat Simple_repeat 2 128 0 657 64 70 18 chr2 5309640 5309811 -247946772 + (TA)n Simple_repeat Simple_repeat 1 180 0 2688 20 0 0 chr2 5311626 5311928 -247944655 - AluY SINE Alu -9 302 1 24 32 0 0 chr2 5313171 5313202 -247943381 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 5313729 5313752 -247942831 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 5317081 5317102 -247939481 + AT_rich Low_complexity Low_complexity 1 21 0 498 221 66 12 chr2 5317838 5318004 -247938579 + MER39 LTR ERV1 1 170 -372 453 206 39 58 chr2 5317985 5318140 -247938443 + MER39 LTR ERV1 357 508 -199 * 2411 72 0 0 chr2 5318183 5318475 -247938108 - AluY SINE Alu -19 292 1 306 194 0 97 chr2 5318504 5318597 -247937986 - AluJ/FLAM SINE Alu -217 85 2 1525 178 6 54 chr2 5318621 5318936 -247937647 - AluJo SINE Alu -12 300 1 257 397 7 14 chr2 5319446 5319592 -247936991 - L3 LINE CR1 -4 1573 1429 2242 188 60 34 chr2 5319595 5320131 -247936452 - MLT2B3 LTR ERVL -1 553 4 1779 159 48 7 chr2 5320146 5320436 -247936147 + AluJb SINE Alu 1 302 -10 5274 188 34 54 chr2 5320437 5321748 -247934835 - ERVL-B3 LTR ERVL -8 5756 4473 2288 170 5 2 chr2 5321724 5322125 -247934458 + ERVL LTR ERVL 4077 4478 -1286 * 1922 250 78 18 chr2 5322125 5322846 -247933737 - MLT-int LTR MaLR -59 1676 864 1381 190 23 50 chr2 5322851 5323193 -247933390 - MSTD LTR MaLR -63 333 1 266 342 102 16 chr2 5323220 5323407 -247933176 - L3 LINE CR1 -208 1369 1167 277 317 58 0 chr2 5324267 5324371 -247932212 + L2 LINE L2 3203 3312 -1 291 54 0 0 chr2 5324455 5324492 -247932091 + (TG)n Simple_repeat Simple_repeat 2 38 0 215 289 64 64 chr2 5326145 5326318 -247930265 - MIR SINE MIR 0 262 90 2297 98 0 10 chr2 5326344 5326651 -247929932 + AluSc SINE Alu 1 304 -5 1797 155 67 28 chr2 5327704 5328065 -247928518 + THE1C LTR MaLR 1 375 0 321 355 61 20 chr2 5328499 5328696 -247927887 + L1MC/D LINE L1 5540 5744 -2064 2642 42 0 0 chr2 5329462 5329773 -247926810 - AluY SINE Alu 0 311 1 521 184 64 0 chr2 5329779 5329888 -247926695 - MLT1A1 LTR MaLR -249 116 1 235 283 17 0 chr2 5330287 5330347 -247926236 - MIR SINE MIR -112 96 36 2496 67 0 0 chr2 5330531 5330830 -247925753 + AluY SINE Alu 1 299 -12 1831 156 54 0 chr2 5330862 5331196 -247925387 - THE1C LTR MaLR 0 375 24 2487 67 0 0 chr2 5331688 5331986 -247924597 + AluY SINE Alu 1 298 -13 2032 150 50 6 chr2 5332018 5332377 -247924206 - THE1C LTR MaLR 0 375 1 2671 38 0 6 chr2 5332667 5332980 -247923603 + AluY SINE Alu 1 311 0 394 298 88 23 chr2 5334178 5334349 -247922234 - L1ME3A LINE L1 -24 6146 5965 548 297 176 11 chr2 5334414 5334976 -247921607 - L1ME3A LINE L1 -211 5951 5297 554 272 92 87 chr2 5335186 5335277 -247921306 - L1ME3A LINE L1 -1310 4836 4747 2222 129 0 0 chr2 5335277 5335587 -247920996 - AluSg SINE Alu 0 310 1 554 272 92 87 chr2 5335587 5337649 -247918934 - L1ME3A LINE L1 -1399 4747 2674 334 223 16 8 chr2 5337665 5337786 -247918797 + CT-rich Low_complexity Low_complexity 3 124 0 494 274 72 33 chr2 5337811 5338201 -247918382 - L1ME3A LINE L1 -3528 2618 2214 348 211 0 0 chr2 5338904 5338980 -247917603 + (TA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr2 5338979 5339017 -247917566 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 1680 184 0 7 chr2 5339017 5339295 -247917288 - AluSx SINE Alu -30 282 7 28 79 0 0 chr2 5340171 5340234 -247916349 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr2 5340438 5340463 -247916120 + (TG)n Simple_repeat Simple_repeat 1 25 0 1292 180 6 0 chr2 5341858 5342129 -247914454 - MER33 DNA MER1_type -58 266 1 536 282 44 44 chr2 5342707 5342913 -247913670 + MIR SINE MIR 41 246 -16 201 94 0 0 chr2 5342920 5342952 -247913631 + (TAG)n Simple_repeat Simple_repeat 1 32 0 228 143 0 0 chr2 5343948 5343990 -247912593 + (TC)n Simple_repeat Simple_repeat 2 43 0 2429 79 0 0 chr2 5344503 5344806 -247911777 + AluY SINE Alu 1 303 -8 252 169 102 0 chr2 5344983 5345042 -247911541 + MIR SINE MIR 87 151 -111 339 311 101 29 chr2 5345748 5345986 -247910597 + MIR SINE MIR 3 257 -5 554 352 67 15 chr2 5346547 5346950 -247909633 - L2 LINE L2 -444 2870 2447 2403 82 0 13 chr2 5348345 5348660 -247907923 - AluY SINE Alu 0 311 1 261 250 24 12 chr2 5349554 5349638 -247906945 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 843 130 15 21 chr2 5350671 5351008 -247905575 + (TG)n Simple_repeat Simple_repeat 1 334 0 1463 105 0 0 chr2 5351501 5351691 -247904892 + AluSg/x SINE Alu 110 299 -13 412 181 11 53 chr2 5355122 5355216 -247901367 + MLT1J2 LTR MaLR 361 450 0 316 260 27 0 chr2 5355292 5355442 -247901141 + (TA)n Simple_repeat Simple_repeat 2 155 0 300 237 26 0 chr2 5355547 5355720 -247900863 + (TA)n Simple_repeat Simple_repeat 1 177 0 202 429 18 39 chr2 5356248 5356343 -247900240 - L2 LINE L2 -70 3202 3106 1996 195 0 11 chr2 5356343 5356712 -247899871 - MLT1A1 LTR MaLR 0 365 1 202 429 18 39 chr2 5356712 5356896 -247899687 - L2 LINE L2 -166 3106 2929 228 35 0 0 chr2 5357793 5357822 -247898761 + (CA)n Simple_repeat Simple_repeat 2 30 0 496 304 81 20 chr2 5360377 5360692 -247895891 + L1ME LINE L1 5486 5820 -301 229 283 0 0 chr2 5360889 5360942 -247895641 + (CATA)n Simple_repeat Simple_repeat 2 54 0 351 306 99 84 chr2 5361286 5361675 -247894908 + L1ME4a LINE L1 5304 5686 -435 180 77 0 0 chr2 5361675 5361701 -247894882 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1658 180 3 28 chr2 5361704 5361993 -247894590 - AluJo SINE Alu -30 282 1 351 306 99 84 chr2 5361993 5362073 -247894510 + L1ME4a LINE L1 5687 5786 -335 332 276 163 23 chr2 5362111 5362332 -247894251 - MLT1J2 LTR MaLR -3 447 196 355 220 30 30 chr2 5363625 5363725 -247892858 + L1ME4a LINE L1 5955 6054 -67 2128 107 3 3 chr2 5364073 5364362 -247892221 + AluSx SINE Alu 3 291 -21 721 216 42 6 chr2 5364390 5364557 -247892026 + MSTD LTR MaLR 223 395 -1 384 252 172 7 chr2 5365666 5365817 -247890766 + MER117 DNA MER1_type 21 196 -1 2058 137 0 19 chr2 5366057 5366371 -247890212 - AluSx SINE Alu -4 308 1 634 339 29 4 chr2 5367348 5367622 -247888961 - L2 LINE L2 -1318 1996 1716 947 176 0 13 chr2 5369893 5370052 -247886531 + FRAM SINE Alu 1 157 -9 22 80 0 0 chr2 5372293 5372343 -247884240 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 5372372 5372394 -247884189 + AT_rich Low_complexity Low_complexity 1 22 0 1088 262 28 6 chr2 5372522 5372839 -247883744 - MER33 DNA MER1_type 0 324 1 325 299 60 22 chr2 5374671 5374805 -247881778 - MIR3 SINE MIR -59 149 11 231 347 51 10 chr2 5374932 5375078 -247881505 - MER5A DNA MER1_type -5 173 24 250 258 0 16 chr2 5375765 5375827 -247880756 - MLT1L LTR MaLR -111 504 444 430 302 58 0 chr2 5375827 5375966 -247880617 + MERVL LTR ERVL 4166 4312 -1173 1384 174 16 172 chr2 5376035 5376478 -247880105 + MLT1A2 LTR MaLR 1 374 0 256 140 0 0 chr2 5376886 5376936 -247879647 + L1MC4 LINE L1 6656 6705 -1337 257 109 22 0 chr2 5376936 5376982 -247879601 + (TA)n Simple_repeat Simple_repeat 1 47 0 2108 128 3 3 chr2 5377184 5377481 -247879102 + AluSx SINE Alu 9 305 -7 292 208 20 40 chr2 5378047 5378148 -247878435 + (TATG)n Simple_repeat Simple_repeat 2 100 0 185 156 0 22 chr2 5378163 5378208 -247878375 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 71 0 0 chr2 5378379 5378407 -247878176 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 363 283 79 12 chr2 5379280 5379452 -247877131 + MIR SINE MIR 31 209 -53 185 308 66 22 chr2 5379593 5379684 -247876899 + MIR SINE MIR 70 164 -98 283 226 39 77 chr2 5380724 5380991 -247875592 + (CCCA)n Simple_repeat Simple_repeat 1 256 0 262 203 0 31 chr2 5381550 5381614 -247874969 + G-rich Low_complexity Low_complexity 4 65 0 27 0 0 0 chr2 5381704 5381731 -247874852 + AT_rich Low_complexity Low_complexity 1 27 0 683 224 12 12 chr2 5381888 5382022 -247874561 - MER5A DNA MER1_type -8 181 45 1594 222 101 9 chr2 5382022 5382450 -247874133 + MLT1C LTR MaLR 1 467 0 683 224 12 12 chr2 5382450 5382485 -247874098 - MER5A DNA MER1_type -143 46 12 1633 160 63 3 chr2 5382608 5382895 -247873688 + MER50 LTR ERV1 3 306 -428 1279 189 44 36 chr2 5382897 5383027 -247873556 + MER50 LTR ERV1 434 562 -172 2059 125 20 17 chr2 5383027 5383324 -247873259 - AluSx SINE Alu -12 300 3 1279 189 44 36 chr2 5383324 5383468 -247873115 + MER50 LTR ERV1 562 710 -24 227 287 0 69 chr2 5383881 5383968 -247872615 - MIR SINE MIR -109 99 19 2405 84 0 7 chr2 5384180 5384489 -247872094 + AluY SINE Alu 1 307 -4 219 204 20 0 chr2 5386498 5386547 -247870036 + (TA)n Simple_repeat Simple_repeat 2 51 0 309 183 54 0 chr2 5386618 5386711 -247869872 + (TA)n Simple_repeat Simple_repeat 2 99 0 197 236 36 36 chr2 5386872 5386927 -247869656 + MIR3 SINE MIR 126 180 -28 324 216 24 32 chr2 5388569 5388694 -247867889 + (TAGA)n Simple_repeat Simple_repeat 3 126 0 222 37 0 0 chr2 5389609 5389636 -247866947 + (TG)n Simple_repeat Simple_repeat 2 28 0 2439 80 3 3 chr2 5389872 5390183 -247866400 + AluY SINE Alu 1 311 0 193 215 89 51 chr2 5390290 5390369 -247866214 + MIR3 SINE MIR 106 187 -21 807 290 140 6 chr2 5390743 5391108 -247865475 + MLT1G1 LTR MaLR 86 499 -96 201 213 0 21 chr2 5391385 5391432 -247865151 + L2 LINE L2 3267 3312 -1 285 94 31 16 chr2 5392424 5392488 -247864095 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 142 239 44 chr2 5392595 5392708 -247863875 + MLT1C LTR MaLR 2 136 -331 8950 182 35 9 chr2 5392709 5394115 -247862468 + L1MA3 LINE L1 21 1390 -6246 612 0 0 0 chr2 5394115 5394183 -247862400 + (GA)n Simple_repeat Simple_repeat 2 69 0 8950 182 35 9 chr2 5394183 5395595 -247860988 + L1MA3 LINE L1 1390 6893 -743 1096 203 8 38 chr2 5395598 5395864 -247860719 - AluJo SINE Alu -23 289 32 4628 119 80 10 chr2 5395864 5396640 -247859943 + L1MA3 LINE L1 6885 7714 -10 2256 99 0 7 chr2 5396672 5396976 -247859607 + AluSg1 SINE Alu 5 306 -3 1098 238 44 24 chr2 5396992 5397332 -247859251 + MLT1C LTR MaLR 121 467 0 348 320 26 48 chr2 5397354 5397585 -247858998 + MIR SINE MIR 13 238 -24 22 56 0 0 chr2 5398597 5398633 -247857950 + AT_rich Low_complexity Low_complexity 1 36 0 208 69 0 0 chr2 5400258 5400287 -247856296 - MIR SINE MIR -66 142 114 186 133 0 0 chr2 5401375 5401405 -247855178 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 5402269 5402297 -247854286 + AT_rich Low_complexity Low_complexity 1 28 0 2106 128 6 13 chr2 5402612 5402924 -247853659 - AluSg SINE Alu 0 310 1 464 264 22 55 chr2 5403286 5403468 -247853115 + MER69A DNA AcHobo 1 176 -1 25 0 0 0 chr2 5403669 5403694 -247852889 + AT_rich Low_complexity Low_complexity 1 25 0 2178 115 0 0 chr2 5404294 5404581 -247852002 - AluSg SINE Alu -23 287 1 1049 72 0 0 chr2 5404917 5405055 -247851528 + MLT2B1 LTR ERVL 1 138 -382 965 199 0 5 chr2 5405068 5405254 -247851329 + MLT2B2 LTR ERVL 329 513 -2 250 252 244 0 chr2 5406111 5406238 -247850345 + MIR SINE MIR 99 256 -6 243 271 14 14 chr2 5406285 5406355 -247850228 - MER5A DNA MER1_type -5 184 115 226 234 0 0 chr2 5406806 5406853 -247849730 + GA-rich Low_complexity Low_complexity 3 49 0 2700 107 0 3 chr2 5407604 5407969 -247848614 + THE1B LTR MaLR 1 364 0 4033 139 26 2 chr2 5408233 5408851 -247847732 + MER41B LTR ERV1 1 633 -2 237 268 223 27 chr2 5409370 5409482 -247847101 + MER34 LTR ERV1 8 141 -401 237 220 121 44 chr2 5409470 5409561 -247847022 + MER34 LTR ERV1 76 173 -369 * 976 211 80 35 chr2 5409550 5409851 -247846732 + MER39 LTR ERV1 391 565 0 26 0 0 0 chr2 5410452 5410478 -247846105 + AT_rich Low_complexity Low_complexity 1 26 0 414 85 0 0 chr2 5411377 5411436 -247845147 + (GGA)n Simple_repeat Simple_repeat 2 60 0 223 221 48 10 chr2 5411854 5411958 -247844625 + (TA)n Simple_repeat Simple_repeat 1 108 0 28 29 0 0 chr2 5414768 5414803 -247841780 + AT_rich Low_complexity Low_complexity 1 35 0 1772 132 0 137 chr2 5414979 5415344 -247841239 + MER1B DNA MER1_type 25 339 0 260 228 55 41 chr2 5415378 5415523 -247841060 + (ATGTG)n Simple_repeat Simple_repeat 2 148 0 208 208 6 82 chr2 5415558 5415741 -247840842 + (TG)n Simple_repeat Simple_repeat 1 169 0 * 321 208 77 30 chr2 5415640 5415808 -247840775 + (TAGTG)n Simple_repeat Simple_repeat 5 180 0 307 238 71 18 chr2 5415834 5416002 -247840581 + (TAGTG)n Simple_repeat Simple_repeat 2 178 0 2314 103 3 0 chr2 5418294 5418594 -247837989 - AluSp SINE Alu -12 301 1 346 238 266 21 chr2 5418820 5418963 -247837620 - MLT1J LTR MaLR -333 178 1 4620 306 76 33 chr2 5419891 5420367 -247836216 - L2 LINE L2 -623 2691 2237 2145 106 7 0 chr2 5420367 5420649 -247835934 - AluSc SINE Alu -25 284 1 4620 306 76 33 chr2 5420649 5421606 -247834977 - L2 LINE L2 -1077 2237 1323 1427 205 13 30 chr2 5421606 5421904 -247834679 - AluJb SINE Alu -19 293 1 4620 306 76 33 chr2 5421904 5422888 -247833695 - L2 LINE L2 -1991 1323 159 2298 114 0 0 chr2 5422888 5423187 -247833396 - AluSg SINE Alu -11 299 1 4620 306 76 33 chr2 5423187 5423261 -247833322 - L2 LINE L2 -3155 159 90 33 0 0 0 chr2 5423374 5423407 -247833176 + AT_rich Low_complexity Low_complexity 1 33 0 2506 74 0 3 chr2 5423407 5423719 -247832864 - AluY SINE Alu 0 311 1 2283 124 0 3 chr2 5423985 5424299 -247832284 + AluSq SINE Alu 1 313 0 411 347 55 24 chr2 5424302 5424682 -247831901 + L1M4 LINE L1 3115 3499 -2647 520 308 242 8 chr2 5424726 5425003 -247831580 - L2 LINE L2 -561 2753 2542 2090 191 46 20 chr2 5425003 5425458 -247831125 - MLT1C LTR MaLR 0 467 1 520 308 242 8 chr2 5425458 5425700 -247830883 - L2 LINE L2 -772 2542 2112 259 381 7 0 chr2 5425996 5426135 -247830448 + L2 LINE L2 3133 3272 0 224 29 86 0 chr2 5426799 5426834 -247829749 + T-rich Low_complexity Low_complexity 4 41 0 2318 106 0 0 chr2 5427504 5427797 -247828786 + AluSx SINE Alu 5 297 -15 257 209 11 22 chr2 5427799 5427890 -247828693 + (TA)n Simple_repeat Simple_repeat 1 90 0 1992 137 0 0 chr2 5428923 5429200 -247827383 + AluSx SINE Alu 1 277 -35 220 26 26 26 chr2 5429204 5429242 -247827341 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 5431454 5431475 -247825108 + AT_rich Low_complexity Low_complexity 1 21 0 1871 152 10 3 chr2 5431475 5431764 -247824819 - AluSx SINE Alu -20 292 2 2174 108 3 13 chr2 5432231 5432538 -247824045 - AluY SINE Alu -7 304 1 591 236 99 6 chr2 5436170 5436352 -247820231 - MER3 DNA MER1_type -1 208 10 1872 137 4 0 chr2 5436643 5436913 -247819670 + AluSx SINE Alu 22 292 -20 187 313 0 0 chr2 5436947 5436995 -247819588 - L2 LINE L2 -16 3297 3250 419 228 123 49 chr2 5437016 5437178 -247819405 - MIR SINE MIR -19 243 70 1925 110 10 61 chr2 5437595 5437905 -247818678 - AluSx SINE Alu -13 299 6 278 0 0 51 chr2 5437905 5437944 -247818639 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1233 207 73 25 chr2 5437946 5438221 -247818362 - AluJb SINE Alu -24 288 1 1191 103 65 73 chr2 5438598 5438830 -247817753 + MER30 DNA MER1_type 1 230 0 2118 104 7 0 chr2 5439030 5439317 -247817266 - AluSx SINE Alu -23 289 1 181 339 28 0 chr2 5440386 5440495 -247816088 - MIR SINE MIR -56 206 95 1295 105 5 20 chr2 5440547 5440747 -247815836 + L1PA15 LINE L1 5962 6158 -7 2072 126 0 35 chr2 5441680 5441998 -247814585 - AluSx SINE Alu -5 307 1 231 315 169 23 chr2 5442002 5442351 -247814232 + L2 LINE L2 1989 2388 -926 183 42 0 0 chr2 5443145 5443169 -247813414 + (CATTC)n Simple_repeat Simple_repeat 1 24 0 250 292 14 0 chr2 5444979 5445051 -247811532 + tRNA-Ile-ATT tRNA tRNA 1 73 -4 23 0 0 0 chr2 5446208 5446231 -247810352 + AT_rich Low_complexity Low_complexity 1 23 0 203 122 24 24 chr2 5447001 5447042 -247809541 + A-rich Low_complexity Low_complexity 4 44 0 273 329 120 12 chr2 5447239 5447406 -247809177 + MIR SINE MIR 3 187 -75 784 187 45 90 chr2 5447472 5447740 -247808843 + MLT1A1 LTR MaLR 110 365 0 637 221 0 7 chr2 5447859 5447999 -247808584 + L1PB4 LINE L1 6018 6156 0 575 225 62 0 chr2 5448466 5448595 -247807988 + MLT1A2 LTR MaLR 4 140 -234 1927 155 52 22 chr2 5448595 5448957 -247807626 + THE1C LTR MaLR 1 373 -2 9346 143 24 36 chr2 5448959 5450557 -247806026 + THE1C-int LTR MaLR 3 1580 0 1649 191 55 12 chr2 5450557 5450902 -247805681 + THE1C LTR MaLR 1 360 -15 810 222 54 42 chr2 5450914 5451153 -247805430 + MLT1A2 LTR MaLR 133 374 0 189 171 0 0 chr2 5452117 5452152 -247804431 + (TA)n Simple_repeat Simple_repeat 2 36 0 225 273 23 0 chr2 5452154 5452242 -247804341 - L1MC4 LINE L1 -1339 6703 6614 232 254 0 17 chr2 5452242 5452301 -247804282 + (TATG)n Simple_repeat Simple_repeat 2 59 0 243 270 0 0 chr2 5452301 5452390 -247804193 + L1MC4 LINE L1 6614 6702 -1340 231 277 153 7 chr2 5452480 5452617 -247803966 - MER103 DNA DNA -8 158 2 306 319 111 21 chr2 5452760 5452904 -247803679 - MER5A DNA MER1_type -31 158 2 211 327 29 39 chr2 5453719 5453823 -247802760 - MIR3 SINE MIR -35 173 71 352 285 69 14 chr2 5455451 5455595 -247800988 - MER5A DNA MER1_type -11 178 27 480 152 36 27 chr2 5455732 5455844 -247800739 - L1MB4 LINE L1 -1 6179 6067 2154 104 30 0 chr2 5455896 5456194 -247800389 - AluSg1 SINE Alu -2 307 1 2411 211 20 10 chr2 5456194 5456697 -247799886 - L1MB4 LINE L1 -106 6074 5567 299 318 8 8 chr2 5457325 5457457 -247799126 + (TGG)n Simple_repeat Simple_repeat 3 134 0 263 226 78 35 chr2 5457968 5458083 -247798500 + Charlie8 DNA MER1_type 73 192 -2225 244 325 0 8 chr2 5458140 5458318 -247798265 + (CCA)n Simple_repeat Simple_repeat 1 176 0 372 315 6 22 chr2 5458399 5458580 -247798003 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 * 442 307 11 6 chr2 5458458 5458637 -247797946 + (CCA)n Simple_repeat Simple_repeat 1 180 0 268 346 13 0 chr2 5458599 5458755 -247797828 + (CACCAT)n Simple_repeat Simple_repeat 1 158 0 * 223 250 56 28 chr2 5459357 5459429 -247797154 + L2 LINE L2 3147 3220 -52 2494 59 0 0 chr2 5460344 5460647 -247795936 - AluY SINE Alu -8 303 1 211 189 0 0 chr2 5462049 5462086 -247794497 + (TG)n Simple_repeat Simple_repeat 2 38 0 2241 104 16 0 chr2 5462124 5462431 -247794152 - AluSq SINE Alu -1 312 1 2153 139 47 36 chr2 5463055 5463415 -247793168 - THE1B LTR MaLR 0 364 1 11988 106 13 8 chr2 5463415 5464987 -247791596 - THE1B-int LTR MaLR 0 1580 1 2207 126 47 49 chr2 5464987 5465352 -247791231 - THE1B LTR MaLR 0 364 1 212 253 13 0 chr2 5466962 5467037 -247789546 + (TA)n Simple_repeat Simple_repeat 1 76 0 2218 118 7 10 chr2 5467056 5467360 -247789223 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 5467611 5467633 -247788950 + AT_rich Low_complexity Low_complexity 1 22 0 403 171 19 0 chr2 5468425 5468530 -247788053 + (TG)n Simple_repeat Simple_repeat 2 108 0 218 205 53 41 chr2 5468585 5468756 -247787827 + (TG)n Simple_repeat Simple_repeat 1 173 0 289 117 33 0 chr2 5468800 5468860 -247787723 + (TG)n Simple_repeat Simple_repeat 2 63 0 309 266 182 13 chr2 5469443 5469597 -247786986 + L1ME3A LINE L1 5986 6165 -5 339 285 128 75 chr2 5469662 5469943 -247786640 + L1MB2 LINE L1 969 1264 -5585 180 341 71 0 chr2 5470667 5470752 -247785831 + L2 LINE L2 2710 2800 -514 228 214 0 0 chr2 5470766 5470822 -247785761 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1915 158 0 0 chr2 5470877 5471168 -247785415 + AluSx SINE Alu 21 311 -1 357 223 204 32 chr2 5471172 5471329 -247785254 - MIR SINE MIR -63 199 16 202 304 152 27 chr2 5471730 5471842 -247784741 + L2 LINE L2 3187 3312 -1 2143 106 3 0 chr2 5475459 5475752 -247780831 + AluY SINE Alu 2 295 -16 760 245 70 84 chr2 5476950 5477359 -247779224 + MLT1I LTR MaLR 8 450 0 1814 138 7 24 chr2 5478550 5478887 -247777696 + AluSx SINE Alu 1 332 0 384 304 57 6 chr2 5478996 5479154 -247777429 - MIR SINE MIR -73 189 24 2199 104 0 36 chr2 5479334 5479642 -247776941 - AluSg SINE Alu -13 297 1 1427 237 113 7 chr2 5479683 5480118 -247776465 - L1ME2 LINE L1 -77 6087 5607 246 239 70 0 chr2 5480415 5480486 -247776097 - L1ME2 LINE L1 -673 5491 5416 1680 243 79 58 chr2 5480565 5480822 -247775761 - L1ME2 LINE L1 -742 5442 5192 2003 111 37 17 chr2 5480822 5481120 -247775463 - AluSx SINE Alu -8 304 1 1680 243 79 58 chr2 5481120 5481944 -247774639 - L1ME2 LINE L1 -992 5192 4321 11128 226 50 14 chr2 5481944 5482466 -247774117 + L1MB2 LINE L1 2557 3059 -3814 2204 120 0 0 chr2 5482466 5482765 -247773818 + AluSq SINE Alu 1 299 -14 11128 226 50 14 chr2 5482765 5485051 -247771532 + L1MB2 LINE L1 3059 5571 -1302 195 100 0 0 chr2 5485051 5485081 -247771502 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 11128 226 50 14 chr2 5485081 5486162 -247770421 + L1MB2 LINE L1 5571 6612 -261 2536 254 80 38 chr2 5486165 5486776 -247769807 - L1ME2 LINE L1 -2413 3733 3149 181 0 33 33 chr2 5486776 5486806 -247769777 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2536 254 80 38 chr2 5486806 5487475 -247769108 - L1ME2 LINE L1 -2997 3149 2399 21 57 0 0 chr2 5487880 5487915 -247768668 + AT_rich Low_complexity Low_complexity 1 35 0 326 307 145 22 chr2 5488173 5488352 -247768231 + MIR3 SINE MIR 8 208 0 284 303 25 0 chr2 5488584 5488703 -247767880 - L1ME LINE L1 -304 5817 5696 2499 71 0 3 chr2 5489171 5489479 -247767104 + AluY SINE Alu 1 307 -4 502 275 67 42 chr2 5490020 5490260 -247766323 + MIR SINE MIR 4 249 -13 3480 187 108 28 chr2 5490837 5491962 -247764621 + L1MB7 LINE L1 4883 6103 -81 933 271 13 4 chr2 5492244 5492469 -247764114 + Charlie1 DNA MER1_type 1 227 -2534 636 234 0 0 chr2 5492463 5492604 -247763979 + Charlie1 DNA MER1_type 2620 2760 -1 * 198 300 0 71 chr2 5492827 5492897 -247763686 - L2 LINE L2 -55 3217 3153 187 372 44 22 chr2 5493108 5493245 -247763338 + L2 LINE L2 3132 3271 -1 462 153 0 90 chr2 5495913 5496024 -247760559 - MER53 DNA DNA 0 189 89 393 276 17 26 chr2 5496916 5497032 -247759551 + MIR SINE MIR 33 147 -61 21 57 0 0 chr2 5498439 5498474 -247758109 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr2 5499483 5499521 -247757062 + (CA)n Simple_repeat Simple_repeat 1 38 0 243 0 0 0 chr2 5500364 5500391 -247756192 + (TG)n Simple_repeat Simple_repeat 1 27 0 245 281 37 49 chr2 5501586 5501668 -247754915 - MLT1K LTR MaLR -356 232 152 318 296 134 23 chr2 5502438 5502610 -247753973 - MIR SINE MIR -43 219 29 247 250 94 42 chr2 5503433 5503529 -247753054 - MIR SINE MIR -114 148 48 909 286 129 11 chr2 5503578 5503949 -247752634 + LTR16C LTR ERVL 69 483 -8 255 282 13 0 chr2 5504371 5504449 -247752134 - MER116 DNA Mariner 0 80 2 386 302 41 24 chr2 5504565 5504734 -247751849 + MIR SINE MIR 76 247 -15 195 356 82 22 chr2 5505219 5505254 -247751329 + MIR SINE MIR 49 80 -182 7009 152 43 13 chr2 5505254 5505502 -247751081 - Tigger3b DNA MER2_type -1797 1231 992 2031 134 0 0 chr2 5505502 5505959 -247750624 + AluSq SINE Alu 1 457 0 7009 152 43 13 chr2 5505959 5506905 -247749678 - Tigger3b DNA MER2_type -2036 992 1 195 356 82 22 chr2 5506905 5507004 -247749579 + MIR SINE MIR 80 191 -71 285 371 68 34 chr2 5507439 5507760 -247748823 + L2 LINE L2 2311 2642 -672 417 326 27 27 chr2 5507761 5507948 -247748635 - LTR16C LTR ERVL 0 491 305 1936 189 47 14 chr2 5508187 5508547 -247748036 - MSTD LTR MaLR 0 396 25 600 128 262 28 chr2 5508897 5509038 -247747545 - MER3 DNA MER1_type -6 203 30 479 279 38 25 chr2 5509084 5509242 -247747341 + MLT1H LTR MaLR 10 169 -380 485 274 0 16 chr2 5510155 5510279 -247746304 - MSTD LTR MaLR -78 318 197 217 239 0 0 chr2 5510353 5510399 -247746184 + MIR SINE MIR 89 134 -128 308 43 0 43 chr2 5511111 5511158 -247745425 + (TAA)n Simple_repeat Simple_repeat 2 46 0 429 293 99 42 chr2 5511574 5511765 -247744818 + MIR3 SINE MIR 1 202 -6 382 281 44 0 chr2 5512161 5512296 -247744287 - MIR3 SINE MIR -1 207 67 238 279 0 47 chr2 5512729 5512815 -247743768 + GA-rich Low_complexity Low_complexity 5 86 0 2384 64 0 0 chr2 5513901 5514243 -247742340 + AluY SINE Alu 1 342 0 256 272 87 11 chr2 5514386 5514478 -247742105 + MIR SINE MIR 91 189 -73 23 0 0 0 chr2 5515587 5515610 -247740973 + AT_rich Low_complexity Low_complexity 1 23 0 371 330 44 53 chr2 5515714 5516056 -247740527 - L2 LINE L2 -801 2513 2175 1337 219 34 70 chr2 5516174 5516473 -247740110 - MLT1A2 LTR MaLR 0 374 91 2123 182 79 89 chr2 5516473 5517033 -247739550 - MLT2B3 LTR ERVL 0 554 1 1337 219 34 70 chr2 5517033 5517121 -247739462 - MLT1A2 LTR MaLR -283 91 1 1699 219 102 2 chr2 5517627 5518047 -247738536 + MLT1C LTR MaLR 1 462 -5 1553 212 0 7 chr2 5518578 5518870 -247737713 - AluJb SINE Alu -22 290 1 531 218 69 75 chr2 5519048 5519091 -247737492 - MIR SINE MIR -8 254 212 264 77 0 0 chr2 5519091 5519130 -247737453 + (CA)n Simple_repeat Simple_repeat 2 40 0 531 218 69 75 chr2 5519130 5519188 -247737395 - MIR SINE MIR -50 212 155 2849 109 3 3 chr2 5519188 5519563 -247737020 + THE1C LTR MaLR 1 375 0 531 218 69 75 chr2 5519563 5519648 -247736935 - MIR SINE MIR -107 155 68 214 319 90 54 chr2 5519707 5519873 -247736710 - L2 LINE L2 -919 2395 2224 635 318 60 22 chr2 5520100 5520937 -247735646 + L1ME3 LINE L1 5036 5932 -230 2198 213 33 27 chr2 5521337 5521374 -247735209 - MLT2B1 LTR ERVL 0 520 485 243 0 0 0 chr2 5521374 5521401 -247735182 + (TG)n Simple_repeat Simple_repeat 2 28 0 2198 213 33 27 chr2 5521401 5521880 -247734703 - MLT2B1 LTR ERVL -35 485 1 356 290 0 0 chr2 5522364 5522464 -247734119 - MER91B DNA MER1_type -40 150 51 27 0 0 0 chr2 5524380 5524407 -247732176 + AT_rich Low_complexity Low_complexity 1 27 0 761 243 0 7 chr2 5524793 5524941 -247731642 + FRAM SINE Alu 4 150 -26 2407 82 0 13 chr2 5524943 5525247 -247731336 - AluSc SINE Alu -9 300 1 39 38 0 0 chr2 5525247 5525300 -247731283 + AT_rich Low_complexity Low_complexity 1 53 0 458 277 3 2 chr2 5526711 5526834 -247729749 - MLT1E2 LTR MaLR -202 424 262 894 289 53 73 chr2 5526883 5527256 -247729327 + HAL1 LINE L1 1054 1406 -1101 2277 111 0 16 chr2 5527256 5527571 -247729012 + AluSg SINE Alu 1 310 0 894 289 53 73 chr2 5527571 5527963 -247728620 + HAL1 LINE L1 1406 1804 -703 480 151 2 8 chr2 5528790 5528878 -247727705 + L1PB1 LINE L1 5698 5782 -369 419 147 39 0 chr2 5528897 5528999 -247727584 + (TA)n Simple_repeat Simple_repeat 1 106 0 2981 65 3 13 chr2 5528999 5529371 -247727212 + L1PB1 LINE L1 5782 6149 -2 2097 116 0 3 chr2 5529745 5530063 -247726520 - AluSq SINE Alu 0 317 1 2330 70 3 7 chr2 5530321 5530620 -247725963 + AluY SINE Alu 1 298 -13 2179 128 3 0 chr2 5580744 5581048 -247675535 + AluSx SINE Alu 1 305 -7 403 349 17 6 chr2 5581190 5581362 -247675221 + L2 LINE L2 2606 2779 -535 1932 135 0 0 chr2 5581419 5581686 -247674897 - AluSx SINE Alu -45 267 1 185 349 0 12 chr2 5582757 5582840 -247673743 - MIR SINE MIR -44 218 137 287 279 146 24 chr2 5582964 5583129 -247673454 + L1ME LINE L1 5420 5604 -560 2011 133 13 3 chr2 5583641 5583942 -247672641 - AluSp SINE Alu -5 308 5 995 209 33 113 chr2 5584226 5584623 -247671960 - MLT1A1 LTR MaLR 0 365 1 220 298 0 0 chr2 5584642 5584699 -247671884 - L3 LINE CR1 -1 1576 1520 289 330 30 88 chr2 5584828 5585125 -247671458 - L2 LINE L2 0 3272 2993 401 294 44 7 chr2 5585336 5585472 -247671111 + MIR3 SINE MIR 6 146 -62 412 264 65 75 chr2 5586152 5586353 -247670230 - MIR SINE MIR -34 228 30 360 43 0 0 chr2 5586992 5587038 -247669545 + (CA)n Simple_repeat Simple_repeat 1 46 0 354 287 25 0 chr2 5587069 5587191 -247669392 + MER112 DNA MER1_type 136 260 0 260 146 39 59 chr2 5587425 5587819 -247668764 + (TA)n Simple_repeat Simple_repeat 1 386 0 440 293 67 34 chr2 5587909 5588117 -247668466 + L2 LINE L2 3099 3313 0 184 50 100 0 chr2 5589263 5589303 -247667280 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 347 226 89 24 chr2 5590025 5590193 -247666390 - Looper DNA T2_type -10 1548 1370 * 557 264 6 0 chr2 5590186 5590349 -247666234 - Looper DNA T2_type -598 960 797 521 255 50 0 chr2 5590421 5590582 -247666001 - MER3 DNA MER1_type -20 189 21 550 195 8 0 chr2 5590592 5590710 -247665873 - L1MB1 LINE L1 -340 5828 5710 1762 138 138 9 chr2 5590751 5591100 -247665483 + MSTA LTR MaLR 2 395 -33 1929 161 0 25 chr2 5591102 5591418 -247665165 - AluJo SINE Alu -4 308 1 556 143 10 0 chr2 5591435 5591533 -247665050 - L1MA9 LINE L1 -325 5987 5889 855 299 92 9 chr2 5591542 5591870 -247664713 + LTR40a LTR ERVL 164 518 -1 1499 214 70 34 chr2 5591880 5592379 -247664204 - Looper DNA T2_type -989 569 53 1031 228 14 0 chr2 5593212 5593423 -247663160 - MER58A DNA MER1_type -9 215 2 2403 201 8 10 chr2 5594638 5595161 -247661422 - L1MB7 LINE L1 0 6184 5663 266 286 162 12 chr2 5595401 5595547 -247661036 + MIR SINE MIR 12 176 -86 479 222 43 43 chr2 5596074 5596236 -247660347 - MER20 DNA MER1_type -53 166 5 1264 291 106 39 chr2 5596250 5597276 -247659307 - L1MEc LINE L1 -4342 2054 921 3680 105 2 0 chr2 5597276 5597789 -247658794 - MER75 DNA T2_type 0 514 1 1264 291 106 39 chr2 5597789 5598066 -247658517 - L1MEc LINE L1 -5475 921 664 201 337 20 31 chr2 5598121 5598219 -247658364 - MER5B DNA MER1_type -77 101 5 1906 150 7 7 chr2 5598284 5598578 -247658005 + AluSx SINE Alu 1 294 -18 226 204 0 0 chr2 5598974 5599018 -247657565 - MER58 DNA MER1_type 0 2420 2377 326 297 64 18 chr2 5599018 5599237 -247657346 - L1MEc LINE L1 -6117 279 51 2003 167 6 6 chr2 5600037 5600373 -247656210 - MER1B DNA MER1_type -1 336 1 210 327 139 0 chr2 5600428 5600529 -247656054 - L2 LINE L2 -8 3264 3150 273 282 13 0 chr2 5600952 5601030 -247655553 + L2 LINE L2 3193 3271 -1 210 71 0 0 chr2 5601667 5601695 -247654888 + (T)n Simple_repeat Simple_repeat 1 28 0 695 255 145 33 chr2 5602470 5602925 -247653658 - HAL1 LINE L1 -125 2382 1877 578 240 125 72 chr2 5602978 5603282 -247653301 - HAL1 LINE L1 -714 1793 1474 1417 241 27 22 chr2 5604491 5604860 -247651723 + MLT1A2 LTR MaLR 1 371 -3 306 381 23 11 chr2 5607060 5607236 -247649347 + MIR3 SINE MIR 12 189 -19 275 271 42 25 chr2 5608856 5608974 -247647609 + MIR SINE MIR 96 215 -47 780 243 132 70 chr2 5609881 5610268 -247646315 - MLT2D LTR ERVL -2 412 2 1630 179 0 25 chr2 5610313 5610598 -247645985 + AluJo SINE Alu 35 312 0 447 297 92 41 chr2 5611047 5611189 -247645394 - MIR SINE MIR -23 239 83 2150 160 78 10 chr2 5611189 5611589 -247644994 - MSTA LTR MaLR 0 428 2 447 297 92 41 chr2 5611589 5611641 -247644942 - MIR SINE MIR -179 83 35 285 314 121 24 chr2 5612026 5612233 -247644350 + MLT1K LTR MaLR 326 552 -36 205 148 19 19 chr2 5612771 5612825 -247643758 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 255 40 40 20 chr2 5613501 5613551 -247643032 + (TA)n Simple_repeat Simple_repeat 2 52 0 1603 160 8 8 chr2 5614347 5614610 -247641973 + AluSx SINE Alu 48 310 -2 278 93 56 37 chr2 5615197 5615305 -247641278 + (TA)n Simple_repeat Simple_repeat 2 111 0 2162 148 0 0 chr2 5615966 5616271 -247640312 - AluSx SINE Alu -7 305 1 1833 133 35 0 chr2 5616464 5616770 -247639813 - AluSx SINE Alu 0 333 19 442 320 131 10 chr2 5617547 5617944 -247638639 - L2 LINE L2 -17 3296 2852 207 369 46 31 chr2 5618189 5618319 -247638264 - L2 LINE L2 0 3272 3141 2127 185 49 21 chr2 5618589 5619017 -247637566 + MLT1C LTR MaLR 28 467 0 283 314 163 33 chr2 5620083 5620414 -247636169 - MLT1I LTR MaLR -35 374 1 2288 108 3 3 chr2 5620471 5620778 -247635805 + AluSp SINE Alu 1 307 -6 193 313 50 0 chr2 5621728 5621808 -247634775 + MIR SINE MIR 46 129 -133 370 240 164 27 chr2 5622017 5622163 -247634420 + L1MC5 LINE L1 7746 7911 -50 235 330 139 0 chr2 5622660 5622775 -247633808 - MIR3 SINE MIR -63 145 15 285 316 0 21 chr2 5623332 5623427 -247633156 + L2 LINE L2 3175 3267 -5 279 161 0 0 chr2 5623583 5623639 -247632944 + (TG)n Simple_repeat Simple_repeat 1 56 0 609 263 60 23 chr2 5623749 5623966 -247632617 + MIR SINE MIR 13 237 -25 1592 157 39 14 chr2 5624054 5624334 -247632249 - AluJb SINE Alu -25 287 1 250 311 41 8 chr2 5625725 5625847 -247630736 - L1ME4a LINE L1 -6 6115 5990 1071 93 17 29 chr2 5625914 5626086 -247630497 - L1PA13 LINE L1 -1 6162 5993 786 256 40 4 chr2 5626124 5626351 -247630232 - MIR SINE MIR -21 241 7 23 33 0 0 chr2 5626755 5626785 -247629798 + AT_rich Low_complexity Low_complexity 1 30 0 279 287 172 0 chr2 5626890 5627012 -247629571 - L1MC4 LINE L1 -375 7667 7525 251 204 37 0 chr2 5627848 5627902 -247628681 - MIR SINE MIR -192 70 15 821 173 84 35 chr2 5629849 5630075 -247626508 + L1MB7 LINE L1 5947 6183 -1 2114 119 3 22 chr2 5630214 5630533 -247626050 - AluSp SINE Alu 0 313 1 7102 53 6 11 chr2 5631571 5633001 -247623582 + L1PA7 LINE L1 4727 6151 -3 2002 208 57 5 chr2 5633014 5633456 -247623127 + MLT1C LTR MaLR 3 467 0 244 48 48 0 chr2 5634665 5634707 -247621876 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 288 53 0 0 chr2 5635058 5635096 -247621487 + (TG)n Simple_repeat Simple_repeat 2 39 0 2020 140 10 13 chr2 5637364 5637671 -247618912 - AluSx SINE Alu -6 306 1 379 259 54 22 chr2 5639834 5640019 -247616564 + LTR16B LTR ERVL 187 377 -87 201 178 0 0 chr2 5642298 5642343 -247614240 - MER5A DNA MER1_type -22 167 123 1000 36 15 15 chr2 5642626 5642763 -247613820 + (GAAA)n Simple_repeat Simple_repeat 2 138 0 2849 13 0 0 chr2 5643476 5643784 -247612799 - AluYa5 SINE Alu -3 308 1 208 199 122 5 chr2 5644245 5644313 -247612270 + MIR SINE MIR 49 123 -85 2185 289 77 36 chr2 5645846 5647049 -247609534 + L2 LINE L2 1157 2408 -906 431 324 78 15 chr2 5647507 5647967 -247608616 + L2 LINE L2 2820 3308 -5 308 342 98 5 chr2 5648958 5649142 -247607441 + MIR SINE MIR 2 202 -60 193 306 74 46 chr2 5649330 5649438 -247607145 - L2 LINE L2 0 3272 3162 191 297 63 9 chr2 5649498 5649609 -247606974 - L2 LINE L2 -211 3061 2945 1913 178 108 11 chr2 5649660 5650093 -247606490 - L1MB3 LINE L1 -1 6182 5708 472 260 0 8 chr2 5650133 5650256 -247606327 + L2 LINE L2 3187 3308 -5 228 300 42 50 chr2 5650274 5650394 -247606189 - MIR SINE MIR -73 189 71 193 330 34 0 chr2 5650501 5650589 -247605994 + MIR SINE MIR 64 154 -108 190 291 23 11 chr2 5650790 5650877 -247605706 + MIR SINE MIR 62 148 -63 4251 152 26 1 chr2 5651591 5652308 -247604275 - L1PB4 LINE L1 -8 6148 5414 426 293 112 21 chr2 5653774 5653962 -247602621 - MIR SINE MIR -30 232 28 205 250 0 0 chr2 5654069 5654113 -247602470 - L2 LINE L2 -556 2758 2715 221 186 17 68 chr2 5654795 5654854 -247601729 - L2 LINE L2 -14 3258 3203 296 286 105 9 chr2 5654972 5655077 -247601506 + MIR SINE MIR 34 148 -114 210 284 82 75 chr2 5656914 5657048 -247599535 + MIR SINE MIR 48 182 -80 555 281 44 78 chr2 5657109 5657257 -247599326 - L2 LINE L2 -4 3309 3157 2078 115 14 0 chr2 5657257 5657543 -247599040 - AluSq SINE Alu -18 295 6 555 281 44 78 chr2 5657543 5657714 -247598869 - L2 LINE L2 -156 3157 3001 327 263 182 0 chr2 5659208 5659307 -247597276 + L2 LINE L2 3142 3258 -14 21 36 0 0 chr2 5659791 5659819 -247596764 + AT_rich Low_complexity Low_complexity 1 28 0 383 293 84 22 chr2 5659914 5660075 -247596508 + MIR3 SINE MIR 20 193 -15 1741 172 10 3 chr2 5660737 5661040 -247595543 - AluJb SINE Alu -5 307 3 2751 23 3 0 chr2 5661168 5661477 -247595106 - AluYa5 SINE Alu -1 310 1 1869 233 40 12 chr2 5661974 5662477 -247594106 + MER97a DNA MER1_type? 369 885 -9 238 299 122 20 chr2 5662801 5662948 -247593635 + MIR SINE MIR 74 235 -27 269 100 20 0 chr2 5663055 5663105 -247593478 + (TC)n Simple_repeat Simple_repeat 1 51 0 211 319 0 0 chr2 5663113 5663182 -247593401 + (CATA)n Simple_repeat Simple_repeat 3 71 0 261 153 82 0 chr2 5664240 5664296 -247592287 - MLT2B3 LTR ERVL 0 554 394 209 184 0 0 chr2 5664296 5664334 -247592249 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 736 144 17 22 chr2 5664334 5664514 -247592069 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2473 153 113 17 chr2 5664550 5665021 -247591562 - MLT2B3 LTR ERVL -38 516 1 299 272 72 32 chr2 5667758 5667883 -247588700 - L2 LINE L2 -1 3271 3142 341 327 48 48 chr2 5669151 5669402 -247587181 - L3 LINE CR1 -72 1505 1255 243 313 90 8 chr2 5669837 5669971 -247586612 - MIR SINE MIR -8 254 110 638 227 39 0 chr2 5671977 5672131 -247584452 + L1MD1 LINE L1 6083 6242 0 25 0 0 0 chr2 5673228 5673253 -247583330 + AT_rich Low_complexity Low_complexity 1 25 0 218 167 24 0 chr2 5673308 5673350 -247583233 - MIR SINE MIR -112 150 108 201 238 129 20 chr2 5673554 5673655 -247582928 - MIR SINE MIR -77 131 20 304 323 21 21 chr2 5673720 5673816 -247582767 + MIR SINE MIR 21 116 -92 24 0 0 0 chr2 5674000 5674024 -247582559 + AT_rich Low_complexity Low_complexity 1 24 0 3445 158 10 22 chr2 5674049 5674216 -247582367 - L1MA5 LINE L1 0 6300 6132 949 175 0 19 chr2 5674216 5674376 -247582207 + FRAM SINE Alu 1 157 -9 3445 158 10 22 chr2 5674376 5674833 -247581750 - L1MA5 LINE L1 -168 6132 5684 2338 197 3 37 chr2 5674833 5675378 -247581205 + L1MA5 LINE L1 5159 5664 -636 606 240 67 0 chr2 5675411 5675561 -247581022 - MER5A DNA MER1_type -29 160 1 384 88 0 0 chr2 5676596 5676653 -247579930 + (CA)n Simple_repeat Simple_repeat 1 57 0 352 284 0 0 chr2 5677718 5677799 -247578784 - L2 LINE L2 0 3313 3233 264 322 96 9 chr2 5678081 5678196 -247578387 + MIR SINE MIR 20 144 -118 313 287 111 28 chr2 5678432 5678648 -247577935 - HsTC2 DNA Tc2 -1020 878 645 2373 87 7 0 chr2 5678815 5679113 -247577470 + AluSc SINE Alu 2 301 -8 21 36 0 0 chr2 5679234 5679262 -247577321 + AT_rich Low_complexity Low_complexity 1 28 0 213 235 0 29 chr2 5679849 5679917 -247576666 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 242 293 49 0 chr2 5680197 5680279 -247576304 - HsTC2 DNA Tc2 -1329 569 484 * 264 247 13 13 chr2 5680272 5680349 -247576234 - HsTC2 DNA Tc2 -1597 301 225 1976 50 138 4 chr2 5680349 5680609 -247575974 - AluY SINE Alu -6 295 1 22 0 0 0 chr2 5681505 5681527 -247575056 + AT_rich Low_complexity Low_complexity 1 22 0 5015 181 17 13 chr2 5681536 5681916 -247574667 + Tigger3b DNA MER2_type 1 378 -2650 1916 117 50 7 chr2 5681916 5682223 -247574360 - AluSx SINE Alu 0 312 1 5015 181 17 13 chr2 5682223 5682910 -247573673 + Tigger3b DNA MER2_type 378 1231 0 1770 257 82 12 chr2 5683203 5683811 -247572772 - L1MD3 LINE L1 -2 7980 7150 1576 186 133 9 chr2 5683858 5684203 -247572380 - MLT1B LTR MaLR 0 390 3 201 171 24 0 chr2 5685101 5685142 -247571441 + (TG)n Simple_repeat Simple_repeat 2 43 0 311 279 91 61 chr2 5685650 5685847 -247570736 - L2 LINE L2 -4 3309 3107 785 225 108 95 chr2 5686340 5686683 -247569900 - MLT1H LTR MaLR -5 544 148 2082 116 0 26 chr2 5686683 5686985 -247569598 + AluSc SINE Alu 1 294 -15 785 225 108 95 chr2 5686985 5687121 -247569462 - MLT1H LTR MaLR -401 148 15 552 246 75 73 chr2 5687700 5688111 -247568472 + L1MEd LINE L1 823 1234 -4885 310 333 91 29 chr2 5688124 5688367 -247568216 + L1MEd LINE L1 1233 1490 -4639 2161 144 33 33 chr2 5688508 5688870 -247567713 - THE1B LTR MaLR 0 364 3 302 293 78 42 chr2 5690313 5690480 -247566103 + MIR SINE MIR 71 243 -19 285 294 37 37 chr2 5690514 5690623 -247565960 + L3 LINE CR1 1378 1486 -91 186 313 0 0 chr2 5690626 5690674 -247565909 + L2 LINE L2 3212 3259 -13 239 203 31 16 chr2 5690986 5691050 -247565533 - Charlie8 DNA MER1_type -2221 196 132 279 323 39 47 chr2 5692032 5692159 -247564424 + MIR SINE MIR 18 143 -119 341 172 0 0 chr2 5692785 5692843 -247563740 - L1PA16 LINE L1 -200 5966 5909 22 0 0 0 chr2 5693837 5693859 -247562724 + AT_rich Low_complexity Low_complexity 1 22 0 1494 162 4 4 chr2 5693873 5694102 -247562481 - AluSx SINE Alu -31 281 53 401 279 55 64 chr2 5694467 5694686 -247561897 - L2 LINE L2 -5 3308 3092 4683 109 8 5 chr2 5694985 5695624 -247560959 - L1PA10 LINE L1 -11 6157 5517 221 408 17 11 chr2 5696086 5696265 -247560318 + MIR SINE MIR 27 206 -56 212 348 0 0 chr2 5696382 5696451 -247560132 + L2 LINE L2 3204 3272 0 949 234 161 57 chr2 5696936 5697602 -247558981 - HAL1 LINE L1 -83 2424 1690 1039 258 119 34 chr2 5697692 5697961 -247558622 - HAL1 LINE L1 -647 1860 1537 2019 129 7 13 chr2 5697961 5698320 -247558263 + AluSx SINE Alu 1 312 0 1039 258 119 34 chr2 5698320 5698496 -247558087 - HAL1 LINE L1 -970 1537 1377 660 256 76 19 chr2 5698907 5699169 -247557414 - HAL1 LINE L1 -1119 1388 1112 609 314 181 13 chr2 5699195 5699666 -247556917 - HAL1 LINE L1 -1540 967 418 1182 238 32 18 chr2 5699707 5699989 -247556594 - HAL1 LINE L1 -2208 299 14 182 322 132 40 chr2 5700157 5700331 -247556252 - MIR SINE MIR 0 262 73 291 334 62 15 chr2 5700889 5701053 -247555530 + MIR SINE MIR 5 171 -37 32 0 0 0 chr2 5701100 5701132 -247555451 + AT_rich Low_complexity Low_complexity 1 32 0 532 330 84 44 chr2 5701286 5701703 -247554880 + L2 LINE L2 2204 2644 -670 2718 116 36 3 chr2 5701703 5702066 -247554517 + THE1C LTR MaLR 1 375 0 532 330 84 44 chr2 5702066 5702126 -247554457 + L2 LINE L2 2644 2700 -614 309 297 89 0 chr2 5702487 5702588 -247553995 + L2 LINE L2 3204 3313 0 203 224 20 0 chr2 5702663 5702712 -247553871 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 198 0 0 0 chr2 5706325 5706347 -247550236 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1001 236 72 43 chr2 5707044 5707392 -247549191 - MLT1C LTR MaLR -104 363 6 2322 104 0 7 chr2 5707446 5707755 -247548828 + AluSq SINE Alu 1 307 -6 920 274 131 18 chr2 5708802 5709305 -247547278 + L1ME4a LINE L1 5557 6116 -5 1849 151 0 7 chr2 5709956 5710241 -247546342 + AluSx SINE Alu 21 303 -9 22 35 0 0 chr2 5710306 5710335 -247546248 + AT_rich Low_complexity Low_complexity 1 29 0 1544 109 60 0 chr2 5710684 5710951 -247545632 + AluSc SINE Alu 1 283 -26 305 89 0 0 chr2 5711068 5711113 -247545470 + AluSc SINE Alu 253 297 -2 2631 51 0 0 chr2 5711380 5711691 -247544892 - AluYa5 SINE Alu 0 311 1 228 347 0 21 chr2 5712703 5712798 -247543785 + MIR SINE MIR 24 116 -92 2380 85 3 0 chr2 5712881 5713188 -247543395 - AluY SINE Alu -3 308 1 2092 104 42 3 chr2 5714187 5714475 -247542108 + AluSx SINE Alu 2 300 -12 388 293 129 30 chr2 5714839 5715071 -247541512 + MLT1J2 LTR MaLR 48 302 -148 213 21 21 83 chr2 5715359 5715407 -247541176 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 446 235 18 12 chr2 5715685 5715851 -247540732 + GA-rich Low_complexity Low_complexity 1 167 0 291 343 71 7 chr2 5717051 5717191 -247539392 + MIR SINE MIR 20 168 -94 181 362 48 38 chr2 5717298 5717403 -247539180 - L2 LINE L2 -22 3250 3145 2301 52 38 17 chr2 5717610 5717900 -247538683 + AluY SINE Alu 1 296 -15 276 322 86 53 chr2 5718450 5718602 -247537981 - L2 LINE L2 -4 3268 3112 232 360 35 9 chr2 5719421 5719535 -247537048 - MIR SINE MIR -76 132 16 260 341 31 23 chr2 5721129 5721258 -247535325 - MER5B DNA MER1_type -44 134 5 2000 137 3 0 chr2 5721323 5721616 -247534967 + AluSx SINE Alu 1 294 -18 248 111 0 0 chr2 5723998 5724034 -247532549 - U2 snRNA snRNA -152 36 1 328 177 51 0 chr2 5724050 5724129 -247532454 - MIR SINE MIR -115 147 65 2289 75 0 4 chr2 5724133 5724481 -247532102 - AluY SINE Alu 0 347 1 291 54 0 0 chr2 5725255 5725292 -247531291 + (TATG)n Simple_repeat Simple_repeat 2 38 0 256 131 16 16 chr2 5725691 5725752 -247530831 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 793 337 38 27 chr2 5725765 5726335 -247530248 - L2 LINE L2 0 3313 2737 776 226 27 27 chr2 5726358 5726544 -247530039 + MLT2B1 LTR ERVL 1 186 -334 1912 197 33 3 chr2 5726719 5727085 -247529498 + MLT2B1 LTR ERVL 144 520 0 404 351 71 14 chr2 5727102 5727313 -247529270 - L2 LINE L2 -605 2709 2487 22 0 0 0 chr2 5728053 5728075 -247528508 + AT_rich Low_complexity Low_complexity 1 22 0 887 192 0 11 chr2 5728082 5728318 -247528265 - AluJb SINE Alu -17 295 1 276 30 0 0 chr2 5728336 5728369 -247528214 + (A)n Simple_repeat Simple_repeat 1 33 0 2152 297 158 22 chr2 5728708 5729900 -247526683 + L2 LINE L2 1933 3277 -36 2094 132 0 0 chr2 5730093 5730388 -247526195 - AluSx SINE Alu -17 295 1 21 57 0 0 chr2 5730491 5730526 -247526057 + AT_rich Low_complexity Low_complexity 1 35 0 22799 104 3 2 chr2 5730624 5734552 -247522031 - L1PA7 LINE L1 -4 6465 2541 1620 127 17 0 chr2 5734560 5734797 -247521786 - L1PA7 LINE L1 -6213 248 8 551 282 23 0 chr2 5735135 5735355 -247521228 - L1MEc LINE L1 -5466 930 706 467 366 51 15 chr2 5735371 5735702 -247520881 - L1MEc LINE L1 -5941 455 113 1034 204 194 142 chr2 5735710 5736490 -247520093 + MER52A LTR ERV1 667 1486 -269 433 252 16 16 chr2 5736484 5736611 -247519972 + MER52A LTR ERV1 1599 1725 -30 * 236 288 0 0 chr2 5736835 5736908 -247519675 - MER5A DNA MER1_type -113 76 4 231 351 14 0 chr2 5737733 5737807 -247518776 - L2 LINE L2 -206 3066 2992 362 343 30 18 chr2 5737821 5737987 -247518596 + MIR SINE MIR 42 209 -53 1499 227 41 78 chr2 5737999 5738484 -247518099 + MLT1C LTR MaLR 1 467 0 292 283 186 0 chr2 5739781 5739894 -247516689 - L2 LINE L2 -1 3312 3179 455 251 123 18 chr2 5740250 5740413 -247516170 + MIR SINE MIR 2 181 -81 246 358 13 20 chr2 5741130 5741281 -247515302 - MIR3 SINE MIR -4 204 55 228 304 33 22 chr2 5741913 5742005 -247514578 - MIR3 SINE MIR -3 205 113 194 294 0 0 chr2 5743253 5743304 -247513279 - MIR SINE MIR -65 143 93 195 352 62 52 chr2 5744447 5744640 -247511943 + MIR SINE MIR 20 214 -48 227 240 132 107 chr2 5744743 5744864 -247511719 + MIR SINE MIR 61 184 -78 393 239 97 13 chr2 5744901 5745056 -247511527 - MIR SINE MIR -14 248 81 1044 232 30 4 chr2 5746853 5747086 -247509497 + MLT1B LTR MaLR 152 390 0 2540 133 11 3 chr2 5747237 5747598 -247508985 - THE1B LTR MaLR 0 364 1 1254 272 32 3 chr2 5747634 5748005 -247508578 + L1ME2 LINE L1 3938 4319 -1827 888 262 40 15 chr2 5748057 5748385 -247508198 + L1ME2 LINE L1 4409 4744 -1402 1091 280 35 8 chr2 5748385 5748989 -247507594 + L1ME2 LINE L1 4996 5616 -550 1096 217 122 9 chr2 5749001 5749507 -247507076 - MLT1E1 LTR MaLR -14 640 1 1771 235 43 50 chr2 5749514 5750074 -247506509 + L1ME2 LINE L1 5617 6332 -2 223 344 86 6 chr2 5753914 5754077 -247502506 - L3 LINE CR1 -570 1007 832 313 255 0 85 chr2 5754114 5754220 -247502363 - MIR SINE MIR -7 255 159 328 292 101 17 chr2 5754617 5754795 -247501788 + MIR SINE MIR 8 200 -62 195 282 14 28 chr2 5755197 5755268 -247501315 + MIR SINE MIR 69 138 -124 6177 166 59 20 chr2 5756467 5757206 -247499377 + Tigger3b DNA MER2_type 1 805 -2223 1552 190 35 7 chr2 5757206 5757496 -247499087 + AluJb SINE Alu 1 298 -14 6177 166 59 20 chr2 5757496 5757940 -247498643 + Tigger3b DNA MER2_type 805 1230 -1 2544 38 0 0 chr2 5758333 5758623 -247497960 - AluY SINE Alu -21 290 1 323 311 0 0 chr2 5758671 5758761 -247497822 + L1MC4 LINE L1 6614 6703 -1339 237 183 50 0 chr2 5758778 5758838 -247497745 + L1MCa LINE L1 2006 2068 -4358 * 258 256 47 0 chr2 5758805 5758891 -247497692 - L1MC4 LINE L1 -1339 6703 6614 207 100 0 0 chr2 5758896 5758926 -247497657 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 174 0 0 chr2 5758931 5758977 -247497606 - LTR66 LTR ERVL -171 439 394 234 191 0 0 chr2 5758939 5758986 -247497597 + LTR66 LTR ERVL 394 440 -170 * 236 131 16 66 chr2 5759010 5759071 -247497512 - LTR66 LTR ERVL -171 439 382 3336 123 5 9 chr2 5759316 5759884 -247496699 - L1P LINE L1 -3190 2956 2391 1366 82 0 15 chr2 5761176 5761371 -247495212 - AluY SINE Alu -13 298 107 305 224 112 37 chr2 5761502 5761609 -247494974 - MLT1G1 LTR MaLR -243 352 238 2077 147 51 12 chr2 5762137 5762591 -247493992 - L1MC1 LINE L1 -54 6290 5813 1103 303 26 28 chr2 5763676 5764098 -247492485 - L2 LINE L2 0 3313 2893 1982 236 64 75 chr2 5765242 5765932 -247490651 + L1M4 LINE L1 168 849 -5693 1613 260 83 32 chr2 5765938 5766805 -247489778 + L1M4 LINE L1 917 1830 -4816 874 282 62 46 chr2 5766804 5766966 -247489617 + L1M4 LINE L1 2302 2460 -4184 * 192 40 0 0 chr2 5766966 5766991 -247489592 + (CA)n Simple_repeat Simple_repeat 2 26 0 874 282 62 46 chr2 5766991 5767541 -247489042 + L1M4 LINE L1 2460 3042 -3602 253 299 113 0 chr2 5769005 5769102 -247487481 + MIR SINE MIR 82 189 -73 386 350 30 20 chr2 5769234 5769437 -247487146 - MIR SINE MIR -34 228 24 199 328 16 0 chr2 5770761 5770825 -247485758 - MIR SINE MIR -110 152 88 185 266 129 73 chr2 5771945 5772069 -247484514 - MIR3 SINE MIR -11 197 67 566 243 10 0 chr2 5772211 5772314 -247484269 + AluJb SINE Alu 2 105 -207 22 0 0 0 chr2 5774158 5774180 -247482403 + AT_rich Low_complexity Low_complexity 1 22 0 896 197 0 7 chr2 5774187 5774422 -247482161 - AluJb SINE Alu -17 295 1 258 32 0 0 chr2 5774440 5774471 -247482112 + (A)n Simple_repeat Simple_repeat 1 31 0 1783 300 152 28 chr2 5774810 5776006 -247480577 + L2 LINE L2 1933 3277 -36 2521 181 59 33 chr2 5776318 5776453 -247480130 + Tigger3(Golem) DNA MER2_type 2434 2564 -465 1498 194 38 7 chr2 5776453 5776742 -247479841 + AluJb SINE Alu 1 298 -14 2521 181 59 33 chr2 5776742 5777186 -247479397 + Tigger3(Golem) DNA MER2_type 2564 3028 -1 2336 66 3 0 chr2 5777579 5777868 -247478715 - AluY SINE Alu -21 290 1 186 43 0 0 chr2 5777887 5777910 -247478673 + (TC)n Simple_repeat Simple_repeat 2 24 0 430 170 21 0 chr2 5777910 5778004 -247478579 + (TA)n Simple_repeat Simple_repeat 2 97 0 197 175 38 12 chr2 5778163 5778177 -247478406 + (TA)n Simple_repeat Simple_repeat 1 13 -69 1912 99 8 8 chr2 5778177 5778440 -247478143 + AluSc SINE Alu 35 297 -12 197 175 38 12 chr2 5778440 5778505 -247478078 + (TA)n Simple_repeat Simple_repeat 13 82 0 827 281 68 35 chr2 5780658 5781178 -247475405 + L1ME LINE L1 1071 1553 -4873 1148 248 73 29 chr2 5781212 5781788 -247474795 + L1ME LINE L1 5290 5889 -557 1899 201 70 27 chr2 5781788 5782232 -247474351 - MLT1C LTR MaLR 0 467 5 1148 248 73 29 chr2 5782232 5782270 -247474313 + L1ME LINE L1 5889 5924 -522 877 120 0 0 chr2 5782955 5783110 -247473473 + AluSp/q SINE Alu 168 322 0 6571 63 141 13 chr2 5783249 5784146 -247472437 - L1PA5 LINE L1 0 6154 5228 23274 54 3 0 chr2 5784249 5787177 -247469406 - L1P LINE L1 -818 5328 2391 230 175 79 48 chr2 5788402 5788465 -247468118 - MLT1G1 LTR MaLR -1 554 490 1403 72 0 15 chr2 5788471 5788666 -247467917 - AluY SINE Alu -13 298 107 338 250 126 18 chr2 5788667 5789020 -247467563 - MLT1G1 LTR MaLR -66 529 83 253 336 77 10 chr2 5789223 5789327 -247467256 - MIR3 SINE MIR -84 124 14 209 265 0 0 chr2 5789787 5789836 -247466747 - MIR SINE MIR -56 206 158 940 219 73 155 chr2 5790060 5790511 -247466072 + MLT2B1 LTR ERVL 1 414 0 23 78 0 0 chr2 5791404 5791455 -247465128 + AT_rich Low_complexity Low_complexity 1 51 0 221 322 35 26 chr2 5793094 5793209 -247463374 + MIR SINE MIR 25 140 -122 2140 139 3 16 chr2 5795370 5795693 -247460890 + L1PA10 LINE L1 5848 6166 -2 37 23 0 0 chr2 5795966 5796010 -247460573 + AT_rich Low_complexity Low_complexity 1 44 0 1785 56 0 5 chr2 5796060 5796273 -247460310 - L1PA3 LINE L1 -2 6153 5942 261 260 0 0 chr2 5796760 5796864 -247459719 + A-rich Low_complexity Low_complexity 1 104 0 332 155 0 0 chr2 5796980 5797038 -247459545 + THE1B LTR MaLR 307 364 0 2221 257 24 49 chr2 5797038 5797909 -247458674 + L1M2 LINE L1 2633 3483 -3365 1507 186 28 7 chr2 5797909 5798200 -247458383 + AluJb SINE Alu 1 297 -15 2221 257 24 49 chr2 5798200 5798299 -247458284 + L1M2 LINE L1 3483 3583 -3265 996 237 74 43 chr2 5799109 5799459 -247457124 - MLT1C LTR MaLR -104 363 3 2327 103 0 6 chr2 5799510 5799821 -247456762 + AluSq SINE Alu 1 309 -4 5287 175 20 15 chr2 5800176 5801356 -247455227 - L1PBb LINE L1 -4845 1359 172 188 375 54 36 chr2 5801648 5801760 -247454823 - MIR3 SINE MIR -87 121 8 210 118 0 0 chr2 5801949 5801983 -247454600 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 232 298 67 112 chr2 5802013 5802325 -247454258 - L2 LINE L2 -47 3225 2928 2307 97 0 0 chr2 5803780 5804069 -247452514 + AluSc SINE Alu 19 307 -2 180 0 0 0 chr2 5804085 5804105 -247452478 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 434 299 185 45 chr2 5804116 5804538 -247452045 + MLT1K LTR MaLR 75 555 -33 672 271 40 40 chr2 5805150 5805327 -247451256 + MER45A DNA AcHobo 1 177 -1 185 131 66 16 chr2 5805333 5805394 -247451189 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 681 230 8 0 chr2 5806161 5806289 -247450294 - FLAM_A SINE Alu -5 128 2 404 305 40 7 chr2 5806858 5807009 -247449574 + MIR SINE MIR 23 178 -84 1512 164 20 43 chr2 5807761 5808065 -247448518 + Tigger2 DNA MER2_type 2421 2717 -1 416 295 120 33 chr2 5809032 5809700 -247446883 + L2 LINE L2 2580 3311 -2 872 287 104 29 chr2 5810258 5810750 -247445833 - MLT1G1 LTR MaLR -17 578 1 226 285 279 17 chr2 5810755 5810934 -247445649 + L2 LINE L2 3047 3272 0 259 319 62 18 chr2 5810972 5811085 -247445498 + L2 LINE L2 3155 3272 0 852 221 33 14 chr2 5811451 5811664 -247444919 + MER20 DNA MER1_type 2 218 -1 600 220 37 17 chr2 5812218 5812393 -247444190 + LTR41 LTR ERVL 9 201 -594 879 204 40 23 chr2 5812534 5812710 -247443873 + AluJo SINE Alu 1 179 -133 1231 167 13 35 chr2 5812812 5813040 -247443543 - THE1C LTR MaLR -152 223 1 10937 105 37 4 chr2 5813040 5814568 -247442015 - THE1B-int LTR MaLR 0 1580 2 1973 115 58 60 chr2 5814569 5814934 -247441649 - THE1B LTR MaLR 0 364 1 728 206 14 0 chr2 5814934 5815075 -247441508 - L1M2 LINE L1 -4212 2637 2495 225 0 0 0 chr2 5815077 5815102 -247441481 + (TG)n Simple_repeat Simple_repeat 2 26 0 779 161 25 6 chr2 5815102 5815263 -247441320 - L1M2 LINE L1 -4676 2173 2010 203 306 122 10 chr2 5815386 5815484 -247441099 + MER5B DNA MER1_type 68 176 -2 307 330 27 9 chr2 5815503 5815615 -247440968 - MIR SINE MIR -66 142 29 415 292 23 0 chr2 5816017 5816147 -247440436 - MIR3 SINE MIR -46 162 30 276 307 98 7 chr2 5816288 5816441 -247440142 + MER5A DNA MER1_type 17 183 -6 203 194 75 86 chr2 5816544 5816637 -247439946 - L2 LINE L2 -5 3267 3176 1932 160 16 34 chr2 5816982 5817370 -247439213 + L1MC1 LINE L1 5939 6319 -14 24 32 0 0 chr2 5817401 5817432 -247439151 + AT_rich Low_complexity Low_complexity 1 31 0 1428 209 39 7 chr2 5817436 5817718 -247438865 - AluJb SINE Alu -11 291 1 278 286 118 8 chr2 5818611 5818730 -247437853 - MIR SINE MIR -6 256 125 2324 87 7 10 chr2 5818747 5819047 -247437536 + AluSq SINE Alu 1 299 -14 593 158 44 3 chr2 5819367 5819498 -247437085 - L1MA4 LINE L1 -143 6148 6015 587 214 71 0 chr2 5819499 5819639 -247436944 + L1MA4 LINE L1 6151 6300 0 185 255 163 10 chr2 5821561 5821659 -247434924 + L2 LINE L2 3138 3250 -22 4973 230 19 11 chr2 5823031 5824270 -247432313 + L1M1 LINE L1 480 2407 -5158 840 193 50 15 chr2 5825500 5825771 -247430812 + MER4B-int LTR ERV1 2259 2960 -2362 987 211 45 59 chr2 5825832 5826617 -247429966 + MER4B-int LTR ERV1 1546 2439 -4319 2592 48 3 10 chr2 5827395 5827708 -247428875 + AluY SINE Alu 1 311 0 270 278 43 81 chr2 5828348 5828465 -247428118 - LTR33 LTR ERVL -19 502 395 2330 192 108 27 chr2 5828465 5828935 -247427648 + MLT2B3 LTR ERVL 3 519 -35 477 34 0 0 chr2 5828935 5828994 -247427589 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2330 192 108 27 chr2 5828994 5829034 -247427549 + MLT2B3 LTR ERVL 519 554 0 270 278 43 81 chr2 5829034 5829125 -247427458 - LTR33 LTR ERVL -126 395 302 2774 13 7 0 chr2 5829363 5829667 -247426916 - AluYa5 SINE Alu -5 306 1 2004 146 27 0 chr2 5829879 5830180 -247426403 - AluSx SINE Alu -2 310 2 185 402 0 0 chr2 5830624 5830726 -247425857 - MIR SINE MIR -113 149 48 521 285 30 36 chr2 5830908 5831073 -247425510 - MLT1H LTR MaLR -269 280 117 4257 225 26 38 chr2 5831173 5831838 -247424745 - L1 LINE L1 -2696 4512 3841 1684 177 20 7 chr2 5831838 5832132 -247424451 - AluSx SINE Alu -14 298 1 4257 225 26 38 chr2 5832132 5833004 -247423579 - L1 LINE L1 -3367 3841 2993 882 140 61 64 chr2 5833004 5833196 -247423387 - THE1B LTR MaLR 0 364 179 3346 209 33 23 chr2 5833297 5834153 -247422430 - L1 LINE L1 -4778 2431 1568 2758 214 78 0 chr2 5834164 5834740 -247421843 - L1 LINE L1 -6405 804 184 21 82 0 0 chr2 5834744 5834793 -247421790 + AT_rich Low_complexity Low_complexity 1 49 0 1161 231 23 13 chr2 5836492 5836791 -247419792 - AluJb SINE Alu 0 302 1 315 0 0 0 chr2 5837227 5837262 -247419321 + (TG)n Simple_repeat Simple_repeat 2 36 0 2046 124 3 3 chr2 5837290 5837588 -247418995 - AluY SINE Alu -13 298 1 506 276 33 28 chr2 5837600 5837611 -247418972 - L1M3c LINE L1 -4846 1119 1110 2234 89 4 0 chr2 5837611 5837892 -247418691 - AluY SINE Alu -29 282 1 506 276 33 28 chr2 5837892 5838094 -247418489 - L1M3c LINE L1 -4855 1110 898 24 67 0 0 chr2 5838152 5838197 -247418386 + AT_rich Low_complexity Low_complexity 1 45 0 1776 165 118 48 chr2 5838337 5838379 -247418204 - MSTA LTR MaLR 0 428 390 2115 143 21 26 chr2 5838379 5838756 -247417827 + THE1C LTR MaLR 1 375 0 1776 165 118 48 chr2 5838756 5839113 -247417470 - MSTA LTR MaLR -38 390 1 2056 172 6 0 chr2 5839114 5839474 -247417109 - MSTA-int LTR MaLR -1 1650 1289 383 188 25 0 chr2 5839474 5839554 -247417029 - MSTA-int LTR MaLR -1523 128 47 182 263 152 10 chr2 5839863 5839962 -247416621 + L2 LINE L2 3138 3250 -22 509 278 76 65 chr2 5843410 5843673 -247412910 - MLT1J LTR MaLR -244 267 2 195 235 0 0 chr2 5844741 5844792 -247411791 + (TG)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr2 5844914 5844952 -247411631 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 5845888 5845912 -247410671 + AT_rich Low_complexity Low_complexity 1 24 0 186 342 103 8 chr2 5848199 5848316 -247408267 + MIR SINE MIR 122 249 -13 236 281 70 0 chr2 5848503 5848560 -247408023 + MIR SINE MIR 66 126 -82 1698 206 28 0 chr2 5852281 5852737 -247403846 - MLT2B1 LTR ERVL 0 520 1 216 297 16 0 chr2 5853904 5853968 -247402615 - MIR SINE MIR -110 152 88 318 264 29 106 chr2 5855401 5855609 -247400974 + L1MEd LINE L1 332 523 -5596 396 0 0 0 chr2 5856250 5856294 -247400289 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr2 5857133 5857162 -247399421 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2127 101 11 0 chr2 5857163 5857440 -247399143 - AluSp SINE Alu -33 280 1 322 324 72 53 chr2 5859049 5859405 -247397178 - L2 LINE L2 -27 3245 2725 261 273 70 39 chr2 5859692 5859820 -247396763 - L2 LINE L2 -935 2379 2248 679 194 7 0 chr2 5860099 5860243 -247396340 + L1MA9 LINE L1 6166 6310 -2 1762 187 13 7 chr2 5860265 5860575 -247396008 + AluJb SINE Alu 1 312 0 396 292 81 27 chr2 5861666 5861851 -247394732 - MIR SINE MIR -9 253 59 2773 16 0 10 chr2 5862111 5862424 -247394159 + AluYa5 SINE Alu 1 310 -1 1690 214 13 34 chr2 5862685 5863064 -247393519 - MLT1A2 LTR MaLR -2 372 2 611 258 171 15 chr2 5863137 5863401 -247393182 + MLT1G1 LTR MaLR 291 595 0 566 296 74 54 chr2 5864148 5864540 -247392043 + L2 LINE L2 2914 3313 0 237 132 0 0 chr2 5865291 5865329 -247391254 + (TA)n Simple_repeat Simple_repeat 1 38 0 184 293 17 0 chr2 5865805 5865863 -247390720 - MIR SINE MIR -6 256 198 1240 91 0 141 chr2 5866400 5866554 -247390029 + MER30 DNA MER1_type 5 114 -116 1654 42 0 5 chr2 5866554 5866745 -247389838 - L1PA5 LINE L1 0 6154 5965 1240 91 0 141 chr2 5866745 5866832 -247389751 + MER30 DNA MER1_type 114 212 -18 1966 140 42 0 chr2 5866962 5867270 -247389313 + THE1B LTR MaLR 39 359 -5 241 290 165 49 chr2 5868344 5868568 -247388015 - MIR SINE MIR -1 261 12 2038 171 147 5 chr2 5869147 5869556 -247387027 - MLT1C LTR MaLR 0 467 1 1529 227 32 0 chr2 5870135 5870448 -247386135 + MLT1A1 LTR MaLR 1 323 -42 1807 94 11 26 chr2 5870468 5870735 -247385848 - L1PA11 LINE L1 -21 6153 5891 183 80 0 0 chr2 5871803 5871828 -247384755 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 354 293 69 26 chr2 5872706 5872822 -247383761 - MIR SINE MIR -69 139 19 1936 62 8 4 chr2 5874771 5875012 -247381571 - L1PA6 LINE L1 0 6154 5913 1315 253 51 16 chr2 5876549 5876921 -247379662 + MLT1E3 LTR MaLR 147 531 -93 2288 211 52 42 chr2 5877016 5877652 -247378931 - L1MB7 LINE L1 -67 6353 5712 201 208 21 0 chr2 5877723 5877771 -247378812 + (TA)n Simple_repeat Simple_repeat 1 49 0 4941 246 67 19 chr2 5877771 5878411 -247378172 - L1MB7 LINE L1 -874 5508 4900 1906 126 4 11 chr2 5878411 5878702 -247377881 + AluSx SINE Alu 15 303 0 4941 246 67 19 chr2 5878702 5879702 -247376881 - L1MB7 LINE L1 -1482 4900 3789 1056 127 20 0 chr2 5879706 5879856 -247376727 + AluSg/x SINE Alu 121 273 -39 246 32 0 0 chr2 5879857 5879888 -247376695 + (TC)n Simple_repeat Simple_repeat 2 32 0 342 250 0 22 chr2 5879894 5879986 -247376597 - L1MC4 LINE L1 -1339 6703 6614 192 234 0 0 chr2 5879986 5880033 -247376550 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 308 200 31 0 chr2 5880034 5880099 -247376484 - L1MC4 LINE L1 -1339 6703 6637 464 256 241 0 chr2 5880213 5880529 -247376054 - L1MB7 LINE L1 -2875 3507 3116 550 86 32 0 chr2 5880633 5880726 -247375857 + CT-rich Low_complexity Low_complexity 1 96 0 1530 179 58 14 chr2 5880737 5881028 -247375555 - AluJo SINE Alu -8 304 1 524 218 19 58 chr2 5881035 5881241 -247375342 - L1MB7 LINE L1 -4181 2203 2006 496 349 20 49 chr2 5881419 5881778 -247374805 + L2 LINE L2 2658 3005 -308 1999 212 26 64 chr2 5881813 5882358 -247374225 + MLT2B3 LTR ERVL 1 406 -38 256 103 0 77 chr2 5882358 5882436 -247374147 + (TA)n Simple_repeat Simple_repeat 2 73 0 267 117 67 117 chr2 5882444 5882504 -247374079 + MLT2A2 LTR ERVL 399 453 0 459 287 90 27 chr2 5882514 5882737 -247373846 + L2 LINE L2 3074 3310 -3 589 286 0 19 chr2 5883714 5883875 -247372708 + MIR SINE MIR 105 262 0 286 238 157 70 chr2 5884435 5884493 -247372090 + L2 LINE L2 2573 2625 -689 2491 114 117 8 chr2 5884493 5884879 -247371704 + MSTA LTR MaLR 1 428 0 286 238 157 70 chr2 5884879 5884992 -247371591 + L2 LINE L2 2625 2759 -555 211 287 171 16 chr2 5885133 5885262 -247371321 + L2 LINE L2 2995 3143 -170 543 198 185 25 chr2 5885299 5885456 -247371127 - MER4C LTR ERV1 0 465 284 2327 91 3 78 chr2 5885504 5885890 -247370693 - MER4A LTR ERV1 -307 357 1 1903 104 20 30 chr2 5886134 5886431 -247370152 + AluSq SINE Alu 5 298 -15 613 339 39 9 chr2 5886431 5886661 -247369922 + MIR SINE MIR 22 258 -4 1845 204 45 60 chr2 5887324 5887794 -247368789 + MLT1C LTR MaLR 4 466 -1 21 0 0 0 chr2 5888304 5888325 -247368258 + AT_rich Low_complexity Low_complexity 1 21 0 695 175 104 27 chr2 5890457 5890640 -247365943 + MLT1F LTR MaLR 1 197 -370 286 229 16 0 chr2 5890669 5890791 -247365792 + CT-rich Low_complexity Low_complexity 1 124 0 702 212 275 0 chr2 5890824 5891060 -247365523 + MLT1F LTR MaLR 240 540 -2 243 236 0 42 chr2 5891852 5891924 -247364659 + MLT1F1 LTR MaLR 499 567 0 212 302 0 0 chr2 5892254 5892307 -247364276 - L2 LINE L2 -2 3270 3218 669 226 40 40 chr2 5892552 5892701 -247363882 + MER45A DNA AcHobo 2 153 -1428 1844 179 82 9 chr2 5892701 5893041 -247363542 + MLT1A1 LTR MaLR 1 365 0 669 226 40 40 chr2 5893041 5893068 -247363515 + MER45A DNA AcHobo 152 178 0 377 323 31 69 chr2 5893143 5893403 -247363180 - LTR16A1 LTR ERVL -10 447 198 2439 172 31 14 chr2 5893484 5893908 -247362675 + MSTB1 LTR MaLR 1 431 -1 223 367 0 20 chr2 5894620 5894718 -247361865 - L2 LINE L2 -56 3257 3162 196 348 63 25 chr2 5894824 5894982 -247361601 - L2 LINE L2 -472 2842 2679 182 300 43 0 chr2 5895017 5895087 -247361496 + MIR3 SINE MIR 129 201 -7 832 221 77 10 chr2 5895145 5895340 -247361243 + MER20 DNA MER1_type 12 219 0 284 279 65 58 chr2 5897277 5897431 -247359152 + MER104 DNA Tc2 25 179 -1 33 56 0 0 chr2 5897562 5897616 -247358967 + AT_rich Low_complexity Low_complexity 1 54 0 291 250 78 43 chr2 5897886 5898002 -247358581 - MIR3 SINE MIR -54 154 35 227 305 52 45 chr2 5898758 5898912 -247357671 - MIR SINE MIR -42 220 66 673 318 27 12 chr2 5899304 5899562 -247357021 + MIR SINE MIR 1 262 0 241 391 65 0 chr2 5899750 5899888 -247356695 - L2 LINE L2 -3 3269 3123 23 0 0 0 chr2 5900549 5900572 -247356011 + AT_rich Low_complexity Low_complexity 1 23 0 209 174 0 43 chr2 5900679 5900725 -247355858 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 358 336 141 0 chr2 5901650 5901799 -247354784 + MIR SINE MIR 80 249 -13 180 0 0 0 chr2 5902585 5902605 -247353978 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 267 374 32 0 chr2 5903732 5903855 -247352728 - MIR SINE MIR -77 185 59 353 206 16 0 chr2 5903922 5903985 -247352598 - L1MC4 LINE L1 -1147 6895 6832 209 308 96 48 chr2 5904461 5904565 -247352018 - MIR SINE MIR -61 147 39 2805 115 0 6 chr2 5904900 5905266 -247351317 + THE1B LTR MaLR 1 364 0 285 328 34 62 chr2 5905276 5905453 -247351130 + HAL1 LINE L1 36 207 -2300 2288 90 0 34 chr2 5905848 5906170 -247350413 + AluY SINE Alu 1 311 0 8941 237 29 37 chr2 5906617 5912182 -247344401 + L1PA13 LINE L1 10 4998 -2586 1383 206 0 0 chr2 5912172 5912454 -247344129 + L1P LINE L1 4933 5214 -932 * 9526 183 10 16 chr2 5912455 5915010 -247341573 + L1PA13 LINE L1 5016 7601 0 293 265 0 0 chr2 5915358 5915426 -247341157 - MER58 DNA MER1_type 0 2420 2353 228 389 0 0 chr2 5915418 5915531 -247341052 - MER58 DNA MER1_type -2139 281 169 * 212 75 0 50 chr2 5918297 5918337 -247338246 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 398 364 57 43 chr2 5919234 5919674 -247336909 + L3 LINE CR1 222 667 -910 3944 128 67 38 chr2 5920702 5921392 -247335191 - L1MA9 LINE L1 0 6312 5603 2232 190 21 73 chr2 5921508 5922356 -247334227 - L1MA9 LINE L1 -682 5630 4813 607 322 0 14 chr2 5922358 5922569 -247334014 + MIR SINE MIR 45 252 -10 259 274 0 0 chr2 5922657 5922719 -247333864 - MIR SINE MIR -17 245 184 241 222 19 0 chr2 5922805 5922859 -247333724 + (TTA)n Simple_repeat Simple_repeat 1 55 0 846 156 7 0 chr2 5923248 5923389 -247333194 + L1MA8 LINE L1 6145 6286 -5 266 288 196 18 chr2 5924278 5924441 -247332142 - MIR SINE MIR -66 196 5 309 285 199 8 chr2 5924445 5924601 -247331982 - MIR3 SINE MIR -16 192 2 203 269 58 0 chr2 5927215 5927267 -247329316 + MIR SINE MIR 94 148 -60 206 252 19 68 chr2 5927537 5927640 -247328943 - MIR SINE MIR -51 211 114 311 270 61 86 chr2 5930219 5930382 -247326201 + MIR SINE MIR 34 192 -70 23 0 0 0 chr2 5930451 5930474 -247326109 + AT_rich Low_complexity Low_complexity 1 23 0 757 229 24 7 chr2 5930807 5931029 -247325554 - MLT1A2 LTR MaLR -2 386 154 610 287 56 15 chr2 5931055 5931250 -247325333 - MLT1A2 LTR MaLR -171 203 1 22 0 0 0 chr2 5932017 5932039 -247324544 + AT_rich Low_complexity Low_complexity 1 22 0 240 247 0 0 chr2 5932157 5932242 -247324341 + CT-rich Low_complexity Low_complexity 2 86 0 1611 78 10 5 chr2 5932917 5933149 -247323434 + AluSg/x SINE Alu 78 310 0 249 274 108 49 chr2 5935171 5935273 -247321310 - MIR SINE MIR -75 133 26 183 248 69 79 chr2 5936528 5936629 -247319954 + L3 LINE CR1 837 936 -641 1344 226 30 39 chr2 5939448 5939873 -247316710 - L1MD3 LINE L1 0 8042 7634 2172 95 3 0 chr2 5941267 5941586 -247314997 - AluSx SINE Alu 0 320 1 385 355 48 35 chr2 5944036 5944267 -247312316 - L2 LINE L2 -188 3084 2851 219 267 33 0 chr2 5944359 5944419 -247312164 - L2 LINE L2 -22 3291 3230 705 213 37 84 chr2 5944655 5945192 -247311391 + L1MC4 LINE L1 7373 8036 -6 2010 57 0 4 chr2 5945478 5945723 -247310860 + AluY SINE Alu 1 244 -67 221 365 25 45 chr2 5947146 5947346 -247309237 + MIR SINE MIR 53 248 -14 2371 226 32 12 chr2 5948064 5948168 -247308415 - L1MA9 LINE L1 -39 6273 6173 198 71 0 0 chr2 5948168 5948196 -247308387 + (TG)n Simple_repeat Simple_repeat 1 28 0 2371 226 32 12 chr2 5948196 5948653 -247307930 - L1MA9 LINE L1 -139 6173 5701 247 284 75 0 chr2 5948840 5948907 -247307676 - L2 LINE L2 -1 3271 3200 327 189 0 14 chr2 5949386 5949460 -247307123 - L1ME2 LINE L1 -15 6149 6077 * 436 259 186 14 chr2 5949458 5949678 -247306905 - L1M4 LINE L1 -1020 5126 4869 2191 89 4 0 chr2 5950849 5951168 -247305415 - AluY SINE Alu 0 320 1 3026 135 41 2 chr2 5952141 5952609 -247303974 + LTR19A LTR ERV1 1 486 0 188 353 67 34 chr2 5953529 5953648 -247302935 + MIR3 SINE MIR 3 125 -83 1848 154 0 3 chr2 5953838 5954131 -247302452 + AluSg SINE Alu 9 300 -10 180 0 0 0 chr2 5954555 5954575 -247302008 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1764 180 49 27 chr2 5955337 5955704 -247300879 - THE1C LTR MaLR 0 375 1 2837 207 28 5 chr2 5956164 5956743 -247299840 + MER6A DNA MER2_type 1 592 -13 236 208 112 80 chr2 5956800 5956925 -247299658 - MIR SINE MIR -69 193 65 234 298 165 8 chr2 5958184 5958305 -247298278 - MLT1J2 LTR MaLR -24 426 287 10228 155 48 10 chr2 5958618 5960411 -247296172 - Tigger2 DNA MER2_type -3 2715 854 204 263 0 0 chr2 5960413 5960489 -247296094 + (TA)n Simple_repeat Simple_repeat 2 77 0 264 202 60 0 chr2 5960620 5960704 -247295879 + (TA)n Simple_repeat Simple_repeat 2 90 0 217 224 0 17 chr2 5960699 5960757 -247295826 + GA-rich Low_complexity Low_complexity 2 58 0 * 237 297 36 18 chr2 5961097 5961262 -247295321 + L1MC/D LINE L1 5292 5459 -900 21 36 0 0 chr2 5961730 5961758 -247294825 + AT_rich Low_complexity Low_complexity 1 28 0 253 262 0 0 chr2 5961858 5961919 -247294664 + GA-rich Low_complexity Low_complexity 2 62 0 581 262 16 49 chr2 5961920 5962164 -247294419 + HAL1b LINE L1 345 580 -768 21 71 0 0 chr2 5962181 5962223 -247294360 + AT_rich Low_complexity Low_complexity 1 42 0 227 283 30 10 chr2 5962284 5962383 -247294200 + HAL1b LINE L1 444 544 -804 558 284 95 46 chr2 5962404 5962731 -247293852 + HAL1b LINE L1 613 955 -393 4316 111 16 17 chr2 5962788 5963479 -247293104 - L1PB1 LINE L1 0 6151 5462 263 197 30 15 chr2 5963592 5963658 -247292925 - L1PB1 LINE L1 -804 5350 5284 11139 211 37 40 chr2 5963828 5966036 -247290547 - L1PB1 LINE L1 -215 6652 4440 2233 102 0 7 chr2 5966036 5966331 -247290252 - AluSc SINE Alu -16 293 1 11139 211 37 40 chr2 5966331 5966817 -247289766 - L1PB1 LINE L1 -2427 4440 3954 1720 77 0 14 chr2 5966817 5967037 -247289546 + AluY SINE Alu 80 296 -15 11139 211 37 40 chr2 5967037 5969093 -247287490 - L1PB1 LINE L1 -2913 3954 1932 1413 216 63 23 chr2 5969109 5969457 -247287126 - LTR10A LTR ERV1 -67 542 181 4014 123 22 14 chr2 5969590 5970749 -247285834 - L1PBa LINE L1 -4926 1937 625 1061 174 15 0 chr2 5970741 5970936 -247285647 - L1PBa LINE L1 -6663 200 3 * 933 127 8 0 chr2 5971285 5971419 -247285164 - AluSg/x SINE Alu -14 298 164 1840 135 46 0 chr2 5971603 5971913 -247284670 + AluSx SINE Alu 1 312 0 254 319 21 14 chr2 5973879 5974020 -247282563 + L1MA9 LINE L1 6133 6274 -38 189 159 0 114 chr2 5974043 5974087 -247282496 + L2 LINE L2 3223 3261 -11 468 0 0 0 chr2 5975185 5975237 -247281346 + (CA)n Simple_repeat Simple_repeat 2 53 0 367 257 62 49 chr2 5975291 5975435 -247281148 - MIR SINE MIR -56 206 61 229 235 37 26 chr2 5975534 5975674 -247280909 + L2 LINE L2 3116 3310 -3 405 281 125 66 chr2 5976395 5976804 -247279779 + MLT1H LTR MaLR 115 547 -2 226 316 22 81 chr2 5977305 5977441 -247279142 + MIR SINE MIR 19 146 -116 361 318 78 7 chr2 5979563 5979717 -247276866 + MIR SINE MIR 87 251 -11 21 71 0 0 chr2 5982808 5982850 -247273733 + AT_rich Low_complexity Low_complexity 1 42 0 1072 187 75 85 chr2 5983047 5983422 -247273161 + THE1C LTR MaLR 5 375 0 440 214 94 0 chr2 5983422 5983539 -247273044 + THE1C-int LTR MaLR 1 128 -1523 1936 150 6 0 chr2 5983539 5983853 -247272730 + THE1C-int LTR MaLR 1289 1604 -47 773 150 101 97 chr2 5983966 5984130 -247272453 + MSTA LTR MaLR 221 388 -40 2089 141 21 26 chr2 5984130 5984507 -247272076 - THE1C LTR MaLR 0 375 1 773 150 101 97 chr2 5984507 5984549 -247272034 + MSTA LTR MaLR 388 428 0 343 274 32 48 chr2 5984614 5984738 -247271845 + L1M4 LINE L1 5032 5153 -993 1563 236 48 21 chr2 5984792 5984994 -247271589 + L1M3c LINE L1 1262 1457 -5014 2459 73 3 0 chr2 5984994 5985297 -247271286 + AluY SINE Alu 1 304 -7 1563 236 48 21 chr2 5985297 5985675 -247270908 + L1M3c LINE L1 1457 1955 -4516 193 252 30 8 chr2 5985684 5985815 -247270768 + (TA)n Simple_repeat Simple_repeat 1 134 0 2960 257 65 40 chr2 5985850 5988261 -247268322 + L1M4c LINE L1 1442 3955 -2427 2367 196 41 53 chr2 5988328 5988530 -247268053 + L1MC3 LINE L1 7187 7390 -395 4913 45 0 0 chr2 5988530 5989126 -247267457 + L1PA5 LINE L1 5556 6151 -3 297 0 0 0 chr2 5989136 5989169 -247267414 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2367 196 41 53 chr2 5989169 5989561 -247267022 + L1MC3 LINE L1 7399 7785 0 520 209 8 29 chr2 5990088 5990303 -247266280 + CT-rich Low_complexity Low_complexity 1 382 -23 1117 40 34 17 chr2 5990303 5990478 -247266105 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 520 209 8 29 chr2 5990478 5990502 -247266081 + CT-rich Low_complexity Low_complexity 382 405 0 783 196 21 11 chr2 5990636 5990825 -247265758 + L1MA3 LINE L1 6114 6304 -1 183 129 0 0 chr2 5990830 5990861 -247265722 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2029 116 39 0 chr2 5991008 5991292 -247265291 + AluSq SINE Alu 1 295 -18 1748 194 39 19 chr2 5992614 5993072 -247263511 - MLT2B1 LTR ERVL -2 513 1 21 0 0 0 chr2 5993798 5993819 -247262764 + AT_rich Low_complexity Low_complexity 1 21 0 366 239 84 42 chr2 5993985 5994127 -247262456 - MLT1J2 LTR MaLR -19 431 284 457 266 24 16 chr2 5994249 5994373 -247262210 + MER94 DNA DNA 1 125 -9 317 281 45 19 chr2 5994378 5994512 -247262071 - MLT1J2 LTR MaLR -304 142 6 295 282 113 81 chr2 5994607 5994855 -247261728 - MIR SINE MIR -6 256 1 233 293 53 67 chr2 5994979 5995129 -247261454 - L2 LINE L2 -55 3258 3111 226 309 59 0 chr2 5995725 5995793 -247260790 + MIR SINE MIR 90 161 -101 274 338 120 15 chr2 5995831 5995964 -247260619 - MIR SINE MIR -67 195 49 2265 97 3 7 chr2 5996051 5996350 -247260233 + AluY SINE Alu 1 298 -13 624 191 43 0 chr2 5996522 5996637 -247259946 + FLAM_C SINE Alu 14 133 -10 1446 201 35 6 chr2 5996638 5996981 -247259602 + L1MA8 LINE L1 5938 6290 -1 390 308 84 42 chr2 5997140 5997497 -247259086 + L1ME4a LINE L1 5748 6119 -2 231 133 0 0 chr2 5998213 5998258 -247258325 + (CA)n Simple_repeat Simple_repeat 2 46 0 1663 115 70 0 chr2 5998295 5998582 -247258001 + L1MA8 LINE L1 5980 6286 -5 33 0 0 0 chr2 5999801 5999834 -247256749 + AT_rich Low_complexity Low_complexity 1 33 0 206 203 0 17 chr2 5999888 5999947 -247256636 + GA-rich Low_complexity Low_complexity 1 58 0 931 153 71 6 chr2 6000321 6000491 -247256092 + MLT1A1 LTR MaLR 185 365 0 245 269 76 50 chr2 6000574 6000693 -247255890 + MLT1K LTR MaLR 407 528 -60 5395 129 18 3 chr2 6001082 6001968 -247254615 + L1PB1 LINE L1 4898 5806 -345 261 0 0 0 chr2 6001968 6001997 -247254586 + (TA)n Simple_repeat Simple_repeat 2 30 0 5395 129 18 3 chr2 6001997 6002346 -247254237 + L1PB1 LINE L1 5806 6148 -3 350 226 0 36 chr2 6002400 6002484 -247254099 + MIR SINE MIR 182 262 0 214 300 14 14 chr2 6003049 6003119 -247253464 + CT-rich Low_complexity Low_complexity 2 71 0 2579 87 8 46 chr2 6003137 6003527 -247253056 + THE1C LTR MaLR 1 375 0 1027 307 19 5 chr2 6003741 6004112 -247252471 + L1MEc LINE L1 308 683 -5713 1567 207 79 58 chr2 6004113 6004758 -247251825 + L1M1 LINE L1 4639 5269 -930 1954 147 0 28 chr2 6004758 6005078 -247251505 + AluSx SINE Alu 1 311 -1 189 0 0 0 chr2 6005078 6005099 -247251484 + (TA)n Simple_repeat Simple_repeat 1 21 0 261 0 0 0 chr2 6005098 6005127 -247251456 + (CA)n Simple_repeat Simple_repeat 2 30 0 1567 207 79 58 chr2 6005099 6005292 -247251291 + L1M1 LINE L1 5268 5461 -738 29 0 0 0 chr2 6005386 6005415 -247251168 + AT_rich Low_complexity Low_complexity 1 29 0 1710 194 108 14 chr2 6005463 6005881 -247250702 + MSTB2 LTR MaLR 1 457 0 456 271 25 88 chr2 6006021 6006261 -247250322 - L1ME1 LINE L1 -47 6119 5895 * 934 271 41 39 chr2 6006254 6006689 -247249894 - L1ME1 LINE L1 -160 6006 5571 417 278 82 64 chr2 6006905 6007549 -247249034 - L1MEd LINE L1 -4870 1249 594 298 20 82 20 chr2 6007748 6007797 -247248786 - MLT2A1 LTR ERVL 0 444 393 * 326 58 19 19 chr2 6007783 6007835 -247248748 + MLT2A2 LTR ERVL 400 451 -2 249 650 0 13 chr2 6007864 6008021 -247248562 + (TA)n Simple_repeat Simple_repeat 1 155 0 387 54 0 18 chr2 6008021 6008077 -247248506 + MLT2A2 LTR ERVL 399 453 0 222 37 0 0 chr2 6008208 6008235 -247248348 + (TA)n Simple_repeat Simple_repeat 2 28 0 2663 87 34 8 chr2 6008235 6008615 -247247968 - MLT2A1 LTR ERVL -54 390 1 366 297 79 42 chr2 6009029 6009194 -247247389 + MIR3 SINE MIR 28 198 -10 267 263 22 0 chr2 6009818 6009891 -247246692 - MIR SINE MIR -87 121 45 823 268 166 13 chr2 6010474 6010926 -247245657 - MLT1H LTR MaLR -25 524 4 243 0 0 0 chr2 6011466 6011493 -247245090 + (T)n Simple_repeat Simple_repeat 1 27 0 724 209 91 5 chr2 6012209 6012419 -247244164 - L1MB8 LINE L1 -6 6172 5945 410 214 11 22 chr2 6013687 6013865 -247242718 + (CA)n Simple_repeat Simple_repeat 1 176 0 437 206 11 22 chr2 6013911 6014091 -247242492 + (CA)n Simple_repeat Simple_repeat 1 178 0 451 228 19 6 chr2 6014144 6014461 -247242122 + (CA)n Simple_repeat Simple_repeat 1 321 0 358 341 36 14 chr2 6014785 6015061 -247241522 + Charlie7 DNA MER1_type 1 282 -2330 1494 139 12 0 chr2 6015084 6015336 -247241247 - Tigger5 DNA MER2_type -7 2316 2062 423 312 24 5 chr2 6015419 6015624 -247240959 + Charlie7 DNA MER1_type 334 542 -2070 1246 252 72 42 chr2 6015664 6016276 -247240307 + Charlie7 DNA MER1_type 1720 2349 -263 328 227 100 0 chr2 6016542 6016652 -247239931 + MER58B DNA MER1_type 221 341 0 2201 103 3 17 chr2 6017653 6017953 -247238630 - AluSg SINE Alu -14 296 1 1635 173 0 11 chr2 6018052 6018318 -247238265 - AluJb SINE Alu -49 263 1 633 291 12 36 chr2 6019252 6019503 -247237080 - MIR SINE MIR -6 256 12 183 306 0 0 chr2 6019866 6019915 -247236668 + L2 LINE L2 3265 3313 0 237 196 0 0 chr2 6020326 6020382 -247236201 + (TG)n Simple_repeat Simple_repeat 2 57 0 200 118 29 0 chr2 6020390 6020424 -247236159 + (TATG)n Simple_repeat Simple_repeat 4 38 0 735 120 0 0 chr2 6020761 6020869 -247235714 + L1MA3 LINE L1 6196 6303 -2 22 0 0 0 chr2 6020901 6020923 -247235660 + AT_rich Low_complexity Low_complexity 1 22 0 298 244 103 0 chr2 6021246 6021324 -247235259 + L2 LINE L2 3170 3255 -17 1355 184 164 109 chr2 6022465 6023171 -247233412 + LTR1B LTR ERV1 1 745 -81 389 287 9 0 chr2 6023254 6023369 -247233214 + LTR28 LTR ERV1 905 1020 0 259 272 0 65 chr2 6023617 6023709 -247232874 + MER5A DNA MER1_type 54 139 -50 2219 129 0 3 chr2 6023714 6024023 -247232560 - AluSq SINE Alu -3 310 3 23 0 0 0 chr2 6024028 6024051 -247232532 + AT_rich Low_complexity Low_complexity 1 23 0 608 98 10 49 chr2 6024495 6024597 -247231986 + MER4A LTR ERV1 1 98 -566 1543 150 3 77 chr2 6024597 6024970 -247231613 + MER4A LTR ERV1 261 664 0 1821 122 0 0 chr2 6025377 6025615 -247230968 - AluSx SINE Alu -74 238 1 188 304 0 18 chr2 6025820 6025876 -247230707 + L2 LINE L2 3235 3289 -24 199 61 61 0 chr2 6027964 6027997 -247228586 + A-rich Low_complexity Low_complexity 3 37 0 237 222 0 0 chr2 6028310 6028373 -247228210 + L1ME4a LINE L1 5099 5161 -985 7007 45 19 0 chr2 6028386 6029841 -247226742 + L1PA6 LINE L1 4682 6154 0 297 243 21 15 chr2 6029896 6030003 -247226580 + L1ME4a LINE L1 5157 5269 -877 369 0 0 0 chr2 6030003 6030044 -247226539 + (CA)n Simple_repeat Simple_repeat 2 42 0 297 243 21 15 chr2 6030044 6030071 -247226512 + L1ME4a LINE L1 5269 5294 -852 350 277 62 112 chr2 6030391 6030748 -247225835 + L1ME4a LINE L1 5782 6120 -1 180 284 119 18 chr2 6031907 6032016 -247224567 + MIR SINE MIR 23 142 -66 182 313 45 15 chr2 6033316 6033383 -247223200 + MIR SINE MIR 105 173 -89 385 312 82 12 chr2 6033436 6033606 -247222977 - L2 LINE L2 -15 3298 3117 264 234 16 0 chr2 6033776 6033840 -247222743 + L2 LINE L2 2723 2787 -527 487 302 94 5 chr2 6034915 6035107 -247221476 + MIR SINE MIR 48 256 -6 1107 81 0 27 chr2 6035397 6035514 -247221069 + (TTTC)n Simple_repeat Simple_repeat 1 293 0 1107 81 0 27 chr2 6035514 6035699 -247220884 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 237 297 113 66 chr2 6036056 6036268 -247220315 - MIR SINE MIR -7 255 34 263 353 17 17 chr2 6036503 6036622 -247219961 + MIR SINE MIR 37 155 -107 478 308 0 0 chr2 6037245 6037365 -247219218 - HERVL LTR ERVL -1432 4222 4103 191 298 106 0 chr2 6038149 6038243 -247218340 - L3b LINE CR1 -253 1330 1227 2136 154 0 0 chr2 6038499 6038810 -247217773 + AluSx SINE Alu 1 311 -1 278 167 302 0 chr2 6089136 6089232 -247167351 - L1ME3A LINE L1 0 6170 6046 435 19 0 0 chr2 6089323 6089375 -247167208 + (TG)n Simple_repeat Simple_repeat 2 53 0 272 229 73 9 chr2 6089567 6089676 -247166907 - L1M4 LINE L1 -1932 4214 4099 3124 231 41 24 chr2 6089685 6091218 -247165365 + L1MB7 LINE L1 4623 6179 -5 408 125 42 0 chr2 6091218 6091290 -247165293 + AluS SINE Alu 1 75 -228 854 188 0 6 chr2 6092085 6092266 -247164317 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 226 259 25 chr2 6093221 6093460 -247163123 - LTR50 LTR ERVL -4 791 497 347 259 54 60 chr2 6093596 6093762 -247162821 - LTR50 LTR ERVL -615 180 16 186 315 96 55 chr2 6094090 6094236 -247162347 - L2 LINE L2 -48 3224 3073 234 81 0 0 chr2 6094318 6094355 -247162228 + (T)n Simple_repeat Simple_repeat 1 37 0 196 328 118 0 chr2 6094776 6094895 -247161688 - MIR3 SINE MIR -43 165 33 2331 103 3 0 chr2 6095517 6095829 -247160754 - AluSq SINE Alu 0 313 1 292 321 128 66 chr2 6096120 6096543 -247160040 + L2 LINE L2 2811 3259 -13 239 191 0 29 chr2 6098365 6098373 -247158210 + (TA)n Simple_repeat Simple_repeat 1 8 -58 2362 149 20 43 chr2 6098373 6098816 -247157767 - Tigger2a DNA MER2_type 0 434 2 239 191 0 29 chr2 6098816 6098862 -247157721 + (TA)n Simple_repeat Simple_repeat 8 55 -11 1690 186 54 9 chr2 6098862 6099195 -247157388 + MER7A DNA MER2_type 1 346 0 239 191 0 29 chr2 6099195 6099207 -247157376 + (TA)n Simple_repeat Simple_repeat 55 66 0 388 261 48 38 chr2 6099893 6100126 -247156457 + L1ME LINE L1 5214 5443 -727 11566 154 25 11 chr2 6100232 6102238 -247154345 + Tigger1 DNA MER2_type 1 2034 -384 337 102 0 0 chr2 6102323 6102372 -247154211 + Tigger1 DNA MER2_type 2044 2092 -326 437 78 62 0 chr2 6102373 6102437 -247154146 + Alu SINE Alu 223 290 -21 1765 178 34 0 chr2 6102439 6102765 -247153818 + Tigger1 DNA MER2_type 2080 2416 -2 974 233 57 56 chr2 6103091 6103624 -247152959 - L1PBb LINE L1 -4798 1405 781 186 382 61 23 chr2 6103866 6104128 -247152455 - L2 LINE L2 -991 2323 2052 26 0 0 0 chr2 6104700 6104726 -247151857 + AT_rich Low_complexity Low_complexity 1 26 0 800 178 71 46 chr2 6105257 6105454 -247151129 + MER58A DNA MER1_type 4 205 -19 215 273 80 87 chr2 6105928 6106078 -247150505 - MER5A DNA MER1_type -40 149 1 298 246 56 47 chr2 6108281 6108436 -247148147 + MIR SINE MIR 2 151 -57 640 222 6 35 chr2 6108944 6109137 -247147446 + L1M4 LINE L1 3590 3777 -2369 23 68 0 0 chr2 6109200 6109244 -247147339 + AT_rich Low_complexity Low_complexity 1 44 0 39 50 0 0 chr2 6109326 6109386 -247147197 + AT_rich Low_complexity Low_complexity 1 60 0 259 312 149 7 chr2 6109863 6110004 -247146579 - MER117 DNA MER1_type -35 162 2 2264 109 3 0 chr2 6110403 6110715 -247145868 + AluSp SINE Alu 1 313 0 931 270 48 42 chr2 6111306 6111788 -247144795 - HAL1 LINE L1 -121 2386 1902 418 314 63 20 chr2 6111908 6112303 -247144280 - HAL1 LINE L1 -1045 1462 1051 516 248 51 0 chr2 6112311 6112448 -247144135 - HAL1 LINE L1 -2313 194 51 631 266 77 10 chr2 6113530 6113827 -247142756 + Looper DNA T2_type 1 317 -1241 1174 164 10 0 chr2 6113849 6114057 -247142526 + MER2 DNA MER2_type 2 211 -134 3231 108 15 5 chr2 6114138 6114156 -247142427 - L1PA8A LINE L1 -389 5742 5726 297 0 0 0 chr2 6114156 6114189 -247142394 + (TG)n Simple_repeat Simple_repeat 2 34 0 3231 108 15 5 chr2 6114189 6115058 -247141525 - L1PA8A LINE L1 -405 5726 4848 2625 98 0 10 chr2 6115054 6115443 -247141140 + L1PA8A LINE L1 5719 6103 -28 * 221 30 61 0 chr2 6115449 6115482 -247141101 + A-rich Low_complexity Low_complexity 1 35 0 345 135 58 19 chr2 6115482 6115586 -247140997 + Looper DNA T2_type 1373 1480 -78 2465 55 0 13 chr2 6116070 6116382 -247140201 + AluY SINE Alu 1 308 -3 2262 117 0 3 chr2 6117347 6117656 -247138927 - AluSc SINE Alu -1 308 1 497 297 95 54 chr2 6118616 6119175 -247137408 - L2 LINE L2 -13 3300 2702 1105 107 0 47 chr2 6119184 6119353 -247137230 - AluSg SINE Alu -30 280 120 201 74 0 0 chr2 6119356 6119383 -247137200 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1033 92 0 0 chr2 6119385 6119516 -247137067 - AluSg SINE Alu -179 131 1 1181 285 203 65 chr2 6119516 6121120 -247135463 - L2 LINE L2 -599 2715 891 881 289 90 18 chr2 6122102 6122603 -247133980 + L1MCc LINE L1 861 1397 -5026 532 300 73 45 chr2 6122607 6123101 -247133482 + L1MCc LINE L1 1406 1913 -5028 231 282 35 0 chr2 6123150 6123324 -247133259 + L1MCc LINE L1 2814 2993 -4129 336 117 36 108 chr2 6123383 6123494 -247133089 - L1MA9 LINE L1 -2 6310 6208 * 871 160 46 16 chr2 6123490 6123637 -247132946 + L1MA9 LINE L1 5632 5788 -524 204 40 0 0 chr2 6123637 6123662 -247132921 + (TG)n Simple_repeat Simple_repeat 2 26 0 871 160 46 16 chr2 6123662 6123708 -247132875 + L1MA9 LINE L1 5788 5831 -481 757 152 25 7 chr2 6123710 6123873 -247132710 + L1MA9 LINE L1 5775 5946 -243 3670 197 92 42 chr2 6124002 6124277 -247132306 + L1MC3 LINE L1 6591 6851 -934 189 0 0 0 chr2 6124277 6124298 -247132285 + (CA)n Simple_repeat Simple_repeat 1 21 0 3670 197 92 42 chr2 6124298 6124319 -247132264 + L1MC3 LINE L1 6851 6869 -916 3169 148 25 17 chr2 6124319 6124841 -247131742 + MER1A DNA MER1_type 2 527 0 3670 197 92 42 chr2 6124841 6125681 -247130902 + L1MC3 LINE L1 6869 7785 0 1667 260 59 47 chr2 6125700 6126744 -247129839 + L1MCc LINE L1 3167 4223 -2718 332 319 17 9 chr2 6126956 6127072 -247129511 - MIR3 SINE MIR -18 190 74 500 160 15 15 chr2 6127166 6127297 -247129286 + CT-rich Low_complexity Low_complexity 1 131 0 2288 109 3 0 chr2 6128616 6128928 -247127655 - AluSp SINE Alu 0 313 1 342 224 14 46 chr2 6129682 6130037 -247126546 + GA-rich Low_complexity Low_complexity 1 343 0 677 186 30 9 chr2 6130054 6130392 -247126191 + GA-rich Low_complexity Low_complexity 1 345 0 21 36 0 0 chr2 6131393 6131421 -247125162 + AT_rich Low_complexity Low_complexity 1 28 0 2253 104 3 0 chr2 6131484 6131781 -247124802 + AluSx SINE Alu 1 298 -14 267 327 65 42 chr2 6131983 6132151 -247124432 - MER5A DNA MER1_type -1 188 17 329 336 50 0 chr2 6132406 6132525 -247124058 + MIR3 SINE MIR 49 173 -35 260 235 20 10 chr2 6133446 6133501 -247123082 + (TA)n Simple_repeat Simple_repeat 1 59 -40 2244 116 0 3 chr2 6133501 6133811 -247122772 - AluSg SINE Alu -1 309 1 260 235 20 10 chr2 6133811 6133853 -247122730 + (TA)n Simple_repeat Simple_repeat 59 99 0 193 200 30 140 chr2 6134046 6134146 -247122437 + L2 LINE L2 2994 3082 -190 392 335 90 75 chr2 6134319 6134775 -247121808 - L2 LINE L2 0 3313 2851 810 330 216 19 chr2 6135002 6136154 -247120429 - L2 LINE L2 -1027 2287 791 541 195 81 0 chr2 6136154 6136277 -247120306 + FLAM_A SINE Alu 1 133 0 810 330 216 19 chr2 6136277 6136572 -247120011 - L2 LINE L2 -2523 791 555 25 0 0 0 chr2 6136618 6136643 -247119940 + AT_rich Low_complexity Low_complexity 1 25 0 2488 64 0 0 chr2 6136743 6137041 -247119542 + AluY SINE Alu 1 298 -13 316 360 39 39 chr2 6137345 6137603 -247118980 - L2 LINE L2 -189 3083 2826 302 280 16 40 chr2 6139063 6139188 -247117395 - L1ME3A LINE L1 -3 6167 6046 2002 163 7 0 chr2 6139378 6139684 -247116899 - AluSx SINE Alu -4 308 1 4422 154 54 71 chr2 6140045 6141134 -247115449 + MER11C LTR ERVK 1 1071 0 1278 200 71 26 chr2 6141517 6141894 -247114689 - L1MC2 LINE L1 -2 7772 6148 1115 134 41 0 chr2 6141898 6142069 -247114514 - AluSg/x SINE Alu -1 311 134 2256 110 3 0 chr2 6142069 6142361 -247114222 - AluSp SINE Alu -15 298 6 3627 181 63 94 chr2 6142361 6143496 -247113087 - L1MC3 LINE L1 -380 7405 6306 256 325 144 8 chr2 6143796 6143931 -247112652 + MIR SINE MIR 11 159 -57 1520 178 90 26 chr2 6143946 6144289 -247112294 - MLT1A1 LTR MaLR 0 365 1 183 205 0 0 chr2 6145709 6145748 -247110835 + T-rich Low_complexity Low_complexity 1 39 0 854 190 13 0 chr2 6146193 6146351 -247110232 + FRAM SINE Alu 1 160 -6 219 241 35 58 chr2 6146506 6146593 -247109990 + MIR SINE MIR 56 140 -122 307 262 71 0 chr2 6146698 6146782 -247109801 - L1MC4 LINE L1 -1339 6703 6614 * 310 256 49 0 chr2 6146733 6146815 -247109768 + L1MC4 LINE L1 6617 6702 -1340 225 218 23 23 chr2 6146819 6146906 -247109677 - L1MC4 LINE L1 -1342 6700 6614 237 139 0 0 chr2 6146909 6146952 -247109631 + (TA)n Simple_repeat Simple_repeat 1 43 0 186 269 60 45 chr2 6147199 6147266 -247109317 + L2 LINE L2 3246 3313 0 269 186 14 0 chr2 6148030 6148100 -247108483 + (CATA)n Simple_repeat Simple_repeat 2 72 0 29 28 0 0 chr2 6148203 6148239 -247108344 + AT_rich Low_complexity Low_complexity 1 36 0 484 139 0 0 chr2 6148428 6148500 -247108083 + AluS SINE Alu 228 299 -13 199 354 101 69 chr2 6148772 6149238 -247107345 - L2 LINE L2 -2417 897 417 216 111 0 0 chr2 6149834 6149870 -247106713 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr2 6149885 6149906 -247106677 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1202 248 103 7 chr2 6150053 6150469 -247106114 + MLT1C LTR MaLR 6 461 -6 234 305 184 29 chr2 6151282 6151456 -247105127 + MIR SINE MIR 1 201 -61 735 282 53 18 chr2 6152358 6152585 -247103998 - MIR SINE MIR -13 249 15 1272 208 0 4 chr2 6153238 6153510 -247103073 - AluJb SINE Alu 0 312 42 251 270 11 45 chr2 6153868 6154046 -247102537 + (ATAAG)n Simple_repeat Simple_repeat 5 176 0 27 29 0 0 chr2 6154585 6154619 -247101964 + AT_rich Low_complexity Low_complexity 1 34 0 235 334 99 60 chr2 6154904 6155257 -247101326 + L2 LINE L2 2906 3272 0 826 263 134 26 chr2 6155764 6156114 -247100469 + MLT1B LTR MaLR 3 390 0 1406 123 53 53 chr2 6157167 6157485 -247099098 - THE1C LTR MaLR -57 318 1 28 29 0 0 chr2 6157525 6157560 -247099023 + AT_rich Low_complexity Low_complexity 1 35 0 197 139 23 0 chr2 6157560 6157603 -247098980 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 209 346 75 9 chr2 6158892 6159021 -247097562 + MIR SINE MIR 20 140 -68 208 356 67 34 chr2 6159165 6159314 -247097269 - MIR SINE MIR -95 167 14 216 280 60 40 chr2 6161062 6161162 -247095421 + MIR SINE MIR 20 121 -141 256 361 69 0 chr2 6161223 6161353 -247095230 - L2 LINE L2 0 3313 3175 238 261 0 0 chr2 6161365 6161411 -247095172 + L2 LINE L2 3209 3254 -18 227 221 174 0 chr2 6161834 6161920 -247094663 - MIR SINE MIR -71 191 91 288 324 15 7 chr2 6161971 6162107 -247094476 - LTR67 LTR ERVL -27 530 394 285 278 11 33 chr2 6163622 6163712 -247092871 + L2 LINE L2 3220 3307 -6 367 308 159 0 chr2 6164379 6164574 -247092009 - MIR SINE MIR -26 236 11 194 316 71 10 chr2 6165470 6165568 -247091015 - MIR SINE MIR -55 153 50 238 344 0 0 chr2 6165782 6165846 -247090737 + MIR SINE MIR 83 146 -62 1565 182 100 9 chr2 6165854 6166183 -247090400 - MLT1A1 LTR MaLR -6 359 1 1185 219 149 10 chr2 6166219 6166520 -247090063 - MER2 DNA MER2_type -1 343 1 21 0 0 0 chr2 6167893 6167914 -247088669 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 6167930 6168024 -247088559 + MER3 DNA MER1_type 1 96 -113 1525 246 47 30 chr2 6168030 6168497 -247088086 + L1MA9 LINE L1 5798 6272 -40 300 240 52 10 chr2 6168505 6168601 -247087982 + MER3 DNA MER1_type 99 198 -11 3624 152 0 26 chr2 6168734 6169275 -247087308 + MER1A DNA MER1_type 1 527 0 234 318 106 20 chr2 6169300 6169545 -247087038 + HAL1b LINE L1 306 571 -777 231 226 70 26 chr2 6169607 6169722 -247086861 + HAL1b LINE L1 678 797 -551 30 59 0 0 chr2 6170035 6170086 -247086497 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr2 6170093 6170130 -247086453 + AT_rich Low_complexity Low_complexity 1 37 0 1732 133 42 52 chr2 6170836 6171145 -247085438 + AluSx SINE Alu 1 306 -6 1727 199 21 57 chr2 6171207 6171400 -247085183 + MLT1A2 LTR MaLR 1 175 -199 357 43 0 0 chr2 6171400 6171447 -247085136 + (TC)n Simple_repeat Simple_repeat 2 48 0 1727 199 21 57 chr2 6171447 6171641 -247084942 + MLT1A2 LTR MaLR 175 374 0 306 362 54 0 chr2 6171658 6171807 -247084776 + L1MC4a LINE L1 4736 4892 -1254 1144 312 62 18 chr2 6172201 6172858 -247083725 + L1MC4a LINE L1 5256 5941 -1867 24 32 0 0 chr2 6173050 6173081 -247083502 + AT_rich Low_complexity Low_complexity 1 31 0 229 359 26 0 chr2 6173359 6173437 -247083146 + MIR SINE MIR 2 81 -181 389 261 7 0 chr2 6174482 6174635 -247081948 + (TG)n Simple_repeat Simple_repeat 2 155 0 1828 125 53 11 chr2 6174824 6175105 -247081478 + AluSx SINE Alu 1 293 -19 225 0 0 0 chr2 6175188 6175213 -247081370 + (TC)n Simple_repeat Simple_repeat 2 26 0 184 306 83 9 chr2 6175623 6175731 -247080852 + MIR SINE MIR 23 138 -124 397 282 75 27 chr2 6175758 6175959 -247080624 - MIR SINE MIR -27 235 25 182 239 22 0 chr2 6176133 6176179 -247080404 - L3b LINE CR1 -9 1574 1528 375 343 66 24 chr2 6176504 6176717 -247079866 - MIR SINE MIR -32 230 9 528 122 8 98 chr2 6176915 6177038 -247079545 - L1PB2 LINE L1 -4 6147 6036 296 290 90 80 chr2 6177156 6177312 -247079271 - MIR SINE MIR -2 260 100 1344 202 10 50 chr2 6177312 6177653 -247078930 + AluJb SINE Alu 1 312 0 296 290 90 80 chr2 6177653 6177696 -247078887 - MIR SINE MIR -162 100 59 3822 157 11 5 chr2 6177930 6178542 -247078041 - L1PA15 LINE L1 -2 6163 5548 28 0 0 0 chr2 6178581 6178609 -247077974 + AT_rich Low_complexity Low_complexity 1 28 0 1852 145 78 31 chr2 6179944 6180302 -247076281 + THE1C LTR MaLR 1 375 0 8726 127 115 3 chr2 6180304 6181718 -247074865 + THE1C-int LTR MaLR 3 1575 -5 1772 152 45 73 chr2 6181727 6182109 -247074474 + THE1C LTR MaLR 5 375 0 311 328 101 0 chr2 6182493 6182612 -247073971 - L2 LINE L2 -7 3306 3176 1507 189 10 34 chr2 6182650 6182946 -247073637 - AluJo SINE Alu -23 289 1 500 240 0 0 chr2 6184269 6184369 -247072214 + MER63 DNA MER1_type 27 752 -84 335 241 25 0 chr2 6184370 6184449 -247072134 + MER63 DNA MER1_type 978 1058 -2 481 270 16 0 chr2 6185051 6185177 -247071406 - L3b LINE CR1 -331 1252 1125 217 344 56 38 chr2 6185367 6185414 -247071169 - MIR3 SINE MIR -7 201 156 2504 67 0 3 chr2 6185414 6185726 -247070857 + AluY SINE Alu 1 311 0 217 344 56 38 chr2 6185726 6185838 -247070745 - MIR3 SINE MIR -52 156 39 186 280 54 21 chr2 6185964 6186057 -247070526 + L2 LINE L2 3206 3301 -12 236 62 0 0 chr2 6188565 6188597 -247067986 + HSMAR1 DNA Mariner 3 34 -1253 2294 95 0 20 chr2 6188768 6189073 -247067510 - AluSg SINE Alu -7 303 5 219 88 0 0 chr2 6190587 6190621 -247065962 + (GA)n Simple_repeat Simple_repeat 1 34 0 586 299 88 75 chr2 6190718 6191160 -247065423 + MLT1J2 LTR MaLR 1 448 -2 520 288 73 10 chr2 6191317 6191522 -247065061 - MIR SINE MIR -37 225 8 757 148 26 9 chr2 6191923 6192038 -247064545 + FLAM_C SINE Alu 12 128 -15 205 364 156 0 chr2 6192501 6192655 -247063928 - MIR SINE MIR -12 250 73 303 313 56 17 chr2 6193121 6193300 -247063283 + MIR SINE MIR 54 239 -23 33 43 0 0 chr2 6195392 6195439 -247061144 + AT_rich Low_complexity Low_complexity 1 47 0 2651 149 2 7 chr2 6196962 6197369 -247059214 + MSTA LTR MaLR 1 405 -23 1486 121 36 9 chr2 6197369 6197593 -247058990 - MER30 DNA MER1_type 0 230 1 224 227 0 0 chr2 6197624 6197668 -247058915 + (CATA)n Simple_repeat Simple_repeat 1 44 0 302 298 36 79 chr2 6198559 6198651 -247057932 - L1M4 LINE L1 -3775 2371 2277 2308 104 7 0 chr2 6198651 6198949 -247057634 - AluSp SINE Alu -13 300 1 302 298 36 79 chr2 6198949 6199108 -247057475 - L1M4 LINE L1 -3869 2277 2131 287 164 16 0 chr2 6199601 6199662 -247056921 + (TA)n Simple_repeat Simple_repeat 1 62 0 203 369 8 8 chr2 6203265 6203387 -247053196 + (TG)n Simple_repeat Simple_repeat 1 122 0 302 347 52 6 chr2 6203744 6203917 -247052666 + MIR3 SINE MIR 5 185 -23 516 186 12 0 chr2 6204906 6204992 -247051591 - FLAM_C SINE Alu -36 107 21 344 204 54 21 chr2 6205111 6205204 -247051379 - Charlie7 DNA MER1_type -2455 157 62 2204 109 6 13 chr2 6205390 6205523 -247051060 + AluSg SINE Alu 1 133 -177 2151 104 0 13 chr2 6205523 6205858 -247050725 + AluSx SINE Alu 3 312 0 2204 109 6 13 chr2 6205858 6206035 -247050548 + AluSg SINE Alu 133 309 -1 3109 123 12 6 chr2 6206156 6206637 -247049946 - L1PA13 LINE L1 -415 5746 5263 2736 125 39 2 chr2 6206637 6207033 -247049550 + L1PA13 LINE L1 5739 6160 -3 467 236 51 97 chr2 6207098 6207293 -247049290 - MIR SINE MIR -10 252 67 358 309 86 6 chr2 6207918 6208093 -247048490 + MIR SINE MIR 49 237 -25 185 163 0 82 chr2 6208483 6208532 -247048051 - L3b LINE CR1 -13 1570 1526 1718 212 57 5 chr2 6208671 6209039 -247047544 + MLT1B LTR MaLR 3 389 -1 185 323 83 53 chr2 6209596 6209729 -247046854 + MIR SINE MIR 117 253 -9 511 278 88 32 chr2 6211191 6211407 -247045176 - MIR SINE MIR -21 241 14 205 313 101 10 chr2 6211703 6211802 -247044781 + MIR SINE MIR 40 147 -115 242 379 0 0 chr2 6211947 6212042 -247044541 + MLT1G1 LTR MaLR 431 525 -70 1288 198 62 35 chr2 6212043 6212154 -247044429 + AluJo SINE Alu 4 110 -202 2261 134 19 43 chr2 6212154 6212527 -247044056 - THE1B LTR MaLR 0 364 1 1288 198 62 35 chr2 6212527 6212703 -247043880 + AluJo SINE Alu 110 299 -13 2156 117 19 3 chr2 6212983 6213308 -247043275 - Tigger3b DNA MER2_type -564 667 338 233 87 0 0 chr2 6213323 6213369 -247043214 - LTR66 LTR ERVL -171 439 394 239 211 9 28 chr2 6213377 6213486 -247043097 + (TA)n Simple_repeat Simple_repeat 2 108 0 565 158 0 10 chr2 6213486 6213587 -247042996 - Tigger3b DNA MER2_type -902 329 230 3069 196 59 6 chr2 6214487 6215150 -247041433 - L1MC2 LINE L1 0 6344 5647 21 0 0 0 chr2 6215248 6215269 -247041314 + AT_rich Low_complexity Low_complexity 1 21 0 710 191 111 5 chr2 6215800 6215989 -247040594 + L1MD3 LINE L1 6906 7114 -881 607 235 96 24 chr2 6215994 6216160 -247040423 + MER45A DNA AcHobo 1 178 0 376 323 16 8 chr2 6216172 6216299 -247040284 - MER5A DNA MER1_type -51 138 11 413 309 74 67 chr2 6216649 6217070 -247039513 + L1MEc LINE L1 2099 2500 -3715 1769 181 0 0 chr2 6217070 6217376 -247039207 + AluSx SINE Alu 1 306 0 413 309 74 67 chr2 6217376 6217545 -247039038 + L1MEc LINE L1 2500 2666 -3549 2442 125 43 14 chr2 6218818 6219170 -247037413 - THE1B LTR MaLR 0 364 3 12286 100 11 0 chr2 6219172 6220734 -247035849 - THE1B-int LTR MaLR 0 1580 2 2481 137 31 14 chr2 6220735 6221093 -247035490 - THE1B LTR MaLR 0 364 1 22 56 0 0 chr2 6221099 6221135 -247035448 + AT_rich Low_complexity Low_complexity 1 36 0 1897 146 13 23 chr2 6223098 6223400 -247033183 - AluJo SINE Alu -13 299 1 1981 139 4 0 chr2 6223446 6223766 -247032817 + AluSx SINE Alu 1 321 0 234 116 0 0 chr2 6226099 6226142 -247030441 + (T)n Simple_repeat Simple_repeat 1 43 0 323 275 44 0 chr2 6226441 6226532 -247030051 - MIR SINE MIR -62 146 52 317 301 82 35 chr2 6226759 6227075 -247029508 + L1ME LINE L1 5352 5682 -439 467 295 45 54 chr2 6227189 6227413 -247029170 + MIR SINE MIR 14 235 -27 235 188 104 0 chr2 6227846 6227894 -247028689 + L2 LINE L2 3256 3308 -5 1754 182 3 0 chr2 6227916 6228207 -247028376 + AluJb SINE Alu 12 303 -9 5029 68 0 0 chr2 6228333 6228923 -247027660 + LTR10C LTR ERV1 1 590 -1 1767 132 81 45 chr2 6229137 6229494 -247027089 - THE1C LTR MaLR 0 375 6 2080 120 3 30 chr2 6230023 6230322 -247026261 + AluSx SINE Alu 1 291 -21 10114 245 26 29 chr2 6231375 6231556 -247025027 + L1PA16 LINE L1 1983 2163 -4686 2037 151 3 0 chr2 6231556 6231868 -247024715 + AluSp SINE Alu 1 313 0 10114 245 26 29 chr2 6231868 6233322 -247023261 + L1PA16 LINE L1 2163 3620 -3229 2146 100 10 32 chr2 6233322 6233632 -247022951 + AluSq SINE Alu 1 303 -10 10114 245 26 29 chr2 6233632 6234348 -247022235 + L1PA16 LINE L1 3620 4337 -2512 261 0 0 0 chr2 6234348 6234377 -247022206 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10114 245 26 29 chr2 6234377 6236188 -247020395 + L1PA16 LINE L1 4337 6033 -816 404 167 14 14 chr2 6236188 6236260 -247020323 + AluJ/FRAM SINE Alu 217 288 -24 23 0 0 0 chr2 6236260 6236283 -247020300 + AT_rich Low_complexity Low_complexity 1 23 0 2560 156 53 3 chr2 6236284 6237021 -247019562 + L1PA16 LINE L1 6025 6849 -20 22 70 0 0 chr2 6237244 6237287 -247019296 + AT_rich Low_complexity Low_complexity 1 43 0 300 346 88 16 chr2 6238506 6238688 -247017895 + L2 LINE L2 3078 3272 0 227 227 0 0 chr2 6239465 6239509 -247017074 - L3 LINE CR1 -7 1570 1527 2232 109 3 0 chr2 6239714 6240007 -247016576 - AluSg SINE Alu -16 294 1 243 281 92 59 chr2 6240047 6240200 -247016383 - MIR3 SINE MIR -48 160 3 626 276 119 16 chr2 6240258 6240501 -247016082 + MLT1J LTR MaLR 1 268 -243 339 65 0 0 chr2 6240680 6240726 -247015857 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 27671 82 8 5 chr2 6240726 6245313 -247011270 - L1PA6 LINE L1 -24 6130 1532 35016 85 4 12 chr2 6245447 6250374 -247006209 - L1P2 LINE L1 -683 5471 591 1437 228 83 41 chr2 6250614 6251049 -247005534 + MLT1C LTR MaLR 8 460 -7 2054 168 90 30 chr2 6251376 6251776 -247004807 - MSTA LTR MaLR -4 424 1 319 253 183 84 chr2 6252173 6252375 -247004208 + MLT1J LTR MaLR 129 350 -161 3416 66 49 5 chr2 6252638 6253063 -247003520 - MLT2A1 LTR ERVL 0 444 1 266 309 57 16 chr2 6253263 6253457 -247003126 + L1ME4a LINE L1 5714 5915 -206 1873 102 4 8 chr2 6253468 6253724 -247002859 - AluSp SINE Alu -19 294 40 373 246 58 108 chr2 6254217 6254542 -247002041 + MER5C DNA MER1_type 14 322 -2 232 293 198 17 chr2 6255866 6255982 -247000601 - MIR SINE MIR -75 187 51 433 329 89 25 chr2 6256376 6256780 -246999803 - LTR16A LTR ERVL -13 437 8 1279 108 104 68 chr2 6257194 6257279 -246999304 - MER30 DNA MER1_type 0 230 150 2108 125 3 3 chr2 6257279 6257575 -246999008 - AluSc SINE Alu -13 296 1 1279 108 104 68 chr2 6257575 6257711 -246998872 - MER30 DNA MER1_type -80 150 1 185 373 27 9 chr2 6259584 6259694 -246996889 - MIR SINE MIR -85 177 66 589 289 17 6 chr2 6259958 6260131 -246996452 - MER5B DNA MER1_type -1 177 3 217 283 17 17 chr2 6260182 6260242 -246996341 - MER5A DNA MER1_type -16 173 114 440 360 47 64 chr2 6260493 6260965 -246995618 - L2 LINE L2 -1809 1505 1042 347 265 27 13 chr2 6261057 6261195 -246995388 + MLT1I LTR MaLR 73 181 -228 1008 269 88 7 chr2 6262052 6262168 -246994415 + MLT1A2 LTR MaLR 42 147 -227 252 0 0 0 chr2 6262168 6262196 -246994387 + (TG)n Simple_repeat Simple_repeat 1 28 0 1008 269 88 7 chr2 6262196 6262387 -246994196 + MLT1A2 LTR MaLR 147 374 0 218 114 0 23 chr2 6263289 6263333 -246993250 + (TC)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr2 6263333 6263355 -246993228 + (CA)n Simple_repeat Simple_repeat 1 22 0 393 264 155 29 chr2 6264429 6264630 -246991953 + MIR SINE MIR 3 213 -49 195 42 0 0 chr2 6264663 6264687 -246991896 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 801 31 0 0 chr2 6264688 6264784 -246991799 + (TCTA)n Simple_repeat Simple_repeat 4 99 0 302 67 22 0 chr2 6265073 6265118 -246991465 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 202 367 93 4 chr2 6265145 6265423 -246991160 + L3 LINE CR1 1128 1430 -147 438 318 42 42 chr2 6267700 6267936 -246988647 + MIR SINE MIR 21 256 -6 1320 88 0 0 chr2 6268298 6268468 -246988115 + AluY SINE Alu 126 295 -16 187 296 74 0 chr2 6269470 6269524 -246987059 - MER5B DNA MER1_type 0 178 121 38 22 0 0 chr2 6269967 6270012 -246986571 + AT_rich Low_complexity Low_complexity 1 45 0 2254 118 0 0 chr2 6270012 6270316 -246986267 + AluSc SINE Alu 3 306 -3 234 292 119 64 chr2 6270924 6271143 -246985440 + MIR SINE MIR 13 243 -19 793 219 39 0 chr2 6271415 6271620 -246984963 + L1MD2 LINE L1 5656 5868 -491 2299 95 0 0 chr2 6272564 6272870 -246983713 + AluY SINE Alu 1 306 -5 2079 90 62 3 chr2 6272906 6273195 -246983388 + AluSq SINE Alu 1 306 -7 394 274 15 22 chr2 6274738 6274873 -246981710 - MER94 DNA DNA 0 134 1 451 235 76 0 chr2 6275131 6275263 -246981320 - MER63 DNA MER1_type -276 786 19 12131 162 56 9 chr2 6276020 6278329 -246978254 - Tigger1 DNA MER2_type 0 2418 3 366 309 53 33 chr2 6278380 6278653 -246977930 - L1ME2 LINE L1 -4 6162 5879 1368 263 85 48 chr2 6278756 6279080 -246977503 - L1ME2 LINE L1 -277 5889 5578 2103 94 10 39 chr2 6279080 6279387 -246977196 - AluSg SINE Alu -11 299 2 1368 263 85 48 chr2 6279387 6280777 -246975806 - L1ME2 LINE L1 -588 5578 4124 26 0 0 0 chr2 6280795 6280821 -246975762 + AT_rich Low_complexity Low_complexity 1 26 0 293 274 105 0 chr2 6280821 6280945 -246975638 - L1ME2 LINE L1 -2210 3936 3800 22 70 0 0 chr2 6280974 6281017 -246975566 + AT_rich Low_complexity Low_complexity 1 43 0 29 60 0 0 chr2 6281422 6281472 -246975111 + AT_rich Low_complexity Low_complexity 1 50 0 442 177 14 34 chr2 6282069 6282216 -246974367 + CT-rich Low_complexity Low_complexity 1 144 0 820 126 6 27 chr2 6282216 6282399 -246974184 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 296 297 7 83 chr2 6282896 6283041 -246973542 + MIR SINE MIR 47 180 -82 408 348 45 8 chr2 6283114 6283361 -246973222 + LTR16A LTR ERVL 56 311 -139 237 65 0 0 chr2 6283366 6283397 -246973186 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 1768 147 53 3 chr2 6283400 6283685 -246972898 - AluSx SINE Alu -13 299 1 212 186 17 0 chr2 6284691 6284750 -246971833 + CT-rich Low_complexity Low_complexity 1 60 0 2184 132 6 0 chr2 6285173 6285484 -246971099 + AluSq SINE Alu 1 313 0 979 232 31 37 chr2 6285902 6286229 -246970354 - L1MB8 LINE L1 0 6178 5854 184 360 0 0 chr2 6286878 6286928 -246969655 + L2 LINE L2 3206 3255 -17 501 135 0 0 chr2 6286931 6287020 -246969563 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 210 139 0 70 chr2 6287020 6287063 -246969520 + (GGGGA)n Simple_repeat Simple_repeat 5 44 0 186 208 0 0 chr2 6287625 6287673 -246968910 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 234 31 62 chr2 6288601 6288665 -246967918 - L2 LINE L2 -11 3302 3241 444 330 62 20 chr2 6288702 6288919 -246967664 - MIR SINE MIR -1 261 37 3808 79 119 0 chr2 6290788 6290941 -246965642 - LTR66 LTR ERVL 0 610 477 327 113 0 0 chr2 6290941 6291003 -246965580 + (TA)n Simple_repeat Simple_repeat 2 63 0 3808 79 119 0 chr2 6291003 6291394 -246965189 - LTR66 LTR ERVL -133 477 1 27 0 0 0 chr2 6292235 6292262 -246964321 + AT_rich Low_complexity Low_complexity 1 27 0 226 294 43 22 chr2 6292601 6292693 -246963890 - MIR3 SINE MIR -6 202 109 27 29 0 0 chr2 6293056 6293090 -246963493 + AT_rich Low_complexity Low_complexity 1 34 0 1922 147 0 0 chr2 6293644 6293929 -246962654 + AluSg SINE Alu 1 285 -25 355 224 129 20 chr2 6293978 6294125 -246962458 + L1MDb LINE L1 1178 1340 -5069 5575 168 24 45 chr2 6295800 6297054 -246959529 - Tigger3b DNA MER2_type -3 1228 1 402 306 80 55 chr2 6298123 6298521 -246958062 + L2 LINE L2 1901 2308 -1006 895 229 89 50 chr2 6298867 6299225 -246957358 - MLT1A2 LTR MaLR -2 372 1 731 196 7 0 chr2 6300451 6300589 -246955994 - AluJb SINE Alu 0 312 174 2449 231 63 13 chr2 6300716 6301237 -246955346 - L1MB7 LINE L1 -101 6083 5590 2425 71 0 10 chr2 6301237 6301548 -246955035 - AluY SINE Alu -3 308 1 2449 231 63 13 chr2 6301548 6302275 -246954308 - L1MB7 LINE L1 -594 5590 4786 710 207 27 0 chr2 6302275 6302425 -246954158 - MLT1A1 LTR MaLR 0 365 212 1279 173 38 114 chr2 6302608 6302834 -246953749 + MLT1B LTR MaLR 1 182 -208 2060 139 0 3 chr2 6302834 6303137 -246953446 + AluSx SINE Alu 2 303 -9 1279 173 38 114 chr2 6303137 6303332 -246953251 + MLT1B LTR MaLR 182 390 0 713 179 20 4 chr2 6303851 6304107 -246952476 + (TG)n Simple_repeat Simple_repeat 1 260 0 2053 103 33 98 chr2 6306775 6306851 -246949732 - THE1B LTR MaLR 0 364 285 2075 127 14 0 chr2 6306851 6307142 -246949441 - AluSx SINE Alu -17 295 1 2053 103 33 98 chr2 6307142 6307454 -246949129 - THE1B LTR MaLR -79 285 1 265 286 53 85 chr2 6307547 6307714 -246948869 - MIR SINE MIR -27 235 73 1411 189 103 49 chr2 6307714 6308084 -246948499 - MLT1B LTR MaLR 0 390 1 265 286 53 85 chr2 6308084 6308105 -246948478 - MIR SINE MIR -189 73 53 213 298 53 0 chr2 6308318 6308375 -246948208 + MIR SINE MIR 1 60 -202 338 217 0 0 chr2 6308423 6308492 -246948091 - L2 LINE L2 -3 3310 3242 303 28 0 0 chr2 6309590 6309626 -246946957 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2567 50 0 0 chr2 6309629 6309930 -246946653 - AluY SINE Alu -10 301 1 697 150 36 7 chr2 6310850 6310990 -246945593 + L1PA15 LINE L1 6021 6164 -1 341 282 103 5 chr2 6311033 6311246 -246945337 + HAL1b LINE L1 260 493 -855 227 276 20 0 chr2 6311424 6311522 -246945061 + (TA)n Simple_repeat Simple_repeat 2 101 0 258 32 0 0 chr2 6311570 6311601 -246944982 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2165 100 11 0 chr2 6311603 6311882 -246944701 - AluSq SINE Alu -28 285 4 1863 182 42 25 chr2 6311927 6312277 -246944306 - L1PB4 LINE L1 0 6156 5796 234 62 0 0 chr2 6312277 6312309 -246944274 + (TG)n Simple_repeat Simple_repeat 2 33 0 1863 182 42 25 chr2 6312309 6312391 -246944192 - L1PB4 LINE L1 -360 5796 5717 225 65 0 0 chr2 6313100 6313131 -246943452 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2223 116 0 7 chr2 6313200 6313510 -246943073 + AluSq SINE Alu 1 308 -5 259 337 37 37 chr2 6313805 6313992 -246942591 + MIR SINE MIR 71 257 -5 651 236 21 82 chr2 6316083 6316316 -246940267 + MLT1A1 LTR MaLR 1 219 -146 242 248 31 39 chr2 6318104 6318233 -246938350 - L1ME LINE L1 -202 5919 5792 231 88 0 0 chr2 6318254 6318288 -246938295 + (TG)n Simple_repeat Simple_repeat 2 35 0 531 299 55 10 chr2 6318768 6318977 -246937606 - MIR SINE MIR -29 233 17 383 37 0 19 chr2 6319194 6319248 -246937335 + (TG)n Simple_repeat Simple_repeat 2 54 0 2239 96 33 7 chr2 6320340 6320642 -246935941 + AluSg SINE Alu 1 310 0 254 231 0 0 chr2 6320788 6320853 -246935730 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1682 166 39 34 chr2 6321000 6321356 -246935227 - MLT1A1 LTR MaLR -7 358 1 793 176 0 0 chr2 6321357 6321505 -246935078 - L1MB1 LINE L1 -17 6151 6004 411 183 0 0 chr2 6321568 6321650 -246934933 + AluJ/FRAM SINE Alu 222 303 -9 199 383 8 39 chr2 6321948 6322076 -246934507 + L2 LINE L2 3148 3271 -1 744 171 8 0 chr2 6323004 6323127 -246933456 + FLAM_C SINE Alu 2 125 -8 274 371 61 0 chr2 6323279 6323411 -246933172 + MIR SINE MIR 53 192 -70 231 170 0 0 chr2 6323482 6323529 -246933054 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 308 48 14 chr2 6323956 6324102 -246932481 + MER5B DNA MER1_type 28 178 0 193 296 14 28 chr2 6324179 6324250 -246932333 + L2 LINE L2 3194 3263 -9 1143 281 132 14 chr2 6324645 6325162 -246931421 - L2 LINE L2 -575 2739 2162 401 283 121 38 chr2 6325880 6326226 -246930357 + LTR16A1 LTR ERVL 71 445 -12 2270 108 7 0 chr2 6326376 6326683 -246929900 + AluSg SINE Alu 1 309 -1 1768 177 29 13 chr2 6327477 6327860 -246928723 + MLT2B1 LTR ERVL 2 436 -79 184 57 29 29 chr2 6327867 6327902 -246928681 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 21 71 0 0 chr2 6328334 6328376 -246928207 + AT_rich Low_complexity Low_complexity 1 42 0 268 385 39 26 chr2 6330266 6330422 -246926161 + MIR SINE MIR 15 172 -90 2238 169 26 28 chr2 6331609 6332036 -246924547 + MSTB LTR MaLR 1 426 0 1093 232 14 21 chr2 6332106 6332386 -246924197 + MLT1A1 LTR MaLR 1 278 -87 2314 106 0 0 chr2 6332512 6332814 -246923769 + AluSx SINE Alu 1 302 -10 461 268 176 0 chr2 6332825 6332967 -246923616 - MER96 DNA MER1_type? -1 174 8 508 296 36 13 chr2 6333340 6333647 -246922936 + L1M4 LINE L1 3387 3700 -2446 235 138 0 52 chr2 6333662 6333720 -246922863 + (TA)n Simple_repeat Simple_repeat 1 55 0 560 247 71 61 chr2 6333729 6334025 -246922558 + L1M4 LINE L1 3719 4017 -2129 1721 161 32 7 chr2 6334121 6334424 -246922159 - AluJb SINE Alu 0 310 1 1684 242 138 9 chr2 6334541 6335236 -246921347 + L1M4 LINE L1 4493 5277 -869 6208 186 17 5 chr2 6335244 6337074 -246919509 + L1P5 LINE L1 3823 5679 -472 480 191 40 0 chr2 6337175 6337301 -246919282 + GA-rich Low_complexity Low_complexity 4 134 0 2100 122 0 7 chr2 6337423 6337718 -246918865 + AluSx SINE Alu 1 293 -19 5163 245 32 38 chr2 6338120 6339239 -246917344 + L1M4 LINE L1 20 1277 -5477 2084 131 0 0 chr2 6339239 6339541 -246917042 + AluSx SINE Alu 1 302 0 5163 245 32 38 chr2 6339541 6340183 -246916400 + L1M4 LINE L1 1277 1921 -4833 3621 230 111 67 chr2 6340215 6341647 -246914936 + L1MDa LINE L1 35 1542 -4998 1800 172 143 8 chr2 6341647 6342024 -246914559 - MSTA LTR MaLR 0 428 1 3621 230 111 67 chr2 6342024 6342140 -246914443 + L1MDa LINE L1 1542 1651 -4889 2310 270 54 46 chr2 6342171 6343869 -246912714 - L1PA12 LINE L1 -5608 1973 1 312 167 61 0 chr2 6343968 6344034 -246912549 - L1MDa LINE L1 -6436 104 35 23 0 0 0 chr2 6345917 6345940 -246910643 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 6346210 6346232 -246910351 + AT_rich Low_complexity Low_complexity 1 22 0 566 289 39 81 chr2 6347660 6347992 -246908591 + MLT1H LTR MaLR 37 354 -195 4064 215 42 82 chr2 6349909 6351414 -246905169 - Charlie1a DNA MER1_type -4 1451 6 214 306 145 40 chr2 6352553 6352677 -246903906 + L2 LINE L2 3136 3272 0 1882 256 49 18 chr2 6352976 6353479 -246903104 - L1 LINE L1 -2580 3566 3080 2046 147 86 18 chr2 6353479 6353874 -246902709 - MSTB LTR MaLR -4 422 1 1882 256 49 18 chr2 6353874 6354371 -246902212 - L1 LINE L1 -3066 3080 2498 1487 239 121 63 chr2 6354368 6354955 -246901628 - L1M4b LINE L1 -6219 640 20 * 379 335 107 5 chr2 6356914 6357120 -246899463 + MIR SINE MIR 31 257 -5 705 73 0 0 chr2 6357812 6357908 -246898675 + (TA)n Simple_repeat Simple_repeat 2 97 0 275 257 67 0 chr2 6358343 6358448 -246898135 + MARNA DNA Mariner 461 572 -14 23 68 0 0 chr2 6359038 6359082 -246897501 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 6359546 6359576 -246897007 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 6359697 6359725 -246896858 + AT_rich Low_complexity Low_complexity 1 28 0 223 306 61 20 chr2 6359945 6360043 -246896540 - MIR SINE MIR -95 167 66 258 400 40 0 chr2 6361658 6361783 -246894800 - L2 LINE L2 -237 3035 2906 1270 187 239 16 chr2 6361847 6362227 -246894356 - MER31B LTR ERV1 -1 465 1 181 281 73 31 chr2 6362253 6362349 -246894234 - L2 LINE L2 -480 2834 2735 366 332 75 11 chr2 6363094 6363281 -246893302 + MIR SINE MIR 53 251 -11 212 175 25 0 chr2 6364104 6364144 -246892439 + CT-rich Low_complexity Low_complexity 1 41 0 210 208 75 0 chr2 6364864 6364917 -246891666 - MIR SINE MIR -142 120 64 194 333 25 37 chr2 6364953 6365034 -246891549 + MIR SINE MIR 63 142 -120 3779 113 53 14 chr2 6365266 6365947 -246890636 - L1MA3 LINE L1 0 6305 5643 4119 106 48 100 chr2 6365310 6365493 -246891090 - L1MA3 LINE L1 -44 6261 6070 269 68 23 0 chr2 6365493 6365537 -246891046 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 4119 106 48 100 chr2 6365537 6365947 -246890636 - L1MA3 LINE L1 -235 6070 5655 255 217 0 0 chr2 6365947 6366007 -246890576 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 4119 106 48 100 chr2 6366007 6366146 -246890437 - L1MA3 LINE L1 -650 5655 5510 217 341 57 16 chr2 6366882 6367005 -246889578 + MIR SINE MIR 67 194 -68 1994 113 60 0 chr2 6367007 6367291 -246889292 + AluSx SINE Alu 1 301 -11 1473 190 10 14 chr2 6367571 6367860 -246888723 + AluJo SINE Alu 1 288 -24 30 45 0 0 chr2 6367860 6367904 -246888679 + AT_rich Low_complexity Low_complexity 1 44 0 203 240 93 40 chr2 6368048 6368123 -246888460 + L2 LINE L2 3234 3312 -1 186 103 0 0 chr2 6368173 6368202 -246888381 + (TG)n Simple_repeat Simple_repeat 2 30 0 2181 105 7 0 chr2 6368549 6368835 -246887748 + AluSx SINE Alu 1 288 -24 380 326 17 12 chr2 6370252 6370424 -246886159 - MLT1L LTR MaLR 0 615 443 359 258 75 0 chr2 6371999 6372092 -246884491 - MER45A DNA AcHobo -53 125 26 313 315 26 3 chr2 6372165 6372329 -246884254 + MIR SINE MIR 45 211 -51 2432 68 3 3 chr2 6372676 6372987 -246883596 + AluY SINE Alu 1 311 0 1807 161 39 86 chr2 6373005 6373389 -246883194 + MER47A DNA MER2_type 1 366 0 2132 110 0 0 chr2 6374177 6374485 -246882098 - AluY SINE Alu 0 308 1 33 0 0 0 chr2 6378053 6378086 -246878497 + AT_rich Low_complexity Low_complexity 1 33 0 182 333 48 0 chr2 6378221 6378284 -246878299 - MIR SINE MIR -119 143 78 2418 238 67 12 chr2 6378530 6379127 -246877456 - LTR27 LTR ERV1 0 636 7 1652 171 14 73 chr2 6379300 6379669 -246876914 - MLT1B LTR MaLR 0 390 44 278 250 0 0 chr2 6380182 6380242 -246876341 + MIR SINE MIR 87 146 -62 279 314 69 10 chr2 6380374 6380476 -246876107 - MIR SINE MIR -48 214 107 23 0 0 0 chr2 6382279 6382302 -246874281 + AT_rich Low_complexity Low_complexity 1 23 0 199 338 0 15 chr2 6384045 6384113 -246872470 - MIR SINE MIR -76 186 120 294 274 96 37 chr2 6386436 6386571 -246870012 + MIR3 SINE MIR 63 205 -3 333 315 19 9 chr2 6386755 6386863 -246869720 + L2 LINE L2 3154 3262 -51 241 47 156 16 chr2 6386916 6386980 -246869603 + (TTAAA)n Simple_repeat Simple_repeat 4 76 0 327 191 0 32 chr2 6387280 6387406 -246869177 + GA-rich Low_complexity Low_complexity 3 124 0 1465 191 28 3 chr2 6387429 6387712 -246868871 + AluJo SINE Alu 9 298 -14 809 51 5 82 chr2 6387747 6387942 -246868641 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 276 163 0 50 chr2 6387926 6388006 -246868577 + GA-rich Low_complexity Low_complexity 3 78 0 * 234 0 0 0 chr2 6388153 6388179 -246868404 + (TA)n Simple_repeat Simple_repeat 2 27 0 387 317 42 7 chr2 6389136 6389278 -246867305 + MIR SINE MIR 7 153 -109 2249 110 3 7 chr2 6392828 6393137 -246863446 - AluSq SINE Alu -5 308 1 693 290 157 34 chr2 6394603 6395010 -246861573 - LTR16B LTR ERVL -1 463 7 2384 138 119 8 chr2 6397457 6397842 -246858741 - MSTA LTR MaLR 0 428 1 439 331 82 5 chr2 6398013 6398197 -246858386 - L2 LINE L2 -163 3109 2912 259 150 33 0 chr2 6398222 6398282 -246858301 + CT-rich Low_complexity Low_complexity 3 64 0 1910 197 110 22 chr2 6398290 6398792 -246857791 - LTR10B LTR ERV1 -1 546 1 270 253 179 0 chr2 6398922 6399017 -246857566 - MLT1D LTR MaLR 0 505 394 370 313 96 34 chr2 6399342 6399894 -246856689 - L1ME3A LINE L1 -239 5931 5346 27 29 0 0 chr2 6400072 6400106 -246856477 + AT_rich Low_complexity Low_complexity 1 34 0 426 302 101 28 chr2 6400134 6400422 -246856161 - L1ME3A LINE L1 -1108 5038 4730 2260 113 0 0 chr2 6400448 6400749 -246855834 - AluSq SINE Alu -12 301 1 227 286 160 45 chr2 6400846 6401047 -246855536 + MIR SINE MIR 36 256 -6 21 0 0 0 chr2 6401122 6401143 -246855440 + AT_rich Low_complexity Low_complexity 1 21 0 202 321 136 31 chr2 6401690 6401852 -246854731 - MIR SINE MIR -6 256 78 1401 208 71 75 chr2 6401855 6402322 -246854261 - MLT1C LTR MaLR -2 465 1 345 47 0 0 chr2 6402333 6402376 -246854207 + (TG)n Simple_repeat Simple_repeat 2 44 0 398 336 39 50 chr2 6402540 6402799 -246853784 + L3 LINE CR1 836 1091 -486 225 245 43 43 chr2 6402799 6402893 -246853690 - MLT1J1 LTR MaLR 0 446 353 1585 211 38 30 chr2 6402904 6403274 -246853309 + MLT1A2 LTR MaLR 2 374 0 2494 67 3 0 chr2 6404606 6404906 -246851677 - AluY SINE Alu -10 301 1 262 279 38 13 chr2 6405316 6405395 -246851188 - MLT1G LTR MaLR -503 87 7 954 151 0 0 chr2 6405669 6405821 -246850762 + L1PBa LINE L1 3 154 -6709 430 176 12 0 chr2 6405887 6405972 -246850611 + L1PBa LINE L1 856 941 -5922 7316 208 17 3 chr2 6406064 6408191 -246848392 + L1PBa LINE L1 177 1644 -5219 227 88 29 0 chr2 6408191 6408225 -246848358 + MSTA LTR MaLR 1 35 -393 203 274 96 59 chr2 6408701 6408836 -246847747 + MER5B DNA MER1_type 5 144 -34 286 214 87 29 chr2 6408721 6408824 -246847759 - MER5A DNA MER1_type -22 167 59 2321 100 0 0 chr2 6409049 6409350 -246847233 + AluSx SINE Alu 1 301 -11 2807 145 59 11 chr2 6411159 6411684 -246844899 + Tigger3(Golem) DNA MER2_type 2478 3027 -2 328 202 16 57 chr2 6411684 6411807 -246844776 - Charlie2 DNA MER1_type -507 2355 2238 523 297 72 14 chr2 6411903 6412112 -246844471 - Charlie2 DNA MER1_type -2534 248 28 1877 207 71 7 chr2 6412580 6412985 -246843598 + MLT2C2 LTR ERVL 3 534 -20 361 244 47 0 chr2 6412995 6413081 -246843502 - L1MC4 LINE L1 -1339 6703 6614 302 183 0 17 chr2 6413052 6413112 -246843471 - L1MCa LINE L1 -4362 2064 2006 * 401 326 102 5 chr2 6413169 6413365 -246843218 + MIR SINE MIR 23 237 -25 265 137 63 105 chr2 6413936 6414031 -246842552 + L2 LINE L2 3117 3207 -106 344 229 0 0 chr2 6414509 6414579 -246842004 + MIR SINE MIR 86 155 -107 286 174 0 10 chr2 6414587 6414656 -246841927 - MLT2D LTR ERVL -2 412 367 738 209 10 19 chr2 6414656 6415074 -246841509 + (CATATA)n Simple_repeat Simple_repeat 1 414 0 225 231 0 0 chr2 6415074 6415126 -246841457 - L1MC4 LINE L1 -1343 6699 6648 585 173 27 0 chr2 6415128 6415278 -246841305 + (CATATA)n Simple_repeat Simple_repeat 4 157 0 2088 189 16 7 chr2 6415278 6415660 -246840923 - MLT2D LTR ERVL -40 480 1 1012 231 19 64 chr2 6417219 6417656 -246838927 + L1MA9 LINE L1 5861 6274 -38 281 26 26 0 chr2 6417738 6417776 -246838807 + (CA)n Simple_repeat Simple_repeat 2 40 0 1019 282 61 22 chr2 6418352 6418841 -246837742 - MLT1H LTR MaLR -41 508 1 307 282 34 8 chr2 6419286 6419403 -246837180 - MLT1I LTR MaLR 0 409 290 552 215 66 0 chr2 6419515 6419636 -246836947 + FLAM_A SINE Alu 1 129 -4 259 196 0 0 chr2 6421819 6421865 -246834718 + L2 LINE L2 3261 3306 -7 291 326 120 23 chr2 6421880 6422191 -246834392 - L2 LINE L2 -2 3270 2871 183 266 0 0 chr2 6422201 6422265 -246834318 + (TTCA)n Simple_repeat Simple_repeat 3 66 0 2789 239 73 10 chr2 6422465 6423700 -246832883 + Charlie1a DNA MER1_type 1 1384 -71 546 278 107 37 chr2 6423968 6424043 -246832540 - MIR SINE MIR -29 233 165 2594 110 6 3 chr2 6424043 6424406 -246832177 + THE1B LTR MaLR 1 364 0 546 278 107 37 chr2 6424406 6424546 -246832037 - MIR SINE MIR -97 165 3 193 239 0 0 chr2 6425407 6425453 -246831130 + MER5A DNA MER1_type 122 167 -22 1228 228 19 42 chr2 6426302 6426662 -246829921 + MLT1A1 LTR MaLR 1 352 -13 306 332 78 29 chr2 6426940 6427145 -246829438 - L1MC/D LINE L1 -2336 5472 5258 281 301 15 15 chr2 6427337 6427472 -246829111 - L1MC/D LINE L1 -1111 5035 4901 358 248 120 77 chr2 6427513 6427864 -246828719 - L1MC/D LINE L1 -1316 4830 4465 1033 145 6 0 chr2 6427900 6428066 -246828517 - AluSg/x SINE Alu -5 305 139 515 325 34 30 chr2 6428071 6428366 -246828217 - L1MC/D LINE L1 -1730 4416 4121 747 176 124 9 chr2 6428367 6428577 -246828006 + MER44D DNA MER2_type 2 505 -104 2495 151 31 7 chr2 6428579 6428995 -246827588 - MSTA LTR MaLR -2 426 1 988 154 6 0 chr2 6428999 6429155 -246827428 + AluSg/x SINE Alu 147 303 -9 1706 131 95 0 chr2 6429361 6429644 -246826939 + AluSx SINE Alu 1 310 -2 283 146 45 22 chr2 6430279 6430368 -246826215 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 379 301 70 7 chr2 6430996 6431139 -246825444 + MER5B DNA MER1_type 1 152 -26 189 0 0 0 chr2 6431294 6431315 -246825268 + (T)n Simple_repeat Simple_repeat 1 21 0 207 243 29 0 chr2 6431798 6431868 -246824715 + (TA)n Simple_repeat Simple_repeat 2 73 0 247 321 89 0 chr2 6432057 6432169 -246824414 - MIR SINE MIR -70 192 71 356 47 0 0 chr2 6433742 6433785 -246822798 + (TG)n Simple_repeat Simple_repeat 2 44 0 209 338 15 0 chr2 6434649 6434717 -246821866 + MIR3 SINE MIR 137 205 -3 944 185 11 5 chr2 6434841 6435030 -246821553 - MLT2C1 LTR ERVL -54 343 154 1144 214 143 31 chr2 6435040 6435396 -246821187 - MSTD LTR MaLR 0 396 1 1119 239 49 3 chr2 6435396 6435701 -246820882 - MSTD-int LTR MaLR 0 1735 1417 1411 163 71 37 chr2 6435701 6436027 -246820556 + THE1C LTR MaLR 1 337 -38 3090 250 114 37 chr2 6436145 6437336 -246819247 - MSTD-int LTR MaLR -369 1282 1 1307 241 84 45 chr2 6437336 6437717 -246818866 - MSTD LTR MaLR 0 396 1 804 140 7 0 chr2 6437717 6437860 -246818723 - MLT2C2 LTR ERVL -316 148 5 334 222 13 6 chr2 6438689 6438847 -246817736 + GA-rich Low_complexity Low_complexity 1 159 0 2171 130 0 0 chr2 6439106 6439413 -246817170 + AluSx SINE Alu 5 311 -1 517 271 47 96 chr2 6439730 6440117 -246816466 + LTR16B LTR ERVL 84 451 -13 437 278 28 0 chr2 6440123 6440231 -246816352 - MER81 DNA DNA -2 112 2 222 308 187 19 chr2 6440682 6440789 -246815794 - L2 LINE L2 -1 3271 3147 210 128 0 0 chr2 6440862 6440901 -246815682 + (TTA)n Simple_repeat Simple_repeat 3 41 0 246 399 35 35 chr2 6440933 6441136 -246815447 - L2 LINE L2 -244 3028 2826 1007 184 0 24 chr2 6441169 6441376 -246815207 + MLT1A1 LTR MaLR 1 202 -163 1849 181 49 0 chr2 6441407 6441755 -246814828 - MLT1A1 LTR MaLR 0 365 1 189 274 42 74 chr2 6442654 6442749 -246813834 - MIR SINE MIR -108 154 63 322 269 99 41 chr2 6443114 6443285 -246813298 + MLT1J2 LTR MaLR 270 450 0 304 360 124 22 chr2 6443299 6443574 -246813009 + L2 LINE L2 2571 2873 -441 2312 63 11 0 chr2 6443661 6443947 -246812636 - AluY SINE Alu -22 289 1 2488 185 55 72 chr2 6443947 6444868 -246811715 + MER63C DNA MER1_type 11 836 -224 1603 164 20 49 chr2 6444868 6445173 -246811410 + AluJb SINE Alu 1 296 -16 2488 185 55 72 chr2 6445173 6445265 -246811318 + MER63C DNA MER1_type 836 928 -2 218 378 72 9 chr2 6445282 6445393 -246811190 + L2 LINE L2 2948 3065 -207 1386 234 121 59 chr2 6446090 6446769 -246809814 + MER50 LTR ERV1 14 734 0 263 414 21 21 chr2 6447094 6447285 -246809298 + MIR SINE MIR 47 237 -25 24 0 0 0 chr2 6447377 6447401 -246809182 + AT_rich Low_complexity Low_complexity 1 24 0 782 230 59 59 chr2 6447546 6447768 -246808815 + MIR SINE MIR 15 236 -26 2443 119 11 16 chr2 6447905 6448282 -246808301 - THE1C LTR MaLR 0 375 1 803 202 62 31 chr2 6448696 6448953 -246807630 + MER97b DNA MER1_type? 47 311 -742 3058 133 16 4 chr2 6448980 6449493 -246807090 - L1PA16 LINE L1 -140 6026 5508 8908 86 5 13 chr2 6449601 6450884 -246805699 - L1P3 LINE L1 -5188 1273 2 222 182 26 13 chr2 6451217 6451294 -246805289 + (TG)n Simple_repeat Simple_repeat 1 78 0 22 35 0 0 chr2 6451734 6451763 -246804820 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 6451807 6451829 -246804754 + AT_rich Low_complexity Low_complexity 1 22 0 726 155 17 28 chr2 6452849 6453030 -246803553 + GA-rich Low_complexity Low_complexity 2 180 0 22 35 0 0 chr2 6455085 6455114 -246801469 + AT_rich Low_complexity Low_complexity 1 29 0 1127 267 114 27 chr2 6456390 6457177 -246799406 + HAL1 LINE L1 1036 1891 -616 378 242 104 30 chr2 6458090 6458321 -246798262 - L1ME4a LINE L1 -257 5864 5617 225 296 12 0 chr2 6458486 6458567 -246798016 - L1ME4a LINE L1 -929 5404 5323 200 362 140 9 chr2 6458768 6458989 -246797594 + L2 LINE L2 2436 2685 -629 531 235 75 30 chr2 6459112 6459539 -246797044 + MLT1C LTR MaLR 6 467 0 3096 86 7 18 chr2 6459643 6460098 -246796485 - L1PA13 LINE L1 -4 6159 5710 204 233 0 0 chr2 6460575 6460618 -246795965 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 456 277 119 45 chr2 6460674 6461252 -246795331 - L1ME4a LINE L1 -238 5883 5263 802 165 170 6 chr2 6461325 6461507 -246795076 - Tigger5 DNA MER2_type 0 2323 2112 1040 257 55 3 chr2 6461512 6461804 -246794779 - Tigger5 DNA MER2_type -2016 307 1 1881 110 18 18 chr2 6465615 6465917 -246790666 - AluSg SINE Alu 0 302 1 2020 135 0 0 chr2 6466206 6466509 -246790074 - AluSx SINE Alu 0 303 1 28 0 0 0 chr2 6467077 6467105 -246789478 + AT_rich Low_complexity Low_complexity 1 28 0 851 151 20 0 chr2 6469092 6469244 -246787339 + MLT2D LTR ERVL 1 155 -259 229 143 143 18 chr2 6469311 6469367 -246787216 - MLT2C2 LTR ERVL -285 179 117 * 1005 209 34 34 chr2 6469331 6469599 -246786984 + MLT2D LTR ERVL 145 412 -2 1159 221 130 54 chr2 6469649 6470099 -246786484 + MLT2B1 LTR ERVL 1 492 -28 324 0 0 0 chr2 6470099 6470135 -246786448 + (CA)n Simple_repeat Simple_repeat 2 37 0 1159 221 130 54 chr2 6470135 6470167 -246786416 + MLT2B1 LTR ERVL 492 520 0 188 358 59 64 chr2 6470211 6470415 -246786168 - L2 LINE L2 -113 3159 2957 28 48 0 0 chr2 6471276 6471318 -246785265 + AT_rich Low_complexity Low_complexity 1 42 0 5859 119 67 2 chr2 6471660 6472757 -246783826 - L1PBa LINE L1 -4016 2847 1680 1277 103 0 0 chr2 6472857 6473031 -246783552 + AluY SINE Alu 138 311 0 1506 134 0 0 chr2 6473388 6473604 -246782979 - AluY SINE Alu -13 298 83 994 192 0 0 chr2 6475095 6475262 -246781321 - FRAM SINE Alu -9 167 1 324 371 102 15 chr2 6475608 6475813 -246780770 + MIR SINE MIR 40 262 0 275 328 123 0 chr2 6476296 6476418 -246780165 - MIR SINE MIR -76 186 50 228 238 0 48 chr2 6477858 6477921 -246778662 + GA-rich Low_complexity Low_complexity 3 62 0 5900 196 48 11 chr2 6478322 6479447 -246777136 + L1 LINE L1 3180 4377 -1769 635 289 24 14 chr2 6479447 6479655 -246776928 - MER6B DNA MER2_type 0 210 1 5900 196 48 11 chr2 6479655 6480036 -246776547 + L1 LINE L1 4377 4742 -1404 4742 253 100 58 chr2 6480048 6482161 -246774422 - L1MDa LINE L1 -4336 2204 3 23 68 0 0 chr2 6482366 6482410 -246774173 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 6482843 6482869 -246773714 + AT_rich Low_complexity Low_complexity 1 26 0 426 272 109 22 chr2 6483729 6483913 -246772670 - MIR SINE MIR -15 247 48 422 288 14 63 chr2 6485428 6485650 -246770933 - L2 LINE L2 0 3313 3103 590 159 0 65 chr2 6485677 6485784 -246770799 + AluSq/x SINE Alu 14 113 -199 1004 73 15 0 chr2 6485784 6485920 -246770663 - THE1C LTR MaLR 0 375 238 825 243 136 20 chr2 6485932 6486372 -246770211 - L1M4 LINE L1 -2098 4048 3558 1245 114 15 0 chr2 6486375 6486576 -246770007 - L1MA3 LINE L1 0 6305 6102 4676 210 29 66 chr2 6486577 6488367 -246768216 - L1 LINE L1 -827 6738 5115 2192 119 3 0 chr2 6488367 6488670 -246767913 + AluSp SINE Alu 1 304 -9 4676 210 29 66 chr2 6488670 6488976 -246767607 - L1 LINE L1 -2450 5115 4799 960 93 8 0 chr2 6488980 6489109 -246767474 - AluSc SINE Alu -15 294 165 782 219 60 17 chr2 6489109 6489411 -246767172 - L1 LINE L1 -2759 4806 4492 6568 75 1 4 chr2 6489540 6490765 -246765818 - L1PA7 LINE L1 -29 6125 4906 13340 183 36 9 chr2 6490770 6493320 -246763263 - L1 LINE L1 -4936 2629 11 354 284 21 76 chr2 6493411 6493940 -246762643 - L1M4 LINE L1 -2696 3450 2951 26 50 0 0 chr2 6494630 6494670 -246761913 + AT_rich Low_complexity Low_complexity 1 40 0 210 264 0 0 chr2 6495753 6495806 -246760777 + L2 LINE L2 3203 3255 -17 263 279 67 19 chr2 6497147 6497251 -246759332 - MIR SINE MIR -64 144 36 392 295 26 58 chr2 6497252 6497408 -246759175 + MIR SINE MIR 56 206 -56 239 418 112 16 chr2 6497511 6497760 -246758823 - L2 LINE L2 -40 3232 2960 1521 259 87 26 chr2 6497864 6498523 -246758060 - L1ME1 LINE L1 -114 6052 5354 194 193 18 0 chr2 6498523 6498580 -246758003 + (TA)n Simple_repeat Simple_repeat 1 58 0 1352 210 127 131 chr2 6498590 6499262 -246757321 - L1ME1 LINE L1 -797 5349 4561 697 213 0 0 chr2 6499262 6499384 -246757199 + FAM SINE Alu 21 142 -43 1352 210 127 131 chr2 6499384 6499748 -246756835 - L1ME1 LINE L1 -1585 4561 4197 524 290 134 13 chr2 6499748 6500055 -246756528 - L1M4 LINE L1 -1833 4313 3970 28 29 0 0 chr2 6500163 6500198 -246756385 + AT_rich Low_complexity Low_complexity 1 35 0 1076 205 101 14 chr2 6500435 6500713 -246755870 - MER58B DNA MER1_type -4 337 36 1986 212 8 32 chr2 6502058 6502529 -246754054 - MLT1C LTR MaLR 0 467 8 456 321 63 66 chr2 6503575 6503971 -246752612 - L2 LINE L2 -28 3244 2850 25 51 0 0 chr2 6504252 6504291 -246752292 + AT_rich Low_complexity Low_complexity 1 39 0 314 276 11 0 chr2 6504856 6504943 -246751640 + MIR SINE MIR 7 94 -168 193 290 93 28 chr2 6505283 6505390 -246751193 + MIR SINE MIR 32 145 -63 243 244 0 0 chr2 6505785 6505839 -246750744 + MIR SINE MIR 71 124 -84 340 343 43 60 chr2 6506392 6506625 -246749958 - L3 LINE CR1 -208 1369 1141 191 36 36 0 chr2 6507094 6507122 -246749461 + (CA)n Simple_repeat Simple_repeat 1 29 0 256 333 0 46 chr2 6507888 6507996 -246748587 - L3 LINE CR1 -320 1257 1155 346 368 51 31 chr2 6508054 6508407 -246748176 - L3 LINE CR1 -552 1025 666 1256 67 0 0 chr2 6508878 6509028 -246747555 + AluSq/x SINE Alu 1 150 -163 1238 111 6 18 chr2 6509129 6509300 -246747283 - AluSq SINE Alu -133 180 12 192 302 0 0 chr2 6509794 6509847 -246746736 + MIR3 SINE MIR 113 165 -43 241 313 130 9 chr2 6510410 6510525 -246746058 + MLT1H1 LTR MaLR 102 230 -325 * 265 228 32 65 chr2 6510521 6510644 -246745939 + MLT1F1 LTR MaLR 443 561 -6 201 250 0 0 chr2 6510932 6510976 -246745607 + L3b LINE CR1 1532 1575 -8 198 0 0 0 chr2 6512417 6512439 -246744144 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 317 243 117 10 chr2 6512907 6513010 -246743573 - MIR SINE MIR -65 143 30 278 343 43 7 chr2 6513697 6513837 -246742746 + MIR SINE MIR 51 195 -67 1479 378 25 5 chr2 6514319 6514687 -246741896 - THE1C LTR MaLR 0 375 1 342 281 75 50 chr2 6514692 6514852 -246741731 - MIR SINE MIR -12 250 87 5409 206 51 23 chr2 6515186 6516370 -246740213 - L1MC1 LINE L1 -2 6331 5181 2023 131 34 0 chr2 6516370 6516661 -246739922 + AluSx SINE Alu 1 301 -11 5409 206 51 23 chr2 6516661 6517346 -246739237 - L1MC1 LINE L1 -1152 5181 4395 1448 228 72 20 chr2 6517346 6517693 -246738890 + MLT1A1 LTR MaLR 1 365 0 5409 206 51 23 chr2 6517693 6518095 -246738488 - L1MC1 LINE L1 -1938 4395 4005 1926 149 0 34 chr2 6518986 6519308 -246737275 - AluSx SINE Alu -1 311 1 465 34 0 0 chr2 6519419 6519478 -246737105 + (CA)n Simple_repeat Simple_repeat 1 59 0 230 258 32 0 chr2 6519944 6520006 -246736577 + GA-rich Low_complexity Low_complexity 1 64 0 238 294 65 0 chr2 6520830 6520922 -246735661 - MIR SINE MIR -41 221 124 306 259 120 0 chr2 6521206 6521314 -246735269 - L1ME LINE L1 -440 5681 5561 268 172 0 31 chr2 6522538 6522602 -246733981 + MER5A DNA MER1_type 43 104 -85 21 0 0 0 chr2 6523895 6523916 -246732667 + AT_rich Low_complexity Low_complexity 1 21 0 236 256 35 35 chr2 6524014 6524100 -246732483 - L2 LINE L2 -185 3087 3002 466 311 42 33 chr2 6525086 6525298 -246731285 - MIR SINE MIR -3 259 46 404 325 57 31 chr2 6526826 6527054 -246729529 + MIR SINE MIR 18 251 -11 187 354 25 0 chr2 6527934 6528013 -246728570 + L2 LINE L2 3187 3267 -5 344 196 27 20 chr2 6528682 6528830 -246727753 + (CA)n Simple_repeat Simple_repeat 1 149 0 272 97 42 14 chr2 6528856 6528928 -246727655 + (CA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr2 6529494 6529516 -246727067 + AT_rich Low_complexity Low_complexity 1 22 0 1668 235 15 50 chr2 6529653 6530176 -246726407 - MLT1D LTR MaLR 0 505 1 214 292 42 25 chr2 6530821 6530941 -246725642 - MIR SINE MIR -120 142 21 320 290 8 40 chr2 6533313 6533437 -246723146 + MIR SINE MIR 34 153 -109 21 36 0 0 chr2 6533462 6533490 -246723093 + AT_rich Low_complexity Low_complexity 1 28 0 1481 195 8 69 chr2 6535456 6535845 -246720738 - MLT1A1 LTR MaLR 0 365 1 204 329 0 0 chr2 6536254 6536333 -246720250 + G-rich Low_complexity Low_complexity 1 79 0 234 62 0 0 chr2 6536705 6536737 -246719846 + (TAA)n Simple_repeat Simple_repeat 1 32 0 202 286 0 0 chr2 6537798 6537868 -246718715 + A-rich Low_complexity Low_complexity 1 70 0 273 179 21 32 chr2 6537993 6538088 -246718495 + T-rich Low_complexity Low_complexity 2 95 0 287 333 23 57 chr2 6538269 6538533 -246718050 + L2 LINE L2 2841 3095 -177 244 203 0 47 chr2 6538579 6538643 -246717940 + L2 LINE L2 3187 3247 -25 588 308 68 8 chr2 6539410 6539647 -246716936 - MIR SINE MIR -11 251 1 7942 179 17 23 chr2 6541067 6542617 -246713966 - LTR25-int LTR ERV1 -5197 1799 259 484 138 11 53 chr2 6542621 6542715 -246713868 - LTR25-int LTR ERV1 -6905 91 2 4567 139 55 4 chr2 6542733 6543485 -246713098 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6544530 6544573 -246712010 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6545982 6546144 -246710439 - MIR SINE MIR -2 260 92 529 318 23 9 chr2 6546316 6546533 -246710050 + MIR SINE MIR 5 224 -38 259 368 48 0 chr2 6546726 6546851 -246709732 + MIR SINE MIR 20 150 -112 186 302 83 0 chr2 6546967 6547063 -246709520 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6547626 6547689 -246708894 + AT_rich Low_complexity Low_complexity 1 63 0 2270 108 3 0 chr2 6548771 6549066 -246707517 - AluSx SINE Alu -16 296 1 1971 89 11 4 chr2 6549475 6549746 -246706837 + AluY SINE Alu 39 311 0 1465 161 62 40 chr2 6549754 6550058 -246706525 + AluJo SINE Alu 1 311 -1 245 106 0 43 chr2 6550457 6550504 -246706079 + (GGAA)n Simple_repeat Simple_repeat 3 47 0 199 274 32 0 chr2 6550542 6550604 -246705979 + MIR SINE MIR 159 222 -40 185 158 132 0 chr2 6555012 6555050 -246701533 + MIR SINE MIR 81 123 -85 2387 134 8 21 chr2 6556940 6557320 -246699263 + THE1C LTR MaLR 1 375 0 205 284 142 45 chr2 6559132 6559266 -246697317 + L2 LINE L2 3166 3312 -1 228 325 13 0 chr2 6560242 6560319 -246696264 - MIR SINE MIR -108 154 77 199 220 7 50 chr2 6561481 6561622 -246694961 + GA-rich Low_complexity Low_complexity 2 136 0 243 285 146 8 chr2 6562139 6562262 -246694321 + L2 LINE L2 3132 3271 -1 229 301 12 0 chr2 6562431 6562514 -246694069 + MIR SINE MIR 111 194 -68 748 247 57 10 chr2 6562552 6562746 -246693837 - MLT1B LTR MaLR 0 467 265 329 281 9 9 chr2 6562746 6562860 -246693723 - MIR SINE MIR -132 130 17 794 196 87 4 chr2 6562931 6563156 -246693427 - MLT1B LTR MaLR -186 204 9 625 289 21 4 chr2 6563193 6563428 -246693155 + MIR SINE MIR 20 258 -4 352 242 77 0 chr2 6565024 6565115 -246691468 + MER63 DNA MER1_type 1 724 -338 567 203 99 81 chr2 6565514 6565736 -246690847 + HAL1 LINE L1 1 226 -2281 818 170 12 12 chr2 6566219 6566469 -246690114 + GA-rich Low_complexity Low_complexity 1 250 0 357 24 0 0 chr2 6566471 6566513 -246690070 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 825 241 137 52 chr2 6566514 6566938 -246689645 - MLT1C LTR MaLR -4 463 4 237 259 12 25 chr2 6566941 6567022 -246689561 + GA-rich Low_complexity Low_complexity 3 82 0 1843 219 73 7 chr2 6567132 6567584 -246688999 + L1MB2 LINE L1 5686 6167 -4 406 83 0 17 chr2 6567886 6567946 -246688637 - L1PA13 LINE L1 -847 5458 5400 5025 90 1 13 chr2 6567946 6568644 -246687939 + L1PA13 LINE L1 5470 6161 -2 198 260 26 52 chr2 6569410 6569487 -246687096 - MIR3 SINE MIR -39 169 95 210 37 0 0 chr2 6569767 6569794 -246686789 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 209 270 126 50 chr2 6570513 6570672 -246685911 - MIR3 SINE MIR -22 186 16 226 304 194 42 chr2 6571175 6571366 -246685217 + MIR SINE MIR 30 249 -13 399 306 136 71 chr2 6571859 6572425 -246684158 + L1MC4a LINE L1 5265 5867 -1941 1868 81 20 6 chr2 6573100 6573490 -246683093 - MLT2A2 LTR ERVL 0 453 1 515 294 0 0 chr2 6574575 6574738 -246681845 + MIR SINE MIR 95 257 -5 219 333 28 28 chr2 6574760 6574868 -246681715 - MIR SINE MIR -64 144 37 483 332 62 7 chr2 6575177 6575451 -246681132 - L1ME LINE L1 -307 5814 5526 661 123 0 25 chr2 6575601 6575723 -246680860 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 199 274 32 0 chr2 6575761 6575823 -246680760 + MIR SINE MIR 159 222 -40 191 343 81 6 chr2 6576323 6576495 -246680088 + L2 LINE L2 2981 3165 -148 2025 130 33 20 chr2 6576598 6576899 -246679684 - AluSq SINE Alu -8 305 1 2586 71 21 0 chr2 6576974 6577312 -246679271 + L1P3 LINE L1 5361 5705 -467 219 319 8 50 chr2 6577313 6577432 -246679151 + L2 LINE L2 3180 3293 -20 327 301 64 13 chr2 6578523 6578679 -246677904 - MIR SINE MIR -62 200 37 450 83 0 42 chr2 6578747 6578819 -246677764 + MADE1 DNA Mariner 10 78 -2 346 252 48 29 chr2 6578821 6578924 -246677659 - L2 LINE L2 -36 3277 3173 196 320 39 39 chr2 6579232 6579410 -246677173 - L2 LINE L2 -578 2736 2559 295 233 63 47 chr2 6579709 6579795 -246676788 - MIR3 SINE MIR -53 155 68 28 0 0 0 chr2 6579863 6579891 -246676692 + AT_rich Low_complexity Low_complexity 1 28 0 299 333 9 0 chr2 6580753 6580858 -246675725 + MIR3 SINE MIR 67 172 -36 2195 112 0 3 chr2 6581375 6581670 -246674913 + AluSc SINE Alu 1 294 -15 2332 95 0 20 chr2 6582340 6582645 -246673938 + AluSg SINE Alu 1 299 -11 192 252 9 17 chr2 6582963 6583078 -246673505 + GA-rich Low_complexity Low_complexity 4 117 0 401 205 53 76 chr2 6583082 6583253 -246673330 + HAL1 LINE L1 1011 1177 -1330 819 284 192 15 chr2 6583285 6583743 -246672840 + L1ME1 LINE L1 36 574 -5822 1225 265 86 52 chr2 6583761 6584912 -246671671 + L1ME1 LINE L1 1091 6230 -5 337 159 63 0 chr2 6585565 6585628 -246670955 - MLT1A2 LTR MaLR 0 390 324 586 228 124 0 chr2 6585638 6585783 -246670800 + FRAM SINE Alu 4 166 0 562 250 6 6 chr2 6585783 6585963 -246670620 + GA-rich Low_complexity Low_complexity 1 180 0 519 227 4 9 chr2 6585986 6586134 -246670449 - MLT1A2 LTR MaLR -56 372 192 750 219 21 42 chr2 6586184 6586376 -246670207 - MLT1A2 LTR MaLR -186 188 1 392 269 85 28 chr2 6586472 6586737 -246669846 - L1ME LINE L1 -4685 1576 1107 1594 223 77 12 chr2 6586752 6587183 -246669400 - MLT1C LTR MaLR 0 467 1 2111 273 82 26 chr2 6587183 6588336 -246668247 - L1ME LINE L1 -4846 1234 14 568 309 73 25 chr2 6588987 6589379 -246667204 - MLT1J LTR MaLR -45 466 13 279 0 0 0 chr2 6589736 6589767 -246666816 + (CA)n Simple_repeat Simple_repeat 2 32 0 359 318 0 0 chr2 6589768 6589875 -246666708 - MER5B DNA MER1_type -71 107 1 1027 142 0 0 chr2 6590279 6590434 -246666149 - AluSx SINE Alu -1 311 157 585 111 0 0 chr2 6590434 6590515 -246666068 - AluSx SINE Alu -231 82 2 1962 146 7 0 chr2 6590547 6590850 -246665733 + AluJb SINE Alu 1 305 0 313 176 110 11 chr2 6590934 6591025 -246665558 - MLT1J LTR MaLR -38 473 374 32544 218 19 16 chr2 6591060 6599486 -246657097 - HUERS-P3 LTR ERV1 -224 8695 259 484 138 11 53 chr2 6599490 6599584 -246656999 - HUERS-P3 LTR ERV1 -6905 91 2 4856 136 44 3 chr2 6599602 6600361 -246656222 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6601406 6601449 -246655134 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6602860 6603022 -246653561 - MIR SINE MIR -2 260 92 529 318 23 9 chr2 6603194 6603411 -246653172 + MIR SINE MIR 5 224 -38 259 368 48 0 chr2 6603605 6603730 -246652853 + MIR SINE MIR 20 150 -112 186 302 83 0 chr2 6603846 6603942 -246652641 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6604505 6604568 -246652015 + AT_rich Low_complexity Low_complexity 1 63 0 2292 112 0 0 chr2 6605650 6605946 -246650637 - AluSx SINE Alu -16 296 1 2264 54 0 0 chr2 6606355 6606615 -246649968 + AluY SINE Alu 39 298 -13 233 226 10 98 chr2 6607489 6607591 -246648992 - MIR SINE MIR -59 203 111 1641 134 130 88 chr2 6607741 6607788 -246648795 + MSTA LTR MaLR 3 47 -381 583 88 0 0 chr2 6607788 6607868 -246648715 - MADE1 DNA Mariner 0 80 1 1641 134 130 88 chr2 6607868 6608229 -246648354 + MSTA LTR MaLR 47 428 0 185 297 20 68 chr2 6608388 6608536 -246648047 + L2 LINE L2 2560 2700 -614 804 290 30 32 chr2 6608670 6609241 -246647342 + L1ME3A LINE L1 5458 6157 -13 318 295 29 7 chr2 6609550 6609689 -246646894 - L1ME LINE L1 -351 5811 5670 1500 162 63 36 chr2 6610011 6610314 -246646269 - AluJo SINE Alu -1 311 1 2234 65 7 4 chr2 6610322 6610597 -246645986 - AluY SINE Alu -1 310 35 393 290 59 6 chr2 6610619 6610788 -246645795 + L2 LINE L2 2698 2875 -439 434 287 28 85 chr2 6610923 6611156 -246645427 + L2 LINE L2 3009 3254 -59 2131 140 79 15 chr2 6611156 6611498 -246645085 + THE1B LTR MaLR 1 364 0 11882 89 11 1 chr2 6611498 6613061 -246643522 + THE1B-int LTR MaLR 1 1579 -1 2245 117 73 15 chr2 6613064 6613406 -246643177 + THE1B LTR MaLR 3 364 0 434 287 28 85 chr2 6613406 6613484 -246643099 + L2 LINE L2 3255 3307 -6 248 212 91 30 chr2 6613529 6613628 -246642955 + MIR SINE MIR 60 164 -98 324 48 0 0 chr2 6613790 6613832 -246642751 + (CA)n Simple_repeat Simple_repeat 2 43 0 341 288 108 42 chr2 6614899 6615139 -246641444 - MIR SINE MIR 0 262 7 287 340 22 55 chr2 6615677 6615948 -246640635 + L2 LINE L2 2834 3095 -177 244 203 0 47 chr2 6615994 6616058 -246640525 + L2 LINE L2 3187 3247 -25 595 284 85 21 chr2 6616822 6617058 -246639525 - MIR SINE MIR -11 251 1 21 57 0 0 chr2 6618113 6618148 -246638435 + GC_rich Low_complexity Low_complexity 1 35 0 514 265 110 82 chr2 6619199 6619689 -246636894 + Tigger8 DNA MER2_type 63 566 -100 1784 203 12 50 chr2 6619866 6620270 -246636313 - MLT1B LTR MaLR 0 390 2 393 261 130 52 chr2 6620890 6621213 -246635370 + L1M3 LINE L1 3103 3444 -2702 615 314 51 46 chr2 6621650 6622042 -246634541 + MER68 LTR ERV1 156 549 -13 180 111 0 0 chr2 6622047 6622074 -246634509 + (CA)n Simple_repeat Simple_repeat 1 27 0 500 230 100 53 chr2 6622192 6622441 -246634142 + L1M3 LINE L1 5183 5440 -728 2545 188 46 0 chr2 6622469 6622922 -246633661 + MER101 LTR ERV1 1 474 0 1948 174 43 57 chr2 6624093 6624589 -246631994 + MER31-int LTR ERV1 815 3120 -3211 567 270 56 30 chr2 6624520 6624790 -246631793 + LTR57-int LTR ERVL 1234 1510 -3833 * 473 263 71 25 chr2 6624832 6625030 -246631553 + MER31-int LTR ERV1 1711 1917 -3019 1223 188 32 73 chr2 6625118 6625624 -246630959 + MER31-int LTR ERV1 2052 3835 -2428 901 143 20 51 chr2 6625768 6625964 -246630619 + MER31-int LTR ERV1 3541 3730 -2868 1288 201 98 81 chr2 6626044 6626624 -246629959 + MER31-int LTR ERV1 3287 3501 -1514 2732 150 11 23 chr2 6626624 6627057 -246629526 + MSTA LTR MaLR 1 428 0 1288 201 98 81 chr2 6627057 6627644 -246628939 + MER31-int LTR ERV1 3501 4077 -938 262 169 56 61 chr2 6627665 6627813 -246628770 + MER31-int LTR ERV1 5200 5397 -934 534 229 21 21 chr2 6627822 6627966 -246628617 + MER31-int LTR ERV1 4259 4402 -534 381 305 71 38 chr2 6629437 6629649 -246626934 - MIR SINE MIR -6 256 35 942 260 66 3 chr2 6631569 6631857 -246624726 - L1ME3A LINE L1 -2 6168 5863 204 310 150 0 chr2 6631889 6631989 -246624594 + L2 LINE L2 2541 2655 -659 204 315 14 27 chr2 6632435 6632508 -246624075 + L2 LINE L2 3201 3272 0 330 275 62 83 chr2 6632538 6632730 -246623853 + MIR SINE MIR 19 204 -58 30 45 0 0 chr2 6632745 6632789 -246623794 + AT_rich Low_complexity Low_complexity 1 44 0 4176 113 28 2 chr2 6632904 6633469 -246623114 - LTR19B LTR ERV1 0 580 1 53 0 0 0 chr2 6633498 6633551 -246623032 + AT_rich Low_complexity Low_complexity 1 53 0 267 224 24 88 chr2 6633966 6634091 -246622492 + MER94 DNA DNA 1 117 -17 331 331 63 0 chr2 6634131 6634273 -246622310 + MIR SINE MIR 46 196 -66 340 294 133 45 chr2 6634655 6634941 -246621642 + HAL1 LINE L1 593 903 -1604 1228 275 144 29 chr2 6634942 6635690 -246620893 + HAL1 LINE L1 928 1761 -746 253 141 109 43 chr2 6635782 6635874 -246620709 + LTR33A LTR ERVL 360 457 -66 231 316 59 59 chr2 6636551 6636687 -246619896 + MER5B DNA MER1_type 43 178 0 23 54 0 0 chr2 6637564 6637601 -246618982 + AT_rich Low_complexity Low_complexity 1 37 0 750 316 56 22 chr2 6637716 6638039 -246618544 - MER68 LTR ERV1 0 562 229 202 331 8 58 chr2 6640705 6640826 -246615757 - L2 LINE L2 -223 3049 2935 22 56 0 0 chr2 6643791 6643827 -246612756 + AT_rich Low_complexity Low_complexity 1 36 0 293 305 102 11 chr2 6643993 6644180 -246612403 + L1ME LINE L1 5518 5721 -400 2390 75 3 0 chr2 6644182 6644506 -246612077 + AluY SINE Alu 1 311 0 22 0 0 0 chr2 6645069 6645091 -246611492 + AT_rich Low_complexity Low_complexity 1 22 0 197 306 124 16 chr2 6645122 6645243 -246611340 - MIR SINE MIR -10 252 119 394 197 271 0 chr2 6645330 6645452 -246611131 - MER5A DNA MER1_type -7 182 28 1143 252 72 6 chr2 6645496 6645814 -246610769 + MER58B DNA MER1_type 2 340 -1 23 33 0 0 chr2 6646418 6646448 -246610135 + AT_rich Low_complexity Low_complexity 1 30 0 1387 188 90 10 chr2 6647155 6647443 -246609140 - AluJb SINE Alu -1 311 1 205 156 0 0 chr2 6648007 6648039 -246608544 + (CATG)n Simple_repeat Simple_repeat 3 34 0 2211 99 10 0 chr2 6650419 6650711 -246605872 + AluSg SINE Alu 6 300 -10 186 71 0 0 chr2 6650978 6651006 -246605577 + (CCA)n Simple_repeat Simple_repeat 2 29 0 206 196 18 18 chr2 6651466 6651522 -246605061 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 32593 109 7 59 chr2 6651522 6657206 -246599377 - L1PA7 LINE L1 -12 6142 843 2234 129 0 0 chr2 6657206 6657516 -246599067 - AluSg SINE Alu 0 310 1 32593 109 7 59 chr2 6657516 6658307 -246598276 - L1PA7 LINE L1 -5311 843 12 310 230 111 0 chr2 6658430 6658565 -246598018 - L1ME4a LINE L1 0 6121 5972 495 0 0 0 chr2 6658838 6658893 -246597690 + (CA)n Simple_repeat Simple_repeat 2 56 0 1300 234 101 3 chr2 6659242 6659579 -246597004 - MLT1A2 LTR MaLR -4 370 1 198 187 103 14 chr2 6660263 6660328 -246596255 + MIR SINE MIR 82 214 -48 235 433 55 16 chr2 6660598 6660725 -246595858 - L2 LINE L2 -18 3254 3123 2443 117 6 6 chr2 6660910 6661260 -246595323 + L1PB1 LINE L1 5801 6150 -1 281 328 41 16 chr2 6662268 6662390 -246594193 - MIR SINE MIR -34 228 104 297 0 0 0 chr2 6663049 6663082 -246593501 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 269 13 0 chr2 6663485 6663563 -246593020 - LTR16A LTR ERVL 0 450 372 298 210 25 25 chr2 6664266 6664347 -246592236 - MLT1J1 LTR MaLR -2 444 364 255 367 0 0 chr2 6664819 6664898 -246591685 + MIR3 SINE MIR 109 187 -21 252 313 111 0 chr2 6664970 6665069 -246591514 - L2 LINE L2 -1 3271 3162 2809 143 22 13 chr2 6665219 6665307 -246591276 - MLT1C LTR MaLR 0 467 381 2475 157 80 46 chr2 6665307 6665347 -246591236 - MLT2B2 LTR ERVL 0 515 478 415 32 16 16 chr2 6665347 6665409 -246591174 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 2475 157 80 46 chr2 6665409 6665866 -246590717 - MLT2B2 LTR ERVL -37 478 1 2809 143 22 13 chr2 6665866 6666226 -246590357 - MLT1C LTR MaLR -86 381 15 2529 110 42 14 chr2 6666452 6666806 -246589777 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 6667122 6667143 -246589440 + AT_rich Low_complexity Low_complexity 1 21 0 2405 83 6 3 chr2 6667218 6667530 -246589053 - AluSp SINE Alu 0 313 1 197 194 0 0 chr2 6667963 6667999 -246588584 - MIR SINE MIR -9 253 218 810 238 0 0 chr2 6668998 6669166 -246587417 - AluJb SINE Alu -14 298 131 412 271 142 7 chr2 6669167 6669322 -246587261 - MIR SINE MIR -69 193 18 34 84 0 0 chr2 6670005 6670088 -246586495 + GC_rich Low_complexity Low_complexity 1 83 0 22 70 0 0 chr2 6670195 6670238 -246586345 + GC_rich Low_complexity Low_complexity 1 43 0 2650 152 11 2 chr2 6670416 6670857 -246585726 - L1PB4 LINE L1 -318 5838 5394 367 23 0 0 chr2 6671162 6671205 -246585378 + (TTTA)n Simple_repeat Simple_repeat 2 176 0 1451 163 50 50 chr2 6671205 6671487 -246585096 - AluJo SINE Alu -28 284 3 201 319 87 0 chr2 6672638 6672707 -246583876 - MER91C DNA MER1_type -47 93 19 887 206 0 0 chr2 6672752 6672907 -246583676 + AluJb SINE Alu 127 281 -31 346 247 103 0 chr2 6673606 6673703 -246582880 - L2 LINE L2 -12 3260 3154 660 315 94 44 chr2 6674764 6675757 -246580826 - L2 LINE L2 -16 3297 2191 953 43 0 0 chr2 6675830 6675947 -246580636 + L1PA13 LINE L1 6041 6157 -6 1584 210 127 50 chr2 6676435 6676916 -246579667 + MLT2B1 LTR ERVL 1 518 -2 271 328 108 10 chr2 6679715 6679919 -246576664 + L1ME3A LINE L1 5567 5790 -2018 340 253 33 22 chr2 6680537 6680628 -246575955 - MIR SINE MIR -28 234 143 245 280 68 68 chr2 6680702 6680909 -246575674 + MLT1H LTR MaLR 130 336 -213 352 223 268 0 chr2 6680972 6681084 -246575499 - MIR SINE MIR -115 147 6 658 280 82 0 chr2 6681289 6681496 -246575087 + MER58A DNA MER1_type 1 224 0 335 115 0 0 chr2 6682020 6682072 -246574511 + MADE1 DNA Mariner 29 80 0 313 154 92 0 chr2 6682590 6682655 -246573928 + MER67A LTR ERV1 18 88 -455 1487 248 45 14 chr2 6682711 6683138 -246573445 + MER67A LTR ERV1 84 523 -20 257 303 50 10 chr2 6683251 6683350 -246573233 - MIR SINE MIR -59 203 101 357 390 39 18 chr2 6683779 6684061 -246572522 - L3 LINE CR1 -554 1023 736 530 289 70 18 chr2 6684791 6685133 -246571450 + L1M4 LINE L1 2201 2560 -3586 709 272 67 22 chr2 6685149 6685417 -246571166 + L1ME3A LINE L1 5859 6138 -32 630 316 201 5 chr2 6685606 6685980 -246570603 + L2 LINE L2 2867 3313 0 605 285 117 61 chr2 6687197 6687523 -246569060 + L2 LINE L2 2970 3313 0 26 0 0 0 chr2 6687613 6687639 -246568944 + AT_rich Low_complexity Low_complexity 1 26 0 266 280 75 19 chr2 6687712 6687819 -246568764 - MIR SINE MIR -142 120 8 420 37 0 0 chr2 6688493 6688547 -246568036 + (CA)n Simple_repeat Simple_repeat 2 55 0 370 368 0 0 chr2 6689541 6689666 -246566917 + MIR SINE MIR 22 146 -62 730 178 0 15 chr2 6689873 6690008 -246566575 + FLAM_C SINE Alu 1 133 0 528 156 33 25 chr2 6690013 6690135 -246566448 - MER53 DNA DNA -12 177 55 183 278 130 99 chr2 6691074 6691236 -246565347 + L3b LINE CR1 1337 1503 -80 234 364 78 31 chr2 6691282 6691411 -246565172 + MIR3 SINE MIR 11 145 -63 358 318 94 15 chr2 6691576 6691777 -246564806 + L3 LINE CR1 1361 1577 0 186 103 0 0 chr2 6691826 6691855 -246564728 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 299 257 59 65 chr2 6692090 6692281 -246564302 + MIR SINE MIR 5 196 -65 183 80 0 0 chr2 6693915 6693940 -246562643 + (GA)n Simple_repeat Simple_repeat 2 26 0 180 344 0 0 chr2 6694125 6694189 -246562394 - MIR SINE MIR -129 133 70 653 169 92 23 chr2 6694192 6694322 -246562261 - MSTA LTR MaLR -234 141 3 407 349 31 15 chr2 6694335 6694662 -246561921 + L1M4 LINE L1 3826 4157 -1989 22 0 0 0 chr2 6694728 6694750 -246561833 + AT_rich Low_complexity Low_complexity 1 22 0 250 275 12 12 chr2 6694782 6694862 -246561721 - LTR33A LTR ERVL 0 523 444 655 286 43 22 chr2 6694866 6695142 -246561441 - MLT1C LTR MaLR 0 467 186 775 279 8 8 chr2 6695267 6695521 -246561062 - MLT1C LTR MaLR -213 254 1 25 0 0 0 chr2 6695922 6695947 -246560636 + AT_rich Low_complexity Low_complexity 1 25 0 320 329 32 4 chr2 6696096 6696342 -246560241 + L1ME3A LINE L1 5695 5947 -223 456 305 99 15 chr2 6698019 6698281 -246558302 - LTR16A LTR ERVL -14 436 153 952 285 119 34 chr2 6698307 6699023 -246557560 + HAL1 LINE L1 979 1755 -752 1784 162 72 57 chr2 6699095 6699514 -246557069 - MSTB1 LTR MaLR -5 427 3 343 262 38 93 chr2 6699603 6699893 -246556690 + HAL1 LINE L1 1936 2209 -298 884 185 101 63 chr2 6700215 6700631 -246555952 + MLT1D LTR MaLR 22 505 0 286 228 114 74 chr2 6700982 6701131 -246555452 + MIR SINE MIR 19 173 -89 1816 166 3 0 chr2 6701677 6701960 -246554623 - AluJb SINE Alu -23 289 6 481 285 15 0 chr2 6702157 6702294 -246554289 + L3 LINE CR1 1201 1339 -238 300 328 25 25 chr2 6702685 6702807 -246553776 - MER5A DNA MER1_type -12 177 56 216 200 0 0 chr2 6703057 6703107 -246553476 + (TG)n Simple_repeat Simple_repeat 2 51 0 1531 264 27 2 chr2 6703107 6703632 -246552951 + L1MCa LINE L1 2371 2910 -3516 435 169 34 59 chr2 6703807 6703925 -246552658 - LTR67 LTR ERVL 0 557 443 2477 46 0 0 chr2 6705453 6705759 -246550824 - L1PA2 LINE L1 -7 6148 5843 319 87 0 0 chr2 6706146 6706192 -246550391 + MADE1 DNA Mariner 5 50 -30 921 160 30 5 chr2 6706200 6706835 -246549748 + (TCTA)n Simple_repeat Simple_repeat 1 651 0 402 21 0 0 chr2 6706856 6706903 -246549680 + (TG)n Simple_repeat Simple_repeat 2 48 0 275 338 163 0 chr2 6707457 6707617 -246548966 + MIR SINE MIR 77 262 0 21 36 0 0 chr2 6707901 6707929 -246548654 + AT_rich Low_complexity Low_complexity 1 28 0 335 312 22 14 chr2 6708050 6708188 -246548395 + MLT1J2 LTR MaLR 46 184 -266 967 247 54 30 chr2 6709267 6709672 -246546911 - L1M4 LINE L1 -2452 4192 3778 1146 237 28 59 chr2 6709688 6710043 -246546540 + MLT1A1 LTR MaLR 1 344 -21 614 244 0 0 chr2 6710041 6710160 -246546423 - MLT1A1 LTR MaLR -246 119 1 * 1086 242 93 8 chr2 6710229 6710444 -246546139 - L1M4 LINE L1 -2884 3760 3565 273 57 0 0 chr2 6710444 6710479 -246546104 + (TG)n Simple_repeat Simple_repeat 2 36 0 1086 242 93 8 chr2 6710479 6710767 -246545816 - L1M4 LINE L1 -3079 3565 3214 297 227 78 50 chr2 6710783 6710924 -246545659 - L1M4 LINE L1 -6381 161 17 189 74 0 0 chr2 6711837 6711864 -246544719 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 1025 213 115 20 chr2 6712186 6712439 -246544144 + AluJo SINE Alu 1 277 -35 1965 138 7 3 chr2 6712457 6712748 -246543835 + AluSx SINE Alu 1 292 -20 36 40 0 0 chr2 6712748 6712798 -246543785 + AT_rich Low_complexity Low_complexity 1 50 0 222 311 27 14 chr2 6713947 6714021 -246542562 - MIR SINE MIR -150 112 38 731 160 33 0 chr2 6714148 6714298 -246542285 + BC200 scRNA scRNA 1 155 -45 180 239 68 45 chr2 6715573 6715661 -246540922 - MIR SINE MIR -103 105 16 27 73 0 0 chr2 6715751 6715806 -246540777 + AT_rich Low_complexity Low_complexity 1 55 0 278 325 71 26 chr2 6717343 6717497 -246539086 + L2 LINE L2 2914 3074 -198 1101 30 8 8 chr2 6719155 6719286 -246537297 - AluY SINE Alu -180 131 1 286 326 56 41 chr2 6720256 6720452 -246536131 + MIR SINE MIR 35 233 -29 381 350 64 6 chr2 6720481 6720638 -246535945 - MIR SINE MIR -77 185 20 471 285 158 13 chr2 6720645 6720803 -246535780 - MER5A DNA MER1_type 0 189 9 223 93 0 74 chr2 6720899 6720953 -246535630 + (GGAGAA)n Simple_repeat Simple_repeat 2 51 0 227 315 56 11 chr2 6721324 6721413 -246535170 + MIR SINE MIR 118 210 -52 2004 205 117 16 chr2 6721413 6721916 -246534667 - MLT2B3 LTR ERVL 0 554 1 650 264 40 40 chr2 6722038 6722278 -246534305 - MIR SINE MIR -11 251 16 1781 133 96 37 chr2 6722861 6723215 -246533368 - THE1C LTR MaLR 0 375 1 1573 187 45 18 chr2 6723330 6723694 -246532889 + MLT1A1 LTR MaLR 3 467 0 232 241 24 60 chr2 6724680 6724763 -246531820 - MIR3 SINE MIR -11 197 118 260 250 80 10 chr2 6724813 6724913 -246531670 + MIR SINE MIR 81 187 -75 238 313 9 54 chr2 6724902 6725014 -246531569 + L2 LINE L2 3207 3313 0 * 205 306 106 12 chr2 6725070 6725155 -246531428 - MIR3 SINE MIR -102 106 14 334 253 42 0 chr2 6726259 6726354 -246530229 + MER94 DNA DNA 21 119 -15 281 153 0 56 chr2 6726641 6726713 -246529870 + L1PA16 LINE L1 6095 6162 -4 207 0 0 0 chr2 6727032 6727055 -246529528 + (TG)n Simple_repeat Simple_repeat 1 23 0 1788 146 19 45 chr2 6727356 6727733 -246528850 - THE1C LTR MaLR -8 367 1 1183 212 50 32 chr2 6727750 6728127 -246528456 + L1MC4 LINE L1 7044 7427 -615 696 215 10 40 chr2 6728121 6728321 -246528262 - L1MC4 LINE L1 -961 7081 6888 * 292 276 48 0 chr2 6728439 6728544 -246528039 - MIR3 SINE MIR -9 199 90 252 86 0 0 chr2 6729345 6729380 -246527203 + (T)n Simple_repeat Simple_repeat 1 35 0 2301 103 0 0 chr2 6730198 6730499 -246526084 + AluY SINE Alu 1 301 -10 2782 96 8 0 chr2 6730631 6731027 -246525556 - MLT2A2 LTR ERVL -53 400 2 224 318 95 84 chr2 6731590 6731769 -246524814 - L2 LINE L2 -36 3236 3056 370 323 40 56 chr2 6731992 6732254 -246524329 + MIR SINE MIR 9 261 -1 41 58 0 0 chr2 6732342 6732411 -246524172 + AT_rich Low_complexity Low_complexity 1 69 0 219 339 64 53 chr2 6733096 6733261 -246523322 - MIR SINE MIR -75 133 8 242 231 0 0 chr2 6733326 6733378 -246523205 + L2 LINE L2 3262 3313 0 373 118 0 24 chr2 6734615 6734700 -246521883 + (TA)n Simple_repeat Simple_repeat 2 84 0 401 0 20 0 chr2 6735238 6735287 -246521296 + (TG)n Simple_repeat Simple_repeat 2 51 0 215 260 80 30 chr2 6735725 6735825 -246520758 + MIR3 SINE MIR 93 197 -11 * 241 231 215 31 chr2 6735821 6735951 -246520632 - MIR SINE MIR -4 258 105 189 0 0 0 chr2 6736869 6736890 -246519693 + (TAA)n Simple_repeat Simple_repeat 2 22 0 28 0 0 0 chr2 6737515 6737543 -246519040 + AT_rich Low_complexity Low_complexity 1 28 0 798 245 20 0 chr2 6737569 6737765 -246518818 + L1ME1 LINE L1 5480 5679 -487 1099 153 0 10 chr2 6737769 6737971 -246518612 + L1PBa LINE L1 1 200 -6663 * 2496 129 35 18 chr2 6737945 6738454 -246518129 + L1PBa LINE L1 599 1159 -5704 9544 97 62 6 chr2 6738456 6740052 -246516531 + L1PBa LINE L1 1311 2996 -3866 812 212 16 11 chr2 6740052 6740241 -246516342 - LTR1 LTR ERV1 -593 192 3 13374 175 45 54 chr2 6740243 6743358 -246513225 - HUERS-P2 LTR ERV1 0 3088 2 2313 197 108 65 chr2 6743359 6744150 -246512433 - LTR1B LTR ERV1 0 826 2 5172 175 25 9 chr2 6744151 6745786 -246510797 + L1PB1 LINE L1 4132 5791 -360 207 143 57 29 chr2 6745801 6745906 -246510677 + (TA)n Simple_repeat Simple_repeat 1 108 0 434 45 45 30 chr2 6745944 6745998 -246510585 - L1PB1 LINE L1 -302 5849 5792 207 0 0 0 chr2 6745998 6746021 -246510562 + (TG)n Simple_repeat Simple_repeat 1 23 0 434 45 45 30 chr2 6746021 6746033 -246510550 - L1PB1 LINE L1 -359 5792 5782 455 127 70 14 chr2 6746050 6746315 -246510268 + (TA)n Simple_repeat Simple_repeat 1 250 -425 2713 63 11 8 chr2 6746315 6746679 -246509904 + L1PB1 LINE L1 5782 6146 -5 455 127 70 14 chr2 6746679 6746690 -246509893 + (TA)n Simple_repeat Simple_repeat 250 675 0 1159 249 95 19 chr2 6746696 6747169 -246509414 + L1ME1 LINE L1 5654 6162 -4 902 122 23 0 chr2 6747189 6747320 -246509263 + AluSx SINE Alu 1 134 -178 402 151 0 0 chr2 6747320 6747393 -246509190 + (TA)n Simple_repeat Simple_repeat 2 74 0 1093 141 0 40 chr2 6747396 6747573 -246509010 + AluSx SINE Alu 127 296 -16 249 33 0 0 chr2 6748258 6748288 -246508295 + (CA)n Simple_repeat Simple_repeat 1 30 0 215 288 38 0 chr2 6748590 6748670 -246507913 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 296 291 50 64 chr2 6749316 6749457 -246507126 + L2 LINE L2 3134 3272 0 386 298 33 33 chr2 6750205 6750326 -246506257 - L2 LINE L2 -9 3304 3184 910 289 43 10 chr2 6750623 6750924 -246505659 + L2 LINE L2 1911 2221 -1093 313 306 20 14 chr2 6750943 6751090 -246505493 + L1MEc LINE L1 67 214 -6182 527 291 50 48 chr2 6751601 6751797 -246504786 + L1MEc LINE L1 658 852 -5353 2124 123 10 3 chr2 6751797 6752098 -246504485 + AluSq SINE Alu 1 303 -10 527 291 50 48 chr2 6752098 6752506 -246504077 + L1MEc LINE L1 852 1220 -4985 3364 138 57 7 chr2 6752543 6753158 -246503425 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 504 152 235 38 chr2 6753155 6753287 -246503296 - Tigger4(Zombi) DNA MER2_type -2571 160 3 * 213 167 21 21 chr2 6753287 6753335 -246503248 + (CA)n Simple_repeat Simple_repeat 1 48 0 666 278 91 53 chr2 6753438 6753579 -246503004 + L1MEc LINE L1 1506 1640 -4756 832 207 5 0 chr2 6753579 6753767 -246502816 + L1MD1 LINE L1 6054 6242 0 666 278 91 53 chr2 6753767 6753951 -246502632 + L1MEc LINE L1 1640 1815 -4581 2133 142 0 0 chr2 6753951 6754260 -246502323 + AluSx SINE Alu 1 309 -3 666 278 91 53 chr2 6754260 6754713 -246501870 + L1MEc LINE L1 1815 2315 -4081 3891 239 84 18 chr2 6754758 6755815 -246500768 + L1M4b LINE L1 227 1353 -5506 2232 108 0 0 chr2 6755819 6756107 -246500476 + AluSc SINE Alu 1 288 -21 213 241 0 0 chr2 6756109 6756163 -246500420 + (TA)n Simple_repeat Simple_repeat 1 54 0 291 117 83 0 chr2 6756164 6756224 -246500359 + L1M4b LINE L1 1357 1421 -5438 321 159 0 0 chr2 6756424 6756487 -246500096 + (TG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr2 6757362 6757390 -246499193 + AT_rich Low_complexity Low_complexity 1 28 0 197 377 85 31 chr2 6757574 6757704 -246498879 - MIR3 SINE MIR -6 202 66 3041 285 105 23 chr2 6758739 6758858 -246497725 + L1MB7 LINE L1 6 114 -6845 1868 148 65 0 chr2 6758858 6759149 -246497434 - AluSx SINE Alu -2 310 1 3041 285 105 23 chr2 6759149 6761250 -246495333 + L1MB7 LINE L1 114 2405 -4554 206 260 0 0 chr2 6761318 6761368 -246495215 + (TA)n Simple_repeat Simple_repeat 2 51 0 355 325 0 0 chr2 6761434 6761548 -246495035 - L1M4b LINE L1 -5344 1515 1402 2239 244 89 36 chr2 6761652 6762172 -246494411 + L1MB7 LINE L1 2560 3051 -3906 352 81 16 16 chr2 6762172 6762234 -246494349 + (TA)n Simple_repeat Simple_repeat 1 62 0 2239 244 89 36 chr2 6762234 6763133 -246493450 + L1MB7 LINE L1 3051 3999 -2958 1157 181 43 27 chr2 6763140 6763439 -246493144 + L1MA7 LINE L1 5988 6291 0 5193 229 77 26 chr2 6763468 6764843 -246491740 + L1MB7 LINE L1 4016 5319 -1676 234 0 0 0 chr2 6764843 6764869 -246491714 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 240 100 0 0 chr2 6764868 6764908 -246491675 + (CA)n Simple_repeat Simple_repeat 1 40 0 5193 229 77 26 chr2 6764869 6766245 -246490338 + L1MB7 LINE L1 5319 6868 -127 3696 60 9 0 chr2 6766245 6766709 -246489874 - L1PA8 LINE L1 -4 6168 5701 358 196 0 0 chr2 6766709 6766801 -246489782 + L1MB8 LINE L1 6072 6163 -15 2091 155 63 24 chr2 6767047 6767460 -246489123 + MSTB1 LTR MaLR 4 432 0 24 0 0 0 chr2 6767902 6767926 -246488657 + AT_rich Low_complexity Low_complexity 1 24 0 198 314 65 46 chr2 6768275 6768428 -246488155 + MIR SINE MIR 81 236 -26 289 297 203 16 chr2 6768848 6769154 -246487429 - MLT1J1 LTR MaLR -24 422 60 207 0 0 0 chr2 6769412 6769435 -246487148 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 6771028 6771052 -246485531 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 252 0 0 0 chr2 6771051 6771079 -246485504 + (CA)n Simple_repeat Simple_repeat 1 28 0 195 42 0 0 chr2 6771078 6771102 -246485481 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 23 0 0 0 chr2 6771684 6771707 -246484876 + AT_rich Low_complexity Low_complexity 1 23 0 2482 115 24 21 chr2 6772552 6772926 -246483657 + THE1C LTR MaLR 1 375 0 221 213 0 0 chr2 6775436 6775483 -246481100 + MER5B DNA MER1_type 130 176 -2 418 167 119 0 chr2 6775715 6775799 -246480784 + MER5A DNA MER1_type 13 106 -83 330 336 27 0 chr2 6775862 6775972 -246480611 + MER5B DNA MER1_type 1 113 -65 270 323 56 19 chr2 6778828 6778989 -246477594 + MIR SINE MIR 84 250 -12 * 756 318 25 8 chr2 6778933 6779178 -246477405 - MIR SINE MIR -6 256 8 1427 213 23 0 chr2 6779623 6779928 -246476655 - AluJo SINE Alu 0 312 1 248 367 92 0 chr2 6782026 6782135 -246474448 - L2 LINE L2 -1 3271 3153 507 305 46 6 chr2 6782774 6782948 -246473635 - MIR SINE MIR -16 246 66 290 237 237 5 chr2 6783395 6783614 -246472969 + LTR50 LTR ERVL 8 277 -518 436 243 221 30 chr2 6783668 6783931 -246472652 + LTR33A LTR ERVL 328 519 -4 1368 155 91 16 chr2 6784265 6784517 -246472066 - AluJb SINE Alu -16 296 26 349 278 0 0 chr2 6785156 6785228 -246471355 - MIR SINE MIR -92 116 45 752 258 42 24 chr2 6785321 6785383 -246471200 - MER58A DNA MER1_type -2203 217 158 2540 122 53 26 chr2 6785383 6785800 -246470783 - MSTA LTR MaLR 0 428 1 752 258 42 24 chr2 6785800 6785950 -246470633 - MER58A DNA MER1_type -2262 158 1 559 326 80 37 chr2 6785987 6786389 -246470194 - MLT1J LTR MaLR -57 454 36 191 111 0 0 chr2 6786649 6786676 -246469907 + MIR SINE MIR 118 144 -118 958 188 17 59 chr2 6788362 6788601 -246467982 + MSTB2 LTR MaLR 229 457 0 1243 197 55 108 chr2 6788647 6789028 -246467555 + MLT1A1 LTR MaLR 1 361 -4 244 361 56 13 chr2 6789739 6789879 -246466704 + MIR SINE MIR 16 155 -53 21 36 0 0 chr2 6790073 6790101 -246466482 + AT_rich Low_complexity Low_complexity 1 28 0 336 48 0 0 chr2 6790248 6790290 -246466293 + (GA)n Simple_repeat Simple_repeat 1 42 0 195 69 0 0 chr2 6793831 6793860 -246462723 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 198 316 93 14 chr2 6793987 6794126 -246462457 + L2 LINE L2 2672 2821 -493 31 44 0 0 chr2 6794803 6794848 -246461735 + AT_rich Low_complexity Low_complexity 1 45 0 434 303 35 40 chr2 6795465 6795599 -246460984 - L1ME LINE L1 -404 5717 5583 2130 189 18 10 chr2 6795599 6795986 -246460597 + MLT1B LTR MaLR 1 390 0 434 303 35 40 chr2 6795986 6796049 -246460534 - L1ME LINE L1 -538 5583 5521 1976 162 40 30 chr2 6796854 6797225 -246459358 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 6797257 6797292 -246459291 + AT_rich Low_complexity Low_complexity 1 35 0 200 382 35 18 chr2 6797475 6797645 -246458938 + L2 LINE L2 2828 3000 -272 22 35 0 0 chr2 6797930 6797959 -246458624 + AT_rich Low_complexity Low_complexity 1 29 0 1820 226 11 6 chr2 6798025 6798388 -246458195 + MLT1A1 LTR MaLR 1 365 0 258 294 16 16 chr2 6798780 6798906 -246457677 + (TA)n Simple_repeat Simple_repeat 2 127 0 290 277 47 84 chr2 6799908 6800121 -246456462 + MIR SINE MIR 8 212 -50 1757 165 92 9 chr2 6800240 6800556 -246456027 + MER2 DNA MER2_type 2 343 -1 26 0 0 0 chr2 6801107 6801133 -246455450 + AT_rich Low_complexity Low_complexity 1 26 0 243 269 222 9 chr2 6801274 6801382 -246455201 + MIR SINE MIR 48 178 -84 4799 131 1 16 chr2 6801418 6802146 -246454437 - L1PA13 LINE L1 0 6163 5447 231 313 100 96 chr2 6802365 6802667 -246453916 - L2 LINE L2 -9 3304 2998 912 230 0 0 chr2 6802667 6802828 -246453755 + FRAM SINE Alu 1 161 -5 231 313 100 96 chr2 6802828 6803005 -246453578 - L2 LINE L2 -315 2998 2823 189 403 32 13 chr2 6803045 6803199 -246453384 - L2 LINE L2 -602 2712 2556 2137 130 0 3 chr2 6803804 6804112 -246452471 + AluSx SINE Alu 6 312 0 21 57 0 0 chr2 6804908 6804943 -246451640 + AT_rich Low_complexity Low_complexity 1 35 0 316 240 34 6 chr2 6805000 6805175 -246451408 + A-rich Low_complexity Low_complexity 1 180 0 4993 177 25 6 chr2 6805419 6806311 -246450272 + MER49 LTR ERV1 8 916 -7 213 65 0 0 chr2 6806895 6806926 -246449657 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 353 162 0 14 chr2 6807496 6807570 -246449013 + GA-rich Low_complexity Low_complexity 4 76 0 398 255 10 10 chr2 6807803 6807901 -246448682 - MIR SINE MIR -118 144 47 242 281 88 44 chr2 6808525 6808639 -246447944 - MIR SINE MIR -74 188 70 21 0 0 0 chr2 6809121 6809142 -246447441 + AT_rich Low_complexity Low_complexity 1 21 0 1196 182 0 85 chr2 6809185 6809443 -246447140 + AluJo SINE Alu 1 236 -76 1924 153 22 26 chr2 6810135 6810489 -246446094 + MLT2A2 LTR ERVL 3 309 -144 1169 133 0 6 chr2 6810579 6810760 -246445823 + MLT2A2 LTR ERVL 274 453 0 2392 50 0 3 chr2 6811747 6812053 -246444530 + AluY SINE Alu 1 305 0 416 322 94 59 chr2 6812307 6812763 -246443820 - MLT1K LTR MaLR 0 588 117 2253 96 0 3 chr2 6814237 6814530 -246442053 - AluY SINE Alu -19 292 1 2019 67 8 4 chr2 6815167 6815420 -246441163 - L1PA7 LINE L1 0 6154 5901 292 264 33 0 chr2 6815442 6815533 -246441050 - MER5A DNA MER1_type -95 94 1 246 62 0 0 chr2 6815680 6815712 -246440871 + (A)n Simple_repeat Simple_repeat 1 32 0 365 200 109 0 chr2 6816893 6817003 -246439580 - MER20 DNA MER1_type -95 124 3 1364 132 80 0 chr2 6817009 6817222 -246439361 + MER30 DNA MER1_type 1 230 0 216 194 45 0 chr2 6817315 6817449 -246439134 + (TG)n Simple_repeat Simple_repeat 2 141 0 218 191 23 30 chr2 6817536 6817667 -246438916 + (TG)n Simple_repeat Simple_repeat 2 131 0 541 150 22 28 chr2 6817678 6817858 -246438725 + (TG)n Simple_repeat Simple_repeat 1 179 0 431 204 39 6 chr2 6817880 6818197 -246438386 + (TG)n Simple_repeat Simple_repeat 1 327 0 188 339 73 24 chr2 6819051 6819102 -246437481 + MIR SINE MIR 101 148 -114 234 62 0 0 chr2 6819102 6819134 -246437449 + (TAA)n Simple_repeat Simple_repeat 1 32 0 188 339 73 24 chr2 6819134 6819206 -246437377 + MIR SINE MIR 148 230 -32 201 156 0 0 chr2 6820639 6820671 -246435912 + CT-rich Low_complexity Low_complexity 2 33 0 33 0 0 0 chr2 6821110 6821143 -246435440 + AT_rich Low_complexity Low_complexity 1 33 0 499 281 31 40 chr2 6823240 6823485 -246433098 - MIR SINE MIR -15 247 4 2255 101 3 0 chr2 6823727 6824014 -246432569 + AluSc SINE Alu 1 288 -21 25 51 0 0 chr2 6824827 6824866 -246431717 + AT_rich Low_complexity Low_complexity 1 39 0 1958 133 3 7 chr2 6824916 6825201 -246431382 + MER1B DNA MER1_type 43 326 -13 3617 255 115 52 chr2 6825252 6827351 -246429232 - Charlie7 DNA MER1_type -139 2473 243 1845 185 25 33 chr2 6827705 6828072 -246428511 - MLT1A1 LTR MaLR 0 365 2 263 361 31 0 chr2 6828581 6828711 -246427872 - MIR SINE MIR -50 212 79 229 320 82 0 chr2 6829327 6829449 -246427134 + MIR SINE MIR 76 207 -55 183 190 40 20 chr2 6830083 6830183 -246426400 + (CA)n Simple_repeat Simple_repeat 1 102 0 386 218 45 0 chr2 6830203 6830359 -246426224 + (CA)n Simple_repeat Simple_repeat 1 163 0 2129 195 20 66 chr2 6832856 6832906 -246423677 - MLT2B1 LTR ERVL -2 518 467 2424 123 22 6 chr2 6832906 6833264 -246423319 + THE1B LTR MaLR 1 364 0 2129 195 20 66 chr2 6833264 6833280 -246423303 - MLT2B1 LTR ERVL -53 467 452 512 43 29 0 chr2 6833280 6833350 -246423233 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 2129 195 20 66 chr2 6833350 6833825 -246422758 - MLT2B1 LTR ERVL -68 452 1 2313 161 67 7 chr2 6834079 6834483 -246422100 + MSTA LTR MaLR 1 428 0 2040 179 82 131 chr2 6835200 6835961 -246420622 + LTR8A LTR ERV1 1 723 -4 1132 215 99 52 chr2 6836016 6836600 -246419983 + LTR48B LTR ERV1 1 644 0 448 270 68 0 chr2 6836633 6836781 -246419802 - MIR SINE MIR -101 161 4 24 0 0 0 chr2 6836928 6836952 -246419631 + AT_rich Low_complexity Low_complexity 1 24 0 1768 154 89 17 chr2 6837093 6837443 -246419140 + THE1C LTR MaLR 1 375 0 257 254 167 7 chr2 6838832 6838970 -246417613 + MIR SINE MIR 100 259 -3 300 296 57 0 chr2 6838994 6839082 -246417501 + MIR SINE MIR 91 183 -79 1789 162 6 34 chr2 6839128 6839449 -246417134 + AluJb SINE Alu 1 312 0 1493 127 18 9 chr2 6839449 6839825 -246416758 + AluSc SINE Alu 81 461 0 253 318 76 23 chr2 6841727 6841859 -246414724 + MIR SINE MIR 5 143 -119 410 264 47 27 chr2 6843036 6843184 -246413399 - MIR SINE MIR -47 215 65 257 217 87 0 chr2 6843238 6843307 -246413276 - MIR SINE MIR -70 192 118 231 291 13 0 chr2 6843465 6843544 -246413039 - MIR3 SINE MIR -5 203 124 653 224 22 49 chr2 6843660 6843843 -246412740 + MER58C DNA MER1_type 38 215 0 30 0 0 0 chr2 6843904 6843934 -246412649 + AT_rich Low_complexity Low_complexity 1 30 0 225 353 17 8 chr2 6843957 6844076 -246412507 + MER5B DNA MER1_type 54 173 -5 369 277 13 43 chr2 6847095 6847180 -246409403 + L1ME LINE L1 5510 5565 -556 1916 145 35 0 chr2 6847180 6847469 -246409114 - AluSx SINE Alu -13 299 1 369 277 13 43 chr2 6847469 6847540 -246409043 + L1ME LINE L1 5565 5637 -484 2289 217 39 41 chr2 6847569 6848229 -246408354 + L1M4c LINE L1 1238 1896 -4488 1547 103 0 0 chr2 6848235 6848429 -246408154 + AluSq SINE Alu 1 194 -119 2099 100 3 17 chr2 6848980 6849269 -246407314 - AluSg SINE Alu -23 287 3 1233 154 43 39 chr2 6849335 6849569 -246407014 - AluJo SINE Alu -23 289 55 306 0 0 0 chr2 6850290 6850324 -246406259 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 564 242 62 36 chr2 6851568 6851762 -246404821 + MIR SINE MIR 63 261 -1 332 333 39 6 chr2 6852850 6853030 -246403553 + MERVL LTR ERVL 2314 2499 -2986 1658 140 89 24 chr2 6853057 6853350 -246403233 + AluSx SINE Alu 1 312 0 1587 204 18 15 chr2 6853758 6854101 -246402482 + Tigger1 DNA MER2_type 1 344 -2074 416 333 75 5 chr2 6855111 6855324 -246401259 - MIR SINE MIR -25 237 10 225 0 0 0 chr2 6855809 6855834 -246400749 + (T)n Simple_repeat Simple_repeat 1 25 0 2295 134 35 13 chr2 6856124 6856519 -246400064 - Tigger1 DNA MER2_type 0 2418 2015 264 185 92 0 chr2 6856493 6856557 -246400026 - Tigger1 DNA MER2_type -1934 484 415 2237 107 12 9 chr2 6856557 6856885 -246399698 + THE1A LTR MaLR 1 329 -26 410 100 0 133 chr2 6856985 6857075 -246399508 + AluSg/x SINE Alu 216 293 -17 381 197 174 76 chr2 6858175 6858307 -246398276 - MER5A DNA MER1_type -32 157 13 193 314 128 0 chr2 6858646 6858732 -246397851 - MIR SINE MIR -64 144 48 22 0 0 0 chr2 6859536 6859558 -246397025 + AT_rich Low_complexity Low_complexity 1 22 0 2690 34 0 0 chr2 6859596 6859892 -246396691 - AluY SINE Alu -15 296 1 3305 145 41 38 chr2 6860490 6861003 -246395580 - L1MB2 LINE L1 -270 5901 5384 2367 99 3 0 chr2 6861003 6861305 -246395278 - AluSg SINE Alu -7 303 1 3305 145 41 38 chr2 6861305 6861431 -246395152 - L1MB2 LINE L1 -787 5384 5260 780 172 90 0 chr2 6861431 6861576 -246395007 - AluJb SINE Alu -9 303 146 1670 158 0 28 chr2 6861583 6861868 -246394715 - AluJb SINE Alu -23 289 13 910 239 18 5 chr2 6861872 6862094 -246394489 - L1MB2 LINE L1 -871 5275 5051 730 285 6 6 chr2 6862677 6862856 -246393727 - LTR28 LTR ERV1 -841 179 1 2401 241 41 58 chr2 6862903 6863038 -246393545 + L1M1 LINE L1 17 153 -7412 2542 36 3 10 chr2 6863038 6863345 -246393238 - AluYa5 SINE Alu -6 305 1 2401 241 41 58 chr2 6863345 6863945 -246392638 + L1M1 LINE L1 153 739 -6826 2522 227 39 9 chr2 6864059 6864701 -246391882 + L1MB5 LINE L1 5513 6173 -1 314 28 0 0 chr2 6865100 6865136 -246391447 + (TG)n Simple_repeat Simple_repeat 2 37 0 554 316 81 61 chr2 6866002 6866395 -246390188 + L3 LINE CR1 1079 1479 -98 1281 147 44 5 chr2 6867468 6867672 -246388911 + AluJb SINE Alu 1 212 -100 2249 112 3 0 chr2 6867672 6867968 -246388615 - AluSx SINE Alu -15 297 1 2118 125 3 3 chr2 6868587 6868884 -246387699 - AluSx SINE Alu -15 297 1 1262 204 91 18 chr2 6869527 6869802 -246386781 - AluJb SINE Alu -17 295 1 2131 86 47 0 chr2 6869941 6870219 -246386364 - AluSq SINE Alu -22 291 1 24 0 0 0 chr2 6870648 6870672 -246385911 + AT_rich Low_complexity Low_complexity 1 24 0 5543 60 7 3 chr2 6871097 6871816 -246384767 - L1PA4 LINE L1 -180 5975 5254 5252 71 4 3 chr2 6871823 6872523 -246384060 + L1P LINE L1 3888 4588 -1558 2160 96 20 20 chr2 6872860 6873161 -246383422 + AluSc SINE Alu 1 301 -8 1090 165 0 0 chr2 6873162 6873332 -246383251 + AluSg/x SINE Alu 133 302 -8 245 230 203 0 chr2 6873812 6873886 -246382697 + MLT1I LTR MaLR 223 311 -244 1460 68 16 5 chr2 6874035 6874226 -246382357 + AluY SINE Alu 103 295 -16 1547 180 34 24 chr2 6874852 6875147 -246381436 + AluJo SINE Alu 1 298 -14 897 265 32 13 chr2 6875150 6875459 -246381124 + L1M4 LINE L1 2209 2523 -3623 357 337 32 16 chr2 6875794 6875981 -246380602 - MLT1D-int LTR MaLR -490 881 692 2380 240 18 44 chr2 6876098 6876777 -246379806 - MLT1D-int LTR MaLR -710 661 1 1100 204 134 41 chr2 6876779 6877111 -246379472 - MLT1D LTR MaLR -2 503 150 1305 181 31 14 chr2 6877145 6877438 -246379145 - AluSx SINE Alu -9 303 6 505 103 0 51 chr2 6877760 6877838 -246378745 - AluJo SINE Alu -17 295 222 771 166 0 58 chr2 6877908 6878047 -246378536 + FLAM_C SINE Alu 1 131 -2 2288 110 0 3 chr2 6878235 6878545 -246378038 - AluSc SINE Alu 0 309 1 1171 150 87 5 chr2 6878563 6878770 -246377813 - AluJo SINE Alu -88 224 1 556 296 38 47 chr2 6880055 6880372 -246376211 + MER90 LTR ERV1 77 390 -185 677 244 43 82 chr2 6880410 6880738 -246375845 + L1M4 LINE L1 24 338 -6204 296 215 108 46 chr2 6881499 6881629 -246374954 + MIR SINE MIR 88 225 -37 2068 133 10 0 chr2 6881795 6882089 -246374494 - AluSg SINE Alu -13 297 1 40 67 0 0 chr2 6882180 6882255 -246374328 + AT_rich Low_complexity Low_complexity 1 75 0 306 253 0 0 chr2 6883139 6883218 -246373365 + MLT1I LTR MaLR 317 395 -14 236 169 135 34 chr2 6884864 6884953 -246371630 - L1PA11 LINE L1 0 6174 6077 2066 197 163 27 chr2 6884955 6885057 -246371526 - Charlie1 DNA MER1_type -353 2408 2321 2323 103 3 6 chr2 6885057 6885369 -246371214 - AluSx SINE Alu -1 311 1 2066 197 163 27 chr2 6885369 6885561 -246371022 - Charlie1 DNA MER1_type -440 2321 2157 2150 140 3 3 chr2 6885561 6885868 -246370715 - AluSx SINE Alu -5 307 1 2066 197 163 27 chr2 6885868 6886067 -246370516 - Charlie1 DNA MER1_type -604 2157 1987 2073 122 10 16 chr2 6886067 6886378 -246370205 - AluSx SINE Alu -3 309 1 2066 197 163 27 chr2 6886378 6886556 -246370027 - Charlie1 DNA MER1_type -774 1987 1643 259 154 0 0 chr2 6886657 6886696 -246369887 - Alu SINE Alu -261 39 1 314 262 267 11 chr2 6886931 6887109 -246369474 + MIR SINE MIR 4 228 -34 794 250 65 22 chr2 6887161 6887393 -246369190 + MIR SINE MIR 20 261 -1 220 214 61 102 chr2 6887426 6887482 -246369101 + MIR SINE MIR 158 215 -47 1853 163 3 0 chr2 6887482 6887764 -246368819 + AluSx SINE Alu 1 283 -29 198 0 0 0 chr2 6887765 6887787 -246368796 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 220 214 61 102 chr2 6887787 6887826 -246368757 + MIR SINE MIR 214 251 -11 351 330 80 14 chr2 6888956 6889168 -246367415 + MIR SINE MIR 29 254 -8 2228 107 10 0 chr2 6889232 6889523 -246367060 - AluSq SINE Alu -19 294 1 2263 118 0 0 chr2 6890201 6890507 -246366076 - AluSx SINE Alu -6 306 1 2206 123 3 0 chr2 6892096 6892404 -246364179 - AluSx SINE Alu -3 309 1 192 97 0 0 chr2 6892964 6892995 -246363588 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2357 97 0 0 chr2 6893006 6893305 -246363278 - AluSg SINE Alu -11 299 1 24 67 0 0 chr2 6894045 6894090 -246362493 + AT_rich Low_complexity Low_complexity 1 45 0 1725 181 9 17 chr2 6894091 6894440 -246362143 - L1MA5 LINE L1 -174 6126 5781 2338 94 3 0 chr2 6894442 6894740 -246361843 - AluSx SINE Alu -13 299 1 530 309 87 17 chr2 6894882 6895112 -246361471 + MIR SINE MIR 14 259 -3 207 282 42 0 chr2 6895260 6895331 -246361252 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 1345 148 145 28 chr2 6895592 6895916 -246360667 + L1MB5 LINE L1 5813 6174 0 248 252 84 37 chr2 6896077 6896184 -246360399 - L2 LINE L2 -862 2452 2341 408 214 143 9 chr2 6896366 6896478 -246360105 - MER94 DNA DNA -1 133 7 206 319 0 14 chr2 6896706 6896775 -246359808 - L3 LINE CR1 -1 1576 1509 23 0 0 0 chr2 6897743 6897766 -246358817 + AT_rich Low_complexity Low_complexity 1 23 0 43 20 0 0 chr2 6898241 6898291 -246358292 + AT_rich Low_complexity Low_complexity 1 50 0 2484 86 0 0 chr2 6899778 6900091 -246356492 + AluSq SINE Alu 1 313 0 760 289 50 11 chr2 6900104 6900384 -246356199 + HAL1 LINE L1 1637 1927 -580 530 281 105 4 chr2 6900620 6900848 -246355735 + HAL1 LINE L1 2050 2300 -207 25 0 0 0 chr2 6901622 6901647 -246354936 + AT_rich Low_complexity Low_complexity 1 25 0 2463 84 0 3 chr2 6902141 6902451 -246354132 + AluY SINE Alu 1 309 -2 249 161 0 54 chr2 6904917 6904973 -246351610 - MER5B DNA MER1_type 0 178 126 2092 136 10 3 chr2 6904982 6905292 -246351291 + AluSx SINE Alu 1 312 0 1333 143 39 54 chr2 6906312 6906592 -246349991 - AluJo SINE Alu -4 308 33 325 277 195 56 chr2 6906986 6907158 -246349425 - L1M2 LINE L1 -5446 1403 1256 182 36 0 36 chr2 6907158 6907186 -246349397 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 325 277 195 56 chr2 6907186 6907496 -246349087 - L1M2 LINE L1 -5593 1256 854 2497 30 40 0 chr2 6907792 6908088 -246348495 + AluY SINE Alu 1 308 -3 259 253 148 44 chr2 6908725 6908907 -246347676 - L2 LINE L2 -467 2847 2647 233 333 10 30 chr2 6910178 6910277 -246346306 + MIR3 SINE MIR 78 174 -34 253 331 37 22 chr2 6910753 6910889 -246345694 - MIR SINE MIR -77 185 48 205 318 27 87 chr2 6910897 6911196 -246345387 - L2 LINE L2 -82 3190 2910 2499 77 0 0 chr2 6911923 6912234 -246344349 - AluY SINE Alu 0 311 1 718 223 99 21 chr2 6914940 6915173 -246341410 - MLT1C LTR MaLR -213 254 4 180 77 0 0 chr2 6915181 6915207 -246341376 + (CA)n Simple_repeat Simple_repeat 1 26 0 335 256 116 43 chr2 6915275 6915531 -246341052 - MLT1L LTR MaLR -7 608 235 313 246 25 68 chr2 6915904 6916022 -246340561 + L2 LINE L2 3156 3268 -4 180 296 0 0 chr2 6916471 6916515 -246340068 - L2 LINE L2 -12 3301 3258 1155 196 107 0 chr2 6916911 6917181 -246339402 + MER33 DNA MER1_type 5 303 -21 184 286 131 12 chr2 6917579 6917663 -246338920 + L2 LINE L2 2519 2612 -702 21 36 0 0 chr2 6918801 6918829 -246337754 + AT_rich Low_complexity Low_complexity 1 28 0 256 176 14 14 chr2 6919834 6919908 -246336675 + (TA)n Simple_repeat Simple_repeat 1 74 0 1924 163 0 7 chr2 6919909 6920204 -246336379 - AluJb SINE Alu -19 293 1 186 324 9 72 chr2 6920563 6920674 -246335909 + MIR SINE MIR 105 208 -54 2233 247 40 16 chr2 6920991 6921724 -246334859 - L1M4 LINE L1 -3250 2896 2147 22 0 0 0 chr2 6922984 6923006 -246333577 + AT_rich Low_complexity Low_complexity 1 22 0 665 281 85 68 chr2 6923042 6923700 -246332883 - L1MC4a LINE L1 -1885 5923 5255 262 214 306 0 chr2 6924084 6924182 -246332401 + MIR SINE MIR 15 142 -120 701 289 100 39 chr2 6924279 6924719 -246331864 + L2 LINE L2 438 904 -2410 221 279 132 37 chr2 6924719 6924855 -246331728 + L2 LINE L2 2051 2199 -1115 245 291 35 64 chr2 6925202 6925343 -246331240 + L2 LINE L2 2435 2571 -743 340 283 168 29 chr2 6925438 6925611 -246330972 + L2 LINE L2 2960 3156 -157 245 233 0 23 chr2 6925611 6925697 -246330886 + (CATA)n Simple_repeat Simple_repeat 4 87 0 378 0 0 0 chr2 6926153 6926195 -246330388 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 0 62 0 chr2 6927535 6927567 -246329016 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2391 78 10 0 chr2 6927567 6927862 -246328721 - AluSq SINE Alu -15 298 1 4578 205 40 24 chr2 6927872 6929653 -246326930 - L1MB7 LINE L1 -1 6419 4619 394 290 120 4 chr2 6929646 6929922 -246326661 - L1MB7 LINE L1 -3898 2486 2179 * 196 247 124 21 chr2 6930756 6930853 -246325730 - L2 LINE L2 -4 3268 3162 428 273 132 18 chr2 6931006 6931435 -246325148 - L2 LINE L2 -219 3094 2615 1628 297 163 31 chr2 6931702 6932018 -246324565 - L2 LINE L2 -653 2661 2388 2200 112 0 0 chr2 6932018 6932303 -246324280 + AluSq SINE Alu 1 285 -28 1628 297 163 31 chr2 6932303 6933577 -246323006 - L2 LINE L2 -926 2388 861 195 42 0 0 chr2 6934311 6934335 -246322248 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2037 232 142 79 chr2 6935407 6936849 -246319734 + Charlie2a DNA MER1_type 1079 2611 -251 278 281 31 23 chr2 6936913 6937041 -246319542 + Charlie2a DNA MER1_type 2718 2846 -16 191 371 95 0 chr2 6937803 6937908 -246318675 - MIR SINE MIR -60 148 34 231 114 0 0 chr2 6938690 6938725 -246317858 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 25 0 0 0 chr2 6939137 6939162 -246317421 + AT_rich Low_complexity Low_complexity 1 25 0 213 171 24 0 chr2 6939243 6939284 -246317299 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1414 277 110 76 chr2 6939638 6942459 -246314124 - L1ME3 LINE L1 -290 5876 2892 2205 99 0 7 chr2 6942459 6942752 -246313831 + AluSq SINE Alu 1 291 -22 1414 277 110 76 chr2 6942752 6943432 -246313151 - L1ME3 LINE L1 -3274 2892 2237 1599 228 40 33 chr2 6948754 6949179 -246307404 - MSTC LTR MaLR 0 428 1 216 97 0 0 chr2 6950273 6950304 -246306279 + (TG)n Simple_repeat Simple_repeat 2 32 0 1514 223 66 85 chr2 6951242 6951866 -246304717 - LTR9 LTR ERV1 0 612 1 215 267 0 33 chr2 6952951 6953011 -246303572 + CT-rich Low_complexity Low_complexity 5 62 0 6920 31 8 0 chr2 6953491 6954295 -246302288 + L1PA3 LINE L1 5344 6153 -2 564 230 129 42 chr2 6956826 6957113 -246299470 + LTR16C LTR ERVL 180 491 0 1867 180 22 65 chr2 6958494 6958895 -246297688 + MLT1B LTR MaLR 1 384 -6 1657 153 65 48 chr2 6958907 6959076 -246297507 + MER46B DNA MER2_type 1 166 -2565 2261 94 10 0 chr2 6959076 6959375 -246297208 - AluY SINE Alu -9 302 1 1657 153 65 48 chr2 6959375 6959462 -246297121 + MER46B DNA MER2_type 166 143 -2588 2314 119 19 35 chr2 6959462 6959832 -246296751 + THE1B LTR MaLR 1 364 0 1657 153 65 48 chr2 6959832 6959926 -246296657 + MER46B DNA MER2_type 142 233 -3 287 314 44 0 chr2 6959929 6960066 -246296517 - MIR SINE MIR -108 154 12 565 254 38 34 chr2 6962253 6962462 -246294121 + MIR SINE MIR 15 224 -38 901 254 28 0 chr2 6963053 6963270 -246293313 + MER58A DNA MER1_type 2 224 0 497 226 161 30 chr2 6963612 6963842 -246292741 + MIR SINE MIR 3 262 0 24 0 0 0 chr2 6964149 6964173 -246292410 + AT_rich Low_complexity Low_complexity 1 24 0 2026 131 66 26 chr2 6964370 6964720 -246291863 - THE1B LTR MaLR 0 364 1 1779 174 0 10 chr2 6964856 6965155 -246291428 + AluJb SINE Alu 1 296 -16 1327 256 125 17 chr2 6965195 6965676 -246290907 - L1MC4a LINE L1 -1883 5925 5393 189 136 16 56 chr2 6965873 6965998 -246290585 + (TA)n Simple_repeat Simple_repeat 1 120 0 270 294 59 54 chr2 6966253 6966518 -246290065 - L1MC/D LINE L1 -446 5675 5444 225 356 8 0 chr2 6966519 6966637 -246289946 - MIR SINE MIR -57 151 33 317 267 50 69 chr2 6967006 6967208 -246289375 - L2 LINE L2 -5 3308 3111 299 343 20 0 chr2 6969030 6969132 -246287451 + MIR SINE MIR 47 150 -112 1599 164 60 38 chr2 6969140 6969505 -246287078 - THE1C LTR MaLR 0 375 3 9681 130 12 38 chr2 6969507 6971127 -246285456 - THE1C-int LTR MaLR 0 1580 3 1756 151 37 45 chr2 6971129 6971507 -246285076 - THE1C LTR MaLR 0 375 1 462 303 77 27 chr2 6973114 6973375 -246283208 + L2 LINE L2 2372 2645 -669 360 313 28 33 chr2 6973420 6973602 -246282981 + L2 LINE L2 3094 3274 -39 2452 90 0 3 chr2 6973606 6973917 -246282666 - AluSg SINE Alu 0 310 1 180 0 0 0 chr2 6974586 6974606 -246281977 + (T)n Simple_repeat Simple_repeat 1 20 0 2342 83 0 7 chr2 6974986 6975286 -246281297 - AluY SINE Alu -13 298 1 234 327 27 9 chr2 6975459 6975569 -246281014 - MIR SINE MIR -55 153 42 1660 212 87 2 chr2 6977480 6977895 -246278688 - L1MC3 LINE L1 -28 7757 7308 243 197 57 90 chr2 6978014 6978136 -246278447 - MLT1F1 LTR MaLR -437 130 13 3414 208 91 26 chr2 6978162 6979183 -246277400 - L1MC3 LINE L1 -947 7048 5893 590 217 71 11 chr2 6979198 6979382 -246277201 - L1MC1 LINE L1 -5 6328 6134 1028 205 29 29 chr2 6979389 6979662 -246276921 - MLT1A2 LTR MaLR -5 369 97 348 24 0 0 chr2 6979698 6979739 -246276844 + (CA)n Simple_repeat Simple_repeat 2 42 0 287 78 69 29 chr2 6979743 6979845 -246276738 + (TA)n Simple_repeat Simple_repeat 1 106 0 297 0 0 0 chr2 6979860 6979893 -246276690 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 240 133 27 chr2 6979919 6979994 -246276589 - MLT1A2 LTR MaLR -304 86 4 2620 174 30 8 chr2 6979994 6980524 -246276059 - L1MC1 LINE L1 -196 6137 5590 397 296 18 41 chr2 6980865 6981034 -246275549 + MIR SINE MIR 67 231 -31 331 135 29 144 chr2 6981045 6981149 -246275434 - L1MC4 LINE L1 -1341 6981 1980 598 257 27 48 chr2 6981478 6981665 -246274918 - MER5A DNA MER1_type 0 189 7 205 315 36 45 chr2 6983323 6983434 -246273149 - MIR SINE MIR -97 111 2 2011 156 77 31 chr2 6984653 6985168 -246271415 - MLT2A2 LTR ERVL 0 554 1 339 263 135 0 chr2 6985181 6985314 -246271269 - MIR SINE MIR -14 248 98 1902 105 4 8 chr2 6985800 6986058 -246270525 + AluSc SINE Alu 39 295 -14 1641 149 39 41 chr2 6987040 6987403 -246269180 + L1MA9 LINE L1 5950 6311 -1 198 263 100 50 chr2 6987770 6987850 -246268733 + L2 LINE L2 3169 3252 -20 310 229 280 8 chr2 6988863 6988981 -246267602 + MIR SINE MIR 20 169 -93 205 151 38 0 chr2 6990114 6990167 -246266416 + (TA)n Simple_repeat Simple_repeat 1 55 0 2483 88 0 0 chr2 6990308 6990614 -246265969 + AluSq SINE Alu 1 306 -7 225 0 73 24 chr2 6990632 6990673 -246265910 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 2076 153 0 0 chr2 6990687 6990988 -246265595 + AluJo SINE Alu 3 303 -9 442 256 125 57 chr2 6991119 6991295 -246265288 + MIR SINE MIR 49 236 -26 215 294 147 71 chr2 6991531 6991769 -246264814 - L2 LINE L2 0 3272 3017 461 212 30 0 chr2 6991906 6992005 -246264578 + Tigger3b DNA MER2_type 1 102 -1129 * 4199 130 50 84 chr2 6992003 6992994 -246263589 + Tigger3b DNA MER2_type 274 1231 0 261 256 60 51 chr2 6993257 6993374 -246263209 + MIR3 SINE MIR 52 169 -39 284 358 73 0 chr2 6999258 6999381 -246257202 - L2 LINE L2 -20 3252 3121 291 316 52 29 chr2 6999504 6999640 -246256943 - MIR SINE MIR -113 149 11 555 283 46 5 chr2 7000442 7000661 -246255922 - L1MA9 LINE L1 -38 6274 6047 298 372 141 5 chr2 7000723 7000914 -246255669 + MIR SINE MIR 25 241 -21 192 343 15 0 chr2 7001548 7001615 -246254968 - MIR SINE MIR -1 261 194 224 307 107 60 chr2 7002441 7002591 -246253992 - MIR SINE MIR -13 249 93 412 313 79 18 chr2 7003190 7003420 -246253163 + MIR SINE MIR 13 252 -10 299 192 0 0 chr2 7003534 7003586 -246252997 + L2 LINE L2 3261 3312 -1 505 95 0 0 chr2 7005347 7005421 -246251162 + FLAM_A SINE Alu 69 142 0 192 97 0 0 chr2 7006593 7006624 -246249959 + (T)n Simple_repeat Simple_repeat 1 31 0 581 246 102 60 chr2 7008215 7008430 -246248153 + MER58A DNA MER1_type 1 224 0 261 254 17 0 chr2 7010142 7010201 -246246382 - L2 LINE L2 -18 3295 3236 275 210 16 0 chr2 7011271 7011333 -246245250 + Charlie8 DNA MER1_type 102 164 -2253 494 286 17 17 chr2 7011869 7012044 -246244539 + MARNA DNA Mariner 177 351 -235 191 393 0 11 chr2 7012052 7012141 -246244442 - MIR SINE MIR -8 254 167 377 281 12 69 chr2 7012248 7012408 -246244175 - MIR SINE MIR 0 262 112 201 250 0 0 chr2 7013484 7013544 -246243039 + T-rich Low_complexity Low_complexity 1 60 0 429 277 50 0 chr2 7014106 7014225 -246242358 - MLT1B LTR MaLR -2 388 264 2139 133 7 0 chr2 7014681 7014990 -246241593 + AluSx SINE Alu 1 311 -1 222 194 0 104 chr2 7017712 7017779 -246238804 + MER5B DNA MER1_type 109 168 -10 456 19 0 0 chr2 7019544 7019597 -246236986 + (TG)n Simple_repeat Simple_repeat 2 54 0 3499 121 13 26 chr2 7019937 7020468 -246236115 - MER1A DNA MER1_type 0 527 4 385 305 68 28 chr2 7020545 7020722 -246235861 - L2 LINE L2 -9 3304 3121 270 288 62 27 chr2 7020693 7020839 -246235744 - L2 LINE L2 -445 2869 2719 * 315 303 63 0 chr2 7021088 7021230 -246235353 - MER58A DNA MER1_type -31 193 43 528 193 37 9 chr2 7021230 7021339 -246235244 + L1MB8 LINE L1 6060 6171 -7 1443 214 49 45 chr2 7021686 7022135 -246234448 - MLT1C LTR MaLR -16 451 1 359 262 104 0 chr2 7022422 7022654 -246233929 - MLT1G1 LTR MaLR -12 583 236 688 90 0 0 chr2 7023483 7023572 -246233011 + AluSg/x SINE Alu 206 294 -15 237 213 133 0 chr2 7024700 7024775 -246231808 + MER112 DNA MER1_type 145 229 -31 182 306 94 12 chr2 7026124 7026209 -246230374 + MIR3 SINE MIR 110 201 -7 285 252 37 47 chr2 7027266 7027373 -246229210 - MIR3 SINE MIR -6 202 97 214 314 0 29 chr2 7028095 7028165 -246228418 + GA-rich Low_complexity Low_complexity 4 71 0 * 812 213 26 6 chr2 7028145 7028460 -246228123 + (TGGA)n Simple_repeat Simple_repeat 1 321 0 432 171 0 0 chr2 7028476 7028558 -246228025 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 767 154 15 12 chr2 7028580 7028849 -246227734 + (TGGA)n Simple_repeat Simple_repeat 1 270 0 758 148 11 33 chr2 7028867 7029050 -246227533 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2370 101 0 0 chr2 7032367 7032674 -246223909 - AluSq SINE Alu -6 307 1 242 307 41 96 chr2 7034370 7034640 -246221943 - L2 LINE L2 -61 3211 2957 1632 209 64 9 chr2 7034788 7035224 -246221359 - MLT1C LTR MaLR -4 463 4 28 29 0 0 chr2 7036363 7036398 -246220185 + AT_rich Low_complexity Low_complexity 1 35 0 212 185 0 15 chr2 7036751 7036816 -246219767 + (TG)n Simple_repeat Simple_repeat 1 64 0 2452 92 45 0 chr2 7036821 7037156 -246219427 - THE1A LTR MaLR 0 355 6 204 296 17 43 chr2 7037862 7037977 -246218606 - MIR SINE MIR -76 186 75 180 315 19 0 chr2 7038769 7038823 -246217760 + L2 LINE L2 3218 3272 0 231 233 82 0 chr2 7039169 7039242 -246217341 + L3 LINE CR1 639 717 -860 2321 135 25 0 chr2 7039639 7039994 -246216589 + THE1B LTR MaLR 1 364 0 216 359 38 19 chr2 7040389 7040495 -246216088 - MIR SINE MIR -58 150 43 1655 108 0 0 chr2 7041111 7041323 -246215260 + AluSq SINE Alu 1 212 -101 231 250 76 22 chr2 7041832 7041924 -246214659 - MIR SINE MIR -74 188 92 216 0 0 0 chr2 7042343 7042367 -246214216 + (CA)n Simple_repeat Simple_repeat 2 25 0 405 227 62 0 chr2 7042679 7042776 -246213807 + MER5A DNA MER1_type 7 109 -80 1008 260 149 6 chr2 7042814 7043149 -246213434 - MLT1E LTR MaLR 0 593 211 2514 135 75 96 chr2 7043217 7043808 -246212775 + LTR18B LTR ERVL 1 578 -36 213 121 0 0 chr2 7043832 7043865 -246212718 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 319 237 322 0 chr2 7043872 7043990 -246212593 - MLT1E LTR MaLR -435 158 3 368 237 0 0 chr2 7044070 7044146 -246212437 + MLT1A1 LTR MaLR 1 76 -289 873 173 73 21 chr2 7044173 7044364 -246212219 + MLT1A1 LTR MaLR 165 365 0 196 332 135 43 chr2 7044405 7045145 -246211438 + L2 LINE L2 1812 2619 -695 228 177 0 177 chr2 7045925 7046004 -246210579 + MLT1B LTR MaLR 1 65 -325 188 288 17 0 chr2 7046780 7046839 -246209744 + L2 LINE L2 3248 3307 -6 229 286 56 48 chr2 7046938 7047064 -246209519 + MIR SINE MIR 16 142 -66 974 255 92 28 chr2 7047897 7048427 -246208156 - L1MC5 LINE L1 -47 7914 7351 2376 85 3 0 chr2 7048570 7048863 -246207720 + AluY SINE Alu 1 294 -17 235 300 29 0 chr2 7049646 7049716 -246206867 + CT-rich Low_complexity Low_complexity 6 77 0 722 275 81 95 chr2 7051439 7051955 -246204628 - MLT1H LTR MaLR 0 549 41 210 71 0 0 chr2 7052002 7052030 -246204553 + (A)n Simple_repeat Simple_repeat 1 28 0 264 331 115 22 chr2 7052878 7053340 -246203243 - L2 LINE L2 -925 2389 1885 1651 185 51 48 chr2 7053358 7053753 -246202830 - MSTD LTR MaLR 0 396 1 389 325 0 0 chr2 7054568 7054685 -246201898 - MIR SINE MIR -5 257 141 231 121 0 0 chr2 7054930 7054963 -246201620 + MER31B LTR ERV1 1 33 -433 416 258 10 33 chr2 7054965 7055131 -246201452 + MER31A-int LTR ERV1 3082 3768 -2178 * 8284 177 50 44 chr2 7055110 7055584 -246200999 + MER31A-int LTR ERV1 3102 3572 -1364 2475 81 0 0 chr2 7055584 7055891 -246200692 - AluY SINE Alu -4 307 1 8284 177 50 44 chr2 7055891 7057221 -246199362 + MER31A-int LTR ERV1 3572 4916 -20 2397 159 24 50 chr2 7057221 7057719 -246198864 + MER31A LTR ERV1 1 485 0 311 294 137 0 chr2 7058471 7058617 -246197966 - MIR SINE MIR -78 184 19 217 336 0 28 chr2 7058967 7059110 -246197473 + CT-rich Low_complexity Low_complexity 4 142 0 1230 180 0 14 chr2 7059673 7059890 -246196693 - AluJb SINE Alu -13 299 86 1401 196 42 99 chr2 7059985 7060437 -246196146 + MLT1C LTR MaLR 1 424 -43 2377 96 0 3 chr2 7060437 7060740 -246195843 - AluSx SINE Alu -10 302 1 1401 196 42 99 chr2 7060740 7060782 -246195801 + MLT1C LTR MaLR 424 467 0 227 332 73 32 chr2 7060933 7061153 -246195430 + MIR SINE MIR 21 249 -13 1017 240 40 49 chr2 7061206 7061535 -246195048 + MLT2C1 LTR ERVL 6 331 -66 865 182 6 0 chr2 7061596 7061761 -246194822 + MLT1C-int LTR MaLR 22 187 -1184 * 957 221 103 0 chr2 7061758 7061962 -246194621 + MLT1C-int LTR MaLR 341 565 -806 249 301 170 20 chr2 7062112 7062265 -246194318 + L2 LINE L2 3097 3272 0 283 235 37 12 chr2 7062924 7063005 -246193578 + MER91B DNA MER1_type 57 139 -51 350 256 0 0 chr2 7063164 7063250 -246193333 - MIR SINE MIR -1 261 176 290 311 49 33 chr2 7064130 7064252 -246192331 + L2 LINE L2 3134 3257 -15 442 176 0 20 chr2 7064258 7064360 -246192223 + GA-rich Low_complexity Low_complexity 1 100 0 636 246 154 71 chr2 7064552 7064890 -246191693 - MLT1G3 LTR MaLR -42 488 123 893 216 98 98 chr2 7064894 7065253 -246191330 + MSTC LTR MaLR 1 412 -16 3013 81 0 3 chr2 7065698 7066083 -246190500 - L1PA7 LINE L1 -13 6141 5758 1225 196 56 49 chr2 7066754 7067060 -246189523 - MLT2B3 LTR ERVL 0 554 247 218 323 30 20 chr2 7069309 7069408 -246187175 - MIR SINE MIR -112 150 51 1446 205 32 46 chr2 7069521 7069891 -246186692 + MLT1A1 LTR MaLR 1 365 0 345 309 9 0 chr2 7070639 7070749 -246185834 + L2 LINE L2 3200 3310 -3 223 197 0 42 chr2 7070994 7071065 -246185518 + G-rich Low_complexity Low_complexity 2 69 0 1647 151 64 0 chr2 7072593 7072858 -246183725 + AluSx SINE Alu 1 282 -30 360 326 85 35 chr2 7074606 7074983 -246181600 + L1ME LINE L1 5429 5824 -297 423 229 14 25 chr2 7075373 7075514 -246181069 - MLT1G1 LTR MaLR -400 195 3 356 167 0 0 chr2 7075515 7075575 -246181008 - MER112 DNA MER1_type -193 67 8 297 257 112 26 chr2 7075927 7076079 -246180504 - L1ME LINE L1 -380 5741 5577 240 86 0 0 chr2 7078927 7078962 -246177621 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 2089 257 84 55 chr2 7079287 7080519 -246176064 + L1ME2 LINE L1 3281 4683 -1463 349 83 0 0 chr2 7080519 7080567 -246176016 - MADE1 DNA Mariner 0 80 33 2089 257 84 55 chr2 7080567 7080677 -246175906 + L1ME2 LINE L1 4683 4788 -1358 1119 236 24 39 chr2 7080685 7081016 -246175567 + MER58B DNA MER1_type 1 326 -15 1339 266 65 49 chr2 7081031 7082186 -246174397 + L1ME2 LINE L1 4791 5921 -243 1520 102 56 0 chr2 7082186 7082402 -246174181 + MER30 DNA MER1_type 3 230 0 1339 266 65 49 chr2 7082402 7082511 -246174072 + L1ME2 LINE L1 5921 6027 -137 1018 216 112 75 chr2 7082725 7083100 -246173483 + MLT1B LTR MaLR 2 390 0 893 196 30 0 chr2 7083142 7083310 -246173273 - MER58B DNA MER1_type -1 340 168 2777 241 51 12 chr2 7083672 7084591 -246171992 + L1PA12 LINE L1 2254 3146 -4438 12280 233 17 37 chr2 7084592 7088101 -246168482 - L1P LINE L1 -1082 5064 1627 267 263 25 0 chr2 7088597 7088677 -246167906 + MER103 DNA DNA 7 88 -78 288 170 0 0 chr2 7089333 7089386 -246167197 + (TG)n Simple_repeat Simple_repeat 1 53 0 296 324 29 0 chr2 7090828 7090930 -246165653 - MIR SINE MIR -62 200 96 2017 138 17 3 chr2 7092046 7092344 -246164239 + AluJb SINE Alu 1 302 -10 28 0 0 0 chr2 7092395 7092423 -246164160 + AT_rich Low_complexity Low_complexity 1 28 0 628 151 95 0 chr2 7092651 7092777 -246163806 - L1MA9 LINE L1 0 6312 6175 208 148 0 37 chr2 7092783 7092837 -246163746 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 225 213 0 0 chr2 7092846 7092893 -246163690 - L1MA9 LINE L1 -147 6165 6119 369 149 0 0 chr2 7093563 7093630 -246162953 + (TG)n Simple_repeat Simple_repeat 1 67 0 4570 132 7 11 chr2 7093847 7094561 -246162022 + MER50 LTR ERV1 1 711 -23 260 318 59 34 chr2 7094695 7094934 -246161649 - L2 LINE L2 -852 2462 2218 2209 119 0 0 chr2 7095323 7095618 -246160965 - AluSx SINE Alu -17 295 1 3817 148 39 10 chr2 7096087 7096789 -246159794 - MER50 LTR ERV1 -12 722 1 218 294 56 40 chr2 7096798 7096924 -246159659 - L2 LINE L2 -512 2802 2675 841 144 20 0 chr2 7098221 7098367 -246158216 - L1MA5A LINE L1 0 6297 6149 239 293 0 37 chr2 7098710 7098792 -246157791 + MIR SINE MIR 38 116 -92 2072 118 43 38 chr2 7099292 7099665 -246156918 + THE1C LTR MaLR 1 375 0 433 315 55 22 chr2 7100267 7100632 -246155951 - L1M4 LINE L1 -2164 3982 3606 188 65 0 32 chr2 7100640 7100671 -246155912 + (TCC)n Simple_repeat Simple_repeat 3 32 0 335 280 73 7 chr2 7101002 7101152 -246155431 - L1M4 LINE L1 -2922 3224 3065 2194 131 0 0 chr2 7101780 7102086 -246154497 - AluSq SINE Alu -7 306 1 238 247 0 71 chr2 7102392 7102477 -246154106 + T-rich Low_complexity Low_complexity 2 80 0 315 113 0 0 chr2 7102893 7102946 -246153637 + (TG)n Simple_repeat Simple_repeat 2 54 0 2019 121 79 25 chr2 7104387 7104743 -246151840 + THE1C LTR MaLR 1 375 0 1844 153 0 0 chr2 7105125 7105419 -246151164 + AluSx SINE Alu 22 315 0 304 316 66 20 chr2 7106982 7107134 -246149449 + MER5B DNA MER1_type 1 159 -19 302 250 20 60 chr2 7108518 7108618 -246147965 + MIR SINE MIR 50 145 -63 252 122 0 0 chr2 7109276 7109317 -246147266 + (TG)n Simple_repeat Simple_repeat 2 42 0 2295 84 0 37 chr2 7110424 7110746 -246145837 - AluSg SINE Alu 0 310 1 830 144 106 48 chr2 7110841 7110916 -246145667 + THE1C LTR MaLR 1 70 -305 2523 112 14 16 chr2 7110916 7111281 -246145302 + THE1B LTR MaLR 1 364 0 830 144 106 48 chr2 7111281 7111413 -246145170 + THE1C LTR MaLR 70 220 -155 366 23 0 0 chr2 7111887 7111930 -246144653 + (CA)n Simple_repeat Simple_repeat 1 43 0 1226 186 13 13 chr2 7111946 7112182 -246144401 + MER46A DNA MER2_type 1 236 0 475 239 117 35 chr2 7112292 7112522 -246144061 - HAL1 LINE L1 -10 2497 2249 707 318 64 41 chr2 7112609 7113317 -246143266 - HAL1 LINE L1 -533 1974 1251 344 233 0 33 chr2 7113338 7113428 -246143155 - HAL1 LINE L1 -1355 1152 1066 1306 247 98 43 chr2 7113488 7113958 -246142625 - MLT1D LTR MaLR -9 496 1 421 309 34 7 chr2 7113982 7114131 -246142452 - HAL1 LINE L1 -1189 1318 1166 1138 239 97 50 chr2 7114254 7114793 -246141790 - HAL1 LINE L1 -1313 1194 631 330 281 87 20 chr2 7116094 7116290 -246140293 - MIR SINE MIR -13 249 41 21 0 0 0 chr2 7116545 7116566 -246140017 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 7117534 7117569 -246139014 + AT_rich Low_complexity Low_complexity 1 35 0 210 106 47 35 chr2 7117576 7117661 -246138922 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 23 0 0 0 chr2 7117664 7117687 -246138896 + AT_rich Low_complexity Low_complexity 1 23 0 197 346 79 0 chr2 7119275 7119376 -246137207 - MIR SINE MIR -84 124 16 643 64 0 32 chr2 7119935 7120029 -246136554 - L1PA8 LINE L1 0 6172 6082 318 128 0 0 chr2 7120029 7120076 -246136507 - L1PA8 LINE L1 -44 6128 6082 349 85 0 0 chr2 7120076 7120123 -246136460 - L1PA8A LINE L1 -42 6089 6043 * 383 56 0 153 chr2 7120098 7120170 -246136413 - L1PA8 LINE L1 -30 6142 6082 356 64 0 0 chr2 7120170 7120217 -246136366 - L1PA8 LINE L1 -44 6128 6082 354 104 0 0 chr2 7120217 7120265 -246136318 - L1PA8 LINE L1 -44 6128 6081 379 43 0 0 chr2 7120265 7120311 -246136272 - L1PA8 LINE L1 -45 6127 6082 * 383 56 0 153 chr2 7120286 7120358 -246136225 - L1PA8 LINE L1 -30 6142 6082 330 110 0 151 chr2 7120333 7120406 -246136177 - L1PA8 LINE L1 -30 6142 6081 * 379 43 0 0 chr2 7120406 7120452 -246136131 - L1PA8 LINE L1 -45 6127 6082 370 69 0 153 chr2 7120427 7120499 -246136084 - L1PA8A LINE L1 -28 6103 6043 * 755 74 0 90 chr2 7120474 7120596 -246135987 - L1PA8 LINE L1 -30 6142 6032 334 325 12 31 chr2 7120841 7121004 -246135579 + MIR SINE MIR 77 236 -26 238 311 48 10 chr2 7121323 7121426 -246135157 - MIR SINE MIR -150 112 6 856 303 129 21 chr2 7121531 7122112 -246134471 + L2 LINE L2 2112 2755 -559 190 313 78 100 chr2 7122597 7123108 -246133475 + L2 LINE L2 2809 3308 -5 264 217 158 33 chr2 7124244 7124364 -246132219 + L2 LINE L2 2235 2369 -945 359 309 144 45 chr2 7125049 7125250 -246131333 + L1MEd LINE L1 411 631 -5488 369 273 0 10 chr2 7125546 7125645 -246130938 - MER5A DNA MER1_type -83 106 9 555 247 20 13 chr2 7125679 7125829 -246130754 - MLT1E2 LTR MaLR -3 623 473 2593 138 4 5 chr2 7125923 7126372 -246130211 - L1P LINE L1 -1544 4602 4158 1824 253 109 20 chr2 7126381 7127094 -246129489 - L1ME1 LINE L1 -17 6149 5373 289 200 43 87 chr2 7127103 7127126 -246129457 - L1ME1 LINE L1 -846 5300 5278 2181 80 0 3 chr2 7127126 7127412 -246129171 + L1PA5 LINE L1 5870 6154 0 289 200 43 87 chr2 7127412 7127503 -246129080 - L1ME1 LINE L1 -868 5278 5191 * 7412 148 55 27 chr2 7127497 7127977 -246128606 + L1MCa LINE L1 69 534 -5892 1573 175 44 34 chr2 7127977 7128274 -246128309 - AluJo SINE Alu -12 300 1 7412 148 55 27 chr2 7128274 7129204 -246127379 + L1MCa LINE L1 534 1510 -4916 2494 146 41 7 chr2 7129204 7129615 -246126968 + MSTA LTR MaLR 1 425 -3 7412 148 55 27 chr2 7129615 7129755 -246126828 + L1MCa LINE L1 1510 1645 -4781 1213 268 51 28 chr2 7129760 7130253 -246126330 - L1ME1 LINE L1 -2362 3784 3281 400 167 14 0 chr2 7130260 7130332 -246126251 - 7SK RNA RNA 0 193 121 604 152 0 9 chr2 7130368 7130480 -246126103 - 7SK RNA RNA -68 125 15 6213 64 7 7 chr2 7130481 7131600 -246124983 + L1PA7 LINE L1 4918 6039 -115 1006 263 92 46 chr2 7131759 7132245 -246124338 - MLT1E LTR MaLR 0 593 103 569 194 0 0 chr2 7132231 7132324 -246124259 - MLT1E LTR MaLR -449 144 52 * 239 139 0 0 chr2 7132734 7132770 -246123813 + L1P LINE L1 5224 5259 -887 246 357 7 50 chr2 7134231 7134371 -246122212 - MIR SINE MIR -51 211 78 258 282 24 73 chr2 7134522 7134646 -246121937 - L2 LINE L2 -218 3054 2937 194 286 62 71 chr2 7135023 7135135 -246121448 - L2 LINE L2 -11 3302 3192 2446 74 0 0 chr2 7135865 7136161 -246120422 + AluSg SINE Alu 1 296 -14 2015 141 0 0 chr2 7136476 7136774 -246119809 - AluSx SINE Alu -14 298 1 2180 126 7 0 chr2 7137151 7137453 -246119130 - AluSq SINE Alu -9 304 1 1206 95 0 0 chr2 7137466 7137624 -246118959 - AluY SINE Alu -8 303 146 321 293 34 27 chr2 7138263 7138410 -246118173 - MLT1I LTR MaLR -2 407 260 911 188 73 5 chr2 7139973 7140165 -246116418 + MLT2C1 LTR ERVL 1 205 -192 798 226 68 30 chr2 7140146 7140380 -246116203 + MLT1C LTR MaLR 225 467 0 * 6047 264 77 23 chr2 7140934 7143432 -246113151 + L1MEc LINE L1 46 2644 -3571 2363 189 38 2 chr2 7144539 7144956 -246111627 - MSTB1 LTR MaLR 0 432 1 2530 149 28 28 chr2 7145519 7145947 -246110636 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr2 7147450 7147472 -246109111 + AT_rich Low_complexity Low_complexity 1 22 0 1265 221 164 45 chr2 7147487 7148010 -246108573 - L1MC2 LINE L1 0 7970 6186 281 218 30 69 chr2 7148010 7148111 -246108472 - MLT1I LTR MaLR -436 131 35 724 143 45 112 chr2 7148129 7148352 -246108231 - L1MC3 LINE L1 -706 7079 6872 204 40 0 0 chr2 7148362 7148387 -246108196 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 246 32 0 0 chr2 7148393 7148424 -246108159 + (CA)n Simple_repeat Simple_repeat 2 32 0 1365 217 75 63 chr2 7148424 7148924 -246107659 - L1MC3 LINE L1 -1230 6555 6050 5677 176 118 101 chr2 7148961 7149551 -246107032 - L1MCa LINE L1 -4184 2242 1663 186 43 0 0 chr2 7149551 7149574 -246107009 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5677 176 118 101 chr2 7149574 7150937 -246105646 - L1MCa LINE L1 -4763 1663 256 314 292 34 0 chr2 7151034 7151123 -246105460 - L1MC4 LINE L1 -1339 6703 6612 418 168 15 23 chr2 7151124 7151255 -246105328 + (TA)n Simple_repeat Simple_repeat 1 130 0 1649 182 3 20 chr2 7151260 7151556 -246105027 - AluJb SINE Alu -21 291 1 252 395 8 8 chr2 7152575 7152709 -246103874 - MIR3 SINE MIR -38 170 37 385 314 108 10 chr2 7153566 7153760 -246102823 - MIR SINE MIR 0 262 50 300 198 42 18 chr2 7154152 7154319 -246102264 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 466 140 20 0 chr2 7154481 7154581 -246102002 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 1890 153 10 0 chr2 7155321 7155629 -246100954 - AluSx SINE Alu -1 311 1 195 114 0 0 chr2 7156074 7156109 -246100474 + (CTTA)n Simple_repeat Simple_repeat 2 36 0 229 250 0 0 chr2 7156459 7156507 -246100076 - MIR SINE MIR -129 79 32 23 0 0 0 chr2 7156940 7156963 -246099620 + AT_rich Low_complexity Low_complexity 1 23 0 494 16 16 0 chr2 7159566 7159629 -246096954 + (TC)n Simple_repeat Simple_repeat 2 65 0 558 303 90 10 chr2 7159979 7160279 -246096304 + L2 LINE L2 1984 2307 -1007 198 244 22 0 chr2 7160566 7160611 -246095972 + MIR3 SINE MIR 135 180 -28 1107 233 51 10 chr2 7160740 7161036 -246095547 + MLT1C LTR MaLR 152 459 -8 290 321 18 28 chr2 7161045 7161154 -246095429 + L2 LINE L2 2344 2451 -863 506 340 36 57 chr2 7161258 7161593 -246094990 + L2 LINE L2 2986 3313 0 1371 101 48 18 chr2 7162240 7162467 -246094116 - L1MA8 LINE L1 -6 6285 6052 239 342 82 6 chr2 7162705 7162863 -246093720 - MIR SINE MIR -55 207 38 1720 185 44 15 chr2 7163386 7163670 -246092913 + MLT2B2 LTR ERVL 1 275 -279 207 0 0 0 chr2 7163670 7163693 -246092890 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1720 185 44 15 chr2 7163693 7163833 -246092750 + MLT2B2 LTR ERVL 275 410 -144 986 54 42 0 chr2 7163833 7164000 -246092583 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1720 185 44 15 chr2 7164000 7164018 -246092565 + MLT2B2 LTR ERVL 410 552 -2 1119 40 0 0 chr2 7164886 7165011 -246091572 + AluY SINE Alu 1 125 -186 9985 26 2 1 chr2 7165011 7166948 -246089635 + L1PA3 LINE L1 4230 6169 0 2143 123 0 19 chr2 7166963 7167272 -246089311 + AluSx SINE Alu 3 305 -7 319 186 0 17 chr2 7167282 7167341 -246089242 - LTR67 LTR ERVL -86 471 414 435 153 153 0 chr2 7167391 7167476 -246089107 - MER53 DNA DNA -91 98 1 252 246 15 0 chr2 7167689 7167754 -246088829 + L1ME LINE L1 5367 5432 -732 386 221 271 0 chr2 7167781 7167903 -246088680 + MIR SINE MIR 12 166 -96 2196 102 3 0 chr2 7167953 7168257 -246088326 - AluSp SINE Alu -3 310 6 377 260 21 10 chr2 7168332 7168428 -246088155 + L2 LINE L2 39 135 -3179 2730 167 28 28 chr2 7168455 7168999 -246087584 + L1MC3 LINE L1 7241 7784 -1 23 0 0 0 chr2 7168999 7169022 -246087561 + AT_rich Low_complexity Low_complexity 1 23 0 1595 62 0 0 chr2 7169022 7169214 -246087369 + AluY SINE Alu 118 309 -2 315 0 0 0 chr2 7169220 7169255 -246087328 + (TAA)n Simple_repeat Simple_repeat 2 36 0 349 267 139 0 chr2 7170146 7170247 -246086336 + MER5B DNA MER1_type 4 118 -60 948 182 61 22 chr2 7170708 7170939 -246085644 - LTR32 LTR ERVL 0 471 232 279 203 78 0 chr2 7170921 7170985 -246085598 - LTR32 LTR ERVL -400 71 3 * 334 257 83 0 chr2 7170991 7171100 -246085483 - L2 LINE L2 -79 3234 3117 794 192 46 0 chr2 7171548 7171699 -246084884 + MER97c DNA MER1_type? 19 176 -914 1345 101 0 0 chr2 7172453 7172621 -246083962 + AluSc SINE Alu 134 301 -8 912 336 126 19 chr2 7172759 7173444 -246083139 - ERVL LTR ERVL -284 5480 4723 206 328 48 40 chr2 7174013 7174138 -246082445 - MIR SINE MIR -59 203 78 279 243 57 0 chr2 7174262 7174332 -246082251 + MER91B DNA MER1_type 6 79 -111 301 179 18 0 chr2 7175408 7175464 -246081119 + MER91B DNA MER1_type 6 62 -128 204 313 51 21 chr2 7176158 7176294 -246080289 + MIR SINE MIR 3 135 -73 21 0 0 0 chr2 7176313 7176334 -246080249 + AT_rich Low_complexity Low_complexity 1 21 0 2258 104 44 41 chr2 7176777 7177143 -246079440 + THE1C LTR MaLR 5 371 -4 581 277 116 31 chr2 7177363 7177655 -246078928 + LTR33 LTR ERVL 205 521 0 1066 81 0 0 chr2 7177748 7177884 -246078699 + AluY SINE Alu 173 308 -3 351 239 0 0 chr2 7178101 7178231 -246078352 + (TG)n Simple_repeat Simple_repeat 2 131 0 579 239 3 0 chr2 7178253 7178610 -246077973 + (TG)n Simple_repeat Simple_repeat 1 358 0 252 305 162 0 chr2 7179260 7179414 -246077169 - MIR3 SINE MIR -9 199 21 1188 196 46 39 chr2 7181471 7181751 -246074832 + AluJo SINE Alu 1 282 -30 3242 190 137 112 chr2 7181821 7182340 -246074243 + L1MC3 LINE L1 6566 7070 -715 263 294 20 10 chr2 7182340 7182442 -246074141 + MLT1F1 LTR MaLR 29 131 -436 3242 190 137 112 chr2 7182442 7183000 -246073583 + L1MC3 LINE L1 7070 7774 -11 267 365 19 0 chr2 7183005 7183112 -246073471 - L2 LINE L2 -15 3298 3190 417 330 57 24 chr2 7183616 7183828 -246072755 + MIR SINE MIR 14 232 -30 477 0 0 0 chr2 7184039 7184092 -246072491 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 185 0 40 0 chr2 7184091 7184116 -246072467 + (TAA)n Simple_repeat Simple_repeat 2 27 0 * 1301 268 49 12 chr2 7184438 7184848 -246071735 + LTR16C LTR ERVL 67 491 0 3366 187 101 41 chr2 7185067 7185916 -246070667 - L1MA4 LINE L1 -1 6299 5400 1084 103 5 19 chr2 7187194 7187684 -246068899 + (TCCA)n Simple_repeat Simple_repeat 1 666 0 289 316 129 84 chr2 7188637 7188862 -246067721 - L2 LINE L2 -8 3264 3030 261 353 181 23 chr2 7189010 7189143 -246067440 - L2 LINE L2 -8 3264 3111 388 398 25 0 chr2 7189615 7189776 -246066807 - L2 LINE L2 -1 3271 3107 637 91 20 0 chr2 7191332 7191431 -246065152 - L1MA10 LINE L1 0 6334 6234 1695 161 0 28 chr2 7193639 7193953 -246062630 - AluJb SINE Alu 0 307 2 186 292 31 0 chr2 7194414 7194479 -246062104 - MIR SINE MIR -70 192 126 1721 184 5 89 chr2 7196894 7197083 -246059500 + MER57A LTR ERV1 1 134 -269 2071 143 23 52 chr2 7197083 7197468 -246059115 + THE1C LTR MaLR 1 374 -1 1721 184 5 89 chr2 7197468 7197718 -246058865 + MER57A LTR ERV1 134 403 0 242 240 125 87 chr2 7198564 7198886 -246057697 + L1ME4a LINE L1 5584 5927 -194 207 0 0 0 chr2 7198886 7198909 -246057674 + (TG)n Simple_repeat Simple_repeat 2 24 0 242 240 125 87 chr2 7198909 7199002 -246057581 + L1ME4a LINE L1 5927 6015 -106 22 35 0 0 chr2 7199059 7199088 -246057495 + AT_rich Low_complexity Low_complexity 1 29 0 393 276 91 73 chr2 7199170 7199458 -246057125 - L1MEd LINE L1 -4867 1252 971 1596 180 16 32 chr2 7199458 7199774 -246056809 - AluJo SINE Alu -1 311 1 393 276 91 73 chr2 7199774 7200047 -246056536 - L1MEd LINE L1 -5148 971 681 1807 236 31 8 chr2 7200695 7201080 -246055503 + MSTD LTR MaLR 1 394 -2 453 293 47 22 chr2 7201122 7201354 -246055229 + L1MC/D LINE L1 5584 5821 -1987 767 301 0 0 chr2 7201355 7201558 -246055025 + MER63A DNA MER1_type 1 203 -7 1625 147 0 96 chr2 7201688 7202002 -246054581 + AluJo SINE Alu 3 286 -26 24 32 0 0 chr2 7202270 7202301 -246054282 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 7202576 7202604 -246053979 + AT_rich Low_complexity Low_complexity 1 28 0 1613 202 71 49 chr2 7202610 7202976 -246053607 + MLT1A2 LTR MaLR 1 374 0 628 49 24 0 chr2 7205030 7205112 -246051471 - L1PA10 LINE L1 -8 6160 6077 242 35 0 0 chr2 7205113 7205142 -246051441 + L1PA10 LINE L1 6020 6048 -120 5657 273 47 66 chr2 7205450 7206533 -246050050 - L2 LINE L2 -405 2909 1806 315 0 0 0 chr2 7206533 7206568 -246050015 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1509 173 24 12 chr2 7206571 7206820 -246049763 - AluJb SINE Alu -30 282 31 564 195 0 0 chr2 7206820 7206902 -246049681 - AluJ/FLAM SINE Alu -228 84 3 5657 273 47 66 chr2 7206902 7206977 -246049606 - L2 LINE L2 -1509 1805 1730 1952 126 31 0 chr2 7206977 7207263 -246049320 + AluSx SINE Alu 17 311 -1 5657 273 47 66 chr2 7207263 7208361 -246048222 - L2 LINE L2 -1584 1730 612 223 385 62 26 chr2 7208524 7208716 -246047867 + L2 LINE L2 2652 2850 -464 326 303 92 17 chr2 7209473 7209592 -246046991 - MIR SINE MIR -60 148 21 180 0 0 0 chr2 7210577 7210597 -246045986 + (A)n Simple_repeat Simple_repeat 1 20 0 902 107 61 0 chr2 7211208 7211339 -246045244 + MER85 DNA T2_type 1 139 0 272 311 145 25 chr2 7212512 7212893 -246043690 + MLT1J LTR MaLR 35 509 -2 2133 171 97 13 chr2 7213285 7213678 -246042905 + MSTB LTR MaLR 1 426 0 1818 144 3 56 chr2 7213844 7214164 -246042419 + AluJb SINE Alu 1 303 -9 249 108 0 0 chr2 7214164 7214201 -246042382 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 385 15 22 chr2 7214337 7214472 -246042111 - L2 LINE L2 -534 2780 2647 181 216 54 0 chr2 7215600 7215637 -246040946 + L2 LINE L2 3182 3220 -93 1820 214 23 3 chr2 7216674 7217025 -246039558 - MLT1A1 LTR MaLR -1 364 7 1634 174 59 3 chr2 7217778 7218066 -246038517 - AluJb SINE Alu -8 304 1 222 190 17 17 chr2 7218107 7218165 -246038418 + A-rich Low_complexity Low_complexity 5 62 0 533 277 34 0 chr2 7218176 7218324 -246038259 - MIR SINE MIR -108 154 2 240 143 0 0 chr2 7219059 7219101 -246037482 + (TA)n Simple_repeat Simple_repeat 1 42 0 56 16 0 0 chr2 7219148 7219211 -246037372 + AT_rich Low_complexity Low_complexity 1 63 0 1436 182 0 0 chr2 7219312 7219559 -246037024 - MER57A LTR ERV1 0 403 157 1872 149 10 7 chr2 7221955 7222243 -246034340 - AluSx SINE Alu -23 289 1 187 241 74 19 chr2 7222367 7222421 -246034162 + L2 LINE L2 3195 3251 -21 191 330 80 18 chr2 7222444 7222556 -246034027 - L2 LINE L2 -6 3307 3189 2153 135 0 0 chr2 7222841 7223138 -246033445 - AluSx SINE Alu -15 297 1 360 316 0 0 chr2 7223173 7223268 -246033315 + L2 LINE L2 3174 3268 -4 1975 193 51 22 chr2 7223332 7223746 -246032837 + MSTB LTR MaLR 1 426 0 308 159 0 16 chr2 7224536 7224599 -246031984 + (TG)n Simple_repeat Simple_repeat 2 63 0 268 278 144 0 chr2 7226541 7226638 -246029945 - MIR SINE MIR -75 187 77 1651 154 7 54 chr2 7226812 7227110 -246029473 + AluJo SINE Alu 5 288 -24 237 65 0 0 chr2 7227271 7227302 -246029281 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 7227323 7227344 -246029239 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 576 29 0 0 chr2 7227343 7227413 -246029170 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 192 40 0 0 chr2 7227436 7227461 -246029122 + (GA)n Simple_repeat Simple_repeat 2 26 0 22 35 0 0 chr2 7227505 7227534 -246029049 + AT_rich Low_complexity Low_complexity 1 29 0 234 282 26 13 chr2 7228207 7228285 -246028298 + MIR3 SINE MIR 100 178 -30 22 0 0 0 chr2 7228571 7228593 -246027990 + AT_rich Low_complexity Low_complexity 1 22 0 2281 96 0 7 chr2 7229535 7229836 -246026747 + AluY SINE Alu 1 299 -12 21 0 0 0 chr2 7231984 7232005 -246024578 + AT_rich Low_complexity Low_complexity 1 21 0 2270 118 0 0 chr2 7232162 7232466 -246024117 + AluSx SINE Alu 2 305 -7 207 125 0 0 chr2 7233228 7233268 -246023315 + (T)n Simple_repeat Simple_repeat 1 40 0 22 43 0 21 chr2 7233277 7233307 -246023276 + AT_rich Low_complexity Low_complexity 1 31 -15 2945 102 67 9 chr2 7233307 7233756 -246022827 - L1PB1 LINE L1 -3 6148 5674 22 43 0 21 chr2 7233756 7233772 -246022811 + AT_rich Low_complexity Low_complexity 31 46 0 2754 30 0 0 chr2 7233772 7234075 -246022508 - L1PA5 LINE L1 -11 6143 5841 235 293 57 19 chr2 7234619 7234725 -246021858 - L1MDa LINE L1 -4643 1897 1788 30 0 0 0 chr2 7234930 7234960 -246021623 + AT_rich Low_complexity Low_complexity 1 30 0 2901 194 55 5 chr2 7235768 7236346 -246020237 + MER82 DNA MER2_type 47 653 0 245 336 50 29 chr2 7236370 7236510 -246020073 + MIR3 SINE MIR 16 158 -50 7274 160 11 27 chr2 7236614 7237296 -246019287 - HSMAR2 DNA Mariner -2 1300 648 2113 128 3 0 chr2 7237296 7237594 -246018989 + AluSc SINE Alu 10 308 -1 7274 160 11 27 chr2 7237594 7238223 -246018360 - HSMAR2 DNA Mariner -654 648 10 312 227 40 13 chr2 7238713 7238788 -246017795 + MER5A DNA MER1_type 30 106 -83 402 312 26 21 chr2 7239405 7239594 -246016989 - MIR SINE MIR 0 262 73 442 286 23 15 chr2 7240648 7240781 -246015802 + MIR3 SINE MIR 75 208 0 317 304 62 0 chr2 7242146 7242258 -246014325 + MER34 LTR ERV1 1 119 -423 * 1477 265 78 13 chr2 7242247 7242711 -246013872 + LTR48B LTR ERV1 151 644 0 2289 175 144 45 chr2 7243114 7243692 -246012891 + LTR24C LTR ERV1 1 635 0 204 213 43 0 chr2 7244525 7244572 -246012011 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 241 251 5 0 chr2 7245148 7245228 -246011355 + MIR SINE MIR 97 178 -30 1678 190 14 3 chr2 7245576 7245866 -246010717 - AluJo SINE Alu -18 294 2 218 312 80 14 chr2 7246274 7246412 -246010171 + MIR SINE MIR 70 216 -46 215 288 68 0 chr2 7246516 7246589 -246009994 - MIR SINE MIR -95 167 90 13096 134 28 122 chr2 7246887 7249649 -246006934 + L1PA15-16 LINE L1 2 2502 -4347 1061 150 6 12 chr2 7249695 7249868 -246006715 + L1PA16 LINE L1 5993 6164 -2 1695 229 128 18 chr2 7250254 7250482 -246006101 - MLT1D LTR MaLR -1 504 303 2279 104 13 0 chr2 7250482 7250781 -246005802 - AluSx SINE Alu -9 303 1 1695 229 128 18 chr2 7250781 7251006 -246005577 - MLT1D LTR MaLR -202 303 1 205 153 17 34 chr2 7251711 7251770 -246004813 + CT-rich Low_complexity Low_complexity 2 59 0 202 352 44 0 chr2 7251837 7251928 -246004655 - L2 LINE L2 -1001 2313 2219 237 139 0 0 chr2 7251977 7252020 -246004563 + (CA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 7252907 7252929 -246003654 + AT_rich Low_complexity Low_complexity 1 22 0 210 362 38 0 chr2 7254191 7254296 -246002287 + MIR SINE MIR 33 141 -67 827 269 0 0 chr2 7254778 7254971 -246001612 - MER58A DNA MER1_type -5 219 27 196 241 68 33 chr2 7256869 7256960 -245999623 + MIR SINE MIR 28 126 -82 1623 99 86 65 chr2 7256960 7257252 -245999331 - AluSq SINE Alu -6 307 10 196 241 68 33 chr2 7257252 7257270 -245999313 + MIR SINE MIR 126 142 -66 266 361 38 19 chr2 7257668 7257826 -245998757 + MIR SINE MIR 54 214 -48 267 250 0 0 chr2 7258344 7258444 -245998139 + (TG)n Simple_repeat Simple_repeat 1 100 0 439 238 129 41 chr2 7259206 7259423 -245997160 - MIR SINE MIR -11 251 22 214 266 78 104 chr2 7260054 7260208 -245996375 - MER5B DNA MER1_type -35 154 5 1838 178 0 3 chr2 7260314 7260607 -245995976 + AluJb SINE Alu 3 294 -18 369 215 65 9 chr2 7260784 7260903 -245995680 - MLT1I LTR MaLR 0 450 281 236 328 25 17 chr2 7260990 7261109 -245995474 - MLT1I LTR MaLR -289 260 141 627 157 6 93 chr2 7261578 7261705 -245994878 + L1MC2 LINE L1 6188 6298 -46 2325 115 0 0 chr2 7261705 7262009 -245994574 - AluSx SINE Alu -8 304 1 627 157 6 93 chr2 7262009 7262053 -245994530 + L1MC2 LINE L1 6298 6344 0 * 1893 248 148 58 chr2 7262049 7262955 -245993628 + L1MC4 LINE L1 6914 7918 -124 333 0 0 0 chr2 7262955 7262992 -245993591 + (CA)n Simple_repeat Simple_repeat 2 38 0 1893 248 148 58 chr2 7262992 7263075 -245993508 + L1MC4 LINE L1 7918 7992 -50 2108 130 0 0 chr2 7264110 7264410 -245992173 - AluSc SINE Alu -9 300 1 1882 233 137 37 chr2 7265793 7266445 -245990138 - L1ME1 LINE L1 -18 6148 5432 1736 188 3 10 chr2 7266640 7266944 -245989639 + AluJo SINE Alu 1 302 -10 2144 190 128 0 chr2 7267171 7267593 -245988990 + MLT2B2 LTR ERVL 1 476 -39 576 36 58 29 chr2 7267593 7267730 -245988853 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 356 100 50 20 chr2 7267742 7267842 -245988741 + (TCTA)n Simple_repeat Simple_repeat 3 105 0 22 0 0 0 chr2 7267928 7267950 -245988633 + AT_rich Low_complexity Low_complexity 1 22 0 2286 123 0 0 chr2 7268382 7268690 -245987893 - AluSg SINE Alu -2 308 1 24 32 0 0 chr2 7269251 7269282 -245987301 + AT_rich Low_complexity Low_complexity 1 31 0 287 113 19 0 chr2 7269605 7269658 -245986925 + CT-rich Low_complexity Low_complexity 1 54 0 390 57 0 0 chr2 7269924 7269977 -245986606 + (TG)n Simple_repeat Simple_repeat 2 54 0 613 287 22 67 chr2 7270866 7271134 -245985449 + MLT1I LTR MaLR 95 350 -59 851 239 29 19 chr2 7271423 7271632 -245984951 + MER58A DNA MER1_type 7 217 -7 248 344 11 11 chr2 7272985 7273075 -245983508 - L2 LINE L2 -78 3194 3105 2212 111 0 3 chr2 7274164 7274461 -245982122 + AluSg SINE Alu 11 306 -4 271 196 71 131 chr2 7274509 7274623 -245981960 - MIR3 SINE MIR -21 187 85 667 247 17 11 chr2 7274623 7274797 -245981786 - MER5B DNA MER1_type -3 175 1 271 196 71 131 chr2 7274797 7274850 -245981733 - MIR3 SINE MIR -123 85 30 1314 170 50 57 chr2 7275720 7275866 -245980717 + AluJo SINE Alu 1 146 -166 2473 57 3 3 chr2 7275866 7276164 -245980419 + AluY SINE Alu 1 298 -13 1314 170 50 57 chr2 7276164 7276300 -245980283 + AluJo SINE Alu 146 281 -31 1729 138 0 8 chr2 7276699 7276986 -245979597 + AluSg SINE Alu 29 313 0 1614 169 59 72 chr2 7277192 7277582 -245979001 - MLT1B LTR MaLR 0 390 6 2138 118 3 0 chr2 7278006 7278295 -245978288 + AluSx SINE Alu 5 294 -18 2117 111 0 3 chr2 7279129 7279427 -245977156 + AluSg SINE Alu 1 297 -13 397 193 67 8 chr2 7279465 7279584 -245976999 + L1MCa LINE L1 1293 1418 -5008 204 143 0 24 chr2 7279584 7279626 -245976957 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 7279776 7279823 -245976760 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr2 7279848 7279886 -245976697 + AT_rich Low_complexity Low_complexity 1 38 0 581 194 8 23 chr2 7280114 7280243 -245976340 + MIR SINE MIR 105 231 -31 27 29 0 0 chr2 7282015 7282049 -245974534 + AT_rich Low_complexity Low_complexity 1 34 0 437 337 76 52 chr2 7283468 7283756 -245972827 - L2 LINE L2 0 3272 2978 323 273 27 9 chr2 7283829 7283939 -245972644 - MIR SINE MIR 0 262 151 349 359 132 23 chr2 7283940 7284160 -245972423 + L3 LINE CR1 1328 1571 -6 2121 153 42 30 chr2 7284631 7285179 -245971404 - MLT2A2 LTR ERVL 0 554 1 14805 90 13 3 chr2 7285179 7287266 -245969317 - HERVL-A2 LTR ERVL 0 5654 3548 333 199 35 106 chr2 7288021 7288162 -245968421 + MER104 DNA Tc2 1 131 -49 192 356 75 26 chr2 7289013 7289280 -245967303 + L2 LINE L2 921 1200 -2114 307 368 73 51 chr2 7289836 7290206 -245966377 + L2 LINE L2 2895 3272 0 1649 247 63 33 chr2 7291118 7292272 -245964311 + L1ME1 LINE L1 4522 5716 -448 318 217 132 42 chr2 7292287 7292485 -245964098 + L1ME1 LINE L1 5965 6334 0 231 340 64 14 chr2 7292604 7292745 -245963838 + L2 LINE L2 3162 3309 -4 3791 189 22 28 chr2 7294040 7295375 -245961208 - L1MB3 LINE L1 -41 6142 4819 2021 212 40 16 chr2 7295578 7296022 -245960561 + MLT2B2 LTR ERVL 1 455 -60 951 57 19 19 chr2 7296022 7296181 -245960402 + (TCTA)n Simple_repeat Simple_repeat 2 160 0 341 335 40 50 chr2 7297095 7297295 -245959288 + MIR SINE MIR 47 244 -18 192 158 0 0 chr2 7297862 7297900 -245958683 + T-rich Low_complexity Low_complexity 1 38 0 2034 194 27 57 chr2 7301284 7301869 -245954714 - L1MC1 LINE L1 -75 6258 5739 1197 53 0 0 chr2 7301869 7302019 -245954564 - L1PA3 LINE L1 -3 6152 6003 2034 194 27 57 chr2 7302019 7302327 -245954256 - L1MC1 LINE L1 -594 5739 5423 207 283 0 0 chr2 7302775 7302821 -245953762 + (TTG)n Simple_repeat Simple_repeat 2 47 0 257 328 59 8 chr2 7302858 7302977 -245953606 + MIR SINE MIR 101 225 -37 366 330 25 0 chr2 7303330 7303533 -245953050 - MLT1L LTR MaLR 0 615 408 22 0 0 0 chr2 7303717 7303739 -245952844 + AT_rich Low_complexity Low_complexity 1 22 0 34 79 0 0 chr2 7303856 7303932 -245952651 + AT_rich Low_complexity Low_complexity 1 76 0 3277 197 48 17 chr2 7304302 7305070 -245951513 + L1MC1 LINE L1 5542 6333 0 2135 111 7 10 chr2 7305403 7305700 -245950883 - AluSq SINE Alu -17 296 1 413 281 65 41 chr2 7305934 7306180 -245950403 - L1MEd LINE L1 -3679 2450 2199 211 122 41 0 chr2 7306305 7306354 -245950229 + (TA)n Simple_repeat Simple_repeat 1 51 0 630 338 62 48 chr2 7306692 7307174 -245949409 - HAL1 LINE L1 -761 1746 1258 388 309 67 49 chr2 7307213 7307498 -245949085 - L1MEd LINE L1 -5046 1073 784 180 0 0 0 chr2 7308184 7308204 -245948379 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 378 252 24 8 chr2 7308410 7308533 -245948050 + Charlie8 DNA MER1_type 79 203 -2214 5149 20 0 0 chr2 7308990 7309575 -245947008 - L1PA3 LINE L1 -5 6150 5566 250 317 111 20 chr2 7311219 7311441 -245945142 + MIR3 SINE MIR 4 251 -11 609 234 19 6 chr2 7311871 7312029 -245944554 - MER58B DNA MER1_type 0 341 182 756 226 34 15 chr2 7312031 7312235 -245944348 + MER20 DNA MER1_type 3 210 -9 529 167 123 14 chr2 7312236 7312374 -245944209 - MER58B DNA MER1_type -152 189 37 37 39 0 0 chr2 7315811 7315862 -245940721 + AT_rich Low_complexity Low_complexity 1 51 0 262 280 167 15 chr2 7316112 7316244 -245940339 + MIR SINE MIR 1 152 -110 2180 146 34 3 chr2 7316697 7317081 -245939502 + MSTA LTR MaLR 33 428 0 245 208 0 38 chr2 7318364 7318417 -245938166 - MER58A DNA MER1_type 0 224 174 1412 158 50 68 chr2 7318425 7318528 -245938055 + AluJb SINE Alu 11 114 -199 2747 71 3 3 chr2 7318528 7318881 -245937702 + THE1A LTR MaLR 3 355 0 1412 158 50 68 chr2 7318881 7319085 -245937498 + AluJb SINE Alu 114 313 0 578 236 54 7 chr2 7319093 7319241 -245937342 - MER58A DNA MER1_type -33 191 37 1907 172 9 78 chr2 7319590 7319837 -245936746 + MSTD LTR MaLR 1 208 -188 420 55 0 0 chr2 7319837 7319892 -245936691 + (CA)n Simple_repeat Simple_repeat 1 55 0 1907 172 9 78 chr2 7319892 7320069 -245936514 + MSTD LTR MaLR 208 396 0 2391 120 13 13 chr2 7320391 7320765 -245935818 - THE1C LTR MaLR -1 374 1 1409 219 22 35 chr2 7320765 7321128 -245935455 - MLT1A1 LTR MaLR -4 361 1 269 323 121 0 chr2 7321982 7322081 -245934502 + L3 LINE CR1 1373 1483 -94 631 245 41 41 chr2 7323064 7323260 -245933323 + MIR SINE MIR 46 241 -21 207 250 0 0 chr2 7323277 7323321 -245933262 - L2 LINE L2 -5 3308 3265 521 165 0 10 chr2 7323609 7323712 -245932871 + GA-rich Low_complexity Low_complexity 3 104 0 302 192 13 51 chr2 7325042 7325120 -245931463 + L1MC4 LINE L1 6615 6689 -1353 444 244 88 40 chr2 7325190 7325440 -245931143 - HAL1b LINE L1 -258 1090 829 251 347 0 24 chr2 7325442 7325566 -245931017 - L2 LINE L2 -942 2372 2252 30 69 0 0 chr2 7326024 7326082 -245930501 + AT_rich Low_complexity Low_complexity 1 58 0 5869 19 17 1 chr2 7326207 7326855 -245929728 - SVA Other Other -3 1383 726 2240 120 11 14 chr2 7326879 7327246 -245929337 - L1MA2 LINE L1 0 6304 5939 1126 252 132 12 chr2 7327744 7328161 -245928422 - MLT1C LTR MaLR 0 467 1 2132 116 34 45 chr2 7328780 7328940 -245927643 + THE1C LTR MaLR 1 161 -214 1977 153 7 0 chr2 7328940 7329228 -245927355 - AluSq SINE Alu -23 290 1 2132 116 34 45 chr2 7329228 7329446 -245927137 + THE1C LTR MaLR 161 375 0 26 30 0 0 chr2 7329554 7329587 -245926996 + AT_rich Low_complexity Low_complexity 1 33 0 2195 110 7 0 chr2 7331303 7331427 -245925156 + AluSg SINE Alu 1 123 -187 462 18 0 0 chr2 7331427 7331482 -245925101 + (CA)n Simple_repeat Simple_repeat 2 56 0 2195 110 7 0 chr2 7331482 7331665 -245924918 + AluSg SINE Alu 123 310 0 191 297 55 22 chr2 7331985 7332076 -245924507 + MIR SINE MIR 116 209 -53 2133 111 7 3 chr2 7332119 7332407 -245924176 - AluSx SINE Alu -23 289 1 776 221 94 35 chr2 7333518 7333800 -245922783 - MER33 DNA MER1_type -30 294 1 397 360 111 5 chr2 7333927 7334232 -245922351 - L2 LINE L2 -270 3002 2667 189 154 0 0 chr2 7334376 7334415 -245922168 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 393 288 156 15 chr2 7334471 7334676 -245921907 - MIR SINE MIR -27 235 2 199 274 71 0 chr2 7334885 7334969 -245921614 - MIR SINE MIR -112 150 61 22 0 0 0 chr2 7335178 7335200 -245921383 + AT_rich Low_complexity Low_complexity 1 22 0 334 255 29 51 chr2 7335391 7335569 -245921014 + MIR SINE MIR 19 192 -59 207 293 109 23 chr2 7335738 7335912 -245920671 - MIR SINE MIR -55 207 19 488 254 48 12 chr2 7336573 7336738 -245919845 + MIR SINE MIR 28 198 -64 998 205 89 13 chr2 7340399 7340712 -245915871 - MER33 DNA MER1_type -7 317 1 409 201 82 50 chr2 7341700 7341828 -245914755 - MER53 DNA DNA -25 164 29 1834 100 37 0 chr2 7341828 7342069 -245914514 - AluSx SINE Alu -20 292 43 409 201 82 50 chr2 7342069 7342099 -245914484 - MER53 DNA DNA -160 29 1 192 357 43 32 chr2 7342409 7342705 -245913878 - L2 LINE L2 -230 3083 2778 1950 169 28 11 chr2 7343164 7343403 -245913180 - MLT1B LTR MaLR 0 390 141 2103 113 0 61 chr2 7343403 7343729 -245912854 + AluSp SINE Alu 1 306 -7 1950 169 28 11 chr2 7343729 7343851 -245912732 - MLT1B LTR MaLR -249 141 23 1522 214 218 4 chr2 7346789 7347279 -245909304 - L1MB8 LINE L1 -1 6177 5583 234 0 0 0 chr2 7347626 7347652 -245908931 + (T)n Simple_repeat Simple_repeat 1 26 0 285 215 83 50 chr2 7348438 7348559 -245908024 - MER96B DNA MER1_type? -261 156 32 205 225 0 0 chr2 7348589 7348629 -245907954 + L2 LINE L2 3266 3305 -8 262 293 41 23 chr2 7348971 7349109 -245907474 + MIR SINE MIR 5 143 -68 197 385 0 10 chr2 7350624 7350728 -245905855 - MIR SINE MIR -114 148 46 240 35 0 0 chr2 7352298 7352327 -245904256 + (CA)n Simple_repeat Simple_repeat 2 30 0 1685 146 55 78 chr2 7352679 7353063 -245903520 + THE1C LTR MaLR 1 375 0 360 301 30 15 chr2 7353091 7353224 -245903359 - MIR SINE MIR -71 191 57 372 66 279 0 chr2 7353809 7353870 -245902713 + MADE1 DNA Mariner 3 80 0 2220 98 24 0 chr2 7354026 7354323 -245902260 + AluSg SINE Alu 1 304 -6 950 199 0 31 chr2 7354361 7354557 -245902026 + AluJo SINE Alu 120 309 -3 181 388 15 0 chr2 7355236 7355303 -245901280 + MIR SINE MIR 21 88 -120 995 305 96 43 chr2 7355655 7355690 -245900893 + L1ME3A LINE L1 2884 2916 -3230 2288 113 3 3 chr2 7355690 7356000 -245900583 + AluY SINE Alu 1 310 -1 995 305 96 43 chr2 7356000 7357344 -245899239 + L1ME3A LINE L1 2916 4335 -1811 22 35 0 0 chr2 7357426 7357455 -245899128 + AT_rich Low_complexity Low_complexity 1 29 0 324 276 111 72 chr2 7357801 7358080 -245898503 + L1ME3A LINE L1 5681 5970 -200 756 20 29 0 chr2 7358272 7358374 -245898209 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 199 349 56 8 chr2 7361153 7361279 -245895304 + L2 LINE L2 3102 3233 -39 398 269 48 21 chr2 7361988 7362133 -245894450 + MIR SINE MIR 102 250 -12 663 149 15 15 chr2 7362336 7362470 -245894113 + L1MB8 LINE L1 6044 6177 -1 216 309 0 12 chr2 7363671 7363752 -245892831 + MIR SINE MIR 177 256 -6 24 0 0 0 chr2 7367855 7367879 -245888704 + AT_rich Low_complexity Low_complexity 1 24 0 1519 234 45 52 chr2 7368017 7368482 -245888101 + MLT1C LTR MaLR 6 467 0 600 40 0 0 chr2 7368866 7368941 -245887642 + (TGG)n Simple_repeat Simple_repeat 2 76 0 959 265 71 58 chr2 7369678 7370006 -245886577 + MER77 LTR ERV1 281 673 -6 1161 204 27 108 chr2 7370434 7370841 -245885742 - MLT1A2 LTR MaLR 0 374 1 624 281 33 54 chr2 7372160 7372402 -245884181 + MIR SINE MIR 16 252 -10 3604 174 73 4 chr2 7372943 7373627 -245882956 + L1MB2 LINE L1 5439 6169 -2 555 191 19 0 chr2 7374723 7374885 -245881698 + GA-rich Low_complexity Low_complexity 2 166 0 352 275 74 11 chr2 7375314 7375384 -245881199 - MIR SINE MIR -16 246 182 2066 176 100 55 chr2 7375384 7375914 -245880669 + MLT2B3 LTR ERVL 1 554 0 352 275 74 11 chr2 7375914 7376032 -245880551 - MIR SINE MIR -80 182 46 2169 132 90 25 chr2 7376202 7376604 -245879979 + MSTA LTR MaLR 1 428 0 184 225 0 127 chr2 7377194 7377218 -245879365 - MER5A DNA MER1_type 0 189 164 2712 86 11 0 chr2 7377218 7377569 -245879014 - THE1A LTR MaLR 0 355 1 11565 96 5 10 chr2 7377569 7379157 -245877426 - THE1A-int LTR MaLR 0 1580 1 2684 91 11 0 chr2 7379157 7379508 -245877075 - THE1A LTR MaLR 0 355 1 184 225 0 127 chr2 7379508 7379552 -245877031 - MER5A DNA MER1_type -22 167 128 183 320 62 23 chr2 7379581 7379709 -245876874 + MER5A DNA MER1_type 55 187 -2 * 684 178 8 0 chr2 7379596 7379725 -245876858 - MER5A DNA MER1_type -59 130 1 395 242 6 19 chr2 7380049 7380206 -245876377 + (TA)n Simple_repeat Simple_repeat 1 155 0 180 353 118 0 chr2 7380704 7380823 -245875760 - L2 LINE L2 0 3313 3181 405 267 17 9 chr2 7381151 7381267 -245875316 - MER5A DNA MER1_type -69 120 4 362 255 101 13 chr2 7381867 7382016 -245874567 - LTR33 LTR ERVL -5 516 355 270 254 0 14 chr2 7383092 7383163 -245873420 + MIR SINE MIR 22 91 -117 1592 243 200 20 chr2 7383462 7384006 -245872577 - MLT1E1 LTR MaLR 0 654 13 5329 118 22 4 chr2 7384888 7385553 -245871030 - L1PA13 LINE L1 0 6163 5479 195 42 0 0 chr2 7385553 7385577 -245871006 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5329 118 22 4 chr2 7385577 7385715 -245870868 - L1PA13 LINE L1 -684 5479 5345 22 56 0 0 chr2 7386456 7386492 -245870091 + AT_rich Low_complexity Low_complexity 1 36 0 401 375 48 39 chr2 7386535 7386643 -245869940 - L2 LINE L2 -664 2650 2545 2223 107 7 3 chr2 7386643 7386952 -245869631 - AluSq SINE Alu -3 310 1 401 375 48 39 chr2 7386952 7387256 -245869327 - L2 LINE L2 -769 2545 2234 206 271 43 107 chr2 7387657 7387797 -245868786 + L2 LINE L2 2710 2840 -474 212 278 72 31 chr2 7388033 7388130 -245868453 - L2 LINE L2 -641 2673 2573 445 264 0 16 chr2 7388131 7388256 -245868327 - LTR67 LTR ERVL -2 555 433 189 322 252 9 chr2 7389103 7389218 -245867365 + MIR3 SINE MIR 46 188 -20 22 35 0 0 chr2 7389447 7389476 -245867107 + AT_rich Low_complexity Low_complexity 1 29 0 213 65 0 0 chr2 7390796 7390827 -245865756 + (CA)n Simple_repeat Simple_repeat 2 32 0 449 204 25 0 chr2 7391475 7391637 -245864946 + GA-rich Low_complexity Low_complexity 2 167 0 487 348 14 9 chr2 7393976 7394186 -245862397 + MIR SINE MIR 31 241 -21 1189 132 0 0 chr2 7394460 7394627 -245861956 + AluSg/x SINE Alu 133 299 -13 216 243 0 57 chr2 7396072 7396142 -245860441 + MIR SINE MIR 108 173 -89 300 262 138 28 chr2 7396452 7396597 -245859986 - MIR SINE MIR -70 192 32 208 284 27 54 chr2 7397907 7397981 -245858602 - MIR SINE MIR -59 149 78 222 298 18 0 chr2 7399453 7399510 -245857073 - MIR SINE MIR -59 149 92 188 292 106 18 chr2 7399948 7400061 -245856522 + MIR SINE MIR 85 207 -55 8057 213 48 37 chr2 7400435 7404290 -245852293 - L1MC1 LINE L1 0 6613 2801 2590 21 10 0 chr2 7404290 7404579 -245852004 - L1PA4 LINE L1 0 6155 5864 8057 213 48 37 chr2 7404579 7406089 -245850494 - L1MC1 LINE L1 -3812 2801 883 1702 197 43 70 chr2 7406089 7406530 -245850053 + MSTB1 LTR MaLR 4 432 0 8057 213 48 37 chr2 7406530 7407394 -245849189 - L1MC1 LINE L1 -5730 883 30 335 305 30 15 chr2 7408260 7408391 -245848192 - MIR SINE MIR -81 181 49 518 271 45 40 chr2 7410569 7410816 -245845767 + LTR16A LTR ERVL 203 450 0 183 331 96 45 chr2 7411392 7411570 -245845013 - L2 LINE L2 -512 2802 2616 198 0 0 0 chr2 7411981 7412003 -245844580 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 1266 184 53 26 chr2 7412350 7412616 -245843967 + AluJb SINE Alu 1 273 -39 316 325 88 18 chr2 7413103 7413217 -245843366 - MER5B DNA MER1_type -3 175 54 241 299 37 110 chr2 7413126 7413290 -245843293 + MER5A DNA MER1_type 38 189 0 * 2356 114 0 0 chr2 7413748 7414054 -245842529 + AluSp SINE Alu 1 306 -7 348 167 0 0 chr2 7414099 7414171 -245842412 + GA-rich Low_complexity Low_complexity 2 73 0 617 250 43 6 chr2 7414173 7414337 -245842246 + MIR SINE MIR 88 257 -5 300 329 71 52 chr2 7414369 7414834 -245841749 - L1MC4a LINE L1 -1914 5894 5421 227 173 19 0 chr2 7415071 7415123 -245841460 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 245 298 25 0 chr2 7415145 7415266 -245841317 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 243 256 61 24 chr2 7415434 7415516 -245841067 + MIR SINE MIR 62 146 -62 258 295 40 0 chr2 7415615 7415714 -245840869 - MIR SINE MIR -88 120 47 22 35 0 0 chr2 7415952 7415981 -245840602 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 7417299 7417320 -245839263 + AT_rich Low_complexity Low_complexity 1 21 0 482 225 152 67 chr2 7417912 7418390 -245838193 + LTR50 LTR ERVL 9 605 -190 340 184 38 0 chr2 7418409 7418496 -245838087 + LTR50 LTR ERVL 435 795 0 647 262 50 54 chr2 7421663 7421961 -245834622 + MER102b DNA MER1_type 37 333 -8 305 222 69 56 chr2 7422253 7422397 -245834186 + L1M4 LINE L1 4129 4274 -1872 283 302 167 49 chr2 7422411 7422809 -245833774 - L2 LINE L2 0 3313 2779 711 281 84 39 chr2 7422912 7423328 -245833255 + LTR16A LTR ERVL 7 441 -9 709 292 112 4 chr2 7423468 7423701 -245832882 - L2 LINE L2 -987 2327 2070 378 329 42 42 chr2 7423732 7424045 -245832538 + L1ME3A LINE L1 5635 5947 -223 1885 139 14 0 chr2 7424180 7424493 -245832090 - AluSx SINE Alu 0 317 1 473 338 29 10 chr2 7424720 7424924 -245831659 - MIR SINE MIR -24 238 31 223 265 60 0 chr2 7425298 7425381 -245831202 - MIR3 SINE MIR -21 187 100 579 267 28 17 chr2 7425418 7425594 -245830989 - MER5B DNA MER1_type 0 178 1 1330 202 5 5 chr2 7425989 7426212 -245830371 - MER58A DNA MER1_type 0 224 2 2025 124 0 0 chr2 7427342 7427659 -245828924 + AluSx SINE Alu 16 332 0 408 336 36 54 chr2 7427984 7428261 -245828322 - L2 LINE L2 0 3272 3001 297 362 52 24 chr2 7430409 7430619 -245825964 + MIR SINE MIR 47 262 0 1735 145 69 0 chr2 7430662 7430952 -245825631 + THE1B LTR MaLR 1 310 -54 674 124 0 0 chr2 7430952 7431049 -245825534 + AluY SINE Alu 213 309 -2 566 69 0 0 chr2 7431052 7431124 -245825459 + THE1B LTR MaLR 293 364 0 198 91 0 0 chr2 7431764 7431797 -245824786 + (CA)n Simple_repeat Simple_repeat 1 33 0 1986 110 43 17 chr2 7432482 7432815 -245823768 - AluSc SINE Alu 0 341 1 442 258 11 84 chr2 7432847 7433025 -245823558 - MLT1J1 LTR MaLR -236 210 46 32 57 0 0 chr2 7433790 7433843 -245822740 + AT_rich Low_complexity Low_complexity 1 53 0 2028 130 0 13 chr2 7434257 7434557 -245822026 - AluSx SINE Alu -16 296 1 378 354 99 9 chr2 7434928 7435151 -245821432 - MIR SINE MIR 0 262 20 693 254 138 27 chr2 7435413 7435673 -245820910 - LTR40a LTR ERVL -120 399 111 291 321 109 12 chr2 7435922 7436262 -245820321 + L1ME4a LINE L1 5542 5914 -207 2064 98 0 17 chr2 7436718 7437050 -245819533 - AluY SINE Alu 0 327 1 838 209 82 19 chr2 7440260 7440466 -245816117 + MER20 DNA MER1_type 1 219 0 293 280 41 113 chr2 7440467 7440671 -245815912 - MIR SINE MIR -40 168 11 258 175 16 63 chr2 7442176 7442239 -245814344 - L2 LINE L2 -7 3265 3206 389 352 6 0 chr2 7443278 7443457 -245813126 + (TG)n Simple_repeat Simple_repeat 1 180 0 209 272 136 47 chr2 7444459 7444672 -245811911 + MIR SINE MIR 3 234 -28 23 54 0 0 chr2 7444963 7445000 -245811583 + AT_rich Low_complexity Low_complexity 1 37 0 514 211 0 10 chr2 7445133 7445237 -245811346 + MER63 DNA MER1_type 21 749 -87 1755 161 10 3 chr2 7446517 7446808 -245809775 - AluSx SINE Alu -19 293 1 238 135 0 0 chr2 7446808 7446845 -245809738 + MSTB LTR MaLR 386 422 -4 259 267 57 19 chr2 7446895 7447000 -245809583 - L1ME LINE L1 -420 5701 5593 188 236 55 0 chr2 7447256 7447311 -245809272 + L2 LINE L2 3254 3311 -2 1741 197 120 63 chr2 7447643 7448201 -245808382 - L1MD2 LINE L1 -10 6743 6154 1877 214 17 74 chr2 7448276 7449039 -245807544 - L1MD2 LINE L1 -488 6148 5416 6549 240 88 40 chr2 7449404 7450417 -245806166 - L1MD2 LINE L1 -1383 5157 4194 6014 104 24 1 chr2 7450417 7451400 -245805183 + L1PA10 LINE L1 5158 6163 -5 6549 240 88 40 chr2 7451400 7453657 -245802926 - L1MD2 LINE L1 -2346 4194 1623 2411 66 7 0 chr2 7453657 7453958 -245802625 + AluY SINE Alu 1 303 -8 6549 240 88 40 chr2 7453958 7455053 -245801530 - L1MD2 LINE L1 -4917 1623 582 207 0 0 0 chr2 7455663 7455686 -245800897 + (T)n Simple_repeat Simple_repeat 1 23 0 28 48 0 0 chr2 7455976 7456018 -245800565 + AT_rich Low_complexity Low_complexity 1 42 0 2416 69 0 0 chr2 7456251 7456539 -245800044 - AluY SINE Alu -12 299 12 362 285 75 100 chr2 7456547 7456936 -245799647 - MLT1J LTR MaLR -132 379 1 920 105 0 0 chr2 7457256 7457389 -245799194 - L1MA3 LINE L1 0 6305 6173 2289 105 0 13 chr2 7459498 7459811 -245796772 + AluSg SINE Alu 1 309 -1 429 302 166 27 chr2 7460124 7460462 -245796121 + MLT1I LTR MaLR 19 403 -6 212 344 21 52 chr2 7460525 7460717 -245795866 - MIR SINE MIR -71 191 6 2459 77 0 0 chr2 7460917 7461228 -245795355 + AluY SINE Alu 1 311 0 2332 149 22 75 chr2 7464125 7464616 -245791967 + MLT1C LTR MaLR 1 465 -2 240 254 0 30 chr2 7466555 7466622 -245789961 + GA-rich Low_complexity Low_complexity 1 65 0 2190 105 3 35 chr2 7467073 7467388 -245789195 + AluSx SINE Alu 1 305 -7 323 236 25 70 chr2 7467781 7467938 -245788645 + L1M4 LINE L1 3077 3226 -2920 314 344 133 16 chr2 7467967 7468403 -245788180 + L1M4 LINE L1 4005 4491 -1655 257 255 213 58 chr2 7469331 7469519 -245787064 + L2 LINE L2 989 1205 -2109 10163 206 52 15 chr2 7469690 7470821 -245785762 + L1 LINE L1 2220 3308 -2838 1631 170 19 47 chr2 7470821 7471139 -245785444 + AluJb SINE Alu 1 309 -3 10163 206 52 15 chr2 7471139 7472506 -245784077 + L1 LINE L1 3308 4810 -1336 788 148 0 0 chr2 7472507 7472642 -245783941 + L1 LINE L1 3625 3759 -2387 227 205 0 0 chr2 7472661 7472700 -245783883 - AluJ/monomer SINE Alu -260 40 2 2959 220 59 7 chr2 7472702 7473444 -245783139 + L1MD2 LINE L1 5576 6356 -3 3211 264 105 27 chr2 7473473 7475378 -245781205 + L1ME1 LINE L1 2362 4410 -1805 2723 221 71 60 chr2 7475388 7475877 -245780706 + L1ME1 LINE L1 4805 5287 -948 195 42 0 0 chr2 7475877 7475901 -245780682 + (TA)n Simple_repeat Simple_repeat 2 25 0 2723 221 71 60 chr2 7475901 7476477 -245780106 + L1ME1 LINE L1 5287 5898 -337 2360 124 23 3 chr2 7476477 7476831 -245779752 + THE1B LTR MaLR 4 364 0 2723 221 71 60 chr2 7476831 7477165 -245779418 + L1ME1 LINE L1 5898 6227 -8 956 113 17 17 chr2 7477280 7477322 -245779261 + (GGAA)n Simple_repeat Simple_repeat 1 219 0 956 113 17 17 chr2 7477322 7477499 -245779084 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 961 129 23 4 chr2 7477759 7477982 -245778601 + GA-rich Low_complexity Low_complexity 3 228 0 531 103 19 37 chr2 7477982 7478089 -245778494 + (GAAAA)n Simple_repeat Simple_repeat 4 108 0 221 320 0 27 chr2 7479551 7479626 -245776957 + L2 LINE L2 3190 3262 -10 212 234 0 0 chr2 7479684 7479731 -245776852 + (TG)n Simple_repeat Simple_repeat 2 48 0 506 257 33 26 chr2 7480498 7480650 -245775933 - MIR SINE MIR -46 216 64 23 33 0 0 chr2 7480671 7480701 -245775882 + AT_rich Low_complexity Low_complexity 1 30 0 808 282 32 70 chr2 7481107 7481519 -245775064 + L2 LINE L2 2915 3310 -3 2747 208 10 32 chr2 7481732 7481913 -245774670 + L1MC1 LINE L1 4982 5166 -1167 1991 109 40 0 chr2 7481913 7482189 -245774394 + AluSx SINE Alu 13 299 -13 2747 208 10 32 chr2 7482189 7482831 -245773752 + L1MC1 LINE L1 5166 5916 -417 630 331 71 21 chr2 7482832 7483161 -245773422 - MLT1G LTR MaLR -289 301 1 1271 266 35 36 chr2 7483286 7483672 -245772911 + L1M4 LINE L1 2971 3357 -2789 2242 89 0 20 chr2 7483672 7483976 -245772607 - AluY SINE Alu -13 298 1 1271 266 35 36 chr2 7483976 7484220 -245772363 + L1M4 LINE L1 3357 3600 -2546 305 221 0 11 chr2 7484220 7484315 -245772268 + (TA)n Simple_repeat Simple_repeat 1 94 0 818 94 109 0 chr2 7484316 7484444 -245772139 + AluY SINE Alu 39 180 -131 30 83 0 0 chr2 7484444 7484480 -245772103 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 7484539 7484564 -245772019 + AT_rich Low_complexity Low_complexity 1 25 0 261 0 0 0 chr2 7484576 7484605 -245771978 + (TA)n Simple_repeat Simple_repeat 2 30 0 841 227 14 5 chr2 7484663 7484870 -245771713 - L1ME1 LINE L1 -223 5943 5735 959 126 0 0 chr2 7485021 7485172 -245771411 + L1PA15 LINE L1 6011 6161 -4 262 89 18 18 chr2 7486291 7486347 -245770236 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 275 250 29 0 chr2 7486547 7486615 -245769968 - MIR SINE MIR -108 154 85 2029 183 22 79 chr2 7487731 7488224 -245768359 - MLT1C LTR MaLR 0 467 3 220 236 0 18 chr2 7488660 7488715 -245767868 + A-rich Low_complexity Low_complexity 2 55 0 189 183 300 0 chr2 7489319 7489379 -245767204 + L2 LINE L2 3204 3281 -32 195 100 0 0 chr2 7489446 7489476 -245767107 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 2882 176 64 3 chr2 7489617 7490388 -245766195 + L1M2 LINE L1 4673 5496 -743 494 170 7 35 chr2 7490530 7490671 -245765912 + GA-rich Low_complexity Low_complexity 2 138 0 402 299 75 31 chr2 7492205 7492489 -245764094 - L1MDa LINE L1 -3854 2686 2395 2140 171 15 20 chr2 7492886 7493370 -245763213 - Tigger2 DNA MER2_type 0 2718 2 857 158 23 0 chr2 7493704 7493881 -245762702 - L1MA7 LINE L1 0 6291 6111 369 384 31 40 chr2 7494239 7494463 -245762120 - L1MDa LINE L1 -5476 1054 833 315 0 0 0 chr2 7494806 7494841 -245761742 + (CA)n Simple_repeat Simple_repeat 2 36 0 231 125 0 0 chr2 7494841 7494881 -245761702 + (GA)n Simple_repeat Simple_repeat 1 40 0 423 239 26 84 chr2 7495441 7495596 -245760987 - MLT1J LTR MaLR -31 480 335 246 345 63 21 chr2 7496137 7496279 -245760304 + MIR SINE MIR 21 168 -94 202 314 144 0 chr2 7496753 7496871 -245759712 + L2 LINE L2 3179 3313 0 347 261 42 42 chr2 7498154 7498173 -245758410 - L1ME4a LINE L1 -213 5908 5890 2041 147 3 0 chr2 7498173 7498466 -245758117 - AluSx SINE Alu -18 294 1 347 261 42 42 chr2 7498466 7498588 -245757995 - L1ME4a LINE L1 -230 5891 5767 1456 227 164 41 chr2 7499074 7499753 -245756830 + LTR41 LTR ERVL 1 762 -11 21 0 0 0 chr2 7500062 7500083 -245756500 + AT_rich Low_complexity Low_complexity 1 21 0 592 286 6 6 chr2 7500243 7500425 -245756158 + MER58A DNA MER1_type 43 224 0 332 350 127 0 chr2 7500551 7500771 -245755812 + MIR SINE MIR 2 249 -13 192 262 66 16 chr2 7500824 7500885 -245755698 - MIR SINE MIR -188 74 11 1412 211 156 70 chr2 7501131 7501733 -245754850 + MLT1E1 LTR MaLR 1 654 0 1711 262 44 30 chr2 7502396 7503006 -245753577 - MLT1E2 LTR MaLR -7 619 1 207 391 64 9 chr2 7504243 7504353 -245752230 + L2 LINE L2 3137 3252 -20 235 367 143 35 chr2 7506590 7507015 -245749568 - L2 LINE L2 -661 2653 2183 209 286 18 0 chr2 7507717 7507773 -245748810 + MER5A DNA MER1_type 9 65 -124 28 29 0 0 chr2 7508215 7508250 -245748333 + AT_rich Low_complexity Low_complexity 1 35 0 216 256 105 12 chr2 7509608 7509694 -245746889 - MIR SINE MIR -61 147 54 295 263 12 12 chr2 7510626 7510706 -245745877 - MIR3 SINE MIR -31 177 98 21 36 0 0 chr2 7512015 7512043 -245744540 + AT_rich Low_complexity Low_complexity 1 28 0 2437 88 3 3 chr2 7513322 7513629 -245742954 - AluSq SINE Alu -6 307 1 343 333 62 23 chr2 7513740 7513917 -245742666 + MIR SINE MIR 46 229 -33 588 197 79 17 chr2 7514113 7514291 -245742292 - MER53 DNA DNA 0 189 1 1938 145 26 57 chr2 7514831 7515217 -245741366 - THE1C LTR MaLR -1 374 1 2281 113 0 3 chr2 7515734 7516035 -245740548 + AluSx SINE Alu 1 300 -12 462 157 0 0 chr2 7516562 7516645 -245739938 + CT-rich Low_complexity Low_complexity 2 84 0 3041 82 42 5 chr2 7516734 7517162 -245739421 - MLT2A1 LTR ERVL 0 444 1 1552 232 132 5 chr2 7517189 7517637 -245738946 - MLT1D LTR MaLR 0 505 1 1821 161 3 25 chr2 7518393 7518709 -245737874 + AluSx SINE Alu 1 309 -3 438 215 27 102 chr2 7518965 7519151 -245737432 - MER69A DNA AcHobo 0 177 6 474 224 5 170 chr2 7519256 7519479 -245737104 + MER5A DNA MER1_type 1 186 -3 5541 62 19 27 chr2 7520393 7521165 -245735418 + MER4E LTR ERV1 1 766 0 1774 225 66 4 chr2 7522399 7522871 -245733712 - L1MC2 LINE L1 -18 6326 5826 2237 242 21 5 chr2 7522878 7523530 -245733053 - L1MC2 LINE L1 -943 5203 4541 351 100 43 0 chr2 7523541 7523611 -245732972 + (TA)n Simple_repeat Simple_repeat 2 74 0 448 104 0 0 chr2 7523669 7523736 -245732847 - L1PA5 LINE L1 -6 6148 6082 2000 24 8 0 chr2 7523736 7523983 -245732600 + L1P2 LINE L1 5369 5617 -537 * 5296 264 22 17 chr2 7523977 7526001 -245730582 - L1MC2 LINE L1 -1589 4557 2524 487 371 79 21 chr2 7526345 7526763 -245729820 - L2 LINE L2 -794 2520 2079 2702 101 15 2 chr2 7527290 7527687 -245728896 - L1MA1 LINE L1 -9 6293 5892 2155 261 69 28 chr2 7527813 7528941 -245727642 - L1ME1 LINE L1 -80 6086 4913 2105 121 3 13 chr2 7530393 7530707 -245725876 - AluY SINE Alu 0 311 1 416 317 194 30 chr2 7532060 7532492 -245724091 - L2 LINE L2 -7 3306 2804 2263 122 42 11 chr2 7532497 7532850 -245723733 - THE1B LTR MaLR 0 364 1 2795 161 73 19 chr2 7532958 7533603 -245722980 + L1MB3 LINE L1 5497 6176 -7 248 258 39 62 chr2 7533609 7533737 -245722846 - L2 LINE L2 -609 2705 2581 694 309 69 69 chr2 7533778 7533888 -245722695 - L2 LINE L2 -1504 1810 1701 207 0 0 0 chr2 7533888 7533911 -245722672 + (TG)n Simple_repeat Simple_repeat 1 23 0 694 309 69 69 chr2 7533911 7534382 -245722201 - L2 LINE L2 -1612 1702 1229 188 244 0 0 chr2 7534397 7534438 -245722145 - MIR SINE MIR -71 191 151 188 217 206 33 chr2 7534619 7534711 -245721872 - MIR SINE MIR -141 121 14 5290 160 10 15 chr2 7535638 7536805 -245719778 + L1MA4 LINE L1 5129 6289 -11 260 212 182 15 chr2 7536937 7537069 -245719514 + L1ME LINE L1 5492 5645 -476 295 250 0 0 chr2 7537476 7537544 -245719039 + MIR SINE MIR 176 243 -19 274 221 26 26 chr2 7537626 7537703 -245718880 + CT-rich Low_complexity Low_complexity 3 79 0 23 0 0 0 chr2 7538906 7538929 -245717654 + AT_rich Low_complexity Low_complexity 1 23 0 190 230 46 92 chr2 7539048 7539135 -245717448 + L2 LINE L2 3231 3313 0 201 356 53 53 chr2 7539215 7539347 -245717236 + L2 LINE L2 3137 3268 -4 1283 226 3 66 chr2 7540471 7540789 -245715794 + AluJb SINE Alu 14 311 -1 474 274 48 12 chr2 7541154 7541322 -245715261 + MLT1I LTR MaLR 201 374 -35 480 198 0 0 chr2 7541324 7541405 -245715178 - FLAM_A SINE Alu -36 106 26 1257 226 54 11 chr2 7541557 7541907 -245714676 - MLT1A1 LTR MaLR 0 365 1 349 309 147 6 chr2 7542612 7542811 -245713772 - MIR SINE MIR -11 251 27 3448 38 38 0 chr2 7542991 7543442 -245713141 + L1P LINE L1 4545 5012 -1134 7657 148 11 46 chr2 7544731 7546215 -245710368 - THE1C-int LTR MaLR -145 1435 4 1761 144 79 20 chr2 7546218 7546572 -245710011 - THE1C LTR MaLR 0 375 1 326 296 82 60 chr2 7546928 7547161 -245709422 + MIR SINE MIR 20 257 -5 1421 248 86 9 chr2 7547197 7547652 -245708931 - MLT1E2 LTR MaLR 0 626 137 182 269 31 125 chr2 7547816 7547976 -245708607 + MIR SINE MIR 68 212 -50 26 0 0 0 chr2 7548109 7548135 -245708448 + AT_rich Low_complexity Low_complexity 1 26 0 12878 167 56 10 chr2 7548136 7554093 -245702490 - L1PB1 LINE L1 -1 6866 636 994 183 5 0 chr2 7554095 7554292 -245702291 - L1PB1 LINE L1 -6663 200 3 184 315 0 19 chr2 7554829 7554883 -245701700 + MIR SINE MIR 23 75 -187 217 320 57 41 chr2 7555182 7555304 -245701279 - MIR SINE MIR -137 125 2 1379 246 47 27 chr2 7556639 7557087 -245699496 + LTR40b LTR ERVL 6 462 0 290 215 31 0 chr2 7557149 7557214 -245699369 + HERVL40 LTR ERVL 2830 2896 -2634 845 265 13 22 chr2 7558304 7558635 -245697948 + HERVL40 LTR ERVL 2779 5505 -25 1107 276 63 15 chr2 7558657 7559067 -245697516 + LTR40b LTR ERVL 1 430 -32 433 257 138 84 chr2 7559091 7559387 -245697196 + L2 LINE L2 2994 3305 -8 2238 119 0 0 chr2 7560885 7561179 -245695404 + AluSg SINE Alu 1 294 -16 312 296 136 12 chr2 7561434 7561603 -245694980 - L1ME2 LINE L1 -226 5938 5749 201 262 0 0 chr2 7563416 7563458 -245693125 + T-rich Low_complexity Low_complexity 3 44 0 662 311 19 0 chr2 7564442 7564654 -245691929 - MIR SINE MIR 0 262 47 364 355 11 26 chr2 7565629 7565818 -245690765 - MER5A DNA MER1_type -3 186 1 1385 259 25 57 chr2 7566272 7567005 -245689578 - L1M4 LINE L1 -2203 4179 3471 2111 132 0 0 chr2 7567184 7567472 -245689111 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr2 7567497 7567530 -245689053 + AT_rich Low_complexity Low_complexity 1 33 0 334 246 165 50 chr2 7567530 7567759 -245688824 - L1ME LINE L1 -5477 593 329 186 43 0 0 chr2 7567759 7567782 -245688801 + (TTCTC)n Simple_repeat Simple_repeat 2 24 0 334 246 165 50 chr2 7567782 7567812 -245688771 - L1ME LINE L1 -5741 329 304 490 281 25 20 chr2 7567824 7568020 -245688563 - L1ME LINE L1 -5867 203 7 245 325 17 38 chr2 7568108 7568348 -245688235 - L1MEc LINE L1 -4781 1436 1202 1191 218 128 22 chr2 7568358 7568725 -245687858 + LTR52 LTR ERVL 1 406 -15 375 336 40 57 chr2 7568834 7569999 -245686584 - L1MEc LINE L1 -5176 1220 76 425 224 9 9 chr2 7570509 7570616 -245685967 + L1M4 LINE L1 4898 5004 -1142 224 308 112 65 chr2 7570767 7570936 -245685647 - L2 LINE L2 -158 3114 2938 248 230 143 0 chr2 7571871 7571997 -245684586 + L1ME4a LINE L1 5977 6120 -1 32 86 0 0 chr2 7572047 7572128 -245684455 + AT_rich Low_complexity Low_complexity 1 81 0 467 89 0 13 chr2 7572940 7573019 -245683564 + (GA)n Simple_repeat Simple_repeat 1 78 0 875 186 94 144 chr2 7573019 7573400 -245683183 - MLT1A1 LTR MaLR -3 362 1 218 200 0 20 chr2 7573400 7573450 -245683133 + GA-rich Low_complexity Low_complexity 1 49 0 1431 50 0 0 chr2 7573491 7573671 -245682912 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 243 88 0 0 chr2 7573671 7573705 -245682878 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 295 250 0 93 chr2 7574699 7574760 -245681823 - L2 LINE L2 -38 3275 3227 2074 169 25 0 chr2 7574760 7575114 -245681469 + THE1B LTR MaLR 2 364 0 295 250 0 93 chr2 7575114 7575160 -245681423 - L2 LINE L2 -86 3227 3178 206 337 11 11 chr2 7575519 7575614 -245680969 - L2 LINE L2 -571 2743 2649 1776 181 68 32 chr2 7575855 7576296 -245680287 - LTR2B LTR ERV1 0 490 34 955 322 123 4 chr2 7576678 7577132 -245679451 + L2 LINE L2 2208 2715 -599 21 36 0 0 chr2 7577133 7577161 -245679422 + AT_rich Low_complexity Low_complexity 1 28 0 301 349 90 42 chr2 7577569 7577758 -245678825 - L2 LINE L2 0 3272 3075 359 195 0 12 chr2 7578315 7578397 -245678186 - L1MA5 LINE L1 -6 6294 6214 1297 194 3 3 chr2 7578397 7578681 -245677902 + L1 LINE L1 4960 5243 -903 183 333 0 0 chr2 7579997 7580060 -245676523 + L2 LINE L2 3176 3238 -75 5290 66 25 29 chr2 7581731 7582500 -245674083 - MER4E LTR ERV1 0 766 1 561 240 5 163 chr2 7583411 7583632 -245672951 - MER5A DNA MER1_type -3 186 1 430 192 30 114 chr2 7583737 7583904 -245672679 + MER69A DNA AcHobo 6 158 -19 429 137 26 0 chr2 7583947 7584064 -245672519 + (TA)n Simple_repeat Simple_repeat 1 120 0 208 356 0 11 chr2 7584348 7584438 -245672145 + L2 LINE L2 3213 3301 -12 358 328 78 10 chr2 7584520 7584724 -245671859 - MIR SINE MIR -39 223 6 2328 105 3 0 chr2 7584761 7585065 -245671518 + AluSp SINE Alu 4 308 -5 525 145 37 0 chr2 7586043 7586241 -245670342 + (TA)n Simple_repeat Simple_repeat 1 205 0 35 0 0 0 chr2 7586215 7586250 -245670333 + AT_rich Low_complexity Low_complexity 1 35 0 * 205 293 158 12 chr2 7588450 7588532 -245668051 - L2 LINE L2 -4 3268 3175 23 0 0 0 chr2 7588771 7588794 -245667789 + AT_rich Low_complexity Low_complexity 1 23 0 225 191 0 0 chr2 7589369 7589411 -245667172 + (CA)n Simple_repeat Simple_repeat 2 43 0 1977 147 7 0 chr2 7590097 7590390 -245666193 - AluSx SINE Alu -17 295 1 721 242 28 22 chr2 7590479 7590661 -245665922 + MER5A DNA MER1_type 1 183 -6 513 139 13 0 chr2 7591299 7591378 -245665205 + MADE1 DNA Mariner 1 80 0 196 333 26 9 chr2 7591422 7591536 -245665047 - MIR3 SINE MIR -6 202 87 504 287 187 5 chr2 7591708 7591917 -245664666 - Charlie8 DNA MER1_type -2161 256 10 343 333 0 0 chr2 7592260 7592350 -245664233 - MER5B DNA MER1_type -25 153 64 21 0 0 0 chr2 7593150 7593171 -245663412 + AT_rich Low_complexity Low_complexity 1 21 0 694 315 58 46 chr2 7593514 7593930 -245662653 - L2 LINE L2 -804 2510 2090 225 180 0 0 chr2 7593943 7593993 -245662590 + (TA)n Simple_repeat Simple_repeat 2 51 0 184 284 149 0 chr2 7593996 7594130 -245662453 + L2 LINE L2 3098 3251 -62 326 298 114 46 chr2 7594278 7595938 -245660645 + L1M2 LINE L1 3806 5573 -584 300 304 163 28 chr2 7595951 7596240 -245660343 + L1ME3A LINE L1 5619 5946 -224 3329 129 18 60 chr2 7596659 7597209 -245659374 - MER1A DNA MER1_type 0 527 1 670 314 9 14 chr2 7598261 7598481 -245658102 + MIR SINE MIR 31 249 -13 228 35 0 0 chr2 7599700 7599729 -245656854 + (TG)n Simple_repeat Simple_repeat 1 29 0 2259 149 21 21 chr2 7600103 7600478 -245656105 - THE1C LTR MaLR 0 375 1 497 299 35 70 chr2 7600876 7601271 -245655312 - L1MC/D LINE L1 -330 5791 5411 255 150 0 0 chr2 7601906 7601946 -245654637 + L2 LINE L2 3255 3294 -19 1107 153 0 0 chr2 7602493 7602677 -245653906 - AluSg/x SINE Alu 0 314 131 363 268 53 72 chr2 7602829 7603038 -245653545 - MLT1I LTR MaLR -14 395 191 327 49 0 0 chr2 7603305 7603346 -245653237 + (TC)n Simple_repeat Simple_repeat 1 41 0 246 32 0 0 chr2 7603345 7603376 -245653207 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 2155 113 0 7 chr2 7604055 7604347 -245652236 + AluSg SINE Alu 1 290 -20 285 292 0 21 chr2 7604434 7604530 -245652053 - MLT1J LTR MaLR -145 366 273 259 300 11 11 chr2 7604591 7604681 -245651902 - MLT1L LTR MaLR -354 261 172 1841 131 34 14 chr2 7604709 7605000 -245651583 - AluJo SINE Alu -4 308 12 484 295 62 29 chr2 7605140 7605381 -245651202 + MIR SINE MIR 2 250 -12 393 319 223 15 chr2 7605739 7606325 -245650258 + L2 LINE L2 2593 3308 -5 291 318 70 0 chr2 7607459 7607588 -245648995 - MIR SINE MIR -75 187 50 693 143 9 9 chr2 7607752 7607864 -245648719 - AluSg/x SINE Alu -12 300 189 1396 176 36 112 chr2 7608660 7609053 -245647530 + MLT1A1 LTR MaLR 3 365 0 351 229 201 14 chr2 7609186 7609330 -245647253 + MIR SINE MIR 22 192 -70 208 361 0 10 chr2 7612985 7613082 -245643501 + L2 LINE L2 3168 3263 -50 522 284 36 105 chr2 7613339 7613701 -245642882 + MLT1I LTR MaLR 71 407 -2 227 315 120 9 chr2 7614051 7614159 -245642424 - L2 LINE L2 0 3313 3194 632 228 55 22 chr2 7614164 7614346 -245642237 + MER3 DNA MER1_type 1 141 -68 309 281 110 44 chr2 7614584 7614901 -245641682 - L2 LINE L2 -126 3187 2850 25 31 0 0 chr2 7615210 7615242 -245641341 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr2 7615954 7615986 -245640597 + AT_rich Low_complexity Low_complexity 1 32 0 1609 196 7 4 chr2 7615988 7616269 -245640314 - AluJo SINE Alu -30 282 1 305 248 137 0 chr2 7618274 7618391 -245638192 + L2 LINE L2 2060 2192 -1122 839 287 90 61 chr2 7618500 7618544 -245638039 + L2 LINE L2 2575 2616 -697 1032 269 108 70 chr2 7618544 7619071 -245637512 + MLT1H LTR MaLR 1 547 -2 839 287 90 61 chr2 7619071 7619734 -245636849 + L2 LINE L2 2616 3313 0 2163 140 33 36 chr2 7619848 7620212 -245636371 - THE1B LTR MaLR -1 363 1 22 0 0 0 chr2 7620348 7620370 -245636213 + AT_rich Low_complexity Low_complexity 1 22 0 525 324 155 44 chr2 7620662 7621509 -245635074 + L3 LINE CR1 634 1574 -3 495 348 79 12 chr2 7621853 7622106 -245634477 + L3 LINE CR1 364 633 -944 382 279 82 123 chr2 7622265 7622365 -245634218 + L3 LINE CR1 931 1034 -543 2044 126 0 3 chr2 7622365 7622650 -245633933 + AluSc SINE Alu 1 284 -25 315 0 0 0 chr2 7622654 7622689 -245633894 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 382 279 82 123 chr2 7622689 7622924 -245633659 + L3 LINE CR1 1037 1257 -320 266 283 57 9 chr2 7624899 7625005 -245631578 - MIR SINE MIR -47 215 105 429 305 92 17 chr2 7625167 7625341 -245631242 - MIR SINE MIR -28 234 48 271 396 35 30 chr2 7626892 7627061 -245629522 + MIR3 SINE MIR 8 177 -31 248 323 32 0 chr2 7627274 7627367 -245629216 - MIR SINE MIR -76 186 91 230 252 50 59 chr2 7627692 7627811 -245628772 - MIR SINE MIR -29 233 116 328 278 56 76 chr2 7627965 7628267 -245628316 + MLT1I LTR MaLR 97 392 -17 27 22 0 22 chr2 7628494 7628515 -245628068 + AT_rich Low_complexity Low_complexity 1 21 -23 2205 97 7 0 chr2 7628515 7628804 -245627779 - AluSg SINE Alu -19 291 1 27 22 0 22 chr2 7628804 7628827 -245627756 + AT_rich Low_complexity Low_complexity 21 44 0 373 324 9 0 chr2 7629500 7629611 -245626972 + MER81 DNA DNA 3 114 0 364 273 23 0 chr2 7629906 7629994 -245626589 + MER5B DNA MER1_type 17 106 -72 184 308 0 0 chr2 7630051 7630103 -245626480 + MER5B DNA MER1_type 126 177 -1 2677 215 21 57 chr2 7631244 7631871 -245624712 + MER77 LTR ERV1 2 605 0 2130 149 41 3 chr2 7631896 7632238 -245624345 - THE1A LTR MaLR 0 355 1 12009 106 11 0 chr2 7632238 7633800 -245622783 - THE1A-int LTR MaLR 0 1580 1 2423 119 35 6 chr2 7633801 7634145 -245622438 - THE1A LTR MaLR -1 354 1 651 291 29 107 chr2 7634858 7635380 -245621203 + MER34 LTR ERV1 1 481 -61 1371 186 41 11 chr2 7635486 7635755 -245620828 - AluJb SINE Alu -24 288 12 2653 108 6 0 chr2 7635755 7636108 -245620475 - THE1A LTR MaLR 0 355 1 12322 95 10 1 chr2 7636108 7637672 -245618911 - THE1A-int LTR MaLR 0 1580 3 2544 108 35 3 chr2 7637674 7638018 -245618565 - THE1A LTR MaLR 0 355 1 1706 178 3 3 chr2 7639262 7639548 -245617035 - AluJb SINE Alu -11 301 16 198 288 51 0 chr2 7639748 7639807 -245616776 + L2 LINE L2 3252 3313 0 218 377 28 0 chr2 7640486 7640592 -245615991 - L2 LINE L2 -5 3308 3200 249 128 0 0 chr2 7640992 7641039 -245615544 + (TG)n Simple_repeat Simple_repeat 2 48 0 287 319 109 57 chr2 7641389 7641775 -245614808 - L2 LINE L2 -8 3305 2900 21 0 0 0 chr2 7642327 7642348 -245614235 + AT_rich Low_complexity Low_complexity 1 21 0 221 160 0 20 chr2 7642589 7642639 -245613944 + CT-rich Low_complexity Low_complexity 3 51 0 914 280 114 15 chr2 7642696 7643305 -245613278 - L1ME3A LINE L1 -226 5944 5262 2140 131 111 57 chr2 7643381 7643787 -245612796 - MSTA LTR MaLR 0 428 1 1562 226 30 117 chr2 7644174 7645013 -245611570 - L1ME3A LINE L1 -1483 4663 3898 4263 165 20 17 chr2 7645013 7645728 -245610855 + MER50 LTR ERV1 1 717 -17 659 251 53 5 chr2 7645733 7645940 -245610643 - L1ME3A LINE L1 -2254 3892 3676 691 213 38 6 chr2 7645941 7646101 -245610482 - LTR52 LTR ERVL -2 419 255 918 251 109 34 chr2 7646229 7646795 -245609788 - L1ME3A LINE L1 -2468 3678 3070 453 220 159 28 chr2 7647691 7647873 -245608710 - L1M4 LINE L1 -1479 4667 4462 304 302 163 6 chr2 7647984 7648156 -245608427 - L3 LINE CR1 -97 1480 1282 203 217 65 0 chr2 7648819 7648865 -245607718 - MIR SINE MIR -88 174 126 228 319 34 25 chr2 7649110 7649229 -245607354 - MIR SINE MIR -34 228 109 2195 172 40 27 chr2 7649229 7649772 -245606811 + MLT2A2 LTR ERVL 1 554 0 4020 154 53 80 chr2 7649870 7650674 -245605909 - LTR1 LTR ERV1 0 785 3 2145 156 21 32 chr2 7650986 7651365 -245605218 - THE1C LTR MaLR 0 375 1 2807 95 8 0 chr2 7652000 7652359 -245604224 + THE1B LTR MaLR 1 362 -2 246 235 73 0 chr2 7652434 7652502 -245604081 - MIR SINE MIR -117 91 19 1614 114 5 0 chr2 7654748 7654967 -245601616 + AluSq SINE Alu 78 297 -16 734 260 29 19 chr2 7656300 7656508 -245600075 - MER63A DNA MER1_type 0 210 1 387 0 0 0 chr2 7656802 7656845 -245599738 + (CA)n Simple_repeat Simple_repeat 1 43 0 27 29 0 0 chr2 7658986 7659020 -245597563 + AT_rich Low_complexity Low_complexity 1 34 0 2901 198 101 26 chr2 7659478 7660219 -245596364 + MER63D DNA MER1_type 1 797 -264 564 229 0 0 chr2 7660217 7660322 -245596261 + MER63D DNA MER1_type 954 1058 -2 * 213 39 0 0 chr2 7661044 7661070 -245595513 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 182 36 0 36 chr2 7661663 7661691 -245594892 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 198 299 42 49 chr2 7661881 7662025 -245594558 + MIR SINE MIR 20 162 -100 237 257 138 18 chr2 7663267 7663376 -245593207 + L3 LINE CR1 1406 1527 -50 218 235 20 0 chr2 7666339 7666390 -245590193 + CT-rich Low_complexity Low_complexity 3 54 0 363 314 109 46 chr2 7667175 7667313 -245589270 + MIR SINE MIR 7 160 -102 2209 106 27 7 chr2 7667313 7667614 -245588969 + AluSg SINE Alu 1 307 -3 363 314 109 46 chr2 7667614 7667650 -245588933 + MIR SINE MIR 160 192 -70 193 279 63 13 chr2 7667878 7667957 -245588626 + L2 LINE L2 2772 2854 -460 221 351 98 44 chr2 7668026 7668251 -245588332 + L2 LINE L2 3004 3240 -32 2270 121 0 0 chr2 7668320 7668625 -245587958 - AluSg SINE Alu -5 305 1 848 145 0 0 chr2 7669136 7669313 -245587270 + AluSg/x SINE Alu 166 310 0 380 336 23 0 chr2 7669313 7669441 -245587142 - L2 LINE L2 -620 2694 2564 1013 159 25 0 chr2 7669466 7669623 -245586960 - AluSg/x SINE Alu -14 298 138 1793 283 114 34 chr2 7669626 7670540 -245586043 - L2 LINE L2 -773 2541 1555 525 121 0 0 chr2 7671102 7671185 -245585398 + (TTTC)n Simple_repeat Simple_repeat 1 83 0 843 114 13 7 chr2 7671202 7671351 -245585232 + (TTCTC)n Simple_repeat Simple_repeat 5 154 0 1357 160 94 22 chr2 7671353 7671628 -245584955 - AluJo SINE Alu -17 295 1 252 143 45 36 chr2 7671810 7671922 -245584661 + (TA)n Simple_repeat Simple_repeat 2 114 0 252 317 108 17 chr2 7671938 7672058 -245584525 - MIR SINE MIR -112 150 20 26 50 0 0 chr2 7672225 7672265 -245584318 + AT_rich Low_complexity Low_complexity 1 40 0 210 273 0 0 chr2 7672682 7672737 -245583846 + (TA)n Simple_repeat Simple_repeat 2 56 0 1944 131 0 4 chr2 7672896 7673171 -245583412 - AluSx SINE Alu -38 274 1 237 65 0 0 chr2 7673738 7673769 -245582814 + (TG)n Simple_repeat Simple_repeat 2 32 0 251 170 0 0 chr2 7673932 7673979 -245582604 + L1ME LINE L1 98 144 -5926 190 158 0 26 chr2 7674304 7674342 -245582241 + MIR SINE MIR 112 148 -60 279 292 94 74 chr2 7675329 7675531 -245581052 - MIR3 SINE MIR -2 206 1 304 277 56 97 chr2 7675926 7676010 -245580573 - MIR SINE MIR -13 249 163 1572 207 53 68 chr2 7676010 7676406 -245580177 - MLT1B LTR MaLR 0 390 1 304 277 56 97 chr2 7676406 7676516 -245580067 - MIR SINE MIR -99 163 63 287 336 88 13 chr2 7677324 7677550 -245579033 + MIR SINE MIR 10 252 -10 1693 178 0 0 chr2 7677592 7677868 -245578715 + AluJo SINE Alu 31 306 -6 252 289 218 13 chr2 7678474 7678630 -245577953 - MIR SINE MIR -72 190 3 354 306 108 35 chr2 7678638 7678870 -245577713 - MIR SINE MIR 0 262 14 2261 135 42 8 chr2 7678870 7679247 -245577336 - MLT1B LTR MaLR 0 390 1 2170 105 3 22 chr2 7680783 7681098 -245575485 + AluSx SINE Alu 1 309 -3 1125 282 61 16 chr2 7682173 7682738 -245573845 + MER20B DNA MER1_type 10 643 -140 815 174 0 36 chr2 7682756 7682894 -245573689 + FLAM_C SINE Alu 1 133 0 329 321 95 54 chr2 7683376 7683744 -245572839 - L1ME LINE L1 -460 5702 5320 232 281 61 79 chr2 7685039 7685153 -245571430 - L2 LINE L2 -31 3282 3171 409 299 44 0 chr2 7685498 7685635 -245570948 - MIR3 SINE MIR -50 158 16 204 40 0 0 chr2 7685745 7685770 -245570813 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 190 269 128 13 chr2 7685880 7685958 -245570625 + L2 LINE L2 3147 3233 -39 821 277 139 30 chr2 7686074 7686543 -245570040 - LTR33A LTR ERVL 0 523 4 243 330 161 0 chr2 7687295 7687513 -245569070 - MIR SINE MIR -1 261 9 2366 86 201 5 chr2 7687739 7688113 -245568470 - LTR7 LTR ERV1 -3 447 1 360 307 97 38 chr2 7688129 7688367 -245568216 - MIR SINE MIR -9 253 2 219 337 142 30 chr2 7689894 7690063 -245566520 - MIR3 SINE MIR -11 197 10 546 157 9 52 chr2 7690503 7690618 -245565965 - MER3 DNA MER1_type -1 208 99 249 108 0 0 chr2 7690618 7690655 -245565928 + (T)n Simple_repeat Simple_repeat 1 37 0 6465 108 15 14 chr2 7690658 7692122 -245564461 - L1PA15 LINE L1 0 6165 4678 616 184 37 0 chr2 7692122 7692231 -245564352 - MER3 DNA MER1_type -96 113 1 216 331 66 54 chr2 7692403 7692569 -245564014 + L2 LINE L2 3098 3265 -7 1660 166 21 21 chr2 7692831 7693114 -245563469 + MER49 LTR ERV1 3 285 -638 1455 219 20 34 chr2 7693144 7693496 -245563087 + MER4D LTR ERV1 549 895 -8 400 181 52 26 chr2 7694159 7694275 -245562308 - LTR48 LTR ERV1 -48 739 621 1482 131 146 33 chr2 7694302 7694636 -245561947 - LTR49 LTR ERV1 -251 344 1 26 30 0 0 chr2 7694647 7694680 -245561903 + AT_rich Low_complexity Low_complexity 1 33 0 417 20 0 0 chr2 7696655 7696705 -245559878 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 804 240 16 87 chr2 7696799 7697041 -245559542 + AluJo SINE Alu 47 271 -41 664 241 48 28 chr2 7697090 7697387 -245559196 - L1M4 LINE L1 -2797 3349 3042 2544 58 0 0 chr2 7697387 7697695 -245558888 - AluY SINE Alu -3 308 1 664 241 48 28 chr2 7697695 7697749 -245558834 - L1M4 LINE L1 -3104 3042 2991 226 307 107 60 chr2 7697856 7698006 -245558577 + MIR SINE MIR 28 184 -78 385 274 109 57 chr2 7698219 7698449 -245558134 - MIR SINE MIR -9 253 12 265 273 75 68 chr2 7699240 7699401 -245557182 + MIR3 SINE MIR 3 164 -44 2191 109 7 0 chr2 7699857 7700150 -245556433 + AluSx SINE Alu 5 299 -13 1831 189 46 38 chr2 7700723 7701094 -245555489 + MLT1A2 LTR MaLR 1 374 0 3451 118 70 62 chr2 7701530 7701845 -245554738 - LTR29 LTR ERV1 0 622 298 2038 110 69 7 chr2 7701845 7702136 -245554447 - AluSq SINE Alu 0 313 5 3451 118 70 62 chr2 7702136 7702437 -245554146 - LTR29 LTR ERV1 -324 298 1 1643 210 52 9 chr2 7702609 7702957 -245553626 + MLT1A1 LTR MaLR 1 363 -2 664 271 66 6 chr2 7703610 7703776 -245552807 - AluJb SINE Alu 0 312 137 252 337 12 0 chr2 7704084 7704170 -245552413 + MIR SINE MIR 30 116 -92 2386 133 10 41 chr2 7704485 7704898 -245551685 + MER57A LTR ERV1 4 403 0 1863 116 0 8 chr2 7706433 7706691 -245549892 + AluSc SINE Alu 44 299 -10 25 65 0 0 chr2 7707116 7707162 -245549421 + AT_rich Low_complexity Low_complexity 1 46 0 585 237 95 25 chr2 7707349 7707570 -245549013 - L1MC4a LINE L1 -5 7803 6111 649 87 22 0 chr2 7707623 7707715 -245548868 - AluSc SINE Alu -7 302 209 228 35 0 0 chr2 7707747 7707776 -245548807 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 305 123 70 0 chr2 7707776 7707833 -245548750 - AluJ/FRAM SINE Alu -16 286 226 2135 82 7 21 chr2 7708200 7708491 -245548092 - AluSg SINE Alu -23 287 1 21 0 0 0 chr2 7708497 7708518 -245548065 + AT_rich Low_complexity Low_complexity 1 21 0 626 294 70 22 chr2 7709005 7709233 -245547350 - MIR SINE MIR -21 241 3 38 0 0 0 chr2 7709351 7709389 -245547194 + AT_rich Low_complexity Low_complexity 1 38 0 5840 32 5 0 chr2 7709389 7710040 -245546543 - L1PA5 LINE L1 -11 6143 5490 189 338 50 12 chr2 7710306 7710386 -245546197 - L2 LINE L2 -222 3050 2968 843 152 0 8 chr2 7710443 7710575 -245546008 - AluJb SINE Alu -181 131 1 2509 117 29 49 chr2 7710693 7711078 -245545505 + MER51B LTR ERV1 1 377 0 1814 153 28 93 chr2 7711292 7711691 -245544892 - THE1C LTR MaLR -2 373 1 306 164 0 0 chr2 7712449 7712504 -245544079 + T-rich Low_complexity Low_complexity 1 55 0 268 316 175 0 chr2 7713264 7713378 -245543205 + MIR3 SINE MIR 56 189 -19 3600 193 64 3 chr2 7713441 7714129 -245542454 - MER44D DNA MER2_type 0 605 4 1811 179 47 6 chr2 7715087 7715451 -245541132 + MLT1B LTR MaLR 1 379 -11 755 184 40 40 chr2 7715669 7715843 -245540740 + MER5B DNA MER1_type 5 178 0 218 32 32 0 chr2 7717547 7717578 -245539005 + (TG)n Simple_repeat Simple_repeat 2 33 0 226 254 0 0 chr2 7717711 7717766 -245538817 + (TA)n Simple_repeat Simple_repeat 1 55 0 2185 102 30 0 chr2 7717918 7718213 -245538370 + AluSx SINE Alu 1 304 -8 245 341 0 24 chr2 7718242 7718368 -245538215 + MIR SINE MIR 2 122 -86 1569 186 0 28 chr2 7718941 7719231 -245537352 + AluJo SINE Alu 1 282 -30 1375 202 4 0 chr2 7719350 7719583 -245537000 + MER46A DNA MER2_type 3 236 0 370 302 119 13 chr2 7719812 7719971 -245536612 - MIR SINE MIR -77 185 10 387 287 16 23 chr2 7721210 7721339 -245535244 - MIR SINE MIR -107 155 28 234 320 24 40 chr2 7721951 7722076 -245534507 + MIR SINE MIR 22 144 -118 245 322 70 35 chr2 7722388 7722503 -245534080 + MIR SINE MIR 62 180 -82 1411 256 77 35 chr2 7723900 7724435 -245532148 - MER77 LTR ERV1 -4 601 45 354 378 18 9 chr2 7724438 7724655 -245531928 + L2 LINE L2 2579 2797 -517 31 0 0 0 chr2 7724717 7724748 -245531835 + AT_rich Low_complexity Low_complexity 1 31 0 277 317 67 8 chr2 7724972 7725092 -245531491 + MIR SINE MIR 2 128 -134 2420 82 0 22 chr2 7725154 7725470 -245531113 - AluSg SINE Alu -1 309 1 260 299 0 0 chr2 7725508 7725575 -245531008 - L2 LINE L2 -48 3265 3199 188 300 17 17 chr2 7726355 7726415 -245530168 + MIR SINE MIR 8 67 -195 1016 171 17 11 chr2 7726811 7726992 -245529591 + AluJo SINE Alu 99 280 -32 257 0 30 0 chr2 7727167 7727200 -245529383 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 315 65 0 0 chr2 7727621 7727667 -245528916 - MADE1 DNA Mariner -34 46 1 204 338 0 0 chr2 7728730 7728798 -245527785 - L2 LINE L2 -216 3056 2989 241 373 127 19 chr2 7730261 7730473 -245526110 - MIR SINE MIR -8 254 20 184 53 53 26 chr2 7730488 7730526 -245526057 + T-rich Low_complexity Low_complexity 2 40 0 1455 164 52 36 chr2 7730603 7730908 -245525675 + THE1C LTR MaLR 66 375 0 183 415 0 0 chr2 7730971 7731024 -245525559 - L2 LINE L2 -99 3173 3121 275 294 53 29 chr2 7731035 7731205 -245525378 - L2 LINE L2 -1 3312 3139 5587 167 30 8 chr2 7732176 7732341 -245524242 - L1MA10 LINE L1 -1 6333 6173 306 50 0 0 chr2 7732341 7732381 -245524202 + (TG)n Simple_repeat Simple_repeat 2 41 0 5587 167 30 8 chr2 7732381 7733223 -245523360 - L1MA10 LINE L1 -161 6173 5304 1852 182 34 16 chr2 7733270 7733655 -245522928 + L1 LINE L1 4867 5258 -888 204 41 61 61 chr2 7733947 7733996 -245522587 + A-rich Low_complexity Low_complexity 1 49 0 354 297 90 49 chr2 7734985 7735251 -245521332 - MLT1I LTR MaLR -35 374 98 332 292 71 42 chr2 7736120 7736288 -245520295 + L2 LINE L2 2587 2759 -555 346 292 28 130 chr2 7736391 7736684 -245519899 + L2 LINE L2 2793 3054 -218 308 295 139 16 chr2 7736818 7736940 -245519643 + L2 LINE L2 3136 3272 0 186 43 0 0 chr2 7737758 7737781 -245518802 + (T)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr2 7738138 7738161 -245518422 + AT_rich Low_complexity Low_complexity 1 23 0 1278 177 83 36 chr2 7738587 7738864 -245517719 - AluJo SINE Alu -19 293 4 1842 166 42 101 chr2 7739080 7739220 -245517363 - MER57A LTR ERV1 0 403 256 2323 117 0 0 chr2 7739220 7739528 -245517055 + AluSx SINE Alu 1 308 -4 264 30 0 0 chr2 7739528 7739561 -245517022 + (GA)n Simple_repeat Simple_repeat 2 34 0 1842 166 42 101 chr2 7739561 7739847 -245516736 - MER57A LTR ERV1 -145 258 1 377 332 47 33 chr2 7740893 7741257 -245515326 + L1ME LINE L1 4104 4472 -1674 22 0 0 0 chr2 7741689 7741711 -245514872 + AT_rich Low_complexity Low_complexity 1 22 0 647 216 78 6 chr2 7741744 7741911 -245514672 + MER3 DNA MER1_type 31 209 0 245 279 124 43 chr2 7742063 7742224 -245514359 + L1ME LINE L1 5555 5728 -393 279 185 21 69 chr2 7742432 7742621 -245513962 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 816 181 0 36 chr2 7743120 7743258 -245513325 - FLAM_C SINE Alu 0 133 1 300 312 89 51 chr2 7743814 7743971 -245512612 - MIR3 SINE MIR -11 197 35 226 122 24 24 chr2 7744352 7744393 -245512190 + MLT1G LTR MaLR 550 590 0 330 311 0 66 chr2 7744631 7744782 -245511801 + MLT-int LTR MaLR 423 578 -793 367 266 131 88 chr2 7745363 7745683 -245510900 + MLT1E-int LTR MaLR 1032 1365 -6 258 244 13 42 chr2 7746050 7746085 -245510498 + MLT1G1 LTR MaLR 463 498 -97 2671 107 27 36 chr2 7746085 7746497 -245510086 + L1PA13 LINE L1 5752 6159 -4 258 244 13 42 chr2 7746497 7746558 -245510025 + MLT1G1 LTR MaLR 498 595 0 587 284 75 8 chr2 7746563 7746802 -245509781 + HAL1 LINE L1 1505 1759 -748 846 171 20 0 chr2 7746802 7746954 -245509629 + LTR49 LTR ERV1 1 155 -440 245 283 30 20 chr2 7747876 7747975 -245508608 - L2 LINE L2 -243 3070 2971 231 335 279 3 chr2 7748166 7748453 -245508130 + L2 LINE L2 2371 2736 -578 329 314 168 55 chr2 7748570 7749316 -245507267 - L2 LINE L2 0 3313 2480 462 255 162 10 chr2 7750047 7750373 -245506210 - L1MEc LINE L1 -1599 4616 4227 293 319 102 35 chr2 7750616 7751243 -245505340 - L1MEc LINE L1 -3138 3077 2409 1456 284 98 34 chr2 7751292 7751845 -245504738 + MLT1E LTR MaLR 6 593 0 301 280 28 42 chr2 7751845 7751988 -245504595 - L1MEc LINE L1 -4051 2345 2205 334 227 129 30 chr2 7752703 7752835 -245503748 - L1MC5 LINE L1 -35 7926 7782 523 240 7 13 chr2 7753410 7753564 -245503019 - L1MB8 LINE L1 -2 6176 6024 379 301 101 50 chr2 7753683 7754015 -245502568 - L1M4 LINE L1 -1712 4434 4120 2308 123 48 28 chr2 7754015 7754372 -245502211 - THE1B LTR MaLR 0 364 1 11887 109 4 5 chr2 7754372 7755954 -245500629 - THE1B-int LTR MaLR 0 1580 1 2326 121 51 28 chr2 7755954 7756310 -245500273 - THE1B LTR MaLR 0 364 1 379 301 101 50 chr2 7756310 7756689 -245499894 - L1M4 LINE L1 -2025 4121 3685 24 0 0 0 chr2 7756980 7757004 -245499579 + AT_rich Low_complexity Low_complexity 1 24 0 276 277 27 45 chr2 7757402 7757514 -245499069 - L1M4 LINE L1 -1907 4239 4130 191 279 82 33 chr2 7757538 7757599 -245498984 - L2 LINE L2 -49 3223 3160 248 320 103 16 chr2 7757650 7757844 -245498739 + L2 LINE L2 3102 3312 -1 473 337 10 10 chr2 7757848 7758047 -245498536 + MER58A DNA MER1_type 4 202 -22 540 85 11 79 chr2 7759127 7759304 -245497279 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 200 136 51 17 chr2 7759307 7759366 -245497217 + (CA)n Simple_repeat Simple_repeat 1 61 0 233 299 21 25 chr2 7759380 7759522 -245497061 + CT-rich Low_complexity Low_complexity 4 236 0 226 113 56 14 chr2 7759941 7760012 -245496571 + (CA)n Simple_repeat Simple_repeat 2 75 0 451 130 67 27 chr2 7760024 7760497 -245496086 + (CA)n Simple_repeat Simple_repeat 1 491 0 221 260 0 0 chr2 7761726 7761776 -245494807 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 2041 129 86 9 chr2 7761849 7762197 -245494386 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr2 7762624 7762654 -245493929 + AT_rich Low_complexity Low_complexity 1 30 0 307 315 31 39 chr2 7763780 7763907 -245492676 - MIR SINE MIR -66 142 17 299 276 35 43 chr2 7764242 7764358 -245492225 - MIR3 SINE MIR -81 127 13 870 282 32 16 chr2 7764526 7764778 -245491805 - MIR SINE MIR -4 258 3 842 174 114 0 chr2 7765787 7765954 -245490629 + MER5A DNA MER1_type 1 186 -3 210 37 0 0 chr2 7766329 7766356 -245490227 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 7766674 7766694 -245489889 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 256 246 60 78 chr2 7766749 7766916 -245489667 - L2 LINE L2 -33 3280 3117 189 250 0 0 chr2 7767116 7767152 -245489431 - L2 LINE L2 -96 3217 3182 190 320 100 0 chr2 7767206 7767306 -245489277 - L2 LINE L2 -168 3104 2995 237 306 0 0 chr2 7767346 7767408 -245489175 + G-rich Low_complexity Low_complexity 1 62 0 371 231 56 37 chr2 7768179 7768287 -245488296 - LTR41 LTR ERVL -6 767 658 282 139 0 0 chr2 7768936 7768979 -245487604 - LTR41 LTR ERVL -730 43 1 28 71 0 0 chr2 7769107 7769163 -245487420 + AT_rich Low_complexity Low_complexity 1 56 0 2160 146 47 16 chr2 7769358 7769722 -245486861 + THE1C LTR MaLR 1 375 0 2437 132 0 0 chr2 7769748 7770105 -245486478 + THE1C-int LTR MaLR 15 371 -1209 602 150 71 7 chr2 7770232 7770372 -245486211 + THE1C-int LTR MaLR 1432 1580 0 2015 145 67 20 chr2 7770372 7770730 -245485853 + THE1C LTR MaLR 1 375 0 750 313 55 19 chr2 7770744 7771051 -245485532 + L2 LINE L2 2996 3313 0 1415 226 92 15 chr2 7771539 7771876 -245484707 + MLT1A1 LTR MaLR 3 365 0 494 89 0 111 chr2 7772683 7772773 -245483810 + MADE1 DNA Mariner 1 80 0 387 0 0 0 chr2 7773224 7773267 -245483316 + (CA)n Simple_repeat Simple_repeat 2 44 0 2275 109 0 10 chr2 7774069 7774381 -245482202 - AluSc SINE Alu 0 309 1 1386 206 104 41 chr2 7775238 7775603 -245480980 - MLT1B LTR MaLR 0 390 3 2250 111 0 0 chr2 7775692 7775989 -245480594 + AluSq SINE Alu 1 297 -16 213 237 114 70 chr2 7776409 7776523 -245480060 + L2 LINE L2 3154 3272 0 385 183 14 0 chr2 7776536 7776607 -245479976 + MLT2B1 LTR ERVL 4 75 -445 921 108 31 0 chr2 7776616 7776745 -245479838 - AluSq/x SINE Alu -179 133 1 1036 226 100 73 chr2 7776747 7777186 -245479397 + MLT2B1 LTR ERVL 70 520 0 198 264 287 0 chr2 7777317 7777404 -245479179 - MER5A DNA MER1_type -1 188 77 3254 224 44 15 chr2 7778478 7779971 -245476612 - L1ME3A LINE L1 -11 6970 5425 1565 160 39 11 chr2 7779994 7780275 -245476308 - L1P LINE L1 -2415 3731 3443 918 239 81 10 chr2 7780265 7780562 -245476021 - L1ME3A LINE L1 -4791 2168 1851 * 2266 305 36 29 chr2 7780820 7781708 -245474875 - L1ME3A LINE L1 -5635 1224 105 310 239 14 113 chr2 7781721 7781863 -245474720 + L1MC4 LINE L1 6604 6731 -1311 592 249 86 79 chr2 7781909 7782167 -245474416 - L1ME LINE L1 -407 5763 5504 27 0 0 0 chr2 7783178 7783205 -245473378 + AT_rich Low_complexity Low_complexity 1 27 0 2370 92 7 0 chr2 7783214 7783517 -245473066 + AluSp SINE Alu 2 306 -7 2175 110 0 43 chr2 7783928 7784255 -245472328 + AluSq SINE Alu 1 313 0 398 271 65 0 chr2 7784290 7784397 -245472186 - MIR SINE MIR -30 232 119 2302 110 0 0 chr2 7784996 7785305 -245471278 - AluSc SINE Alu 0 309 1 251 225 0 124 chr2 7785982 7786071 -245470512 + L2 LINE L2 2985 3062 -210 681 277 50 5 chr2 7786446 7786648 -245469935 - MIR SINE MIR -31 231 21 2279 75 0 39 chr2 7787982 7788288 -245468295 + AluY SINE Alu 1 294 -17 354 23 0 0 chr2 7788294 7788337 -245468246 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 350 363 27 14 chr2 7788714 7788860 -245467723 + MER5A DNA MER1_type 3 150 -39 1865 40 0 5 chr2 7788999 7789223 -245467360 + AluY SINE Alu 2 224 -87 272 300 217 11 chr2 7789525 7789705 -245466878 + MIR SINE MIR 46 262 0 345 304 105 21 chr2 7790554 7790745 -245465838 - MIR SINE MIR -48 214 8 267 329 110 19 chr2 7790760 7790915 -245465668 + MIR3 SINE MIR 19 187 -21 233 288 188 29 chr2 7791221 7791391 -245465192 - MIR SINE MIR -32 230 34 219 238 0 49 chr2 7792383 7792460 -245464123 + GA-rich Low_complexity Low_complexity 1 116 0 435 19 0 0 chr2 7793164 7793216 -245463367 + (TG)n Simple_repeat Simple_repeat 2 53 0 296 331 64 43 chr2 7793361 7793514 -245463069 + MER5A DNA MER1_type 18 171 -7 221 318 91 76 chr2 7793509 7793641 -245462942 - MIR3 SINE MIR -39 169 36 * 524 228 93 25 chr2 7794034 7794196 -245462387 - MER58B DNA MER1_type 0 341 169 1575 162 19 15 chr2 7794683 7794778 -245461805 + AluSx SINE Alu 40 133 -179 234 0 0 0 chr2 7794778 7794804 -245461779 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1575 162 19 15 chr2 7794804 7794973 -245461610 + AluSx SINE Alu 133 305 -7 894 213 55 8 chr2 7794999 7795234 -245461349 - Zaphod DNA AcHobo -78 3953 3708 2138 172 0 18 chr2 7796012 7796355 -245460228 - MER1B DNA MER1_type 0 337 1 343 232 54 98 chr2 7796664 7796798 -245459785 - L1MC4a LINE L1 -322 5848 5719 188 388 16 16 chr2 7797477 7797598 -245458985 - L2 LINE L2 -4 3309 3189 314 292 60 64 chr2 7797657 7797890 -245458693 - L1M4 LINE L1 -3771 2375 2144 1164 228 49 62 chr2 7797921 7798311 -245458272 - MLT2C1 LTR ERVL -2 395 11 767 287 50 41 chr2 7798880 7799298 -245457285 - HAL1b LINE L1 -704 644 223 2111 115 3 3 chr2 7799303 7799608 -245456975 - AluSq SINE Alu -8 305 1 335 303 42 50 chr2 7800868 7801129 -245455454 + MER112 DNA MER1_type 2 260 0 26 50 0 0 chr2 7801322 7801362 -245455221 + AT_rich Low_complexity Low_complexity 1 40 0 265 283 120 0 chr2 7801411 7801503 -245455080 - MIR SINE MIR -85 123 21 3189 104 26 0 chr2 7801739 7802160 -245454423 - MER57B LTR ERV1 -2 432 1 360 247 0 12 chr2 7803347 7803428 -245453155 + L2 LINE L2 3234 3313 0 2896 135 29 0 chr2 7803569 7803983 -245452600 + MSTA LTR MaLR 2 427 -1 1620 107 21 4 chr2 7804120 7804354 -245452229 - AluSq SINE Alu -10 303 66 43 35 0 0 chr2 7804741 7804798 -245451785 + AT_rich Low_complexity Low_complexity 1 57 0 478 282 139 49 chr2 7804870 7805510 -245451073 - L2 LINE L2 -16 3297 2593 324 70 0 0 chr2 7805528 7805571 -245451012 + (CA)n Simple_repeat Simple_repeat 2 44 0 1097 177 65 140 chr2 7806664 7807049 -245449534 - MLT1B LTR MaLR 0 390 35 2558 94 6 17 chr2 7807050 7807410 -245449173 + L1PB1 LINE L1 5796 6151 0 25 0 0 0 chr2 7807894 7807919 -245448664 + AT_rich Low_complexity Low_complexity 1 25 0 269 298 128 0 chr2 7807983 7808077 -245448506 - L2 LINE L2 -2 3270 3165 2043 141 3 10 chr2 7808239 7808551 -245448032 - AluJb SINE Alu -2 310 1 222 333 39 0 chr2 7809019 7809097 -245447486 + L2 LINE L2 2878 2958 -355 239 308 31 0 chr2 7809267 7809332 -245447251 + L2 LINE L2 3246 3312 -1 449 264 71 65 chr2 7809442 7809824 -245446759 + L1 LINE L1 2648 3031 -3115 335 259 75 91 chr2 7809853 7810402 -245446181 + L1 LINE L1 3256 3789 -2357 2130 128 0 0 chr2 7810402 7810698 -245445885 + AluSg SINE Alu 1 296 -14 335 259 75 91 chr2 7810698 7810887 -245445696 + L1 LINE L1 3789 3979 -2167 228 265 59 0 chr2 7812353 7812421 -245444162 + MIR SINE MIR 106 177 -85 213 318 15 0 chr2 7812721 7812787 -245443796 + L2 LINE L2 3201 3267 -5 1571 161 63 100 chr2 7814104 7814483 -245442100 + MLT1A1 LTR MaLR 1 365 0 309 308 83 6 chr2 7815329 7815498 -245441085 - MIR SINE MIR -11 251 70 960 246 107 49 chr2 7815645 7816076 -245440507 - MLT1C LTR MaLR -3 464 9 22 0 0 0 chr2 7816400 7816422 -245440161 + AT_rich Low_complexity Low_complexity 1 22 0 1093 258 77 67 chr2 7818146 7818582 -245438001 - L1ME2 LINE L1 -208 5956 5504 2039 143 0 10 chr2 7818582 7818889 -245437694 + AluSx SINE Alu 1 304 -8 1093 258 77 67 chr2 7818889 7819133 -245437450 - L1ME2 LINE L1 -660 5504 5264 947 345 112 31 chr2 7819136 7820224 -245436359 + L2 LINE L2 2100 3272 0 206 62 31 0 chr2 7820556 7820588 -245435995 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1836 190 11 17 chr2 7822953 7823311 -245433272 + MLT1A2 LTR MaLR 8 363 -11 216 304 88 35 chr2 7823381 7823552 -245433031 + MER5A DNA MER1_type 4 183 -6 530 283 98 50 chr2 7823693 7823990 -245432593 - MER110 LTR ERV1 -14 477 167 483 250 70 0 chr2 7824073 7824229 -245432354 - MER110A LTR ERV1 -298 170 4 1410 169 51 42 chr2 7824669 7825070 -245431513 - MSTB2 LTR MaLR -2 455 1 225 0 0 0 chr2 7825787 7825812 -245430771 + (T)n Simple_repeat Simple_repeat 1 25 0 281 297 110 35 chr2 7826885 7826934 -245429649 - MIR SINE MIR -59 203 159 1436 231 136 62 chr2 7826934 7827391 -245429192 + MLT2B1 LTR ERVL 1 497 -23 216 0 0 0 chr2 7827391 7827415 -245429168 + (TG)n Simple_repeat Simple_repeat 2 25 0 1436 231 136 62 chr2 7827415 7827441 -245429142 + MLT2B1 LTR ERVL 497 520 0 281 297 110 35 chr2 7827441 7827536 -245429047 - MIR SINE MIR -103 159 48 207 0 0 0 chr2 7828646 7828669 -245427914 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 207 100 0 0 chr2 7829287 7829317 -245427266 + (A)n Simple_repeat Simple_repeat 1 30 0 349 259 123 24 chr2 7829385 7829555 -245427028 + L1ME LINE L1 5416 5602 -562 2276 78 0 0 chr2 7829588 7829903 -245426680 - AluY SINE Alu 0 315 1 275 239 245 15 chr2 7829950 7830307 -245426276 - MLT1J2 LTR MaLR -4 442 1 3347 104 57 62 chr2 7830519 7831049 -245425534 - MER1A DNA MER1_type 0 527 1 1028 126 0 48 chr2 7831284 7831451 -245425132 - L1PA11 LINE L1 -1 6173 6015 3051 54 3 0 chr2 7831452 7831825 -245424758 + L1PA10 LINE L1 5484 5857 -311 717 251 39 11 chr2 7831976 7832155 -245424428 - MER5A DNA MER1_type -2 187 4 1041 229 4 25 chr2 7832203 7832448 -245424135 - MER63B DNA MER1_type -196 240 1 296 130 74 0 chr2 7833067 7833121 -245423462 + MIR SINE MIR 118 175 -87 355 263 95 37 chr2 7834140 7834330 -245422253 - MIR SINE MIR -42 220 20 792 249 9 33 chr2 7834634 7834847 -245421736 + L1ME1 LINE L1 5954 6161 -5 445 304 73 22 chr2 7834928 7835244 -245421339 - LTR33 LTR ERVL 0 521 190 275 309 120 6 chr2 7835453 7835628 -245420955 - LTR33 LTR ERVL -324 197 3 789 346 26 17 chr2 7836008 7836352 -245420231 + L2 LINE L2 2457 2803 -511 744 178 0 22 chr2 7836353 7836488 -245420095 - FLAM_A SINE Alu -5 137 6 615 236 27 0 chr2 7836549 7836727 -245419856 + L2 LINE L2 2828 3022 -291 348 24 0 0 chr2 7836954 7836995 -245419588 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 189 18 6 chr2 7839432 7839596 -245416987 - LTR64 LTR ERVK -392 166 1 427 312 83 46 chr2 7840694 7841149 -245415434 - L1M4 LINE L1 -2875 3271 2800 823 232 32 48 chr2 7841274 7841524 -245415059 - MLT1E1 LTR MaLR -2 652 407 929 231 46 42 chr2 7841578 7841838 -245414745 - MLT1E1 LTR MaLR -389 265 5 350 223 36 45 chr2 7843167 7843500 -245413083 + L1MDa LINE L1 1125 1484 -5108 491 270 83 78 chr2 7843508 7843856 -245412727 + L1MDa LINE L1 1521 1922 -4777 2634 36 7 0 chr2 7843856 7844157 -245412426 + AluY SINE Alu 1 303 -8 491 270 83 78 chr2 7844157 7844377 -245412206 + L1MDa LINE L1 1922 2139 -4560 1856 270 116 41 chr2 7844410 7844741 -245411842 + L1M4 LINE L1 3587 3892 -2254 954 92 13 7 chr2 7844741 7844894 -245411689 + (GAAA)n Simple_repeat Simple_repeat 4 157 0 1856 270 116 41 chr2 7844894 7846060 -245410523 + L1M4 LINE L1 3892 5195 -951 374 328 47 0 chr2 7847112 7847281 -245409302 + MIR SINE MIR 25 200 -62 765 226 140 82 chr2 7847579 7848016 -245408567 + LTR37B LTR ERV1 7 468 0 2629 52 0 0 chr2 7848192 7848497 -245408086 - AluY SINE Alu -6 305 1 413 291 127 0 chr2 7849997 7850162 -245406421 + MIR SINE MIR 67 252 -10 298 285 176 57 chr2 7851821 7851923 -245404660 - L2 LINE L2 -73 3240 3152 2160 110 0 10 chr2 7851923 7852222 -245404361 + AluSg SINE Alu 9 304 -6 298 285 176 57 chr2 7852222 7852488 -245404095 - L2 LINE L2 -161 3152 2828 1045 293 140 55 chr2 7852622 7853002 -245403581 - L2 LINE L2 -710 2604 2258 1203 149 23 28 chr2 7853002 7853216 -245403367 + L1MC1 LINE L1 6121 6333 0 1045 293 140 55 chr2 7853216 7853586 -245402997 - L2 LINE L2 -1056 2258 1790 309 289 114 0 chr2 7853758 7853872 -245402711 - L2 LINE L2 -723 2591 2465 223 291 0 0 chr2 7853873 7853928 -245402655 - L2 LINE L2 -1529 1785 1731 1415 153 0 0 chr2 7853933 7854155 -245402428 + AluJo SINE Alu 91 312 0 290 274 189 11 chr2 7854164 7854339 -245402244 - L2 LINE L2 -1638 1676 1471 234 219 0 0 chr2 7854385 7854449 -245402134 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 230 335 134 12 chr2 7855172 7855336 -245401247 + MIR SINE MIR 54 237 -25 1677 87 55 0 chr2 7855337 7855555 -245401028 - MER30 DNA MER1_type 0 230 1 420 274 126 49 chr2 7855990 7856315 -245400268 + LTR52 LTR ERVL 2 351 -70 180 0 0 0 chr2 7856427 7856447 -245400136 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 193 365 56 9 chr2 7856687 7856794 -245399789 + L2 LINE L2 3167 3278 -35 198 71 0 0 chr2 7856868 7856896 -245399687 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 7856950 7856979 -245399604 + (CA)n Simple_repeat Simple_repeat 2 30 0 326 286 0 0 chr2 7857145 7857222 -245399361 + MIR SINE MIR 71 147 -115 496 327 112 11 chr2 7857512 7857781 -245398802 + MLT2F LTR ERVL 269 564 -99 597 276 164 15 chr2 7858340 7858670 -245397913 + MLT2F LTR ERVL 24 402 -261 261 0 0 0 chr2 7859712 7859741 -245396842 + (TG)n Simple_repeat Simple_repeat 2 30 0 692 276 107 31 chr2 7860193 7860502 -245396081 + MLT1C LTR MaLR 3 344 -123 263 293 0 27 chr2 7860502 7860577 -245396006 - L2 LINE L2 -36 3277 3205 207 0 0 0 chr2 7860682 7860705 -245395878 + (TA)n Simple_repeat Simple_repeat 1 23 0 3773 49 0 7 chr2 7861727 7862178 -245394405 - LTR7 LTR ERV1 -2 448 1 2676 75 45 0 chr2 7862178 7862553 -245394030 - HERVH LTR ERV1 0 7713 7322 1337 142 18 9 chr2 7862551 7862769 -245393814 - HERVH LTR ERV1 -1894 5819 5600 * 4134 142 31 2 chr2 7862770 7863413 -245393170 - HERVH LTR ERV1 -2564 5149 4488 3136 125 37 6 chr2 7863415 7863902 -245392681 - HERVH LTR ERV1 -3720 3993 3492 977 120 7 0 chr2 7863892 7864042 -245392541 - HERVH LTR ERV1 -4423 3290 3140 * 16955 101 20 19 chr2 7864036 7866582 -245390001 - HERVH LTR ERV1 -4726 2987 437 991 85 42 78 chr2 7866583 7866838 -245389745 - HERVH LTR ERV1 -7093 620 437 4478 89 5 6 chr2 7866839 7867460 -245389123 - HERVH LTR ERV1 -7093 620 1 3663 55 4 11 chr2 7867462 7867913 -245388670 - LTR7 LTR ERV1 -2 448 1 493 296 90 48 chr2 7868056 7868480 -245388103 + LTR16A LTR ERVL 1 442 -8 267 307 59 52 chr2 7868678 7868831 -245387752 + L2 LINE L2 3160 3313 0 231 253 69 35 chr2 7869611 7869698 -245386885 + MER5A DNA MER1_type 97 186 -3 266 248 90 60 chr2 7871432 7871565 -245385018 + L2 LINE L2 3136 3272 0 213 330 98 0 chr2 7872006 7872118 -245384465 + L3b LINE CR1 1121 1243 -340 506 280 78 56 chr2 7872123 7872226 -245384357 - MIR SINE MIR 0 262 163 1704 197 7 102 chr2 7872226 7872657 -245383926 + MLT1B LTR MaLR 1 390 0 506 280 78 56 chr2 7872657 7872785 -245383798 - MIR SINE MIR -99 163 26 2084 143 74 34 chr2 7872840 7873190 -245383393 + THE1B LTR MaLR 1 364 0 294 235 78 86 chr2 7873788 7874031 -245382552 - L1MC4 LINE L1 -878 7164 6924 468 293 8 0 chr2 7874063 7874196 -245382387 - MER58A DNA MER1_type -44 180 47 423 0 0 0 chr2 7874781 7874828 -245381755 + (TG)n Simple_repeat Simple_repeat 2 48 0 371 356 58 5 chr2 7874902 7875093 -245381490 + MIR SINE MIR 21 221 -41 194 289 44 104 chr2 7875217 7875352 -245381231 - MIR SINE MIR -113 149 23 226 261 171 0 chr2 7875933 7876021 -245380562 + L2 LINE L2 3169 3271 -1 488 43 159 0 chr2 7877435 7877504 -245379079 - MADE1 DNA Mariner 0 80 1 536 220 184 54 chr2 7877699 7878011 -245378572 - MLT1J2 LTR MaLR -10 440 44 377 290 48 0 chr2 7879187 7879311 -245377272 + MER94 DNA DNA 5 134 0 22 0 0 0 chr2 7879711 7879733 -245376850 + AT_rich Low_complexity Low_complexity 1 22 0 233 268 87 22 chr2 7879761 7879944 -245376639 - L1M4 LINE L1 -1006 5140 4946 337 315 124 19 chr2 7880024 7880291 -245376292 - L1M4 LINE L1 -1323 4823 4529 1223 277 36 6 chr2 7880293 7880625 -245375958 + L1M4 LINE L1 1 342 -6200 298 175 186 21 chr2 7880617 7880714 -245375869 + L1M4 LINE L1 1745 1857 -4789 * 483 298 71 60 chr2 7881068 7881631 -245374952 - L1M4 LINE L1 -1922 4224 3656 281 214 0 11 chr2 7881806 7881895 -245374688 + (TA)n Simple_repeat Simple_repeat 1 88 0 389 304 56 60 chr2 7882294 7882329 -245374254 - L1MEd LINE L1 -4949 1170 1136 1955 153 0 10 chr2 7882329 7882636 -245373947 - AluSx SINE Alu -8 304 1 389 304 56 60 chr2 7882636 7882866 -245373717 - L1MEd LINE L1 -4983 1136 906 204 273 0 0 chr2 7882907 7882951 -245373632 + (TA)n Simple_repeat Simple_repeat 2 45 0 3560 139 59 13 chr2 7882951 7883227 -245373356 + MER39B LTR ERV1 3 265 -388 2067 134 80 14 chr2 7883227 7883578 -245373005 + THE1C LTR MaLR 1 374 -1 3560 139 59 13 chr2 7883578 7883896 -245372687 + MER39B LTR ERV1 265 624 -29 2178 73 6 94 chr2 7885809 7886137 -245370446 + AluSx SINE Alu 1 299 -13 187 367 46 0 chr2 7886234 7886343 -245370240 - MIR SINE MIR -32 230 117 468 212 22 4 chr2 7886904 7887140 -245369443 + GA-rich Low_complexity Low_complexity 1 240 0 1851 161 33 3 chr2 7887744 7887869 -245368714 + AluSx SINE Alu 2 122 -190 212 0 36 0 chr2 7887869 7887897 -245368686 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1851 161 33 3 chr2 7887897 7888070 -245368513 + AluSx SINE Alu 122 309 -3 220 213 43 0 chr2 7889006 7889053 -245367530 - MIR SINE MIR -132 130 82 191 283 22 0 chr2 7889538 7889584 -245366999 - MIR3 SINE MIR -16 192 146 1605 248 102 40 chr2 7889996 7891182 -245365401 + L1ME3A LINE L1 4884 6166 -4 204 40 0 0 chr2 7893835 7893860 -245362723 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 250 245 60 73 chr2 7894823 7894988 -245361595 - MIR3 SINE MIR -11 197 36 288 0 0 0 chr2 7895504 7895536 -245361047 + (T)n Simple_repeat Simple_repeat 1 32 0 470 364 65 14 chr2 7895629 7895846 -245360737 - MIR SINE MIR -15 247 20 352 376 129 0 chr2 7896683 7896893 -245359690 + L2 LINE L2 2488 2724 -590 876 305 57 55 chr2 7897062 7897715 -245358868 + L1MC4a LINE L1 5254 5907 -1901 292 149 15 15 chr2 7897723 7897790 -245358793 + (TA)n Simple_repeat Simple_repeat 1 67 0 306 132 0 0 chr2 7897942 7897995 -245358588 + (TG)n Simple_repeat Simple_repeat 2 54 0 264 326 76 5 chr2 7898006 7898190 -245358393 - L2 LINE L2 -1506 1808 1612 2290 116 129 13 chr2 7898472 7898851 -245357732 - MSTA LTR MaLR -5 423 1 260 239 0 0 chr2 7898939 7899006 -245357577 - HERV16 LTR ERVL -83 4913 4847 360 192 27 0 chr2 7899425 7899498 -245357085 - LTR16B LTR ERVL -389 75 1 4840 221 32 7 chr2 7899641 7900655 -245355928 + MER45B DNA AcHobo 1 1040 0 1967 194 22 8 chr2 7901204 7901564 -245355019 - MLT1A1 LTR MaLR 0 365 1 2317 73 0 0 chr2 7902081 7902421 -245354162 + AluY SINE Alu 1 311 0 2214 139 0 0 chr2 7903933 7904243 -245352340 - AluSx SINE Alu -2 310 1 197 206 48 48 chr2 7904634 7904697 -245351886 + L2 LINE L2 3158 3220 -93 277 301 48 19 chr2 7904797 7904900 -245351683 + L2 LINE L2 3155 3260 -12 609 330 33 0 chr2 7905873 7906088 -245350495 + MIR SINE MIR 20 241 -21 181 337 42 60 chr2 7906167 7906333 -245350250 + MIR3 SINE MIR 37 199 -9 215 59 0 29 chr2 7906650 7906684 -245349899 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 1912 208 45 75 chr2 7906744 7907301 -245349282 - MLT1F LTR MaLR -2 540 1 290 269 41 69 chr2 7907379 7907524 -245349059 - L2 LINE L2 -853 2461 2321 1379 316 80 47 chr2 7907782 7908266 -245348317 + L2 LINE L2 2209 2676 -637 2216 90 37 7 chr2 7908266 7908566 -245348017 - AluSg SINE Alu -1 309 1 1379 316 80 47 chr2 7908566 7909144 -245347439 + L2 LINE L2 2676 3313 0 245 252 25 109 chr2 7909481 7909600 -245346983 + L2 LINE L2 3190 3298 -15 319 295 38 0 chr2 7909760 7909865 -245346718 + L1P LINE L1 3656 3764 -2382 203 243 0 0 chr2 7909866 7909903 -245346680 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 236 34 22 chr2 7909910 7909999 -245346584 + L1MC4 LINE L1 6616 6705 -1337 * 237 165 94 47 chr2 7909978 7910063 -245346520 - L1MC4 LINE L1 -1340 6702 6614 380 184 23 0 chr2 7910067 7910154 -245346429 + (CATATA)n Simple_repeat Simple_repeat 6 94 0 761 244 27 44 chr2 7910240 7910528 -245346055 + L1M4 LINE L1 4079 4360 -1786 2878 215 108 82 chr2 7910768 7911279 -245345304 + L1MC3 LINE L1 6593 7089 -696 381 243 0 0 chr2 7911279 7911353 -245345230 + MLT1F1 LTR MaLR 50 123 -444 2878 215 108 82 chr2 7911353 7911916 -245344667 + L1MC3 LINE L1 7089 7770 -15 2035 198 8 6 chr2 7911961 7912325 -245344258 - MLT1A1 LTR MaLR 0 365 1 431 322 63 51 chr2 7912338 7912973 -245343610 + L1MB3 LINE L1 3512 4154 -1992 685 207 95 12 chr2 7913001 7913170 -245343413 + MER5A DNA MER1_type 1 183 -6 361 252 92 30 chr2 7913176 7913307 -245343276 + LTR16A1 LTR ERVL 1 139 -318 843 184 13 0 chr2 7913345 7913497 -245343086 + MER2 DNA MER2_type 17 170 -175 * 965 211 48 55 chr2 7913495 7913784 -245342799 + LTR16A1 LTR ERVL 171 457 0 500 295 49 11 chr2 7913874 7914057 -245342526 - MIR SINE MIR -1 261 72 23 68 0 0 chr2 7914133 7914177 -245342406 + AT_rich Low_complexity Low_complexity 1 44 0 344 279 38 100 chr2 7914550 7914890 -245341693 + MLT1I LTR MaLR 91 409 0 996 234 114 32 chr2 7915017 7915333 -245341250 + MER2 DNA MER2_type 2 343 -2 335 291 57 60 chr2 7915346 7915546 -245341037 + L1MB3 LINE L1 5039 5239 -907 216 111 0 0 chr2 7915546 7915582 -245341001 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 291 57 60 chr2 7915582 7915714 -245340869 + L1MB3 LINE L1 5239 5370 -776 557 282 87 17 chr2 7915884 7916179 -245340404 + L1ME4a LINE L1 5613 5883 -238 428 295 77 22 chr2 7917163 7917346 -245339237 - MIR SINE MIR -58 204 12 186 43 0 0 chr2 7917571 7917594 -245338989 + (TG)n Simple_repeat Simple_repeat 1 23 0 1982 104 33 0 chr2 7917857 7918152 -245338431 + AluSg SINE Alu 1 304 0 239 256 35 47 chr2 7920643 7920729 -245335854 + MIR SINE MIR 137 221 -41 2629 132 5 3 chr2 7920826 7921198 -245335385 + THE1C LTR MaLR 1 373 -2 3500 171 53 0 chr2 7921301 7921927 -245334656 + L1MB3 LINE L1 5523 6181 -2 294 293 0 12 chr2 7922778 7922860 -245333723 + MIR SINE MIR 2 82 -180 2868 152 26 4 chr2 7924043 7924498 -245332085 - L1PA15 LINE L1 0 6165 5701 23 0 0 0 chr2 7926164 7926187 -245330396 + AT_rich Low_complexity Low_complexity 1 23 0 1230 89 157 0 chr2 7926818 7926969 -245329614 + MLT2A1 LTR ERVL 224 412 -32 806 30 10 0 chr2 7926969 7927070 -245329513 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1230 89 157 0 chr2 7927070 7927109 -245329474 + MLT2A1 LTR ERVL 412 444 0 279 0 0 0 chr2 7927581 7927612 -245328971 + (CAT)n Simple_repeat Simple_repeat 3 33 0 813 290 97 37 chr2 7927645 7928100 -245328483 - MLT1L LTR MaLR -46 569 88 475 204 350 19 chr2 7928544 7928657 -245327926 - MER63A DNA MER1_type -1479 209 135 396 0 0 0 chr2 7928657 7928701 -245327882 + (CA)n Simple_repeat Simple_repeat 2 45 0 475 204 350 19 chr2 7928701 7928744 -245327839 - MER63A DNA MER1_type -1553 135 1 217 368 135 11 chr2 7928937 7929122 -245327461 - L2 LINE L2 -235 3037 2830 1583 212 41 13 chr2 7929278 7929811 -245326772 + MER92B LTR ERV1 15 636 0 368 123 0 15 chr2 7930604 7930669 -245325914 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 412 142 115 108 chr2 7931000 7931148 -245325435 + MER53 DNA DNA 1 149 -40 267 31 0 0 chr2 7931504 7931536 -245325047 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 180 152 0 0 chr2 7933730 7933763 -245322820 + GA-rich Low_complexity Low_complexity 1 33 0 513 323 90 32 chr2 7934738 7935082 -245321501 - L2 LINE L2 -44 3269 2906 202 373 19 25 chr2 7936730 7936891 -245319692 + MIR SINE MIR 31 190 -72 294 314 48 40 chr2 7937946 7938070 -245318513 + MIR SINE MIR 20 144 -118 282 325 46 35 chr2 7938624 7938821 -245317762 - L2 LINE L2 -653 2661 2463 968 236 74 0 chr2 7940628 7940870 -245315713 + MIR SINE MIR 1 260 -2 215 266 38 13 chr2 7943475 7943554 -245313029 + MIR SINE MIR 111 191 -71 537 164 116 156 chr2 7945046 7945220 -245311363 + MER20 DNA MER1_type 1 166 -53 285 98 0 0 chr2 7945220 7945261 -245311322 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 164 116 156 chr2 7945261 7945311 -245311272 + MER20 DNA MER1_type 166 216 -3 282 358 5 27 chr2 7945324 7945511 -245311072 + MIR SINE MIR 46 228 -34 203 241 37 0 chr2 7945508 7945562 -245311021 + L2 LINE L2 3211 3266 -6 * 449 205 49 25 chr2 7946341 7946463 -245310120 + L1ME4a LINE L1 5997 6121 0 284 289 31 21 chr2 7946910 7947007 -245309576 + MIR SINE MIR 44 141 -67 2208 114 0 22 chr2 7949518 7949835 -245306748 + AluSg SINE Alu 1 310 0 199 380 53 9 chr2 7950731 7950844 -245305739 + MIR SINE MIR 36 153 -109 21 0 0 0 chr2 7951971 7951992 -245304591 + AT_rich Low_complexity Low_complexity 1 21 0 2201 135 112 0 chr2 7952590 7952975 -245303608 - MSTA LTR MaLR 0 428 1 213 302 0 0 chr2 7953095 7953148 -245303435 - MIR SINE MIR -163 99 47 218 220 9 147 chr2 7954480 7954540 -245302043 + MER5A DNA MER1_type 16 56 -133 2134 133 0 0 chr2 7954540 7954848 -245301735 + AluSx SINE Alu 3 310 -2 218 220 9 147 chr2 7954848 7954896 -245301687 + MER5A DNA MER1_type 56 109 -80 619 185 106 7 chr2 7954903 7955054 -245301529 - MER5B DNA MER1_type -12 166 1 327 265 68 0 chr2 7955208 7955340 -245301243 + MIR SINE MIR 60 200 -62 1594 158 105 31 chr2 7956700 7957023 -245299560 + MER7A DNA MER2_type 2 346 0 501 271 52 35 chr2 7957484 7957713 -245298870 - LTR67 LTR ERVL 0 557 325 280 379 26 13 chr2 7958309 7958462 -245298121 - MIR3 SINE MIR -38 170 16 748 212 67 56 chr2 7960378 7960705 -245295878 - LTR37B LTR ERV1 -7 461 91 22 0 0 0 chr2 7961295 7961317 -245295266 + AT_rich Low_complexity Low_complexity 1 22 0 1893 110 77 44 chr2 7961367 7961730 -245294853 + THE1C LTR MaLR 1 375 0 261 83 0 0 chr2 7963462 7963498 -245293085 + (CA)n Simple_repeat Simple_repeat 1 36 0 198 340 21 11 chr2 7964467 7964561 -245292022 + MIR SINE MIR 60 154 -108 1104 238 79 0 chr2 7966231 7966496 -245290087 - MER58B DNA MER1_type 0 341 56 232 213 13 27 chr2 7966659 7966734 -245289849 + (TGAA)n Simple_repeat Simple_repeat 1 74 0 208 341 145 15 chr2 7968234 7968432 -245288151 + MIR3 SINE MIR 21 241 -21 1201 118 82 282 chr2 7968432 7968967 -245287616 - MSTA LTR MaLR 0 428 1 4172 146 50 21 chr2 7969155 7969918 -245286665 + LTR1 LTR ERV1 1 785 0 247 361 62 0 chr2 7970620 7970750 -245285833 - MIR SINE MIR -105 157 20 3528 176 30 11 chr2 7970751 7971505 -245285078 + L1MA9 LINE L1 4242 5010 -1136 5163 190 18 9 chr2 7971745 7972519 -245284064 + L1MA9 LINE L1 5002 5768 -544 222 37 0 0 chr2 7972519 7972546 -245284037 + (CA)n Simple_repeat Simple_repeat 2 28 0 5163 190 18 9 chr2 7972546 7972809 -245283774 + L1MA9 LINE L1 5768 6027 -285 1480 196 28 39 chr2 7972809 7973145 -245283438 + AluJo SINE Alu 1 333 0 5163 190 18 9 chr2 7973145 7973405 -245283178 + L1MA9 LINE L1 6027 6311 -1 204 325 165 21 chr2 7974001 7974389 -245282194 + L2 LINE L2 2454 2897 -417 254 265 29 0 chr2 7974389 7974457 -245282126 + CT-rich Low_complexity Low_complexity 2 71 0 190 357 56 32 chr2 7974488 7974737 -245281846 + L2 LINE L2 2945 3199 -73 315 294 43 37 chr2 7974927 7975090 -245281493 + MIR SINE MIR 35 198 -64 1673 190 73 38 chr2 7975440 7975819 -245280764 - MLT1C LTR MaLR 0 467 72 1320 219 76 28 chr2 7975819 7976176 -245280407 + MLT1A2 LTR MaLR 1 374 0 1673 190 73 38 chr2 7976176 7976191 -245280392 - MLT1C LTR MaLR -395 72 59 3575 70 4 7 chr2 7976198 7976652 -245279931 + MLT2A2 LTR ERVL 1 453 0 192 296 0 0 chr2 7977717 7977771 -245278812 - L2 LINE L2 0 3272 3219 365 265 11 99 chr2 7977838 7978019 -245278564 + MIR SINE MIR 62 226 -36 290 68 0 23 chr2 7978122 7978166 -245278417 - MADE1 DNA Mariner -37 43 1 198 0 0 0 chr2 7978670 7978692 -245277891 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 232 326 32 0 chr2 7979428 7979523 -245277060 + MIR SINE MIR 43 140 -68 221 281 37 49 chr2 7981640 7981722 -245274861 - L2 LINE L2 0 3272 3192 505 299 23 37 chr2 7982389 7982632 -245273951 + MIR SINE MIR 18 253 -9 1214 254 100 33 chr2 7982887 7983353 -245273230 - MER21B LTR ERV1 -97 834 294 374 212 0 0 chr2 7983426 7983492 -245273091 - MER21B LTR ERV1 -785 78 13 277 284 110 19 chr2 7985775 7985930 -245270653 - MLT1L LTR MaLR -10 605 437 457 314 53 16 chr2 7986305 7986493 -245270090 - MIR SINE MIR -22 240 46 2506 57 3 0 chr2 7986885 7987183 -245269400 + AluY SINE Alu 1 299 -12 180 289 113 10 chr2 7987474 7987571 -245269012 + MIR SINE MIR 106 212 -50 212 316 54 65 chr2 7988279 7988447 -245268136 + MIR3 SINE MIR 16 181 -27 1177 42 0 0 chr2 7988448 7988590 -245267993 + L1PA5 LINE L1 6013 6154 0 318 282 0 0 chr2 7989209 7989351 -245267232 + (CA)n Simple_repeat Simple_repeat 2 143 0 362 282 30 39 chr2 7990213 7990372 -245266211 - MIR SINE MIR -63 145 23 1407 212 43 54 chr2 7990707 7990875 -245265708 + MLT1A2 LTR MaLR 1 169 -205 2156 125 7 0 chr2 7990875 7991179 -245265404 + AluSq SINE Alu 1 306 -7 1407 212 43 54 chr2 7991179 7991382 -245265201 + MLT1A2 LTR MaLR 169 368 -6 275 247 26 39 chr2 7991516 7991593 -245264990 - MER58B DNA MER1_type 0 341 266 190 308 125 27 chr2 7992229 7992424 -245264159 - MIR SINE MIR -6 256 46 213 132 0 0 chr2 7992994 7993032 -245263551 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 300 273 7 chr2 7993913 7994063 -245262520 - MIR SINE MIR -41 221 32 1309 166 12 104 chr2 7994169 7994351 -245262232 - AluJo SINE Alu -2 310 113 243 0 0 0 chr2 7994351 7994378 -245262205 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2692 16 0 0 chr2 7994380 7994686 -245261897 - AluYb8 SINE Alu -12 306 1 1309 166 12 104 chr2 7994686 7994837 -245261746 - AluJo SINE Alu -200 112 5 37 62 0 0 chr2 7995186 7995251 -245261332 + AT_rich Low_complexity Low_complexity 1 65 0 320 230 0 10 chr2 7995552 7995652 -245260931 + CT-rich Low_complexity Low_complexity 2 100 0 1495 217 40 40 chr2 7995905 7996279 -245260304 + MLT1A2 LTR MaLR 1 374 0 696 342 44 44 chr2 7996345 7996781 -245259802 + L2 LINE L2 2836 3271 -1 759 244 72 29 chr2 7996812 7997343 -245259240 - MLT1E1 LTR MaLR -2 652 1 334 353 30 18 chr2 7997428 7997595 -245258988 + MIR SINE MIR 65 233 -29 183 42 0 0 chr2 7997794 7997818 -245258765 + (A)n Simple_repeat Simple_repeat 1 24 0 1052 248 9 0 chr2 7999192 7999414 -245257169 - MLT1A1 LTR MaLR 0 365 142 1230 203 130 20 chr2 8000217 8000562 -245256021 - MLT1B LTR MaLR -4 386 4 333 321 125 22 chr2 8001179 8001403 -245255180 + LTR16A LTR ERVL 115 361 -89 952 330 54 39 chr2 8002291 8002863 -245253720 + HERV16 LTR ERVL 991 1571 -3425 1028 291 44 47 chr2 8003052 8003901 -245252682 + L1M4 LINE L1 2131 2976 -3170 1171 89 0 56 chr2 8003936 8004094 -245252489 - L1PB1 LINE L1 -207 5944 5796 207 0 0 0 chr2 8004094 8004117 -245252466 + (CA)n Simple_repeat Simple_repeat 2 24 0 1171 89 0 56 chr2 8004117 8004137 -245252446 - L1PB1 LINE L1 -355 5796 5776 393 107 47 33 chr2 8004150 8004300 -245252283 + (TA)n Simple_repeat Simple_repeat 1 152 0 253 57 23 68 chr2 8004335 8004423 -245252160 + (TA)n Simple_repeat Simple_repeat 2 85 0 2047 88 35 0 chr2 8004427 8004712 -245251871 - L1PB1 LINE L1 -360 5791 5497 380 349 50 43 chr2 8004785 8005043 -245251540 + L2 LINE L2 3005 3264 -8 412 274 11 86 chr2 8005665 8005840 -245250743 - MIR3 SINE MIR -27 181 20 204 40 0 0 chr2 8006418 8006443 -245250140 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 278 358 50 11 chr2 8007509 8007688 -245248895 + MIR3 SINE MIR 14 199 -9 510 203 0 0 chr2 8008573 8008691 -245247892 + (TG)n Simple_repeat Simple_repeat 1 118 0 548 302 131 34 chr2 8009842 8010110 -245246473 - MER115 DNA AcHobo -398 295 2 228 182 0 0 chr2 8011500 8011544 -245245039 + MIR SINE MIR 84 127 -135 2266 114 76 15 chr2 8011986 8012329 -245244254 + THE1B LTR MaLR 1 364 0 258 95 0 0 chr2 8012750 8012792 -245243791 + (TG)n Simple_repeat Simple_repeat 2 43 0 235 316 68 34 chr2 8013859 8014036 -245242547 - MIR SINE MIR -77 185 3 466 257 56 78 chr2 8016299 8016767 -245239816 + MLT1F1 LTR MaLR 17 537 -5 231 317 39 65 chr2 8018781 8018955 -245237628 + MIR SINE MIR 5 171 -62 184 293 35 0 chr2 8019617 8019675 -245236908 - L2 LINE L2 -18 3254 3195 672 295 78 4 chr2 8020437 8020681 -245235902 - MLT1C LTR MaLR -2 465 204 1398 141 90 31 chr2 8021169 8021274 -245235309 + AluSp SINE Alu 10 107 -206 2145 88 3 26 chr2 8021274 8021579 -245235004 + AluY SINE Alu 1 298 -13 1398 141 90 31 chr2 8021579 8021729 -245234854 + AluSp SINE Alu 107 280 -33 22 0 0 0 chr2 8021749 8021771 -245234812 + AT_rich Low_complexity Low_complexity 1 22 0 410 318 218 45 chr2 8022081 8022594 -245233989 + L1MC4a LINE L1 5255 5856 -1952 557 365 44 6 chr2 8022619 8022940 -245233643 - MLT1J1 LTR MaLR -43 403 71 396 141 125 0 chr2 8023517 8023581 -245233002 - FRAM/FAM SINE Alu -95 71 1 509 225 73 22 chr2 8024045 8024189 -245232394 - MLT1J2 LTR MaLR -289 161 18 200 173 39 58 chr2 8024312 8024364 -245232219 + GA-rich Low_complexity Low_complexity 4 54 0 248 130 22 0 chr2 8024693 8024739 -245231844 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2411 120 40 0 chr2 8025961 8026310 -245230273 - THE1B LTR MaLR -1 363 1 251 298 28 61 chr2 8026524 8026700 -245229883 + MIR SINE MIR 34 206 -2 33 56 0 0 chr2 8026709 8026763 -245229820 + AT_rich Low_complexity Low_complexity 1 54 0 248 270 50 20 chr2 8026885 8026985 -245229598 + MIR SINE MIR 18 120 -142 226 260 30 80 chr2 8026989 8027089 -245229494 + MIR SINE MIR 89 183 -79 239 294 198 23 chr2 8029465 8029642 -245226941 - L2 LINE L2 -4 3309 3102 3698 30 0 0 chr2 8029814 8030244 -245226339 - L1PA2 LINE L1 0 6155 5726 4184 11 0 0 chr2 8030244 8030745 -245225838 + L1PA2 LINE L1 5221 5721 -434 350 161 23 35 chr2 8030974 8031061 -245225522 + L1MEc LINE L1 2232 2317 -4079 360 282 15 8 chr2 8031132 8031263 -245225320 + L1MCc LINE L1 27 158 -6265 308 294 147 49 chr2 8031364 8031629 -245224954 + L1MCc LINE L1 298 588 -5835 403 195 25 93 chr2 8031755 8031873 -245224710 + L1MCc LINE L1 818 927 -5496 1477 231 46 3 chr2 8032573 8032902 -245223681 + MLT1A1 LTR MaLR 1 343 -22 250 184 41 0 chr2 8032902 8032951 -245223632 + MLT1A1 LTR MaLR 315 365 0 190 292 22 56 chr2 8033500 8033589 -245222994 + MIR3 SINE MIR 89 174 -34 1095 332 125 29 chr2 8033592 8034909 -245221674 + L2 LINE L2 1830 3272 0 335 326 88 21 chr2 8034950 8035143 -245221440 + MIR3 SINE MIR 2 207 -1 1047 166 42 0 chr2 8035575 8035768 -245220815 + MER3 DNA MER1_type 9 209 0 2202 160 35 38 chr2 8036367 8036913 -245219670 + MLT2A2 LTR ERVL 1 551 -3 414 0 0 0 chr2 8036913 8036959 -245219624 + (CA)n Simple_repeat Simple_repeat 2 47 0 249 159 0 0 chr2 8039131 8039175 -245217408 + (TA)n Simple_repeat Simple_repeat 1 44 0 204 135 0 0 chr2 8039174 8039211 -245217372 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 528 253 38 26 chr2 8039216 8039443 -245217140 - L1MD3 LINE L1 -1359 6683 6443 1131 123 0 0 chr2 8039524 8039686 -245216897 + MLT2B2 LTR ERVL 2 163 -352 1962 140 143 11 chr2 8039832 8040210 -245216373 + MSTA LTR MaLR 1 428 0 186 125 143 18 chr2 8040304 8040360 -245216223 + MER5C DNA MER1_type 237 299 -25 27 81 0 0 chr2 8040461 8040523 -245216060 + AT_rich Low_complexity Low_complexity 1 62 0 2791 194 22 2 chr2 8040995 8041505 -245215078 - MLT2B1 LTR ERVL 0 520 1 1560 243 102 49 chr2 8041601 8042189 -245214394 + L1MC4 LINE L1 6468 7086 -956 1081 280 98 22 chr2 8042320 8042727 -245213856 + L1MC4 LINE L1 7464 7901 -141 227 216 0 0 chr2 8042731 8042782 -245213801 + L1MC4 LINE L1 7990 8040 -2 2236 105 6 10 chr2 8044660 8044973 -245211610 + AluSx SINE Alu 1 312 0 4195 195 20 5 chr2 8045112 8046665 -245209918 - L1MA9 LINE L1 -14 6298 4536 287 220 0 0 chr2 8046677 8046736 -245209847 - L1MA9 LINE L1 -2494 3652 3594 1364 248 28 55 chr2 8046902 8047301 -245209282 - MLT1E LTR MaLR 0 593 206 216 111 0 0 chr2 8047330 8047366 -245209217 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 213 0 0 chr2 8047366 8047413 -245209170 - MLT1E LTR MaLR -491 163 117 340 239 0 54 chr2 8047999 8048091 -245208492 + L2 LINE L2 3186 3272 0 235 291 0 0 chr2 8048757 8048812 -245207771 + CT-rich Low_complexity Low_complexity 2 56 0 382 296 113 31 chr2 8048878 8049037 -245207546 + MIR3 SINE MIR 5 176 -32 361 299 54 65 chr2 8049793 8049977 -245206606 - MIR SINE MIR -56 206 25 1569 233 55 17 chr2 8050423 8050843 -245205740 + MER63B DNA MER1_type 1 436 0 2224 273 137 30 chr2 8051590 8052587 -245203996 - HAL1 LINE L1 -7 2500 1397 197 267 0 0 chr2 8052696 8052741 -245203842 + MIR SINE MIR 107 151 -111 369 183 0 0 chr2 8052879 8052950 -245203633 - AluJ/FRAM SINE Alu 0 302 232 2410 308 67 25 chr2 8052970 8053592 -245202991 - HAL1 LINE L1 -1189 1318 724 2363 127 36 28 chr2 8053592 8053953 -245202630 - THE1B LTR MaLR 0 364 1 2410 308 67 25 chr2 8053953 8054593 -245201990 - HAL1 LINE L1 -1783 724 3 1648 200 7 0 chr2 8054845 8055155 -245201428 + AluJo SINE Alu 1 312 0 2219 104 0 20 chr2 8055214 8055513 -245201070 + AluSc SINE Alu 1 293 -16 216 0 0 0 chr2 8055607 8055631 -245200952 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 1252 188 31 100 chr2 8056093 8056249 -245200334 + MLT1B LTR MaLR 21 186 -204 1916 133 20 20 chr2 8056249 8056550 -245200033 + AluSg SINE Alu 1 301 -9 1252 188 31 100 chr2 8056550 8056782 -245199801 + MLT1B LTR MaLR 186 382 -8 549 278 80 6 chr2 8057793 8057969 -245198614 + Charlie1 DNA MER1_type 1 189 -2572 2203 93 33 0 chr2 8058031 8058332 -245198251 + AluY SINE Alu 1 311 0 249 98 0 157 chr2 8058332 8058383 -245198200 - U6 snRNA snRNA -1 106 64 473 278 15 0 chr2 8058383 8058516 -245198067 + Charlie1 DNA MER1_type 2626 2760 -1 21 36 0 0 chr2 8059062 8059090 -245197493 + AT_rich Low_complexity Low_complexity 1 28 0 1535 184 0 21 chr2 8059204 8059487 -245197096 - AluJo SINE Alu -33 279 3 21 0 0 0 chr2 8059838 8059859 -245196724 + AT_rich Low_complexity Low_complexity 1 21 0 305 216 53 88 chr2 8060061 8060232 -245196351 + L1ME4a LINE L1 5260 5424 -2384 311 288 194 0 chr2 8060448 8060587 -245195996 + MIR SINE MIR 84 249 -13 342 0 0 0 chr2 8060604 8060642 -245195941 + (TG)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 8060641 8060670 -245195913 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1956 118 0 15 chr2 8060675 8060947 -245195636 - AluSx SINE Alu -44 268 1 228 67 0 0 chr2 8062363 8062393 -245194190 + (T)n Simple_repeat Simple_repeat 1 30 0 694 263 99 65 chr2 8063497 8064052 -245192531 + L1ME4a LINE L1 5524 6097 -24 2203 101 3 10 chr2 8064327 8064625 -245191958 + AluSx SINE Alu 1 296 -16 1741 169 3 3 chr2 8064949 8065239 -245191344 + AluJb SINE Alu 7 296 -16 2503 131 28 17 chr2 8065942 8066302 -245190281 - THE1B LTR MaLR 0 364 1 2576 47 3 31 chr2 8066417 8066735 -245189848 - AluY SINE Alu -2 309 1 626 266 7 26 chr2 8066868 8067022 -245189561 + MER45A DNA AcHobo 3 153 -25 1653 262 43 15 chr2 8068446 8069060 -245187523 - L1MD3 LINE L1 -10 7985 7258 256 50 75 0 chr2 8069067 8069107 -245187476 - L1MA1 LINE L1 0 6302 6260 314 105 88 0 chr2 8069109 8069166 -245187417 + L1MA2 LINE L1 6225 6286 -18 755 284 74 40 chr2 8069195 8069651 -245186932 - L1ME1 LINE L1 -264 5902 5407 364 298 34 58 chr2 8070354 8070562 -245186021 + MIR SINE MIR 59 261 -1 2099 66 7 42 chr2 8070594 8070880 -245185703 + AluSp SINE Alu 1 276 -37 321 339 54 0 chr2 8071066 8071196 -245185387 + L2 LINE L2 3133 3269 -3 199 269 19 0 chr2 8073042 8073094 -245183489 + L2 LINE L2 3242 3294 -19 235 349 42 12 chr2 8073131 8073297 -245183286 - MIR SINE MIR -4 258 88 297 0 0 0 chr2 8073338 8073371 -245183212 + (CA)n Simple_repeat Simple_repeat 2 34 0 2228 114 3 0 chr2 8073450 8073747 -245182836 - AluSx SINE Alu -14 298 1 182 312 101 43 chr2 8073986 8074124 -245182459 - L2 LINE L2 0 3272 3127 3755 160 13 61 chr2 8074257 8074672 -245181911 - L1MA10 LINE L1 -3 6331 5967 1846 177 0 16 chr2 8074672 8074989 -245181594 - AluJb SINE Alu 0 312 1 3755 160 13 61 chr2 8074989 8075329 -245181254 - L1MA10 LINE L1 -367 5967 5612 310 121 30 0 chr2 8075976 8076042 -245180541 + CT-rich Low_complexity Low_complexity 2 69 0 378 42 0 0 chr2 8076044 8076092 -245180491 + (CA)n Simple_repeat Simple_repeat 1 48 0 250 270 176 0 chr2 8079187 8079261 -245177322 + L2 LINE L2 3186 3272 0 254 296 12 0 chr2 8079261 8079342 -245177241 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 624 328 129 13 chr2 8079405 8080009 -245176574 + L2 LINE L2 2141 2814 -500 285 284 119 34 chr2 8080081 8080257 -245176326 + L2 LINE L2 2890 3080 -192 514 106 0 32 chr2 8080928 8080944 -245175639 + (GAAA)n Simple_repeat Simple_repeat 2 17 -75 1132 189 242 4 chr2 8080944 8081188 -245175395 + AluJb SINE Alu 1 302 0 514 106 0 32 chr2 8081188 8081265 -245175318 + (GAAA)n Simple_repeat Simple_repeat 17 92 0 281 328 53 8 chr2 8081547 8081678 -245174905 - MIR3 SINE MIR -61 147 11 2212 105 0 16 chr2 8081860 8082164 -245174419 - AluSx SINE Alu -13 299 1 675 234 34 34 chr2 8082619 8082826 -245173757 + L1ME LINE L1 5516 5719 -402 227 57 29 0 chr2 8083086 8083121 -245173462 + L1ME4a LINE L1 6085 6120 -1 198 304 76 13 chr2 8084178 8084257 -245172326 - MER5A DNA MER1_type -51 138 55 1258 316 113 14 chr2 8084433 8085088 -245171495 + L3 LINE CR1 615 1334 -243 216 328 59 51 chr2 8085135 8085391 -245171192 + L2 LINE L2 2844 3101 -171 215 204 0 0 chr2 8085511 8085555 -245171028 + GA-rich Low_complexity Low_complexity 1 44 0 3816 185 36 30 chr2 8086289 8087132 -245169451 + L1MB7 LINE L1 5337 6184 0 294 301 21 129 chr2 8089012 8089298 -245167285 - L2 LINE L2 -4 3268 3014 381 271 114 43 chr2 8089658 8089939 -245166644 - L1M4 LINE L1 -1771 4375 4075 24 53 0 0 chr2 8090307 8090345 -245166238 + AT_rich Low_complexity Low_complexity 1 38 0 226 416 112 0 chr2 8090351 8090476 -245166107 + L2 LINE L2 3134 3272 0 2795 197 18 9 chr2 8093196 8093745 -245162838 + MER89 LTR ERV1 4 557 -2 245 297 27 0 chr2 8094627 8094701 -245161882 + CT-rich Low_complexity Low_complexity 1 76 0 510 277 15 8 chr2 8095095 8095225 -245161358 + MER94 DNA DNA 3 133 -1 4119 112 30 11 chr2 8096054 8096677 -245159906 + MER41B LTR ERV1 1 635 0 2978 215 88 110 chr2 8097615 8098869 -245157714 + MER69B DNA AcHobo 1 1226 0 687 251 52 11 chr2 8099483 8099674 -245156909 - MLT2B1 LTR ERVL -3 517 319 1796 202 17 17 chr2 8099692 8100053 -245156530 + MLT1A2 LTR MaLR 14 374 0 1283 212 7 15 chr2 8100123 8100392 -245156191 - MLT2B1 LTR ERVL -253 267 1 1640 209 33 22 chr2 8100626 8100994 -245155589 - MLT1A2 LTR MaLR 0 374 3 13669 139 36 46 chr2 8101207 8103515 -245153068 + Tigger1 DNA MER2_type 14 2297 -121 1910 115 70 0 chr2 8103515 8103785 -245152798 + AluSx SINE Alu 9 297 -15 13669 139 36 46 chr2 8103785 8103906 -245152677 + Tigger1 DNA MER2_type 2297 2418 0 196 284 75 0 chr2 8104314 8104381 -245152202 + MIR3 SINE MIR 114 185 -23 186 380 70 6 chr2 8105743 8105914 -245150669 - MIR SINE MIR -80 182 1 2065 92 4 0 chr2 8106196 8106457 -245150126 + AluSq SINE Alu 36 297 -16 194 62 31 0 chr2 8106682 8106714 -245149869 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 309 174 0 0 chr2 8107867 8107936 -245148647 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 208 298 83 24 chr2 8107955 8108039 -245148544 - MIR SINE MIR -70 192 104 333 322 65 37 chr2 8112111 8112325 -245144258 - MIR SINE MIR -11 251 32 2910 19 0 0 chr2 8112940 8113257 -245143326 - AluYb8 SINE Alu -1 317 1 530 223 30 81 chr2 8113306 8113442 -245143141 - MER112 DNA MER1_type -7 253 128 885 241 39 0 chr2 8113442 8113649 -245142934 + MER20 DNA MER1_type 4 218 -1 530 223 30 81 chr2 8113649 8113709 -245142874 - MER112 DNA MER1_type -132 128 67 228 35 0 0 chr2 8113829 8113858 -245142725 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 213 0 80 chr2 8114194 8114269 -245142314 - MIR SINE MIR -78 184 116 303 244 24 0 chr2 8115492 8115574 -245141009 + L2 LINE L2 3133 3216 -56 209 195 0 0 chr2 8115660 8115701 -245140882 + L2 LINE L2 3265 3305 -8 229 169 28 84 chr2 8115754 8115825 -245140758 + L2 LINE L2 3201 3267 -5 32499 31 4 0 chr2 8116362 8120975 -245135608 + L1PA3 LINE L1 1527 6155 0 472 147 13 0 chr2 8121227 8121302 -245135281 - MER58 DNA MER1_type 0 2420 2345 259 175 18 53 chr2 8121330 8121387 -245135196 - MER58 DNA MER1_type -157 58 4 218 288 0 0 chr2 8121926 8121985 -245134598 + MIR SINE MIR 71 129 -133 21 0 0 0 chr2 8122807 8122828 -245133755 + AT_rich Low_complexity Low_complexity 1 21 0 183 271 35 35 chr2 8122833 8122918 -245133665 - MIR SINE MIR -102 160 76 294 29 0 0 chr2 8123118 8123153 -245133430 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 8124418 8124440 -245132143 + AT_rich Low_complexity Low_complexity 1 22 0 1673 167 27 27 chr2 8125143 8125443 -245131140 + AluJo SINE Alu 1 300 -12 380 301 92 10 chr2 8125767 8125963 -245130620 + MIR SINE MIR 13 224 -38 449 283 7 0 chr2 8126051 8126196 -245130387 - MER117 DNA MER1_type -47 150 5 410 286 8 0 chr2 8127058 8127177 -245129406 + MIR SINE MIR 114 233 -29 1403 137 24 9 chr2 8127548 8127975 -245128608 + LTR54 LTR ERV1 2 510 0 397 175 19 0 chr2 8127978 8128081 -245128502 + (CA)n Simple_repeat Simple_repeat 2 106 0 662 277 59 4 chr2 8128622 8128860 -245127723 + MIR SINE MIR 3 253 -9 1079 137 0 120 chr2 8128934 8129168 -245127415 + L1MB5 LINE L1 5963 6168 -6 185 196 20 0 chr2 8129171 8129222 -245127361 + GA-rich Low_complexity Low_complexity 1 52 0 214 279 0 15 chr2 8129797 8129865 -245126718 + A-rich Low_complexity Low_complexity 2 68 0 226 205 72 48 chr2 8131585 8131668 -245124915 - L3 LINE CR1 -1 1576 1492 182 332 45 65 chr2 8132182 8132381 -245124202 - L2 LINE L2 -18 3254 3060 2096 128 155 13 chr2 8134379 8134754 -245121829 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr2 8134919 8134941 -245121642 + AT_rich Low_complexity Low_complexity 1 22 0 267 303 0 13 chr2 8135973 8136049 -245120534 - MIR SINE MIR -26 236 162 297 129 32 32 chr2 8136052 8136114 -245120469 - MLT2B1 LTR ERVL 0 520 459 232 271 12 24 chr2 8136114 8136199 -245120384 - L1MC4 LINE L1 -1345 6697 6614 491 270 6 0 chr2 8136200 8136374 -245120209 + (TA)n Simple_repeat Simple_repeat 1 175 0 342 0 0 0 chr2 8136405 8136443 -245120140 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 196 39 0 chr2 8136444 8136495 -245120088 + MLT2B1 LTR ERVL 468 520 0 242 271 59 0 chr2 8136682 8136767 -245119816 - L1MC4 LINE L1 -1339 6703 6614 244 160 40 0 chr2 8136806 8136856 -245119727 + MLT2B1 LTR ERVL 464 515 -5 288 253 0 13 chr2 8136861 8136940 -245119643 + MIR SINE MIR 159 236 -26 2410 150 7 6 chr2 8136983 8137367 -245119216 - MLT2D LTR ERVL -40 480 1 366 327 32 6 chr2 8137367 8137523 -245119060 - MIR SINE MIR -99 163 4 186 236 0 0 chr2 8137817 8137872 -245118711 + (TG)n Simple_repeat Simple_repeat 1 55 0 361 347 40 6 chr2 8138041 8138217 -245118366 + MIR SINE MIR 47 228 -34 1913 147 10 10 chr2 8138354 8138646 -245117937 + AluSx SINE Alu 1 292 -20 2214 218 23 14 chr2 8140067 8140549 -245116034 + L1MB5 LINE L1 5663 6139 -41 2186 86 0 7 chr2 8140549 8140827 -245115756 + AluY SINE Alu 1 276 -35 270 0 0 0 chr2 8140832 8140862 -245115721 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2214 218 23 14 chr2 8140862 8140902 -245115681 + L1MB5 LINE L1 6142 6180 0 587 270 110 5 chr2 8141204 8141404 -245115179 - Charlie8 DNA MER1_type -2193 224 4 1187 262 52 37 chr2 8141893 8142377 -245114206 - LTR53 LTR ERVL -8 511 21 448 280 54 18 chr2 8142756 8142924 -245113659 - MIR SINE MIR -61 201 28 252 0 0 0 chr2 8143213 8143241 -245113342 + (TA)n Simple_repeat Simple_repeat 2 29 0 284 277 69 10 chr2 8144154 8144255 -245112328 + MIR SINE MIR 112 218 -44 2294 134 22 3 chr2 8144272 8144629 -245111954 + THE1B LTR MaLR 1 364 0 613 265 23 55 chr2 8144675 8144932 -245111651 - MIR SINE MIR 0 262 14 362 247 11 0 chr2 8144988 8145081 -245111502 - MIR SINE MIR -74 188 95 642 224 21 0 chr2 8145158 8145301 -245111282 + MIR SINE MIR 20 165 -97 186 43 0 0 chr2 8145334 8145357 -245111226 + (TAA)n Simple_repeat Simple_repeat 2 24 0 244 222 137 43 chr2 8145410 8145527 -245111056 + MER5A DNA MER1_type 9 136 -53 244 340 21 0 chr2 8146097 8146194 -245110389 - MER5A DNA MER1_type -5 184 86 2150 178 63 25 chr2 8146196 8146459 -245110124 - MLT1C LTR MaLR -1 466 178 348 24 0 0 chr2 8146459 8146500 -245110083 + (TG)n Simple_repeat Simple_repeat 2 42 0 2150 178 63 25 chr2 8146500 8146679 -245109904 - MLT1C LTR MaLR -289 178 7 191 59 0 59 chr2 8147048 8147082 -245109501 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 360 0 0 0 chr2 8150507 8150547 -245106036 + (CA)n Simple_repeat Simple_repeat 1 40 0 2443 53 0 16 chr2 8150576 8150879 -245105704 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 8150937 8150958 -245105625 + AT_rich Low_complexity Low_complexity 1 21 0 1176 137 0 0 chr2 8151976 8152144 -245104439 - AluSg/x SINE Alu -8 304 137 2275 114 3 0 chr2 8152438 8152746 -245103837 - AluSp SINE Alu -4 309 1 425 87 159 0 chr2 8154745 8154814 -245101769 + MADE1 DNA Mariner 1 80 0 862 165 0 0 chr2 8155466 8155599 -245100984 + FLAM_C SINE Alu 6 138 -5 2208 106 3 3 chr2 8156226 8156528 -245100055 - AluSp SINE Alu -11 302 1 350 274 21 17 chr2 8157015 8157214 -245099369 - L1ME4a LINE L1 -188 5933 5698 376 369 122 4 chr2 8157342 8157597 -245098986 - L3 LINE CR1 -864 713 429 206 62 31 0 chr2 8157749 8157781 -245098802 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 207 265 0 29 chr2 8158634 8158702 -245097881 - MIR SINE MIR 0 262 197 2067 132 35 6 chr2 8158706 8159017 -245097566 - MER2 DNA MER2_type -5 340 21 644 265 24 12 chr2 8159026 8159192 -245097391 - MIR SINE MIR -88 174 7 196 260 73 52 chr2 8159268 8159364 -245097219 - MIR SINE MIR -163 99 2 245 302 137 40 chr2 8160485 8160550 -245096033 - MIR SINE MIR 0 262 205 321 26 0 0 chr2 8160550 8160588 -245095995 + (TG)n Simple_repeat Simple_repeat 2 39 0 245 302 137 40 chr2 8160588 8160729 -245095854 - MIR SINE MIR -57 205 39 229 326 102 17 chr2 8162534 8162670 -245093913 + MIR3 SINE MIR 35 189 -19 364 322 66 61 chr2 8162867 8163324 -245093259 + L1M4 LINE L1 4818 5276 -870 6939 208 69 44 chr2 8163348 8165285 -245091298 + L1MDa LINE L1 311 2295 -4245 302 212 0 212 chr2 8165321 8165457 -245091126 + L1MDa LINE L1 2956 3029 -3511 2529 83 0 0 chr2 8165457 8165770 -245090813 - AluSq SINE Alu 0 313 1 302 212 0 212 chr2 8165770 8165855 -245090728 + L1MDa LINE L1 3029 3130 -3410 265 107 18 36 chr2 8165857 8165913 -245090670 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 1808 289 47 7 chr2 8165926 8166643 -245089940 + L1MDa LINE L1 3134 3879 -2661 711 242 50 0 chr2 8166673 8166834 -245089749 + L1MD1 LINE L1 6055 6223 -19 618 265 52 45 chr2 8167011 8167415 -245089168 + L1MEc LINE L1 801 1207 -5356 1033 164 61 5 chr2 8167427 8167641 -245088942 + AluJb SINE Alu 86 311 -1 262 304 44 0 chr2 8167670 8167805 -245088778 + L1MEc LINE L1 1246 1386 -5177 1596 263 72 63 chr2 8167822 8167952 -245088631 + L1MEc LINE L1 1334 1461 -4921 1507 164 33 18 chr2 8167952 8168227 -245088356 + AluSq SINE Alu 23 301 -12 1596 263 72 63 chr2 8168227 8169340 -245087243 + L1MEc LINE L1 1461 2701 -3681 30611 33 0 1 chr2 8169346 8173725 -245082858 + L1PA4 LINE L1 1777 6152 -3 3827 231 42 35 chr2 8173740 8174992 -245081591 + L1MEc LINE L1 2709 3969 -2413 192 158 0 0 chr2 8175253 8175291 -245081292 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 8175502 8175523 -245081060 + AT_rich Low_complexity Low_complexity 1 21 0 182 203 108 54 chr2 8175674 8175748 -245080835 + MIR SINE MIR 112 189 -73 2153 74 15 4 chr2 8175781 8176052 -245080531 - AluSc SINE Alu -7 302 29 735 285 45 4 chr2 8176149 8176395 -245080188 + MIR SINE MIR 3 258 -4 409 317 94 6 chr2 8176898 8177078 -245079505 + MIR SINE MIR 53 248 -14 25 0 0 0 chr2 8177531 8177556 -245079027 + AT_rich Low_complexity Low_complexity 1 25 0 1008 72 0 226 chr2 8177653 8177874 -245078709 - Charlie3 DNA MER1_type -8 2702 2532 321 322 72 90 chr2 8177922 8178267 -245078316 - L1MEd LINE L1 -5769 350 12 23 0 0 0 chr2 8178287 8178310 -245078273 + AT_rich Low_complexity Low_complexity 1 23 0 281 233 189 83 chr2 8178524 8178704 -245077879 - MLT1J LTR MaLR -189 322 124 280 271 90 14 chr2 8179267 8179411 -245077172 - HAL1b LINE L1 -511 837 683 298 236 36 0 chr2 8179411 8179521 -245077062 + CT-rich Low_complexity Low_complexity 4 117 0 340 330 52 16 chr2 8179678 8179872 -245076711 - HAL1b LINE L1 -801 547 347 355 223 18 0 chr2 8180398 8180510 -245076073 + (TA)n Simple_repeat Simple_repeat 2 115 0 198 143 0 0 chr2 8182038 8182073 -245074510 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 360 12 0 chr2 8182073 8182159 -245074424 + L3 LINE CR1 1335 1421 -156 948 122 23 0 chr2 8183393 8183565 -245073018 + CT-rich Low_complexity Low_complexity 4 179 0 282 29 0 0 chr2 8183704 8183739 -245072844 + (TG)n Simple_repeat Simple_repeat 1 35 0 182 265 20 0 chr2 8184146 8184195 -245072388 - L2 LINE L2 -1 3312 3263 180 0 0 0 chr2 8184398 8184418 -245072165 + (A)n Simple_repeat Simple_repeat 1 20 0 274 178 68 14 chr2 8184555 8184628 -245071955 + MER116 DNA Mariner 2 78 -2 824 234 10 39 chr2 8186984 8187189 -245069394 + MER58A DNA MER1_type 21 219 -5 249 312 104 40 chr2 8187431 8187633 -245068950 - L3 LINE CR1 -26 1551 1337 304 370 7 22 chr2 8188017 8188152 -245068431 + MIR3 SINE MIR 10 142 -66 224 277 71 36 chr2 8188797 8188909 -245067674 + MER5A DNA MER1_type 10 125 -64 2132 117 176 16 chr2 8188976 8189345 -245067238 - MSTA LTR MaLR 0 428 1 1007 167 0 0 chr2 8189560 8189716 -245066867 + AluSg/x SINE Alu 137 292 -20 312 307 97 40 chr2 8189726 8189954 -245066629 - L2 LINE L2 -924 2390 2150 1953 201 52 0 chr2 8191773 8192177 -245064406 - MLT1C LTR MaLR -9 458 34 189 154 0 0 chr2 8192180 8192219 -245064364 + T-rich Low_complexity Low_complexity 1 39 0 250 336 24 48 chr2 8192259 8192467 -245064116 - L2 LINE L2 -28 3285 3083 435 278 148 61 chr2 8192976 8193206 -245063377 + MIR SINE MIR 5 254 -8 223 323 15 0 chr2 8193285 8193350 -245063233 + L2 LINE L2 3207 3272 0 2725 148 38 68 chr2 8194132 8194318 -245062265 - L1MA4 LINE L1 -8 6292 6102 1890 141 11 7 chr2 8194318 8194602 -245061981 + AluSx SINE Alu 1 285 -27 2725 148 38 68 chr2 8194602 8194615 -245061968 - L1MA4 LINE L1 -198 6102 6090 288 0 0 0 chr2 8194615 8194647 -245061936 + (TA)n Simple_repeat Simple_repeat 1 32 0 2725 148 38 68 chr2 8194647 8195006 -245061577 - L1MA4 LINE L1 -210 6090 5750 328 283 0 92 chr2 8195995 8196147 -245060436 + MIR SINE MIR 117 254 -8 1853 190 61 54 chr2 8196213 8196911 -245059672 + L1ME4a LINE L1 2074 2755 -3785 1047 161 11 0 chr2 8196913 8197087 -245059496 + AluSg/x SINE Alu 137 312 0 6933 231 91 47 chr2 8197087 8200265 -245056318 + L1ME4a LINE L1 2746 6066 -687 537 95 24 0 chr2 8200273 8200357 -245056226 + L1MD2 LINE L1 6272 6357 -2 222 272 27 95 chr2 8200400 8200547 -245056036 + L2 LINE L2 3168 3304 -9 426 313 97 14 chr2 8200834 8201051 -245055532 - MIR SINE MIR 0 262 28 1780 188 0 0 chr2 8201170 8201483 -245055100 - AluJb SINE Alu 0 313 1 2111 115 26 10 chr2 8201897 8202201 -245054382 + AluSq SINE Alu 1 309 -4 450 287 8 0 chr2 8204604 8204726 -245051857 + MER94 DNA DNA 7 129 -5 320 260 7 55 chr2 8205962 8206108 -245050475 + L1ME4a LINE L1 6362 6500 -15 843 159 0 0 chr2 8207439 8207571 -245049012 + FLAM_C SINE Alu 2 133 0 225 231 51 51 chr2 8207866 8207944 -245048639 + MIR SINE MIR 111 188 -74 33 66 0 0 chr2 8208058 8208119 -245048464 + AT_rich Low_complexity Low_complexity 1 61 0 195 129 0 0 chr2 8208551 8208582 -245048001 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 183 184 20 20 chr2 8208838 8208887 -245047696 + MIR SINE MIR 25 73 -135 1302 171 80 47 chr2 8209910 8210209 -245046374 + AluJo SINE Alu 4 312 0 1320 219 67 31 chr2 8211476 8211836 -245044747 - MLT1B LTR MaLR -2 388 14 189 242 0 15 chr2 8212383 8212449 -245044134 - L2 LINE L2 -3 3269 3205 314 245 0 57 chr2 8212917 8213047 -245043536 + MIR SINE MIR 85 205 -57 280 284 159 28 chr2 8213149 8213325 -245043258 + MIR SINE MIR 21 219 -43 1931 173 80 30 chr2 8213737 8214151 -245042432 - MLT2D LTR ERVL 0 534 1 334 278 31 0 chr2 8214151 8214248 -245042335 + L2 LINE L2 3172 3271 -1 227 313 117 0 chr2 8214921 8215049 -245041534 - MIR3 SINE MIR -24 184 42 2946 198 37 7 chr2 8216569 8217184 -245039399 - MER99 DNA DNA -3 825 192 38 22 0 0 chr2 8217818 8217863 -245038720 + AT_rich Low_complexity Low_complexity 1 45 0 482 272 0 0 chr2 8217863 8217966 -245038617 - MER99 DNA DNA -724 104 2 353 283 126 31 chr2 8218508 8218731 -245037852 - LTR16A LTR ERVL -1 449 206 1603 181 54 7 chr2 8218890 8219188 -245037395 - AluJo SINE Alu 0 312 1 1223 248 97 16 chr2 8220550 8221103 -245035480 + L1MEc LINE L1 2202 2770 -3445 743 343 65 14 chr2 8221103 8221669 -245034914 - L1MEc LINE L1 -5754 642 48 560 269 22 0 chr2 8221954 8222088 -245034495 + MLT1J1 LTR MaLR 2 138 -308 2394 103 0 0 chr2 8222410 8222712 -245033871 - AluSx SINE Alu -10 302 1 283 286 60 0 chr2 8223118 8223202 -245033381 + LTR50 LTR ERVL 1 89 -706 1708 188 3 13 chr2 8224730 8225044 -245031539 + AluJb SINE Alu 1 311 -1 2277 163 143 13 chr2 8225672 8226191 -245030392 + LTR49 LTR ERV1 1 653 0 2028 246 51 22 chr2 8226711 8227256 -245029327 - MER119 DNA MER1_type -5 578 18 296 278 122 0 chr2 8227315 8227430 -245029153 + MIR SINE MIR 43 171 -37 271 296 44 37 chr2 8227550 8227685 -245028898 - MER5A DNA MER1_type -36 153 18 394 290 82 30 chr2 8229106 8229259 -245027324 - MIR SINE MIR -13 249 79 1967 132 31 0 chr2 8229259 8229546 -245027037 - AluY SINE Alu -15 296 1 394 290 82 30 chr2 8229546 8229623 -245026960 - MIR SINE MIR -183 79 7 1863 149 3 10 chr2 8229652 8229940 -245026643 + AluSx SINE Alu 1 286 -26 1128 184 130 27 chr2 8232221 8232520 -245024063 + MLT1C LTR MaLR 1 330 -137 687 241 0 14 chr2 8232691 8232832 -245023751 + MLT1C LTR MaLR 329 467 0 188 234 0 0 chr2 8234172 8234219 -245022364 - L2 LINE L2 -5 3308 3262 305 221 207 21 chr2 8234508 8234653 -245021930 + MIR SINE MIR 76 247 -15 2563 98 16 19 chr2 8235166 8235542 -245021041 + THE1C LTR MaLR 1 375 0 209 293 73 16 chr2 8237478 8237601 -245018982 + L2 LINE L2 3184 3313 0 23 54 0 0 chr2 8238711 8238748 -245017835 + AT_rich Low_complexity Low_complexity 1 37 0 203 388 0 0 chr2 8239162 8239242 -245017341 + L2 LINE L2 3190 3269 -3 2048 134 30 35 chr2 8239312 8239678 -245016905 + THE1B LTR MaLR 1 364 0 237 291 27 18 chr2 8240714 8240824 -245015759 - MER87 LTR ERV1 -32 509 399 530 294 93 4 chr2 8241557 8241826 -245014757 - L1MCb LINE L1 -5163 882 590 26 0 0 0 chr2 8241960 8241986 -245014597 + AT_rich Low_complexity Low_complexity 1 26 0 245 323 36 30 chr2 8242170 8242337 -245014246 + MER5B DNA MER1_type 7 174 -4 1319 229 15 76 chr2 8242526 8242932 -245013651 - MLT1B LTR MaLR -9 381 1 5326 98 35 4 chr2 8243085 8243836 -245012747 + MER4E LTR ERV1 1 774 -5 2126 114 4 0 chr2 8244835 8245138 -245011445 - AluSx SINE Alu 0 304 1 2164 108 10 25 chr2 8245752 8246066 -245010517 + AluSp SINE Alu 1 309 -4 264 317 12 0 chr2 8247716 8247798 -245008785 - MIR SINE MIR -107 155 73 663 153 0 0 chr2 8247908 8248039 -245008544 + (TAG)n Simple_repeat Simple_repeat 2 132 0 427 206 125 22 chr2 8248040 8248176 -245008407 - MIR SINE MIR -1 261 112 21 0 0 0 chr2 8249817 8249838 -245006745 + AT_rich Low_complexity Low_complexity 1 21 0 2106 96 4 0 chr2 8251395 8251709 -245004874 + AluSx SINE Alu 1 315 0 456 311 38 16 chr2 8252101 8252284 -245004299 + MIR SINE MIR 8 194 -68 213 94 0 0 chr2 8252782 8252814 -245003769 + (TCC)n Simple_repeat Simple_repeat 2 33 0 214 308 77 10 chr2 8253080 8253184 -245003399 - MIR SINE MIR -50 212 102 187 216 0 78 chr2 8253860 8253911 -245002672 - L2 LINE L2 -6 3307 3261 598 219 139 0 chr2 8256545 8256696 -244999887 + MIR SINE MIR 47 218 -44 1337 225 8 0 chr2 8258269 8258518 -244998065 + MLT1C LTR MaLR 207 457 -10 274 227 13 27 chr2 8258576 8258651 -244997932 + Charlie7 DNA MER1_type 29 102 -2510 23 68 0 0 chr2 8258755 8258799 -244997784 + AT_rich Low_complexity Low_complexity 1 44 0 2012 137 0 0 chr2 8258881 8259181 -244997402 + AluSq SINE Alu 11 310 -3 479 309 124 18 chr2 8259918 8260135 -244996448 + MIR SINE MIR 12 251 -11 2174 282 129 18 chr2 8261048 8261921 -244994662 + L2 LINE L2 1576 2545 -769 15569 123 27 5 chr2 8261991 8264351 -244992232 - Tigger1 DNA MER2_type -6 2412 1 304 240 62 121 chr2 8264486 8264941 -244991642 - L1MCc LINE L1 -4892 1531 1300 2396 97 77 3 chr2 8265072 8265411 -244991172 + THE1B LTR MaLR 1 364 0 294 333 140 0 chr2 8265748 8265862 -244990721 + MIR SINE MIR 97 226 -36 418 326 80 29 chr2 8267641 8267816 -244988767 - MIR3 SINE MIR -5 203 20 204 221 143 52 chr2 8268117 8268271 -244988312 - MIR3 SINE MIR -34 174 7 351 304 52 26 chr2 8268299 8268414 -244988169 - L2 LINE L2 -4 3309 3192 519 261 56 6 chr2 8268877 8269038 -244987545 - MER5B DNA MER1_type -8 170 2 2113 98 44 3 chr2 8269141 8269438 -244987145 + AluSq SINE Alu 1 309 -4 1028 119 68 6 chr2 8269499 8269676 -244986907 + MER53 DNA DNA 2 189 0 2017 140 7 0 chr2 8269870 8270178 -244986405 - AluSx SINE Alu -2 310 1 240 210 84 119 chr2 8270255 8270398 -244986185 - MIR SINE MIR -40 222 85 1205 199 66 6 chr2 8271282 8271720 -244984863 - MLT2B1 LTR ERVL 0 515 1 205 238 0 0 chr2 8271966 8272008 -244984575 + (CACG)n Simple_repeat Simple_repeat 4 45 0 2118 101 20 7 chr2 8272469 8272766 -244983817 - AluSx SINE Alu -11 301 1 245 360 141 27 chr2 8273089 8273500 -244983083 + L2 LINE L2 2851 3308 -5 279 0 0 0 chr2 8273860 8273891 -244982692 + (CACAA)n Simple_repeat Simple_repeat 4 34 0 2310 84 3 3 chr2 8274510 8274818 -244981765 - AluSp SINE Alu -5 308 1 295 268 14 0 chr2 8274818 8274889 -244981694 - MER5A DNA MER1_type -112 77 6 533 278 36 29 chr2 8277794 8278071 -244978512 + L1ME3A LINE L1 3803 4081 -2065 1970 153 38 46 chr2 8278073 8278440 -244978143 - THE1B LTR MaLR 0 364 1 364 327 36 0 chr2 8278483 8278593 -244977990 + MIR SINE MIR 16 129 -133 1699 182 90 54 chr2 8278599 8279043 -244977540 + MER31B LTR ERV1 7 466 0 511 260 0 0 chr2 8279050 8279177 -244977406 + MIR SINE MIR 136 262 0 21 0 0 0 chr2 8279255 8279276 -244977307 + AT_rich Low_complexity Low_complexity 1 21 0 1951 111 18 0 chr2 8279321 8279624 -244976959 + AluSp SINE Alu 1 308 0 328 293 79 0 chr2 8279705 8279920 -244976663 + L1ME3A LINE L1 4388 4619 -1527 237 233 58 39 chr2 8279970 8280073 -244976510 + L1ME3A LINE L1 4733 4837 -1309 357 281 80 76 chr2 8280104 8280328 -244976255 - MIR SINE MIR -4 258 34 233 179 0 0 chr2 8280631 8280670 -244975913 + L1ME3A LINE L1 5670 5708 -413 335 299 103 8 chr2 8280683 8280800 -244975783 + L1ME3A LINE L1 5743 5870 -300 1912 156 0 0 chr2 8281101 8281408 -244975175 + AluSx SINE Alu 1 307 -5 1212 302 160 43 chr2 8281417 8281967 -244974616 - L2 LINE L2 -633 2681 2197 2149 182 31 43 chr2 8281967 8282478 -244974105 + MLT1D LTR MaLR 1 505 0 1212 302 160 43 chr2 8282478 8282903 -244973680 - L2 LINE L2 -1117 2197 1592 432 336 32 19 chr2 8282987 8283231 -244973352 - LTR16A LTR ERVL -184 266 17 180 111 0 0 chr2 8283482 8283509 -244973074 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 194 348 29 0 chr2 8283568 8283637 -244972946 + MIR SINE MIR 64 134 -128 198 0 0 0 chr2 8284382 8284404 -244972179 + (TC)n Simple_repeat Simple_repeat 1 22 0 252 200 42 83 chr2 8285077 8285197 -244971386 + L1M4 LINE L1 2302 2416 -3730 195 42 0 0 chr2 8285230 8285254 -244971329 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 710 296 73 52 chr2 8285397 8285408 -244971175 - LTR16A LTR ERVL -59 398 389 2360 120 3 55 chr2 8285408 8285792 -244970791 + THE1B LTR MaLR 1 364 0 710 296 73 52 chr2 8285792 8286146 -244970437 - LTR16A LTR ERVL -68 389 16 654 352 43 26 chr2 8286294 8286876 -244969707 - HERV16 LTR ERVL -381 5383 4792 990 317 85 38 chr2 8286994 8287831 -244968752 - HERV16 LTR ERVL -879 4606 3718 1108 350 72 3 chr2 8288334 8288865 -244967718 - HERV16 LTR ERVL -1905 3091 2617 1167 291 81 31 chr2 8289068 8289932 -244966651 - HERV16 LTR ERVL -2381 2615 1715 1170 307 124 22 chr2 8289982 8290782 -244965801 - HERV16 LTR ERVL -3420 1576 818 753 77 19 0 chr2 8290814 8290918 -244965665 - AluY SINE Alu -9 302 197 284 315 63 9 chr2 8290942 8291053 -244965530 - HERV16 LTR ERVL -4347 649 533 278 277 0 0 chr2 8291121 8291186 -244965397 - HERV16 LTR ERVL -4570 426 362 768 264 30 26 chr2 8291380 8291611 -244964972 - LTR16A LTR ERVL -13 437 206 186 43 0 0 chr2 8291979 8292002 -244964581 + (TTG)n Simple_repeat Simple_repeat 2 24 0 763 162 0 0 chr2 8292011 8292128 -244964455 - FLAM_C SINE Alu -16 117 1 487 172 11 11 chr2 8292213 8292306 -244964277 - AluJ/FLAM SINE Alu -218 94 2 240 185 77 0 chr2 8292873 8292938 -244963645 + L2 LINE L2 3168 3237 -35 583 272 30 18 chr2 8293759 8293928 -244962655 + MIR SINE MIR 53 223 -39 232 355 53 20 chr2 8294109 8294261 -244962322 + MIR3 SINE MIR 51 207 -1 309 377 8 8 chr2 8295021 8295143 -244961440 + MIR3 SINE MIR 69 190 -18 1691 84 44 0 chr2 8296507 8296732 -244959851 + AluSq SINE Alu 1 235 -78 267 374 70 12 chr2 8296746 8296917 -244959666 + MIR3 SINE MIR 16 196 -12 284 336 114 14 chr2 8297740 8297880 -244958703 + L2 LINE L2 3118 3271 -1 222 222 206 0 chr2 8297922 8297985 -244958598 - L2 LINE L2 0 3272 3197 1130 212 35 12 chr2 8298653 8298908 -244957675 + MIR SINE MIR 1 261 -1 21 0 0 0 chr2 8298916 8298937 -244957646 + AT_rich Low_complexity Low_complexity 1 21 0 212 287 38 57 chr2 8299210 8299367 -244957216 + MIR3 SINE MIR 6 159 -49 1617 197 49 42 chr2 8300568 8300954 -244955629 + MER63B DNA MER1_type 43 431 -5 226 310 39 105 chr2 8300954 8301183 -244955400 + L2 LINE L2 2545 2758 -556 217 374 23 30 chr2 8301288 8301419 -244955164 + L2 LINE L2 2955 3084 -188 294 369 47 30 chr2 8301486 8301719 -244954864 + MIR SINE MIR 5 241 -21 380 326 10 18 chr2 8302087 8302216 -244954367 - MIR SINE MIR -69 139 10 186 231 31 46 chr2 8302388 8302453 -244954130 - L3 LINE CR1 -717 860 797 210 154 0 0 chr2 8302749 8302788 -244953795 + T-rich Low_complexity Low_complexity 3 41 0 2075 125 0 0 chr2 8303324 8303620 -244952963 - AluSx SINE Alu -16 296 1 575 224 33 26 chr2 8303642 8303794 -244952789 - MIR SINE MIR 0 262 110 280 23 23 0 chr2 8304526 8304570 -244952013 - L1MA3 LINE L1 0 6305 6261 1081 242 148 24 chr2 8304702 8305041 -244951542 + MLT1F LTR MaLR 133 513 -29 26 50 0 0 chr2 8305196 8305236 -244951347 + AT_rich Low_complexity Low_complexity 1 40 0 779 229 48 19 chr2 8305270 8305480 -244951103 + AluJo SINE Alu 5 220 -92 316 281 48 82 chr2 8305551 8305711 -244950872 + MER46C DNA MER2_type 7 156 -182 1821 104 4 0 chr2 8305711 8305960 -244950623 + AluSp SINE Alu 2 251 -62 316 281 48 82 chr2 8305960 8306069 -244950514 + MER46C DNA MER2_type 156 267 -71 1360 123 21 8 chr2 8306094 8306329 -244950254 + AluY SINE Alu 5 242 -69 313 221 83 50 chr2 8306521 8306700 -244949883 + L1M2 LINE L1 2725 3897 -2951 342 260 0 39 chr2 8306832 8306936 -244949647 - MIR SINE MIR -57 151 52 596 271 51 38 chr2 8306989 8307193 -244949390 + MIR SINE MIR 3 209 -53 2080 118 0 29 chr2 8307886 8308200 -244948383 + AluSx SINE Alu 1 305 -7 2037 112 3 13 chr2 8308213 8308517 -244948066 + AluSq SINE Alu 1 301 -12 1431 140 8 8 chr2 8308588 8308824 -244947759 + AluSq SINE Alu 1 236 -77 452 314 107 0 chr2 8309056 8309225 -244947358 + L1MC/D LINE L1 5525 5711 -2097 939 219 29 0 chr2 8309309 8309519 -244947064 + AluJo SINE Alu 81 296 -16 1764 140 25 0 chr2 8309675 8309953 -244946630 + AluSx SINE Alu 1 285 -27 268 24 24 24 chr2 8309960 8310002 -244946581 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 300 289 7 94 chr2 8310301 8310450 -244946133 + MIR3 SINE MIR 59 194 -14 2227 98 0 0 chr2 8310726 8311022 -244945561 + AluY SINE Alu 1 296 -15 1077 187 52 38 chr2 8311123 8311390 -244945193 + AluJo SINE Alu 1 271 -41 268 284 0 11 chr2 8311749 8311837 -244944746 + CT-rich Low_complexity Low_complexity 3 89 0 1743 166 0 16 chr2 8312157 8312464 -244944119 - AluSx SINE Alu -6 306 5 1797 169 3 10 chr2 8312570 8312884 -244943699 - AluJb SINE Alu 0 312 1 219 284 20 59 chr2 8312904 8313006 -244943577 + L2 LINE L2 3139 3236 -36 372 43 0 0 chr2 8313008 8313054 -244943529 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 212 278 89 36 chr2 8313093 8313258 -244943325 + MIR SINE MIR 6 181 -27 735 225 69 32 chr2 8313526 8313628 -244942955 - L1MB5 LINE L1 0 6174 6077 1595 166 0 34 chr2 8313628 8313924 -244942659 - AluJo SINE Alu -26 286 1 735 225 69 32 chr2 8313924 8314039 -244942544 - L1MB5 LINE L1 -97 6077 5949 1847 141 0 26 chr2 8314258 8314563 -244942020 - AluSx SINE Alu -15 297 1 276 100 0 0 chr2 8314625 8314665 -244941918 + (TC)n Simple_repeat Simple_repeat 1 40 0 1704 103 0 9 chr2 8314954 8315186 -244941397 + MER30 DNA MER1_type 1 230 0 235 331 78 24 chr2 8315198 8315364 -244941219 - MIR SINE MIR -71 191 17 1683 147 29 4 chr2 8315512 8315791 -244940792 - AluJo SINE Alu -18 294 9 319 212 91 0 chr2 8315801 8315867 -244940716 - L1MC5 LINE L1 -438 7523 7452 2273 104 0 0 chr2 8315876 8316185 -244940398 + AluSx SINE Alu 1 309 -3 1489 157 0 4 chr2 8316285 8316527 -244940056 + AluJb SINE Alu 59 299 -13 301 223 39 77 chr2 8317296 8317426 -244939157 - L1MC5 LINE L1 -836 7125 7001 2022 130 3 0 chr2 8317427 8317726 -244938857 + AluSx SINE Alu 1 300 -12 263 113 9 209 chr2 8317943 8318045 -244938538 - L1ME1 LINE L1 -2 6176 6089 465 105 17 244 chr2 8318055 8318131 -244938452 - L1MA5A LINE L1 0 6297 6280 1659 172 3 0 chr2 8318131 8318416 -244938167 - AluJo SINE Alu -26 286 1 465 105 17 244 chr2 8318416 8318511 -244938072 - L1MA5A LINE L1 -17 6280 6165 659 127 9 0 chr2 8318535 8318645 -244937938 - L1MA5A LINE L1 -116 6181 6071 473 189 35 154 chr2 8318646 8318798 -244937785 - L1ME1 LINE L1 -59 6107 5983 2064 127 0 3 chr2 8318798 8319098 -244937485 - AluSx SINE Alu -13 299 1 473 189 35 154 chr2 8319098 8319146 -244937437 - L1ME1 LINE L1 -183 5983 5931 1241 183 61 0 chr2 8319158 8319437 -244937146 - AluSx SINE Alu -6 296 1 373 360 34 6 chr2 8320239 8320414 -244936169 + MIR SINE MIR 16 195 -67 3071 70 19 2 chr2 8320423 8320837 -244935746 + L1PA10 LINE L1 5743 6163 -5 24 0 0 0 chr2 8320913 8320937 -244935646 + AT_rich Low_complexity Low_complexity 1 24 0 205 350 17 50 chr2 8321977 8322097 -244934486 + L2 LINE L2 3157 3272 0 612 167 79 0 chr2 8322163 8322277 -244934306 - Charlie1 DNA MER1_type -1 2760 2638 201 342 95 37 chr2 8322536 8322726 -244933857 - MIR SINE MIR -39 223 23 305 278 103 0 chr2 8322996 8323093 -244933490 + L2 LINE L2 3158 3264 -8 202 150 25 0 chr2 8323104 8323144 -244933439 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 8323152 8323181 -244933402 + AT_rich Low_complexity Low_complexity 1 29 0 292 244 154 41 chr2 8324182 8324305 -244932278 - L2 LINE L2 -1 3312 3176 271 373 54 54 chr2 8324394 8324673 -244931910 - L2 LINE L2 -340 2974 2696 22 35 0 0 chr2 8325552 8325581 -244931002 + AT_rich Low_complexity Low_complexity 1 29 0 183 298 0 18 chr2 8326096 8326153 -244930430 - MIR SINE MIR -126 136 81 1267 265 84 62 chr2 8326347 8326485 -244930098 + MLT1H1 LTR MaLR 2 135 -420 736 209 62 0 chr2 8326485 8326662 -244929921 - MER53 DNA DNA -1 188 1 1267 265 84 62 chr2 8326662 8327009 -244929574 + MLT1H1 LTR MaLR 135 498 -57 1802 135 14 0 chr2 8327009 8327290 -244929293 + AluSc SINE Alu 1 285 -24 1079 116 7 0 chr2 8327328 8327475 -244929108 + THE1B LTR MaLR 1 148 -216 1919 154 62 11 chr2 8329023 8329380 -244927203 - THE1C LTR MaLR 0 375 1 319 333 124 7 chr2 8329777 8329930 -244926653 - MIR SINE MIR -57 205 35 283 323 40 16 chr2 8330413 8330537 -244926046 + L3 LINE CR1 1385 1511 -66 1912 146 3 0 chr2 8330860 8331161 -244925422 + AluJb SINE Alu 1 302 -10 326 258 50 42 chr2 8332249 8332369 -244924214 - MIR SINE MIR -52 210 90 247 311 13 10 chr2 8332503 8332665 -244923918 - MIR SINE MIR -1 261 48 208 305 95 38 chr2 8332998 8333103 -244923480 + MER5B DNA MER1_type 54 164 -14 249 293 207 21 chr2 8333146 8333286 -244923297 + MER5A DNA MER1_type 4 169 -20 476 240 147 8 chr2 8333761 8333890 -244922693 + MIR SINE MIR 72 218 -44 180 0 0 0 chr2 8333936 8333956 -244922627 + (CA)n Simple_repeat Simple_repeat 1 20 0 297 198 58 12 chr2 8334023 8334109 -244922474 + L1ME4a LINE L1 6030 6119 -2 255 328 15 21 chr2 8334227 8334385 -244922198 + MIR SINE MIR 58 212 -50 230 154 26 0 chr2 8335671 8335710 -244920873 + MLT1I LTR MaLR 98 137 -272 569 273 97 6 chr2 8337547 8337723 -244918860 - MIR SINE MIR -55 207 16 673 296 71 4 chr2 8339358 8339584 -244916999 - MIR SINE MIR 0 262 22 223 198 49 111 chr2 8340868 8340949 -244915634 + MIR SINE MIR 111 186 -76 312 262 98 25 chr2 8341274 8341396 -244915187 + MER115 DNA AcHobo 100 230 -463 638 237 100 52 chr2 8341508 8341757 -244914826 + MER115 DNA AcHobo 426 686 -7 195 100 0 0 chr2 8341957 8341987 -244914596 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 354 230 97 26 chr2 8341987 8342100 -244914483 - L2 LINE L2 -13 3300 3180 23 0 0 0 chr2 8342711 8342734 -244913849 + AT_rich Low_complexity Low_complexity 1 23 0 1252 138 0 0 chr2 8343172 8343375 -244913208 + L1MA5 LINE L1 6097 6299 -1 700 236 44 58 chr2 8344985 8345210 -244911373 + MIR SINE MIR 31 252 -10 586 130 130 0 chr2 8345572 8345710 -244910873 + THE1B LTR MaLR 209 364 0 267 111 0 0 chr2 8345714 8345750 -244910833 + MLT1G LTR MaLR 555 590 0 1903 211 74 18 chr2 8346492 8346937 -244909646 + MLT1D LTR MaLR 36 505 0 504 324 89 12 chr2 8346949 8347196 -244909387 + L2 LINE L2 2671 2936 -378 270 307 64 21 chr2 8347196 8347391 -244909192 + MLT1J2 LTR MaLR 1 207 -239 205 293 49 37 chr2 8347461 8347543 -244909040 - L2 LINE L2 -620 2694 2612 860 245 28 36 chr2 8347581 8347834 -244908749 - MIR SINE MIR -10 252 2 2342 118 21 16 chr2 8348321 8348694 -244907889 - THE1C LTR MaLR 0 375 1 192 278 31 31 chr2 8349340 8349437 -244907146 + L2 LINE L2 2912 3008 -305 449 290 69 0 chr2 8349450 8349595 -244906988 - MIR SINE MIR -74 188 34 280 267 58 0 chr2 8349797 8349883 -244906700 - MER5A DNA MER1_type -77 112 22 509 206 109 23 chr2 8349937 8350112 -244906471 - LTR33 LTR ERVL -3 518 329 453 250 180 0 chr2 8351852 8351980 -244904603 - MIR SINE MIR -1 261 111 1926 125 21 14 chr2 8353612 8353901 -244902682 + AluSx SINE Alu 1 291 -21 306 170 0 0 chr2 8353909 8353956 -244902627 + MLT1G-int LTR MaLR 1684 1730 -5 1071 181 169 68 chr2 8354024 8354349 -244902234 - MLT1A1 LTR MaLR -7 358 1 2232 76 79 9 chr2 8354790 8355119 -244901464 + L1PB2 LINE L1 5799 6150 -1 506 284 43 38 chr2 8356000 8356116 -244900467 - L1ME4a LINE L1 -44 6077 5963 393 75 0 0 chr2 8356116 8356169 -244900414 + (CA)n Simple_repeat Simple_repeat 2 54 0 506 284 43 38 chr2 8356169 8356443 -244900140 - L1ME4a LINE L1 -158 5963 5685 240 35 0 0 chr2 8357406 8357435 -244899148 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 752 199 0 11 chr2 8357570 8357751 -244898832 + G-rich Low_complexity Low_complexity 2 180 0 201 195 0 0 chr2 8357749 8357790 -244898793 + GA-rich Low_complexity Low_complexity 1 41 0 * 310 207 14 83 chr2 8357900 8358045 -244898538 - MER103 DNA DNA 0 166 32 463 154 0 26 chr2 8358215 8358293 -244898290 + MER63 DNA MER1_type 42 743 -93 229 300 131 23 chr2 8358767 8358897 -244897686 - L2 LINE L2 -219 3053 2910 1478 211 42 20 chr2 8359492 8359847 -244896736 - MLT1A1 LTR MaLR -2 363 1 768 266 105 101 chr2 8360985 8361499 -244895084 + MLT1G LTR MaLR 18 581 -9 1437 194 24 78 chr2 8362012 8362424 -244894159 - MLT1B LTR MaLR 0 390 1 534 239 56 0 chr2 8362443 8362585 -244893998 + MLT1C LTR MaLR 317 466 -1 206 256 12 73 chr2 8362726 8362808 -244893775 + GA-rich Low_complexity Low_complexity 2 78 0 1816 150 3 3 chr2 8363402 8363696 -244892887 + AluJb SINE Alu 1 294 -18 2562 35 0 0 chr2 8363961 8364271 -244892312 + AluY SINE Alu 1 310 -1 261 0 0 0 chr2 8365360 8365389 -244891194 + (CA)n Simple_repeat Simple_repeat 1 29 0 270 0 0 0 chr2 8365465 8365495 -244891088 + (A)n Simple_repeat Simple_repeat 1 30 0 2760 115 24 21 chr2 8366638 8367063 -244889520 + MSTB LTR MaLR 1 426 0 222 313 15 0 chr2 8367693 8367760 -244888823 - MIR SINE MIR -63 145 78 252 325 150 35 chr2 8368292 8368492 -244888091 + MIR SINE MIR 34 256 -6 325 0 44 0 chr2 8368830 8368875 -244887708 + (CA)n Simple_repeat Simple_repeat 1 47 0 213 262 87 39 chr2 8368884 8368987 -244887596 + L3 LINE CR1 355 462 -1115 274 173 74 62 chr2 8369019 8369100 -244887483 - MIR SINE MIR -81 181 100 184 231 77 90 chr2 8369303 8369381 -244887202 - MIR SINE MIR -165 97 21 216 253 0 76 chr2 8370880 8370959 -244885624 - L2 LINE L2 0 3313 3241 1065 241 119 71 chr2 8371820 8372314 -244884269 + MLT1K LTR MaLR 70 587 -1 228 220 17 0 chr2 8372860 8372919 -244883664 + MER69 DNA AcHobo 22 81 -96 1065 259 69 13 chr2 8373370 8373745 -244882838 + MER69 DNA AcHobo 2094 2489 -37 525 299 32 87 chr2 8374101 8374458 -244882125 - L2 LINE L2 -887 2427 2101 1517 252 24 37 chr2 8374458 8374969 -244881614 + MLT1D LTR MaLR 1 504 -1 525 299 32 87 chr2 8374969 8375080 -244881503 - L2 LINE L2 -1213 2101 1985 309 377 8 8 chr2 8375233 8375355 -244881228 + MIR3 SINE MIR 69 190 -18 488 125 0 12 chr2 8377552 8377632 -244878951 - L1MA5 LINE L1 -125 6175 6097 23 0 0 0 chr2 8378070 8378093 -244878490 + AT_rich Low_complexity Low_complexity 1 23 0 1580 112 20 24 chr2 8378720 8378971 -244877612 - MSTB LTR MaLR -176 250 1 875 254 94 94 chr2 8380406 8380446 -244876137 - MLT1H1 LTR MaLR 0 555 516 2546 100 19 6 chr2 8380446 8380805 -244875778 - THE1B LTR MaLR 0 364 1 875 254 94 94 chr2 8380805 8380843 -244875740 - MLT1H1 LTR MaLR -39 516 479 1804 135 14 0 chr2 8380843 8381124 -244875459 - AluSc SINE Alu -24 285 1 875 254 94 94 chr2 8381124 8381458 -244875125 - MLT1H1 LTR MaLR -75 480 142 1867 155 0 13 chr2 8381774 8382083 -244874500 + AluSx SINE Alu 1 305 -7 463 157 67 94 chr2 8382358 8382532 -244874051 - L1MA8 LINE L1 -3 6288 6120 2049 124 3 7 chr2 8382574 8382881 -244873702 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 8382920 8382943 -244873640 + AT_rich Low_complexity Low_complexity 1 23 0 877 183 89 10 chr2 8383378 8383684 -244872899 + L1MC/D LINE L1 5122 5446 -760 272 321 46 18 chr2 8383799 8383908 -244872675 + HAL1b LINE L1 800 911 -437 471 97 0 0 chr2 8384716 8384778 -244871805 - Alu SINE Alu -255 63 2 1865 129 41 7 chr2 8384884 8385179 -244871404 + AluSx SINE Alu 3 307 -5 1241 226 79 8 chr2 8385337 8385704 -244870879 - LTR37A LTR ERV1 0 426 34 7177 58 1 0 chr2 8385821 8387042 -244869541 + L1PA7 LINE L1 4957 6178 0 1946 114 3 10 chr2 8389109 8389398 -244867185 - AluSx SINE Alu -25 287 1 1434 191 3 3 chr2 8390689 8390992 -244865591 - AluSg SINE Alu -7 303 1 1122 314 46 24 chr2 8390996 8391537 -244865046 - L2 LINE L2 -541 2773 2221 267 318 61 21 chr2 8391575 8391731 -244864852 - MIR SINE MIR -62 146 9 429 122 0 0 chr2 8391911 8391985 -244864598 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 214 282 51 0 chr2 8392420 8392501 -244864082 - MIR SINE MIR -42 166 79 1012 127 10 35 chr2 8392513 8392938 -244863645 + (GGATG)n Simple_repeat Simple_repeat 1 591 0 180 268 0 0 chr2 8393500 8393541 -244863042 - MIR3 SINE MIR 0 208 168 231 146 0 0 chr2 8393601 8393642 -244862941 + (A)n Simple_repeat Simple_repeat 1 41 0 1822 153 10 3 chr2 8395497 8395805 -244860778 - AluSx SINE Alu -2 310 1 196 298 119 0 chr2 8396011 8396095 -244860488 + L2 LINE L2 3171 3264 -8 428 333 91 15 chr2 8396554 8396752 -244859831 + MIR SINE MIR 39 251 -11 210 320 87 10 chr2 8397278 8397381 -244859202 - L2 LINE L2 -4 3268 3158 332 329 73 81 chr2 8397494 8397838 -244858745 + L2 LINE L2 2932 3272 0 648 259 165 35 chr2 8398123 8398223 -244858360 + L1 LINE L1 3527 3613 -2533 1481 187 20 13 chr2 8398223 8398522 -244858061 - AluJb SINE Alu -11 301 1 648 259 165 35 chr2 8398522 8398791 -244857792 + L1 LINE L1 3613 3944 -2202 22 35 0 0 chr2 8398922 8398951 -244857632 + AT_rich Low_complexity Low_complexity 1 29 0 367 310 141 46 chr2 8399002 8399286 -244857297 + L1 LINE L1 4025 4335 -1811 1833 152 0 3 chr2 8399407 8399711 -244856872 + AluSx SINE Alu 1 303 0 23 0 0 0 chr2 8399914 8399937 -244856646 + AT_rich Low_complexity Low_complexity 1 23 0 276 296 87 36 chr2 8400161 8400357 -244856226 - L2 LINE L2 -212 3060 2855 262 232 0 0 chr2 8400437 8400493 -244856090 + MER4-int LTR ERV1 1107 1162 -5436 615 259 0 0 chr2 8400493 8401043 -244855540 + (TG)n Simple_repeat Simple_repeat 1 550 0 370 346 82 27 chr2 8401069 8401445 -244855138 - L2 LINE L2 -593 2721 2325 188 327 131 13 chr2 8402032 8402185 -244854398 - MIR SINE MIR -57 205 35 260 331 40 16 chr2 8402668 8402792 -244853791 + L3 LINE CR1 1385 1511 -66 1919 146 3 0 chr2 8403115 8403417 -244853166 + AluJb SINE Alu 1 303 -9 231 254 136 80 chr2 8404476 8404689 -244851894 - MIR SINE MIR -25 237 13 208 305 95 38 chr2 8405258 8405363 -244851220 + MER5B DNA MER1_type 54 164 -14 219 317 19 29 chr2 8405406 8405510 -244851073 + MER5A DNA MER1_type 4 106 -83 290 275 18 46 chr2 8406392 8406501 -244850082 + MIR SINE MIR 37 142 -66 324 350 0 0 chr2 8406749 8406852 -244849731 + CT-rich Low_complexity Low_complexity 4 106 0 1993 142 0 0 chr2 8406959 8407261 -244849322 + AluSx SINE Alu 1 302 -10 555 16 0 0 chr2 8407268 8407332 -244849251 + (GGAA)n Simple_repeat Simple_repeat 4 67 0 21 57 0 0 chr2 8408473 8408508 -244848075 + AT_rich Low_complexity Low_complexity 1 35 0 609 160 111 50 chr2 8408509 8408690 -244847893 + MER20 DNA MER1_type 1 192 -27 185 299 26 65 chr2 8413198 8413275 -244843308 - L2 LINE L2 -223 3049 2976 424 282 103 20 chr2 8413615 8413810 -244842773 + MIR SINE MIR 48 258 -4 1831 146 14 0 chr2 8415459 8415773 -244840810 - AluSx SINE Alu 0 312 1 340 301 9 9 chr2 8416081 8416194 -244840389 + MER94 DNA DNA 1 113 -21 185 62 0 31 chr2 8416634 8416666 -244839917 + (TA)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr2 8416997 8417018 -244839565 + AT_rich Low_complexity Low_complexity 1 21 0 1662 165 7 14 chr2 8417018 8417315 -244839268 + AluJb SINE Alu 1 295 -17 249 315 87 47 chr2 8418874 8419001 -244837582 + L2 LINE L2 3141 3272 0 444 258 44 85 chr2 8420525 8420669 -244835914 + L1ME4a LINE L1 5530 5661 -460 2269 97 3 0 chr2 8420669 8420979 -244835604 + AluSp SINE Alu 1 311 -2 444 258 44 85 chr2 8420979 8421082 -244835501 + L1ME4a LINE L1 5661 5767 -354 4188 80 11 25 chr2 8421156 8421718 -244834865 - MER41A LTR ERV1 0 554 1 402 366 24 0 chr2 8421727 8421891 -244834692 + MIR SINE MIR 83 250 -12 339 232 89 0 chr2 8422079 8422191 -244834392 + L1ME4a LINE L1 5991 6112 -9 241 269 0 0 chr2 8422235 8422287 -244834296 - L3 LINE CR1 -7 1570 1519 335 277 32 11 chr2 8422435 8422529 -244834054 + L2 LINE L2 3173 3268 -4 3751 142 48 2 chr2 8422684 8423291 -244833292 + MER41B LTR ERV1 1 635 0 717 237 19 13 chr2 8424551 8424707 -244831876 - MER5B DNA MER1_type -21 157 1 350 311 68 0 chr2 8425141 8425244 -244831339 - L2 LINE L2 -46 3226 3117 2747 133 166 0 chr2 8425537 8425989 -244830594 - MER1A DNA MER1_type -1 528 2 316 296 86 49 chr2 8426589 8426751 -244829832 - MIR3 SINE MIR -11 197 30 711 276 70 0 chr2 8429405 8429604 -244826979 - MIR SINE MIR -36 226 14 402 21 0 0 chr2 8432251 8432298 -244824285 + (CATA)n Simple_repeat Simple_repeat 1 47 0 272 321 46 18 chr2 8433346 8433455 -244823128 - HAL1b LINE L1 -437 911 800 1100 173 82 8 chr2 8433570 8433901 -244822682 - L1MC/D LINE L1 -760 5386 5097 303 248 111 26 chr2 8433929 8434046 -244822537 - HAL1b LINE L1 -476 872 746 22 88 0 0 chr2 8434073 8434130 -244822453 + AT_rich Low_complexity Low_complexity 1 57 0 2256 87 0 7 chr2 8434210 8434520 -244822063 - AluY SINE Alu -3 308 1 566 192 54 15 chr2 8434940 8435070 -244821513 + MIR SINE MIR 108 242 -20 570 277 70 18 chr2 8435099 8435384 -244821199 - HAL1 LINE L1 -834 1673 1374 473 283 29 83 chr2 8435390 8435656 -244820927 - L1MEd LINE L1 -1248 1242 930 683 328 37 61 chr2 8435843 8436325 -244820258 - L1MEd LINE L1 -1248 1242 794 294 286 84 59 chr2 8437014 8437287 -244819296 - HERV16 LTR ERVL -505 5259 4980 348 305 106 69 chr2 8437325 8437478 -244819105 - HERV16 LTR ERVL -931 4833 4687 1848 112 0 121 chr2 8437478 8437818 -244818765 - AluSx SINE Alu -3 299 1 348 305 106 69 chr2 8437818 8438126 -244818457 - HERV16 LTR ERVL -1077 4687 4355 1094 304 92 27 chr2 8438313 8439133 -244817450 - HERV16 LTR ERVL -2691 2305 1709 1883 307 73 44 chr2 8439480 8440002 -244816581 - HERV16 LTR ERVL -3785 1211 706 3276 133 82 0 chr2 8440002 8440489 -244816094 - MER1A DNA MER1_type 0 527 1 1883 307 73 44 chr2 8440489 8441072 -244815511 - HERV16 LTR ERVL -4290 706 74 291 268 0 0 chr2 8441674 8441745 -244814838 + CT-rich Low_complexity Low_complexity 3 73 0 27 0 0 0 chr2 8442626 8442653 -244813930 + AT_rich Low_complexity Low_complexity 1 27 0 198 217 0 36 chr2 8443124 8443207 -244813376 + CT-rich Low_complexity Low_complexity 3 82 0 892 182 109 28 chr2 8443309 8443401 -244813182 - ORSL DNA AcHobo 0 275 192 5560 48 6 0 chr2 8443401 8444074 -244812509 + L1PA7 LINE L1 5473 6149 -5 892 182 109 28 chr2 8444074 8444228 -244812355 - ORSL DNA AcHobo -83 192 9 513 269 40 23 chr2 8444265 8444440 -244812143 - MER5B DNA MER1_type 0 178 1 256 245 174 52 chr2 8444447 8444602 -244811981 - MER5A DNA MER1_type -3 186 13 493 293 84 27 chr2 8444678 8444903 -244811680 - MIR SINE MIR -13 249 12 2057 116 7 10 chr2 8445162 8445472 -244811111 + AluSx SINE Alu 1 309 -3 765 184 40 17 chr2 8445779 8445953 -244810630 - Zaphod DNA AcHobo -257 3774 3597 2118 244 92 34 chr2 8445954 8446738 -244809845 - Zaphod DNA AcHobo -3042 989 161 1630 205 89 27 chr2 8446768 8447217 -244809366 - MLT1D LTR MaLR -28 477 1 426 208 77 54 chr2 8447224 8447354 -244809229 - Zaphod DNA AcHobo -3875 156 24 193 324 59 0 chr2 8447386 8447454 -244809129 + MIR SINE MIR 185 256 -6 248 289 114 48 chr2 8448407 8448819 -244807764 + L1MC4a LINE L1 4334 4772 -1374 860 317 48 33 chr2 8449209 8449814 -244806769 + L1MC4a LINE L1 5292 5905 -1903 2332 71 0 0 chr2 8449969 8450263 -244806320 - AluY SINE Alu -16 295 2 242 235 37 25 chr2 8450288 8450369 -244806214 + CT-rich Low_complexity Low_complexity 4 85 0 408 238 57 78 chr2 8450392 8450461 -244806122 + L1ME4a LINE L1 5933 6002 -119 1828 162 26 18 chr2 8450461 8450800 -244805783 + MER2 DNA MER2_type 3 344 0 408 238 57 78 chr2 8450800 8450923 -244805660 + L1ME4a LINE L1 6002 6121 0 252 304 78 35 chr2 8451206 8451321 -244805262 - L2 LINE L2 -8 3305 3186 223 247 0 90 chr2 8452499 8452677 -244803906 + (TTGGGG)n Simple_repeat Simple_repeat 6 167 0 329 295 0 0 chr2 8452783 8452878 -244803705 + (TG)n Simple_repeat Simple_repeat 2 96 0 2231 153 75 0 chr2 8454260 8454658 -244801925 + MSTA LTR MaLR 1 428 0 475 72 0 12 chr2 8454756 8454839 -244801744 - MER96B DNA MER1_type? -239 178 97 912 119 3 226 chr2 8454870 8455207 -244801376 + L1MA4 LINE L1 6030 6291 -9 295 150 17 0 chr2 8455220 8455280 -244801303 - MER96B DNA MER1_type? -307 110 50 525 288 112 15 chr2 8455627 8455832 -244800751 + MIR SINE MIR 28 252 -10 235 178 14 55 chr2 8456679 8456752 -244799831 + MLT1J LTR MaLR 429 600 -15 2140 133 0 0 chr2 8458794 8459094 -244797489 - AluSx SINE Alu -12 300 1 2216 125 0 0 chr2 8459256 8459553 -244797030 + AluSg SINE Alu 1 297 -13 404 236 6 0 chr2 8460070 8460248 -244796335 + CT-rich Low_complexity Low_complexity 2 180 0 541 307 53 5 chr2 8460663 8460852 -244795731 - MIR SINE MIR -1 261 64 866 217 66 26 chr2 8461170 8461474 -244795109 - MER33 DNA MER1_type 0 324 9 409 318 88 7 chr2 8461742 8461890 -244794693 + MIR SINE MIR 88 247 -15 2794 10 0 0 chr2 8463531 8463827 -244792756 - AluYb8 SINE Alu -2 316 21 322 333 111 0 chr2 8463989 8464124 -244792459 + L2 LINE L2 3121 3270 -2 2341 114 0 0 chr2 8465594 8465900 -244790683 - AluSx SINE Alu -6 306 1 440 300 36 0 chr2 8465902 8466042 -244790541 - MIR SINE MIR -70 192 48 203 274 219 14 chr2 8466939 8467085 -244789498 + MIR SINE MIR 87 262 0 205 290 87 0 chr2 8467294 8467363 -244789220 - MIR SINE MIR -136 126 52 319 320 66 39 chr2 8468163 8468344 -244788239 - MIR SINE MIR -57 205 20 432 188 10 30 chr2 8469097 8469198 -244787385 - MIR3 SINE MIR -7 201 103 216 320 30 40 chr2 8469886 8469986 -244786597 + MIR SINE MIR 45 143 -65 341 333 79 12 chr2 8471073 8471238 -244785345 + L1MB4 LINE L1 4637 4812 -1334 226 266 11 21 chr2 8471305 8471399 -244785184 + L1MB4 LINE L1 4918 5010 -1136 2352 222 3 53 chr2 8471613 8471875 -244784708 + L1MB4 LINE L1 5570 5844 -336 2527 57 0 63 chr2 8471875 8472207 -244784376 + AluY SINE Alu 1 311 0 2352 222 3 53 chr2 8472207 8472583 -244784000 + L1MB4 LINE L1 5844 6176 -4 1568 213 22 14 chr2 8472583 8472945 -244783638 + L1MB8 LINE L1 5814 6178 0 854 291 137 18 chr2 8472958 8473577 -244783006 + L1ME3A LINE L1 5263 5955 -215 1295 124 30 0 chr2 8473785 8473986 -244782597 + L1PA10 LINE L1 5962 6168 0 2191 91 18 3 chr2 8475177 8475462 -244781121 - AluSx SINE Alu -14 298 10 296 173 0 0 chr2 8476047 8476099 -244780484 + MADE1 DNA Mariner 29 80 0 809 138 0 36 chr2 8476161 8476299 -244780284 - FLAM_C SINE Alu 0 133 1 528 122 0 0 chr2 8476740 8476822 -244779761 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 234 224 35 35 chr2 8478608 8478693 -244777890 - MLT1K LTR MaLR -13 575 491 234 260 77 96 chr2 8478940 8479044 -244777539 - MER5A DNA MER1_type -84 105 4 356 241 11 35 chr2 8479055 8479142 -244777441 - MIR SINE MIR -165 97 13 312 27 0 0 chr2 8480824 8480861 -244775722 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 259 283 137 47 chr2 8482203 8482415 -244774168 + MLT1L LTR MaLR 2 232 -383 35 0 0 0 chr2 8483126 8483161 -244773422 + AT_rich Low_complexity Low_complexity 1 35 0 625 324 29 11 chr2 8483176 8483448 -244773135 + MLT1L LTR MaLR 6 282 -333 388 177 76 0 chr2 8483587 8483666 -244772917 - MLT1J1 LTR MaLR -123 323 239 532 184 3 0 chr2 8483908 8484015 -244772568 - MLT1J1 LTR MaLR -317 133 25 526 229 30 8 chr2 8484012 8484143 -244772440 - MER45A DNA AcHobo -30 148 15 * 578 111 30 0 chr2 8484958 8485057 -244771526 + (ATGGTG)n Simple_repeat Simple_repeat 4 105 0 353 276 143 0 chr2 8485507 8485612 -244770971 - MIR SINE MIR -20 242 123 1921 125 86 44 chr2 8485829 8486189 -244770394 - THE1C LTR MaLR 0 375 1 299 311 36 24 chr2 8486390 8486557 -244770026 - L1ME4a LINE L1 -18 6103 5935 912 258 26 45 chr2 8486630 8487052 -244769531 - L1ME4a LINE L1 -161 5960 5547 2498 157 9 19 chr2 8488547 8489012 -244767571 - L1MB1 LINE L1 0 6168 5709 217 325 50 0 chr2 8489013 8489093 -244767490 - MIR SINE MIR -110 152 69 376 301 5 88 chr2 8489345 8489387 -244767196 - MER5B DNA MER1_type -1 177 133 2267 43 75 7 chr2 8489387 8489669 -244766914 - AluY SINE Alu -10 301 1 376 301 5 88 chr2 8489669 8489819 -244766764 - MER5B DNA MER1_type -45 133 1 362 266 105 0 chr2 8491592 8491716 -244764867 - MIR SINE MIR -23 239 103 501 211 141 14 chr2 8491956 8492098 -244764485 + MER3 DNA MER1_type 36 195 -14 444 246 42 0 chr2 8494417 8494535 -244762048 - MIR SINE MIR -62 146 24 2362 75 0 13 chr2 8495221 8495526 -244761057 - AluY SINE Alu -10 301 1 180 111 0 0 chr2 8496350 8496377 -244760206 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 645 248 63 33 chr2 8496654 8497079 -244759504 - MLT1C LTR MaLR -3 464 2 280 349 8 31 chr2 8499352 8499481 -244757102 - L3 LINE CR1 -63 1514 1389 241 280 32 32 chr2 8499553 8499646 -244756937 - MIR SINE MIR -74 188 96 239 324 59 35 chr2 8499732 8499902 -244756681 - L3 LINE CR1 -183 1394 1221 2888 131 20 4 chr2 8500026 8500483 -244756100 - L1PA16 LINE L1 0 6166 5703 344 274 228 23 chr2 8501138 8501353 -244755230 + MIR SINE MIR 1 259 -3 528 318 112 9 chr2 8501762 8501995 -244754588 + MIR SINE MIR 3 259 -3 185 91 0 30 chr2 8502814 8502847 -244753736 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 454 359 30 0 chr2 8503654 8503821 -244752762 - MIR SINE MIR -70 192 21 492 269 52 68 chr2 8503833 8504272 -244752311 + L1ME4a LINE L1 5520 5951 -170 382 246 36 14 chr2 8504425 8504563 -244752020 + L1ME4a LINE L1 5965 6105 -16 1354 130 5 0 chr2 8504575 8504782 -244751801 - AluSp SINE Alu -3 310 103 184 264 171 64 chr2 8505885 8506025 -244750558 + MIR3 SINE MIR 30 184 -24 2136 142 52 37 chr2 8506129 8506673 -244749910 + MLT2A2 LTR ERVL 1 554 0 1545 166 18 3 chr2 8507044 8507327 -244749256 - MLT1B LTR MaLR -8 382 96 26 30 0 0 chr2 8507349 8507382 -244749201 + AT_rich Low_complexity Low_complexity 1 33 0 2114 42 98 0 chr2 8507453 8507718 -244748865 - L1PA5 LINE L1 -7 6147 5857 244 246 53 0 chr2 8507718 8507775 -244748808 - MLT1B LTR MaLR -330 60 1 227 347 0 11 chr2 8508006 8508101 -244748482 + MIR SINE MIR 71 164 -98 2601 167 5 14 chr2 8508456 8508888 -244747695 + MSTA LTR MaLR 1 428 0 189 386 0 20 chr2 8509102 8509203 -244747380 + MIR SINE MIR 49 147 -115 218 286 0 32 chr2 8509286 8509349 -244747234 + MIR SINE MIR 196 256 -6 372 284 17 57 chr2 8510459 8510613 -244745970 - MIR SINE MIR -14 248 100 2431 143 59 7 chr2 8510613 8511020 -244745563 + MSTA LTR MaLR 1 428 0 372 284 17 57 chr2 8511020 8511041 -244745542 - MIR SINE MIR -162 100 80 473 168 184 0 chr2 8512219 8512344 -244744239 + LTR16C LTR ERVL 228 375 -116 1154 211 81 88 chr2 8512392 8512485 -244744098 + MLT1C LTR MaLR 16 108 -359 2565 85 48 20 chr2 8512485 8512839 -244743744 - THE1B LTR MaLR 0 364 1 1154 211 81 88 chr2 8512839 8513190 -244743393 + MLT1C LTR MaLR 108 457 -10 421 175 97 35 chr2 8513199 8513313 -244743270 + LTR16C LTR ERVL 371 491 0 241 306 28 0 chr2 8513909 8513981 -244742602 + MIR3 SINE MIR 112 185 -23 208 333 76 49 chr2 8514024 8514168 -244742415 + MIR SINE MIR 109 256 -6 1339 209 23 83 chr2 8514859 8515257 -244741326 - MLT1A2 LTR MaLR 0 374 1 199 286 107 27 chr2 8515436 8515548 -244741035 - MIR SINE MIR -33 229 109 2093 123 3 0 chr2 8515559 8515859 -244740724 + AluSx SINE Alu 1 301 -11 485 353 105 0 chr2 8516712 8516902 -244739681 + MIR SINE MIR 53 262 0 244 264 132 9 chr2 8517481 8517587 -244738996 - MIR SINE MIR -65 197 79 218 81 27 0 chr2 8518326 8518363 -244738220 + (TCC)n Simple_repeat Simple_repeat 1 38 0 263 311 81 20 chr2 8518684 8518832 -244737751 + MIR SINE MIR 71 227 -35 186 328 17 0 chr2 8519152 8519210 -244737373 + L2 LINE L2 3245 3303 -10 321 236 0 0 chr2 8519226 8519298 -244737285 - MIR SINE MIR -138 124 53 501 254 46 130 chr2 8519647 8519727 -244736856 - MIR SINE MIR -2 260 175 1855 130 7 3 chr2 8519727 8520012 -244736571 + AluSx SINE Alu 6 291 -21 225 0 0 0 chr2 8520012 8520037 -244736546 + (TA)n Simple_repeat Simple_repeat 1 25 0 501 254 46 130 chr2 8520037 8520239 -244736344 - MIR SINE MIR -85 177 1 487 290 12 25 chr2 8521080 8521242 -244735341 - MER63 DNA MER1_type -276 786 1 202 133 0 0 chr2 8521486 8521516 -244735067 + MIR SINE MIR 117 146 -62 302 123 18 18 chr2 8522498 8522555 -244734028 + LTR33A LTR ERVL 447 503 -20 290 260 39 13 chr2 8524049 8524126 -244732457 + LTR67 LTR ERVL 99 177 -380 * 716 273 51 72 chr2 8524085 8524514 -244732069 + MLT1L LTR MaLR 196 615 0 328 343 84 17 chr2 8524542 8524720 -244731863 - L1MC4a LINE L1 -1878 5930 5741 422 261 92 15 chr2 8525892 8526022 -244730561 - MIR3 SINE MIR -16 192 53 419 308 39 19 chr2 8526046 8526202 -244730381 - MIR SINE MIR -70 192 34 2504 198 98 100 chr2 8526397 8526463 -244730120 + L1MC3 LINE L1 6840 6905 -880 1684 153 0 27 chr2 8526463 8526757 -244729826 + AluJo SINE Alu 14 299 -13 2504 198 98 100 chr2 8526757 8526971 -244729612 + L1MC3 LINE L1 6905 7118 -667 282 200 0 17 chr2 8526971 8527031 -244729552 + MLT1C LTR MaLR 50 108 -459 2504 198 98 100 chr2 8527031 8527637 -244728946 + L1MC3 LINE L1 7118 7784 -1 411 314 59 12 chr2 8527674 8527843 -244728740 + MER5B DNA MER1_type 2 178 0 213 161 286 0 chr2 8528860 8528916 -244727667 - MIR SINE MIR -121 141 70 453 158 0 0 chr2 8529153 8529229 -244727354 + L1MB3 LINE L1 6101 6176 -7 380 123 14 0 chr2 8530962 8531035 -244725548 + (CA)n Simple_repeat Simple_repeat 1 74 0 192 270 139 74 chr2 8531985 8532200 -244724383 + L2 LINE L2 2437 2665 -649 431 228 18 78 chr2 8532563 8532730 -244723853 + MIR SINE MIR 96 252 -10 2238 113 0 0 chr2 8532924 8533225 -244723358 - AluSq SINE Alu -8 305 5 235 308 0 0 chr2 8533708 8533884 -244722699 + GA-rich Low_complexity Low_complexity 1 176 0 2899 206 113 10 chr2 8533900 8534614 -244721969 + Charlie1a DNA MER1_type 109 896 -559 289 179 0 36 chr2 8535096 8535180 -244721403 - L1MA7 LINE L1 -147 6144 6064 850 105 15 0 chr2 8535180 8535306 -244721277 + L1MA7 LINE L1 6157 6291 0 733 220 77 0 chr2 8535681 8535863 -244720720 + MLT1C LTR MaLR 270 465 -2 406 293 0 0 chr2 8535877 8535976 -244720607 - MIR SINE MIR -107 155 57 255 301 221 15 chr2 8536221 8536420 -244720163 + MIR SINE MIR 22 261 -1 180 380 60 0 chr2 8538205 8538305 -244718278 - MIR SINE MIR -59 203 98 299 309 131 36 chr2 8538439 8538691 -244717892 - L3b LINE CR1 -164 1419 1144 236 306 13 19 chr2 8540720 8540877 -244715706 + CT-rich Low_complexity Low_complexity 2 157 0 250 311 68 0 chr2 8543223 8543326 -244713257 - L2 LINE L2 -214 3058 2949 195 152 0 0 chr2 8543801 8543834 -244712749 - MIR SINE MIR -117 145 113 181 277 15 0 chr2 8544896 8544961 -244711622 + L2 LINE L2 2703 2768 -546 495 243 97 5 chr2 8544975 8545160 -244711423 - MIR SINE MIR -15 247 46 348 254 107 57 chr2 8546951 8547128 -244709455 - MIR SINE MIR -55 207 22 363 195 13 0 chr2 8548261 8548338 -244708245 + MIR SINE MIR 66 143 -119 548 208 104 69 chr2 8548891 8549064 -244707519 + MER63A DNA MER1_type 3 181 -29 456 221 82 76 chr2 8549202 8549360 -244707223 + MIR SINE MIR 17 175 -87 304 346 121 27 chr2 8549440 8550416 -244706167 + L2 LINE L2 1675 2742 -572 411 258 93 7 chr2 8550860 8551011 -244705572 - MER20B DNA MER1_type -604 179 16 338 273 99 16 chr2 8551019 8551140 -244705443 + L2 LINE L2 3142 3272 0 2071 158 92 8 chr2 8552087 8552480 -244704103 + MSTB LTR MaLR 1 426 0 916 278 14 0 chr2 8552674 8552897 -244703686 - MIR SINE MIR -25 237 12 860 273 96 35 chr2 8552912 8553404 -244703179 - MLT1F1 LTR MaLR 0 567 1 3681 215 30 30 chr2 8555360 8555583 -244701000 - Charlie1 DNA MER1_type -7 2754 2532 2378 101 0 3 chr2 8555583 8555891 -244700692 - AluSx SINE Alu -1 311 5 3681 215 30 30 chr2 8555891 8556605 -244699978 - Charlie1 DNA MER1_type -228 2533 1817 383 244 37 37 chr2 8557132 8557267 -244699316 + MIR3 SINE MIR 38 172 -36 2410 208 50 11 chr2 8557584 8558142 -244698441 + MLT1G LTR MaLR 11 590 0 520 314 105 56 chr2 8558210 8559147 -244697436 + L1ME2 LINE L1 4974 7750 -211 324 269 21 78 chr2 8559488 8559629 -244696954 + MER69A DNA AcHobo 28 160 -17 1684 271 39 58 chr2 8560301 8561020 -244695563 + L1M3c LINE L1 1 705 -5436 650 207 8 32 chr2 8561016 8561254 -244695329 + L1M3c LINE L1 1341 1661 -4550 * 463 177 0 0 chr2 8561255 8561334 -244695249 - Tigger5 DNA MER2_type 0 2323 2245 * 1212 211 4 22 chr2 8561328 8561560 -244695023 - Tigger5 DNA MER2_type -2095 228 1 1555 263 99 9 chr2 8561565 8561974 -244694609 + L1M4c LINE L1 1436 1807 -4575 2115 125 0 0 chr2 8561974 8562287 -244694296 - AluSg SINE Alu 0 313 1 1555 263 99 9 chr2 8562287 8563056 -244693527 + L1M4c LINE L1 1807 2760 -3622 1656 104 5 0 chr2 8563056 8563268 -244693315 - AluSq SINE Alu -19 294 82 1555 263 99 9 chr2 8563268 8563387 -244693196 + L1M4c LINE L1 2760 2867 -3515 1770 166 48 17 chr2 8563387 8563594 -244692989 + L1MA9 LINE L1 5105 5304 -1008 7387 21 0 0 chr2 8563594 8564514 -244692069 - L1PA4 LINE L1 -11 6144 5224 1770 166 48 17 chr2 8564514 8565098 -244691485 + L1MA9 LINE L1 5304 6143 -169 1770 139 52 12 chr2 8565098 8565443 -244691140 + L1MA9 LINE L1 5954 6312 0 1770 166 48 17 chr2 8565443 8565619 -244690964 + L1MA9 LINE L1 6143 6312 0 227 250 17 0 chr2 8565663 8565723 -244690860 + L1MB1 LINE L1 6102 6162 -6 2409 84 0 7 chr2 8565725 8566023 -244690560 - AluY SINE Alu -15 296 1 583 264 6 12 chr2 8566048 8566211 -244690372 + L1MA10 LINE L1 6159 6320 -14 596 315 56 24 chr2 8567334 8567744 -244688839 + L1ME4a LINE L1 5699 6121 0 215 315 33 22 chr2 8569984 8570076 -244686507 - MIR SINE MIR -82 180 88 368 210 217 7 chr2 8570303 8570446 -244686137 - MER5A DNA MER1_type -10 179 7 219 346 13 0 chr2 8570667 8570745 -244685838 + L2 LINE L2 3227 3305 -8 1764 192 32 24 chr2 8571040 8571451 -244685132 + MLT2D LTR ERVL 1 414 0 210 233 0 0 chr2 8571802 8571862 -244684721 + GA-rich Low_complexity Low_complexity 2 61 0 307 70 0 0 chr2 8574017 8574060 -244682523 - AluSp/q SINE Alu -8 295 253 193 286 223 0 chr2 8574512 8574624 -244681959 + L2 LINE L2 3136 3272 0 286 250 0 0 chr2 8574821 8574881 -244681702 + L2 LINE L2 2999 3058 -214 194 207 17 0 chr2 8575008 8575066 -244681517 + (CA)n Simple_repeat Simple_repeat 1 59 0 543 281 22 43 chr2 8575555 8575740 -244680843 + MIR SINE MIR 23 203 -59 315 241 139 0 chr2 8575850 8575958 -244680625 - MIR SINE MIR -70 192 70 279 235 113 17 chr2 8576737 8576852 -244679731 - MIR3 SINE MIR -78 130 5 429 242 32 20 chr2 8578564 8578909 -244677674 + (CA)n Simple_repeat Simple_repeat 1 349 0 367 274 0 11 chr2 8579204 8579299 -244677284 + MIR SINE MIR 58 151 -57 376 325 29 10 chr2 8579693 8579899 -244676684 - L1MC4a LINE L1 -1929 5879 5670 252 326 22 0 chr2 8580316 8580405 -244676178 + MIR SINE MIR 120 210 -52 289 190 122 54 chr2 8580981 8581111 -244675472 + MIR SINE MIR 48 140 -68 392 274 46 4 chr2 8582572 8582731 -244673852 - MIR3 SINE MIR 0 262 51 423 239 8 51 chr2 8582742 8582859 -244673724 + L2 LINE L2 3201 3312 -1 279 308 46 39 chr2 8584507 8584637 -244671946 + MIR3 SINE MIR 78 208 0 197 265 0 0 chr2 8585773 8585822 -244670761 - L2 LINE L2 -10 3262 3214 475 263 26 46 chr2 8587160 8587312 -244669271 + MIR SINE MIR 28 176 -86 605 259 7 0 chr2 8587388 8587523 -244669060 + MIR SINE MIR 16 151 -111 431 209 51 82 chr2 8587524 8587682 -244668901 + L1MB4 LINE L1 6022 6174 -6 340 232 11 11 chr2 8587673 8587768 -244668815 + L1MB8 LINE L1 6078 6172 -6 * 374 256 0 60 chr2 8587782 8587915 -244668668 + MIR SINE MIR 137 261 -1 375 320 46 34 chr2 8587928 8588030 -244668553 - MIR SINE MIR -60 202 96 2413 47 34 24 chr2 8588030 8588327 -244668256 - AluY SINE Alu -11 300 1 375 320 46 34 chr2 8588327 8588399 -244668184 - MIR SINE MIR -166 96 26 220 253 195 0 chr2 8590466 8590553 -244666030 - MIR SINE MIR -113 149 46 332 293 69 9 chr2 8590944 8591060 -244665523 - MIR SINE MIR -111 151 29 2370 97 7 0 chr2 8591666 8591964 -244664619 + AluSc SINE Alu 1 300 -9 189 192 14 27 chr2 8591998 8592071 -244664512 + (TA)n Simple_repeat Simple_repeat 1 72 0 242 137 59 0 chr2 8592085 8592136 -244664447 + G-rich Low_complexity Low_complexity 3 56 0 769 97 0 82 chr2 8592137 8592333 -244664250 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 378 123 66 8 chr2 8592443 8592565 -244664018 + (TG)n Simple_repeat Simple_repeat 1 129 0 203 149 0 21 chr2 8592619 8592666 -244663917 + (TG)n Simple_repeat Simple_repeat 1 46 0 198 278 175 0 chr2 8593067 8593164 -244663419 + MIR SINE MIR 15 128 -134 2345 114 0 0 chr2 8593621 8593927 -244662656 + AluSx SINE Alu 1 306 -6 482 319 61 24 chr2 8596304 8596510 -244660073 + L1ME4a LINE L1 5516 5740 -381 2464 96 27 0 chr2 8596510 8596875 -244659708 + L1PA8 LINE L1 5798 6172 0 482 319 61 24 chr2 8596875 8596997 -244659586 + L1ME4a LINE L1 5740 5856 -265 408 250 92 0 chr2 8597237 8597433 -244659150 + L1ME4a LINE L1 5728 5941 -180 24 67 0 0 chr2 8597433 8597478 -244659105 + AT_rich Low_complexity Low_complexity 1 45 0 1901 186 38 39 chr2 8597547 8598152 -244658431 + L1MB7 LINE L1 5015 5674 -510 2230 191 23 29 chr2 8598603 8598690 -244657893 + L1MB7 LINE L1 5652 5738 -446 2091 133 3 7 chr2 8598690 8598999 -244657584 + AluSx SINE Alu 1 308 -4 2230 191 23 29 chr2 8598999 8599428 -244657155 + L1MB7 LINE L1 5738 6165 -19 5509 147 78 31 chr2 8599451 8599783 -244656800 + Tigger3b DNA MER2_type 1 316 -2712 2368 94 0 0 chr2 8599783 8600082 -244656501 - AluSx SINE Alu -13 299 1 5509 147 78 31 chr2 8600082 8600592 -244655991 + Tigger3b DNA MER2_type 316 917 -2111 236 30 30 0 chr2 8600592 8600625 -244655958 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 5509 147 78 31 chr2 8600625 8600955 -244655628 + Tigger3b DNA MER2_type 917 1230 -1 271 352 28 28 chr2 8601918 8602063 -244654520 - L3 LINE CR1 -198 1379 1235 270 276 60 17 chr2 8602555 8602671 -244653912 + MIR3 SINE MIR 58 178 -30 278 311 73 34 chr2 8603814 8603926 -244652657 - MIR SINE MIR -57 205 82 1157 254 88 31 chr2 8603926 8604280 -244652303 - MLT1A2 LTR MaLR 0 374 1 278 311 73 34 chr2 8604280 8604344 -244652239 - MIR SINE MIR -180 82 22 395 36 36 0 chr2 8604345 8604401 -244652182 + (CTACT)n Simple_repeat Simple_repeat 4 61 0 187 339 71 24 chr2 8605760 8605887 -244650696 - MIR SINE MIR -27 235 103 2610 113 6 6 chr2 8605896 8606260 -244650323 - THE1B LTR MaLR 0 364 1 250 307 39 31 chr2 8607095 8607222 -244649361 - MIR3 SINE MIR -16 192 65 1810 189 16 18 chr2 8607251 8607429 -244649154 + MLT1B LTR MaLR 1 178 -212 1627 192 0 26 chr2 8607429 8607741 -244648842 + AluJb SINE Alu 1 304 -8 1810 189 16 18 chr2 8607741 8607943 -244648640 + MLT1B LTR MaLR 178 380 -10 2172 109 0 7 chr2 8608357 8608659 -244647924 - AluSq SINE Alu -13 300 1 542 292 120 5 chr2 8608849 8609058 -244647525 + MIR SINE MIR 5 237 -25 559 266 67 37 chr2 8609648 8609974 -244646609 + MLT1J2 LTR MaLR 64 403 -6 184 219 205 26 chr2 8610312 8610463 -244646120 - L2 LINE L2 -1224 2090 1913 283 342 37 62 chr2 8613113 8613214 -244643369 + HAL1 LINE L1 8 110 -2397 779 228 59 30 chr2 8613214 8613416 -244643167 - MER3 DNA MER1_type -1 208 1 283 342 37 62 chr2 8613416 8613557 -244643026 + HAL1 LINE L1 110 244 -2263 299 312 23 69 chr2 8613560 8613733 -244642850 - MER115 DNA AcHobo -4 689 525 1205 216 24 80 chr2 8613735 8614147 -244642436 - MLT1B LTR MaLR 0 390 2 1055 251 129 34 chr2 8614149 8614528 -244642055 - MER115 DNA AcHobo -168 525 111 229 341 12 0 chr2 8614593 8614678 -244641905 + HAL1 LINE L1 235 320 -2187 1946 267 66 22 chr2 8614708 8615292 -244641291 + HAL1 LINE L1 418 974 -1533 252 0 0 0 chr2 8615292 8615320 -244641263 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1946 267 66 22 chr2 8615320 8615964 -244640619 + HAL1 LINE L1 974 1739 -768 447 35 0 0 chr2 8616050 8616107 -244640476 + (TG)n Simple_repeat Simple_repeat 2 58 0 287 167 0 0 chr2 8616121 8616163 -244640420 - MER41A-int LTR ERV1 -5904 42 1 962 105 13 7 chr2 8616163 8616316 -244640267 - MER41A LTR ERV1 0 554 401 1741 108 105 21 chr2 8616853 8617139 -244639444 + AluSx SINE Alu 3 312 0 208 369 35 35 chr2 8617371 8617512 -244639071 - MIR3 SINE MIR -16 192 52 289 250 117 17 chr2 8617640 8617760 -244638823 + L2 LINE L2 1303 1434 -1880 321 47 0 0 chr2 8617966 8618009 -244638574 + (CA)n Simple_repeat Simple_repeat 2 44 0 324 261 82 89 chr2 8618515 8618795 -244637788 + L2 LINE L2 2839 3116 -156 337 282 85 82 chr2 8620463 8620757 -244635826 - L2 LINE L2 -108 3205 2911 274 209 14 0 chr2 8621847 8621986 -244634597 + (TG)n Simple_repeat Simple_repeat 1 141 0 319 165 0 21 chr2 8622053 8622150 -244634433 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr2 8622151 8622182 -244634401 + (GGGAGA)n Simple_repeat Simple_repeat 3 33 0 914 160 0 41 chr2 8624042 8624211 -244632372 + AluJb SINE Alu 135 296 -16 448 292 39 28 chr2 8624742 8624897 -244631686 + MIR SINE MIR 15 171 -57 1107 160 62 29 chr2 8627116 8627462 -244629121 - MLT1D LTR MaLR -103 402 1 280 261 23 11 chr2 8628565 8628653 -244627930 + MIR SINE MIR 58 146 -116 1530 218 92 23 chr2 8629870 8630306 -244626277 - MLT1C LTR MaLR 0 467 2 1826 160 7 0 chr2 8630549 8630842 -244625741 - AluJo SINE Alu -17 295 1 26 64 0 0 chr2 8630902 8630949 -244625634 + AT_rich Low_complexity Low_complexity 1 47 0 395 301 40 23 chr2 8631067 8631281 -244625302 + MIR SINE MIR 5 228 -34 226 116 58 35 chr2 8632788 8632874 -244623709 + (TATAA)n Simple_repeat Simple_repeat 5 92 0 436 213 24 6 chr2 8632893 8633062 -244623521 + GA-rich Low_complexity Low_complexity 1 172 0 1332 155 24 0 chr2 8635933 8636146 -244620437 + MER20 DNA MER1_type 1 218 -1 514 138 0 0 chr2 8638989 8639069 -244617514 - MLT2B2 LTR ERVL -435 80 1 336 247 21 21 chr2 8639327 8639420 -244617163 + MER115 DNA AcHobo 7 99 -594 1831 184 49 16 chr2 8639439 8639808 -244616775 + MLT1B LTR MaLR 2 382 -8 546 293 105 16 chr2 8639825 8640129 -244616454 + MER115 DNA AcHobo 125 455 -238 22 0 0 0 chr2 8640664 8640686 -244615897 + GC_rich Low_complexity Low_complexity 1 22 0 959 217 27 5 chr2 8641100 8641321 -244615262 + MER52C-int LTR ERV1 2501 2726 -2491 685 201 28 14 chr2 8641367 8641511 -244615072 + MER52C-int LTR ERV1 4545 4690 -1256 293 119 0 0 chr2 8641516 8641558 -244615025 + MER52C-int LTR ERV1 5976 6017 -1188 457 107 57 4 chr2 8641562 8641700 -244614883 + MER52C-int LTR ERV1 6892 7091 0 3660 190 170 18 chr2 8642243 8643174 -244613409 + MER52C LTR ERV1 49 1278 0 254 260 110 0 chr2 8643624 8643724 -244612859 + MLT1H1 LTR MaLR 30 140 -415 198 150 0 0 chr2 8644303 8644343 -244612240 + (TA)n Simple_repeat Simple_repeat 2 41 0 311 276 45 70 chr2 8644345 8644501 -244612082 + L1MCa LINE L1 1922 2073 -4353 * 329 287 25 57 chr2 8644491 8644613 -244611970 + L1MC4 LINE L1 6586 6703 -1339 323 261 23 23 chr2 8644615 8644703 -244611880 + L1MCa LINE L1 1980 2067 -4359 186 200 42 21 chr2 8644703 8644798 -244611785 + (TA)n Simple_repeat Simple_repeat 1 97 0 330 318 24 0 chr2 8644803 8644888 -244611695 - L1MC4 LINE L1 -1340 6702 6616 308 315 0 22 chr2 8644921 8645013 -244611570 + L1MC4 LINE L1 6614 6703 -1339 220 221 16 49 chr2 8645013 8645135 -244611448 + (TATATG)n Simple_repeat Simple_repeat 6 123 0 308 296 48 64 chr2 8645135 8645260 -244611323 - L1MC4 LINE L1 -1339 6703 6581 216 0 0 0 chr2 8645290 8645314 -244611269 + (CA)n Simple_repeat Simple_repeat 1 24 0 647 184 16 68 chr2 8646384 8646528 -244610055 + MER96B DNA MER1_type? 1 134 -283 2990 115 29 2 chr2 8646528 8646972 -244609611 + L1PA16 LINE L1 5708 6163 -3 647 184 16 68 chr2 8646972 8647017 -244609566 + MER96B DNA MER1_type? 134 180 -237 1735 175 52 50 chr2 8647125 8647337 -244609246 - MSTB1 LTR MaLR 0 432 217 1850 168 3 0 chr2 8647337 8647647 -244608936 + AluJb SINE Alu 2 312 0 1735 175 52 50 chr2 8647647 8647834 -244608749 - MSTB1 LTR MaLR -215 217 32 197 275 12 117 chr2 8649450 8649621 -244606962 + MIR SINE MIR 110 262 0 1679 176 14 3 chr2 8649669 8649959 -244606624 + AluJo SINE Alu 1 293 -19 186 258 113 41 chr2 8650278 8650375 -244606208 - L3 LINE CR1 -106 1471 1368 1657 145 7 56 chr2 8651733 8652036 -244604547 + AluJo SINE Alu 1 288 -24 232 221 81 23 chr2 8652177 8652263 -244604320 - L2 LINE L2 0 3272 3182 207 69 0 0 chr2 8652312 8652341 -244604242 + (CCCCCA)n Simple_repeat Simple_repeat 4 32 0 682 197 55 0 chr2 8653648 8653775 -244602808 + FRAM SINE Alu 21 154 -22 205 352 63 0 chr2 8654868 8655010 -244601573 - MER5A DNA MER1_type -14 175 25 249 306 107 68 chr2 8655100 8655437 -244601146 - L2 LINE L2 -95 3177 2828 2412 82 0 0 chr2 8655766 8656058 -244600525 - AluSg SINE Alu -18 292 1 980 144 0 0 chr2 8657278 8657424 -244599159 - AluSg/x SINE Alu -8 302 157 243 296 12 25 chr2 8658369 8658450 -244598133 - MER5A DNA MER1_type 0 189 110 182 259 12 49 chr2 8658396 8658451 -244598132 + MER5A DNA MER1_type 40 93 -96 * 2149 117 23 47 chr2 8658451 8658835 -244597748 - THE1C LTR MaLR 0 375 1 182 259 12 49 chr2 8658835 8658860 -244597723 + MER5A DNA MER1_type 93 117 -72 221 291 46 106 chr2 8658866 8659017 -244597566 - MER5A DNA MER1_type -1 188 47 915 161 0 13 chr2 8659570 8659725 -244596858 + FRAM SINE Alu 24 176 0 2390 69 0 23 chr2 8660037 8660342 -244596241 + AluY SINE Alu 1 298 -13 1596 115 28 45 chr2 8660621 8660864 -244595719 + L1MB3 LINE L1 5892 6138 -45 1788 101 97 4 chr2 8660864 8661122 -244595461 + AluSg SINE Alu 1 282 -28 279 0 0 0 chr2 8661122 8661153 -244595430 + (CA)n Simple_repeat Simple_repeat 2 32 0 1596 115 28 45 chr2 8661153 8661196 -244595387 + L1MB3 LINE L1 6136 6174 -9 434 289 106 41 chr2 8661975 8662445 -244594138 - L1ME3A LINE L1 -217 5953 5450 1157 298 73 28 chr2 8662542 8663009 -244593574 + L2 LINE L2 2826 3313 0 1050 167 5 5 chr2 8663012 8663677 -244592906 + (TGGA)n Simple_repeat Simple_repeat 1 665 0 496 183 17 26 chr2 8664404 8664519 -244592064 + MLT1J1 LTR MaLR 7 120 -326 795 148 11 82 chr2 8664520 8664703 -244591880 + MER20 DNA MER1_type 1 170 -49 507 295 122 24 chr2 8664819 8665114 -244591469 + MLT1J2 LTR MaLR 113 436 -14 260 190 110 70 chr2 8665612 8665712 -244590871 - MER53 DNA DNA -84 105 2 357 273 123 27 chr2 8665714 8665901 -244590682 - MIR SINE MIR -13 249 45 283 376 23 23 chr2 8666241 8666414 -244590169 + MIR SINE MIR 18 190 -72 2003 145 16 10 chr2 8667317 8667448 -244589135 + AluJb SINE Alu 1 130 -182 1903 158 14 3 chr2 8667448 8667740 -244588843 + AluJb SINE Alu 1 295 -17 2003 145 16 10 chr2 8667740 8667911 -244588672 + AluJb SINE Alu 130 305 -7 298 249 107 47 chr2 8668223 8668392 -244588191 - MLT1G LTR MaLR -196 394 216 4057 187 83 71 chr2 8668394 8669940 -244586643 + L1MDa LINE L1 324 2126 -4414 1694 125 21 127 chr2 8669972 8670349 -244586234 + MER1B DNA MER1_type 1 337 0 482 249 71 24 chr2 8670466 8670635 -244585948 + MER5A DNA MER1_type 7 183 -6 232 309 0 64 chr2 8673706 8673816 -244582767 + C-rich Low_complexity Low_complexity 3 105 0 267 31 0 0 chr2 8674070 8674102 -244582481 + (CCG)n Simple_repeat Simple_repeat 2 33 0 399 297 0 14 chr2 8676737 8676882 -244579701 + C-rich Low_complexity Low_complexity 2 144 0 225 0 0 0 chr2 8677834 8677859 -244578724 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr2 8679190 8679213 -244577370 + AT_rich Low_complexity Low_complexity 1 23 0 460 275 66 42 chr2 8681477 8681931 -244574652 - L1M4 LINE L1 -2043 4103 3639 2033 121 29 0 chr2 8682402 8682682 -244573901 + AluJb SINE Alu 1 288 -24 26 30 0 0 chr2 8682683 8682716 -244573867 + AT_rich Low_complexity Low_complexity 1 33 0 1434 308 67 40 chr2 8682801 8683780 -244572803 + L1MEd LINE L1 112 1117 -5002 1891 134 10 23 chr2 8683914 8684213 -244572370 - AluJb SINE Alu -17 295 1 1829 277 71 13 chr2 8684225 8684973 -244571610 + L1MC4a LINE L1 5279 6069 -1739 1775 143 3 28 chr2 8685113 8685399 -244571184 + AluSx SINE Alu 1 279 -33 326 281 45 0 chr2 8685414 8685503 -244571080 - L1MC5 LINE L1 -861 7100 7008 862 290 86 28 chr2 8685601 8686145 -244570438 + L1MC4a LINE L1 6199 6774 -1034 309 259 46 15 chr2 8686173 8686304 -244570279 + L1MC5 LINE L1 6957 7091 -870 311 319 91 55 chr2 8686537 8686844 -244569739 + L1MC5 LINE L1 7249 7566 -395 243 0 0 0 chr2 8686858 8686885 -244569698 + (T)n Simple_repeat Simple_repeat 1 27 0 255 239 11 54 chr2 8686964 8687056 -244569527 + L1MC5 LINE L1 7711 7798 -163 368 309 95 8 chr2 8688216 8688342 -244568241 - L2 LINE L2 0 3272 3136 355 237 200 4 chr2 8688722 8688967 -244567616 + LTR50 LTR ERVL 502 794 -1 405 300 0 0 chr2 8689108 8689268 -244567315 + G-rich Low_complexity Low_complexity 1 160 0 315 142 122 0 chr2 8689369 8689517 -244567066 + (GGATG)n Simple_repeat Simple_repeat 2 167 0 311 164 41 0 chr2 8689520 8689593 -244566990 + GA-rich Low_complexity Low_complexity 1 76 0 2042 138 0 0 chr2 8690071 8690388 -244566195 + AluSx SINE Alu 1 317 0 639 301 109 12 chr2 8690711 8691040 -244565543 - L1MC/D LINE L1 -2073 5735 5375 222 62 0 0 chr2 8691054 8691086 -244565497 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 251 237 30 69 chr2 8691535 8691666 -244564917 - L1MC4a LINE L1 -1634 6174 6049 794 197 72 0 chr2 8691716 8691868 -244564715 + AluJb SINE Alu 136 298 -14 214 304 124 19 chr2 8692020 8692181 -244564402 + L3 LINE CR1 1320 1497 -80 1608 108 0 0 chr2 8692825 8693028 -244563555 + AluSx SINE Alu 1 203 -109 1026 172 10 25 chr2 8693029 8693233 -244563350 + MLT1B LTR MaLR 189 389 -1 237 65 0 0 chr2 8693396 8693427 -244563156 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 56 0 0 chr2 8694284 8694320 -244562263 + AT_rich Low_complexity Low_complexity 1 36 0 328 104 30 0 chr2 8696259 8696326 -244560257 + (TG)n Simple_repeat Simple_repeat 1 69 0 328 128 46 18 chr2 8696373 8696482 -244560101 + (TG)n Simple_repeat Simple_repeat 1 112 0 436 122 68 7 chr2 8696509 8696656 -244559927 + (TG)n Simple_repeat Simple_repeat 1 156 0 349 307 55 24 chr2 8696856 8696983 -244559600 - L2 LINE L2 -474 2840 2710 532 113 0 0 chr2 8697178 8697258 -244559325 + MADE1 DNA Mariner 1 80 0 2017 113 72 0 chr2 8697668 8697959 -244558624 - AluSx SINE Alu 0 312 1 2421 97 3 0 chr2 8698239 8698547 -244558036 + AluSp SINE Alu 1 309 -4 1795 148 56 14 chr2 8698615 8698899 -244557684 + AluJb SINE Alu 1 296 -16 1640 223 122 26 chr2 8699557 8700018 -244556565 + MLT1D LTR MaLR 1 505 0 1470 207 122 3 chr2 8700440 8700595 -244555988 - MSTD LTR MaLR -2 394 259 2233 113 159 5 chr2 8700595 8700966 -244555617 + MSTA LTR MaLR 1 428 0 1470 207 122 3 chr2 8700966 8701162 -244555421 - MSTD LTR MaLR -137 259 1 365 283 30 0 chr2 8701195 8701294 -244555289 + L2 LINE L2 3212 3313 0 282 316 29 76 chr2 8701294 8701465 -244555118 + L3 LINE CR1 1404 1566 -11 450 0 0 0 chr2 8701900 8701950 -244554633 + (TG)n Simple_repeat Simple_repeat 2 51 0 578 129 0 86 chr2 8701964 8702080 -244554503 - AluJ SINE Alu 0 312 207 997 136 0 7 chr2 8702080 8702220 -244554363 - AluJ SINE Alu -169 143 5 395 174 250 45 chr2 8702229 8702361 -244554222 - MLT1F LTR MaLR -383 159 1 216 176 44 0 chr2 8702980 8703048 -244553535 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 2298 53 0 0 chr2 8703141 8703406 -244553177 - AluY SINE Alu -16 295 31 361 271 68 23 chr2 8704849 8704980 -244551603 + MLT1G3 LTR MaLR 26 162 -433 1583 148 5 77 chr2 8704980 8705352 -244551231 - MER4A LTR ERV1 0 664 261 634 128 20 10 chr2 8705349 8705451 -244551132 - MER4A LTR ERV1 -561 103 1 * 521 260 83 76 chr2 8705463 8705881 -244550702 + MLT1G3 LTR MaLR 92 560 -7 2161 204 99 159 chr2 8705929 8706006 -244550577 - Charlie2a DNA MER1_type -6 2856 2776 5335 84 0 15 chr2 8706006 8706676 -244549907 - PABL_A LTR ERV1 0 660 1 2161 204 99 159 chr2 8706676 8707878 -244548705 - Charlie2a DNA MER1_type -86 2776 1673 2037 122 6 34 chr2 8707878 8708198 -244548385 + AluSx SINE Alu 1 311 -1 2161 204 99 159 chr2 8708198 8708375 -244548208 - Charlie2a DNA MER1_type -1189 1673 1487 430 264 227 5 chr2 8708498 8708714 -244547869 - Charlie2a DNA MER1_type -2239 623 360 886 303 130 35 chr2 8709135 8709963 -244546620 - HAL1 LINE L1 0 2507 1601 2533 171 11 18 chr2 8709982 8710437 -244546146 + LOR1b LTR ERV1 10 461 0 2147 252 65 70 chr2 8710439 8710557 -244546026 - HAL1 LINE L1 -916 1591 1474 2111 123 0 3 chr2 8710557 8710872 -244545711 - AluSx SINE Alu 0 314 1 2147 252 65 70 chr2 8710872 8711817 -244544766 - HAL1 LINE L1 -1033 1474 532 342 293 77 90 chr2 8711862 8712241 -244544342 - HAL1 LINE L1 -2044 463 90 463 256 76 33 chr2 8715022 8715233 -244541350 + L1ME3A LINE L1 5727 5946 -224 2425 65 3 0 chr2 8715248 8715539 -244541044 + AluSg SINE Alu 5 296 -14 2497 116 42 11 chr2 8715598 8715951 -244540632 + THE1B LTR MaLR 1 364 0 2118 105 0 36 chr2 8716007 8716311 -244540272 - AluSx SINE Alu -19 293 1 1433 244 31 0 chr2 8716398 8716758 -244539825 - ERVL LTR ERVL -4525 1239 869 1298 241 26 42 chr2 8716854 8717278 -244539305 - MLT2B1 LTR ERVL -103 417 1 1758 156 42 10 chr2 8717363 8717652 -244538931 + AluJo SINE Alu 1 298 -14 23 54 0 0 chr2 8718051 8718088 -244538495 + AT_rich Low_complexity Low_complexity 1 37 0 2779 101 11 16 chr2 8718317 8718694 -244537889 + THE1C LTR MaLR 1 375 0 1014 224 68 87 chr2 8719183 8719598 -244536985 - L1M4 LINE L1 -1022 5124 4718 36 40 0 0 chr2 8719699 8719749 -244536834 + AT_rich Low_complexity Low_complexity 1 50 0 285 239 23 23 chr2 8719846 8719934 -244536649 + L2 LINE L2 1468 1555 -1759 2628 170 19 46 chr2 8720012 8720496 -244536087 + MLT2B2 LTR ERVL 1 472 -43 201 74 0 0 chr2 8720496 8720523 -244536060 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2628 170 19 46 chr2 8720523 8720555 -244536028 + MLT2B2 LTR ERVL 472 503 -12 21 57 0 0 chr2 8720646 8720681 -244535902 + AT_rich Low_complexity Low_complexity 1 35 0 1730 168 0 14 chr2 8720687 8720978 -244535605 - AluJo SINE Alu -15 297 11 1171 123 12 0 chr2 8721741 8721911 -244534672 + AluSg/x SINE Alu 135 306 -4 351 44 0 0 chr2 8722616 8722661 -244533922 + (CA)n Simple_repeat Simple_repeat 2 46 0 260 321 87 38 chr2 8723033 8723217 -244533366 + MIR SINE MIR 14 206 -56 * 543 291 35 0 chr2 8723216 8723357 -244533226 + MIR SINE MIR 97 242 -20 24 53 0 0 chr2 8723556 8723594 -244532989 + AT_rich Low_complexity Low_complexity 1 38 0 225 65 0 0 chr2 8724007 8724038 -244532545 + (ATG)n Simple_repeat Simple_repeat 2 32 0 832 221 106 10 chr2 8724131 8724339 -244532244 + MIR SINE MIR 17 244 -18 334 252 92 25 chr2 8724582 8724701 -244531882 - MER104 DNA Tc2 -49 131 5 22 0 0 0 chr2 8725031 8725053 -244531530 + AT_rich Low_complexity Low_complexity 1 22 0 560 194 0 37 chr2 8725175 8725283 -244531300 + FRAM SINE Alu 38 141 -35 351 195 172 94 chr2 8725527 8725783 -244530800 + MLT1J2 LTR MaLR 2 277 -173 295 248 77 3 chr2 8725831 8725930 -244530653 + MLT1J2 LTR MaLR 345 444 -2 923 131 0 8 chr2 8726377 8726507 -244530076 - FLAM_A SINE Alu -4 129 1 2092 119 3 0 chr2 8726686 8726971 -244529612 - AluSx SINE Alu -24 288 3 1873 161 0 17 chr2 8727059 8727357 -244529226 - AluJb SINE Alu -19 293 1 1695 192 77 0 chr2 8728957 8729280 -244527303 - MER7A DNA MER2_type 0 346 1 1645 132 73 11 chr2 8730486 8730790 -244525793 + AluJo SINE Alu 1 312 0 21 0 0 0 chr2 8734420 8734441 -244522142 + AT_rich Low_complexity Low_complexity 1 21 0 800 197 8 0 chr2 8734689 8734821 -244521762 - FLAM_A SINE Alu 0 133 1 246 255 88 74 chr2 8735550 8735766 -244520817 + L2 LINE L2 3030 3248 -65 1134 192 148 36 chr2 8736441 8736800 -244519783 - MER31B LTR ERV1 -43 423 25 24 32 0 0 chr2 8736940 8736971 -244519612 + AT_rich Low_complexity Low_complexity 1 31 0 2177 121 0 3 chr2 8737675 8737982 -244518601 + AluSx SINE Alu 1 306 -6 483 145 38 0 chr2 8740319 8740415 -244516168 - L1MB8 LINE L1 -275 5899 5798 3564 206 75 11 chr2 8740520 8741374 -244515209 + L1MC4a LINE L1 6900 7808 0 1946 128 6 55 chr2 8743711 8744039 -244512544 + AluSx SINE Alu 1 312 0 1064 181 108 23 chr2 8744554 8744814 -244511769 - AluJo SINE Alu -20 292 11 310 239 163 0 chr2 8745154 8745246 -244511337 + L2 LINE L2 3203 3309 -4 238 247 161 0 chr2 8745880 8745973 -244510610 - MIR SINE MIR -76 186 79 217 195 35 23 chr2 8746479 8746566 -244510017 + (TTATA)n Simple_repeat Simple_repeat 5 92 0 1071 269 143 18 chr2 8747327 8747725 -244508858 - L2 LINE L2 -18 3295 2848 3373 135 67 24 chr2 8748068 8748653 -244507930 + MER4B LTR ERV1 1 610 0 459 33 33 0 chr2 8749663 8749723 -244506860 + AluY SINE Alu 2 63 -250 24 32 0 0 chr2 8749824 8749855 -244506728 + AT_rich Low_complexity Low_complexity 1 31 0 264 319 61 25 chr2 8751067 8751230 -244505353 + L2 LINE L2 2905 3073 -240 1778 286 161 21 chr2 8751544 8752572 -244504011 + L2 LINE L2 191 1362 -1952 278 271 84 60 chr2 8753611 8753862 -244502721 - L2 LINE L2 -920 2394 2138 254 309 40 46 chr2 8753862 8754014 -244502569 + L2 LINE L2 3132 3282 -31 182 233 209 23 chr2 8754045 8754174 -244502409 - L2 LINE L2 -1232 2082 1930 220 186 0 93 chr2 8754304 8754401 -244502182 + GA-rich Low_complexity Low_complexity 5 92 0 2288 92 17 0 chr2 8755775 8756067 -244500516 + AluSx SINE Alu 1 297 -15 316 180 0 0 chr2 8756591 8756652 -244499931 - L1ME4a LINE L1 -1 6120 6060 21 0 0 0 chr2 8756703 8756724 -244499859 + AT_rich Low_complexity Low_complexity 1 21 0 2101 141 0 0 chr2 8756724 8757030 -244499553 + AluSx SINE Alu 1 306 -6 1100 169 0 0 chr2 8757561 8757744 -244498839 - AluJb SINE Alu -10 302 120 410 289 86 119 chr2 8758055 8759029 -244497554 + L2 LINE L2 880 1821 -1493 2098 104 0 0 chr2 8759062 8759367 -244497216 + AluSx SINE Alu 5 309 0 209 262 12 83 chr2 8759391 8759475 -244497108 + L2 LINE L2 1938 2015 -1299 892 226 34 26 chr2 8759485 8759719 -244496864 + MER106A DNA MER1_type 1 236 0 490 265 149 16 chr2 8759721 8760042 -244496541 - L1MC5 LINE L1 -99 7862 7499 1671 121 148 4 chr2 8760360 8760616 -244495967 - AluJb SINE Alu -5 297 5 495 353 154 12 chr2 8760695 8761299 -244495284 + L2 LINE L2 2167 2856 -458 344 348 167 30 chr2 8761328 8761633 -244494950 + L2 LINE L2 2926 3272 0 2136 86 17 7 chr2 8763295 8763585 -244492998 + AluSq SINE Alu 1 293 -20 352 43 0 0 chr2 8763769 8763816 -244492767 - AluY SINE Alu -3 298 252 2365 86 0 10 chr2 8763882 8764184 -244492399 - AluSq SINE Alu -14 299 1 231 133 0 0 chr2 8764223 8764268 -244492315 + (T)n Simple_repeat Simple_repeat 1 45 0 198 0 0 0 chr2 8764297 8764319 -244492264 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr2 8765621 8765642 -244490941 + AT_rich Low_complexity Low_complexity 1 21 0 188 132 151 38 chr2 8766073 8766126 -244490457 - MIR SINE MIR -24 238 180 1315 172 0 5 chr2 8767199 8767420 -244489163 + AluJb SINE Alu 85 304 -8 447 290 189 64 chr2 8768542 8768793 -244487790 - L2 LINE L2 -337 2977 2759 1902 124 57 0 chr2 8768793 8769076 -244487507 - AluJb SINE Alu -13 299 1 447 290 189 64 chr2 8769076 8769824 -244486759 - L2 LINE L2 -555 2759 1853 25 0 0 0 chr2 8773078 8773103 -244483480 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 8773916 8773939 -244482644 + AT_rich Low_complexity Low_complexity 1 23 0 208 379 32 0 chr2 8774439 8774534 -244482049 - MIR SINE MIR -69 139 42 252 0 0 0 chr2 8775458 8775486 -244481097 + (CA)n Simple_repeat Simple_repeat 2 29 0 966 108 0 0 chr2 8775692 8775822 -244480761 - AluSg/x SINE Alu -4 306 177 284 327 9 47 chr2 8775884 8775991 -244480592 - MIR SINE MIR -82 126 24 21 0 0 0 chr2 8778064 8778085 -244478498 + AT_rich Low_complexity Low_complexity 1 21 0 2245 80 0 30 chr2 8778090 8778389 -244478194 + AluSg1 SINE Alu 1 290 -19 379 186 46 56 chr2 8779011 8779134 -244477449 + L1ME LINE L1 5479 5595 -571 230 248 113 68 chr2 8779142 8779275 -244477308 + L1MC4 LINE L1 7903 8041 -1 21 0 0 0 chr2 8781231 8781252 -244475331 + AT_rich Low_complexity Low_complexity 1 21 0 1470 163 21 21 chr2 8782677 8782959 -244473624 - AluJo SINE Alu -30 282 1 1826 143 17 24 chr2 8784615 8784909 -244471674 - AluJb SINE Alu -20 292 1 1692 163 0 14 chr2 8785918 8786194 -244470389 - AluJo SINE Alu -40 272 1 245 339 46 9 chr2 8786387 8786496 -244470087 + L2 LINE L2 3190 3302 -11 21 36 0 0 chr2 8786513 8786541 -244470042 + AT_rich Low_complexity Low_complexity 1 28 0 545 306 75 0 chr2 8788354 8788540 -244468043 + MLT1J LTR MaLR 3 202 -309 518 269 35 29 chr2 8788531 8788702 -244467881 + MLT1J LTR MaLR 340 511 0 * 28 0 0 0 chr2 8788879 8788907 -244467676 + AT_rich Low_complexity Low_complexity 1 28 0 214 292 112 50 chr2 8789100 8789261 -244467322 - MIR SINE MIR -46 216 46 819 266 71 9 chr2 8789864 8790090 -244466493 + MIR SINE MIR 23 262 0 244 200 29 29 chr2 8790280 8790350 -244466233 + GA-rich Low_complexity Low_complexity 4 73 0 778 278 158 11 chr2 8791126 8791627 -244464956 - L2 LINE L2 0 3313 2734 25 31 0 0 chr2 8792938 8792970 -244463613 + AT_rich Low_complexity Low_complexity 1 32 0 437 261 69 0 chr2 8793283 8793413 -244463170 - L2 LINE L2 -15 3298 3160 433 282 115 6 chr2 8793452 8793626 -244462957 + L1ME LINE L1 5586 5778 -343 1641 112 0 60 chr2 8793706 8793956 -244462627 + AluSq SINE Alu 1 235 -78 225 0 0 0 chr2 8793963 8793988 -244462595 + (A)n Simple_repeat Simple_repeat 1 25 0 304 155 0 71 chr2 8794027 8794111 -244462472 + L1ME4a LINE L1 6044 6121 0 238 301 48 10 chr2 8794376 8794479 -244462104 - L1MEd LINE L1 -5996 123 17 3237 136 39 0 chr2 8794758 8795274 -244461309 + Tigger4(Zombi) DNA MER2_type 2196 2731 0 3010 182 56 2 chr2 8795658 8796191 -244460392 + MER68 LTR ERV1 1 562 0 848 67 55 0 chr2 8797356 8797487 -244459096 - LTR12 LTR ERV1 -21 693 270 5022 107 44 92 chr2 8797488 8798465 -244458118 - pTR5 LTR ERV1 -1 2605 1520 3411 95 4 32 chr2 8798462 8798679 -244457904 - HERV9 LTR ERV1 -164 8235 8013 * 2523 62 0 7 chr2 8798679 8798983 -244457600 + AluY SINE Alu 1 302 -9 3411 95 4 32 chr2 8798983 8799259 -244457324 - HERV9 LTR ERV1 -386 8013 7756 2159 182 154 50 chr2 8799253 8800051 -244456532 - HERV9 LTR ERV1 -5176 1720 840 * 30034 112 12 15 chr2 8800050 8805019 -244451564 - HERV9 LTR ERV1 -3212 5045 66 5170 80 50 134 chr2 8805019 8805974 -244450609 - pTR5 LTR ERV1 0 2606 1520 1929 133 32 19 chr2 8806689 8806997 -244449586 - AluSx SINE Alu 0 312 1 2133 143 3 0 chr2 8807027 8807334 -244449249 - AluJb SINE Alu -4 308 1 408 329 62 21 chr2 8807334 8807574 -244449009 - L1M4 LINE L1 -1599 4547 4298 1020 73 0 7 chr2 8808184 8808320 -244448263 + L1PA6 LINE L1 5799 5933 -221 207 114 0 0 chr2 8811180 8811215 -244445368 + (T)n Simple_repeat Simple_repeat 1 35 0 1736 112 4 0 chr2 8811701 8811933 -244444650 - AluSx SINE Alu -79 233 1 1554 194 18 3 chr2 8811959 8812243 -244444340 - AluJb SINE Alu -22 290 3 24 0 0 0 chr2 8812245 8812269 -244444314 + AT_rich Low_complexity Low_complexity 1 24 0 246 250 33 43 chr2 8812468 8812560 -244444023 - MIR SINE MIR -123 139 49 309 200 0 0 chr2 8812927 8812982 -244443601 - MER116 DNA Mariner -9 71 17 1167 241 43 26 chr2 8813068 8813512 -244443071 + L1ME1 LINE L1 5723 6332 -2 21 0 0 0 chr2 8813916 8813937 -244442646 + AT_rich Low_complexity Low_complexity 1 21 0 466 320 47 78 chr2 8815122 8815441 -244441142 + L2 LINE L2 2963 3271 -1 3668 219 58 12 chr2 8815555 8816423 -244440160 - L1M4 LINE L1 -1136 5010 4093 1584 196 38 35 chr2 8816423 8816796 -244439787 - MLT1A2 LTR MaLR 0 374 1 3668 219 58 12 chr2 8816796 8816877 -244439706 - L1M4 LINE L1 -2053 4093 4017 2313 101 0 0 chr2 8817786 8818092 -244438491 - AluSq SINE Alu -7 306 1 1043 230 4 4 chr2 8818402 8818680 -244437903 - L1M4 LINE L1 -2909 3237 2960 397 272 99 8 chr2 8819750 8819937 -244436646 - MIR SINE MIR -19 243 38 2509 67 0 6 chr2 8822385 8822697 -244433886 + AluY SINE Alu 1 310 -1 285 245 38 57 chr2 8823189 8823211 -244433372 + MIR SINE MIR 159 180 -82 1251 124 129 0 chr2 8823211 8823420 -244433163 - MER46A DNA MER2_type 0 236 1 285 245 38 57 chr2 8823420 8823503 -244433080 + MIR SINE MIR 180 262 0 209 220 40 0 chr2 8823511 8823561 -244433022 + L2 LINE L2 3261 3312 -1 3853 132 3 2 chr2 8823723 8824330 -244432253 + L1PB3 LINE L1 5545 6152 -2 198 267 173 40 chr2 8824514 8824589 -244431994 - L2 LINE L2 -6 3266 3182 195 342 127 50 chr2 8824721 8825084 -244431499 - L2 LINE L2 -1 3312 2922 980 199 6 0 chr2 8825626 8825797 -244430786 - FAM SINE Alu -3 172 1 875 271 104 56 chr2 8825840 8826579 -244430004 + L2 LINE L2 2545 3313 0 22 56 0 0 chr2 8827182 8827218 -244429365 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 8828790 8828812 -244427771 + AT_rich Low_complexity Low_complexity 1 22 0 1754 172 0 7 chr2 8830051 8830342 -244426241 + AluJo SINE Alu 1 289 -23 23 33 0 0 chr2 8830342 8830372 -244426211 + AT_rich Low_complexity Low_complexity 1 30 0 252 137 0 0 chr2 8831608 8831659 -244424924 + (TA)n Simple_repeat Simple_repeat 1 51 0 2136 121 7 0 chr2 8832123 8832421 -244424162 + AluSx SINE Alu 1 300 -12 723 195 0 8 chr2 8833424 8833547 -244423036 - FLAM_A SINE Alu -11 122 1 2818 3 0 0 chr2 8833696 8833998 -244422585 + AluYa5 SINE Alu 1 302 -9 777 223 42 0 chr2 8834461 8834654 -244421929 - MER20 DNA MER1_type -2 217 17 332 264 114 36 chr2 8834685 8834852 -244421731 - L2 LINE L2 -78 3235 3056 * 2612 291 128 31 chr2 8834847 8836509 -244420074 - L2 LINE L2 -448 2866 1043 2191 119 3 0 chr2 8837568 8837870 -244418713 - AluSx SINE Alu -9 303 1 350 287 144 23 chr2 8837874 8838048 -244418535 + L2 LINE L2 2823 3017 -296 3383 279 106 28 chr2 8838066 8838123 -244418460 - L2 LINE L2 -38 3275 3224 2216 94 30 0 chr2 8838123 8838422 -244418161 + AluSg SINE Alu 2 309 -1 3383 279 106 28 chr2 8838422 8838470 -244418113 - L2 LINE L2 -89 3224 3181 200 59 29 0 chr2 8838470 8838504 -244418079 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3383 279 106 28 chr2 8838504 8839918 -244416665 - L2 LINE L2 -132 3181 1637 381 257 46 28 chr2 8839987 8840096 -244416487 + L2 LINE L2 3203 3313 0 25 51 0 0 chr2 8840465 8840504 -244416079 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 8840609 8840639 -244415944 + AT_rich Low_complexity Low_complexity 1 30 0 1588 174 18 21 chr2 8841415 8841697 -244414886 - AluJo SINE Alu -31 281 1 221 224 134 30 chr2 8842447 8842514 -244414069 + MER5B DNA MER1_type 2 75 -103 208 331 90 8 chr2 8844065 8844198 -244412385 - MIR SINE MIR -33 229 86 271 191 0 73 chr2 8844515 8844583 -244412000 + L1MC1 LINE L1 7 69 -6357 9188 198 63 29 chr2 8844583 8844604 -244411979 + L1MC1 LINE L1 2001 2020 -4593 352 51 34 0 chr2 8844604 8844663 -244411920 + (TG)n Simple_repeat Simple_repeat 2 62 0 9188 198 63 29 chr2 8844663 8845937 -244410646 + L1MC1 LINE L1 2020 3249 -3364 1917 145 30 3 chr2 8845937 8846241 -244410342 + AluJb SINE Alu 1 312 0 9188 198 63 29 chr2 8846241 8847009 -244409574 + L1MC1 LINE L1 3249 3989 -2624 2177 112 3 13 chr2 8847009 8847312 -244409271 + AluSq SINE Alu 1 300 -13 9188 198 63 29 chr2 8847312 8849680 -244406903 + L1MC1 LINE L1 3989 6593 -20 198 103 0 0 chr2 8849689 8849718 -244406865 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1680 187 14 0 chr2 8851681 8851970 -244404613 - AluJb SINE Alu -19 293 1 275 240 264 8 chr2 8852373 8852502 -244404081 + MER103 DNA DNA 1 162 -4 2291 91 3 3 chr2 8852576 8852873 -244403710 - AluSq SINE Alu -16 297 1 24 0 0 0 chr2 8853474 8853498 -244403085 + AT_rich Low_complexity Low_complexity 1 24 0 2379 65 0 10 chr2 8853588 8853894 -244402689 - AluY SINE Alu -8 303 1 255 186 47 0 chr2 8855664 8855707 -244400876 + MER57A LTR ERV1 295 339 -64 615 173 43 81 chr2 8855773 8855958 -244400625 - MER104 DNA MER2_type -1 179 2 467 304 100 43 chr2 8856288 8856778 -244399805 + L1MC/D LINE L1 4859 5376 -770 231 139 47 0 chr2 8856778 8856821 -244399762 - U2 snRNA snRNA -143 45 1 614 252 145 16 chr2 8856845 8857087 -244399496 + L1MC/D LINE L1 5392 5664 -457 282 216 149 0 chr2 8857160 8857234 -244399349 + L1MC/D LINE L1 5678 5762 -2046 23 33 0 0 chr2 8857473 8857503 -244399080 + AT_rich Low_complexity Low_complexity 1 30 0 1615 155 53 8 chr2 8857530 8857794 -244398789 + AluJo SINE Alu 1 276 -36 1527 161 8 4 chr2 8857794 8858043 -244398540 - AluJo SINE Alu -62 250 1 433 198 10 30 chr2 8860720 8860821 -244395762 - AluJo SINE Alu -162 150 52 206 293 17 0 chr2 8861528 8861586 -244394997 + MIR SINE MIR 85 143 -65 923 183 6 23 chr2 8862188 8862363 -244394220 - FRAM SINE Alu -5 171 1 1125 321 130 19 chr2 8864386 8864549 -244392034 - L2 LINE L2 -37 3276 3132 1926 144 3 10 chr2 8864549 8864840 -244391743 + AluJb SINE Alu 1 289 -23 1125 321 130 19 chr2 8864840 8865584 -244390999 - L2 LINE L2 -181 3132 2251 722 197 8 0 chr2 8866654 8866781 -244389802 + FLAM_C SINE Alu 1 128 -5 25 65 0 0 chr2 8867542 8867588 -244388995 + AT_rich Low_complexity Low_complexity 1 46 0 2663 218 59 26 chr2 8867696 8868390 -244388193 - MER21B LTR ERV1 -49 814 98 226 225 11 101 chr2 8868509 8868598 -244387985 - MER21B LTR ERV1 -766 97 17 1635 191 38 0 chr2 8868605 8868920 -244387663 + MER7A DNA MER2_type 21 345 -1 25 0 0 0 chr2 8869310 8869335 -244387248 + AT_rich Low_complexity Low_complexity 1 25 0 1985 138 7 7 chr2 8869518 8869807 -244386776 - AluSx SINE Alu -23 289 1 327 271 97 32 chr2 8869978 8870133 -244386450 - MIR SINE MIR -48 214 50 856 171 14 47 chr2 8870319 8870530 -244386053 + MER3 DNA MER1_type 1 204 -5 2059 149 0 7 chr2 8870769 8871071 -244385512 + AluSx SINE Alu 4 303 -9 2150 113 0 14 chr2 8871927 8872247 -244384336 - AluSx SINE Alu 0 312 1 45 34 0 0 chr2 8872393 8872452 -244384131 + AT_rich Low_complexity Low_complexity 1 59 0 2307 92 7 0 chr2 8873430 8873725 -244382858 + AluSx SINE Alu 1 297 -15 489 228 0 35 chr2 8873889 8874034 -244382549 - L1ME3 LINE L1 -1 6161 6022 24 67 0 0 chr2 8874465 8874510 -244382073 + AT_rich Low_complexity Low_complexity 1 45 0 251 111 0 22 chr2 8874746 8874791 -244381792 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 2280 97 0 16 chr2 8875856 8876166 -244380417 + AluSg SINE Alu 1 305 -5 1589 192 65 107 chr2 8876513 8877206 -244379377 + L1MC4a LINE L1 6840 7503 -305 2047 147 13 0 chr2 8877333 8877640 -244378943 + AluJb SINE Alu 1 311 -1 1865 128 0 4 chr2 8877640 8877905 -244378678 + AluSx SINE Alu 41 304 -8 503 351 26 22 chr2 8878488 8878719 -244377864 + MIR SINE MIR 5 236 -26 23 33 0 0 chr2 8879427 8879457 -244377126 + AT_rich Low_complexity Low_complexity 1 30 0 2178 107 3 3 chr2 8881756 8882047 -244374536 + AluSx SINE Alu 1 291 -21 266 248 198 66 chr2 8882504 8882625 -244373958 + L2 LINE L2 3136 3272 0 209 138 100 12 chr2 8883334 8883414 -244373169 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 242 273 163 12 chr2 8883743 8883915 -244372668 + MLT1J LTR MaLR 314 511 0 320 222 58 125 chr2 8884450 8884554 -244372029 + MARNA DNA Mariner 91 200 -386 1865 142 16 32 chr2 8884554 8884863 -244371720 + AluJb SINE Alu 1 304 -8 320 222 58 125 chr2 8884863 8885069 -244371514 + MARNA DNA Mariner 200 380 -206 1615 164 82 0 chr2 8885186 8885467 -244371116 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 8885647 8885668 -244370915 + AT_rich Low_complexity Low_complexity 1 21 0 202 333 83 30 chr2 8886306 8886438 -244370145 + MIR SINE MIR 124 262 0 1762 168 7 3 chr2 8886614 8886917 -244369666 + AluJb SINE Alu 2 305 -7 2619 153 12 36 chr2 8886925 8887305 -244369278 + L1MB2 LINE L1 5681 6048 -123 2096 127 3 3 chr2 8887305 8887605 -244368978 + AluSx SINE Alu 1 300 -12 2619 153 12 36 chr2 8887605 8887726 -244368857 + L1MB2 LINE L1 6048 6170 -1 197 116 0 47 chr2 8887777 8887820 -244368763 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2184 79 20 17 chr2 8888019 8888311 -244368272 + AluY SINE Alu 2 294 -17 2353 90 7 0 chr2 8888541 8888851 -244367732 + AluSp SINE Alu 1 312 -1 194 135 27 0 chr2 8889139 8889176 -244367407 + L2 LINE L2 3273 3310 -3 883 237 53 40 chr2 8889558 8889879 -244366704 + L2 LINE L2 2333 2657 -657 913 99 46 7 chr2 8889883 8890035 -244366548 + L1MA7 LINE L1 6128 6285 -6 707 233 45 11 chr2 8890047 8890223 -244366360 - MER5A DNA MER1_type -6 183 2 435 324 97 29 chr2 8890223 8890705 -244365878 + L2 LINE L2 2709 3225 -88 763 236 68 8 chr2 8890711 8890948 -244365635 + L1ME1 LINE L1 4923 5173 -973 939 261 40 40 chr2 8890960 8891285 -244365298 + MLT1-int LTR MaLR 1046 1370 -1 928 243 41 4 chr2 8891285 8891540 -244365043 + L1ME1 LINE L1 5895 6159 -7 270 174 0 0 chr2 8891554 8891600 -244364983 + LTR56 LTR ERV1 349 394 -51 445 224 220 22 chr2 8891613 8891965 -244364618 + L1ME4a LINE L1 5601 6049 -72 2248 118 0 0 chr2 8892635 8892931 -244363652 - AluJb SINE Alu -16 296 1 208 340 10 10 chr2 8893160 8893263 -244363320 + L2 LINE L2 2594 2696 -618 1375 167 19 55 chr2 8893670 8893982 -244362601 - L1MA4 LINE L1 -3 6297 5997 205 283 50 0 chr2 8894039 8894099 -244362484 + MIR SINE MIR 197 259 -3 23 78 0 0 chr2 8894218 8894269 -244362314 + AT_rich Low_complexity Low_complexity 1 51 0 371 365 54 12 chr2 8894270 8894437 -244362146 + L2 LINE L2 3098 3271 -1 612 262 57 94 chr2 8894945 8895468 -244361115 + L2 LINE L2 2673 3312 -1 242 0 61 0 chr2 8895578 8895611 -244360972 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1770 156 3 27 chr2 8895618 8895919 -244360664 - AluJo SINE Alu -18 294 1 207 324 28 0 chr2 8895940 8896011 -244360572 + L2 LINE L2 3223 3295 -18 657 82 0 10 chr2 8896355 8896453 -244360130 + AluJb SINE Alu 209 305 -7 562 242 24 30 chr2 8897192 8897357 -244359226 - MER5A DNA MER1_type 0 189 26 205 308 51 13 chr2 8897511 8897589 -244358994 + MER5A DNA MER1_type 70 150 -39 180 121 15 61 chr2 8898435 8898501 -244358082 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 1683 139 3 86 chr2 8898949 8899276 -244357307 + AluJo SINE Alu 5 306 0 2410 117 5 8 chr2 8899438 8899814 -244356769 - THE1C LTR MaLR 0 375 1 1812 160 37 7 chr2 8900463 8900763 -244355820 - AluSx SINE Alu -3 309 1 564 229 118 0 chr2 8900962 8901106 -244355477 + MLT1J2 LTR MaLR 244 404 -46 197 214 48 0 chr2 8901848 8901890 -244354693 - L2 LINE L2 -50 3222 3179 350 254 64 0 chr2 8904359 8904469 -244352114 + MLT1G1 LTR MaLR 1 117 -478 228 286 0 0 chr2 8904674 8904730 -244351853 + GA-rich Low_complexity Low_complexity 2 57 0 250 235 17 101 chr2 8904888 8905007 -244351576 + MLT1J2 LTR MaLR 451 559 -36 285 299 103 25 chr2 8905691 8905895 -244350688 + MLT1J-int LTR MaLR 1148 1367 -4 2384 145 43 17 chr2 8905984 8906405 -244350178 + MSTB1 LTR MaLR 1 432 0 246 273 0 15 chr2 8906412 8906478 -244350105 + MLT1J LTR MaLR 64 128 -427 5669 153 48 5 chr2 8906482 8906760 -244349823 + L1PB1 LINE L1 3868 4133 -2018 1082 47 24 12 chr2 8906760 8906930 -244349653 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 5669 153 48 5 chr2 8906930 8908759 -244347824 + L1PB1 LINE L1 4133 6069 -82 356 161 0 0 chr2 8908831 8908893 -244347690 - MER63 DNA MER1_type -756 305 244 272 246 0 0 chr2 8908866 8908927 -244347656 + MER63 DNA MER1_type 464 524 -536 * 771 228 51 30 chr2 8908969 8909206 -244347377 - MER63 DNA MER1_type -815 246 5 986 165 79 43 chr2 8909209 8909444 -244347139 + MER33 DNA MER1_type 24 272 -2313 2368 107 7 0 chr2 8909444 8909752 -244346831 - AluSx SINE Alu -2 310 1 986 165 79 43 chr2 8909752 8909795 -244346788 + MER33 DNA MER1_type 272 312 -12 450 247 96 18 chr2 8909850 8910016 -244346567 + MLT1J LTR MaLR 231 409 -102 207 0 0 0 chr2 8910045 8910068 -244346515 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 229 300 43 0 chr2 8910347 8910417 -244346166 + MIR SINE MIR 74 146 -116 314 286 64 82 chr2 8910618 8910838 -244345745 + MLT1L LTR MaLR 389 604 -11 2751 227 77 11 chr2 8911383 8912695 -244343888 + L1ME2 LINE L1 4705 6106 -58 1004 187 61 53 chr2 8912862 8913124 -244343459 - Tigger1 DNA MER2_type -2141 277 14 3803 210 78 29 chr2 8913276 8914271 -244342312 - L1MB7 LINE L1 -10 6174 5229 1655 163 10 42 chr2 8914271 8914577 -244342006 - AluJo SINE Alu -14 298 3 3803 210 78 29 chr2 8914577 8915430 -244341153 - L1MB7 LINE L1 -955 5229 4250 2044 258 134 31 chr2 8915429 8916946 -244339637 - L1M4b LINE L1 -3954 3184 1331 * 847 225 136 108 chr2 8917473 8918174 -244338409 + LTR8A LTR ERV1 1 720 -7 400 233 25 63 chr2 8918202 8918361 -244338222 - L1M4b LINE L1 -6320 535 383 284 274 82 0 chr2 8920179 8920252 -244336331 - L2 LINE L2 -57 3215 3137 517 167 175 8 chr2 8920311 8920437 -244336146 + MER104 DNA Tc2 31 177 -3 568 251 114 0 chr2 8920439 8920606 -244335977 - MIR SINE MIR -63 199 14 963 182 0 28 chr2 8920625 8920801 -244335782 - AluJb SINE Alu 0 312 142 243 282 94 0 chr2 8921401 8921486 -244335097 - MIR SINE MIR -7 255 163 2679 133 27 0 chr2 8922344 8922758 -244333825 - MSTA LTR MaLR -3 425 1 1192 200 61 19 chr2 8922986 8923465 -244333118 - Charlie1b DNA MER1_type 0 523 1 366 80 0 0 chr2 8923830 8923880 -244332703 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 1844 166 0 3 chr2 8923880 8924164 -244332419 - AluJb SINE Alu -29 283 1 627 118 0 0 chr2 8924185 8924278 -244332305 - L1P4 LINE L1 -469 5705 5613 3711 45 68 0 chr2 8924282 8924799 -244331784 + LTR30 LTR ERV1 1 552 -170 3237 16 3 0 chr2 8924799 8925185 -244331398 - L1PA4 LINE L1 -208 5947 5561 1594 45 0 0 chr2 8925185 8925387 -244331196 + L1PA4 LINE L1 5952 6153 -2 1307 78 6 0 chr2 8925387 8925566 -244331017 + LTR30 LTR ERV1 543 722 0 3426 81 15 68 chr2 8925566 8925854 -244330729 - L1PA8A LINE L1 -499 5632 5330 412 89 0 0 chr2 8925854 8925910 -244330673 - MSTA LTR MaLR -95 333 278 3426 81 15 68 chr2 8925910 8926480 -244330103 - L1PA8A LINE L1 -801 5330 4770 376 255 101 90 chr2 8927126 8927314 -244329269 + MIR SINE MIR 56 245 -17 1463 190 30 7 chr2 8927878 8928147 -244328436 - AluJo SINE Alu -30 282 8 292 327 9 47 chr2 8930613 8930720 -244325863 - MIR SINE MIR -82 126 24 272 279 29 0 chr2 8931050 8931118 -244325465 + L2 LINE L2 3153 3222 -50 2107 99 7 20 chr2 8931421 8931715 -244324868 + AluSg SINE Alu 21 310 0 222 37 0 0 chr2 8931723 8931750 -244324833 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 466 248 14 43 chr2 8932673 8932814 -244323769 - L2 LINE L2 0 3272 3136 2302 106 0 3 chr2 8935181 8935492 -244321091 - AluSx SINE Alu -2 310 1 744 100 27 0 chr2 8936307 8936417 -244320166 + MER3 DNA MER1_type 1 113 -96 1050 98 92 0 chr2 8936419 8936572 -244320011 + AluSg/x SINE Alu 137 303 -7 417 214 102 10 chr2 8936572 8936670 -244319913 + MER3 DNA MER1_type 103 209 0 197 257 139 0 chr2 8937334 8937435 -244319148 + L2 LINE L2 2230 2344 -970 * 251 300 29 0 chr2 8937433 8937503 -244319080 - L2 LINE L2 0 3313 3242 812 239 25 5 chr2 8937711 8937908 -244318675 + MER20 DNA MER1_type 1 201 -18 2197 113 0 3 chr2 8938769 8939062 -244317521 - AluSg SINE Alu -18 292 1 324 0 0 0 chr2 8939548 8939584 -244316999 + (CA)n Simple_repeat Simple_repeat 2 37 0 321 275 107 20 chr2 8940234 8940383 -244316200 + MIR SINE MIR 101 262 0 417 320 64 0 chr2 8940770 8940895 -244315688 - L2 LINE L2 -1 3271 3139 450 344 0 7 chr2 8941088 8941242 -244315341 - MIR SINE MIR -109 153 1 9436 136 25 11 chr2 8941367 8942991 -244313592 + Tigger1 DNA MER2_type 1 1647 -771 435 52 0 0 chr2 8943175 8943233 -244313350 + (TA)n Simple_repeat Simple_repeat 2 59 0 1317 164 36 73 chr2 8943233 8943507 -244313076 - AluJb SINE Alu -2 310 47 25 0 0 0 chr2 8943515 8943540 -244313043 + AT_rich Low_complexity Low_complexity 1 25 0 2378 91 3 0 chr2 8943741 8944037 -244312546 - AluSp SINE Alu -16 297 1 593 223 152 40 chr2 8944124 8944348 -244312235 - LTR50 LTR ERVL -356 439 191 189 0 0 0 chr2 8944529 8944550 -244312033 + (A)n Simple_repeat Simple_repeat 1 21 0 416 301 124 16 chr2 8945013 8945199 -244311384 - MIR3 SINE MIR -1 207 2 334 277 187 24 chr2 8945453 8945619 -244310964 - MIR SINE MIR -50 212 20 776 204 15 91 chr2 8946684 8947013 -244309570 + L1MC4 LINE L1 7738 8041 -1 358 250 36 18 chr2 8947306 8947418 -244309165 + MIR SINE MIR 31 144 -118 2219 106 10 0 chr2 8947541 8947834 -244308749 - AluSx SINE Alu -16 296 1 195 218 0 0 chr2 8948557 8948612 -244307971 + GA-rich Low_complexity Low_complexity 3 57 0 1127 157 41 83 chr2 8949248 8949490 -244307093 + AluJb SINE Alu 79 310 -2 408 55 0 0 chr2 8949492 8949547 -244307036 + (TA)n Simple_repeat Simple_repeat 2 56 0 279 282 56 51 chr2 8949853 8950069 -244306514 - L1MEd LINE L1 -4881 1238 1022 29 28 0 0 chr2 8950214 8950250 -244306333 + AT_rich Low_complexity Low_complexity 1 36 0 1887 143 14 0 chr2 8950690 8951011 -244305572 + AluSx SINE Alu 1 325 0 1294 251 256 3 chr2 8951091 8951725 -244304858 - LTR50 LTR ERVL -1 794 1 1469 174 14 56 chr2 8951944 8952231 -244304352 + AluJo SINE Alu 1 275 -37 560 119 50 0 chr2 8952268 8952369 -244304214 + L1MC4a LINE L1 6890 6995 -813 1714 176 41 13 chr2 8952499 8952890 -244303693 - LTR52 LTR ERVL -9 412 11 2046 160 21 0 chr2 8952910 8953285 -244303298 + MLT1B LTR MaLR 1 383 -7 2188 121 3 3 chr2 8953996 8954301 -244302282 + AluSx SINE Alu 6 310 -2 270 293 98 12 chr2 8954307 8954389 -244302194 + MIR SINE MIR 20 108 -154 2289 102 10 0 chr2 8954569 8954862 -244301721 - AluSp SINE Alu -17 296 1 21 36 0 0 chr2 8954868 8954896 -244301687 + AT_rich Low_complexity Low_complexity 1 28 0 468 239 118 31 chr2 8955928 8956296 -244300287 - L1ME LINE L1 -528 5593 5175 225 132 0 26 chr2 8957007 8957045 -244299538 + MER3 DNA MER1_type 46 82 -127 513 225 17 0 chr2 8957488 8957608 -244298975 + MER33 DNA MER1_type 1 122 -202 283 329 50 56 chr2 8957664 8957825 -244298758 - MER5A DNA MER1_type -12 177 18 586 298 116 6 chr2 8957923 8958285 -244298298 + L1ME3 LINE L1 5428 5829 -333 747 256 53 112 chr2 8958828 8959234 -244297349 - L1MC4 LINE L1 -561 7481 7130 437 90 15 0 chr2 8959234 8959301 -244297282 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 747 256 53 112 chr2 8959301 8959574 -244297009 - L1MC4 LINE L1 -912 7130 6842 2384 174 133 2 chr2 8959744 8960197 -244296386 - MLT2B2 LTR ERVL -3 512 1 801 248 188 14 chr2 8960209 8960682 -244295901 - MLT1H LTR MaLR -5 550 1 1250 108 0 0 chr2 8961519 8961676 -244294907 + AluSq SINE Alu 1 157 -156 1556 88 83 5 chr2 8961676 8961893 -244294690 + L1PB1 LINE L1 5918 6151 0 23 0 0 0 chr2 8961893 8961916 -244294667 + AT_rich Low_complexity Low_complexity 1 23 0 4827 135 8 23 chr2 8961935 8962721 -244293862 + L1PB4 LINE L1 5378 6151 -5 396 0 0 0 chr2 8963085 8963129 -244293454 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 264 208 65 83 chr2 8964493 8964638 -244291945 + LTR47B LTR ERVL 254 384 -27 696 180 55 97 chr2 8964663 8964880 -244291703 - MER3 DNA MER1_type -1 208 1 2195 112 3 0 chr2 8965691 8965996 -244290587 + AluSq SINE Alu 1 306 -7 610 297 108 0 chr2 8966369 8966591 -244289992 - MIR SINE MIR -12 250 5 2048 124 0 17 chr2 8966618 8966945 -244289638 - AluSx SINE Alu 0 312 1 214 158 53 35 chr2 8967512 8967569 -244289014 + C-rich Low_complexity Low_complexity 1 58 0 22 99 0 0 chr2 8967678 8967749 -244288834 + GC_rich Low_complexity Low_complexity 1 71 0 510 246 222 10 chr2 8968489 8968696 -244287887 - MIR SINE MIR -3 259 9 576 97 0 0 chr2 8969423 8969495 -244287088 + AluJ/FRAM SINE Alu 222 293 -19 2086 113 17 13 chr2 8969497 8969798 -244286785 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr2 8969812 8969837 -244286746 + (GA)n Simple_repeat Simple_repeat 2 26 0 710 274 87 17 chr2 8969900 8970130 -244286453 + MIR SINE MIR 3 248 -14 2466 188 33 35 chr2 8970131 8970202 -244286381 - MLT2B1 LTR ERVL -3 517 447 481 75 12 12 chr2 8970202 8970282 -244286301 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2466 188 33 35 chr2 8970282 8970722 -244285861 - MLT2B1 LTR ERVL -73 447 7 192 189 0 0 chr2 8971010 8971047 -244285536 - MIR SINE MIR -10 252 216 433 285 27 43 chr2 8971182 8971348 -244285235 + MIR SINE MIR 19 180 -66 205 262 110 84 chr2 8971920 8972111 -244284472 + MIR3 SINE MIR 5 200 -8 528 229 260 10 chr2 8973603 8973795 -244282788 + MIR SINE MIR 22 261 -1 186 174 0 0 chr2 8973800 8973846 -244282737 + (CAT)n Simple_repeat Simple_repeat 3 48 0 1609 106 5 0 chr2 8973923 8974140 -244282443 + L1PA10 LINE L1 5949 6166 -2 351 351 27 21 chr2 8974903 8975091 -244281492 + MER5A DNA MER1_type 1 189 0 1120 244 65 90 chr2 8975763 8975874 -244280709 - HAL1 LINE L1 -29 2478 2366 2045 108 19 54 chr2 8975874 8976190 -244280393 - AluSx SINE Alu -7 305 1 1120 244 65 90 chr2 8976190 8976590 -244279993 - HAL1 LINE L1 -141 2366 1980 410 329 40 13 chr2 8976700 8976928 -244279655 - HAL1 LINE L1 -510 1997 1764 513 180 39 47 chr2 8977103 8977231 -244279352 + MER106A DNA MER1_type 108 234 -2 235 323 21 0 chr2 8977310 8977403 -244279180 - LTR67 LTR ERVL -367 190 96 1539 208 90 32 chr2 8977485 8977984 -244278599 - HAL1 LINE L1 -910 1597 1070 2302 116 0 19 chr2 8978436 8978754 -244277829 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 8979037 8979059 -244277524 + AT_rich Low_complexity Low_complexity 1 22 0 353 205 36 12 chr2 8980262 8980345 -244276238 - L2 LINE L2 0 3313 3229 27 62 0 0 chr2 8980829 8980877 -244275706 + AT_rich Low_complexity Low_complexity 1 48 0 632 115 0 0 chr2 8981200 8981287 -244275296 + L1PA5 LINE L1 10 96 -6365 * 38548 51 6 1 chr2 8981254 8986802 -244269781 + L1PA5 LINE L1 893 6469 0 459 266 120 30 chr2 8986865 8987132 -244269451 + L1MC/D LINE L1 5254 5544 -2264 928 293 120 13 chr2 8987367 8987818 -244268765 + MLT1L LTR MaLR 24 522 -93 210 275 0 58 chr2 8988979 8989048 -244267535 - L2 LINE L2 -66 3206 3142 17757 186 53 18 chr2 8989187 8990316 -244266267 - L1PA15-16 LINE L1 -948 5901 4813 2295 82 0 0 chr2 8990316 8990624 -244265959 - AluY SINE Alu 0 308 1 17757 186 53 18 chr2 8990624 8991105 -244265478 - L1PA15-16 LINE L1 -2036 4813 4350 2162 135 0 0 chr2 8991105 8991402 -244265181 - AluSx SINE Alu -15 297 1 17757 186 53 18 chr2 8991402 8995517 -244261066 - L1PA15-16 LINE L1 -2499 4350 10 3402 126 23 6 chr2 8995533 8996050 -244260533 + Tigger1 DNA MER2_type 1893 2418 0 1702 180 27 23 chr2 8996314 8996614 -244259969 + AluJo SINE Alu 1 301 -11 429 220 86 59 chr2 8996928 8997114 -244259469 + L1MC5 LINE L1 7717 7907 -54 1945 174 0 3 chr2 8999347 8999658 -244256925 - AluJb SINE Alu -2 310 1 194 204 0 23 chr2 9000182 9000226 -244256357 - L2 LINE L2 0 3272 3230 224 246 87 14 chr2 9000637 9000706 -244255877 + MER5A DNA MER1_type 63 136 -53 322 326 183 15 chr2 9001004 9001332 -244255251 + L1MC/D LINE L1 5274 5656 -2152 299 342 0 8 chr2 9001637 9001754 -244254829 + LTR16B LTR ERVL 1 116 -348 267 259 88 31 chr2 9001824 9002017 -244254566 + LTR16B LTR ERVL 261 464 0 359 208 13 0 chr2 9002021 9002098 -244254485 - MIR SINE MIR -47 215 138 246 156 0 0 chr2 9002544 9002589 -244253994 + (CA)n Simple_repeat Simple_repeat 1 45 0 207 0 0 0 chr2 9004345 9004368 -244252215 + (CA)n Simple_repeat Simple_repeat 1 23 0 426 222 51 34 chr2 9004371 9004488 -244252095 + HAL1 LINE L1 795 913 -1594 1936 219 103 87 chr2 9004683 9004830 -244251753 + HAL1 LINE L1 964 1107 -1400 2209 105 0 7 chr2 9004830 9005125 -244251458 + AluSp SINE Alu 3 295 -18 1936 219 103 87 chr2 9005125 9005353 -244251230 + HAL1 LINE L1 1107 1330 -1177 2101 121 0 23 chr2 9005353 9005658 -244250925 + AluSx SINE Alu 1 298 -14 1936 219 103 87 chr2 9005658 9005802 -244250781 + HAL1 LINE L1 1330 1470 -1037 2420 57 3 3 chr2 9005802 9006098 -244250485 + AluY SINE Alu 1 296 -15 1936 219 103 87 chr2 9006098 9006515 -244250068 + HAL1 LINE L1 1470 1917 -590 277 271 35 104 chr2 9006601 9006967 -244249616 + HAL1 LINE L1 1849 2189 -318 5120 151 33 53 chr2 9006971 9007849 -244248734 + L1MB7 LINE L1 4901 5740 -444 2718 109 3 8 chr2 9007849 9008215 -244248368 - THE1B LTR MaLR 0 364 1 5120 151 33 53 chr2 9008215 9008639 -244247944 + L1MB7 LINE L1 5740 6171 -13 28425 34 0 0 chr2 9008659 9014824 -244241759 + L1PA4 LINE L1 4 6169 0 2408 81 3 0 chr2 9014826 9015121 -244241462 + AluSg SINE Alu 1 296 -14 374 291 108 24 chr2 9015121 9015416 -244241167 + HAL1 LINE L1 2187 2506 -1 429 293 73 24 chr2 9015733 9015938 -244240645 + MIR SINE MIR 37 251 -11 226 318 106 65 chr2 9016326 9016543 -244240040 + MIR SINE MIR 31 256 -6 1576 172 11 8 chr2 9016969 9017230 -244239353 - AluJb SINE Alu -44 268 7 345 267 151 5 chr2 9017262 9017496 -244239087 - L1ME2 LINE L1 -248 5914 5650 626 246 5 5 chr2 9017497 9017684 -244238899 - Charlie1 DNA MER1_type 0 2761 2575 629 292 5 10 chr2 9017690 9017907 -244238676 - L1ME2 LINE L1 -567 5599 5405 1808 134 33 24 chr2 9018119 9018448 -244238135 + MER1B DNA MER1_type 8 339 0 318 238 86 29 chr2 9018556 9018661 -244237922 + MIR SINE MIR 107 217 -45 491 206 44 56 chr2 9018665 9018825 -244237758 + L1MC4a LINE L1 5775 5932 -1876 360 0 0 0 chr2 9018847 9018887 -244237696 + (TA)n Simple_repeat Simple_repeat 2 41 0 2104 261 71 50 chr2 9018905 9018963 -244237620 + L1MC4a LINE L1 6104 6159 -1649 180 77 0 0 chr2 9018963 9018989 -244237594 + (TTAAA)n Simple_repeat Simple_repeat 3 28 0 2104 261 71 50 chr2 9018989 9019959 -244236624 + L1MC4a LINE L1 6159 7154 -654 295 276 152 21 chr2 9020035 9020177 -244236406 - MIR SINE MIR -62 146 15 22 0 0 0 chr2 9020816 9020838 -244235745 + AT_rich Low_complexity Low_complexity 1 22 0 2764 142 11 2 chr2 9021036 9021486 -244235097 - L1PA16 LINE L1 -1 6165 5712 2170 93 11 0 chr2 9021957 9022277 -244234306 - AluSg1 SINE Alu 0 323 1 1662 152 74 0 chr2 9022533 9022802 -244233781 - AluJb SINE Alu -23 289 1 322 333 139 6 chr2 9022833 9022998 -244233585 - MIR SINE MIR -38 224 38 208 269 0 0 chr2 9023722 9023774 -244232809 + L2 LINE L2 3262 3313 0 23 33 0 0 chr2 9025359 9025389 -244231194 + AT_rich Low_complexity Low_complexity 1 30 0 1191 222 18 45 chr2 9026813 9027210 -244229373 + L1ME1 LINE L1 5776 6161 -5 26 0 0 0 chr2 9027214 9027240 -244229343 + AT_rich Low_complexity Low_complexity 1 26 0 252 174 29 72 chr2 9027512 9027581 -244229002 - MIR3 SINE MIR -28 180 115 * 770 334 153 14 chr2 9027577 9028459 -244228124 + L2 LINE L2 2170 3179 -134 1623 100 4 8 chr2 9028600 9028841 -244227742 + L1PA8 LINE L1 5931 6170 -2 433 226 0 10 chr2 9028893 9028995 -244227588 + U13 snRNA snRNA 1 101 -3 305 264 94 19 chr2 9029459 9029565 -244227018 + L2 LINE L2 3189 3302 -11 251 294 118 8 chr2 9030354 9030473 -244226110 + MIR SINE MIR 55 186 -76 3496 152 73 6 chr2 9030665 9031354 -244225229 + L1MB8 LINE L1 5442 6176 -2 228 316 0 13 chr2 9031643 9031722 -244224861 + GA-rich Low_complexity Low_complexity 1 78 0 291 346 42 42 chr2 9031952 9032169 -244224414 + MIR SINE MIR 34 250 -12 525 194 0 11 chr2 9032702 9032795 -244223788 - L2 LINE L2 0 3272 3181 723 266 46 8 chr2 9033301 9033542 -244223041 + L1M4 LINE L1 3384 3633 -2513 947 236 98 0 chr2 9033546 9033822 -244222761 + L1MC4 LINE L1 7596 7898 -144 22 56 0 0 chr2 9033855 9033891 -244222692 + AT_rich Low_complexity Low_complexity 1 36 0 1525 148 67 78 chr2 9034027 9034400 -244222183 + L1MB2 LINE L1 5793 6161 -10 919 287 92 47 chr2 9035387 9035878 -244220705 + L2 LINE L2 2228 2740 -574 1825 178 18 50 chr2 9035891 9036292 -244220291 + L1MC3 LINE L1 7138 7525 -260 1805 144 46 7 chr2 9036292 9036576 -244220007 + AluJb SINE Alu 1 295 -17 1825 178 18 50 chr2 9036576 9036618 -244219965 + L1MC3 LINE L1 7525 7567 -218 1376 167 23 87 chr2 9036619 9037011 -244219572 + MLT1A2 LTR MaLR 3 505 0 1020 159 14 14 chr2 9037018 9037238 -244219345 + L1MC3 LINE L1 7566 7785 0 431 188 2 0 chr2 9037369 9037460 -244219123 + L1ME2 LINE L1 6069 6160 -2 352 279 33 25 chr2 9037506 9037628 -244218955 - MLT1G3 LTR MaLR -27 568 446 * 666 258 36 0 chr2 9037606 9037773 -244218810 - MLT1G3 LTR MaLR -187 343 171 307 239 51 17 chr2 9037833 9037950 -244218633 + L1ME4a LINE L1 5994 6114 -7 408 313 96 14 chr2 9039195 9039559 -244217024 - Tigger8 DNA MER2_type -162 504 111 254 374 0 26 chr2 9039727 9039842 -244216741 + L3 LINE CR1 1366 1477 -100 215 239 45 114 chr2 9039954 9040042 -244216541 - MIR SINE MIR -170 92 11 22 0 0 0 chr2 9040331 9040353 -244216230 + AT_rich Low_complexity Low_complexity 1 22 0 364 288 119 31 chr2 9041525 9041685 -244214898 - L3 LINE CR1 -380 1197 1024 400 264 37 62 chr2 9041763 9042005 -244214578 + Charlie8 DNA MER1_type 86 1419 -998 210 326 34 0 chr2 9042122 9042211 -244214372 - L3 LINE CR1 -708 869 778 740 147 0 0 chr2 9042326 9042435 -244214148 - FLAM_C SINE Alu -34 109 1 313 315 91 18 chr2 9043927 9044092 -244212491 - MIR SINE MIR -35 227 51 213 361 102 9 chr2 9044133 9044241 -244212342 - L2 LINE L2 -33 3239 3122 181 368 77 13 chr2 9044762 9044917 -244211666 - L2 LINE L2 -213 3059 2895 307 50 0 0 chr2 9045164 9045204 -244211379 + AluSg/x SINE Alu 218 257 -45 2526 50 0 3 chr2 9045589 9045889 -244210694 - AluY SINE Alu -12 299 1 289 346 0 28 chr2 9046018 9046125 -244210458 - MER5A DNA MER1_type -85 104 1 216 260 0 0 chr2 9046220 9046270 -244210313 - L2 LINE L2 -1444 1870 1821 473 264 129 49 chr2 9046495 9046844 -244209739 + LTR33 LTR ERVL 144 520 -1 477 236 67 61 chr2 9047658 9047823 -244208760 - MIR SINE MIR -52 210 45 208 231 154 0 chr2 9048473 9048538 -244208045 + MIR SINE MIR 123 197 -65 871 168 14 0 chr2 9050555 9050698 -244205885 - Tigger3b DNA MER2_type 0 1232 1088 4126 137 75 41 chr2 9050703 9051549 -244205034 - Tigger3b DNA MER2_type -357 874 1 1704 170 16 31 chr2 9053335 9053652 -244202931 + AluJo SINE Alu 1 312 0 931 102 5 43 chr2 9053653 9053839 -244202744 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 811 131 32 20 chr2 9053825 9054077 -244202506 + GA-rich Low_complexity Low_complexity 1 255 0 * 28 29 0 0 chr2 9054736 9054771 -244201812 + AT_rich Low_complexity Low_complexity 1 35 0 197 315 22 11 chr2 9054936 9055025 -244201558 + L3 LINE CR1 1485 1574 -3 2804 179 54 48 chr2 9055632 9056338 -244200245 - MER67C LTR ERV1 0 710 1 324 218 23 0 chr2 9056692 9056779 -244199804 - HsTC2 DNA Tc2 -2 1896 1808 2400 194 83 19 chr2 9056810 9057936 -244198647 - L1M3c LINE L1 -4805 1336 3 9711 158 76 48 chr2 9058018 9058607 -244197976 - L1MC3 LINE L1 0 7785 7214 280 284 0 0 chr2 9058607 9058688 -244197895 - MLT1F1 LTR MaLR -442 125 45 9711 158 76 48 chr2 9058688 9060247 -244196336 - L1MC3 LINE L1 -571 7214 5496 452 273 124 69 chr2 9060252 9060713 -244195870 - LTR67 LTR ERVL -40 517 32 348 261 50 36 chr2 9060745 9060967 -244195616 + L1ME4a LINE L1 5699 5923 -198 21 0 0 0 chr2 9061098 9061119 -244195464 + AT_rich Low_complexity Low_complexity 1 21 0 1972 149 10 3 chr2 9061128 9061424 -244195159 + AluSx SINE Alu 1 298 -14 868 302 38 44 chr2 9061663 9062136 -244194447 - MLT1J LTR MaLR -9 502 33 586 195 81 0 chr2 9062136 9062259 -244194324 + FLAM_A SINE Alu 1 133 0 644 106 0 10 chr2 9062264 9062368 -244194215 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 273 311 39 19 chr2 9062388 9062491 -244194092 - MER5B DNA MER1_type 0 178 74 1762 145 31 102 chr2 9062903 9063323 -244193260 + MLT1B LTR MaLR 1 390 0 607 202 9 0 chr2 9063444 9063558 -244193025 - MER31B LTR ERV1 -351 115 1 2249 119 7 0 chr2 9064306 9064609 -244191974 - AluSq SINE Alu -8 305 1 352 250 71 120 chr2 9064612 9064796 -244191787 - MER5B DNA MER1_type -3 175 1 456 296 0 0 chr2 9064796 9064904 -244191679 - MIR3 SINE MIR -48 160 53 604 156 266 0 chr2 9065154 9065308 -244191275 + L1PA16 LINE L1 5963 6157 -9 1963 137 50 7 chr2 9065350 9065650 -244190933 + AluSq SINE Alu 1 313 0 2906 160 73 20 chr2 9066370 9066970 -244189613 + MER39 LTR ERV1 76 707 0 2092 116 184 68 chr2 9067045 9067454 -244189129 + LTR54 LTR ERV1 1 470 -40 1648 184 0 49 chr2 9067454 9067758 -244188825 + AluJb SINE Alu 3 291 -21 2092 116 184 68 chr2 9067758 9067805 -244188778 + LTR54 LTR ERV1 470 510 0 1277 157 5 18 chr2 9069330 9069547 -244187036 + AluJo SINE Alu 85 298 -14 2322 99 0 26 chr2 9069627 9069939 -244186644 + AluSc SINE Alu 1 304 -5 2161 123 13 7 chr2 9069998 9070299 -244186284 + AluSx SINE Alu 1 303 -9 435 188 35 0 chr2 9070616 9070701 -244185882 + AluJ/FLAM SINE Alu 2 89 -223 226 252 97 19 chr2 9070702 9070805 -244185778 + MIR3 SINE MIR 98 208 0 313 241 17 129 chr2 9070968 9071025 -244185558 + L3 LINE CR1 1282 1321 -256 1967 147 3 0 chr2 9071025 9071318 -244185265 + AluJb SINE Alu 1 294 -18 313 241 17 129 chr2 9071318 9071376 -244185207 + L3 LINE CR1 1321 1384 -193 599 293 72 14 chr2 9071416 9071638 -244184945 - MIR SINE MIR -26 236 2 238 277 15 0 chr2 9071666 9071731 -244184852 - L1MEc LINE L1 -5026 1370 1305 2648 64 0 0 chr2 9071795 9072106 -244184477 + AluY SINE Alu 1 311 0 559 273 81 48 chr2 9072524 9072856 -244183727 - L1MEc LINE L1 -4939 1266 932 2599 196 12 24 chr2 9072856 9073367 -244183216 - MLT1D LTR MaLR 0 505 1 559 273 81 48 chr2 9073367 9073442 -244183141 - L1MEc LINE L1 -5273 932 861 634 321 46 57 chr2 9073878 9074227 -244182356 - L2 LINE L2 0 3272 2928 1623 142 0 28 chr2 9075926 9076179 -244180404 - AluJb SINE Alu -9 303 58 1909 159 3 3 chr2 9077123 9077424 -244179159 + AluJb SINE Alu 1 301 -11 479 278 44 58 chr2 9078434 9078639 -244177944 - MIR SINE MIR -2 260 59 957 196 111 50 chr2 9078641 9078921 -244177662 - L1ME3A LINE L1 -1 6169 5873 1005 244 130 22 chr2 9078923 9079377 -244177206 - L1ME3A LINE L1 -1155 4991 4489 1702 149 0 0 chr2 9079377 9079632 -244176951 - AluSx SINE Alu -2 310 56 2063 261 91 33 chr2 9079732 9079803 -244176780 - L1ME3A LINE L1 -2576 3570 3505 2255 102 0 0 chr2 9079803 9080113 -244176470 - AluSg SINE Alu 0 310 1 2063 261 91 33 chr2 9080113 9080263 -244176320 - L1ME3A LINE L1 -2641 3505 3365 2606 67 0 6 chr2 9080263 9080576 -244176007 - AluY SINE Alu 0 311 1 2063 261 91 33 chr2 9080576 9080827 -244175756 - L1ME3A LINE L1 -2781 3365 3130 1246 152 46 112 chr2 9080827 9081002 -244175581 - AluSq SINE Alu -9 304 158 207 0 0 0 chr2 9081002 9081025 -244175558 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1246 152 46 112 chr2 9081025 9081172 -244175411 - AluSq SINE Alu -155 158 3 2063 261 91 33 chr2 9081172 9081864 -244174719 - L1ME3A LINE L1 -3016 3130 2336 561 224 19 26 chr2 9081959 9082115 -244174468 - L1M4 LINE L1 -2161 3985 3831 254 272 56 80 chr2 9082118 9082243 -244174340 - L2 LINE L2 0 3272 3151 994 146 19 13 chr2 9082700 9083035 -244173548 + FRAM SINE Alu 1 332 0 205 237 0 0 chr2 9083035 9083073 -244173510 + polypurine Low_complexity Low_complexity 3 40 0 233 374 30 26 chr2 9083154 9083456 -244173127 + L2 LINE L2 2587 2889 -425 2384 93 0 0 chr2 9084227 9084518 -244172065 + AluSx SINE Alu 1 291 -21 189 196 0 0 chr2 9085119 9085165 -244171418 + (CCA)n Simple_repeat Simple_repeat 2 47 0 660 192 0 17 chr2 9087023 9087195 -244169388 + (TG)n Simple_repeat Simple_repeat 2 170 0 245 263 219 53 chr2 9087424 9087538 -244169045 - L2 LINE L2 0 3272 3140 259 324 36 27 chr2 9088752 9088863 -244167720 - MIR SINE MIR -70 192 81 2035 151 20 0 chr2 9089621 9089919 -244166664 + AluJb SINE Alu 2 305 -7 2295 122 0 0 chr2 9090657 9090951 -244165632 + AluSx SINE Alu 1 294 -18 407 247 77 71 chr2 9091325 9091495 -244165088 - MIR SINE MIR -61 201 31 672 325 40 4 chr2 9091750 9092002 -244164581 + MIR SINE MIR 1 261 -1 2116 180 62 5 chr2 9092087 9092520 -244164063 - MER65C LTR ERV1 -2 459 2 2406 96 0 0 chr2 9094091 9094394 -244162189 + AluSx SINE Alu 1 303 -9 414 262 51 98 chr2 9095108 9095322 -244161261 + MIR SINE MIR 3 206 -56 284 235 15 15 chr2 9096098 9096161 -244160422 - MIR SINE MIR -36 226 164 450 289 94 25 chr2 9096161 9096385 -244160198 + MIR SINE MIR 3 239 -23 189 264 125 14 chr2 9096403 9096475 -244160108 - MIR SINE MIR -123 139 60 701 293 173 17 chr2 9098232 9098649 -244157934 + L1ME3A LINE L1 5433 5914 -256 2088 154 0 0 chr2 9098744 9099050 -244157533 + AluJb SINE Alu 1 306 -6 1835 103 107 11 chr2 9100909 9101206 -244155377 + AluSx SINE Alu 2 312 0 579 299 83 25 chr2 9101218 9101459 -244155124 + MIR SINE MIR 8 262 0 389 319 187 20 chr2 9102124 9102722 -244153861 + L2 LINE L2 2034 2731 -583 237 243 0 0 chr2 9102806 9102913 -244153670 + CT-rich Low_complexity Low_complexity 4 110 0 222 273 210 49 chr2 9104139 9104191 -244152392 + MIR SINE MIR 96 138 -124 2268 97 60 31 chr2 9104191 9104543 -244152040 + THE1B LTR MaLR 3 364 0 222 273 210 49 chr2 9104543 9104633 -244151950 + MIR SINE MIR 138 261 -1 1091 203 37 67 chr2 9104706 9104979 -244151604 + L1ME2 LINE L1 5643 5907 -257 1848 184 23 3 chr2 9104979 9105284 -244151299 - AluJb SINE Alu -1 311 1 1091 203 37 67 chr2 9105284 9105357 -244151226 + L1ME2 LINE L1 5907 5981 -183 396 338 29 0 chr2 9105611 9105747 -244150836 - MIR SINE MIR -10 252 113 381 227 58 138 chr2 9106407 9106493 -244150090 - L1ME LINE L1 -429 5692 5601 1952 171 0 0 chr2 9106493 9106798 -244149785 - AluJo SINE Alu -2 310 6 381 227 58 138 chr2 9106798 9106936 -244149647 - L1ME LINE L1 -520 5601 5486 2230 99 0 7 chr2 9107125 9107417 -244149166 - AluY SINE Alu -21 290 1 201 176 0 0 chr2 9107532 9107566 -244149017 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 580 273 64 11 chr2 9107654 9107841 -244148742 - MIR SINE MIR -28 234 38 441 286 67 0 chr2 9107888 9108007 -244148576 + MIR SINE MIR 23 149 -113 2294 105 3 0 chr2 9108196 9108500 -244148083 + AluSq SINE Alu 1 305 -8 2018 137 6 26 chr2 9109021 9109334 -244147249 - AluJo SINE Alu -5 307 1 353 203 0 14 chr2 9109892 9109961 -244146622 + MIR3 SINE MIR 89 156 -52 1698 228 13 51 chr2 9110300 9110808 -244145775 - L1PA16 LINE L1 -1 6165 5706 2145 147 0 3 chr2 9110825 9111132 -244145451 + AluSx SINE Alu 1 306 -6 515 242 204 8 chr2 9111293 9111533 -244145050 - L1ME3A LINE L1 -219 5951 5665 1898 185 0 0 chr2 9112861 9113163 -244143420 + AluJb SINE Alu 6 307 -5 2295 100 0 38 chr2 9113218 9113538 -244143045 + AluSq SINE Alu 1 308 -5 189 74 0 0 chr2 9113564 9113591 -244142992 + (CA)n Simple_repeat Simple_repeat 2 28 0 1121 158 30 0 chr2 9113929 9114132 -244142451 + MER2 DNA MER2_type 3 211 -134 1792 141 11 0 chr2 9114142 9114405 -244142178 - AluJb SINE Alu -5 307 42 186 43 0 0 chr2 9115198 9115221 -244141362 + (A)n Simple_repeat Simple_repeat 1 23 0 284 152 0 0 chr2 9115242 9115288 -244141295 - L2 LINE L2 0 3313 3268 214 278 178 0 chr2 9116151 9116241 -244140342 - L2 LINE L2 -1 3312 3207 2076 128 0 16 chr2 9116554 9116859 -244139724 - AluSx SINE Alu -12 300 1 28 0 0 0 chr2 9117216 9117244 -244139339 + AT_rich Low_complexity Low_complexity 1 28 0 783 133 0 0 chr2 9117244 9117349 -244139234 - FLAM_C SINE Alu -25 118 14 1297 266 64 21 chr2 9117371 9117807 -244138776 - MLT1F LTR MaLR 0 542 88 1062 182 9 78 chr2 9117807 9118038 -244138545 - AluJo SINE Alu -22 290 76 1930 203 19 7 chr2 9118048 9118467 -244138116 - L1MB4 LINE L1 -4 6176 5753 245 293 0 40 chr2 9118468 9118567 -244138016 - MLT1F LTR MaLR -444 98 4 237 337 105 0 chr2 9118595 9118690 -244137893 + L2 LINE L2 3186 3290 -23 286 197 15 45 chr2 9118852 9118918 -244137665 - MIR3 SINE MIR -18 190 127 547 218 0 8 chr2 9118928 9119052 -244137531 - MLT1C LTR MaLR -8 459 337 942 194 90 18 chr2 9119078 9119376 -244137207 - MLT1C LTR MaLR -155 412 85 257 204 0 0 chr2 9119393 9119447 -244137136 - AluJ/monomer SINE Alu 0 302 249 204 313 109 0 chr2 9120028 9120156 -244136427 - L2 LINE L2 -274 2998 2857 889 214 92 56 chr2 9120742 9121101 -244135482 - L1MD2 LINE L1 -1 6358 5987 180 0 0 0 chr2 9121109 9121129 -244135454 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 401 24 0 176 chr2 9121129 9121167 -244135416 - MER41A LTR ERV1 -89 465 448 2220 94 37 13 chr2 9121167 9121466 -244135117 + AluSx SINE Alu 3 308 -4 401 24 0 176 chr2 9121466 9121507 -244135076 - MER41A LTR ERV1 -106 448 401 2089 206 20 15 chr2 9121512 9121969 -244134614 - L1MD2 LINE L1 -465 5894 5436 28 0 0 0 chr2 9123981 9124009 -244132574 + GC_rich Low_complexity Low_complexity 1 28 0 245 197 15 15 chr2 9124490 9124556 -244132027 + (CCG)n Simple_repeat Simple_repeat 3 68 0 30 97 0 0 chr2 9124578 9124671 -244131912 + GC_rich Low_complexity Low_complexity 1 93 0 183 108 216 0 chr2 9124914 9124951 -244131632 + MIR SINE MIR 210 254 -8 856 115 122 22 chr2 9125098 9125237 -244131346 - AluJb SINE Alu -159 153 1 3289 200 33 26 chr2 9125551 9126148 -244130435 + MER44D DNA MER2_type 1 477 -2010 1927 153 27 0 chr2 9126148 9126448 -244130135 + AluJb SINE Alu 1 308 -4 3289 200 33 26 chr2 9126448 9126570 -244130013 + MER44D DNA MER2_type 477 597 -8 981 192 52 5 chr2 9126769 9126962 -244129621 + AluJb SINE Alu 96 297 -15 247 240 93 0 chr2 9127112 9127187 -244129396 + MIR SINE MIR 113 194 -68 586 259 58 0 chr2 9127479 9127653 -244128930 + L1M4 LINE L1 3850 4033 -2113 898 82 0 0 chr2 9127903 9128013 -244128570 + AluSg/x SINE Alu 195 304 -5 2125 125 0 3 chr2 9128022 9128310 -244128273 + AluSx SINE Alu 1 287 -25 546 288 55 20 chr2 9128456 9128794 -244127789 - L1MC/D LINE L1 -476 5645 5293 320 311 29 10 chr2 9128840 9128943 -244127640 - L1MC/D LINE L1 -1082 5064 4960 277 282 42 6 chr2 9129082 9129246 -244127337 + LTR16C LTR ERVL 271 407 -50 2331 97 7 3 chr2 9129248 9129557 -244127026 + AluSg SINE Alu 1 310 0 426 315 70 38 chr2 9130090 9130139 -244126444 - L1ME4a LINE L1 -206 5915 5869 2159 97 34 27 chr2 9130139 9130437 -244126146 + AluSq SINE Alu 1 300 -13 426 315 70 38 chr2 9130437 9130600 -244125983 - L1ME4a LINE L1 -252 5869 5696 343 108 15 62 chr2 9130626 9130691 -244125892 + MSTC LTR MaLR 1 62 -366 * 418 121 0 0 chr2 9130672 9130738 -244125845 + MSTC LTR MaLR 297 362 -66 2510 80 0 0 chr2 9130739 9131039 -244125544 + AluY SINE Alu 1 300 -11 2744 26 0 3 chr2 9131575 9131880 -244124703 + AluY SINE Alu 1 304 -7 2259 89 43 6 chr2 9131883 9132233 -244124350 + L1MA3 LINE L1 5943 6305 0 236 204 204 19 chr2 9132853 9132961 -244123622 - MER3 DNA MER1_type 0 209 82 883 149 105 88 chr2 9133256 9133551 -244123032 + MER58D DNA MER1_type 4 303 -83 195 42 0 0 chr2 9133679 9133703 -244122880 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2578 47 3 3 chr2 9133926 9134227 -244122356 - AluY SINE Alu -10 301 1 1793 146 30 4 chr2 9134295 9134562 -244122021 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 9134904 9134926 -244121657 + AT_rich Low_complexity Low_complexity 1 22 0 211 305 211 21 chr2 9136628 9136723 -244119860 - L2 LINE L2 -5 3267 3155 288 253 64 56 chr2 9136726 9136895 -244119688 - MIR SINE MIR -62 146 19 241 309 44 69 chr2 9137662 9137866 -244118717 + MIR3 SINE MIR 10 208 0 268 270 63 56 chr2 9138287 9138413 -244118170 - MIR3 SINE MIR -67 141 15 328 305 250 6 chr2 9139210 9139374 -244117209 - MIR SINE MIR -12 250 47 1591 192 24 3 chr2 9139811 9140102 -244116481 + AluJo SINE Alu 1 297 -15 1697 145 54 30 chr2 9140362 9140659 -244115924 + AluJb SINE Alu 1 304 -8 183 320 77 13 chr2 9140804 9140882 -244115701 - MIR SINE MIR -95 113 31 464 246 39 52 chr2 9141051 9141236 -244115347 - L2 LINE L2 -12 3301 3073 231 236 14 42 chr2 9141848 9141920 -244114663 - MIR SINE MIR -102 106 37 1634 173 30 23 chr2 9142629 9142929 -244113654 - AluSg SINE Alu -8 302 1 2503 53 0 0 chr2 9143539 9143847 -244112736 + AluY SINE Alu 1 308 0 271 246 16 0 chr2 9144584 9144645 -244111938 - L2 LINE L2 -3 3269 3208 364 271 27 38 chr2 9144846 9144979 -244111604 - MIR SINE MIR -59 149 50 1887 113 8 0 chr2 9145278 9145535 -244111048 - AluSx SINE Alu -53 259 1 466 272 63 19 chr2 9145650 9145808 -244110775 - MLT1J2 LTR MaLR -284 166 2 545 247 97 53 chr2 9145808 9146035 -244110548 + L2 LINE L2 3045 3281 -32 183 80 0 0 chr2 9146373 9146398 -244110185 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 22 88 0 0 chr2 9146545 9146602 -244109981 + AT_rich Low_complexity Low_complexity 1 57 0 313 242 57 117 chr2 9146610 9146706 -244109877 + L1MC5 LINE L1 7688 7788 -173 2067 120 0 46 chr2 9146706 9146997 -244109586 + AluSq SINE Alu 5 281 -32 231 36 0 0 chr2 9146997 9147025 -244109558 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2067 120 0 46 chr2 9147025 9147057 -244109526 + AluSq SINE Alu 281 313 0 313 242 57 117 chr2 9147057 9147224 -244109359 + L1MC5 LINE L1 7788 7935 -26 372 343 12 58 chr2 9147550 9147666 -244108917 - MIR3 SINE MIR -14 194 87 2277 115 3 10 chr2 9147666 9147978 -244108605 + AluSx SINE Alu 1 310 -2 372 343 12 58 chr2 9147978 9148033 -244108550 - MIR3 SINE MIR -121 87 31 1895 150 20 3 chr2 9148395 9148689 -244107894 - AluJb SINE Alu -13 299 1 442 316 102 45 chr2 9148707 9148951 -244107632 - MIR SINE MIR -4 258 1 213 108 0 0 chr2 9149456 9149493 -244107090 + (CA)n Simple_repeat Simple_repeat 1 37 0 2098 205 75 0 chr2 9149627 9150110 -244106473 + L1MB7 LINE L1 5657 6175 -9 341 253 175 32 chr2 9150331 9150485 -244106098 + MIR SINE MIR 27 202 -60 512 247 26 74 chr2 9150880 9151070 -244105513 - MIR SINE MIR -76 186 6 707 206 65 35 chr2 9151174 9151344 -244105239 - MER45A DNA AcHobo 0 178 4 522 103 0 23 chr2 9152008 9152095 -244104488 + MLT1C LTR MaLR 3 87 -380 295 137 0 0 chr2 9152308 9152359 -244104224 + Alu SINE Alu 246 296 -5 286 279 51 0 chr2 9154240 9154319 -244102264 - MIR SINE MIR -84 178 96 275 293 49 24 chr2 9155459 9155582 -244101001 + MIR SINE MIR 86 211 -51 822 133 0 8 chr2 9156126 9156246 -244100337 - FLAM_A SINE Alu -12 121 3 546 237 201 16 chr2 9156488 9156682 -244099901 - MIR SINE MIR -5 257 28 1868 175 3 0 chr2 9158009 9158324 -244098259 + AluSx SINE Alu 1 316 0 2363 98 0 0 chr2 9159117 9159413 -244097170 + AluSc SINE Alu 1 296 -13 633 275 55 22 chr2 9159479 9159661 -244096922 - MIR SINE MIR -1 261 74 355 267 48 0 chr2 9160522 9160627 -244095956 + MIR SINE MIR 56 165 -97 412 259 6 6 chr2 9161112 9161238 -244095345 - MIR SINE MIR -66 142 46 479 241 99 0 chr2 9161914 9162055 -244094528 + MLT1F1 LTR MaLR 411 565 -2 2366 94 0 3 chr2 9162210 9162508 -244094075 + AluSx SINE Alu 1 297 -15 2233 107 23 3 chr2 9163281 9163580 -244093003 + AluSp SINE Alu 1 305 -8 261 83 0 0 chr2 9163580 9163616 -244092967 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 690 253 116 58 chr2 9164786 9165236 -244091347 + MLT1J LTR MaLR 28 503 -8 387 329 36 7 chr2 9165289 9165426 -244091157 - MIR3 SINE MIR -10 198 58 460 230 112 37 chr2 9165438 9165478 -244091105 + LTR33 LTR ERVL 16 52 -469 2046 109 31 7 chr2 9165478 9165771 -244090812 - AluSg1 SINE Alu -9 300 1 460 230 112 37 chr2 9165771 9165891 -244090692 + LTR33 LTR ERVL 52 188 -333 518 191 118 7 chr2 9166642 9166778 -244089805 - MER63 DNA MER1_type -53 783 7 217 333 53 0 chr2 9166846 9166921 -244089662 - MER5A DNA MER1_type -1 188 110 614 215 0 6 chr2 9167179 9167351 -244089232 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 1023 81 0 0 chr2 9167466 9167590 -244088993 + AluSg/x SINE Alu 182 305 -7 322 218 24 135 chr2 9167773 9167943 -244088640 + LTR67 LTR ERVL 5 155 -402 462 246 42 7 chr2 9168103 9168245 -244088338 + LTR67 LTR ERVL 386 532 -25 2284 108 0 10 chr2 9168423 9168728 -244087855 + AluSg SINE Alu 3 304 -6 330 286 40 32 chr2 9168741 9168867 -244087716 - MER5A DNA MER1_type -19 170 44 329 234 175 44 chr2 9168745 9168882 -244087701 + MER5A DNA MER1_type 35 189 0 * 275 199 109 33 chr2 9169224 9169355 -244087228 - LTR33A LTR ERVL -287 234 69 227 306 122 0 chr2 9169474 9169572 -244087011 - MIR SINE MIR -69 139 30 412 230 11 46 chr2 9170002 9170089 -244086494 - MIR3 SINE MIR -54 154 71 598 111 0 0 chr2 9170423 9170513 -244086070 - MER41B LTR ERV1 0 635 546 4603 91 11 20 chr2 9171592 9172233 -244084350 - MER41B LTR ERV1 0 635 1 303 225 42 0 chr2 9172392 9172463 -244084120 + MER105 DNA DNA 1 74 -130 257 246 48 16 chr2 9172488 9172614 -244083969 + (CATA)n Simple_repeat Simple_repeat 2 131 0 680 269 52 70 chr2 9172617 9172955 -244083628 - LTR16A LTR ERVL -48 402 70 3266 160 17 91 chr2 9172955 9173700 -244082883 + LTR8 LTR ERV1 1 690 -1 680 269 52 70 chr2 9173700 9173748 -244082835 - LTR16A LTR ERVL -380 70 23 2444 193 77 50 chr2 9173771 9174130 -244082453 + L1ME1 LINE L1 4614 4962 -1184 748 157 0 25 chr2 9174130 9174275 -244082308 - FLAM_C SINE Alu 0 142 1 2444 193 77 50 chr2 9174275 9174675 -244081908 + L1ME1 LINE L1 4962 5396 -750 1712 199 10 16 chr2 9174669 9175055 -244081528 + L1ME1 LINE L1 5615 5998 -168 * 2172 130 0 3 chr2 9175168 9175469 -244081114 + AluSx SINE Alu 1 300 -12 2308 91 10 7 chr2 9175469 9175776 -244080807 + AluSg1 SINE Alu 1 308 -1 1639 188 57 39 chr2 9175930 9176313 -244080270 - MLT1B LTR MaLR 0 390 1 236 245 19 19 chr2 9176355 9176408 -244080175 + MIR SINE MIR 23 75 -133 341 229 73 68 chr2 9176443 9176635 -244079948 + MER117 DNA MER1_type 2 194 -3 2149 129 0 10 chr2 9176882 9177185 -244079398 + AluSx SINE Alu 1 300 -12 342 234 53 0 chr2 9177253 9177347 -244079236 - MER20 DNA MER1_type -57 162 64 400 173 146 45 chr2 9177708 9177818 -244078765 + MIR SINE MIR 29 149 -113 288 212 8 127 chr2 9177823 9177892 -244078691 + MLT1J LTR MaLR 1 53 -458 1924 156 0 0 chr2 9177892 9178222 -244078361 - AluSx SINE Alu 0 330 1 288 212 8 127 chr2 9178222 9178269 -244078314 + MLT1J LTR MaLR 53 104 -407 536 254 110 76 chr2 9178283 9178574 -244078009 + MLT1J LTR MaLR 205 505 -6 23 0 0 0 chr2 9178714 9178737 -244077846 + AT_rich Low_complexity Low_complexity 1 23 0 185 288 125 0 chr2 9179081 9179161 -244077422 - MIR SINE MIR -52 210 121 534 305 6 0 chr2 9179296 9179463 -244077120 - MER119 DNA MER1_type -290 293 126 23 33 0 0 chr2 9179570 9179600 -244076983 + AT_rich Low_complexity Low_complexity 1 30 0 676 152 27 18 chr2 9179600 9179712 -244076871 - FLAM_A SINE Alu -18 124 12 313 247 25 0 chr2 9179721 9179802 -244076781 - MER119 DNA MER1_type -496 87 5 2303 105 0 3 chr2 9180045 9180350 -244076233 - AluSq SINE Alu -9 304 1 524 216 0 8 chr2 9180422 9180556 -244076027 + (TG)n Simple_repeat Simple_repeat 2 134 0 1004 187 44 4 chr2 9180700 9180951 -244075632 + L1 LINE L1 4247 4507 -1639 422 314 24 8 chr2 9181029 9181153 -244075430 + HAL1 LINE L1 1255 1380 -1127 2201 126 0 3 chr2 9181158 9181459 -244075124 + AluSx SINE Alu 3 302 -10 427 169 79 11 chr2 9181562 9181651 -244074932 - LTR54 LTR ERV1 -373 137 43 341 163 174 0 chr2 9181652 9181744 -244074839 + HAL1 LINE L1 2097 2204 -303 472 214 0 0 chr2 9181763 9181852 -244074731 - LTR49 LTR ERV1 0 595 507 534 138 0 0 chr2 9181862 9181942 -244074641 + FLAM SINE Alu 42 121 -22 2106 121 29 10 chr2 9181966 9182272 -244074311 - AluSx SINE Alu 0 312 1 708 264 110 35 chr2 9182315 9182422 -244074161 - LTR48B LTR ERV1 -150 494 397 3500 128 56 0 chr2 9182422 9182921 -244073662 - MER1A DNA MER1_type 0 527 1 708 264 110 35 chr2 9182921 9183131 -244073452 - LTR48B LTR ERV1 -247 397 153 4550 57 37 11 chr2 9183131 9184147 -244072436 - MER11A LTR ERVK 0 1266 1 443 75 0 50 chr2 9184147 9184226 -244072357 - LTR48B LTR ERV1 -486 158 84 365 226 34 124 chr2 9184385 9184477 -244072106 + HAL1 LINE L1 2260 2359 -148 2063 155 0 0 chr2 9184477 9184767 -244071816 + AluJb SINE Alu 1 290 -22 365 226 34 124 chr2 9184767 9184940 -244071643 + HAL1 LINE L1 2359 2501 -6 2246 131 3 0 chr2 9185001 9185306 -244071277 + AluSx SINE Alu 1 306 -6 1093 261 65 21 chr2 9185446 9185771 -244070812 + MER58B DNA MER1_type 1 339 -2 463 325 33 0 chr2 9185804 9185955 -244070628 + MIR SINE MIR 51 206 -56 2527 80 0 0 chr2 9186306 9186608 -244069975 + AluSq SINE Alu 1 302 -11 242 254 58 56 chr2 9187352 9187524 -244069059 - MIR SINE MIR -62 146 17 354 23 0 0 chr2 9188131 9188174 -244068409 + (CA)n Simple_repeat Simple_repeat 2 44 0 423 279 11 49 chr2 9189235 9189418 -244067165 + (TATG)n Simple_repeat Simple_repeat 3 178 0 2127 135 7 0 chr2 9190040 9190344 -244066239 + AluSx SINE Alu 1 306 -6 709 265 109 73 chr2 9190380 9190821 -244065762 + L1MC4 LINE L1 7444 7900 -142 534 295 51 6 chr2 9191157 9191313 -244065270 + MIR SINE MIR 26 188 -74 300 239 0 28 chr2 9191376 9191458 -244065125 - MER5A DNA MER1_type -23 166 76 426 311 48 6 chr2 9191488 9191655 -244064928 + L2 LINE L2 2881 3054 -218 389 266 42 63 chr2 9191793 9191936 -244064647 - MIR SINE MIR -102 160 21 2348 93 7 3 chr2 9192023 9192325 -244064258 - AluSx SINE Alu -9 303 1 198 283 19 0 chr2 9193410 9193463 -244063120 + L2 LINE L2 2156 2209 -1105 2414 86 0 16 chr2 9193486 9193800 -244062783 + AluSx SINE Alu 1 309 -3 509 21 62 10 chr2 9193883 9193979 -244062604 + (CA)n Simple_repeat Simple_repeat 1 101 0 3857 96 26 100 chr2 9193979 9194696 -244061887 - MER4A LTR ERV1 0 664 1 240 35 0 0 chr2 9194696 9194725 -244061858 + (CA)n Simple_repeat Simple_repeat 2 30 0 330 313 104 21 chr2 9194971 9195115 -244061468 + MIR SINE MIR 22 177 -85 592 254 53 30 chr2 9195236 9195405 -244061178 + MIR SINE MIR 68 240 -22 183 300 169 53 chr2 9196064 9196401 -244060182 + L2 LINE L2 2213 2588 -726 238 191 0 0 chr2 9196439 9196486 -244060097 + MER58B DNA MER1_type 295 341 0 245 303 134 39 chr2 9196917 9197224 -244059359 - L1ME3A LINE L1 -223 5947 5612 255 247 92 53 chr2 9197310 9197472 -244059111 - L1ME3A LINE L1 -704 5452 5319 277 171 43 29 chr2 9197572 9197642 -244058941 - Charlie4 DNA MER1_type -1879 82 12 27 29 0 0 chr2 9197713 9197747 -244058836 + AT_rich Low_complexity Low_complexity 1 34 0 2043 103 19 39 chr2 9198283 9198454 -244058129 - AluJb SINE Alu -8 304 140 2386 108 0 0 chr2 9198454 9198761 -244057822 - AluSx SINE Alu -5 307 1 2043 103 19 39 chr2 9198761 9198899 -244057684 - AluJb SINE Alu -172 140 1 399 278 202 15 chr2 9198914 9199112 -244057471 - MIR SINE MIR -8 254 20 2468 75 0 3 chr2 9199608 9199914 -244056669 - AluY SINE Alu -6 305 1 201 264 99 11 chr2 9199961 9200052 -244056531 - MIR SINE MIR -12 250 152 358 202 58 18 chr2 9200618 9200746 -244055837 + MIR3 SINE MIR 60 196 -12 360 296 139 12 chr2 9201320 9201492 -244055091 + MIR3 SINE MIR 15 208 0 4596 173 54 22 chr2 9201710 9203310 -244053273 - L1MB7 LINE L1 -25 6159 4503 659 143 0 0 chr2 9203310 9203415 -244053168 - AluSg/x SINE Alu 0 312 208 280 156 0 6 chr2 9203415 9203474 -244053109 - Alu SINE Alu -268 40 1 1227 218 29 35 chr2 9203474 9203788 -244052795 - L1MB7 LINE L1 -1664 4482 4169 2292 48 44 24 chr2 9203788 9204082 -244052501 - AluY SINE Alu -5 306 7 1227 218 29 35 chr2 9204082 9204111 -244052472 - L1MB7 LINE L1 -1977 4169 4141 217 306 148 0 chr2 9206323 9206431 -244050152 + L2 LINE L2 3142 3265 -7 239 204 41 0 chr2 9206759 9206808 -244049775 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 544 191 89 64 chr2 9207071 9207228 -244049355 + MER58C DNA MER1_type 43 203 -12 221 250 0 0 chr2 9208486 9208530 -244048053 + L3 LINE CR1 1532 1575 -2 218 308 63 25 chr2 9209544 9209677 -244046906 - MIR SINE MIR -65 143 18 502 326 39 11 chr2 9214527 9214705 -244041878 + L2 LINE L2 3130 3312 -1 309 283 18 53 chr2 9215585 9215698 -244040885 + MIR SINE MIR 12 120 -142 * 672 216 88 66 chr2 9215697 9215830 -244040753 - MIR SINE MIR -5 257 115 2460 96 0 0 chr2 9215830 9216133 -244040450 + AluSx SINE Alu 1 303 -9 672 216 88 66 chr2 9216133 9216226 -244040357 - MIR SINE MIR -147 115 26 276 322 67 31 chr2 9216174 9216398 -244040185 + MIR SINE MIR 7 242 -20 * 715 231 15 5 chr2 9217898 9218097 -244038486 + MER20 DNA MER1_type 19 219 0 21 0 0 0 chr2 9218628 9218649 -244037934 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 0 0 chr2 9218667 9218705 -244037878 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1641 146 4 4 chr2 9219321 9219575 -244037008 + AluJo SINE Alu 1 254 -58 216 359 35 78 chr2 9219644 9219725 -244036858 - L2 LINE L2 -538 2776 2693 2413 90 3 13 chr2 9219725 9220037 -244036546 + AluSg SINE Alu 1 309 -1 216 359 35 78 chr2 9220037 9220186 -244036397 - L2 LINE L2 -621 2693 2556 1229 160 9 5 chr2 9220221 9220433 -244036150 - MER4E LTR ERV1 0 779 567 * 1718 141 63 30 chr2 9220427 9220760 -244035823 - MER4B LTR ERV1 -266 344 1 268 158 368 11 chr2 9220765 9220860 -244035723 - MIR SINE MIR -66 196 68 529 193 28 0 chr2 9221892 9222001 -244034582 - MIR SINE MIR -129 133 22 2166 123 41 0 chr2 9223122 9223464 -244033119 + THE1B LTR MaLR 2 357 -7 264 273 10 30 chr2 9223529 9223628 -244032955 + MLT1K LTR MaLR 492 588 0 241 263 14 111 chr2 9224358 9224415 -244032168 + MIR SINE MIR 11 56 -152 1676 192 0 10 chr2 9224415 9224723 -244031860 - AluJo SINE Alu -7 305 1 241 263 14 111 chr2 9224723 9224786 -244031797 + MIR SINE MIR 56 124 -84 872 159 0 0 chr2 9224953 9225085 -244031498 + AluJo SINE Alu 2 133 -169 2392 89 86 9 chr2 9225099 9225437 -244031146 + THE1B LTR MaLR 1 364 0 858 160 0 75 chr2 9225439 9225585 -244030998 + AluJo SINE Alu 140 261 -174 1079 73 11 17 chr2 9225585 9225763 -244030820 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 858 160 0 75 chr2 9225763 9225926 -244030657 + AluJo SINE Alu 261 435 0 255 266 152 0 chr2 9227169 9227248 -244029335 + MIR SINE MIR 57 147 -61 2043 139 3 19 chr2 9227267 9227577 -244029006 + AluSx SINE Alu 1 305 -7 194 244 24 0 chr2 9227586 9227627 -244028956 + MIR SINE MIR 218 259 -3 2313 71 3 3 chr2 9228181 9228496 -244028087 + AluY SINE Alu 1 315 0 1935 146 3 54 chr2 9228503 9228819 -244027764 + AluSx SINE Alu 1 300 -12 2382 105 0 3 chr2 9229063 9229376 -244027207 + AluSx SINE Alu 1 312 0 1576 175 91 4 chr2 9229432 9229706 -244026877 + AluJb SINE Alu 1 298 -14 190 333 63 16 chr2 9230479 9230605 -244025978 + MIR SINE MIR 120 251 -11 242 71 0 24 chr2 9230607 9230649 -244025934 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 459 258 42 72 chr2 9230957 9231124 -244025459 - MER91B DNA MER1_type -11 179 18 1886 158 14 0 chr2 9231169 9231461 -244025122 + AluJo SINE Alu 1 296 -16 436 296 206 7 chr2 9232009 9232310 -244024273 + L2 LINE L2 2912 3272 0 459 316 56 71 chr2 9232392 9232785 -244023798 - L2 LINE L2 -508 2806 2420 2462 73 3 0 chr2 9234141 9234441 -244022142 - AluY SINE Alu -10 301 1 2103 137 20 7 chr2 9234449 9234749 -244021834 - AluJb SINE Alu -8 304 1 206 265 20 0 chr2 9235544 9235593 -244020990 + L2 LINE L2 3194 3243 -29 639 39 0 0 chr2 9235975 9236053 -244020530 + (TC)n Simple_repeat Simple_repeat 1 78 0 4946 108 3 3 chr2 9236304 9236991 -244019592 - L1PA10 LINE L1 -1 6167 5481 2150 128 10 6 chr2 9236991 9237303 -244019280 - AluSp SINE Alu 0 313 1 2091 131 3 10 chr2 9237391 9237697 -244018886 - AluSq SINE Alu -7 306 3 245 285 61 144 chr2 9237741 9238004 -244018579 - MIR SINE MIR -2 260 20 1746 157 51 40 chr2 9238074 9238133 -244018450 - L1MB8 LINE L1 -9 6169 6112 1671 194 3 7 chr2 9238133 9238443 -244018140 + AluJo SINE Alu 1 309 -3 1746 157 51 40 chr2 9238443 9238758 -244017825 - L1MB8 LINE L1 -66 6112 5791 2366 169 38 0 chr2 9238759 9239202 -244017381 + MLT1C LTR MaLR 3 462 -5 2719 149 45 79 chr2 9239202 9239517 -244017066 - L1MB8 LINE L1 -401 5783 5459 2287 117 42 28 chr2 9239517 9239728 -244016855 - THE1B LTR MaLR 0 364 144 2008 140 0 13 chr2 9239728 9240036 -244016547 + AluSc SINE Alu 1 304 -5 2287 117 42 28 chr2 9240036 9240183 -244016400 - THE1B LTR MaLR -220 144 1 2719 149 45 79 chr2 9240183 9240423 -244016160 - L1MB8 LINE L1 -725 5459 5262 2275 114 0 16 chr2 9240423 9240740 -244015843 + AluJb SINE Alu 1 312 0 2719 149 45 79 chr2 9240740 9240869 -244015714 - L1MB8 LINE L1 -922 5262 5130 282 300 9 55 chr2 9240896 9241006 -244015577 + L2 LINE L2 2642 2746 -568 583 86 43 0 chr2 9241006 9241138 -244015445 + AluJb SINE Alu 189 324 0 998 284 81 45 chr2 9241170 9241653 -244014930 + L2 LINE L2 2812 3311 -2 449 267 240 0 chr2 9241859 9242005 -244014578 - MER5A DNA MER1_type 0 189 9 329 266 55 37 chr2 9242351 9242460 -244014123 - L2 LINE L2 -4 3309 3199 253 379 121 0 chr2 9242784 9242966 -244013617 - L2 LINE L2 -179 3093 2890 1276 204 96 16 chr2 9243076 9243390 -244013193 - MER58B DNA MER1_type -2 339 1 2460 177 33 124 chr2 9243952 9244285 -244012298 + MER63C DNA MER1_type 1 226 -834 2884 13 3 0 chr2 9244285 9244598 -244011985 + AluYb8 SINE Alu 1 314 -4 2460 177 33 124 chr2 9244598 9245027 -244011556 + MER63C DNA MER1_type 226 693 -237 319 256 13 0 chr2 9245033 9245111 -244011472 + MER63C DNA MER1_type 854 932 0 192 333 0 0 chr2 9245444 9245501 -244011082 - MIR3 SINE MIR -15 193 137 2628 58 0 0 chr2 9245512 9245822 -244010761 - AluY SINE Alu -1 310 1 228 107 18 36 chr2 9246378 9246434 -244010149 + (TTCTCC)n Simple_repeat Simple_repeat 5 59 0 21 0 0 0 chr2 9246434 9246455 -244010128 + AT_rich Low_complexity Low_complexity 1 21 0 1048 219 102 29 chr2 9246455 9246770 -244009813 - MER46C DNA MER2_type 0 338 1 212 245 0 0 chr2 9248038 9248087 -244008496 + CT-rich Low_complexity Low_complexity 3 51 0 208 304 52 61 chr2 9248232 9248347 -244008236 + MIR SINE MIR 23 136 -126 25 75 0 0 chr2 9248634 9248687 -244007896 + GC_rich Low_complexity Low_complexity 1 53 0 1630 77 5 0 chr2 9248843 9249038 -244007545 + AluSp SINE Alu 104 299 -14 214 200 0 0 chr2 9249236 9249276 -244007307 + T-rich Low_complexity Low_complexity 1 40 0 254 382 49 16 chr2 9250007 9250130 -244006453 - L2 LINE L2 -21 3251 3125 201 254 127 0 chr2 9250432 9250487 -244006096 + L2 LINE L2 2433 2494 -820 384 130 101 0 chr2 9250566 9250635 -244005948 - Charlie5 DNA MER1_type -2527 85 10 269 180 20 0 chr2 9250656 9250706 -244005877 + MER5A DNA MER1_type 42 92 -97 449 265 119 13 chr2 9250772 9250923 -244005660 - MER5B DNA MER1_type -11 167 1 * 1087 263 95 39 chr2 9250923 9251555 -244005028 - L2 LINE L2 -141 3172 2496 2309 108 0 6 chr2 9252092 9252406 -244004177 - AluSx SINE Alu 0 312 1 187 351 52 0 chr2 9252550 9252627 -244003956 - L2 LINE L2 -1 3312 3232 189 0 0 0 chr2 9252644 9252665 -244003918 + (A)n Simple_repeat Simple_repeat 1 21 0 686 202 74 15 chr2 9252738 9252852 -244003731 - Charlie4 DNA MER1_type -7 1954 1848 1427 166 109 22 chr2 9252852 9253172 -244003411 - MER7A DNA MER2_type 0 346 1 686 202 74 15 chr2 9253172 9253260 -244003323 - Charlie4 DNA MER1_type -113 1848 1740 1007 180 131 37 chr2 9354301 9354545 -243902038 + AluJo SINE Alu 1 267 -45 414 0 0 0 chr2 9354577 9354623 -243901960 + (CA)n Simple_repeat Simple_repeat 1 46 0 1714 154 0 34 chr2 9355164 9355462 -243901121 - AluJo SINE Alu -24 288 1 2078 120 0 3 chr2 9355566 9355866 -243900717 - AluSq SINE Alu -14 299 1 231 190 139 63 chr2 9355917 9355996 -243900587 + MIR3 SINE MIR 102 186 -22 1749 113 68 0 chr2 9356775 9357040 -243899543 - AluSx SINE Alu -29 283 1 968 276 79 3 chr2 9357042 9357411 -243899172 - L1ME1 LINE L1 -220 5946 5550 223 293 150 30 chr2 9358490 9358623 -243897960 + MIR SINE MIR 71 219 -43 887 158 22 27 chr2 9358972 9359155 -243897428 + AluJo SINE Alu 107 288 -24 559 283 53 0 chr2 9359755 9359907 -243896676 + MIR SINE MIR 19 178 -84 2131 94 13 3 chr2 9360086 9360385 -243896198 + AluSx SINE Alu 3 304 -8 689 217 0 8 chr2 9360418 9360547 -243896036 - MER8 DNA MER2_type 0 239 112 540 275 111 19 chr2 9361414 9361621 -243894962 + MIR SINE MIR 20 245 -17 521 264 67 39 chr2 9361689 9361910 -243894673 - L1ME4a LINE L1 -18 6103 5871 1242 164 114 8 chr2 9361910 9362172 -243894411 - AluJo SINE Alu -22 290 1 521 264 67 39 chr2 9362172 9362234 -243894349 - L1ME4a LINE L1 -250 5871 5812 2174 104 16 0 chr2 9362306 9362614 -243893969 + AluSq SINE Alu 1 313 0 236 295 139 29 chr2 9362810 9363091 -243893492 - L1ME4a LINE L1 -528 5593 5282 239 250 198 10 chr2 9364855 9364951 -243891632 + MIR SINE MIR 37 150 -112 289 80 40 40 chr2 9365039 9365089 -243891494 + L1MC5 LINE L1 7740 7789 -172 830 186 11 17 chr2 9365475 9365607 -243890976 + AluJb SINE Alu 137 269 -43 1782 170 70 23 chr2 9365607 9366037 -243890546 + LTR7 LTR ERV1 1 450 0 830 186 11 17 chr2 9366037 9366081 -243890502 + AluJb SINE Alu 269 312 0 2196 96 0 3 chr2 9366740 9367033 -243889550 + AluSx SINE Alu 21 312 0 282 270 33 53 chr2 9367548 9367700 -243888883 + MER5B DNA MER1_type 30 178 0 929 164 30 0 chr2 9368436 9368601 -243887982 + AluJb SINE Alu 129 298 -14 2011 128 6 39 chr2 9368917 9369229 -243887354 - AluSx SINE Alu -10 302 1 2043 131 0 3 chr2 9369337 9369659 -243886924 - AluSx SINE Alu 0 321 1 2456 76 3 0 chr2 9370553 9370857 -243885726 + AluSg SINE Alu 1 305 -5 1637 188 20 10 chr2 9370866 9371159 -243885424 + AluJb SINE Alu 1 296 -16 2155 109 3 16 chr2 9371159 9371471 -243885112 + AluSc SINE Alu 1 308 -1 2150 112 14 3 chr2 9371480 9371776 -243884807 + AluSc SINE Alu 2 300 -9 2260 110 7 0 chr2 9372423 9372731 -243883852 + AluSx SINE Alu 2 311 -1 2406 89 7 0 chr2 9372748 9373050 -243883533 + AluSg SINE Alu 1 304 -6 2030 92 55 14 chr2 9373123 9373416 -243883167 + AluSq SINE Alu 3 307 -6 854 151 0 0 chr2 9373833 9373952 -243882631 - FLAM_C SINE Alu -24 119 1 2461 90 0 0 chr2 9374187 9374488 -243882095 + AluSx SINE Alu 3 303 -9 502 113 94 57 chr2 9375104 9375210 -243881373 - MER5A DNA MER1_type -79 110 1 899 134 25 45 chr2 9375297 9375454 -243881129 + FAM SINE Alu 18 171 -14 239 278 83 14 chr2 9376657 9376729 -243879854 + MIR SINE MIR 34 110 -152 188 279 0 0 chr2 9376854 9376897 -243879686 + L2 LINE L2 3264 3306 -7 2412 97 0 0 chr2 9376934 9377243 -243879340 - AluSg SINE Alu -1 309 1 2095 122 7 3 chr2 9377359 9377662 -243878921 + AluSx SINE Alu 1 304 -8 213 233 0 0 chr2 9377696 9377739 -243878844 - L2 LINE L2 -7 3306 3264 205 200 183 0 chr2 9377817 9377877 -243878706 - MIR SINE MIR -70 192 122 644 125 0 0 chr2 9377914 9378002 -243878581 + AluSg/x SINE Alu 201 288 -22 1949 81 49 0 chr2 9378002 9378248 -243878335 + AluSg SINE Alu 39 296 -14 314 256 64 40 chr2 9378855 9378980 -243877603 + LTR67 LTR ERVL 428 555 -2 191 36 36 0 chr2 9379268 9379296 -243877287 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2314 94 0 3 chr2 9379302 9379601 -243876982 - AluSx SINE Alu -14 298 1 1874 171 14 0 chr2 9379605 9379898 -243876685 - AluJb SINE Alu -15 297 1 1658 174 27 13 chr2 9380202 9380501 -243876082 + AluJo SINE Alu 1 303 -9 841 169 0 0 chr2 9380509 9380639 -243875944 + FLAM_C SINE Alu 1 130 -3 242 276 69 11 chr2 9380706 9380793 -243875790 + MIR SINE MIR 24 115 -93 916 127 0 28 chr2 9381164 9381306 -243875277 - FLAM_C SINE Alu -5 138 1 2431 81 0 7 chr2 9381315 9381623 -243874960 - AluY SINE Alu -5 306 1 1068 213 126 12 chr2 9381923 9382177 -243874406 + AluSg1 SINE Alu 13 295 -14 1869 128 25 75 chr2 9382483 9382804 -243873779 - AluJb SINE Alu -7 305 1 2116 127 6 22 chr2 9382808 9382989 -243873594 - AluSx SINE Alu -2 310 135 2223 102 17 0 chr2 9382989 9383284 -243873299 - AluSp SINE Alu -13 300 1 2116 127 6 22 chr2 9383284 9383417 -243873166 - AluSx SINE Alu -177 135 1 1968 143 3 13 chr2 9384245 9384381 -243872202 + AluJb SINE Alu 1 137 -175 2150 89 6 70 chr2 9384381 9384696 -243871887 + AluSx SINE Alu 1 295 -17 1968 143 3 13 chr2 9384696 9384859 -243871724 + AluJb SINE Alu 137 297 -15 315 125 21 0 chr2 9385013 9385061 -243871522 + MLT1B LTR MaLR 279 327 -63 1813 168 46 98 chr2 9385284 9385350 -243871233 - MLT1C LTR MaLR 0 467 399 1826 138 6 28 chr2 9385350 9385669 -243870914 + AluJb SINE Alu 1 312 0 1813 168 46 98 chr2 9385669 9386083 -243870500 - MLT1C LTR MaLR -68 399 12 1894 120 0 0 chr2 9386551 9386801 -243869782 - AluSx SINE Alu -62 250 1 473 133 44 23 chr2 9386834 9386923 -243869660 + L1MD3 LINE L1 7621 7794 -201 * 813 174 141 24 chr2 9386895 9387108 -243869475 + L1MB5 LINE L1 5935 6172 -2 1607 124 98 23 chr2 9387125 9387391 -243869192 - AluJo SINE Alu -26 286 1 803 166 96 3 chr2 9387412 9387439 -243869144 + L1MD3 LINE L1 7562 7585 -410 2210 112 7 0 chr2 9387439 9387735 -243868848 + AluSx SINE Alu 1 298 -14 803 166 96 3 chr2 9387735 9387914 -243868669 + L1MD3 LINE L1 7585 7995 0 1908 152 0 20 chr2 9387923 9388219 -243868364 + AluSx SINE Alu 1 290 -22 947 124 0 0 chr2 9388771 9388900 -243867683 + FLAM_C SINE Alu 5 133 0 2647 50 0 0 chr2 9389025 9389322 -243867261 + AluSc SINE Alu 3 299 -10 1050 176 126 70 chr2 9389946 9390410 -243866173 - MLT1F LTR MaLR -17 550 2 527 250 30 30 chr2 9390411 9390578 -243866005 + Charlie2 DNA MER1_type 2629 2798 -64 2286 86 3 0 chr2 9390578 9390869 -243865714 - AluY SINE Alu -19 292 1 527 250 30 30 chr2 9390869 9390901 -243865682 + Charlie2 DNA MER1_type 2797 2828 -34 1480 168 97 8 chr2 9390902 9391170 -243865413 + AluJo SINE Alu 2 293 -19 2398 86 3 0 chr2 9391171 9391474 -243865109 + AluSc SINE Alu 1 304 -5 2152 99 0 18 chr2 9391685 9391967 -243864616 + AluSq SINE Alu 1 277 -36 227 206 48 32 chr2 9392032 9392095 -243864488 - L2 LINE L2 -7 3265 3202 30 59 0 0 chr2 9393024 9393075 -243863508 + GC_rich Low_complexity Low_complexity 1 51 0 2292 92 0 3 chr2 9395378 9395671 -243860912 - AluSg SINE Alu -18 292 1 2441 89 0 3 chr2 9395747 9396061 -243860522 - AluSp SINE Alu 0 313 1 395 134 224 0 chr2 9397378 9397445 -243859138 + Tigger4(Zombi) DNA MER2_type 3 84 -2647 2317 120 78 12 chr2 9397447 9397694 -243858889 + Tigger4(Zombi) DNA MER2_type 2297 2583 -148 2467 60 0 0 chr2 9397694 9397978 -243858605 + AluY SINE Alu 1 284 -27 2317 120 78 12 chr2 9397978 9398138 -243858445 + Tigger4(Zombi) DNA MER2_type 2583 2731 0 2008 113 10 52 chr2 9398366 9398675 -243857908 - AluSx SINE Alu -16 296 1 2260 117 3 0 chr2 9398707 9399015 -243857568 + AluSx SINE Alu 1 309 -3 1757 147 51 17 chr2 9399633 9399926 -243856657 + AluJb SINE Alu 1 303 -9 2179 112 0 13 chr2 9400058 9400361 -243856222 - AluSg SINE Alu -11 299 1 204 309 32 11 chr2 9401006 9401100 -243855483 + L2 LINE L2 2599 2694 -620 1664 130 8 16 chr2 9401102 9401355 -243855228 - AluSx SINE Alu -16 296 46 1792 152 0 61 chr2 9401355 9401684 -243854899 - AluJo SINE Alu -3 309 1 225 263 150 0 chr2 9402112 9402192 -243854391 + L2 LINE L2 3216 3307 -6 229 175 0 62 chr2 9402270 9402350 -243854233 + A-rich Low_complexity Low_complexity 3 77 0 1917 129 11 4 chr2 9402458 9402737 -243853846 + AluSc SINE Alu 15 295 -14 336 327 47 57 chr2 9403237 9403330 -243853253 - L1ME4a LINE L1 -175 5946 5854 1955 149 0 13 chr2 9403330 9403638 -243852945 - AluJo SINE Alu -8 304 1 336 327 47 57 chr2 9403638 9403841 -243852742 - L1ME4a LINE L1 -267 5854 5653 2231 113 3 3 chr2 9403861 9404163 -243852420 - AluSq SINE Alu -11 302 1 894 231 16 0 chr2 9404167 9404353 -243852230 - MER5A DNA MER1_type 0 189 1 2198 94 3 7 chr2 9404608 9404905 -243851678 - AluSc SINE Alu -13 296 1 1880 113 60 0 chr2 9404926 9405192 -243851391 - AluSx SINE Alu -30 282 1 268 274 0 0 chr2 9405261 9405323 -243851260 - HAL1 LINE L1 -1868 639 578 1823 157 81 3 chr2 9405403 9405760 -243850823 - L1MA4 LINE L1 -1 6299 5915 1949 140 16 13 chr2 9406452 9406760 -243849823 + AluSx SINE Alu 1 309 -3 800 178 8 0 chr2 9407062 9407191 -243849392 - FLAM_C SINE Alu -3 130 1 1998 137 17 3 chr2 9407391 9407691 -243848892 - AluSx SINE Alu -8 304 1 2253 124 0 3 chr2 9407854 9408168 -243848415 - AluSq SINE Alu 0 313 1 1044 265 66 55 chr2 9408228 9408878 -243847705 - L1MC4a LINE L1 -743 5403 5175 409 263 85 0 chr2 9409056 9409174 -243847409 - MIR SINE MIR -133 129 2 275 329 110 21 chr2 9409521 9409717 -243846866 - MIR SINE MIR -48 214 4 2415 72 0 26 chr2 9410034 9410338 -243846245 + AluY SINE Alu 1 296 -15 883 73 0 33 chr2 9411421 9411572 -243845011 + (TCCCC)n Simple_repeat Simple_repeat 4 149 0 2137 87 45 0 chr2 9411710 9411997 -243844586 - AluY SINE Alu -11 300 1 383 298 17 36 chr2 9412074 9412230 -243844353 + MIR SINE MIR 12 161 -62 180 270 0 0 chr2 9412218 9412255 -243844328 + L2 LINE L2 3218 3254 -18 * 26 0 0 0 chr2 9413492 9413518 -243843065 + AT_rich Low_complexity Low_complexity 1 26 0 345 257 6 80 chr2 9414687 9414862 -243841721 - L1ME4a LINE L1 -109 6012 5851 1105 138 0 0 chr2 9414888 9415063 -243841520 - AluSg/x SINE Alu 0 308 134 2052 131 0 7 chr2 9415063 9415361 -243841222 - AluSc SINE Alu -13 296 1 291 200 158 11 chr2 9415534 9415629 -243840954 - MLT1J2 LTR MaLR -37 413 305 231 238 183 55 chr2 9415664 9415828 -243840755 - MLT1J1 LTR MaLR -239 207 23 2237 110 3 0 chr2 9415882 9416181 -243840402 - AluSc SINE Alu -9 300 1 2167 130 0 0 chr2 9416246 9416539 -243840044 - AluSg SINE Alu -17 293 1 1595 175 7 54 chr2 9416662 9416959 -243839624 + AluJo SINE Alu 1 283 -29 620 183 0 0 chr2 9417102 9417206 -243839377 + U13 snRNA snRNA 1 104 0 1513 183 13 50 chr2 9417331 9417632 -243838951 - AluJo SINE Alu -22 290 1 2251 114 0 0 chr2 9417730 9418028 -243838555 - AluSx SINE Alu -14 298 1 1066 104 0 0 chr2 9418028 9418162 -243838421 - AluSg SINE Alu -176 134 1 2110 138 0 0 chr2 9418195 9418493 -243838090 + AluSx SINE Alu 6 303 -9 517 290 36 44 chr2 9418606 9418854 -243837729 - L1MC4 LINE L1 -140 7902 7657 309 296 165 11 chr2 9418977 9419153 -243837430 - MIR SINE MIR -58 204 2 315 311 107 0 chr2 9419224 9419327 -243837256 + L3 LINE CR1 1461 1574 -3 3349 160 71 63 chr2 9419384 9419455 -243837128 - L1MB7 LINE L1 -9 6175 6106 207 0 0 0 chr2 9419455 9419478 -243837105 + (TG)n Simple_repeat Simple_repeat 2 24 0 1905 118 29 4 chr2 9419479 9419758 -243836825 - AluSx SINE Alu -25 287 2 3349 160 71 63 chr2 9419758 9419982 -243836601 - L1MB7 LINE L1 -78 6106 5885 2165 121 0 3 chr2 9419982 9420280 -243836303 - AluSx SINE Alu -15 297 1 3349 160 71 63 chr2 9420280 9420743 -243835840 - L1MB7 LINE L1 -299 5885 5408 365 261 59 17 chr2 9421073 9421192 -243835391 + L2 LINE L2 3190 3313 0 252 0 0 0 chr2 9422136 9422164 -243834419 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1720 129 4 0 chr2 9422167 9422407 -243834176 - AluSx SINE Alu -71 241 1 30 69 0 0 chr2 9422420 9422478 -243834105 + AT_rich Low_complexity Low_complexity 1 58 0 1983 134 0 3 chr2 9422629 9422934 -243833649 - AluSx SINE Alu 0 304 1 1120 147 0 0 chr2 9424131 9424294 -243832289 - AluSg/x SINE Alu -13 299 137 1215 117 40 85 chr2 9424876 9424956 -243831627 - Tigger2a DNA MER2_type -2274 444 362 1359 177 89 7 chr2 9424956 9425227 -243831356 - AluJo SINE Alu -19 293 1 1215 117 40 85 chr2 9425227 9425393 -243831190 - Tigger2a DNA MER2_type -2356 362 209 944 172 17 22 chr2 9425393 9425573 -243831010 + AluJo SINE Alu 121 299 -13 1002 133 96 21 chr2 9425573 9425761 -243830822 - Tigger2a DNA MER2_type -232 202 1 23 0 0 0 chr2 9425783 9425806 -243830777 + AT_rich Low_complexity Low_complexity 1 23 0 269 216 49 59 chr2 9427203 9427305 -243829278 - L1MC4a LINE L1 -1906 5902 5802 252 0 0 0 chr2 9427578 9427606 -243828977 + (CAGG)n Simple_repeat Simple_repeat 4 31 0 22 0 0 0 chr2 9427906 9427928 -243828655 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 9428548 9428569 -243828014 + (T)n Simple_repeat Simple_repeat 1 21 0 850 247 133 7 chr2 9429256 9429564 -243827019 - HAL1 LINE L1 -738 1769 1423 390 287 131 48 chr2 9429567 9430034 -243826549 - MLT1L LTR MaLR 0 615 6 1797 132 0 28 chr2 9430043 9430331 -243826252 - AluSx SINE Alu -2 310 31 257 245 0 0 chr2 9430369 9430438 -243826145 + L1MC1 LINE L1 5208 5276 -870 850 137 0 8 chr2 9430438 9430562 -243826021 + AluJb SINE Alu 1 123 -189 28 0 0 0 chr2 9430562 9430590 -243825993 + AT_rich Low_complexity Low_complexity 1 28 0 1738 124 30 65 chr2 9430594 9430760 -243825823 + L1MC1 LINE L1 5266 5415 -929 748 191 0 16 chr2 9430760 9430886 -243825697 + FLAM_A SINE Alu 1 124 -9 1738 124 30 65 chr2 9430886 9431058 -243825525 + L1MC1 LINE L1 5415 5592 -752 2399 93 10 0 chr2 9431061 9431371 -243825212 - AluSq SINE Alu 0 313 1 2293 149 95 2 chr2 9431375 9431798 -243824785 + L1MC1 LINE L1 5693 6154 -179 685 169 115 8 chr2 9431808 9431938 -243824645 + FAM SINE Alu 8 151 -34 1414 140 0 18 chr2 9431941 9432163 -243824420 - AluSg/x SINE Alu -19 291 74 2306 113 0 0 chr2 9432725 9433026 -243823557 - AluSx SINE Alu -11 301 1 553 249 166 16 chr2 9433128 9433321 -243823262 - MIR SINE MIR -37 225 4 254 253 46 46 chr2 9433345 9433432 -243823151 - L2 LINE L2 -19 3253 3167 2009 125 10 29 chr2 9433715 9434026 -243822557 - AluSq SINE Alu -8 305 1 209 228 0 35 chr2 9434295 9434352 -243822231 + G-rich Low_complexity Low_complexity 2 56 0 2343 102 0 3 chr2 9435032 9435337 -243821246 + AluSg SINE Alu 1 304 -6 2289 91 3 0 chr2 9435478 9435764 -243820819 - AluSp SINE Alu -26 287 1 564 221 69 35 chr2 9436211 9436356 -243820227 - MLT1E3 LTR MaLR -2 622 473 323 253 30 64 chr2 9436505 9436521 -243820062 - MIR SINE MIR -86 122 107 2195 170 15 15 chr2 9436521 9436910 -243819673 - MLT1B LTR MaLR -1 389 1 323 253 30 64 chr2 9436910 9437011 -243819572 - MIR SINE MIR -101 107 9 1742 146 42 17 chr2 9437247 9437534 -243819049 + AluJb SINE Alu 1 294 -18 180 0 0 0 chr2 9438164 9438184 -243818399 + (T)n Simple_repeat Simple_repeat 1 20 0 198 0 0 0 chr2 9438288 9438310 -243818273 + (A)n Simple_repeat Simple_repeat 1 22 0 1656 175 27 3 chr2 9438418 9438710 -243817873 + AluJo SINE Alu 14 312 0 200 277 75 32 chr2 9438883 9438977 -243817606 - L2 LINE L2 -27 3245 3148 427 274 101 48 chr2 9440083 9440291 -243816292 + MIR SINE MIR 6 224 -38 283 253 44 22 chr2 9440671 9440762 -243815821 + MIR SINE MIR 55 147 -61 1605 181 32 0 chr2 9441024 9441301 -243815282 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 9441337 9441633 -243814950 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 9441874 9442046 -243814537 - FAM SINE Alu 0 175 1 1668 171 46 0 chr2 9442057 9442338 -243814245 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 9442433 9442669 -243813914 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 9442811 9443115 -243813468 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 9443570 9443594 -243812989 + AT_rich Low_complexity Low_complexity 1 24 0 2253 97 6 39 chr2 9443939 9444114 -243812469 - AluSx SINE Alu 0 302 140 2121 125 7 10 chr2 9444114 9444281 -243812302 - AluSx SINE Alu -9 303 136 2130 115 0 7 chr2 9444281 9444576 -243812007 - AluSg SINE Alu -17 293 1 2121 125 7 10 chr2 9444576 9444712 -243811871 - AluSx SINE Alu -176 136 1 2253 97 6 39 chr2 9444712 9444847 -243811736 - AluSx SINE Alu -162 140 2 2422 79 3 16 chr2 9445063 9445380 -243811203 + AluSq SINE Alu 1 313 0 1817 166 46 0 chr2 9445635 9445960 -243810623 + MER47A DNA MER2_type 27 366 0 189 0 0 0 chr2 9447628 9447649 -243808934 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1706 167 13 29 chr2 9447698 9448009 -243808574 + AluJo SINE Alu 1 306 -6 290 259 80 45 chr2 9448156 9448268 -243808315 + L3 LINE CR1 1238 1353 -224 2306 100 3 0 chr2 9450561 9450862 -243805721 + AluSq SINE Alu 1 302 -11 1563 173 26 48 chr2 9450898 9451210 -243805373 + AluJo SINE Alu 1 305 -7 1981 120 7 0 chr2 9451383 9451659 -243804924 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 9451659 9451681 -243804902 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 9453867 9454202 -243802381 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 9454233 9454335 -243802248 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 9454516 9454822 -243801761 + AluSg SINE Alu 1 306 -4 380 252 56 0 chr2 9454877 9454984 -243801599 + MIR SINE MIR 149 261 -1 1943 85 114 7 chr2 9455309 9455581 -243801002 - AluSg SINE Alu -9 301 1 1522 148 13 62 chr2 9455625 9455930 -243800653 + AluJo SINE Alu 15 304 -8 40 37 0 0 chr2 9455942 9455996 -243800587 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 9455996 9456016 -243800567 + (CA)n Simple_repeat Simple_repeat 2 21 0 255 61 0 0 chr2 9456049 9456082 -243800501 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 9456324 9456352 -243800231 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 9457386 9457422 -243799161 + AT_rich Low_complexity Low_complexity 1 36 0 2086 129 24 0 chr2 9457495 9457790 -243798793 + AluSq SINE Alu 1 302 -11 780 177 44 19 chr2 9458773 9458931 -243797652 - AluSg/x SINE Alu -13 297 136 412 238 0 0 chr2 9458930 9459014 -243797569 - FRAM/FAM SINE Alu -101 84 1 * 2101 87 50 3 chr2 9459436 9459735 -243796848 + AluSq SINE Alu 1 313 0 2146 83 6 92 chr2 9459861 9460188 -243796395 - AluSq SINE Alu -14 299 1 2171 117 7 0 chr2 9460205 9460513 -243796070 - AluSx SINE Alu -1 311 2 417 273 43 50 chr2 9461557 9461696 -243794887 + MIR SINE MIR 2 139 -123 279 265 53 53 chr2 9462109 9462241 -243794342 + MIR SINE MIR 16 147 -61 1605 181 32 0 chr2 9462503 9462780 -243793803 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 9462816 9463112 -243793471 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 9463353 9463525 -243793058 - FAM SINE Alu 0 175 1 1724 164 46 0 chr2 9463536 9463817 -243792766 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 9463912 9464148 -243792435 - Tigger3(Golem) DNA MER2_type -7 3022 2762 2325 105 0 0 chr2 9464290 9464594 -243791989 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 9465049 9465073 -243791510 + AT_rich Low_complexity Low_complexity 1 24 0 1990 98 59 0 chr2 9465416 9465703 -243790880 - AluSx SINE Alu -8 304 1 4249 146 38 122 chr2 9465747 9466154 -243790429 - MER21A LTR ERV1 -6 925 485 2179 108 27 0 chr2 9466154 9466449 -243790134 + AluSx SINE Alu 1 303 -9 4249 146 38 122 chr2 9466449 9467038 -243789545 - MER21A LTR ERV1 -446 485 13 1894 125 7 4 chr2 9467446 9467759 -243788824 - AluSq SINE Alu 0 314 1 2317 98 0 3 chr2 9467981 9468276 -243788307 - AluSq SINE Alu -14 299 6 1601 175 0 52 chr2 9468610 9468765 -243787818 - AluJo SINE Alu -24 288 153 2463 80 0 0 chr2 9468765 9469064 -243787519 - AluSg SINE Alu -11 299 1 1601 175 0 52 chr2 9469064 9469194 -243787389 - AluJo SINE Alu -159 153 18 286 218 154 13 chr2 9469940 9470018 -243786565 + L2 LINE L2 3184 3272 0 702 158 79 20 chr2 9470678 9470830 -243785753 + MER3 DNA MER1_type 1 161 -48 586 307 20 0 chr2 9470830 9471032 -243785551 + L1MB7 LINE L1 5970 6175 -9 339 232 11 21 chr2 9471102 9471197 -243785386 + L1MC5 LINE L1 7824 7917 -44 297 125 0 0 chr2 9471226 9471266 -243785317 + MER3 DNA MER1_type 160 199 -10 1845 166 27 0 chr2 9471441 9471736 -243784847 + AluJb SINE Alu 6 308 -4 27 0 0 0 chr2 9471912 9471939 -243784644 + AT_rich Low_complexity Low_complexity 1 27 0 2044 100 7 43 chr2 9471941 9472240 -243784343 - AluSx SINE Alu -24 288 1 1629 81 5 0 chr2 9472784 9472982 -243783601 + AluSc SINE Alu 1 199 -110 2306 100 3 0 chr2 9475226 9475527 -243781056 + AluSq SINE Alu 1 302 -11 1450 182 28 48 chr2 9475563 9475854 -243780729 + AluJo SINE Alu 1 285 -27 1981 120 7 0 chr2 9476046 9476322 -243780261 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 9476322 9476344 -243780239 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 9478530 9478865 -243777718 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 9478896 9478998 -243777585 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 9479179 9479485 -243777098 + AluSg SINE Alu 1 306 -4 391 243 56 0 chr2 9479540 9479647 -243776936 + MIR SINE MIR 149 261 -1 180 0 0 0 chr2 9479972 9479992 -243776591 + (T)n Simple_repeat Simple_repeat 1 20 0 1711 66 0 0 chr2 9480044 9480242 -243776341 - AluSc SINE Alu -109 200 3 997 124 0 0 chr2 9480367 9480496 -243776087 - FLAM_C SINE Alu 0 133 5 1888 152 0 20 chr2 9481048 9481344 -243775239 - AluSx SINE Alu -22 290 1 815 161 101 8 chr2 9481353 9481532 -243775051 - L1MD3 LINE L1 0 7995 7834 2193 112 7 0 chr2 9481532 9481828 -243774755 - AluSx SINE Alu -14 298 1 815 161 101 8 chr2 9481828 9481855 -243774728 - L1MD3 LINE L1 -161 7834 7562 1587 124 98 23 chr2 9481876 9482142 -243774441 + AluJo SINE Alu 1 286 -26 792 170 146 24 chr2 9482159 9482371 -243774212 - L1MB5 LINE L1 -2 6172 5935 461 148 44 23 chr2 9482343 9482432 -243774151 - L1MD3 LINE L1 -201 7794 7621 * 1827 121 4 0 chr2 9482465 9482714 -243773869 + AluSx SINE Alu 1 250 -62 1780 174 56 25 chr2 9483182 9483574 -243773009 + MLT1C LTR MaLR 12 415 -52 1799 137 6 37 chr2 9483593 9483915 -243772668 - AluJb SINE Alu 0 312 1 708 145 120 0 chr2 9485407 9485524 -243771059 + FLAM_C SINE Alu 1 131 -2 247 300 22 22 chr2 9485540 9485630 -243770953 + L1ME LINE L1 5558 5647 -474 2357 86 0 22 chr2 9485751 9486065 -243770518 - AluSq SINE Alu -6 307 1 247 264 57 89 chr2 9487296 9487576 -243769007 - L1M4 LINE L1 -644 5534 5264 374 279 107 62 chr2 9487810 9488054 -243768529 - L1M4 LINE L1 -3638 2508 2254 3772 172 41 20 chr2 9488070 9488775 -243767808 - L1MB8 LINE L1 0 6178 5459 2507 62 0 3 chr2 9488954 9489258 -243767325 + AluY SINE Alu 1 303 -8 231 114 0 0 chr2 9489526 9489561 -243767022 + (A)n Simple_repeat Simple_repeat 1 35 0 736 219 12 19 chr2 9489578 9489738 -243766845 + MER5A DNA MER1_type 28 186 -3 213 342 26 51 chr2 9489818 9489935 -243766648 - L2 LINE L2 -10 3262 3149 1698 171 3 13 chr2 9490324 9490628 -243765955 + AluJo SINE Alu 1 301 -11 234 311 185 44 chr2 9490630 9491113 -243765470 - L2 LINE L2 0 3313 2760 1947 123 7 20 chr2 9491727 9492027 -243764556 - AluSx SINE Alu -16 296 1 386 69 103 0 chr2 9496720 9496778 -243759805 - MADE1 DNA Mariner -15 65 2 1226 22 0 0 chr2 9497650 9497788 -243758795 - L1PA5 LINE L1 -271 5883 5746 2237 94 19 7 chr2 9497859 9498168 -243758415 - AluSq SINE Alu 0 313 1 1755 108 44 4 chr2 9498843 9499093 -243757490 + AluSx SINE Alu 18 277 -35 252 0 0 0 chr2 9499097 9499125 -243757458 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 576 247 149 39 chr2 9499491 9500090 -243756493 + L1MEd LINE L1 991 1641 -4488 482 203 163 0 chr2 9500449 9500572 -243756011 + MIR SINE MIR 104 245 -17 2259 97 3 0 chr2 9500675 9500965 -243755618 - AluSp SINE Alu -22 291 1 21 0 0 0 chr2 9500970 9500991 -243755592 + AT_rich Low_complexity Low_complexity 1 21 0 1896 127 11 7 chr2 9501837 9502121 -243754462 - AluSx SINE Alu -23 289 5 759 57 67 9 chr2 9505423 9505528 -243751055 + HY1 scRNA scRNA 1 111 -1 183 264 287 0 chr2 9505968 9506055 -243750528 + MIR SINE MIR 20 131 -131 866 195 99 22 chr2 9506230 9507088 -243749495 + L1M3 LINE L1 4765 5763 -420 180 0 0 0 chr2 9507109 9507129 -243749454 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 898 152 96 63 chr2 9507261 9507531 -243749052 + L1MB3 LINE L1 5108 5386 -760 2170 153 112 49 chr2 9507553 9507787 -243748796 + L1MB3 LINE L1 5499 5717 -457 2281 73 0 7 chr2 9507787 9508095 -243748488 - AluY SINE Alu 0 306 1 2170 153 112 49 chr2 9508095 9508473 -243748110 + L1MB3 LINE L1 5717 6173 -1 1713 166 42 3 chr2 9508490 9508774 -243747809 + AluJo SINE Alu 1 295 -17 2295 100 0 3 chr2 9509368 9509677 -243746906 + AluY SINE Alu 1 308 -3 2097 117 7 32 chr2 9509874 9510183 -243746400 + AluSg SINE Alu 2 302 -8 2302 88 10 0 chr2 9510200 9510497 -243746086 + AluSg SINE Alu 1 300 -10 1428 113 0 0 chr2 9510643 9510838 -243745745 + AluSg/x SINE Alu 94 288 -24 321 255 43 11 chr2 9510849 9510943 -243745640 + L1MC4a LINE L1 5376 5472 -2336 198 0 0 0 chr2 9510943 9510965 -243745618 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 885 130 23 0 chr2 9510965 9511096 -243745487 - AluSq/x SINE Alu -179 134 1 324 249 37 21 chr2 9511109 9511224 -243745359 + L1MC4a LINE L1 5475 5591 -530 439 285 75 31 chr2 9511247 9511475 -243745108 + L1MC4a LINE L1 5705 5942 -1866 1909 145 3 6 chr2 9511518 9511829 -243744754 + AluSx SINE Alu 1 310 -2 1831 161 17 7 chr2 9511948 9512246 -243744337 + AluJb SINE Alu 5 305 -7 227 170 106 0 chr2 9512423 9512470 -243744113 - L2 LINE L2 -5 3267 3216 743 278 0 0 chr2 9512601 9512774 -243743809 + MER8 DNA MER2_type 5 177 -62 330 200 46 0 chr2 9512803 9512868 -243743715 + MER8 DNA MER2_type 172 239 0 26 0 0 0 chr2 9513179 9513205 -243743378 + AT_rich Low_complexity Low_complexity 1 26 0 676 208 129 102 chr2 9513256 9513442 -243743141 + MER20B DNA MER1_type 83 262 -521 1899 148 3 10 chr2 9513442 9513739 -243742844 - AluSx SINE Alu -17 295 1 676 208 129 102 chr2 9513739 9513805 -243742778 + MER20B DNA MER1_type 262 347 -436 2088 128 0 16 chr2 9513805 9514109 -243742474 + AluSx SINE Alu 1 299 -13 676 208 129 102 chr2 9514109 9514149 -243742434 + MER20B DNA MER1_type 347 384 -399 417 239 7 49 chr2 9514466 9514608 -243741975 + FLAM_C SINE Alu 8 143 0 288 0 0 0 chr2 9514622 9514654 -243741929 + (T)n Simple_repeat Simple_repeat 1 32 0 1278 166 67 24 chr2 9514660 9514913 -243741670 + AluJo SINE Alu 6 269 -43 1549 190 45 3 chr2 9515049 9515339 -243741244 - AluJo SINE Alu -10 302 1 2056 121 7 14 chr2 9515536 9515833 -243740750 + AluSx SINE Alu 1 295 -17 2150 107 10 23 chr2 9515995 9516304 -243740279 - AluSq SINE Alu -8 305 1 14161 129 35 26 chr2 9516397 9516749 -243739834 - Tigger1 DNA MER2_type -18 2400 2053 2373 100 7 0 chr2 9516749 9517059 -243739524 - AluSp SINE Alu -1 312 1 14161 129 35 26 chr2 9517059 9519085 -243737498 - Tigger1 DNA MER2_type -365 2053 1 988 89 16 0 chr2 9519352 9519475 -243737108 + AluSp SINE Alu 1 125 -188 1737 161 94 16 chr2 9519613 9519985 -243736598 + L1MB3 LINE L1 5773 6173 -10 1770 169 42 0 chr2 9520008 9520292 -243736291 + AluJo SINE Alu 1 296 -16 1615 178 44 0 chr2 9520292 9520613 -243735970 + L1MB7 LINE L1 5827 6161 -23 1349 191 25 48 chr2 9520851 9521165 -243735418 - AluJb SINE Alu -5 307 1 630 190 0 0 chr2 9521813 9521929 -243734654 + AluSg/x SINE Alu 194 309 0 35 0 0 0 chr2 9521939 9521974 -243734609 + AT_rich Low_complexity Low_complexity 1 35 0 565 203 79 57 chr2 9523297 9523474 -243733109 + Charlie1b DNA MER1_type 11 191 -332 1483 198 100 35 chr2 9523950 9524062 -243732521 - L1ME2 LINE L1 0 6164 6061 3834 62 4 0 chr2 9524062 9524549 -243732034 + L1PA7 LINE L1 5666 6154 0 1483 198 100 35 chr2 9524549 9524946 -243731637 - L1ME2 LINE L1 -103 6061 5622 276 210 70 20 chr2 9524968 9525068 -243731515 - L1MC5 LINE L1 -52 7909 7805 318 275 211 28 chr2 9525605 9525747 -243730836 + L1ME LINE L1 5493 5660 -461 2217 99 7 0 chr2 9525843 9526151 -243730432 + AluSp SINE Alu 1 310 0 1858 144 46 0 chr2 9526338 9526622 -243729961 + AluJb SINE Alu 1 297 -15 634 232 49 22 chr2 9526843 9527028 -243729555 - MER20 DNA MER1_type 0 219 30 2138 110 14 7 chr2 9527103 9527395 -243729188 - AluSx SINE Alu -18 294 1 1421 107 0 5 chr2 9527440 9527627 -243728956 + AluSg/x SINE Alu 111 296 -16 676 279 109 5 chr2 9527907 9528108 -243728475 + MIR SINE MIR 37 258 -4 296 300 128 28 chr2 9528094 9528274 -243728309 - MIR SINE MIR -58 204 7 * 2201 95 17 7 chr2 9528788 9529082 -243727501 - AluSx SINE Alu -15 297 1 639 198 33 0 chr2 9529908 9530029 -243726554 + FLAM_C SINE Alu 9 133 -10 368 257 57 86 chr2 9530307 9530482 -243726101 + L2 LINE L2 3122 3291 -22 28 0 0 0 chr2 9532804 9532832 -243723751 + GC_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr2 9533634 9533662 -243722921 + GC_rich Low_complexity Low_complexity 1 28 0 27 92 0 0 chr2 9533886 9533962 -243722621 + GC_rich Low_complexity Low_complexity 1 76 0 186 233 0 0 chr2 9536046 9536089 -243720494 + MIR SINE MIR 85 127 -135 909 247 20 51 chr2 9536314 9536569 -243720014 - MIR SINE MIR -3 259 13 371 305 93 55 chr2 9536820 9536957 -243719626 + MIR SINE MIR 15 160 -102 1872 160 3 7 chr2 9536957 9537245 -243719338 + AluJb SINE Alu 1 287 -25 371 305 93 55 chr2 9537245 9537346 -243719237 + MIR SINE MIR 160 256 -6 1045 238 47 63 chr2 9537862 9537985 -243718598 + MLT2C2 LTR ERVL 2 125 -339 2364 109 0 0 chr2 9537985 9538288 -243718295 - AluSx SINE Alu -9 303 1 1045 238 47 63 chr2 9538288 9538593 -243717990 + MLT2C2 LTR ERVL 125 423 -41 2246 121 0 3 chr2 9538682 9538980 -243717603 - AluSx SINE Alu -15 297 1 210 37 0 0 chr2 9539076 9539103 -243717480 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 212 340 123 9 chr2 9539145 9539251 -243717332 - MIR SINE MIR -108 154 37 318 262 78 10 chr2 9539945 9540048 -243716535 - L2 LINE L2 -4 3309 3200 824 219 45 28 chr2 9541157 9541335 -243715248 + MIR SINE MIR 2 182 -80 297 351 71 51 chr2 9541383 9541733 -243714850 + L2 LINE L2 2916 3272 0 589 262 48 114 chr2 9542875 9543444 -243713139 - LTR67 LTR ERVL -8 549 19 236 242 253 33 chr2 9543788 9543879 -243712704 - L2 LINE L2 0 3272 3162 186 322 111 30 chr2 9543913 9544112 -243712471 - L2 LINE L2 -264 3049 2835 2368 81 3 3 chr2 9544136 9544434 -243712149 + AluSg SINE Alu 1 298 -12 894 135 0 8 chr2 9544516 9544649 -243711934 - FLAM_C SINE Alu -1 132 1 1300 139 17 13 chr2 9544743 9544973 -243711610 - L1MB3 LINE L1 -2 6181 5951 2376 116 0 0 chr2 9545210 9545521 -243711062 - AluSx SINE Alu -1 311 1 501 264 184 20 chr2 9545880 9546081 -243710502 + MIR SINE MIR 23 256 -6 2454 87 0 0 chr2 9546163 9546473 -243710110 - AluY SINE Alu -1 310 1 1170 46 0 0 chr2 9546476 9546607 -243709976 - AluY SINE Alu -179 132 2 243 292 15 15 chr2 9547629 9547694 -243708889 + L2 LINE L2 3237 3301 -12 2613 56 0 0 chr2 9549053 9549355 -243707228 + AluY SINE Alu 1 302 -9 260 240 56 64 chr2 9549662 9549787 -243706796 + L2 LINE L2 3137 3260 -12 385 306 68 88 chr2 9550197 9550606 -243705977 - L2 LINE L2 -46 3226 2826 449 290 16 24 chr2 9550804 9550928 -243705655 - MIR SINE MIR -63 145 23 320 333 26 0 chr2 9551751 9551865 -243704718 + MIR SINE MIR 4 120 -142 21 0 0 0 chr2 9551865 9551886 -243704697 + AT_rich Low_complexity Low_complexity 1 21 0 502 186 41 10 chr2 9551907 9552004 -243704579 + MER33 DNA MER1_type 10 109 -215 470 290 101 63 chr2 9552238 9552476 -243704107 + MIR SINE MIR 16 262 0 251 259 0 0 chr2 9552716 9552770 -243703813 - LTR33 LTR ERVL -358 163 110 1303 133 282 0 chr2 9552770 9553011 -243703572 + AluSg1 SINE Alu 1 309 0 2374 119 0 0 chr2 9553028 9553340 -243703243 + AluSx SINE Alu 1 312 0 326 243 19 19 chr2 9553340 9553440 -243703143 - LTR33 LTR ERVL -398 123 21 564 332 21 0 chr2 9553459 9553646 -243702937 + MIR3 SINE MIR 5 195 -13 1594 177 141 52 chr2 9553654 9554139 -243702444 + L1MB7 LINE L1 5359 5889 -295 7117 58 9 1 chr2 9554150 9555044 -243701539 + L1PA5 LINE L1 5254 6154 0 436 289 31 0 chr2 9555136 9555295 -243701288 + LTR33 LTR ERVL 304 467 -54 1188 141 3 0 chr2 9555341 9555726 -243700857 + (TCCA)n Simple_repeat Simple_repeat 1 386 0 213 205 0 0 chr2 9555739 9555778 -243700805 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 220 267 95 103 chr2 9555815 9555931 -243700652 - L2 LINE L2 -8 3264 3150 222 118 0 0 chr2 9555976 9556010 -243700573 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 321 282 70 5 chr2 9557017 9557182 -243699401 + MIR SINE MIR 16 191 -63 191 286 143 0 chr2 9557251 9557307 -243699276 + MIR SINE MIR 87 150 -58 186 43 0 0 chr2 9557746 9557769 -243698814 + (CAGCC)n Simple_repeat Simple_repeat 1 23 0 270 250 45 0 chr2 9557833 9557921 -243698662 + CT-rich Low_complexity Low_complexity 4 95 0 635 253 125 108 chr2 9558001 9558203 -243698380 + L3 LINE CR1 1083 1280 -297 1906 134 10 7 chr2 9558203 9558493 -243698090 + AluSx SINE Alu 1 291 -21 635 253 125 108 chr2 9558493 9558761 -243697822 + L3 LINE CR1 1280 1561 -16 2284 117 3 3 chr2 9559217 9559525 -243697058 + AluSg SINE Alu 1 308 -2 1728 145 89 3 chr2 9559852 9560134 -243696449 + AluSx SINE Alu 1 306 -6 640 197 50 67 chr2 9561348 9561587 -243694996 - L1MC5 LINE L1 -64 7897 7663 1784 148 42 0 chr2 9561638 9561901 -243694682 - AluJo SINE Alu -38 274 1 414 283 47 57 chr2 9561901 9562193 -243694390 - L1MC5 LINE L1 -305 7656 7366 440 256 34 68 chr2 9562363 9562407 -243694176 + LTR16C LTR ERVL 167 211 -280 1974 149 3 3 chr2 9562407 9562727 -243693856 + AluJb SINE Alu 1 312 0 2294 110 0 0 chr2 9562735 9563021 -243693562 + AluSx SINE Alu 1 287 -20 192 40 0 0 chr2 9563021 9563046 -243693537 + (CA)n Simple_repeat Simple_repeat 2 26 0 440 256 34 68 chr2 9563051 9563173 -243693410 + LTR16C LTR ERVL 218 336 -155 23 0 0 0 chr2 9563188 9563211 -243693372 + AT_rich Low_complexity Low_complexity 1 23 0 361 261 104 8 chr2 9563273 9563407 -243693176 + LTR16C LTR ERVL 345 491 0 183 188 0 0 chr2 9563999 9564047 -243692536 + (TG)n Simple_repeat Simple_repeat 2 49 0 253 324 36 36 chr2 9564235 9564346 -243692237 + MIR SINE MIR 41 151 -111 356 202 9 64 chr2 9564550 9564659 -243691924 - LTR67 LTR ERVL -22 535 433 1837 159 0 21 chr2 9564879 9565162 -243691421 - AluJb SINE Alu -30 282 6 415 277 150 58 chr2 9565427 9565476 -243691107 + L1ME4a LINE L1 5772 5815 -306 2445 87 0 0 chr2 9565476 9565774 -243690809 - AluSx SINE Alu -14 298 1 415 277 150 58 chr2 9565774 9565984 -243690599 + L1ME4a LINE L1 5815 6055 -66 193 292 79 11 chr2 9568019 9568108 -243688475 + L2 LINE L2 2664 2758 -556 2400 107 0 3 chr2 9568610 9568920 -243687663 + AluSg SINE Alu 1 309 -1 2244 112 0 3 chr2 9570111 9570415 -243686168 + AluSx SINE Alu 1 303 -9 1886 114 0 8 chr2 9571343 9571645 -243684938 - AluSx SINE Alu 0 312 30 2320 69 7 33 chr2 9572795 9573101 -243683482 - AluY SINE Alu -13 298 1 2294 112 3 10 chr2 9573169 9573483 -243683100 - AluSx SINE Alu 0 312 1 2327 86 14 0 chr2 9574012 9574304 -243682279 + AluSx SINE Alu 1 296 -16 1946 159 14 0 chr2 9574403 9574699 -243681884 + AluJo SINE Alu 1 300 -12 5156 135 94 23 chr2 9574754 9575325 -243681258 - L1MC1 LINE L1 -9 6324 5795 2221 108 3 16 chr2 9575325 9575630 -243680953 - AluSx SINE Alu -11 301 1 5156 135 94 23 chr2 9575630 9575961 -243680622 - L1MC1 LINE L1 -538 5795 5489 2344 108 0 0 chr2 9575961 9576257 -243680326 - AluSx SINE Alu -16 296 1 5156 135 94 23 chr2 9576257 9576434 -243680149 - L1MC1 LINE L1 -844 5489 5167 2149 152 0 0 chr2 9576434 9576731 -243679852 + AluSx SINE Alu 1 297 -15 1355 153 80 90 chr2 9576780 9577081 -243679502 + AluJo SINE Alu 1 298 -14 265 232 0 61 chr2 9577253 9577335 -243679248 - MIR SINE MIR -116 92 16 1346 43 0 0 chr2 9577620 9577804 -243678779 + L1PA4 LINE L1 5983 6166 0 546 176 235 0 chr2 9578249 9578402 -243678181 - MER53 DNA DNA 0 189 1 198 323 125 67 chr2 9579406 9579719 -243676864 + L2 LINE L2 2921 3251 -21 937 189 13 13 chr2 9579976 9580135 -243676448 - FRAM SINE Alu -15 161 3 1922 134 38 3 chr2 9580149 9580439 -243676144 - AluSx SINE Alu -12 300 1 571 293 109 66 chr2 9580488 9580621 -243675962 - L1ME4a LINE L1 -296 5825 5699 2348 100 0 13 chr2 9580621 9580931 -243675652 - AluSx SINE Alu -6 306 1 571 293 109 66 chr2 9580931 9581343 -243675240 - L1ME4a LINE L1 -422 5699 5234 384 77 0 0 chr2 9581343 9581395 -243675188 + (TA)n Simple_repeat Simple_repeat 1 52 0 571 293 109 66 chr2 9581395 9581512 -243675071 - L1ME4a LINE L1 -887 5234 5124 24 0 0 0 chr2 9581616 9581640 -243674943 + AT_rich Low_complexity Low_complexity 1 24 0 2157 135 52 17 chr2 9581746 9582108 -243674475 - THE1C LTR MaLR 0 375 1 2187 152 28 6 chr2 9582212 9582567 -243674016 + MLT1A1 LTR MaLR 3 365 0 1631 162 65 23 chr2 9583083 9583391 -243673192 - MLT1A1 LTR MaLR 0 365 45 1224 161 55 14 chr2 9583391 9583749 -243672834 + LTR47A LTR ERVL 1 452 0 318 85 0 21 chr2 9583752 9583799 -243672784 - MLT1A1 LTR MaLR -328 46 1 381 309 54 46 chr2 9583850 9584078 -243672505 - MIR SINE MIR -17 245 16 1851 158 13 17 chr2 9584204 9584502 -243672081 + AluJb SINE Alu 1 297 -15 2279 79 9 32 chr2 9584920 9585235 -243671348 + AluSx SINE Alu 1 308 -4 180 125 0 0 chr2 9585279 9585311 -243671272 + (CA)n Simple_repeat Simple_repeat 1 32 0 2062 153 3 3 chr2 9585468 9585776 -243670807 - AluJb SINE Alu -4 308 1 3593 208 68 19 chr2 9585805 9586498 -243670085 + Charlie1a DNA MER1_type 5 755 -2006 2321 105 0 3 chr2 9586498 9586803 -243669780 - AluSq SINE Alu -9 304 1 3593 208 68 19 chr2 9586803 9587028 -243669555 + Charlie1a DNA MER1_type 755 968 -487 1994 111 61 0 chr2 9587029 9587308 -243669275 - AluSq SINE Alu -17 296 1 900 169 144 88 chr2 9587314 9587503 -243669080 + Charlie1a DNA MER1_type 1077 1254 -1507 1721 165 0 4 chr2 9587503 9587770 -243668813 - AluJb SINE Alu -45 267 2 900 169 144 88 chr2 9587770 9587934 -243668649 + Charlie1a DNA MER1_type 1254 1450 -5 281 279 177 44 chr2 9588307 9588421 -243668162 + MER5A DNA MER1_type 11 153 -36 2078 114 7 36 chr2 9588421 9588728 -243667855 + AluSx SINE Alu 1 298 -14 281 279 177 44 chr2 9588728 9588771 -243667812 + MER5A DNA MER1_type 153 189 0 1967 147 39 74 chr2 9589096 9589634 -243666949 - MER51A LTR ERV1 0 640 1 689 335 99 16 chr2 9589882 9590640 -243665943 + L1MEc LINE L1 1000 1820 -4576 310 335 58 36 chr2 9590758 9590982 -243665601 + L1MEc LINE L1 1940 2168 -4047 911 222 6 11 chr2 9590988 9591164 -243665419 + FAM SINE Alu 1 175 0 302 217 170 34 chr2 9591182 9591216 -243665367 - L1MC5 LINE L1 -36 7925 7897 1455 202 6 42 chr2 9591216 9591528 -243665055 + AluJo SINE Alu 1 301 -11 302 217 170 34 chr2 9591528 9591728 -243664855 - L1MC5 LINE L1 -64 7897 7659 414 299 77 58 chr2 9591728 9591787 -243664796 + L1MEc LINE L1 2181 2237 -3978 2126 140 10 0 chr2 9591787 9592095 -243664488 - AluSx SINE Alu -1 311 1 414 299 77 58 chr2 9592095 9592242 -243664341 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 9592355 9592622 -243663961 - AluJo SINE Alu 0 312 16 1798 68 5 5 chr2 9592905 9593124 -243663459 + AluSp SINE Alu 1 219 -94 825 98 0 49 chr2 9593124 9593246 -243663337 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 9593932 9593959 -243662624 + (CA)n Simple_repeat Simple_repeat 2 28 0 296 114 0 0 chr2 9594204 9594248 -243662335 + U5 snRNA snRNA 8 51 -65 314 244 344 6 chr2 9594346 9594526 -243662057 + MIR SINE MIR 21 261 -1 2385 97 13 0 chr2 9594941 9595249 -243661334 - AluSx SINE Alu 0 312 1 210 260 26 39 chr2 9596241 9596318 -243660265 + MIR3 SINE MIR 128 203 -5 189 231 0 0 chr2 9596711 9596750 -243659833 + MIR SINE MIR 91 129 -79 2278 110 0 10 chr2 9597419 9597728 -243658855 - AluSx SINE Alu -6 306 1 1402 147 107 20 chr2 9598331 9598583 -243658000 - AluJb SINE Alu -6 306 33 301 283 44 75 chr2 9598583 9598639 -243657944 - HAL1 LINE L1 -137 2370 2314 2037 93 41 10 chr2 9598639 9598930 -243657653 - AluSq SINE Alu -13 300 1 301 283 44 75 chr2 9598930 9599032 -243657551 - HAL1 LINE L1 -193 2314 2217 2237 157 95 17 chr2 9599050 9599471 -243657112 - LTR32 LTR ERVL -6 465 12 1766 286 54 26 chr2 9599483 9600156 -243656427 - HAL1 LINE L1 -310 2197 1497 2039 143 20 3 chr2 9600156 9600457 -243656126 + AluSx SINE Alu 1 306 -6 1766 286 54 26 chr2 9600457 9600580 -243656003 - HAL1 LINE L1 -1010 1497 1379 993 285 124 14 chr2 9600613 9601119 -243655464 - HAL1 LINE L1 -1832 675 114 240 224 0 0 chr2 9601119 9601186 -243655397 + (TG)n Simple_repeat Simple_repeat 1 67 0 247 265 88 0 chr2 9601186 9601254 -243655329 - HAL1 LINE L1 -2421 86 13 373 243 21 104 chr2 9601834 9601898 -243654685 - MIR3 SINE MIR 0 208 140 280 81 0 0 chr2 9601898 9601935 -243654648 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2110 90 25 11 chr2 9601937 9602214 -243654369 - AluSq SINE Alu -32 281 1 373 243 21 104 chr2 9602214 9602290 -243654293 - MIR3 SINE MIR -69 139 77 307 313 61 17 chr2 9603141 9603256 -243653327 + MIR SINE MIR 31 150 -112 325 285 65 32 chr2 9603327 9603450 -243653133 + MIR3 SINE MIR 71 197 -11 217 372 11 11 chr2 9603456 9603550 -243653033 + MER5A DNA MER1_type 7 100 -89 307 254 106 35 chr2 9603631 9603773 -243652810 + L1M4 LINE L1 3044 3195 -2951 232 259 86 0 chr2 9603908 9603966 -243652617 + MIR SINE MIR 88 150 -112 325 285 65 32 chr2 9604037 9604160 -243652423 + MIR3 SINE MIR 71 197 -11 240 362 11 11 chr2 9604166 9604260 -243652323 + MER5A DNA MER1_type 7 100 -89 186 302 39 116 chr2 9604389 9604518 -243652065 + L2 LINE L2 2606 2724 -590 836 281 117 12 chr2 9604850 9605426 -243651157 - L1ME LINE L1 -357 5813 5175 227 309 46 26 chr2 9605501 9605653 -243650930 + L1M4 LINE L1 4786 4940 -1206 380 322 0 8 chr2 9605653 9605771 -243650812 - L1ME LINE L1 -981 5165 5049 568 255 77 16 chr2 9605857 9606104 -243650479 - L1ME LINE L1 -1098 5048 4787 392 312 105 75 chr2 9606314 9606609 -243649974 + L2 LINE L2 2883 3186 -86 593 264 156 26 chr2 9606684 9606915 -243649668 - MIR SINE MIR 0 262 2 209 309 24 57 chr2 9607638 9607761 -243648822 + MIR SINE MIR 11 129 -79 2462 78 3 0 chr2 9608122 9608429 -243648154 + AluY SINE Alu 1 308 -3 2775 102 3 0 chr2 9609109 9609472 -243647111 + THE1B LTR MaLR 1 364 0 299 185 34 134 chr2 9609547 9609666 -243646917 - MER20B DNA MER1_type -675 108 2 1894 97 89 4 chr2 9609684 9609975 -243646608 + AluSc SINE Alu 1 313 0 281 193 125 23 chr2 9610006 9610094 -243646489 - L2 LINE L2 -14 3299 3203 186 43 0 0 chr2 9611018 9611041 -243645542 + (TG)n Simple_repeat Simple_repeat 2 24 0 2281 92 7 3 chr2 9611283 9611577 -243645006 + AluSx SINE Alu 1 295 -17 411 214 296 0 chr2 9611828 9612034 -243644549 + L2 LINE L2 2509 2775 -539 189 273 23 0 chr2 9612227 9612271 -243644312 + L2 LINE L2 3265 3309 -4 2217 99 3 0 chr2 9612355 9612639 -243643944 - AluSx SINE Alu -27 285 1 376 260 107 30 chr2 9613088 9613257 -243643326 - MIR SINE MIR 0 262 81 623 338 64 7 chr2 9613276 9613696 -243642887 + LTR16B LTR ERVL 21 464 0 499 265 103 27 chr2 9613718 9614135 -243642448 + MLT1J LTR MaLR 10 511 0 616 138 26 17 chr2 9614223 9614339 -243642244 + LTR45B LTR ERV1 12 128 -361 249 200 0 0 chr2 9614379 9614434 -243642149 + LTR45B LTR ERV1 129 183 -306 2246 103 3 7 chr2 9614498 9614798 -243641785 - AluSq SINE Alu -14 299 1 860 182 120 29 chr2 9614810 9615052 -243641531 + LTR45B LTR ERV1 226 489 0 316 274 234 51 chr2 9615909 9616263 -243640320 + L2 LINE L2 2853 3271 -1 344 282 86 58 chr2 9616719 9616893 -243639690 + MIR SINE MIR 34 212 -50 784 164 0 0 chr2 9617150 9617272 -243639311 + FLAM_C SINE Alu 1 122 -21 237 33 0 0 chr2 9617272 9617302 -243639281 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 590 11 34 11 chr2 9617329 9617417 -243639166 + (CA)n Simple_repeat Simple_repeat 1 90 0 386 287 108 46 chr2 9617582 9617727 -243638856 + L1ME4a LINE L1 5211 5346 -818 2258 112 0 7 chr2 9617727 9618023 -243638560 + AluSx SINE Alu 1 294 -18 386 287 108 46 chr2 9618023 9618135 -243638448 + L1ME4a LINE L1 5346 5485 -679 2017 123 10 30 chr2 9618152 9618452 -243638131 + AluJo SINE Alu 1 294 -18 258 248 111 46 chr2 9618455 9618608 -243637975 + L1ME4a LINE L1 5579 5741 -380 236 233 67 42 chr2 9618708 9618828 -243637755 + L1ME4a LINE L1 5974 6096 -25 221 316 90 32 chr2 9619324 9619479 -243637104 + MIR SINE MIR 20 183 -79 212 333 51 0 chr2 9620016 9620094 -243636489 + MIR SINE MIR 56 137 -125 250 290 56 11 chr2 9620477 9620585 -243635998 + MIR SINE MIR 32 144 -64 1745 131 0 51 chr2 9620589 9620864 -243635719 + AluJo SINE Alu 34 294 -18 286 229 114 43 chr2 9620969 9621109 -243635474 + MIR SINE MIR 63 212 -50 2202 124 0 7 chr2 9621384 9621691 -243634892 + AluSx SINE Alu 1 305 -7 1916 99 35 3 chr2 9621921 9622205 -243634378 - AluY SINE Alu -18 293 1 2121 124 3 7 chr2 9622558 9622857 -243633726 - AluSx SINE Alu -12 300 3 1149 88 71 28 chr2 9623508 9623690 -243632893 - AluSq SINE Alu -123 190 1 2559 90 0 0 chr2 9623742 9624053 -243632530 - AluSx SINE Alu -1 311 1 339 286 51 0 chr2 9624278 9624376 -243632207 + MIR SINE MIR 119 221 -41 2301 108 0 22 chr2 9624468 9624782 -243631801 + AluSx SINE Alu 1 307 -5 244 315 110 16 chr2 9624898 9625025 -243631558 + MIR3 SINE MIR 64 202 -6 811 137 73 12 chr2 9625470 9625640 -243630943 - MSTC LTR MaLR -229 167 2 1310 137 5 0 chr2 9625691 9625895 -243630688 + MER2 DNA MER2_type 2 206 -139 1671 171 9 29 chr2 9625901 9626216 -243630367 - AluSx SINE Alu -3 309 1 21 36 0 0 chr2 9626216 9626244 -243630339 + AT_rich Low_complexity Low_complexity 1 28 0 2284 82 7 7 chr2 9626244 9626536 -243630047 + AluSx SINE Alu 7 298 -14 2021 146 37 75 chr2 9626904 9627443 -243629140 - MER51A LTR ERV1 0 640 1 776 334 98 14 chr2 9627691 9628449 -243628134 + L1MEc LINE L1 1000 1820 -4576 325 339 58 36 chr2 9628567 9628791 -243627792 + L1MEc LINE L1 1940 2168 -4047 845 222 6 11 chr2 9628797 9628973 -243627610 + FAM SINE Alu 1 175 0 289 234 170 34 chr2 9628991 9629025 -243627558 - L1MC5 LINE L1 -36 7925 7897 1401 210 10 39 chr2 9629025 9629335 -243627248 + AluJo SINE Alu 1 301 -11 289 234 170 34 chr2 9629335 9629535 -243627048 - L1MC5 LINE L1 -64 7897 7659 422 299 77 58 chr2 9629535 9629594 -243626989 + L1MEc LINE L1 2181 2237 -3978 2140 140 10 0 chr2 9629594 9629902 -243626681 - AluSx SINE Alu -1 311 1 422 299 77 58 chr2 9629902 9630049 -243626534 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 9630162 9630429 -243626154 - AluJo SINE Alu 0 312 16 1720 78 9 5 chr2 9630709 9630927 -243625656 + AluSp SINE Alu 1 219 -94 827 98 0 49 chr2 9630927 9631049 -243625534 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 9631734 9631761 -243624822 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 114 0 0 chr2 9632006 9632050 -243624533 + U5 snRNA snRNA 8 51 -65 278 169 264 0 chr2 9632214 9632328 -243624255 + MIR SINE MIR 104 261 -1 261 83 0 0 chr2 9632738 9632774 -243623809 + (T)n Simple_repeat Simple_repeat 1 36 0 2213 123 8 14 chr2 9633338 9633695 -243622888 - THE1A LTR MaLR 0 355 1 2205 88 7 11 chr2 9634071 9634397 -243622186 - AluSp SINE Alu 0 325 1 198 196 22 0 chr2 9634619 9634665 -243621918 + MIR SINE MIR 47 93 -169 488 78 0 117 chr2 9634685 9634726 -243621857 - MER53 DNA DNA -5 184 140 2155 123 3 0 chr2 9634726 9635028 -243621555 + AluSx SINE Alu 1 303 -9 488 78 0 117 chr2 9635028 9635089 -243621494 - MER53 DNA DNA -49 140 94 2270 122 0 3 chr2 9635217 9635528 -243621055 + AluSq SINE Alu 1 310 -3 364 211 26 0 chr2 9635615 9635683 -243620900 - MER58A DNA MER1_type -1 223 154 614 202 54 0 chr2 9635683 9635812 -243620771 - MER58A DNA MER1_type 0 136 1 380 329 43 69 chr2 9636486 9636669 -243619914 - L2 LINE L2 -29 3284 3109 2372 166 25 52 chr2 9636669 9637192 -243619391 + LTR54 LTR ERV1 2 510 0 380 329 43 69 chr2 9637192 9637285 -243619298 - L2 LINE L2 -204 3109 3015 227 304 108 0 chr2 9637354 9637456 -243619127 - LTR33A LTR ERVL 0 523 411 2378 119 0 0 chr2 9637460 9637772 -243618811 + AluSq SINE Alu 1 312 -1 386 293 13 19 chr2 9638036 9638193 -243618390 + L1ME LINE L1 5273 5428 -2380 1024 125 82 86 chr2 9638202 9638243 -243618340 - MLT2B3 LTR ERVL 0 554 514 1788 166 17 39 chr2 9638243 9638599 -243617984 + MER7A DNA MER2_type 1 346 0 1024 125 82 86 chr2 9638599 9638789 -243617794 - MLT2B3 LTR ERVL -40 514 324 193 313 0 73 chr2 9638967 9639063 -243617520 + MIR SINE MIR 172 260 -2 269 318 11 0 chr2 9639131 9639219 -243617364 + L2 LINE L2 3183 3271 -1 217 264 41 58 chr2 9639466 9639587 -243616996 + L2 LINE L2 1580 1698 -1616 439 270 8 0 chr2 9639601 9639727 -243616856 + L2 LINE L2 2246 2372 -942 357 336 8 0 chr2 9639950 9640075 -243616508 + L1ME LINE L1 5596 5721 -449 831 271 44 4 chr2 9640246 9640497 -243616086 + MIR SINE MIR 2 262 0 324 244 61 0 chr2 9640584 9640666 -243615917 + MIR SINE MIR 96 182 -80 467 225 17 33 chr2 9640813 9640933 -243615650 - MIR3 SINE MIR -8 200 83 560 109 11 11 chr2 9641156 9641248 -243615335 + L1MA10 LINE L1 6234 6325 -9 1124 40 20 0 chr2 9641268 9641456 -243615127 + L1PA2 LINE L1 6002 6155 0 184 329 264 0 chr2 9641519 9641659 -243614924 - MIR SINE MIR -10 252 76 2016 116 36 7 chr2 9641743 9642046 -243614537 + AluJb SINE Alu 1 312 0 270 307 73 13 chr2 9642325 9642475 -243614108 - MIR3 SINE MIR -7 201 43 572 238 54 18 chr2 9642535 9642703 -243613880 + MER5B DNA MER1_type 5 178 0 2522 83 0 0 chr2 9642812 9643114 -243613469 - AluSx SINE Alu -10 302 1 321 329 37 30 chr2 9643403 9643567 -243613016 - MIR SINE MIR -78 184 20 271 270 167 24 chr2 9644351 9644477 -243612106 + MIR3 SINE MIR 18 161 -47 253 358 58 0 chr2 9644475 9644595 -243611988 + MIR3 SINE MIR 69 195 -13 * 1206 58 0 0 chr2 9645928 9646083 -243610500 + (TTCCC)n Simple_repeat Simple_repeat 3 157 0 2393 95 0 0 chr2 9646513 9646807 -243609776 + AluSx SINE Alu 1 294 -18 1839 164 0 14 chr2 9646858 9647144 -243609439 - AluJo SINE Alu -30 282 1 255 62 0 0 chr2 9647256 9647288 -243609295 - U2 snRNA snRNA -156 32 1 937 147 35 56 chr2 9647799 9647997 -243608586 - Tigger1 DNA MER2_type 0 2418 2225 1354 124 6 0 chr2 9648000 9648178 -243608405 + AluSx SINE Alu 1 179 -133 10851 128 32 35 chr2 9648181 9648362 -243608221 - Tigger1 DNA MER2_type -511 1907 1727 1533 187 29 0 chr2 9648362 9648672 -243607911 - L1PA16 LINE L1 0 6166 5848 10851 128 32 35 chr2 9648672 9649552 -243607031 - Tigger1 DNA MER2_type -691 1727 854 1726 115 186 14 chr2 9649552 9649917 -243606666 + MSTA LTR MaLR 1 428 0 10851 128 32 35 chr2 9649917 9650746 -243605837 - Tigger1 DNA MER2_type -1564 854 23 2491 58 19 22 chr2 9651266 9651579 -243605004 + AluSx SINE Alu 1 312 0 277 308 19 19 chr2 9651611 9651715 -243604868 - MIR3 SINE MIR -52 156 53 245 231 62 0 chr2 9652369 9652434 -243604149 + MER81 DNA DNA 46 114 0 876 228 113 48 chr2 9652458 9652769 -243603814 + MER58B DNA MER1_type 10 340 -1 1012 183 27 76 chr2 9653672 9653935 -243602648 - MLT1D LTR MaLR 0 505 256 211 316 0 0 chr2 9654842 9654921 -243601662 + (TG)n Simple_repeat Simple_repeat 1 79 0 251 366 0 0 chr2 9654988 9655100 -243601483 + (TG)n Simple_repeat Simple_repeat 1 112 0 478 335 12 0 chr2 9655488 9655661 -243600922 + (CAGAGA)n Simple_repeat Simple_repeat 5 179 0 241 333 62 14 chr2 9655723 9655867 -243600716 + MIR3 SINE MIR 35 185 -23 401 209 11 11 chr2 9656508 9656599 -243599984 - AluJ/FLAM SINE Alu -210 92 2 2691 49 0 0 chr2 9657067 9657372 -243599211 - AluY SINE Alu -6 305 1 560 271 98 5 chr2 9657463 9657677 -243598906 + L1MEd LINE L1 594 827 -5292 1863 164 6 31 chr2 9657693 9658011 -243598572 - AluJb SINE Alu -2 310 1 26 30 0 0 chr2 9658022 9658055 -243598528 + AT_rich Low_complexity Low_complexity 1 33 0 544 270 103 68 chr2 9658070 9658922 -243597661 + L1MEd LINE L1 852 1673 -4637 1974 143 28 0 chr2 9658922 9659209 -243597374 + AluJb SINE Alu 1 295 -17 544 270 103 68 chr2 9659209 9659386 -243597197 + L1MEd LINE L1 1673 1842 -4468 2087 144 0 0 chr2 9659386 9659684 -243596899 - AluSx SINE Alu -14 298 1 544 270 103 68 chr2 9659684 9660080 -243596503 + L1MEd LINE L1 1842 2345 -3965 24 0 0 0 chr2 9660164 9660188 -243596395 + AT_rich Low_complexity Low_complexity 1 24 0 333 316 67 84 chr2 9660541 9660898 -243595685 - L2 LINE L2 -20 3252 2902 684 187 169 21 chr2 9661606 9661973 -243594610 + LTR48 LTR ERV1 362 706 -1 1347 175 34 7 chr2 9661974 9662243 -243594340 - L1MB4 LINE L1 -317 5863 5588 475 157 122 68 chr2 9662412 9662559 -243594024 + MLT1B LTR MaLR 1 155 -235 360 194 15 0 chr2 9662562 9662629 -243593954 + MLT1B LTR MaLR 303 370 -4 1059 96 6 11 chr2 9663418 9663596 -243592987 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 264 189 144 33 chr2 9663912 9664002 -243592581 - MIR SINE MIR -69 139 40 1871 128 0 7 chr2 9665218 9665492 -243591091 - AluSx SINE Alu -2 310 39 280 283 71 20 chr2 9665692 9665791 -243590792 - MIR SINE MIR -117 145 42 1949 174 52 17 chr2 9666154 9666561 -243590022 + MLT1C LTR MaLR 3 423 -44 205 286 187 0 chr2 9666609 9666700 -243589883 + MIR SINE MIR 89 196 -66 277 195 52 13 chr2 9668081 9668158 -243588425 + MIR SINE MIR 69 148 -60 190 308 125 39 chr2 9668230 9668438 -243588145 + L2 LINE L2 3030 3255 -17 243 0 0 0 chr2 9668438 9668465 -243588118 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 231 286 36 0 chr2 9669166 9669250 -243587333 - MIR SINE MIR -78 130 44 428 303 37 21 chr2 9669721 9669909 -243586674 + MIR SINE MIR 2 192 -70 269 313 55 49 chr2 9670223 9670386 -243586197 - MIR SINE MIR -71 191 28 225 230 115 44 chr2 9672661 9672774 -243583809 + MER5A DNA MER1_type 67 187 -2 * 527 158 42 0 chr2 9672687 9672782 -243583801 - MER5A DNA MER1_type -82 107 9 428 272 29 58 chr2 9672786 9672959 -243583624 + MIR SINE MIR 20 187 -75 2158 146 39 62 chr2 9672969 9673048 -243583535 - Tigger2 DNA MER2_type 0 2718 2639 1798 157 0 7 chr2 9673048 9673341 -243583242 + AluJo SINE Alu 6 296 -16 2158 146 39 62 chr2 9673341 9673694 -243582889 - Tigger2 DNA MER2_type -79 2639 2296 274 140 263 0 chr2 9673716 9673773 -243582810 - Tigger2 DNA MER2_type -2646 72 1 242 289 72 26 chr2 9673839 9673991 -243582592 - L2 LINE L2 -529 2785 2627 193 269 29 58 chr2 9674249 9674353 -243582230 + L2 LINE L2 2996 3096 -176 302 359 0 0 chr2 9674353 9674470 -243582113 + (TG)n Simple_repeat Simple_repeat 1 117 0 531 353 14 14 chr2 9676384 9676605 -243579978 - L3 LINE CR1 -819 758 538 666 287 48 5 chr2 9677186 9677374 -243579209 - MER91A DNA MER1_type 0 196 1 255 385 42 6 chr2 9679252 9679418 -243577165 + L2 LINE L2 2564 2735 -579 312 285 0 36 chr2 9679418 9679555 -243577028 + CT-rich Low_complexity Low_complexity 3 134 0 213 270 40 50 chr2 9679556 9679656 -243576927 - L2 LINE L2 -19 3253 3155 541 131 39 1 chr2 9679792 9679942 -243576641 + L1MC1 LINE L1 6148 6341 -3 294 306 92 43 chr2 9679982 9680286 -243576297 + L2 LINE L2 2832 3150 -122 2535 150 55 5 chr2 9681449 9681888 -243574695 + MER65C LTR ERV1 1 461 0 207 358 32 0 chr2 9683211 9683306 -243573277 + L3 LINE CR1 1434 1531 -46 2588 147 22 15 chr2 9684056 9684473 -243572110 - MLT1C LTR MaLR -2 465 43 2302 169 8 13 chr2 9684473 9684863 -243571720 - MLT1B LTR MaLR 0 390 3 2588 147 22 15 chr2 9684863 9684907 -243571676 - MLT1C LTR MaLR -424 43 1 408 336 99 25 chr2 9684923 9685277 -243571306 - L2 LINE L2 -1 3271 2892 309 209 187 0 chr2 9685576 9685594 -243570989 - L1MA10 LINE L1 -3 6331 6314 400 257 184 0 chr2 9685594 9685812 -243570771 - L1ME2 LINE L1 -13 6151 5894 514 236 73 37 chr2 9685839 9686046 -243570537 - L1ME2 LINE L1 -569 5597 5384 243 0 0 0 chr2 9686956 9686983 -243569600 + (TG)n Simple_repeat Simple_repeat 2 28 0 328 290 186 41 chr2 9687705 9687990 -243568593 - L2 LINE L2 -270 3043 2801 2265 102 0 10 chr2 9687990 9688303 -243568280 + AluSg SINE Alu 1 310 0 328 290 186 41 chr2 9688303 9688470 -243568113 - L2 LINE L2 -512 2801 2519 884 236 15 0 chr2 9688488 9688683 -243567900 - MER20 DNA MER1_type -21 198 1 237 339 73 0 chr2 9688685 9688809 -243567774 - L2 LINE L2 -789 2525 2393 249 283 0 0 chr2 9689671 9689731 -243566852 - L2 LINE L2 -214 3058 2999 222 200 0 0 chr2 9689939 9689989 -243566594 - L2 LINE L2 0 3313 3264 * 916 231 39 21 chr2 9689958 9690192 -243566391 - MIR SINE MIR -13 249 12 211 369 99 19 chr2 9690670 9691085 -243565498 + L2 LINE L2 2456 2903 -411 296 309 91 30 chr2 9691356 9691521 -243565062 + MIR SINE MIR 55 229 -33 249 111 205 94 chr2 9691904 9691987 -243564596 - Charlie4 DNA MER1_type -7 1954 1853 1507 205 93 37 chr2 9691987 9692362 -243564221 - MSTD LTR MaLR 0 396 1 249 111 205 94 chr2 9692362 9692395 -243564188 - Charlie4 DNA MER1_type -108 1853 1825 747 203 38 0 chr2 9692397 9692530 -243564053 + FRAM SINE Alu 9 146 -30 234 0 0 0 chr2 9692532 9692558 -243564025 + (CATA)n Simple_repeat Simple_repeat 3 28 0 826 199 33 50 chr2 9692930 9693030 -243563553 + MER45A DNA AcHobo 1 98 -1483 1803 157 7 13 chr2 9693030 9693329 -243563254 - AluJb SINE Alu -15 297 1 826 199 33 50 chr2 9693329 9693409 -243563174 + MER45A DNA AcHobo 98 178 0 1175 240 118 48 chr2 9693919 9694377 -243562206 + MLT1F1 LTR MaLR 70 559 -8 675 179 0 7 chr2 9694746 9694922 -243561661 + AluJo SINE Alu 14 221 -91 367 322 122 6 chr2 9694926 9695106 -243561477 - MIR SINE MIR -27 235 35 701 304 45 20 chr2 9696257 9696504 -243560079 - MIR SINE MIR -1 261 9 1559 248 62 12 chr2 9696579 9697011 -243559572 - MLT1C LTR MaLR -8 459 6 2048 134 0 0 chr2 9697132 9697423 -243559160 + AluSp SINE Alu 1 291 -22 584 167 28 0 chr2 9697638 9697746 -243558837 + L1MB5 LINE L1 5815 5925 -249 224 272 0 65 chr2 9698394 9698563 -243558020 + C-rich Low_complexity Low_complexity 2 159 0 674 235 65 71 chr2 9698850 9699105 -243557478 - MIR SINE MIR 0 262 12 1446 282 54 9 chr2 9699119 9699580 -243557003 - MLT1L LTR MaLR -76 539 58 401 280 49 42 chr2 9699647 9699790 -243556793 - MIR SINE MIR -81 181 38 180 77 0 0 chr2 9700172 9700198 -243556385 + (T)n Simple_repeat Simple_repeat 1 26 0 519 31 0 0 chr2 9700217 9700282 -243556301 - AluY SINE Alu -244 66 2 1149 123 0 0 chr2 9700761 9700914 -243555669 + (CCCA)n Simple_repeat Simple_repeat 1 332 0 1149 123 0 0 chr2 9700914 9701093 -243555490 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 848 201 0 0 chr2 9701368 9701512 -243555071 - U4 snRNA snRNA -1 144 1 261 282 76 53 chr2 9702046 9702083 -243554500 + MIR SINE MIR 33 68 -194 2590 155 19 19 chr2 9702083 9702515 -243554068 + MSTB1 LTR MaLR 1 432 0 261 282 76 53 chr2 9702515 9702608 -243553975 + MIR SINE MIR 68 166 -96 2114 86 0 4 chr2 9703076 9703355 -243553228 + AluSq SINE Alu 25 302 -11 1732 133 21 7 chr2 9703748 9704033 -243552550 - AluSx SINE Alu -23 289 1 723 69 29 10 chr2 9704899 9705001 -243551582 - AluY SINE Alu 0 311 208 2197 92 3 13 chr2 9705695 9706000 -243550583 - AluSq SINE Alu -11 302 1 2330 171 22 10 chr2 9706000 9706349 -243550234 + MSTB LTR MaLR 6 362 -64 1705 114 15 11 chr2 9706349 9706611 -243549972 - AluSg SINE Alu -10 300 38 2330 171 22 10 chr2 9706611 9706677 -243549906 + MSTB LTR MaLR 362 426 0 2080 118 0 3 chr2 9708111 9708408 -243548175 - AluSx SINE Alu -3 309 14 253 169 0 51 chr2 9708849 9708908 -243547675 + L1MB2 LINE L1 6095 6150 -21 314 309 71 0 chr2 9708910 9708994 -243547589 + L1MC4 LINE L1 6614 6703 -1339 1756 123 42 11 chr2 9709121 9709405 -243547178 + AluSx SINE Alu 1 293 -19 2078 125 3 0 chr2 9710152 9710449 -243546134 + AluSx SINE Alu 3 300 -12 1061 127 58 0 chr2 9711278 9711467 -243545116 + AluSg/x SINE Alu 95 294 -18 1878 124 95 12 chr2 9711649 9711987 -243544596 + THE1C LTR MaLR 10 375 0 382 252 63 0 chr2 9711987 9712114 -243544469 - MIR SINE MIR -103 159 25 1181 129 46 28 chr2 9712957 9713174 -243543409 - L1PA15 LINE L1 -13 6152 5932 188 298 40 89 chr2 9713179 9713303 -243543280 + L2 LINE L2 3134 3251 -21 815 241 227 16 chr2 9713596 9713966 -243542617 - MLT1H1 LTR MaLR -62 493 46 315 238 49 112 chr2 9713972 9714115 -243542468 - MIR SINE MIR -108 154 21 1692 139 0 22 chr2 9714116 9714390 -243542193 + AluJo SINE Alu 1 268 -44 421 298 60 12 chr2 9714510 9714678 -243541905 - MER5B DNA MER1_type -2 176 1 469 202 48 90 chr2 9715015 9715203 -243541380 + L1M4 LINE L1 4408 4587 -1559 263 290 232 14 chr2 9715398 9715536 -243541047 + MER115 DNA AcHobo 218 385 -308 1041 240 43 0 chr2 9715577 9715810 -243540773 + MER115 DNA AcHobo 451 693 0 247 311 58 0 chr2 9715848 9715951 -243540632 + L2 LINE L2 2935 3043 -229 483 206 10 0 chr2 9716244 9716341 -243540242 - MER5A DNA MER1_type -80 109 12 225 320 13 0 chr2 9716603 9716681 -243539902 + MIR SINE MIR 44 122 -86 478 313 0 0 chr2 9716794 9716925 -243539658 - MIR SINE MIR -21 241 111 3359 149 15 11 chr2 9717013 9717542 -243539041 - LTR26B LTR ERV1 0 531 1 230 320 107 27 chr2 9717824 9717974 -243538609 + L2 LINE L2 3082 3243 -29 255 180 66 0 chr2 9718220 9718281 -243538302 + CT-rich Low_complexity Low_complexity 2 66 0 332 265 12 0 chr2 9718308 9718391 -243538192 + MIR SINE MIR 82 165 -97 512 30 15 0 chr2 9718677 9718743 -243537840 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 2148 92 7 29 chr2 9720373 9720679 -243535904 + AluSx SINE Alu 1 299 -13 1143 138 0 11 chr2 9721979 9722160 -243534423 - AluSp SINE Alu -1 312 134 2112 100 38 0 chr2 9722161 9722451 -243534132 - AluSq SINE Alu -10 303 3 1210 170 59 95 chr2 9722465 9722485 -243534098 + MLT1B LTR MaLR 1 20 -370 2190 178 3 11 chr2 9722485 9722851 -243533732 + MLT1A1 LTR MaLR 1 363 -2 1210 170 59 95 chr2 9722851 9723159 -243533424 + MLT1B LTR MaLR 20 313 -77 1058 172 91 5 chr2 9723185 9723406 -243533177 + MLT2C2 LTR ERVL 215 454 -10 212 0 0 35 chr2 9724090 9724119 -243532464 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 195 279 162 0 chr2 9724162 9724230 -243532353 + L2 LINE L2 2716 2794 -520 185 193 0 18 chr2 9727983 9728040 -243528543 + (CA)n Simple_repeat Simple_repeat 2 57 0 2073 84 39 0 chr2 9728699 9728983 -243527600 + AluSc SINE Alu 1 295 -14 213 39 0 0 chr2 9729129 9729155 -243527428 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1928 121 3 0 chr2 9729158 9729440 -243527143 - AluSx SINE Alu -29 283 1 887 265 90 15 chr2 9729761 9730173 -243526410 + MLT1C LTR MaLR 7 449 -18 2214 106 0 0 chr2 9730962 9731330 -243525253 + AluSq SINE Alu 1 368 0 231 114 0 0 chr2 9734514 9734549 -243522034 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 411 21 0 0 chr2 9734686 9734734 -243521849 + (TG)n Simple_repeat Simple_repeat 1 48 0 186 71 0 0 chr2 9734736 9734764 -243521819 + (GA)n Simple_repeat Simple_repeat 2 29 0 1658 98 0 45 chr2 9734777 9735022 -243521561 - AluSq SINE Alu -79 234 1 1586 188 24 3 chr2 9735215 9735507 -243521076 - AluJb SINE Alu -14 298 1 2059 95 0 7 chr2 9735590 9735874 -243520709 + AluSq SINE Alu 1 282 -31 1406 225 186 19 chr2 9735874 9736346 -243520237 + L1ME3A LINE L1 5592 6142 -28 406 256 47 16 chr2 9736439 9736568 -243520015 + MLT1J2 LTR MaLR 253 385 -65 198 103 0 0 chr2 9736603 9736632 -243519951 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 1041 224 103 38 chr2 9736765 9737162 -243519421 + L1MC4a LINE L1 5804 6226 -1582 313 123 92 15 chr2 9737194 9737259 -243519324 - MLT1C LTR MaLR -217 250 181 818 93 0 60 chr2 9737296 9737316 -243519267 - AluJo/FRAM SINE Alu 0 312 292 2792 16 0 0 chr2 9737316 9737634 -243518949 - AluYb8 SINE Alu 0 318 1 818 93 0 60 chr2 9737634 9737763 -243518820 - AluJo/FRAM SINE Alu -20 292 172 210 262 36 83 chr2 9738306 9738390 -243518193 - MIR SINE MIR -60 148 69 204 139 0 47 chr2 9738529 9738572 -243518011 + (CGGGGG)n Simple_repeat Simple_repeat 2 42 0 304 357 108 9 chr2 9738575 9738788 -243517795 + MIR SINE MIR 16 249 -13 253 208 57 0 chr2 9738994 9739047 -243517536 - MER2 DNA MER2_type -24 321 266 34 34 0 17 chr2 9739047 9739077 -243517506 + AT_rich Low_complexity Low_complexity 1 31 -27 2277 86 0 3 chr2 9739077 9739380 -243517203 - AluSq SINE Alu -5 308 7 34 34 0 17 chr2 9739380 9739408 -243517175 + AT_rich Low_complexity Low_complexity 31 58 0 1511 176 10 19 chr2 9739408 9739715 -243516868 + AluSx SINE Alu 1 304 -8 1372 137 5 0 chr2 9739729 9739933 -243516650 - MER2 DNA MER2_type -139 206 2 850 136 73 12 chr2 9739984 9740154 -243516429 + MSTC LTR MaLR 2 167 -229 262 315 110 16 chr2 9740599 9740726 -243515857 - MIR3 SINE MIR -6 202 64 2138 108 0 22 chr2 9740842 9741156 -243515427 - AluSx SINE Alu -5 307 1 374 280 50 0 chr2 9741248 9741348 -243515235 - MIR SINE MIR -41 221 117 2393 88 0 0 chr2 9741571 9741879 -243514704 + AluSx SINE Alu 1 308 -4 1913 102 47 0 chr2 9741934 9742209 -243514374 + AluSq SINE Alu 1 288 -25 303 28 0 0 chr2 9742212 9742248 -243514335 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 301 253 42 21 chr2 9742678 9742773 -243513810 + MIR SINE MIR 52 148 -60 21 0 0 0 chr2 9743566 9743587 -243512996 + AT_rich Low_complexity Low_complexity 1 21 0 425 288 101 42 chr2 9743828 9743979 -243512604 - L1ME4a LINE L1 -4 6117 5976 2266 110 0 0 chr2 9743979 9744289 -243512294 - AluSg SINE Alu 0 310 1 425 288 101 42 chr2 9744289 9744425 -243512158 - L1ME4a LINE L1 -145 5976 5813 285 75 0 0 chr2 9744841 9744881 -243511702 + (TC)n Simple_repeat Simple_repeat 2 41 0 204 40 0 0 chr2 9744881 9744906 -243511677 + (CA)n Simple_repeat Simple_repeat 1 25 0 2998 205 55 40 chr2 9744918 9745145 -243511438 + L1ME1 LINE L1 4415 4637 -1529 738 179 7 57 chr2 9745145 9745285 -243511298 + FLAM_C SINE Alu 1 133 0 2998 205 55 40 chr2 9745285 9745915 -243510668 + L1ME1 LINE L1 4637 5299 -867 2127 114 10 0 chr2 9745915 9746214 -243510369 + AluSx SINE Alu 1 302 -10 2998 205 55 40 chr2 9746214 9746502 -243510081 + L1ME1 LINE L1 5299 5581 -585 1719 127 6 74 chr2 9746509 9746832 -243509751 + AluJo SINE Alu 6 306 -6 512 183 16 0 chr2 9746851 9746977 -243509606 + GA-rich Low_complexity Low_complexity 3 130 0 1480 229 89 4 chr2 9746977 9747479 -243509104 + L1ME1 LINE L1 5567 6155 -11 204 174 130 0 chr2 9747674 9747720 -243508863 - L2 LINE L2 -1072 2242 2191 558 266 128 63 chr2 9747767 9748289 -243508294 - HAL1 LINE L1 -229 2278 1723 2097 97 4 0 chr2 9748289 9748605 -243507978 - AluSg SINE Alu 0 317 1 270 252 109 25 chr2 9748938 9749057 -243507526 + MIR SINE MIR 16 144 -64 437 283 58 52 chr2 9749668 9749859 -243506724 - MIR SINE MIR -50 212 21 2103 261 220 10 chr2 9750114 9751135 -243505448 + L2 LINE L2 1560 2795 -519 23 33 0 0 chr2 9751204 9751234 -243505349 + AT_rich Low_complexity Low_complexity 1 30 0 2194 112 0 0 chr2 9751286 9751590 -243504993 + AluSx SINE Alu 1 304 -8 6950 118 23 23 chr2 9751684 9752744 -243503839 + L1MA2 LINE L1 4342 5411 -893 1995 99 3 11 chr2 9752744 9753048 -243503535 + AluSc SINE Alu 1 302 0 6950 118 23 23 chr2 9753048 9753942 -243502641 + L1MA2 LINE L1 5411 6304 0 283 278 211 23 chr2 9754427 9754560 -243502023 + MIR SINE MIR 105 262 0 2259 101 3 0 chr2 9755189 9755496 -243501087 - AluSx SINE Alu -4 308 1 1818 249 94 50 chr2 9755730 9756021 -243500562 + Charlie7 DNA MER1_type 984 1261 -1351 2501 50 0 0 chr2 9756021 9756323 -243500260 + AluY SINE Alu 1 302 -9 1818 249 94 50 chr2 9756323 9756789 -243499794 + Charlie7 DNA MER1_type 1261 1774 -838 781 221 181 18 chr2 9756810 9757136 -243499447 + L2 LINE L2 1202 1580 -1734 871 120 8 23 chr2 9757140 9757273 -243499310 - THE1B LTR MaLR 0 364 234 318 227 6 3 chr2 9757272 9757337 -243499246 - AluJ/monomer SINE Alu -249 53 1 * 1376 276 56 26 chr2 9757338 9757550 -243499033 - L1P LINE L1 -743 5403 5199 1592 173 20 7 chr2 9757550 9757850 -243498733 - AluJo SINE Alu -8 304 1 1376 276 56 26 chr2 9757850 9758135 -243498448 - L1P LINE L1 -947 5199 4888 1779 149 3 23 chr2 9758135 9758437 -243498146 + AluSx SINE Alu 15 310 -2 1376 276 56 26 chr2 9758437 9758579 -243498004 - L1P LINE L1 -1258 4888 4752 1330 185 49 28 chr2 9758623 9758909 -243497674 - AluJb SINE Alu 0 312 21 792 229 6 113 chr2 9758912 9759193 -243497390 - L1M4 LINE L1 -2310 3836 3593 1764 149 3 14 chr2 9759193 9759488 -243497095 - AluSx SINE Alu -3 309 18 792 229 6 113 chr2 9759488 9759533 -243497050 - L1M4 LINE L1 -2553 3593 3545 1888 121 36 0 chr2 9759534 9759815 -243496768 + AluSg SINE Alu 1 291 -19 325 268 0 0 chr2 9759822 9759904 -243496679 - L1M4 LINE L1 -2761 3385 3304 692 203 62 0 chr2 9759954 9760082 -243496501 - FRAM SINE Alu -41 135 1 232 241 36 0 chr2 9760083 9760166 -243496417 - L1M4 LINE L1 -2884 3262 3177 1905 105 0 0 chr2 9760185 9760442 -243496141 + AluSx SINE Alu 1 257 -55 578 205 0 8 chr2 9760442 9760553 -243496030 - AluSq/x SINE Alu -195 118 9 744 301 60 25 chr2 9760681 9760963 -243495620 + L2 LINE L2 3021 3312 -1 664 117 63 0 chr2 9761044 9761155 -243495428 - FLAM_C SINE Alu -23 120 3 211 277 161 9 chr2 9761177 9761289 -243495294 - MIR3 SINE MIR -69 139 11 1705 150 3 26 chr2 9762334 9762641 -243493942 - AluJo SINE Alu -12 300 1 337 242 33 44 chr2 9762892 9762983 -243493600 + L2 LINE L2 3183 3272 0 2101 108 3 3 chr2 9763884 9764181 -243492402 + AluSx SINE Alu 1 297 -15 200 267 208 10 chr2 9764314 9764415 -243492168 - MIR3 SINE MIR -85 123 3 478 178 0 11 chr2 9764697 9764787 -243491796 + L1MEc LINE L1 35 123 -6273 633 289 73 34 chr2 9764794 9765175 -243491408 - Charlie1a DNA MER1_type -964 491 96 289 214 155 0 chr2 9765940 9766024 -243490559 - L1ME4a LINE L1 -3 6118 6022 2196 100 3 0 chr2 9766568 9766867 -243489716 + AluSp SINE Alu 1 300 -13 226 238 88 25 chr2 9767307 9767387 -243489196 - L2 LINE L2 -2 3311 3227 21 0 0 0 chr2 9768190 9768211 -243488372 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 9768211 9768240 -243488343 + (TG)n Simple_repeat Simple_repeat 2 30 0 194 271 21 0 chr2 9768488 9768536 -243488047 + MIR SINE MIR 101 149 -113 199 347 14 0 chr2 9768999 9769071 -243487512 + MIR SINE MIR 161 233 -29 913 207 35 0 chr2 9770265 9770439 -243486144 - MER5A DNA MER1_type 0 189 10 1811 159 0 0 chr2 9770680 9770975 -243485608 - AluSx SINE Alu -17 295 1 306 301 147 44 chr2 9771455 9771591 -243484992 + MIR SINE MIR 25 174 -88 1731 165 26 3 chr2 9771641 9771944 -243484639 - AluJb SINE Alu -2 310 1 293 333 93 13 chr2 9771978 9772128 -243484455 + MIR3 SINE MIR 30 191 -17 380 115 0 0 chr2 9772227 9772279 -243484304 + MER5A DNA MER1_type 138 189 0 29 28 0 0 chr2 9772903 9772939 -243483644 + AT_rich Low_complexity Low_complexity 1 36 0 186 268 0 0 chr2 9772976 9773017 -243483566 + L2 LINE L2 3007 3047 -225 2238 99 0 6 chr2 9773164 9773478 -243483105 - AluSq SINE Alu -1 312 1 2006 127 19 61 chr2 9773504 9773592 -243482991 - MER47A DNA MER2_type -1957 366 276 1849 149 7 21 chr2 9773592 9773880 -243482703 + AluJo SINE Alu 13 296 -16 2006 127 19 61 chr2 9773880 9774153 -243482430 - MER47A DNA MER2_type -2047 276 20 272 267 110 27 chr2 9775220 9775366 -243481217 - L2 LINE L2 -188 3125 2968 254 211 239 55 chr2 9775363 9775472 -243481111 + MER5A DNA MER1_type 61 189 0 * 1701 189 116 193 chr2 9775472 9775744 -243480839 - L2 LINE L2 -702 2612 2320 1651 150 44 78 chr2 9775744 9776130 -243480453 - THE1C LTR MaLR -2 373 1 9746 115 19 46 chr2 9776130 9777570 -243479013 - THE1C-int LTR MaLR 0 1580 189 1928 161 7 3 chr2 9777570 9777869 -243478714 - AluSx SINE Alu -12 300 1 9746 115 19 46 chr2 9777869 9778051 -243478532 - THE1C-int LTR MaLR -1391 189 3 1908 126 60 30 chr2 9778053 9778417 -243478166 - THE1C LTR MaLR 0 375 1 1701 189 116 193 chr2 9778417 9778525 -243478058 - L2 LINE L2 -994 2320 2205 659 193 0 7 chr2 9778525 9778665 -243477918 - MER104 DNA Tc2 -7 173 35 1701 189 116 193 chr2 9778665 9779142 -243477441 - L2 LINE L2 -1109 2205 1688 41965 40 3 1 chr2 9779146 9785277 -243471306 + L1PA4 LINE L1 2 6149 -6 792 241 67 22 chr2 9785277 9785547 -243471036 - L2 LINE L2 -1612 1702 1421 210 333 12 12 chr2 9786637 9786721 -243469862 - MIR3 SINE MIR -16 192 109 2218 110 0 0 chr2 9787381 9787705 -243468878 - AluSg SINE Alu 0 324 1 2114 120 14 0 chr2 9787776 9788067 -243468516 + AluSx SINE Alu 1 295 -17 35 88 0 0 chr2 9788217 9788308 -243468275 + AT_rich Low_complexity Low_complexity 1 91 0 1630 170 14 14 chr2 9788395 9788683 -243467900 + AluJb SINE Alu 9 296 -16 1029 231 128 79 chr2 9788713 9789257 -243467326 - HAL1 LINE L1 -110 2397 1814 2316 94 0 10 chr2 9789257 9789564 -243467019 - AluY SINE Alu -7 304 1 1029 231 128 79 chr2 9789564 9789678 -243466905 - HAL1 LINE L1 -693 1814 1707 2136 255 83 45 chr2 9789722 9790228 -243466355 - HAL1 LINE L1 -1604 903 349 2219 113 3 0 chr2 9790228 9790528 -243466055 + AluY SINE Alu 1 301 -10 2136 255 83 45 chr2 9790528 9790891 -243465692 - HAL1 LINE L1 -2158 349 1 410 184 8 5 chr2 9790987 9791119 -243465464 - MER5A DNA MER1_type 0 189 1 337 296 81 6 chr2 9791147 9791319 -243465264 - L1ME LINE L1 -317 5804 5620 505 228 101 7 chr2 9791337 9791486 -243465097 - L2 LINE L2 -32 3281 3119 1998 274 72 32 chr2 9791550 9792263 -243464320 + L2 LINE L2 2120 2860 -454 461 86 0 14 chr2 9792277 9792347 -243464236 - THE1B LTR MaLR -53 311 243 844 231 156 60 chr2 9792383 9792626 -243463957 + L2 LINE L2 2871 3089 -224 758 173 16 0 chr2 9792626 9792753 -243463830 - FLAM_A SINE Alu -4 129 1 844 231 156 60 chr2 9792753 9792912 -243463671 + L2 LINE L2 3089 3312 -1 2142 112 20 20 chr2 9793141 9793446 -243463137 - AluSx SINE Alu -7 305 1 2544 113 6 6 chr2 9793590 9793954 -243462629 - THE1B LTR MaLR 0 364 1 183 286 162 32 chr2 9794356 9794510 -243462073 + MIR SINE MIR 89 262 0 1004 232 46 13 chr2 9794859 9795096 -243461487 + MIR SINE MIR 18 262 0 1083 299 84 32 chr2 9795312 9795838 -243460745 + L2 LINE L2 2174 2726 -588 218 189 0 19 chr2 9796003 9796056 -243460527 + CT-rich Low_complexity Low_complexity 1 52 0 777 224 13 13 chr2 9796241 9796397 -243460186 + MER5A DNA MER1_type 6 161 -28 652 166 14 90 chr2 9796425 9796570 -243460013 - AluJo SINE Alu -178 134 1 206 205 0 0 chr2 9796570 9796609 -243459974 + MER5A DNA MER1_type 151 189 0 864 300 84 33 chr2 9796829 9796982 -243459601 - L2 LINE L2 -2 3311 3167 366 83 250 0 chr2 9796982 9797042 -243459541 - MADE1 DNA Mariner -3 77 3 864 300 84 33 chr2 9797042 9797219 -243459364 - L2 LINE L2 -146 3167 3000 2547 200 33 13 chr2 9797219 9797758 -243458825 - MER44D DNA MER2_type 0 605 1 864 300 84 33 chr2 9797758 9797942 -243458641 - L2 LINE L2 -313 3000 2776 541 182 53 28 chr2 9797943 9798093 -243458490 - L1ME2 LINE L1 0 6165 6020 708 221 121 26 chr2 9798111 9798345 -243458238 - L2 LINE L2 -550 2764 2505 181 306 94 24 chr2 9798345 9798430 -243458153 - MER5C DNA MER1_type 0 324 234 225 0 0 0 chr2 9798609 9798634 -243457949 + (T)n Simple_repeat Simple_repeat 1 25 0 2076 125 7 14 chr2 9799234 9799530 -243457053 + AluSx SINE Alu 1 294 -18 692 258 44 18 chr2 9799701 9799926 -243456657 + L2 LINE L2 3083 3313 0 183 322 128 35 chr2 9800004 9800231 -243456352 - L2 LINE L2 -47 3225 2978 2119 79 23 0 chr2 9800292 9800558 -243456025 - AluSg SINE Alu -16 294 23 325 286 0 0 chr2 9800559 9800636 -243455947 - FLAM_A SINE Alu -50 83 7 21 0 0 0 chr2 9801131 9801152 -243455431 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 9801285 9801306 -243455277 + AT_rich Low_complexity Low_complexity 1 21 0 4459 172 29 14 chr2 9802064 9802951 -243453632 - MER52A LTR ERV1 0 1755 881 347 171 0 80 chr2 9802949 9803037 -243453546 + MER52A LTR ERV1 125 205 -1550 * 265 316 51 35 chr2 9803338 9803539 -243453044 + MIR SINE MIR 32 230 -32 402 291 29 0 chr2 9804120 9804223 -243452360 - MIR3 SINE MIR -6 202 97 274 119 0 0 chr2 9804478 9804520 -243452063 - tRNA-Cys-TGC tRNA tRNA -31 44 3 2364 83 0 0 chr2 9804967 9805257 -243451326 + AluSc SINE Alu 1 290 -19 1468 217 70 9 chr2 9805499 9806016 -243450567 - L1MEc LINE L1 -3563 2652 2141 1113 179 21 56 chr2 9806018 9806252 -243450331 - AluJo SINE Alu 0 312 87 4282 264 89 21 chr2 9806252 9806973 -243449610 - L1MEc LINE L1 -4248 2148 1478 2321 103 6 3 chr2 9806973 9807285 -243449298 - AluSq SINE Alu 0 313 1 4282 264 89 21 chr2 9807285 9808543 -243448040 - L1MEc LINE L1 -4918 1478 34 3367 145 104 17 chr2 9808800 9808956 -243447627 - L1MA7 LINE L1 -2 6289 6148 2267 94 0 3 chr2 9808956 9809254 -243447329 - AluSp SINE Alu -16 297 1 3367 145 104 17 chr2 9809254 9809281 -243447302 - L1MA7 LINE L1 -143 6148 6125 4141 168 56 92 chr2 9809281 9810557 -243446026 + Tigger3b DNA MER2_type 1 1230 -1 3367 145 104 17 chr2 9810557 9811123 -243445460 - L1MA7 LINE L1 -166 6125 5474 440 203 4 144 chr2 9811281 9811517 -243445066 - L1MC4 LINE L1 -3 8039 7837 453 241 46 18 chr2 9811554 9811725 -243444858 + L1ME3 LINE L1 5721 5895 -284 1013 128 7 7 chr2 9811725 9811874 -243444709 + AluJb SINE Alu 137 285 -27 302 338 85 52 chr2 9811876 9812148 -243444435 + L1ME3A LINE L1 5860 6140 -30 2093 134 0 3 chr2 9813400 9813699 -243442884 + AluJb SINE Alu 1 298 -14 207 0 0 0 chr2 9813996 9814019 -243442564 + (T)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr2 9814803 9814825 -243441758 + (A)n Simple_repeat Simple_repeat 1 22 0 490 272 83 18 chr2 9816361 9816530 -243440053 - MER5A DNA MER1_type -1 188 9 2123 154 25 18 chr2 9817173 9817570 -243439013 - L1MB3 LINE L1 0 6183 5784 901 185 100 0 chr2 9817643 9817843 -243438740 - L1MB3 LINE L1 -392 5791 5572 314 255 121 25 chr2 9817849 9818006 -243438577 - L1ME4a LINE L1 -1 6120 5949 226 315 27 27 chr2 9818010 9818156 -243438427 - L1ME4a LINE L1 -196 5925 5780 325 276 105 13 chr2 9818157 9818309 -243438274 + L1ME4a LINE L1 5738 5903 -218 374 314 189 30 chr2 9818369 9818434 -243438149 - L2 LINE L2 -561 2753 2700 1967 167 0 6 chr2 9818434 9818745 -243437838 + AluJb SINE Alu 1 309 -3 374 314 189 30 chr2 9818745 9819086 -243437497 - L2 LINE L2 -614 2700 2282 307 250 76 8 chr2 9819123 9819255 -243437328 + L1ME4a LINE L1 5974 6114 -7 271 225 0 50 chr2 9819270 9819367 -243437216 + L1ME4a LINE L1 5692 5771 -350 21 36 0 0 chr2 9819437 9819465 -243437118 + AT_rich Low_complexity Low_complexity 1 28 0 1753 235 56 43 chr2 9820420 9821025 -243435558 - L1ME3A LINE L1 0 6170 5558 2314 57 0 3 chr2 9821262 9821568 -243435015 - AluY SINE Alu 0 305 1 4328 116 49 1 chr2 9822295 9822970 -243433613 - L1PA15 LINE L1 0 6165 5459 24 0 0 0 chr2 9824035 9824059 -243432524 + AT_rich Low_complexity Low_complexity 1 24 0 321 306 65 51 chr2 9824646 9824862 -243431721 + L1MC1 LINE L1 5679 5897 -436 263 244 79 8 chr2 9824908 9825035 -243431548 + L1ME4a LINE L1 5968 6103 -18 1745 177 0 37 chr2 9825071 9825370 -243431213 - AluJo SINE Alu -24 288 1 226 220 44 132 chr2 9826010 9826101 -243430482 - MIR SINE MIR -111 97 15 2353 80 0 6 chr2 9826216 9826529 -243430054 - AluY SINE Alu 0 311 1 296 191 0 0 chr2 9826774 9826821 -243429762 + L2 LINE L2 3218 3264 -8 240 240 0 0 chr2 9827109 9827159 -243429424 + L2 LINE L2 3263 3312 -1 262 253 32 121 chr2 9827543 9827733 -243428850 - L2 LINE L2 -230 3042 2870 1033 224 18 23 chr2 9827878 9828097 -243428486 - MIR SINE MIR -40 222 5 399 203 98 41 chr2 9828305 9828428 -243428155 - MIR SINE MIR -63 145 28 234 266 8 113 chr2 9830047 9830171 -243426412 + L2 LINE L2 2926 3036 -236 266 282 14 0 chr2 9830320 9830391 -243426192 + MIR SINE MIR 183 254 -8 282 293 41 49 chr2 9830404 9830527 -243426056 + L2 LINE L2 3151 3272 0 215 373 0 0 chr2 9830685 9830744 -243425839 + L3 LINE CR1 1504 1562 -15 539 208 0 0 chr2 9831588 9831694 -243424889 - L1MD3 LINE L1 -158 7837 7732 338 263 25 24 chr2 9831966 9832080 -243424503 + MIR SINE MIR 9 130 -78 283 109 91 0 chr2 9833348 9833403 -243423180 - L1MC/D LINE L1 -897 5462 5403 2900 214 110 10 chr2 9833417 9834406 -243422177 + L1ME1 LINE L1 5072 6158 -8 2130 98 6 28 chr2 9835011 9835328 -243421255 - AluSp SINE Alu -3 310 1 221 296 56 0 chr2 9835643 9835697 -243420886 - L2 LINE L2 -13 3300 3244 222 330 97 10 chr2 9835825 9835928 -243420655 - L2 LINE L2 -2 3270 3159 199 236 135 67 chr2 9835930 9835973 -243420610 - MIR3 SINE MIR -105 103 64 2680 10 0 0 chr2 9835973 9836272 -243420311 + AluYa5 SINE Alu 1 299 -12 199 236 135 67 chr2 9836272 9836317 -243420266 - MIR3 SINE MIR -144 64 9 473 228 0 78 chr2 9837602 9837782 -243418801 - L1MC3 LINE L1 -72 7713 7548 1689 242 82 50 chr2 9838306 9838942 -243417641 - L1MC4 LINE L1 -162 7880 7225 1736 149 4 4 chr2 9839299 9839574 -243417009 - AluJo SINE Alu -37 275 1 207 250 175 25 chr2 9840068 9840148 -243416435 + MIR3 SINE MIR 76 167 -41 315 345 61 20 chr2 9840270 9840418 -243416165 + MIR SINE MIR 12 165 -97 * 1457 224 49 75 chr2 9840413 9841001 -243415582 + L2 LINE L2 2726 3313 0 242 198 229 62 chr2 9841005 9841101 -243415482 + MIR SINE MIR 151 262 0 1940 120 24 0 chr2 9841147 9841439 -243415144 + AluSx SINE Alu 3 301 -11 2329 68 3 3 chr2 9841579 9841875 -243414708 + AluSp SINE Alu 1 296 -17 35 24 0 0 chr2 9843277 9843319 -243413264 + AT_rich Low_complexity Low_complexity 1 42 0 2268 72 7 0 chr2 9843342 9843634 -243412949 + AluY SINE Alu 1 294 -17 302 207 207 12 chr2 9843636 9843718 -243412865 - MIR SINE MIR -100 162 65 204 191 0 32 chr2 9843719 9843782 -243412801 + T-rich Low_complexity Low_complexity 1 61 0 635 303 61 39 chr2 9844185 9844597 -243411986 + L1MEc LINE L1 778 1198 -5940 917 207 66 4 chr2 9844753 9844976 -243411607 - L1ME1 LINE L1 0 6178 5948 520 286 46 14 chr2 9845000 9845261 -243411322 + L1MEc LINE L1 1331 1467 -5392 2085 113 0 0 chr2 9845261 9845553 -243411030 + AluSx SINE Alu 1 292 -20 520 286 46 14 chr2 9845553 9845580 -243411003 + L1MEc LINE L1 1467 1492 -5367 2082 118 7 0 chr2 9845941 9846228 -243410355 - AluSx SINE Alu -23 289 1 715 295 106 12 chr2 9846403 9846725 -243409858 - L1ME1 LINE L1 -234 5887 5536 201 279 0 40 chr2 9847570 9847873 -243408710 + (CGGG)n Simple_repeat Simple_repeat 1 290 0 426 317 0 28 chr2 9848031 9848211 -243408372 + (CGGG)n Simple_repeat Simple_repeat 4 178 0 360 344 0 32 chr2 9848226 9848412 -243408171 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 289 333 0 32 chr2 9848487 9848673 -243407910 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 440 324 0 27 chr2 9848876 9849061 -243407522 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 279 359 0 28 chr2 9849161 9849342 -243407241 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 383 352 0 29 chr2 9849666 9850132 -243406451 + (CGGG)n Simple_repeat Simple_repeat 1 452 0 439 323 0 28 chr2 9850161 9850532 -243406051 + (CGGG)n Simple_repeat Simple_repeat 1 360 0 308 344 0 27 chr2 9850555 9850738 -243405845 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 240 356 0 28 chr2 9850707 9850887 -243405696 + (CGGG)n Simple_repeat Simple_repeat 2 176 0 * 2167 104 0 13 chr2 9851245 9851544 -243405039 - AluSq SINE Alu -17 296 2 462 341 75 6 chr2 9852347 9852520 -243404063 + MIR SINE MIR 21 205 -57 231 367 37 18 chr2 9852587 9852696 -243403887 - L2 LINE L2 -21 3251 3141 325 236 176 23 chr2 9852736 9852907 -243403676 - MIR SINE MIR -31 231 34 188 270 167 16 chr2 9853444 9853570 -243403013 - L2 LINE L2 -173 3099 2955 346 301 0 0 chr2 9853616 9853699 -243402884 - MIR SINE MIR -95 113 31 638 273 94 88 chr2 9853885 9854126 -243402457 + L1MC4a LINE L1 5374 5612 -2196 2035 122 0 0 chr2 9854126 9854422 -243402161 + AluSq SINE Alu 9 304 -9 638 273 94 88 chr2 9854422 9854851 -243401732 + L1MC4a LINE L1 5612 6048 -1760 2147 103 7 0 chr2 9854929 9855229 -243401354 - AluSx SINE Alu -9 303 2 1660 159 37 10 chr2 9855312 9855437 -243401146 + AluJb SINE Alu 1 121 -191 192 77 0 0 chr2 9855437 9855463 -243401120 + (CA)n Simple_repeat Simple_repeat 2 27 0 1660 159 37 10 chr2 9855463 9855633 -243400950 + AluJb SINE Alu 121 304 -8 459 293 110 62 chr2 9855971 9856261 -243400322 - L2 LINE L2 -3 3269 2966 280 244 56 0 chr2 9856454 9856544 -243400039 + MER113 DNA MER1_type? 7 101 -420 2243 106 0 0 chr2 9856572 9856883 -243399700 + AluSx SINE Alu 1 311 -1 1881 245 179 15 chr2 9857100 9857901 -243398682 + L2 LINE L2 2002 2933 -381 225 308 133 8 chr2 9857982 9858102 -243398481 + L2 LINE L2 3136 3270 -43 25 0 0 0 chr2 9858207 9858232 -243398351 + GC_rich Low_complexity Low_complexity 1 25 0 230 274 16 65 chr2 9858509 9858695 -243397888 + G-rich Low_complexity Low_complexity 4 180 0 24 0 0 0 chr2 9859198 9859222 -243397361 + GC_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 9859267 9859298 -243397285 + GC_rich Low_complexity Low_complexity 1 31 0 306 220 114 53 chr2 9859921 9860053 -243396530 + L1MD3 LINE L1 7856 7995 0 303 271 19 0 chr2 9863447 9863554 -243393029 - L1MC4 LINE L1 0 8042 7934 1068 148 13 91 chr2 9863636 9863866 -243392717 + AluJb SINE Alu 83 294 -18 1532 188 40 13 chr2 9864316 9864619 -243391964 - AluJo SINE Alu -1 311 1 2239 78 0 7 chr2 9864742 9865037 -243391546 - AluSc SINE Alu -16 293 1 1675 146 7 29 chr2 9865491 9865799 -243390784 - AluJb SINE Alu -1 311 11 226 252 81 27 chr2 9866961 9867072 -243389511 - L1MC5 LINE L1 -54 7907 7791 2289 96 0 0 chr2 9867485 9867797 -243388786 + AluSq SINE Alu 1 312 -1 675 255 192 5 chr2 9867843 9868051 -243388532 - MIR SINE MIR 0 262 16 185 216 81 0 chr2 9870134 9870171 -243386412 + MIR3 SINE MIR 139 178 -30 995 169 22 38 chr2 9870511 9870694 -243385889 - MER58A DNA MER1_type -1 223 44 395 340 33 0 chr2 9872302 9872455 -243384128 + MIR3 SINE MIR 44 201 -7 274 304 81 31 chr2 9872914 9873124 -243383459 + MIR SINE MIR 44 262 0 2125 112 0 13 chr2 9873444 9873749 -243382834 + AluSx SINE Alu 1 301 -11 260 95 0 0 chr2 9875221 9875263 -243381320 - L1MA6 LINE L1 -4 6296 6255 194 211 0 26 chr2 9876579 9876617 -243379966 - L2 LINE L2 -25 3247 3211 2433 53 0 3 chr2 9877171 9877471 -243379112 - AluY SINE Alu -12 299 1 268 293 10 30 chr2 9881428 9881527 -243375056 + MIR3 SINE MIR 2 98 -110 211 267 152 19 chr2 9882104 9882209 -243374374 - L2 LINE L2 0 3313 3195 1966 128 0 28 chr2 9882923 9883243 -243373340 + AluSq SINE Alu 1 311 -2 473 189 57 9 chr2 9883249 9883355 -243373228 + MIR SINE MIR 78 188 -74 2036 112 0 7 chr2 9884654 9884948 -243371635 - AluSx SINE Alu -20 292 1 2358 100 39 30 chr2 9885156 9885517 -243371066 - THE1B LTR MaLR 0 364 1 2207 92 0 0 chr2 9886033 9886327 -243370256 + AluSq SINE Alu 1 294 -19 1217 89 48 0 chr2 9886329 9886497 -243370086 + AluSg/x SINE Alu 126 301 -9 1587 126 4 16 chr2 9886558 9886812 -243369771 - AluJo SINE Alu -10 302 52 566 236 185 34 chr2 9888799 9888977 -243367606 + MER58A DNA MER1_type 5 209 -15 185 314 229 0 chr2 9889082 9889187 -243367396 - L2 LINE L2 -5 3267 3139 395 204 31 122 chr2 9889668 9889864 -243366719 + MER5B DNA MER1_type 1 178 0 669 191 107 6 chr2 9889876 9890044 -243366539 - MER5A DNA MER1_type -4 185 1 2084 87 10 27 chr2 9891199 9891498 -243365085 + AluSq SINE Alu 1 294 -19 1747 158 7 20 chr2 9892104 9892407 -243364176 + AluJb SINE Alu 1 299 -13 1865 123 3 3 chr2 9893735 9894042 -243362541 - AluSx SINE Alu 0 307 1 1331 197 0 4 chr2 9894049 9894298 -243362285 - AluJb SINE Alu -30 282 35 1858 134 24 3 chr2 9894307 9894597 -243361986 - AluSx SINE Alu -16 296 1 1586 260 65 88 chr2 9895426 9896199 -243360384 - L1MEc LINE L1 -5605 791 37 2044 114 10 7 chr2 9896875 9897174 -243359409 - AluSx SINE Alu -12 300 1 2232 90 3 7 chr2 9897474 9897775 -243358808 - AluSq SINE Alu -13 300 1 21 0 0 0 chr2 9899307 9899328 -243357255 + AT_rich Low_complexity Low_complexity 1 21 0 690 306 5 5 chr2 9900155 9900354 -243356229 - MER58A DNA MER1_type 0 224 26 189 0 0 0 chr2 9900579 9900600 -243355983 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 280 180 0 0 chr2 9900607 9900657 -243355926 - L1MC4 LINE L1 -10 8032 7983 1765 234 158 1 chr2 9900658 9901331 -243355252 - L1MC4 LINE L1 -142 7900 6974 963 182 0 0 chr2 9901459 9901635 -243354948 - FRAM SINE Alu -2 174 1 378 0 0 0 chr2 9901635 9901677 -243354906 + (TTA)n Simple_repeat Simple_repeat 2 43 0 239 146 0 0 chr2 9901679 9901720 -243354863 - Alu SINE Alu -240 80 40 1691 140 48 24 chr2 9902634 9902926 -243353657 + AluJb SINE Alu 1 299 -13 262 300 108 23 chr2 9902965 9903095 -243353488 + MIR3 SINE MIR 22 162 -46 495 281 79 35 chr2 9904462 9904690 -243351893 - L2 LINE L2 -4 3309 3072 2233 81 13 3 chr2 9904864 9905173 -243351410 + AluSx SINE Alu 1 312 0 225 0 0 0 chr2 9905749 9905774 -243350809 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1011 161 0 0 chr2 9905773 9905953 -243350630 + (TA)n Simple_repeat Simple_repeat 1 180 0 239 172 62 0 chr2 9905958 9906022 -243350561 - L1MC4 LINE L1 -1339 6703 6636 207 170 43 0 chr2 9906953 9907000 -243349583 + T-rich Low_complexity Low_complexity 4 52 0 1616 188 0 7 chr2 9907102 9907390 -243349193 - AluJo SINE Alu -14 298 13 703 276 35 43 chr2 9907431 9907663 -243348920 - MIR SINE MIR 0 262 33 27 0 0 0 chr2 9908526 9908553 -243348030 + AT_rich Low_complexity Low_complexity 1 27 0 240 320 72 0 chr2 9910179 9910276 -243346307 + L2 LINE L2 3163 3266 -6 581 288 81 0 chr2 9910462 9910622 -243345961 + L2 LINE L2 2598 2770 -544 905 289 48 38 chr2 9910906 9911300 -243345283 + ERVL LTR ERVL 2572 2969 -2795 470 305 5 63 chr2 9911303 9911526 -243345057 + L2 LINE L2 3077 3286 -27 375 274 41 20 chr2 9911769 9911915 -243344668 + LTR33 LTR ERVL 373 521 0 366 193 181 0 chr2 9911986 9912069 -243344514 + LTR33 LTR ERVL 2 99 -422 741 140 171 49 chr2 9912103 9912267 -243344316 + MLT2B2 LTR ERVL 320 503 -12 1188 223 34 10 chr2 9912278 9912634 -243343949 + ERVL LTR ERVL 6 394 -5288 4630 104 20 40 chr2 9912681 9913383 -243343200 - LTR12 LTR ERV1 0 688 1 708 219 45 52 chr2 9913566 9913854 -243342729 - pTR5 LTR ERV1 -1410 1028 743 1289 161 135 15 chr2 9914325 9914464 -243342119 - AluJo SINE Alu -10 292 171 321 26 0 0 chr2 9914464 9914502 -243342081 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1289 161 135 15 chr2 9914502 9914622 -243341961 - AluJo SINE Alu -131 171 2 3351 242 53 41 chr2 9914871 9915900 -243340683 - L1M4 LINE L1 -5274 1268 227 826 239 78 58 chr2 9915900 9916260 -243340323 + L1ME2 LINE L1 5789 6155 -9 477 297 0 32 chr2 9917671 9917856 -243338727 + (CGGG)n Simple_repeat Simple_repeat 2 180 0 394 341 0 30 chr2 9917874 9918684 -243337899 + (CGGG)n Simple_repeat Simple_repeat 1 785 0 390 306 0 38 chr2 9918739 9918922 -243337661 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 484 280 0 33 chr2 9919034 9919216 -243337367 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 440 340 0 27 chr2 9919246 9919656 -243336927 + (CGGG)n Simple_repeat Simple_repeat 1 398 0 383 333 0 27 chr2 9919632 9919815 -243336768 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 * 250 374 0 25 chr2 9919849 9920012 -243336571 + (CGGG)n Simple_repeat Simple_repeat 2 160 0 225 0 0 0 chr2 9920667 9920692 -243335891 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1011 161 0 0 chr2 9920691 9920871 -243335712 + (TA)n Simple_repeat Simple_repeat 1 180 0 226 133 0 0 chr2 9920896 9920941 -243335642 - LTR66 LTR ERVL -171 439 395 345 304 0 22 chr2 9920942 9921034 -243335549 + L1MC4 LINE L1 6614 6703 -1339 412 188 1 79 chr2 9921042 9921152 -243335431 - L1MC4 LINE L1 -1339 6983 1988 1990 125 17 0 chr2 9921656 9921945 -243334638 - AluSg SINE Alu -16 294 1 765 233 43 70 chr2 9922049 9922616 -243333967 - L1MC5 LINE L1 -30 7931 7331 1848 87 128 0 chr2 9922627 9922893 -243333690 + AluSx SINE Alu 1 300 -12 255 158 0 70 chr2 9922896 9922953 -243333630 - L1MC5 LINE L1 -610 7351 7299 * 23726 70 16 9 chr2 9922945 9925214 -243331369 - L1PA6 LINE L1 -2 6152 3901 288 0 0 0 chr2 9925214 9925246 -243331337 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2143 82 0 0 chr2 9925248 9925529 -243331054 - AluY SINE Alu -30 281 1 23726 70 16 9 chr2 9925529 9929356 -243327227 - L1PA6 LINE L1 -2253 3901 12 255 250 0 83 chr2 9930351 9930459 -243326124 + L1P LINE L1 4951 5049 -1097 296 291 112 24 chr2 9930527 9930612 -243325971 + L1ME1 LINE L1 5255 5331 -2477 2646 56 0 0 chr2 9930612 9930918 -243325665 + AluY SINE Alu 1 306 -5 296 291 112 24 chr2 9930918 9931038 -243325545 + L1ME1 LINE L1 5331 5478 -2330 803 287 95 31 chr2 9931092 9931704 -243324879 - L2 LINE L2 0 3313 2656 1894 151 26 3 chr2 9931798 9932102 -243324481 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 9932111 9932132 -243324451 + AT_rich Low_complexity Low_complexity 1 21 0 2429 55 17 0 chr2 9932137 9932428 -243324155 - AluY SINE Alu -15 296 1 791 164 0 22 chr2 9932673 9932807 -243323776 - FLAM_C SINE Alu -2 131 1 1399 181 8 17 chr2 9932807 9933099 -243323484 + L1ME1 LINE L1 5575 5856 -312 690 178 55 7 chr2 9933864 9934010 -243322573 + MER5A DNA MER1_type 1 153 -36 2072 126 0 10 chr2 9934629 9934923 -243321660 + AluSx SINE Alu 5 295 -17 186 71 0 0 chr2 9936873 9936901 -243319682 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 362 293 149 14 chr2 9937495 9937710 -243318873 - MIR SINE MIR -4 258 15 205 356 30 10 chr2 9938274 9938375 -243318208 + L2 LINE L2 2900 3002 -270 2298 81 0 33 chr2 9939187 9939494 -243317089 + AluSx SINE Alu 1 297 -15 203 358 46 18 chr2 9990385 9990494 -243266089 - MER5A DNA MER1_type -30 159 48 298 297 0 0 chr2 9990539 9990613 -243265970 - MER5B DNA MER1_type 0 178 105 180 0 0 0 chr2 9991129 9991149 -243265434 + (T)n Simple_repeat Simple_repeat 1 20 0 2222 84 30 0 chr2 9991322 9991618 -243264965 + AluSq SINE Alu 1 305 -8 355 280 37 112 chr2 9992053 9992267 -243264316 + L1MEd LINE L1 867 1064 -5055 487 195 46 0 chr2 9992647 9992734 -243263849 + 7SLRNA srpRNA srpRNA 1 91 -229 1488 173 14 25 chr2 9993923 9994207 -243262376 + AluJo SINE Alu 11 291 -21 309 316 65 7 chr2 9994334 9994489 -243262094 + MLT1K LTR MaLR 357 520 -68 241 319 64 0 chr2 9994542 9994636 -243261947 - MIR SINE MIR -68 194 95 1904 131 7 13 chr2 9995423 9995593 -243260990 - AluSx SINE Alu -9 303 134 2222 97 3 0 chr2 9995593 9995892 -243260691 - AluSp SINE Alu -13 300 1 1904 131 7 13 chr2 9995892 9996026 -243260557 - AluSx SINE Alu -178 134 1 242 311 59 17 chr2 9996069 9996188 -243260395 + MIR SINE MIR 73 196 -66 549 241 45 75 chr2 9996208 9996251 -243260332 - L1MB8 LINE L1 -27 6151 6108 2136 106 7 0 chr2 9996251 9996543 -243260040 + AluSx SINE Alu 1 294 -18 549 241 45 75 chr2 9996543 9996698 -243259885 - L1MB8 LINE L1 -70 6108 5959 814 216 154 10 chr2 9997297 9997392 -243259191 + MER58 DNA MER1_type 1 81 -260 2268 87 3 6 chr2 9997392 9997703 -243258880 + AluY SINE Alu 1 310 -1 814 216 154 10 chr2 9997703 9997815 -243258768 + MER58 DNA MER1_type 81 238 -103 199 346 59 10 chr2 9998614 9998715 -243257868 + MIR3 SINE MIR 13 118 -90 207 0 0 0 chr2 9999203 9999226 -243257357 + (CTGGGG)n Simple_repeat Simple_repeat 2 24 0 374 289 209 13 chr2 9999236 9999841 -243256742 - L2 LINE L2 -9 3304 2564 2119 98 0 0 chr2 10000288 10000598 -243255985 - AluY SINE Alu 0 311 1 493 291 126 54 chr2 10000607 10000957 -243255626 + L2 LINE L2 2896 3270 -2 2247 79 10 0 chr2 10001100 10001391 -243255192 - AluSc SINE Alu -15 294 1 224 175 16 32 chr2 10002479 10002542 -243254041 + GA-rich Low_complexity Low_complexity 1 62 0 260 313 0 49 chr2 10002823 10002967 -243253616 + MER112 DNA MER1_type 118 254 -6 440 286 16 8 chr2 10003570 10003696 -243252887 - MIR SINE MIR -121 141 15 349 274 20 20 chr2 10003764 10003866 -243252717 + MER5B DNA MER1_type 77 178 0 2134 105 13 0 chr2 10004372 10004676 -243251907 - AluSc SINE Alu -1 308 1 1495 144 83 11 chr2 10004700 10004989 -243251594 - AluJo SINE Alu 0 308 1 474 222 0 0 chr2 10005000 10005081 -243251502 - AluJ/FLAM SINE Alu -228 84 4 903 281 106 59 chr2 10005252 10005288 -243251295 - HAL1b LINE L1 -461 887 854 2236 113 3 0 chr2 10005288 10005599 -243250984 + AluSx SINE Alu 1 312 0 903 281 106 59 chr2 10005599 10006346 -243250237 - HAL1b LINE L1 -494 854 67 2132 117 0 0 chr2 10006555 10006854 -243249729 - AluSx SINE Alu -13 299 1 888 129 0 0 chr2 10007457 10007589 -243248994 + AluSq/x SINE Alu 1 132 -181 2206 97 3 0 chr2 10007591 10007890 -243248693 + AluY SINE Alu 1 300 -11 2453 232 68 55 chr2 10007951 10008242 -243248341 - L1ME1 LINE L1 -5 6161 5875 2222 88 7 3 chr2 10008242 10008538 -243248045 - AluSq SINE Alu -16 297 1 2453 232 68 55 chr2 10008538 10008721 -243247862 - L1ME1 LINE L1 -291 5875 5696 2091 106 3 13 chr2 10008721 10009023 -243247560 - AluSg SINE Alu -11 299 1 2453 232 68 55 chr2 10009023 10009363 -243247220 - L1ME1 LINE L1 -470 5696 5322 2322 90 0 0 chr2 10009363 10009673 -243246910 - AluY SINE Alu -1 310 1 2453 232 68 55 chr2 10009673 10009898 -243246685 - L1ME1 LINE L1 -844 5322 5101 1889 154 20 0 chr2 10009902 10010208 -243246375 - AluSx SINE Alu 0 312 1 1182 148 118 4 chr2 10010238 10010475 -243246108 + L1M2 LINE L1 5509 5772 -540 2044 129 0 7 chr2 10010475 10010769 -243245814 + AluSx SINE Alu 1 292 -20 323 208 57 9 chr2 10010794 10010900 -243245683 - L1ME1 LINE L1 -1095 5051 4941 1045 196 30 4 chr2 10011256 10011491 -243245092 + L1MB4 LINE L1 5940 6180 0 2014 101 0 80 chr2 10011617 10011943 -243244640 + AluSx SINE Alu 1 300 -12 2373 66 3 3 chr2 10012114 10012419 -243244164 - AluSp SINE Alu -6 307 3 1396 74 133 0 chr2 10013562 10013765 -243242818 + MER30 DNA MER1_type 1 230 0 186 43 0 0 chr2 10014064 10014087 -243242496 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1566 149 18 21 chr2 10014088 10014369 -243242214 - AluJb SINE Alu -32 280 1 2410 73 0 6 chr2 10014438 10014755 -243241828 - AluYb8 SINE Alu -3 315 1 1113 263 77 27 chr2 10014762 10015203 -243241380 - L1ME3A LINE L1 -6 6164 5702 189 178 0 0 chr2 10015374 10015419 -243241164 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 341 338 47 27 chr2 10015463 10015611 -243240972 - MIR SINE MIR -15 247 97 262 267 130 8 chr2 10015601 10015732 -243240851 + MIR SINE MIR 96 242 -20 * 190 261 43 0 chr2 10015767 10015813 -243240770 - MIR SINE MIR -174 88 41 306 232 14 0 chr2 10017047 10017116 -243239467 + MER103 DNA DNA 17 86 -80 1811 146 34 3 chr2 10018488 10018783 -243237800 - AluJb SINE Alu -8 304 1 381 206 0 0 chr2 10019021 10019123 -243237460 + (CA)n Simple_repeat Simple_repeat 1 102 0 253 311 61 2 chr2 10019200 10019319 -243237264 - MIR SINE MIR -56 152 28 274 276 92 10 chr2 10019793 10019891 -243236692 + MIR SINE MIR 11 116 -146 346 266 37 0 chr2 10020125 10020234 -243236349 + MIR3 SINE MIR 44 156 -52 338 136 15 30 chr2 10020919 10020985 -243235598 + MIR SINE MIR 81 145 -63 257 314 99 8 chr2 10021231 10021352 -243235231 + MIR SINE MIR 28 159 -103 417 190 0 0 chr2 10021427 10021527 -243235056 + (TG)n Simple_repeat Simple_repeat 1 100 0 418 262 160 27 chr2 10021637 10021862 -243234721 + MIR SINE MIR 8 262 0 1506 154 4 0 chr2 10022435 10022675 -243233908 - AluJb SINE Alu -71 241 1 191 329 150 7 chr2 10023092 10023232 -243233351 + L3 LINE CR1 1138 1297 -280 259 289 168 13 chr2 10023974 10024123 -243232460 - MIR SINE MIR -70 192 21 257 333 23 0 chr2 10024589 10024676 -243231907 + L2 LINE L2 3182 3270 -2 1185 160 14 89 chr2 10025476 10025757 -243230826 + MER31A LTR ERV1 216 475 -10 1830 139 13 30 chr2 10026399 10026702 -243229881 - AluJb SINE Alu -14 298 1 333 342 9 0 chr2 10029230 10029341 -243227242 - L2 LINE L2 -22 3291 3180 206 208 43 86 chr2 10029529 10029643 -243226940 + MIR SINE MIR 14 120 -88 693 217 14 0 chr2 10030177 10030320 -243226263 - MER45A DNA AcHobo -31 147 3 621 228 70 6 chr2 10030462 10030620 -243225963 + MIR SINE MIR 23 190 -72 1028 240 89 12 chr2 10031390 10031719 -243224864 + MLT1A2 LTR MaLR 3 450 -17 1746 147 40 17 chr2 10032015 10032315 -243224268 + AluJo SINE Alu 1 307 -5 277 239 11 11 chr2 10032489 10032502 -243224081 - L1MA10 LINE L1 -1 6333 6321 1744 227 37 64 chr2 10032502 10032789 -243223794 - L1ME3 LINE L1 -4 6158 5865 3214 147 18 72 chr2 10032789 10033024 -243223559 - L1MB3 LINE L1 -7 6176 5930 1921 124 3 29 chr2 10033024 10033330 -243223253 - AluSx SINE Alu -14 298 1 3214 147 18 72 chr2 10033330 10033695 -243222888 - L1MB3 LINE L1 -253 5930 5613 2326 66 3 0 chr2 10033695 10033983 -243222600 - AluSp SINE Alu -15 298 10 3214 147 18 72 chr2 10033983 10034048 -243222535 - L1MB3 LINE L1 -570 5613 5546 1744 227 37 64 chr2 10034048 10034350 -243222233 - L1ME3 LINE L1 -297 5865 5585 2056 121 0 0 chr2 10034388 10034717 -243221866 + AluSx SINE Alu 1 329 0 229 197 66 0 chr2 10034724 10034785 -243221798 - L1ME LINE L1 -205 5916 5852 * 991 266 80 17 chr2 10034781 10035130 -243221453 - L1MD2 LINE L1 -2 6357 5987 240 163 0 0 chr2 10035131 10035174 -243221409 + CT-rich Low_complexity Low_complexity 1 43 0 1159 143 0 0 chr2 10035174 10035342 -243221241 - AluSx SINE Alu -140 172 5 2346 54 0 17 chr2 10035346 10035644 -243220939 - AluY SINE Alu -12 299 7 2148 127 0 0 chr2 10035648 10035947 -243220636 - AluSx SINE Alu -13 299 1 1368 236 58 42 chr2 10035977 10036134 -243220449 - L1MD2 LINE L1 -365 5994 5841 2125 184 17 0 chr2 10036134 10036493 -243220090 + MLT1A1 LTR MaLR 1 365 0 1368 236 58 42 chr2 10036493 10036575 -243220008 - L1MD2 LINE L1 -518 5841 5762 2120 107 7 0 chr2 10036575 10036875 -243219708 - AluSx SINE Alu -10 302 1 1368 236 58 42 chr2 10036875 10037016 -243219567 - L1MD2 LINE L1 -597 5762 5607 319 289 0 12 chr2 10037026 10037109 -243219474 - Tigger5 DNA MER2_type 0 2323 2242 * 580 176 0 4 chr2 10037085 10037225 -243219358 - Tigger5 DNA MER2_type -2129 194 3 210 37 0 0 chr2 10038178 10038205 -243218378 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2006 121 3 0 chr2 10038209 10038491 -243218092 - AluSx SINE Alu -29 283 1 555 245 41 0 chr2 10038565 10038712 -243217871 - MIR SINE MIR -43 219 67 527 202 110 140 chr2 10038754 10038962 -243217621 - L1M4 LINE L1 -2884 3262 3049 226 125 100 0 chr2 10038962 10039002 -243217581 - Alu SINE Alu -195 107 64 * 259 114 0 0 chr2 10038970 10039005 -243217578 - AluJ/FLAM SINE Alu -207 95 61 * 527 202 110 140 chr2 10039002 10039126 -243217457 - L1M4 LINE L1 -3097 3049 2902 1896 153 0 6 chr2 10039177 10039490 -243217093 - AluJo SINE Alu -1 311 1 1434 117 0 61 chr2 10039555 10039828 -243216755 + AluSg/x SINE Alu 76 312 0 355 163 12 75 chr2 10039847 10039927 -243216656 + MLT1E2 LTR MaLR 393 626 0 694 161 0 9 chr2 10039965 10040077 -243216506 + FLAM_A SINE Alu 25 135 -7 1793 151 27 3 chr2 10040320 10040619 -243215964 + AluJo SINE Alu 1 306 -6 614 133 0 14 chr2 10040992 10041232 -243215351 + AluSx SINE Alu 1 294 -18 2381 70 0 13 chr2 10041232 10041545 -243215038 + AluY SINE Alu 1 309 -2 343 200 8 144 chr2 10041818 10041943 -243214640 - MER81 DNA DNA 0 114 7 226 291 58 0 chr2 10042198 10042284 -243214299 - MIR3 SINE MIR -27 181 91 193 292 14 56 chr2 10042313 10042385 -243214198 + MIR3 SINE MIR 4 72 -136 255 150 0 0 chr2 10042660 10042720 -243213863 + (GA)n Simple_repeat Simple_repeat 2 61 0 205 262 12 48 chr2 10043127 10043211 -243213372 + C-rich Low_complexity Low_complexity 1 81 0 328 282 0 13 chr2 10043570 10043648 -243212935 + MIR3 SINE MIR 81 157 -51 1513 72 0 43 chr2 10043671 10043879 -243212704 - AluSc SINE Alu -110 199 1 298 313 87 33 chr2 10044030 10044180 -243212403 + MIR SINE MIR 105 262 0 196 268 56 14 chr2 10045068 10045139 -243211444 + MIR SINE MIR 111 184 -78 868 196 16 37 chr2 10045305 10045494 -243211089 + MER5A DNA MER1_type 5 189 0 1364 226 36 33 chr2 10045669 10046031 -243210552 - MLT1B LTR MaLR -11 379 17 181 290 224 28 chr2 10046484 10046591 -243209992 - MIR SINE MIR -115 147 20 268 336 80 0 chr2 10047066 10047191 -243209392 + MIR SINE MIR 79 213 -49 310 330 52 0 chr2 10047220 10047317 -243209266 + L2 LINE L2 3159 3260 -12 844 142 17 17 chr2 10047355 10047531 -243209052 + (ATGGTG)n Simple_repeat Simple_repeat 1 176 0 954 157 0 0 chr2 10047540 10047718 -243208865 + (TGG)n Simple_repeat Simple_repeat 3 180 0 704 148 11 28 chr2 10047736 10047912 -243208671 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 725 184 0 17 chr2 10047946 10048120 -243208463 + (ATGGTG)n Simple_repeat Simple_repeat 3 173 0 487 209 0 37 chr2 10048157 10048320 -243208263 + (ATGGTG)n Simple_repeat Simple_repeat 4 160 0 244 246 15 15 chr2 10048703 10048768 -243207815 + MIR SINE MIR 56 120 -142 308 314 81 0 chr2 10050583 10050707 -243205876 + LTR33 LTR ERVL 45 178 -343 311 348 35 0 chr2 10050823 10050964 -243205619 + LTR33 LTR ERVL 344 489 -32 1297 165 4 17 chr2 10055830 10056067 -243200516 - AluJb SINE Alu -15 297 64 1508 168 10 1 chr2 10056067 10056465 -243200118 - LTR19A LTR ERV1 -6 480 1 917 134 6 0 chr2 10056465 10056641 -243199942 - HERVFH19I LTR ERV1 0 7719 4796 * 8347 178 50 42 chr2 10056640 10056924 -243199659 - HERVFH19I LTR ERV1 -283 5417 5137 2458 71 3 0 chr2 10056924 10057234 -243199349 + AluY SINE Alu 1 311 0 8347 178 50 42 chr2 10057234 10057267 -243199316 - HERVFH19I LTR ERV1 -563 5137 5106 2015 131 3 0 chr2 10057267 10057557 -243199026 - AluSq SINE Alu -22 291 1 8347 178 50 42 chr2 10057557 10058289 -243198294 - HERVFH19I LTR ERV1 -594 5106 4382 2171 118 0 6 chr2 10058289 10058603 -243197980 + AluSx SINE Alu 1 312 0 8347 178 50 42 chr2 10058603 10059746 -243196837 - HERVFH19I LTR ERV1 -1318 4382 2865 2749 118 98 0 chr2 10059805 10060246 -243196337 - LTR19A LTR ERV1 0 486 3 480 151 0 0 chr2 10060248 10060321 -243196262 - AluJ/FLAM SINE Alu -238 74 2 645 229 42 31 chr2 10060698 10060890 -243195693 + MIR SINE MIR 14 207 -55 2049 108 0 7 chr2 10060893 10061181 -243195402 + AluSg SINE Alu 1 286 -24 237 33 0 0 chr2 10061181 10061211 -243195372 + (CATA)n Simple_repeat Simple_repeat 2 31 0 259 216 21 52 chr2 10061449 10061546 -243195037 + LTR67 LTR ERVL 442 535 -22 393 288 36 7 chr2 10061677 10061816 -243194767 - L2 LINE L2 -181 3091 2949 2082 125 0 3 chr2 10063104 10063417 -243193166 - AluSx SINE Alu 0 312 1 2077 77 0 0 chr2 10063426 10063687 -243192896 + AluY SINE Alu 38 298 -13 554 256 54 22 chr2 10063687 10063910 -243192673 + L1ME2 LINE L1 5598 5827 -337 362 310 152 17 chr2 10063917 10064399 -243192184 + L1MEc LINE L1 1150 1664 -4551 573 330 86 23 chr2 10064468 10065167 -243191416 + L2 LINE L2 2313 3080 -192 1993 156 0 6 chr2 10066468 10066782 -243189801 - AluSx SINE Alu 0 312 1 399 127 0 0 chr2 10067000 10067063 -243189520 + (TG)n Simple_repeat Simple_repeat 2 64 0 1515 180 171 3 chr2 10068150 10068466 -243188117 + MLT1A2 LTR MaLR 3 371 -3 1568 261 105 10 chr2 10068468 10068873 -243187710 + L1ME3A LINE L1 4929 5294 -868 1960 147 0 0 chr2 10068873 10069172 -243187411 + AluSx SINE Alu 1 299 -13 1568 261 105 10 chr2 10069172 10069339 -243187244 + L1ME3A LINE L1 5294 5444 -718 2865 147 20 29 chr2 10069339 10069828 -243186755 + MER66B LTR ERV1 2 486 0 1568 261 105 10 chr2 10069828 10070099 -243186484 + L1ME3A LINE L1 5444 5853 -309 1795 166 13 0 chr2 10070158 10070466 -243186117 + AluJb SINE Alu 1 312 0 515 182 42 7 chr2 10070468 10070611 -243185972 + GA-rich Low_complexity Low_complexity 3 150 0 202 74 0 0 chr2 10070621 10070648 -243185935 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 2085 128 0 3 chr2 10070662 10070968 -243185615 + AluJb SINE Alu 1 305 -7 375 241 147 9 chr2 10070972 10071088 -243185495 + L1ME3A LINE L1 5976 6107 -63 502 83 48 36 chr2 10071094 10071163 -243185420 + LTR5 LTR ERVK 1 73 -896 2096 77 4 4 chr2 10071163 10071437 -243185146 - AluSp SINE Alu -39 274 1 502 83 48 36 chr2 10071437 10071451 -243185132 + LTR5 LTR ERVK 73 85 -884 409 21 0 0 chr2 10071451 10071499 -243185084 + AluSp/q SINE Alu 218 265 -38 600 88 0 0 chr2 10071499 10071579 -243185004 - LTR5 LTR ERVK -889 80 1 561 215 67 0 chr2 10071581 10071730 -243184853 - MER97b DNA MER1_type? -380 673 515 292 268 0 24 chr2 10071896 10071978 -243184605 - MER115 DNA AcHobo -613 80 1 1649 142 49 17 chr2 10072319 10072607 -243183976 - AluJo SINE Alu -9 303 7 193 324 59 0 chr2 10073028 10073096 -243183487 + MIR SINE MIR 81 152 -110 702 248 12 6 chr2 10073259 10073420 -243183163 + MER103 DNA DNA 3 164 -2 224 59 29 0 chr2 10073424 10073458 -243183125 + (TG)n Simple_repeat Simple_repeat 1 35 0 742 74 44 15 chr2 10073475 10073610 -243182973 + GA-rich Low_complexity Low_complexity 2 140 0 473 321 77 6 chr2 10076050 10076218 -243180365 - MIR SINE MIR -48 214 35 925 243 74 42 chr2 10076309 10076646 -243179937 + MLT1A1 LTR MaLR 1 348 -17 427 258 121 0 chr2 10076671 10076795 -243179788 - MIR SINE MIR -102 160 22 2484 51 0 13 chr2 10076964 10077276 -243179307 - AluY SINE Alu -3 308 1 3474 178 22 46 chr2 10077770 10078527 -243178056 + L1MB3 LINE L1 5417 6155 -28 3993 87 20 14 chr2 10080142 10080693 -243175890 + MER41A LTR ERV1 1 554 0 1362 211 111 75 chr2 10082089 10082469 -243174114 + MLT1C LTR MaLR 1 401 -66 1890 98 62 0 chr2 10082469 10082745 -243173838 - AluSx SINE Alu -19 293 1 1362 211 111 75 chr2 10082745 10082815 -243173768 + MLT1C LTR MaLR 401 467 0 520 242 43 12 chr2 10084120 10084281 -243172302 - MLT1F LTR MaLR -7 535 370 1488 154 68 39 chr2 10084444 10084724 -243171859 + AluJo SINE Alu 2 289 -23 2334 70 13 3 chr2 10085184 10085485 -243171098 - AluY SINE Alu -7 304 1 580 293 55 6 chr2 10085953 10086117 -243170466 + MER5B DNA MER1_type 2 173 -5 1790 161 3 3 chr2 10087495 10087787 -243168796 - AluJb SINE Alu -20 292 1 435 276 69 35 chr2 10087945 10088148 -243168435 + MLT1J2 LTR MaLR 240 449 -1 251 253 63 63 chr2 10088152 10088247 -243168336 + MIR SINE MIR 162 256 -6 293 251 30 133 chr2 10088449 10088509 -243168074 - MLT1K LTR MaLR 0 588 523 2136 112 0 28 chr2 10088509 10088831 -243167752 + AluSq SINE Alu 1 313 0 293 251 30 133 chr2 10088831 10088973 -243167610 - MLT1K LTR MaLR -65 523 407 319 322 202 8 chr2 10089479 10089737 -243166846 + L3 LINE CR1 1163 1470 -107 2113 89 0 92 chr2 10090234 10090572 -243166011 + AluSc SINE Alu 3 309 0 378 280 0 0 chr2 10090616 10090748 -243165835 + (TG)n Simple_repeat Simple_repeat 1 132 0 228 257 0 0 chr2 10090751 10090864 -243165719 + (TGAG)n Simple_repeat Simple_repeat 4 116 0 389 222 20 6 chr2 10090897 10091245 -243165338 + (TG)n Simple_repeat Simple_repeat 1 353 0 285 262 30 30 chr2 10091245 10091409 -243165174 + (TGAG)n Simple_repeat Simple_repeat 3 166 0 215 326 116 0 chr2 10092617 10092746 -243163837 + MIR SINE MIR 104 247 -15 391 304 9 7 chr2 10092767 10092894 -243163689 + MIR SINE MIR 16 138 -70 180 295 95 11 chr2 10093228 10093323 -243163260 - MIR SINE MIR -63 145 43 299 313 50 0 chr2 10095876 10095975 -243160608 - MIR3 SINE MIR -42 166 63 1825 162 14 0 chr2 10096162 10096452 -243160131 - AluJb SINE Alu -18 294 1 304 293 41 41 chr2 10099395 10099518 -243157065 + MIR3 SINE MIR 64 186 -22 256 344 0 22 chr2 10100207 10100297 -243156286 + MIR SINE MIR 174 261 -1 189 242 97 0 chr2 10101028 10101090 -243155493 - MIR SINE MIR -87 121 54 394 335 147 12 chr2 10101174 10101617 -243154966 + L2 LINE L2 2551 3053 -260 1870 261 60 7 chr2 10101727 10102262 -243154321 - L1MD1 LINE L1 -86 6262 5709 1280 344 203 19 chr2 10102263 10103773 -243152810 - L2 LINE L2 -605 2709 922 1407 164 23 34 chr2 10103785 10104048 -243152535 + AluJb SINE Alu 15 274 -38 306 263 20 10 chr2 10104073 10104172 -243152411 + L1MEd LINE L1 46 145 -5974 830 296 47 58 chr2 10104392 10105053 -243151530 + L1MEd LINE L1 602 1255 -4864 29 60 0 0 chr2 10105117 10105167 -243151416 + AT_rich Low_complexity Low_complexity 1 50 0 564 42 0 0 chr2 10105175 10105246 -243151337 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 502 256 31 6 chr2 10105397 10105557 -243151026 + L1ME LINE L1 5389 5552 -610 6656 216 31 29 chr2 10105574 10105707 -243150876 - L1MD1 LINE L1 -769 5377 5246 2108 111 3 7 chr2 10105707 10106005 -243150578 + AluSg SINE Alu 14 310 0 6656 216 31 29 chr2 10106005 10107827 -243148756 - L1MD1 LINE L1 -900 5246 3419 352 336 0 0 chr2 10107846 10107977 -243148606 - L2 LINE L2 -2382 932 802 247 390 138 8 chr2 10107986 10108240 -243148343 + L2 LINE L2 2978 3264 -8 551 225 61 56 chr2 10108257 10108470 -243148113 - HAL1 LINE L1 -695 1812 1599 416 326 14 35 chr2 10108476 10108620 -243147963 - HAL1 LINE L1 -977 1530 1390 238 146 0 83 chr2 10108632 10108680 -243147903 - MER5A DNA MER1_type 0 189 146 230 98 0 49 chr2 10108683 10108724 -243147859 - MER5A DNA MER1_type -150 39 1 367 293 65 78 chr2 10108749 10109043 -243147540 - L1MC5 LINE L1 -199 7762 7473 1581 193 16 16 chr2 10109043 10109383 -243147200 - AluJo SINE Alu 0 342 3 797 254 119 28 chr2 10109394 10109831 -243146752 - HAL1 LINE L1 -1253 1254 778 191 146 24 0 chr2 10109831 10109872 -243146711 + (TG)n Simple_repeat Simple_repeat 1 42 0 231 250 36 88 chr2 10109875 10110067 -243146516 - HAL1 LINE L1 -1723 784 603 347 269 82 106 chr2 10110115 10110371 -243146212 - HAL1 LINE L1 -1987 520 271 2309 93 3 3 chr2 10110455 10110768 -243145815 - AluSq SINE Alu 0 313 1 332 225 0 0 chr2 10112001 10112072 -243144511 - MER53 DNA DNA -2 187 117 306 209 77 0 chr2 10112012 10112103 -243144480 + MER53 DNA DNA 24 121 -68 * 342 279 42 21 chr2 10112738 10112892 -243143691 - MIR SINE MIR -63 145 3 261 57 0 0 chr2 10114821 10114856 -243141727 + (CA)n Simple_repeat Simple_repeat 1 35 0 199 195 0 0 chr2 10116211 10116252 -243140331 - L2 LINE L2 0 3313 3273 242 305 34 68 chr2 10116270 10116388 -243140195 + MER81 DNA DNA 1 114 0 2309 105 0 0 chr2 10116491 10116797 -243139786 - AluSx SINE Alu -6 306 1 338 322 57 48 chr2 10117252 10117479 -243139104 - MIR SINE MIR -3 259 31 1451 113 0 0 chr2 10118154 10118358 -243138225 + AluSg/x SINE Alu 107 310 0 2439 149 29 0 chr2 10118650 10119059 -243137524 - MSTC LTR MaLR 0 428 8 2045 142 7 0 chr2 10119153 10119456 -243137127 - AluSx SINE Alu -7 305 1 726 295 101 47 chr2 10119790 10120217 -243136366 - MLT1J2 LTR MaLR 0 450 1 261 344 116 31 chr2 10120430 10120654 -243135929 - L2 LINE L2 -487 2827 2585 3938 45 0 14 chr2 10121017 10121504 -243135079 + L1PA5 LINE L1 5675 6154 0 1473 249 69 39 chr2 10122284 10122774 -243133809 - MLT1D LTR MaLR 0 505 1 201 284 45 0 chr2 10123366 10123433 -243133150 + MIR SINE MIR 78 147 -61 700 185 8 31 chr2 10123887 10124017 -243132566 + AluJo/FLAM SINE Alu 2 128 -174 1566 135 64 70 chr2 10124019 10124331 -243132252 + AluJb SINE Alu 3 312 0 1822 194 62 36 chr2 10126017 10126404 -243130179 + Charlie1b DNA MER1_type 1 405 -2356 2105 138 0 3 chr2 10126404 10126716 -243129867 - AluSq SINE Alu -1 312 2 1822 194 62 36 chr2 10126716 10126832 -243129751 + Charlie1b DNA MER1_type 405 517 -6 427 305 24 42 chr2 10126909 10127076 -243129507 + MIR SINE MIR 29 192 -70 377 258 32 0 chr2 10127650 10127743 -243128840 + MIR3 SINE MIR 61 156 -52 1852 160 7 3 chr2 10128610 10128904 -243127679 + AluJb SINE Alu 1 295 -17 218 267 11 0 chr2 10128990 10129080 -243127503 + (CA)n Simple_repeat Simple_repeat 2 92 0 528 254 0 0 chr2 10129100 10129277 -243127306 + (CA)n Simple_repeat Simple_repeat 1 177 0 1764 207 72 0 chr2 10129845 10130208 -243126375 + MLT1B LTR MaLR 1 389 -1 184 208 42 21 chr2 10130335 10130383 -243126200 + L2 LINE L2 3223 3271 -1 2190 104 0 0 chr2 10130384 10130681 -243125902 - AluSx SINE Alu -13 299 3 1346 268 107 16 chr2 10131115 10131612 -243124971 + MLT1F LTR MaLR 1 542 0 1645 159 10 7 chr2 10131682 10131971 -243124612 - AluJb SINE Alu -16 296 7 2029 67 50 18 chr2 10132179 10132462 -243124121 + AluY SINE Alu 1 292 -19 3849 108 45 69 chr2 10132680 10133214 -243123369 - MER41B LTR ERV1 0 635 118 2188 80 7 0 chr2 10133214 10133503 -243123080 + AluSc SINE Alu 19 309 0 3849 108 45 69 chr2 10133503 10133619 -243122964 - MER41B LTR ERV1 -517 118 1 209 229 83 0 chr2 10134236 10134284 -243122299 - L2 LINE L2 -1 3271 3220 254 373 49 35 chr2 10134773 10135057 -243121526 - L2 LINE L2 -736 2578 2291 233 330 33 0 chr2 10136003 10136094 -243120489 - MLT1J LTR MaLR -92 419 326 334 252 163 0 chr2 10136097 10136220 -243120363 - MLT1J2 LTR MaLR -307 143 1 207 404 60 6 chr2 10136423 10136589 -243119994 - L2 LINE L2 -1855 1459 1285 321 318 79 39 chr2 10136681 10136961 -243119622 - L2 LINE L2 -2361 953 663 589 266 87 0 chr2 10137247 10137431 -243119152 + MIR SINE MIR 14 213 -49 206 83 56 0 chr2 10137819 10137855 -243118728 + T-rich Low_complexity Low_complexity 2 39 0 2223 114 0 0 chr2 10137870 10138168 -243118415 + AluSx SINE Alu 1 298 -14 1901 127 3 24 chr2 10138168 10138459 -243118124 - AluSx SINE Alu -27 285 1 455 48 16 0 chr2 10138465 10138527 -243118056 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 861 211 6 34 chr2 10138539 10138714 -243117869 - AluJo SINE Alu -141 171 2 225 0 0 0 chr2 10138728 10138753 -243117830 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1777 113 0 4 chr2 10138753 10139000 -243117583 - AluSx SINE Alu -66 246 1 1559 160 82 17 chr2 10141262 10141555 -243115028 + AluJo SINE Alu 1 312 0 182 323 48 0 chr2 10142569 10142631 -243113952 - MIR SINE MIR -63 145 81 205 296 31 41 chr2 10142861 10142988 -243113595 - MIR3 SINE MIR -52 156 68 315 267 75 25 chr2 10144834 10144954 -243111629 - L2 LINE L2 -1 3312 3187 736 220 23 0 chr2 10145060 10145233 -243111350 + MER96B DNA MER1_type? 1 177 -240 1581 161 68 0 chr2 10145632 10145912 -243110671 - AluJb SINE Alu -13 299 1 906 169 9 87 chr2 10145922 10146153 -243110430 - L1MB8 LINE L1 -3 6175 5963 914 270 88 47 chr2 10146376 10146739 -243109844 + MLT1J LTR MaLR 33 410 -101 657 266 8 55 chr2 10146770 10147007 -243109576 - L1ME1 LINE L1 -5 6161 5936 250 290 21 11 chr2 10147012 10147105 -243109478 + MLT1J LTR MaLR 414 507 -4 340 295 90 7 chr2 10147201 10147513 -243109070 - LTR16A LTR ERVL -12 438 45 22 35 0 0 chr2 10148405 10148434 -243108149 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 10148492 10148515 -243108068 + AT_rich Low_complexity Low_complexity 1 23 0 394 242 10 39 chr2 10148681 10148784 -243107799 - L1MC4 LINE L1 -1339 6983 1995 387 284 23 0 chr2 10148735 10148823 -243107760 + L1MC4 LINE L1 6614 6703 -1339 * 310 357 0 0 chr2 10148786 10148870 -243107713 - L1MC4 LINE L1 -1342 6700 6617 * 369 318 0 0 chr2 10148836 10148924 -243107659 + L1MC4 LINE L1 6615 6702 -1340 360 322 0 0 chr2 10148872 10148959 -243107624 - L1MC4 LINE L1 -1342 6700 6614 * 266 230 23 0 chr2 10148991 10149078 -243107505 + L1MC4 LINE L1 6614 6702 -1340 306 194 0 0 chr2 10149078 10149140 -243107443 + (CA)n Simple_repeat Simple_repeat 1 62 0 1888 139 7 0 chr2 10149150 10149438 -243107145 - AluSq SINE Alu -23 290 1 669 297 107 30 chr2 10149468 10150035 -243106548 - L1ME3A LINE L1 -247 5923 5308 1509 186 4 0 chr2 10150109 10150372 -243106211 + AluJo SINE Alu 37 300 -12 3900 179 27 27 chr2 10150519 10151704 -243104879 - L1MB7 LINE L1 -54 6130 4928 716 165 0 0 chr2 10151707 10151816 -243104767 + AluSp/q SINE Alu 190 298 -15 995 176 5 10 chr2 10151827 10152020 -243104563 - L1MB7 LINE L1 -1215 4931 4740 1018 157 35 0 chr2 10152087 10152259 -243104324 + MER5A DNA MER1_type 1 178 -11 993 156 85 5 chr2 10152279 10152490 -243104093 + MER33 DNA MER1_type 2 229 -95 3033 136 2 6 chr2 10152965 10153443 -243103140 - MER41B LTR ERV1 0 635 160 1261 91 6 0 chr2 10153605 10153781 -243102802 - MER41B LTR ERV1 -458 177 1 1897 121 0 11 chr2 10154282 10154562 -243102021 - AluJb SINE Alu -17 295 19 240 35 0 0 chr2 10154566 10154595 -243101988 + (T)n Simple_repeat Simple_repeat 1 29 0 180 300 60 30 chr2 10154607 10154707 -243101876 - MIR SINE MIR -64 198 96 1247 211 67 58 chr2 10155012 10155358 -243101225 - MLT1A2 LTR MaLR 0 374 26 208 351 75 11 chr2 10156048 10156142 -243100441 + MIR SINE MIR 47 146 -62 2851 184 13 0 chr2 10156198 10156753 -243099830 + L1MB3 LINE L1 4596 5157 -989 2037 98 0 0 chr2 10156780 10157107 -243099476 + AluSx SINE Alu 6 332 0 2408 149 16 24 chr2 10157107 10157560 -243099023 + L1MB3 LINE L1 5495 6172 -11 919 144 17 22 chr2 10157560 10157732 -243098851 + L1MB3 LINE L1 6005 6183 0 2408 149 16 24 chr2 10157732 10157744 -243098839 + L1MB3 LINE L1 6172 6183 0 1826 194 121 16 chr2 10157834 10158257 -243098326 + MLT1C LTR MaLR 1 467 0 501 291 22 6 chr2 10158811 10158993 -243097590 + MLT1J2 LTR MaLR 1 185 -265 26 64 0 0 chr2 10159946 10159993 -243096590 + GC_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 10160193 10160222 -243096361 + GC_rich Low_complexity Low_complexity 1 29 0 245 197 0 42 chr2 10160234 10160305 -243096278 + C-rich Low_complexity Low_complexity 6 73 0 23 0 0 0 chr2 10160329 10160352 -243096231 + GC_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 10160513 10160556 -243096027 + GC_rich Low_complexity Low_complexity 1 43 0 198 304 14 0 chr2 10161216 10161285 -243095298 + MIR SINE MIR 77 146 -62 22 0 0 0 chr2 10162645 10162667 -243093916 + AT_rich Low_complexity Low_complexity 1 22 0 633 259 68 18 chr2 10165689 10165909 -243090674 - L1MB7 LINE L1 -18 6166 5936 231 61 0 0 chr2 10166301 10166334 -243090249 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 577 219 42 8 chr2 10166346 10166465 -243090118 + FLAM_A SINE Alu 1 123 -10 1860 164 3 0 chr2 10166466 10166753 -243089830 - AluJo SINE Alu -19 293 6 195 267 65 40 chr2 10166763 10166882 -243089701 - MIR SINE MIR -67 141 23 811 188 2 14 chr2 10169180 10169703 -243086880 + (CAT)n Simple_repeat Simple_repeat 1 516 0 873 148 11 6 chr2 10169723 10169899 -243086684 + (CAT)n Simple_repeat Simple_repeat 1 177 0 835 169 0 22 chr2 10169875 10170059 -243086524 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 219 261 0 0 chr2 10170086 10170155 -243086428 + (CCA)n Simple_repeat Simple_repeat 1 69 0 815 200 0 6 chr2 10170175 10170355 -243086228 + (CAT)n Simple_repeat Simple_repeat 1 179 0 262 326 22 11 chr2 10171081 10171170 -243085413 + MIR3 SINE MIR 103 192 -16 2253 88 0 10 chr2 10171275 10171580 -243085003 + AluSg SINE Alu 1 302 -8 2471 40 0 7 chr2 10172434 10172734 -243083849 + AluY SINE Alu 1 298 -13 403 255 103 14 chr2 10172782 10172927 -243083656 + L1ME4a LINE L1 5964 6121 0 2077 108 0 0 chr2 10173155 10173443 -243083140 + AluSx SINE Alu 7 294 -18 2049 137 0 0 chr2 10174842 10175142 -243081441 - AluSx SINE Alu -12 300 1 290 315 36 36 chr2 10175142 10175243 -243081340 - L2 LINE L2 -15 3298 3195 279 0 0 0 chr2 10176995 10177026 -243079557 + (GGGTG)n Simple_repeat Simple_repeat 4 34 0 264 59 0 0 chr2 10177156 10177190 -243079393 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2182 101 156 6 chr2 10177677 10178042 -243078541 + MSTA LTR MaLR 2 421 -7 264 59 0 0 chr2 10178161 10178195 -243078388 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 252 291 95 76 chr2 10178198 10178408 -243078175 - L2 LINE L2 -27 3286 3073 2798 125 26 0 chr2 10178410 10178827 -243077756 - MSTA LTR MaLR 0 428 1 2693 172 13 37 chr2 10178877 10179418 -243077165 - L1MB7 LINE L1 -14 6170 5643 1596 208 0 0 chr2 10179435 10179747 -243076836 - AluJo SINE Alu 0 312 1 450 273 43 14 chr2 10179748 10179887 -243076696 - L2 LINE L2 -241 3072 2930 693 264 159 85 chr2 10179982 10180335 -243076248 + MLT1J LTR MaLR 234 508 -3 434 230 8 71 chr2 10181147 10181273 -243075310 - L2 LINE L2 0 3313 3196 233 264 72 56 chr2 10181802 10181927 -243074656 + MIR SINE MIR 32 158 -104 2240 90 3 34 chr2 10182235 10182557 -243074026 - AluSx SINE Alu 0 312 1 531 140 0 140 chr2 10182566 10182702 -243073881 - FRAM SINE Alu -8 168 52 238 317 146 8 chr2 10182763 10182886 -243073697 - MIR SINE MIR -66 196 57 388 311 78 36 chr2 10184831 10185024 -243071559 + MIR SINE MIR 50 250 -12 451 288 0 8 chr2 10185611 10185729 -243070854 - MIR SINE MIR -63 145 29 213 208 75 0 chr2 10185719 10185772 -243070811 + L2 LINE L2 3206 3262 -10 * 1722 183 38 2 chr2 10185776 10186228 -243070355 + MLT2B1 LTR ERVL 1 519 -1 776 163 7 15 chr2 10186410 10186545 -243070038 - FLAM_C SINE Alu -1 142 9 1342 246 82 19 chr2 10186627 10187090 -243069493 + MLT1D LTR MaLR 1 492 -13 1570 196 48 16 chr2 10187837 10188210 -243068373 - MLT1B LTR MaLR 0 390 6 949 253 145 15 chr2 10189994 10190394 -243066189 - MER31B LTR ERV1 -5 461 10 1421 194 16 44 chr2 10191628 10191735 -243064848 + AluJo SINE Alu 3 111 -201 189 0 0 0 chr2 10191735 10191756 -243064827 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1421 194 16 44 chr2 10191756 10191967 -243064616 + AluJo SINE Alu 111 312 0 373 224 94 151 chr2 10191972 10192120 -243064463 - L1ME2 LINE L1 -240 5924 5794 1835 134 29 0 chr2 10192120 10192397 -243064186 - AluJb SINE Alu -22 290 6 373 224 94 151 chr2 10192397 10192493 -243064090 - L1ME2 LINE L1 -370 5794 5694 1454 194 168 60 chr2 10192509 10193024 -243063559 + MLT1F1 LTR MaLR 1 566 -1 556 309 45 56 chr2 10193040 10193377 -243063206 - L1P5 LINE L1 -498 5658 5326 261 263 15 36 chr2 10193634 10193771 -243062812 - L1ME2 LINE L1 -770 5376 5243 229 313 199 0 chr2 10193774 10193940 -243062643 - L1ME LINE L1 -218 5903 5705 1015 257 34 81 chr2 10193940 10194163 -243062420 - MLT1I LTR MaLR 0 409 210 1668 176 0 26 chr2 10194163 10194476 -243062107 - AluJo SINE Alu -6 306 2 1015 257 34 81 chr2 10194476 10194637 -243061946 - MLT1I LTR MaLR -199 210 43 290 305 81 26 chr2 10194963 10195133 -243061450 - MIR SINE MIR -71 137 5 1094 203 17 17 chr2 10195506 10195743 -243060840 + L1MB7 LINE L1 5894 6130 -54 351 294 59 10 chr2 10195822 10195924 -243060659 + MIR SINE MIR 75 181 -81 378 263 0 10 chr2 10196307 10196406 -243060177 - MIR SINE MIR 0 262 165 236 219 16 16 chr2 10196517 10196581 -243060002 + L1MC5 LINE L1 7844 7907 -54 1125 115 0 0 chr2 10196587 10196744 -243059839 - AluSg/x SINE Alu -22 288 132 1464 103 58 137 chr2 10196744 10197073 -243059510 - AluYb8 SINE Alu -15 303 1 347 165 139 0 chr2 10197108 10197194 -243059389 - MIR SINE MIR -84 178 78 271 316 41 10 chr2 10197615 10197713 -243058870 + MIR SINE MIR 66 166 -96 282 316 53 0 chr2 10197990 10198104 -243058479 - MIR SINE MIR -130 132 13 1720 144 36 4 chr2 10198622 10198899 -243057684 + AluJb SINE Alu 21 306 -6 1301 172 24 58 chr2 10199300 10199616 -243056967 + AluJo SINE Alu 1 306 0 248 244 51 0 chr2 10200006 10200084 -243056499 - L2 LINE L2 -329 2984 2903 404 169 12 36 chr2 10202117 10202283 -243054300 + (TCTCTG)n Simple_repeat Simple_repeat 6 167 0 420 228 0 0 chr2 10202322 10202493 -243054090 + CT-rich Low_complexity Low_complexity 2 172 0 390 162 34 34 chr2 10202466 10202645 -243053938 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 406 239 115 8 chr2 10202721 10202851 -243053732 + MIR SINE MIR 62 205 -57 1901 146 14 0 chr2 10202889 10203177 -243053406 - AluJo SINE Alu -16 296 5 257 200 115 62 chr2 10203212 10203342 -243053241 - L1ME4a LINE L1 -3 6118 5982 209 129 0 48 chr2 10203423 10203485 -243053098 + (TG)n Simple_repeat Simple_repeat 1 59 0 2236 104 3 0 chr2 10205594 10205901 -243050682 + AluSx SINE Alu 3 310 -2 1732 166 0 48 chr2 10205906 10206219 -243050364 + AluJo SINE Alu 1 298 -14 2469 59 13 0 chr2 10206851 10207157 -243049426 + AluY SINE Alu 2 311 0 1739 132 75 4 chr2 10207744 10208024 -243048559 - AluJo SINE Alu -12 300 1 4039 155 46 9 chr2 10208024 10208900 -243047683 + L1MB8 LINE L1 5152 6058 -120 1880 162 0 3 chr2 10208900 10209209 -243047374 + AluJo SINE Alu 1 308 -4 1991 113 14 0 chr2 10209321 10209604 -243046979 - AluSx SINE Alu -2 310 24 278 333 0 11 chr2 10210530 10210617 -243045966 + MIR SINE MIR 60 145 -63 1766 135 26 26 chr2 10210982 10211286 -243045297 - AluJb SINE Alu -8 304 1 329 179 51 26 chr2 10211288 10211366 -243045217 + MER58 DNA MER1_type 174 253 -88 327 255 103 49 chr2 10211480 10211684 -243044899 - L3 LINE CR1 -102 1475 1261 239 394 92 4 chr2 10212337 10212588 -243043995 - L2 LINE L2 -8 3264 2992 2795 6 0 0 chr2 10212594 10212905 -243043678 + AluYa5 SINE Alu 1 311 0 294 268 89 73 chr2 10213520 10213643 -243042940 - MIR SINE MIR -65 197 73 287 295 181 7 chr2 10213905 10214054 -243042529 - MIR SINE MIR -59 203 29 1363 135 5 0 chr2 10214342 10214549 -243042034 + AluJo SINE Alu 87 294 -18 291 235 4 12 chr2 10215685 10215767 -243040816 - FLAM_A SINE Alu -6 127 73 3450 141 55 110 chr2 10215771 10216601 -243039982 + LTR1 LTR ERV1 1 785 0 1868 113 31 14 chr2 10217840 10218131 -243038452 - AluSx SINE Alu -16 296 1 198 0 0 0 chr2 10218685 10218707 -243037876 + (GA)n Simple_repeat Simple_repeat 2 23 0 1859 139 32 0 chr2 10219141 10219422 -243037161 - AluSq SINE Alu -13 300 11 597 200 42 28 chr2 10219435 10219619 -243036964 - MIR SINE MIR -65 197 10 241 254 0 0 chr2 10220331 10220386 -243036197 - MIR SINE MIR -76 132 78 888 203 0 0 chr2 10220409 10220567 -243036016 + AluJb SINE Alu 147 304 -8 491 252 27 27 chr2 10221014 10221161 -243035422 + MER5A DNA MER1_type 38 184 -5 265 279 31 4 chr2 10221172 10221278 -243035305 + MIR SINE MIR 35 143 -65 1936 141 3 3 chr2 10222011 10222309 -243034274 - AluJb SINE Alu -14 298 1 2236 89 3 6 chr2 10223647 10223960 -243032623 - AluSx SINE Alu 0 312 1 1346 143 48 0 chr2 10224703 10224939 -243031644 - AluJo SINE Alu 0 310 65 330 268 0 0 chr2 10225305 10225428 -243031155 + (TG)n Simple_repeat Simple_repeat 2 124 0 526 268 6 3 chr2 10225501 10225815 -243030768 + (TG)n Simple_repeat Simple_repeat 1 315 0 259 258 206 0 chr2 10228228 10228325 -243028258 + MIR SINE MIR 33 149 -59 338 331 51 34 chr2 10229779 10229957 -243026626 - L2 LINE L2 -18 3254 3074 321 304 98 79 chr2 10232491 10232705 -243023878 - L1ME4a LINE L1 -30 6091 5874 558 335 66 12 chr2 10232983 10233225 -243023358 + MIR SINE MIR 2 256 -6 2169 145 124 0 chr2 10233318 10233697 -243022886 + MSTB LTR MaLR 1 426 0 364 188 124 0 chr2 10233742 10233859 -243022724 + L1ME1 LINE L1 6053 6184 0 2055 126 14 3 chr2 10233868 10234161 -243022422 - AluSx SINE Alu -16 296 1 309 249 29 58 chr2 10234261 10234479 -243022104 + (TATTG)n Simple_repeat Simple_repeat 1 211 0 225 0 0 0 chr2 10235648 10235673 -243020910 + (T)n Simple_repeat Simple_repeat 1 25 0 1007 275 41 9 chr2 10235816 10236158 -243020425 - MLT1A2 LTR MaLR -17 357 5 278 261 169 32 chr2 10236219 10236468 -243020115 - L1ME4a LINE L1 -8 6113 5831 1015 96 0 7 chr2 10236470 10236606 -243019977 + AluSq/x SINE Alu 1 135 -177 297 369 167 30 chr2 10236919 10237255 -243019328 + L3 LINE CR1 493 874 -703 688 288 73 67 chr2 10238053 10238369 -243018214 + L2 LINE L2 2954 3271 -1 4939 152 63 30 chr2 10239129 10240023 -243016560 + L1MC1 LINE L1 5411 6333 0 1806 142 4 0 chr2 10240515 10240790 -243015793 + AluJo SINE Alu 1 276 -36 2030 126 0 0 chr2 10240797 10241083 -243015500 - AluSx SINE Alu -22 290 5 210 71 0 0 chr2 10241102 10241130 -243015453 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1009 164 36 76 chr2 10241170 10241395 -243015188 - MER20 DNA MER1_type -2 217 2 219 36 0 0 chr2 10241441 10241469 -243015114 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 290 238 28 chr2 10241896 10242182 -243014401 - L2 LINE L2 -30 3242 2897 2084 80 76 0 chr2 10242264 10242539 -243014044 + AluSc SINE Alu 1 296 -13 186 271 212 42 chr2 10242741 10242859 -243013724 + MER5A DNA MER1_type 17 154 -35 246 289 106 0 chr2 10245193 10245297 -243011286 + MIR3 SINE MIR 47 161 -47 204 40 0 0 chr2 10245301 10245326 -243011257 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1001 220 119 42 chr2 10246245 10246424 -243010159 + MLT1A2 LTR MaLR 1 165 -209 3231 150 10 2 chr2 10246424 10246903 -243009680 + MER66B LTR ERV1 1 483 -3 1001 220 119 42 chr2 10246903 10247059 -243009524 + MLT1A2 LTR MaLR 165 362 -12 744 298 59 12 chr2 10247064 10247403 -243009180 - L1ME3A LINE L1 -258 5912 5558 1071 186 70 64 chr2 10248848 10249176 -243007407 - L1MB7 LINE L1 0 6184 5855 2091 98 0 7 chr2 10249186 10249472 -243007111 - AluSg1 SINE Alu -25 284 1 1730 168 7 0 chr2 10249473 10249765 -243006818 - AluJo SINE Alu -18 294 1 494 238 79 0 chr2 10249765 10249929 -243006654 - L1M4 LINE L1 -2561 3585 3409 798 258 58 48 chr2 10249967 10250232 -243006351 - MIR SINE MIR 0 262 1 246 269 156 50 chr2 10250821 10250962 -243005621 - MIR3 SINE MIR -19 189 34 1749 189 0 0 chr2 10251259 10251566 -243005017 + AluJo SINE Alu 3 309 -3 1035 234 58 23 chr2 10251926 10252216 -243004367 + L1MC1 LINE L1 6013 6316 -17 1840 171 7 3 chr2 10252216 10252521 -243004062 - AluJb SINE Alu -6 306 1 1035 234 58 23 chr2 10252521 10252538 -243004045 + L1MC1 LINE L1 6316 6331 -2 414 0 0 0 chr2 10252538 10252584 -243003999 + (CA)n Simple_repeat Simple_repeat 2 47 0 322 193 174 28 chr2 10252780 10252889 -243003694 - L2 LINE L2 -3 3269 3145 562 266 23 60 chr2 10253107 10253325 -243003258 + MIR SINE MIR 21 226 -36 1431 84 0 0 chr2 10256633 10257031 -242999552 + (CCA)n Simple_repeat Simple_repeat 1 398 0 458 327 199 6 chr2 10257288 10257649 -242998934 - L2 LINE L2 -20 3293 2863 306 148 0 0 chr2 10258168 10258222 -242998361 + (CA)n Simple_repeat Simple_repeat 1 54 0 215 234 0 0 chr2 10259069 10259116 -242997467 - L2 LINE L2 -10 3262 3216 2294 81 10 0 chr2 10259316 10259624 -242996959 - AluSx SINE Alu -1 311 1 244 369 117 0 chr2 10259669 10259780 -242996803 + L2 LINE L2 3139 3262 -10 26 30 0 0 chr2 10260665 10260698 -242995885 + AT_rich Low_complexity Low_complexity 1 33 0 193 340 19 19 chr2 10260718 10260824 -242995759 - MIR3 SINE MIR -21 187 82 450 0 0 0 chr2 10260879 10260929 -242995654 + (TG)n Simple_repeat Simple_repeat 1 50 0 2043 108 4 0 chr2 10260929 10261207 -242995376 - AluSx SINE Alu -33 279 1 382 263 78 62 chr2 10262469 10262648 -242993935 - MIR SINE MIR -56 206 25 237 191 0 48 chr2 10264813 10264876 -242991707 - L2 LINE L2 -12 3260 3201 568 284 214 23 chr2 10264880 10265222 -242991361 - L2 LINE L2 -3 3310 2904 262 360 80 28 chr2 10265248 10265498 -242991085 - L2 LINE L2 -96 3176 2914 1236 199 40 46 chr2 10266316 10266642 -242989941 - MER33 DNA MER1_type 0 324 1 2085 115 10 10 chr2 10267202 10267514 -242989069 - AluSx SINE Alu 0 312 1 279 190 0 0 chr2 10267828 10267886 -242988697 + T-rich Low_complexity Low_complexity 1 58 0 389 310 155 34 chr2 10269189 10269428 -242987155 - HAL1 LINE L1 -1837 670 403 799 288 35 63 chr2 10269450 10269625 -242986958 - MLT1J2 LTR MaLR -2 448 270 764 262 15 34 chr2 10269625 10269831 -242986752 + MER105 DNA DNA 1 202 -2 799 288 35 63 chr2 10269831 10270082 -242986501 - MLT1J2 LTR MaLR -180 270 34 186 276 40 40 chr2 10270121 10270197 -242986386 + L2 LINE L2 204 279 -3035 198 262 0 0 chr2 10271453 10271495 -242985088 + MIR SINE MIR 35 76 -186 1785 163 15 66 chr2 10271709 10272102 -242984481 - MLT1B LTR MaLR -17 373 1 329 150 175 0 chr2 10273612 10273692 -242982891 - MLT1C LTR MaLR -369 98 5 567 140 20 20 chr2 10273950 10274050 -242982533 + FLAM_C SINE Alu 34 133 -10 2275 106 0 0 chr2 10274505 10274808 -242981775 + AluSq SINE Alu 1 303 -10 262 296 28 0 chr2 10274909 10275017 -242981566 - L1MC4a LINE L1 -1869 5939 5829 314 290 76 0 chr2 10275031 10275162 -242981421 - L1MC4a LINE L1 -2084 5724 5584 1616 186 21 0 chr2 10275196 10275481 -242981102 + AluJo SINE Alu 13 303 -9 1784 131 42 48 chr2 10275559 10275683 -242980900 + AluSx SINE Alu 1 124 -188 228 35 0 0 chr2 10275683 10275712 -242980871 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1784 131 42 48 chr2 10275712 10275899 -242980684 + AluSx SINE Alu 124 310 -2 2237 112 0 3 chr2 10276352 10276666 -242979917 + AluSq SINE Alu 1 313 0 1419 171 91 25 chr2 10277634 10277920 -242978663 - AluSq SINE Alu -8 305 1 245 328 172 0 chr2 10278039 10278173 -242978410 - MIR SINE MIR -2 260 104 2033 129 10 0 chr2 10278188 10278482 -242978101 - AluSx SINE Alu -15 297 1 1881 161 3 0 chr2 10278856 10279155 -242977428 + AluJo SINE Alu 13 312 0 384 329 97 35 chr2 10280008 10280236 -242976347 - L1ME3 LINE L1 -1 6161 5920 241 298 53 10 chr2 10280674 10280793 -242975790 + MIR SINE MIR 38 159 -66 2474 53 0 3 chr2 10281235 10281535 -242975048 + AluY SINE Alu 1 299 -12 199 267 218 10 chr2 10281835 10281936 -242974647 + MIR SINE MIR 141 262 0 236 341 34 0 chr2 10283000 10283088 -242973495 - MIR SINE MIR -78 184 94 747 186 0 0 chr2 10285553 10285682 -242970901 - FLAM_A SINE Alu 0 133 5 247 214 36 0 chr2 10286592 10286648 -242969935 - MLT2A2 LTR ERVL -3 450 393 801 196 0 0 chr2 10286649 10286916 -242969667 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 975 147 0 0 chr2 10286935 10287112 -242969471 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 825 176 0 0 chr2 10287128 10287304 -242969279 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 1195 206 142 55 chr2 10287312 10287748 -242968835 - MLT2B1 LTR ERVL -46 474 1 2263 89 13 0 chr2 10288047 10288349 -242968234 + AluY SINE Alu 1 306 -5 181 185 222 0 chr2 10288467 10288521 -242968062 - L3 LINE CR1 -408 1169 1104 275 309 37 0 chr2 10288847 10288928 -242967655 - L3 LINE CR1 -533 1044 961 499 299 86 8 chr2 10288966 10289204 -242967379 - MIR SINE MIR 0 262 15 187 93 47 0 chr2 10290594 10290637 -242965946 + (TG)n Simple_repeat Simple_repeat 1 45 0 310 162 54 24 chr2 10290656 10290956 -242965627 + (TG)n Simple_repeat Simple_repeat 1 309 0 330 118 45 56 chr2 10290990 10291168 -242965415 + (TG)n Simple_repeat Simple_repeat 1 176 0 200 220 50 10 chr2 10291842 10291942 -242964641 + (TG)n Simple_repeat Simple_repeat 1 104 0 439 257 37 0 chr2 10292757 10292866 -242963717 - MER53 DNA DNA 0 189 77 303 224 103 9 chr2 10293663 10293779 -242962804 + MIR3 SINE MIR 15 141 -67 238 289 192 19 chr2 10294886 10295386 -242961197 - L1MC4a LINE L1 -1838 5970 5325 1956 126 14 7 chr2 10295386 10295679 -242960904 + AluSx SINE Alu 1 295 -17 238 289 192 19 chr2 10295679 10295767 -242960816 - L1MC4a LINE L1 -2483 5325 5254 312 296 112 8 chr2 10295803 10295928 -242960655 - L1MC4a LINE L1 -1085 5061 4924 207 250 0 94 chr2 10295929 10296025 -242960558 + MER5A DNA MER1_type 85 171 -18 230 250 100 12 chr2 10295942 10296022 -242960561 - MER5B DNA MER1_type -70 108 22 1694 167 31 0 chr2 10298384 10298671 -242957912 - AluJb SINE Alu -16 296 1 1998 108 7 7 chr2 10300135 10300423 -242956160 - AluJb SINE Alu -12 300 13 2056 98 0 0 chr2 10303062 10303336 -242953247 - AluSx SINE Alu -15 297 24 2264 75 3 23 chr2 10303556 10303863 -242952720 - AluSp SINE Alu -12 301 1 21 82 0 0 chr2 10304404 10304453 -242952130 + AT_rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr2 10305464 10305505 -242951078 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 10305624 10305645 -242950938 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 10305708 10305735 -242950848 + GC_rich Low_complexity Low_complexity 1 27 0 26 93 0 0 chr2 10305848 10305923 -242950660 + GC_rich Low_complexity Low_complexity 1 75 0 278 128 26 26 chr2 10305979 10306057 -242950526 + (CCCCG)n Simple_repeat Simple_repeat 4 81 0 22 0 0 0 chr2 10306106 10306128 -242950455 + GC_rich Low_complexity Low_complexity 1 22 0 352 244 12 0 chr2 10307004 10307086 -242949497 + MIR SINE MIR 42 124 -84 189 121 0 0 chr2 10307197 10307230 -242949353 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2137 116 13 0 chr2 10308259 10308560 -242948023 - AluSx SINE Alu -7 305 1 344 328 37 8 chr2 10308715 10308849 -242947734 + MIR3 SINE MIR 65 202 -6 186 43 0 0 chr2 10309005 10309028 -242947555 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1987 112 0 0 chr2 10309036 10309312 -242947271 - AluSx SINE Alu -36 276 1 729 322 25 12 chr2 10309616 10309939 -242946644 + MARNA DNA Mariner 231 557 -29 2087 116 0 13 chr2 10310118 10310421 -242946162 - AluSx SINE Alu -13 299 1 237 262 68 19 chr2 10311647 10311750 -242944833 - L2 LINE L2 -25 3247 3140 183 100 0 0 chr2 10312396 10312426 -242944157 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 480 301 75 0 chr2 10312716 10312902 -242943681 - MLT1L LTR MaLR -52 563 364 626 182 115 24 chr2 10313119 10313284 -242943299 + MLT1C LTR MaLR 1 180 -210 1350 161 4 37 chr2 10313284 10313527 -242943056 + AluJo SINE Alu 1 235 -77 1112 217 64 4 chr2 10313548 10313797 -242942786 + MLT1C LTR MaLR 199 462 -5 400 195 164 23 chr2 10314023 10314151 -242942432 + MLT1G LTR MaLR 443 588 -2 451 278 198 0 chr2 10314266 10314428 -242942155 + MIR SINE MIR 17 210 -52 2220 223 63 92 chr2 10314439 10314496 -242942087 - MER97a DNA MER1_type? -11 883 826 3157 75 36 32 chr2 10314496 10314938 -242941645 - MLT2A1 LTR ERVL 0 444 1 2220 223 63 92 chr2 10314938 10315787 -242940796 - MER97a DNA MER1_type? -68 826 3 2248 79 3 7 chr2 10316119 10316422 -242940161 + AluY SINE Alu 1 302 -9 2011 134 7 0 chr2 10317289 10317588 -242938995 - AluSx SINE Alu -9 303 3 181 244 44 0 chr2 10317645 10317690 -242938893 - L2 LINE L2 -1 3312 3266 850 227 0 45 chr2 10318803 10318921 -242937662 + MER3 DNA MER1_type 21 128 -81 2280 99 3 0 chr2 10318921 10319225 -242937358 - AluSq SINE Alu -8 305 1 850 227 0 45 chr2 10319225 10319304 -242937279 + MER3 DNA MER1_type 128 209 0 480 286 16 49 chr2 10320048 10320233 -242936350 + MIR3 SINE MIR 15 193 -15 567 265 46 7 chr2 10320450 10320601 -242935982 + MIR SINE MIR 20 176 -86 1030 113 0 0 chr2 10320669 10320810 -242935773 + AluJb SINE Alu 1 141 -171 189 0 0 0 chr2 10320828 10320849 -242935734 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1560 139 44 26 chr2 10320867 10321140 -242935443 + AluJo SINE Alu 5 282 -30 459 78 0 0 chr2 10321234 10321298 -242935285 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 949 134 92 46 chr2 10321397 10321614 -242934969 - L1MC2 LINE L1 -9 6335 6109 1400 149 0 69 chr2 10321625 10321901 -242934682 - AluJb SINE Alu -6 306 50 398 293 38 25 chr2 10322126 10322283 -242934300 + MER5B DNA MER1_type 11 169 -9 2021 121 17 0 chr2 10322384 10322682 -242933901 - AluSx SINE Alu -8 304 2 2507 50 0 0 chr2 10322692 10322989 -242933594 - AluY SINE Alu -14 297 1 1788 155 20 0 chr2 10323603 10323900 -242932683 + AluJo SINE Alu 1 303 -9 714 118 0 152 chr2 10325156 10325189 -242931394 - L1MB5 LINE L1 -10 6164 6128 225 0 0 0 chr2 10325189 10325214 -242931369 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1975 127 0 0 chr2 10325214 10325497 -242931086 - AluSx SINE Alu -29 283 1 714 118 0 152 chr2 10325497 10325526 -242931057 - L1MB5 LINE L1 -45 6129 6097 2202 74 3 0 chr2 10325526 10325832 -242930751 + AluSp SINE Alu 1 307 0 714 118 0 152 chr2 10325832 10325943 -242930640 - L1MB5 LINE L1 -77 6097 6014 1810 149 3 14 chr2 10325991 10326286 -242930297 - AluJo SINE Alu -20 292 1 504 229 186 32 chr2 10327920 10328108 -242928475 - MIR SINE MIR -17 245 29 483 263 94 52 chr2 10328450 10328663 -242927920 + MIR SINE MIR 20 241 -21 653 244 34 11 chr2 10328955 10329131 -242927452 + MIR SINE MIR 36 215 -47 23 54 0 0 chr2 10329290 10329327 -242927256 + AT_rich Low_complexity Low_complexity 1 37 0 218 316 25 0 chr2 10329402 10329481 -242927102 - MIR SINE MIR -29 233 153 1781 161 3 7 chr2 10330157 10330462 -242926121 - AluJb SINE Alu -8 304 1 183 303 252 0 chr2 10330846 10330965 -242925618 + MIR SINE MIR 51 199 -63 2578 40 0 0 chr2 10331305 10331607 -242924976 - AluY SINE Alu -9 302 1 756 103 154 0 chr2 10331908 10332025 -242924558 - AluJb SINE Alu -176 136 2 193 329 0 0 chr2 10332602 10332672 -242923911 - MIR SINE MIR -116 146 77 517 127 59 3 chr2 10334089 10334309 -242922274 + AluSx SINE Alu 1 306 -4 608 246 24 12 chr2 10334467 10334634 -242921949 + MER20 DNA MER1_type 36 204 -15 261 98 0 0 chr2 10334705 10334746 -242921837 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 245 300 71 41 chr2 10334800 10334970 -242921613 - L2 LINE L2 -101 3171 2997 254 300 25 0 chr2 10335983 10336063 -242920520 + L2 LINE L2 2997 3078 -194 330 298 141 16 chr2 10337233 10337424 -242919159 - MIR SINE MIR 0 262 48 1058 189 0 0 chr2 10337495 10337659 -242918924 - AluJo SINE Alu -14 298 135 318 50 0 0 chr2 10337660 10337700 -242918883 + (TTTTC)n Simple_repeat Simple_repeat 1 40 0 374 183 0 12 chr2 10337711 10337793 -242918790 + CT-rich Low_complexity Low_complexity 2 82 0 366 357 138 19 chr2 10337793 10338216 -242918367 - HAL1 LINE L1 -1206 1301 881 637 197 7 7 chr2 10338217 10338369 -242918214 + CT-rich Low_complexity Low_complexity 1 152 0 333 177 76 13 chr2 10338369 10338448 -242918135 - AluJo SINE Alu -169 133 50 187 98 0 49 chr2 10338459 10338500 -242918083 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 530 228 49 0 chr2 10338502 10338625 -242917958 - AluJo SINE Alu -173 129 1 421 304 30 0 chr2 10339021 10339156 -242917427 + MLT1H LTR MaLR 406 544 -5 2987 241 70 14 chr2 10339602 10340361 -242916222 - MER21B LTR ERV1 -44 819 19 267 238 60 12 chr2 10340359 10340443 -242916140 - MER21B LTR ERV1 -757 106 19 * 373 186 10 98 chr2 10340442 10340544 -242916039 - MER21B LTR ERV1 -758 105 13 448 297 145 56 chr2 10340964 10341483 -242915100 - L1ME4a LINE L1 -104 6017 5401 2320 122 0 0 chr2 10341483 10341795 -242914788 + AluSx SINE Alu 1 312 0 448 297 145 56 chr2 10341795 10341958 -242914625 - L1ME4a LINE L1 -720 5401 5254 390 314 66 39 chr2 10342258 10342516 -242914067 - L1ME4a LINE L1 -1276 4870 4606 694 167 0 9 chr2 10342527 10342641 -242913942 + FLAM_C SINE Alu 14 126 -17 43 20 0 0 chr2 10342652 10342702 -242913881 + AT_rich Low_complexity Low_complexity 1 50 0 494 297 100 46 chr2 10342702 10343373 -242913210 - L1ME4a LINE L1 -1526 4620 3914 315 0 0 0 chr2 10343386 10343421 -242913162 + (TG)n Simple_repeat Simple_repeat 1 35 0 308 209 185 61 chr2 10343591 10343888 -242912695 + L1ME4a LINE L1 5788 6121 0 377 294 14 25 chr2 10344185 10344359 -242912224 + MIR SINE MIR 17 188 -60 917 263 58 11 chr2 10346028 10346393 -242910190 - HAL1 LINE L1 -1126 1381 1000 247 279 93 66 chr2 10346497 10346628 -242909955 - HAL1 LINE L1 -1651 856 717 2726 36 0 7 chr2 10346628 10346935 -242909648 - AluY SINE Alu -6 305 1 247 279 93 66 chr2 10346935 10346986 -242909597 - HAL1 LINE L1 -1790 717 669 2214 128 0 6 chr2 10347933 10348246 -242908337 - AluSx SINE Alu -1 311 1 273 324 46 17 chr2 10348591 10348764 -242907819 + L3 LINE CR1 1056 1233 -344 2741 205 13 8 chr2 10348781 10349395 -242907188 + L1MB7 LINE L1 4465 5081 -1065 1485 114 5 0 chr2 10349423 10349616 -242906967 + AluSq SINE Alu 1 194 -119 2415 162 54 2 chr2 10349655 10350136 -242906447 + L1MB7 LINE L1 5660 6165 -19 2362 108 0 3 chr2 10350285 10350590 -242905993 + AluSq SINE Alu 1 304 -9 380 290 30 77 chr2 10350610 10350779 -242905804 + L3 LINE CR1 1415 1575 -2 345 227 0 52 chr2 10351662 10351759 -242904824 - MIR SINE MIR -78 130 39 910 140 11 11 chr2 10352372 10352551 -242904032 + CT-rich Low_complexity Low_complexity 2 180 0 223 147 0 0 chr2 10352551 10352585 -242903998 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1071 268 70 6 chr2 10352587 10352901 -242903682 - L1ME LINE L1 -362 5804 5471 2090 102 7 21 chr2 10353677 10353989 -242902594 - AluSx SINE Alu 0 309 2 307 247 34 0 chr2 10354578 10354667 -242901916 - L1MC5 LINE L1 -62 7899 7808 822 157 0 15 chr2 10354821 10354955 -242901628 + FLAM_C SINE Alu 1 132 -1 447 285 99 17 chr2 10355007 10355179 -242901404 - MIR SINE MIR -15 247 62 21 36 0 0 chr2 10355435 10355463 -242901120 + GC_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr2 10355962 10355989 -242900594 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2213 137 0 0 chr2 10356008 10356315 -242900268 + AluSx SINE Alu 1 307 -5 315 254 0 0 chr2 10356350 10356417 -242900166 - MIR SINE MIR -106 156 90 360 233 78 0 chr2 10356428 10356518 -242900065 - MER91A DNA MER1_type -11 185 89 384 262 37 9 chr2 10356994 10357101 -242899482 + L3 LINE CR1 1377 1486 -91 593 269 88 0 chr2 10357962 10358133 -242898450 + MIR SINE MIR 77 262 0 325 234 72 36 chr2 10361143 10361254 -242895329 + MIR SINE MIR 65 179 -83 2239 114 10 0 chr2 10361480 10361786 -242894797 + AluSg SINE Alu 1 309 -1 230 312 18 37 chr2 10362175 10362284 -242894299 + MIR3 SINE MIR 93 199 -9 196 259 37 0 chr2 10363408 10363462 -242893121 + MER5A DNA MER1_type 60 115 -74 1917 123 0 49 chr2 10363513 10363821 -242892762 + AluSx SINE Alu 1 293 -19 520 303 135 14 chr2 10364959 10365256 -242891327 + L1ME4a LINE L1 5534 5866 -255 1701 110 0 9 chr2 10365257 10365485 -242891098 - AluJb SINE Alu -15 297 72 7386 210 60 34 chr2 10365485 10366372 -242890211 + L1ME1 LINE L1 3439 4301 -1865 1846 178 3 3 chr2 10366372 10366676 -242889907 + AluJb SINE Alu 1 304 -8 7386 210 60 34 chr2 10366676 10368428 -242888155 + L1ME1 LINE L1 4301 6160 -6 339 281 0 73 chr2 10369382 10369546 -242887037 + L1ME4a LINE L1 5967 6118 -3 387 0 0 0 chr2 10369550 10369593 -242886990 + (GA)n Simple_repeat Simple_repeat 1 43 0 252 0 0 0 chr2 10369592 10369620 -242886963 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 463 216 114 17 chr2 10369938 10370152 -242886431 - L1ME3 LINE L1 -9 6161 5902 268 213 0 43 chr2 10370155 10370343 -242886240 + (TA)n Simple_repeat Simple_repeat 1 180 0 217 203 0 41 chr2 10370355 10370478 -242886105 + (TA)n Simple_repeat Simple_repeat 2 119 0 794 300 92 13 chr2 10370497 10370877 -242885706 - L1ME3 LINE L1 -254 5916 5507 2282 105 10 0 chr2 10371070 10371376 -242885207 + AluSx SINE Alu 1 309 -3 425 270 93 39 chr2 10371914 10372118 -242884465 + MIR SINE MIR 45 259 -3 209 300 120 27 chr2 10372620 10372770 -242883813 + MIR3 SINE MIR 7 170 -38 1316 296 41 52 chr2 10373296 10373867 -242882716 - L1MEd LINE L1 -4869 1250 689 2352 112 0 3 chr2 10373867 10374171 -242882412 - AluSc SINE Alu -6 303 1 1316 296 41 52 chr2 10374171 10374453 -242882130 - L1MEd LINE L1 -5430 689 406 587 284 134 50 chr2 10374839 10375220 -242881363 - MLT1L LTR MaLR -4 611 199 769 64 54 25 chr2 10375513 10375828 -242880755 + (CA)n Simple_repeat Simple_repeat 1 324 0 643 76 64 18 chr2 10375841 10376012 -242880571 + (CA)n Simple_repeat Simple_repeat 2 180 0 462 119 63 13 chr2 10376044 10376203 -242880380 + (CA)n Simple_repeat Simple_repeat 2 168 0 224 279 27 54 chr2 10376842 10376953 -242879630 + L2 LINE L2 2915 3022 -291 438 295 66 0 chr2 10377059 10377181 -242879402 + L2 LINE L2 3183 3312 -1 1621 196 17 26 chr2 10377901 10378248 -242878335 - MLT1A2 LTR MaLR -7 367 24 180 0 0 0 chr2 10378571 10378591 -242877992 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 339 285 46 31 chr2 10378789 10378919 -242877664 + MLT1B LTR MaLR 235 366 -24 291 279 95 7 chr2 10379789 10379936 -242876647 + (CCCCG)n Simple_repeat Simple_repeat 5 164 0 389 239 18 18 chr2 10381208 10381321 -242875262 - MLT1L LTR MaLR -309 196 84 233 250 22 76 chr2 10382027 10382119 -242874464 + MIR3 SINE MIR 101 187 -21 1163 143 46 6 chr2 10382136 10382512 -242874071 - MSTB LTR MaLR 0 426 1 229 346 59 7 chr2 10382516 10382652 -242873931 - MIR SINE MIR -12 250 108 228 276 75 0 chr2 10383671 10383784 -242872799 - MIR SINE MIR -69 139 30 2525 83 3 0 chr2 10384389 10384691 -242871892 - AluSx SINE Alu -9 303 1 568 233 52 65 chr2 10384782 10385014 -242871569 + MIR SINE MIR 23 251 -11 1529 256 81 5 chr2 10385090 10385511 -242871072 - MLT1J LTR MaLR -58 453 1 2187 112 7 0 chr2 10385566 10385860 -242870723 - AluY SINE Alu -15 296 1 2436 51 3 45 chr2 10385871 10386182 -242870401 - AluY SINE Alu -13 298 1 1880 120 6 70 chr2 10386471 10386787 -242869796 + AluJb SINE Alu 1 296 -16 2345 81 3 10 chr2 10387331 10387626 -242868957 - AluSq SINE Alu -16 297 5 1998 140 20 3 chr2 10387631 10387924 -242868659 - AluSx SINE Alu -14 298 1 233 222 0 0 chr2 10388215 10388260 -242868323 + MIR3 SINE MIR 112 156 -52 434 189 0 115 chr2 10388729 10388851 -242867732 + FLAM_A SINE Alu 1 108 -34 2382 103 3 0 chr2 10388992 10389303 -242867280 + AluSq SINE Alu 1 312 -1 947 219 52 18 chr2 10389572 10390010 -242866573 + MLT1C LTR MaLR 1 467 0 443 303 34 11 chr2 10390164 10390342 -242866241 - ERVL LTR ERVL -2214 3550 3369 2178 139 0 0 chr2 10390770 10391079 -242865504 - AluSx SINE Alu -2 310 2 428 225 71 59 chr2 10392679 10392848 -242863735 + MIR SINE MIR 20 190 -72 299 299 331 0 chr2 10392889 10393046 -242863537 - MIR SINE MIR -48 214 6 219 298 32 48 chr2 10393328 10393452 -242863131 - MIR SINE MIR -68 194 73 216 226 16 16 chr2 10394158 10394220 -242862363 - MER5B DNA MER1_type -110 68 7 1801 78 5 0 chr2 10394702 10394921 -242861662 + AluSg/x SINE Alu 80 299 -11 2350 98 0 7 chr2 10395545 10395851 -242860732 + AluSq SINE Alu 1 304 -9 1739 158 13 43 chr2 10396262 10396566 -242860017 + AluJo SINE Alu 1 295 -17 375 209 6 122 chr2 10396612 10396784 -242859799 + Charlie7 DNA MER1_type 317 468 -2144 1978 250 67 46 chr2 10396801 10397517 -242859066 + MER21B LTR ERV1 22 752 -111 3310 235 113 87 chr2 10397554 10397875 -242858708 + Charlie7 DNA MER1_type 527 838 -1774 2269 99 6 16 chr2 10397875 10398188 -242858395 - AluY SINE Alu -1 310 1 3310 235 113 87 chr2 10398188 10398210 -242858373 + Charlie7 DNA MER1_type 838 858 -1754 1930 136 7 20 chr2 10398210 10398511 -242858072 - AluJo SINE Alu -15 297 1 3310 235 113 87 chr2 10398511 10398891 -242857692 + Charlie7 DNA MER1_type 858 1227 -1385 2783 39 0 0 chr2 10398891 10399202 -242857381 + AluY SINE Alu 1 311 0 3310 235 113 87 chr2 10399202 10399844 -242856739 + Charlie7 DNA MER1_type 1227 1851 -761 2341 96 7 13 chr2 10399844 10400147 -242856436 - AluSx SINE Alu -11 301 1 3310 235 113 87 chr2 10400147 10400720 -242855863 + Charlie7 DNA MER1_type 1851 2522 -90 2196 109 0 3 chr2 10400720 10401024 -242855559 + AluSg SINE Alu 1 303 0 3310 235 113 87 chr2 10401024 10401050 -242855533 + Charlie7 DNA MER1_type 2522 2546 -66 2387 78 7 3 chr2 10401083 10401391 -242855192 + AluYb8 SINE Alu 2 310 -8 915 301 152 12 chr2 10401416 10401924 -242854659 + MLT1H1 LTR MaLR 26 555 0 654 139 18 96 chr2 10402022 10402055 -242854528 - L1MB3 LINE L1 -2 6181 6147 2371 97 0 3 chr2 10402055 10402354 -242854229 + AluSx SINE Alu 1 298 -14 359 21 21 0 chr2 10402358 10402406 -242854177 + (CA)n Simple_repeat Simple_repeat 2 50 0 654 139 18 96 chr2 10402406 10402533 -242854050 - L1MB3 LINE L1 -39 6144 6029 1119 84 0 14 chr2 10402536 10402679 -242853904 + AluSq/x SINE Alu 1 141 -171 2211 121 6 10 chr2 10402679 10402993 -242853590 + AluSq SINE Alu 1 313 0 955 170 37 54 chr2 10402993 10403205 -242853378 - L1MB3 LINE L1 -144 6039 5830 1943 137 9 44 chr2 10403205 10403374 -242853209 - AluSx SINE Alu -8 304 150 606 63 0 0 chr2 10403374 10403453 -242853130 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1943 137 9 44 chr2 10403453 10403598 -242852985 - AluSx SINE Alu -162 150 1 955 170 37 54 chr2 10403598 10403626 -242852957 - L1MB3 LINE L1 -353 5830 5803 2136 128 7 0 chr2 10403626 10403922 -242852661 + AluSx SINE Alu 1 298 -14 1785 188 114 53 chr2 10404761 10405250 -242851333 + MLT2B1 LTR ERVL 2 520 0 375 256 120 23 chr2 10406850 10406983 -242849600 - MLT1J LTR MaLR -219 292 147 3308 153 52 48 chr2 10408409 10408534 -242848049 + MER50 LTR ERV1 1 124 -610 2221 117 16 0 chr2 10408534 10408841 -242847742 + AluSx SINE Alu 1 312 0 3308 153 52 48 chr2 10408841 10409445 -242847138 + MER50 LTR ERV1 124 733 -1 264 77 0 0 chr2 10409511 10409550 -242847033 + (TC)n Simple_repeat Simple_repeat 1 39 0 673 170 67 0 chr2 10409757 10409892 -242846691 - MLT1C LTR MaLR 0 467 324 2281 98 10 3 chr2 10410871 10411168 -242845415 + AluSq SINE Alu 1 299 -14 1174 253 10 3 chr2 10411168 10411472 -242845111 + L1MB4 LINE L1 5598 5903 -277 1236 187 67 0 chr2 10411825 10412093 -242844490 + L1MB3 LINE L1 5856 6141 -42 2573 75 3 0 chr2 10412095 10412401 -242844182 + AluSp SINE Alu 1 307 -6 1177 237 48 0 chr2 10413498 10413810 -242842773 - L1MC3 LINE L1 0 7785 7459 180 282 0 0 chr2 10413811 10413850 -242842733 + L2 LINE L2 3139 3177 -95 684 258 32 53 chr2 10414217 10414500 -242842083 + MLT1C LTR MaLR 189 465 -2 468 270 88 7 chr2 10414511 10414659 -242841924 - L2 LINE L2 0 3313 3154 2200 128 0 0 chr2 10414667 10414971 -242841612 + AluSx SINE Alu 3 306 -6 236 222 32 63 chr2 10415739 10415802 -242840781 - L2 LINE L2 0 3272 3212 245 262 68 0 chr2 10416519 10416622 -242839961 - MIR SINE MIR -131 131 22 335 207 25 74 chr2 10417346 10417467 -242839116 - MIR SINE MIR -56 206 92 542 164 199 0 chr2 10417915 10418061 -242838522 + MER5A DNA MER1_type 1 175 -14 271 288 75 7 chr2 10418063 10418209 -242838374 + L2 LINE L2 2953 3108 -205 2314 109 3 7 chr2 10420096 10420400 -242836183 - AluSq SINE Alu -10 303 1 298 268 101 57 chr2 10420722 10420950 -242835633 - MER112 DNA MER1_type -6 254 17 1052 75 0 0 chr2 10420958 10421092 -242835491 + AluSg/x SINE Alu 174 307 -3 2342 105 7 7 chr2 10421096 10421402 -242835181 + AluSc SINE Alu 2 307 -2 2270 121 3 6 chr2 10421463 10421776 -242834807 + AluSx SINE Alu 1 312 0 493 244 71 56 chr2 10421941 10422138 -242834445 + L2 LINE L2 1381 1580 -1734 367 207 79 43 chr2 10422178 10422318 -242834265 + MER53 DNA DNA 3 147 -42 1251 199 106 23 chr2 10422336 10422741 -242833842 + MLT1F LTR MaLR 89 542 0 701 264 147 15 chr2 10422751 10423077 -242833506 + L2 LINE L2 1590 1958 -1356 404 256 8 60 chr2 10423078 10423195 -242833388 - L2 LINE L2 -2 3311 3201 364 261 93 25 chr2 10423249 10423410 -242833173 + L1MC5 LINE L1 7730 7901 -60 588 292 51 4 chr2 10423510 10423779 -242832804 - L2 LINE L2 -298 3015 2726 1178 236 8 4 chr2 10423806 10424065 -242832518 + AluJo SINE Alu 21 280 -32 389 317 38 43 chr2 10424105 10424291 -242832292 + L2 LINE L2 2344 2528 -786 2521 100 0 0 chr2 10424799 10425110 -242831473 + AluSx SINE Alu 1 311 -1 620 274 54 0 chr2 10425124 10425292 -242831291 + L1PB4 LINE L1 5966 6142 -14 394 222 48 84 chr2 10425364 10425531 -242831052 + L1MC4a LINE L1 5764 5924 -1884 1738 92 0 0 chr2 10425674 10425891 -242830692 - AluY SINE Alu 0 311 95 569 41 0 0 chr2 10425891 10425964 -242830619 + AluY SINE Alu 27 99 -212 361 298 101 24 chr2 10426773 10426981 -242829602 - MIR SINE MIR -31 231 8 298 276 14 48 chr2 10427628 10427773 -242828810 + GA-rich Low_complexity Low_complexity 4 143 0 583 183 58 8 chr2 10428020 10428140 -242828443 - FLAM_A SINE Alu -8 134 9 1004 182 43 34 chr2 10428337 10428510 -242828073 - MER46A DNA MER2_type -2495 236 59 1802 152 139 16 chr2 10428510 10428891 -242827692 + MSTA LTR MaLR 1 428 0 1004 182 43 34 chr2 10428891 10428926 -242827657 - MER46A DNA MER2_type -2672 59 26 2412 89 0 0 chr2 10430622 10430915 -242825668 - AluSc SINE Alu -16 293 1 187 412 11 35 chr2 10431145 10431429 -242825154 + L2 LINE L2 2460 2736 -578 209 319 34 50 chr2 10431478 10431597 -242824986 + L2 LINE L2 3073 3189 -83 2387 98 0 0 chr2 10431789 10432086 -242824497 + AluY SINE Alu 1 297 -14 3939 173 40 12 chr2 10433479 10434301 -242822282 + L1MB7 LINE L1 5321 6165 -19 281 281 99 23 chr2 10436697 10436868 -242819715 - MIR SINE MIR -46 216 33 531 43 0 0 chr2 10437137 10437207 -242819376 + MER41A LTR ERV1 397 466 -88 252 250 31 0 chr2 10437763 10437827 -242818756 + C-rich Low_complexity Low_complexity 4 69 0 22 0 0 0 chr2 10438396 10438418 -242818165 + AT_rich Low_complexity Low_complexity 1 22 0 330 321 132 5 chr2 10438569 10438759 -242817824 + L1MB8 LINE L1 5448 5661 -2147 1679 153 29 4 chr2 10438968 10439249 -242817334 + AluJo SINE Alu 1 288 -24 248 261 87 33 chr2 10439713 10439805 -242816778 + L2 LINE L2 3158 3254 -18 204 381 137 6 chr2 10440757 10441072 -242815511 + L2 LINE L2 2127 2482 -832 290 329 0 12 chr2 10442558 10442643 -242813940 - L2 LINE L2 -9 3304 3221 2548 181 34 27 chr2 10442747 10443044 -242813539 + L1MB8 LINE L1 5522 5816 -362 1861 140 49 6 chr2 10443044 10443372 -242813211 + MER2 DNA MER2_type 2 343 -1 2548 181 34 27 chr2 10443372 10443694 -242812889 + L1MB8 LINE L1 5816 6145 -33 227 224 0 0 chr2 10443697 10443746 -242812837 + L1MB8 LINE L1 6097 6145 -33 226 224 0 0 chr2 10443749 10443798 -242812785 + L1MB8 LINE L1 6097 6145 -33 378 209 0 0 chr2 10443801 10443887 -242812696 + L1MB7 LINE L1 6099 6184 0 381 152 30 0 chr2 10443938 10444004 -242812579 + Tigger2 DNA MER2_type 2 69 -2649 * 1731 146 56 11 chr2 10443990 10444346 -242812237 + Tigger2 DNA MER2_type 2270 2641 -77 1137 120 0 0 chr2 10444483 10444700 -242811883 + (TA)n Simple_repeat Simple_repeat 1 217 0 2299 88 0 7 chr2 10444700 10444994 -242811589 - AluSc SINE Alu -17 292 1 352 203 0 0 chr2 10444997 10445061 -242811522 + Tigger2 DNA MER2_type 2654 2717 -1 181 325 62 12 chr2 10445142 10445222 -242811361 - L2 LINE L2 -14 3258 3175 985 121 143 27 chr2 10445631 10445855 -242810728 - L1MB3 LINE L1 0 6183 5934 1733 131 39 18 chr2 10447540 10447822 -242808761 - AluJo SINE Alu -15 297 10 216 218 0 0 chr2 10449013 10449104 -242807479 + GA-rich Low_complexity Low_complexity 1 91 0 1768 149 21 4 chr2 10449147 10449461 -242807122 + AluJb SINE Alu 1 312 0 181 340 65 75 chr2 10449528 10449807 -242806776 - L2 LINE L2 -674 2640 2365 22 56 0 0 chr2 10450066 10450102 -242806481 + AT_rich Low_complexity Low_complexity 1 36 0 2382 75 3 7 chr2 10450553 10450861 -242805722 - AluSg SINE Alu -3 307 1 557 255 57 0 chr2 10450913 10451070 -242805513 + HAL1 LINE L1 1 166 -2341 312 267 181 36 chr2 10451263 10451484 -242805099 + HAL1 LINE L1 599 851 -1656 497 249 90 37 chr2 10451606 10451795 -242804788 - HAL1 LINE L1 -761 1746 1548 844 276 117 8 chr2 10451811 10452132 -242804451 + HAL1 LINE L1 1771 2142 -365 1643 164 31 31 chr2 10452132 10452425 -242804158 + AluJo SINE Alu 1 293 -19 844 276 117 8 chr2 10452425 10452487 -242804096 + HAL1 LINE L1 2142 2196 -311 230 133 0 22 chr2 10452545 10452590 -242803993 + (GA)n Simple_repeat Simple_repeat 2 45 0 348 280 43 0 chr2 10452590 10452683 -242803900 + HAL1 LINE L1 2334 2430 -77 1574 131 85 4 chr2 10452740 10452999 -242803584 - AluJb SINE Alu -10 302 23 2078 122 0 0 chr2 10453007 10453315 -242803268 - AluSx SINE Alu 0 321 14 24 85 0 0 chr2 10453385 10453444 -242803139 + AT_rich Low_complexity Low_complexity 1 59 0 3339 111 40 32 chr2 10453613 10454136 -242802447 - MER1A DNA MER1_type 0 527 1 199 279 29 15 chr2 10454318 10454386 -242802197 + L2 LINE L2 3245 3313 0 881 162 6 30 chr2 10454397 10454564 -242802019 - FRAM SINE Alu -18 158 1 2711 226 85 31 chr2 10455497 10456449 -242800134 + Tigger6a DNA MER2_type 58 1060 -23 279 324 29 10 chr2 10457213 10457315 -242799268 - MIR3 SINE MIR -54 154 51 280 225 90 9 chr2 10457835 10457946 -242798637 + L1ME4a LINE L1 5735 5854 -267 255 297 74 20 chr2 10458027 10458175 -242798408 + L1ME4a LINE L1 5966 6121 0 2327 92 0 3 chr2 10458481 10458787 -242797796 - AluY SINE Alu -6 305 1 1722 162 18 7 chr2 10458961 10459239 -242797344 + AluJb SINE Alu 7 287 -25 323 192 322 19 chr2 10459388 10459774 -242796809 + LTR50 LTR ERVL 136 736 -59 2028 125 40 15 chr2 10461358 10461687 -242794896 - MER1B DNA MER1_type 0 337 1 678 159 46 26 chr2 10462258 10462409 -242794174 - MER103 DNA DNA -1 165 12 708 295 14 5 chr2 10462433 10462643 -242793940 - MIR SINE MIR -45 217 6 639 213 104 97 chr2 10463555 10463766 -242792817 + MIR SINE MIR 3 216 -46 1788 154 59 0 chr2 10463766 10464052 -242792531 + AluSx SINE Alu 1 303 -9 639 213 104 97 chr2 10464052 10464100 -242792483 + MIR SINE MIR 216 262 0 234 0 0 0 chr2 10465174 10465200 -242791383 + (TTA)n Simple_repeat Simple_repeat 2 27 0 475 200 0 0 chr2 10465200 10465280 -242791303 - FLAM SINE Alu -22 121 42 1110 151 5 15 chr2 10465399 10465605 -242790978 + L1MA8 LINE L1 6083 6286 -5 2227 75 0 42 chr2 10466729 10467036 -242789547 + AluY SINE Alu 1 294 -17 490 210 51 80 chr2 10467238 10467376 -242789207 + L2 LINE L2 3176 3309 -4 488 200 183 8 chr2 10468395 10468515 -242788068 - FLAM_A SINE Alu -1 141 1 1692 149 12 81 chr2 10468925 10469057 -242787526 + AluJo SINE Alu 1 140 -172 2207 114 3 22 chr2 10469057 10469374 -242787209 + AluSx SINE Alu 1 311 -1 1692 149 12 81 chr2 10469374 10469576 -242787007 + AluJo SINE Alu 140 312 0 2023 113 0 4 chr2 10469932 10470206 -242786377 - AluSx SINE Alu -18 294 22 893 162 125 97 chr2 10470232 10470448 -242786135 + AluJo SINE Alu 84 305 -7 210 150 0 0 chr2 10471296 10471336 -242785247 + (TAA)n Simple_repeat Simple_repeat 2 41 0 2228 115 0 0 chr2 10471388 10471683 -242784900 - AluSx SINE Alu -17 295 1 432 155 28 0 chr2 10471745 10471816 -242784767 - AluJ/FRAM SINE Alu -20 292 220 609 258 48 70 chr2 10471827 10472157 -242784426 - MER46C DNA MER2_type -11 327 5 491 281 203 91 chr2 10472993 10473641 -242782942 + HAL1 LINE L1 57 631 -1876 2323 89 30 0 chr2 10473641 10473943 -242782640 - AluSx SINE Alu -1 311 1 491 281 203 91 chr2 10473943 10473973 -242782610 + HAL1 LINE L1 631 656 -1851 2050 154 0 0 chr2 10473973 10474272 -242782311 - AluJb SINE Alu -13 299 1 491 281 203 91 chr2 10474272 10474306 -242782277 + HAL1 LINE L1 656 850 -1657 380 279 236 54 chr2 10474344 10474734 -242781849 - L2 LINE L2 0 3313 2853 1084 210 82 14 chr2 10474758 10475049 -242781534 + L1M4 LINE L1 799 1109 -5433 1166 206 112 17 chr2 10475122 10475463 -242781120 + L1MB7 LINE L1 5725 6117 -67 874 140 0 22 chr2 10475463 10475599 -242780984 - FLAM_A SINE Alu 0 133 1 1166 206 112 17 chr2 10475599 10475674 -242780909 + L1MB7 LINE L1 6117 6184 0 250 257 53 82 chr2 10475690 10475896 -242780687 - L1MC4 LINE L1 -404 7638 7439 234 81 0 0 chr2 10476552 10476589 -242779994 + (TATG)n Simple_repeat Simple_repeat 1 37 0 1766 132 17 38 chr2 10476589 10476876 -242779707 - AluJo SINE Alu -31 281 1 1794 172 10 3 chr2 10478214 10478517 -242778066 - AluSx SINE Alu -7 305 1 1888 178 0 0 chr2 10478739 10479037 -242777546 + AluJo SINE Alu 5 302 -10 937 173 32 5 chr2 10479338 10479523 -242777060 - MER3 DNA MER1_type 0 209 20 230 261 0 0 chr2 10479605 10479670 -242776913 + L1ME4a LINE L1 5755 5819 -1989 213 393 87 0 chr2 10480515 10480698 -242775885 + L2 LINE L2 2645 2843 -471 205 353 147 46 chr2 10480800 10481106 -242775477 + L2 LINE L2 2933 3269 -3 753 132 0 35 chr2 10481241 10481385 -242775198 + L1MC/D LINE L1 5420 5558 -2437 * 754 206 36 10 chr2 10481384 10481578 -242775005 - HAL1 LINE L1 -651 1856 1658 1131 31 0 0 chr2 10481597 10481725 -242774858 - SVA Other Other 0 1386 1259 357 138 0 0 chr2 10481726 10481784 -242774799 + Alu SINE Alu 236 293 -9 494 300 84 58 chr2 10481785 10482095 -242774488 + HAL1 LINE L1 1855 2172 -335 3936 173 32 5 chr2 10482098 10482856 -242773727 + L1MC1 LINE L1 5544 6321 -12 1849 153 10 32 chr2 10483315 10483629 -242772954 + AluJo SINE Alu 1 307 -5 401 277 10 10 chr2 10483679 10483780 -242772803 - L2 LINE L2 -25 3288 3188 2247 75 0 7 chr2 10484832 10485152 -242771431 + AluY SINE Alu 16 311 0 828 136 40 40 chr2 10485164 10485340 -242771243 + L1PA16 LINE L1 5991 6166 0 21 0 0 0 chr2 10485340 10485361 -242771222 + AT_rich Low_complexity Low_complexity 1 21 0 856 201 69 0 chr2 10486216 10486405 -242770178 - MER105 DNA DNA 0 204 3 22 0 0 0 chr2 10486790 10486812 -242769771 + AT_rich Low_complexity Low_complexity 1 22 0 280 261 134 8 chr2 10486891 10487025 -242769558 + L1ME4a LINE L1 5969 6119 -2 992 202 5 11 chr2 10487324 10487512 -242769071 - AluJo SINE Alu -125 187 1 409 322 35 14 chr2 10487641 10487784 -242768799 - MIR SINE MIR -111 151 6 459 289 72 0 chr2 10487785 10487854 -242768729 + MIR3 SINE MIR 34 97 -111 2328 98 0 10 chr2 10487854 10488161 -242768422 + AluY SINE Alu 1 304 -7 459 289 72 0 chr2 10488161 10488243 -242768340 + MIR3 SINE MIR 97 196 -12 2088 80 8 0 chr2 10489141 10489404 -242767179 - AluSp SINE Alu -15 298 34 473 261 33 20 chr2 10489568 10489721 -242766862 - L2 LINE L2 0 3313 3159 881 176 14 0 chr2 10489726 10489874 -242766709 - MER58A DNA MER1_type -36 188 39 820 189 47 115 chr2 10489895 10490233 -242766350 + LTR37A LTR ERV1 40 354 -72 37 0 0 0 chr2 10490236 10490273 -242766310 + AT_rich Low_complexity Low_complexity 1 37 0 801 160 0 8 chr2 10490273 10490392 -242766191 - FLAM_C SINE Alu -15 118 1 318 244 0 0 chr2 10490392 10490474 -242766109 + LTR37A LTR ERV1 345 426 0 570 192 106 0 chr2 10490667 10490771 -242765812 - FLAM_A SINE Alu -20 122 8 32 86 0 0 chr2 10490813 10490894 -242765689 + AT_rich Low_complexity Low_complexity 1 81 0 344 250 0 0 chr2 10491137 10491201 -242765382 - L2 LINE L2 -548 2766 2703 204 40 0 0 chr2 10491213 10491238 -242765345 + (TG)n Simple_repeat Simple_repeat 2 26 0 27 39 0 19 chr2 10491238 10491262 -242765321 + AT_rich Low_complexity Low_complexity 1 24 -27 1879 159 0 10 chr2 10491262 10491551 -242765032 - AluJo SINE Alu -26 286 1 27 39 0 19 chr2 10491551 10491578 -242765005 + AT_rich Low_complexity Low_complexity 24 51 0 1348 268 101 87 chr2 10491579 10492323 -242764260 - L2 LINE L2 -619 2695 1942 1647 152 77 46 chr2 10492393 10492742 -242763841 - MER46B DNA MER2_type 0 236 2 222 283 9 142 chr2 10493089 10493195 -242763388 + L2 LINE L2 3144 3235 -37 1793 147 24 10 chr2 10493318 10493611 -242762972 - AluSx SINE Alu -15 297 1 1666 144 0 118 chr2 10493711 10494050 -242762533 + AluJo SINE Alu 1 299 -3 1931 153 44 0 chr2 10494343 10494637 -242761946 + AluSx SINE Alu 1 307 -5 1740 164 3 14 chr2 10495423 10495709 -242760874 + AluJo SINE Alu 1 283 -29 495 87 0 0 chr2 10495717 10495786 -242760797 + (CGTAA)n Simple_repeat Simple_repeat 3 71 0 2302 100 0 10 chr2 10495907 10496216 -242760367 - AluSg SINE Alu -4 306 1 2269 126 0 0 chr2 10496216 10496526 -242760057 - AluSx SINE Alu -2 310 1 2281 79 0 0 chr2 10496564 10496844 -242759739 + AluY SINE Alu 1 280 -31 207 0 0 0 chr2 10497264 10497287 -242759296 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 987 89 8 0 chr2 10498339 10498462 -242758121 + AluSq/x SINE Alu 14 137 -175 2119 87 15 84 chr2 10498462 10498794 -242757789 + AluSq SINE Alu 1 309 -4 245 324 65 0 chr2 10499037 10499145 -242757438 + L2 LINE L2 2383 2497 -817 234 330 175 19 chr2 10499782 10499988 -242756595 + L2 LINE L2 2593 2830 -484 1911 142 13 7 chr2 10501391 10501693 -242754890 + AluSx SINE Alu 1 304 -8 314 299 110 13 chr2 10502496 10502650 -242753933 - MIR SINE MIR -47 215 47 2331 74 14 3 chr2 10502956 10503252 -242753331 - AluY SINE Alu -12 299 1 339 25 0 0 chr2 10503352 10503392 -242753191 + (CA)n Simple_repeat Simple_repeat 2 41 0 603 171 314 44 chr2 10504753 10505005 -242751578 + MER5C DNA MER1_type 5 324 0 219 280 0 54 chr2 10505380 10505473 -242751110 - MER5B DNA MER1_type -76 102 15 180 292 21 62 chr2 10505387 10505483 -242751100 + MER5A DNA MER1_type 94 185 -4 * 487 261 32 37 chr2 10506184 10506372 -242750211 + L1MC4 LINE L1 7492 7678 -364 263 345 12 30 chr2 10506567 10506735 -242749848 + L1MC4 LINE L1 7860 8024 -18 2389 97 3 0 chr2 10506735 10507043 -242749540 - AluSx SINE Alu -3 309 1 1491 201 18 41 chr2 10507109 10507452 -242749131 - MER58B DNA MER1_type 0 341 7 1466 169 27 37 chr2 10507593 10507889 -242748694 - AluJo SINE Alu -19 293 1 924 182 25 0 chr2 10508036 10508195 -242748388 + FRAM SINE Alu 1 162 -14 1203 170 166 0 chr2 10508773 10509050 -242747533 - MER33 DNA MER1_type 0 324 2 2513 68 0 0 chr2 10509383 10509691 -242746892 + AluSg SINE Alu 1 308 -2 279 320 0 40 chr2 10509696 10509796 -242746787 + MIR SINE MIR 20 115 -147 204 158 0 0 chr2 10509810 10509848 -242746735 + A-rich Low_complexity Low_complexity 1 38 0 2194 118 3 0 chr2 10510337 10510634 -242745949 + AluSx SINE Alu 1 298 -14 190 394 20 10 chr2 10510635 10510734 -242745849 - MER5A DNA MER1_type -54 135 36 283 192 39 0 chr2 10512153 10512205 -242744378 - MIR SINE MIR -63 145 92 1950 140 13 3 chr2 10512351 10512658 -242743925 + AluSx SINE Alu 1 310 -2 342 88 99 11 chr2 10512658 10512749 -242743834 + GA-rich Low_complexity Low_complexity 2 100 0 2057 117 14 0 chr2 10514460 10514750 -242741833 + AluSx SINE Alu 1 294 -18 251 185 56 0 chr2 10515586 10515640 -242740943 - L2 LINE L2 -1 3312 3256 * 323 304 20 10 chr2 10515637 10515739 -242740844 - L2 LINE L2 -3172 142 40 277 289 109 45 chr2 10516007 10516163 -242740420 + MER103 DNA DNA 1 166 0 1047 148 0 6 chr2 10516219 10516381 -242740202 + AluJo SINE Alu 1 161 -151 1601 162 3 56 chr2 10516818 10517121 -242739462 + AluJb SINE Alu 1 287 -25 2033 123 3 7 chr2 10517749 10518041 -242738542 - AluSx SINE Alu -21 291 1 202 270 0 0 chr2 10518334 10518408 -242738175 + A-rich Low_complexity Low_complexity 1 74 0 2297 106 3 0 chr2 10518497 10518798 -242737785 - AluSp SINE Alu -11 302 1 2175 116 3 0 chr2 10518800 10519094 -242737489 - AluSx SINE Alu -17 295 1 28 0 0 0 chr2 10519288 10519316 -242737267 + AT_rich Low_complexity Low_complexity 1 28 0 522 220 61 8 chr2 10519562 10519694 -242736889 + MIR SINE MIR 124 262 0 430 245 19 0 chr2 10519836 10519942 -242736641 + L1ME4a LINE L1 5562 5669 -452 2205 118 3 3 chr2 10520508 10520805 -242735778 + AluSx SINE Alu 1 297 -15 404 247 0 0 chr2 10520866 10520959 -242735624 + L1MC4 LINE L1 7805 7897 -145 2442 56 3 7 chr2 10521092 10521396 -242735187 + AluY SINE Alu 1 303 -8 1018 130 18 18 chr2 10521396 10521565 -242735018 + AluSg/x SINE Alu 132 300 -10 1927 92 78 0 chr2 10521572 10521843 -242734740 + AluSq SINE Alu 1 292 -21 1422 184 25 0 chr2 10521980 10522258 -242734325 - AluJo SINE Alu -27 285 1 185 267 0 67 chr2 10522941 10523016 -242733567 + L2 LINE L2 825 894 -2420 2363 137 9 0 chr2 10523313 10523663 -242732920 - L1PA16 LINE L1 -10 6156 5804 250 147 120 13 chr2 10523696 10523771 -242732812 + L1ME4a LINE L1 5732 5814 -1994 1939 104 85 0 chr2 10523777 10524047 -242732536 - AluSx SINE Alu -19 293 1 438 246 77 8 chr2 10525096 10525226 -242731357 + MIR SINE MIR 112 250 -12 23 0 0 0 chr2 10525250 10525273 -242731310 + AT_rich Low_complexity Low_complexity 1 23 0 618 250 85 0 chr2 10525410 10525574 -242731009 + MIR SINE MIR 57 234 -28 30 0 0 0 chr2 10526201 10526231 -242730352 + AT_rich Low_complexity Low_complexity 1 30 0 442 192 178 14 chr2 10526409 10526503 -242730080 + L1ME4a LINE L1 5930 6007 -114 1323 171 65 52 chr2 10526503 10526812 -242729771 - AluSq SINE Alu 0 313 1 442 192 178 14 chr2 10526812 10526863 -242729720 + L1ME4a LINE L1 6007 6099 -22 188 100 25 0 chr2 10526865 10526905 -242729678 + (TA)n Simple_repeat Simple_repeat 1 41 0 468 77 0 0 chr2 10526905 10526970 -242729613 + (CA)n Simple_repeat Simple_repeat 2 66 0 2229 85 0 4 chr2 10527034 10527353 -242729230 + AluSc SINE Alu 1 318 0 867 176 0 0 chr2 10527354 10527479 -242729104 + FLAM_C SINE Alu 1 125 -8 220 51 26 26 chr2 10527859 10527876 -242728707 + (CAAAA)n Simple_repeat Simple_repeat 2 18 -22 2205 118 0 6 chr2 10527876 10528190 -242728393 + AluSx SINE Alu 1 312 0 220 51 26 26 chr2 10528190 10528211 -242728372 + (CAAAA)n Simple_repeat Simple_repeat 17 40 0 201 74 0 0 chr2 10528823 10528850 -242727733 + (T)n Simple_repeat Simple_repeat 1 27 0 2258 99 3 3 chr2 10529469 10529772 -242726811 + AluSp SINE Alu 1 303 -10 1869 164 0 3 chr2 10530134 10530427 -242726156 + AluSx SINE Alu 1 292 -20 1111 179 0 0 chr2 10531487 10531666 -242724917 + AluJb SINE Alu 129 307 -5 1238 192 157 121 chr2 10531813 10531981 -242724602 + MLT1E2 LTR MaLR 10 170 -456 2150 109 3 0 chr2 10531981 10532287 -242724296 + AluSg SINE Alu 1 307 0 1238 192 157 121 chr2 10532287 10532345 -242724238 + MLT1E2 LTR MaLR 170 224 -402 1707 172 19 25 chr2 10532345 10532659 -242723924 + AluJo SINE Alu 1 312 0 1238 192 157 121 chr2 10532659 10532854 -242723729 + MLT1E2 LTR MaLR 224 436 -190 610 229 114 42 chr2 10532904 10533133 -242723450 + MLT1E2 LTR MaLR 287 623 -3 641 271 127 43 chr2 10533440 10533971 -242722612 + L1MC4a LINE L1 5303 5817 -304 2325 112 0 0 chr2 10534056 10534361 -242722222 - AluSx SINE Alu -7 305 1 2130 130 0 0 chr2 10534363 10534662 -242721921 - AluSx SINE Alu -13 299 1 1985 147 0 7 chr2 10534890 10535196 -242721387 - AluJb SINE Alu -8 304 1 279 0 0 0 chr2 10535263 10535294 -242721289 + (TG)n Simple_repeat Simple_repeat 2 32 0 271 323 96 55 chr2 10536532 10536752 -242719831 + MIR SINE MIR 22 250 -12 1020 195 59 0 chr2 10536756 10536977 -242719606 + MSTB LTR MaLR 1 234 -192 450 140 110 10 chr2 10537194 10537294 -242719289 - MER5A DNA MER1_type -79 110 1 344 247 45 0 chr2 10537741 10537830 -242718753 + MIR SINE MIR 92 184 -78 262 294 71 41 chr2 10539009 10539179 -242717404 + L2 LINE L2 2997 3171 -101 261 98 0 0 chr2 10539233 10539274 -242717309 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 608 246 24 12 chr2 10539345 10539512 -242717071 - MER20 DNA MER1_type -15 204 36 27 29 0 0 chr2 10539898 10539932 -242716651 + AT_rich Low_complexity Low_complexity 1 34 0 401 238 0 10 chr2 10539960 10540061 -242716522 - FLAM_C SINE Alu -7 126 27 1945 108 17 21 chr2 10540236 10540524 -242716059 - AluSg SINE Alu -23 287 1 1075 84 7 14 chr2 10540524 10540666 -242715917 - AluSq/x SINE Alu -172 141 1 654 139 18 96 chr2 10540669 10540796 -242715787 + L1MB3 LINE L1 6029 6164 -19 359 21 21 0 chr2 10540796 10540844 -242715739 + (TG)n Simple_repeat Simple_repeat 2 50 0 2223 101 10 7 chr2 10540848 10541145 -242715438 - AluSx SINE Alu -14 298 1 654 139 18 96 chr2 10541145 10541178 -242715405 + L1MB3 LINE L1 6167 6181 -2 653 237 40 48 chr2 10541277 10541526 -242715057 - MLT1H1 LTR MaLR 0 555 309 423 316 95 13 chr2 10541555 10541792 -242714791 - MLT1H1 LTR MaLR -319 276 26 1738 126 13 32 chr2 10541817 10542126 -242714457 - AluY SINE Alu -8 303 1 564 144 14 50 chr2 10542581 10542720 -242713863 + AluJb SINE Alu 162 295 -17 375 209 6 122 chr2 10542767 10542939 -242713644 + Charlie7 DNA MER1_type 317 468 -2144 1978 250 67 46 chr2 10542956 10543672 -242712911 + MER21B LTR ERV1 22 752 -111 367 284 79 64 chr2 10543709 10544037 -242712546 + Charlie7 DNA MER1_type 527 859 -1753 247 132 23 120 chr2 10544594 10544721 -242711862 - FLAM SINE Alu -25 108 44 233 222 0 0 chr2 10545190 10545235 -242711348 - MIR3 SINE MIR -52 156 112 2017 127 28 3 chr2 10545524 10545815 -242710768 + AluSx SINE Alu 1 298 -14 2454 80 3 10 chr2 10545820 10546131 -242710452 + AluSq SINE Alu 5 313 0 1880 120 6 70 chr2 10546678 10546994 -242709589 - AluJb SINE Alu -16 296 1 2480 50 6 44 chr2 10547283 10547603 -242708980 + AluY SINE Alu 1 308 -3 2187 112 7 0 chr2 10547614 10547908 -242708675 + AluY SINE Alu 1 296 -15 1547 254 81 5 chr2 10547963 10548384 -242708199 + MLT1J LTR MaLR 1 453 -58 205 239 28 113 chr2 10548460 10548602 -242707981 - MIR SINE MIR -11 251 122 334 268 52 0 chr2 10549253 10549350 -242707233 + L3 LINE CR1 1377 1478 -99 593 269 88 0 chr2 10550219 10550390 -242706193 + MIR SINE MIR 77 262 0 315 243 72 36 chr2 10553398 10553509 -242703074 + MIR SINE MIR 65 179 -83 2110 112 14 0 chr2 10553735 10554030 -242702553 + AluSg SINE Alu 1 299 -11 2350 98 0 7 chr2 10554652 10554958 -242701625 + AluSq SINE Alu 1 304 -9 841 169 0 8 chr2 10555369 10555499 -242701084 + FLAM_C SINE Alu 1 129 -14 262 67 44 0 chr2 10555605 10555650 -242700933 + GA-rich Low_complexity Low_complexity 1 47 0 470 149 44 70 chr2 10555652 10555685 -242700898 + MER3 DNA MER1_type 98 130 -79 1021 175 171 52 chr2 10555685 10555820 -242700763 - AluJo SINE Alu 0 302 184 2396 100 3 0 chr2 10555820 10556120 -242700463 - AluSp SINE Alu -12 301 1 1021 175 171 52 chr2 10556120 10556253 -242700330 - AluJo SINE Alu -118 184 2 470 149 44 70 chr2 10556253 10556333 -242700250 + MER3 DNA MER1_type 130 208 -1 251 229 0 0 chr2 10556293 10556341 -242700242 - MER3 DNA MER1_type -121 88 41 * 1820 165 7 11 chr2 10556853 10557138 -242699445 + AluJo SINE Alu 8 291 -21 180 0 0 0 chr2 10557216 10557236 -242699347 + (TG)n Simple_repeat Simple_repeat 1 20 0 1276 148 0 5 chr2 10557403 10557599 -242698984 - AluJb SINE Alu -1 311 117 285 127 0 0 chr2 10557611 10557666 -242698917 - Alu SINE Alu -1 301 247 1795 123 0 4 chr2 10557673 10557925 -242698658 + AluSx SINE Alu 62 312 0 787 193 7 7 chr2 10558676 10558821 -242697762 + MER45A DNA AcHobo 34 178 0 352 383 61 7 chr2 10559013 10559290 -242697293 - L2 LINE L2 -572 2742 2451 1425 238 35 33 chr2 10559401 10559581 -242697002 + L1M4 LINE L1 4521 4699 -1447 2408 93 0 3 chr2 10559581 10559892 -242696691 + AluSx SINE Alu 1 310 -2 1425 238 35 33 chr2 10559892 10560194 -242696389 + L1M4 LINE L1 4699 5004 -1142 1235 153 5 63 chr2 10560194 10560416 -242696167 + AluSx SINE Alu 1 209 -103 25 31 0 0 chr2 10560616 10560648 -242695935 + AT_rich Low_complexity Low_complexity 1 32 0 775 152 0 15 chr2 10560648 10560780 -242695803 - FLAM_C SINE Alu -3 130 1 230 30 0 0 chr2 10560780 10560813 -242695770 + L1PA12 LINE L1 6134 6166 -2 1532 184 3 63 chr2 10560815 10561149 -242695434 + AluJo SINE Alu 1 312 0 944 178 0 30 chr2 10561312 10561481 -242695102 + AluJb SINE Alu 124 287 -25 1869 167 17 3 chr2 10561492 10561791 -242694792 + AluJb SINE Alu 1 303 -9 637 206 84 0 chr2 10561808 10561966 -242694617 - MER3 DNA MER1_type -51 158 1 524 263 159 6 chr2 10562008 10562335 -242694248 - L2 LINE L2 -2795 519 143 318 145 0 105 chr2 10562453 10562470 -242694113 - L1MC4 LINE L1 0 8042 8025 2148 151 0 3 chr2 10562470 10562782 -242693801 - AluJb SINE Alu -1 311 1 318 145 0 105 chr2 10562782 10562840 -242693743 - L1MC4 LINE L1 -17 8025 7975 1023 250 12 19 chr2 10563009 10563166 -242693417 - L1MC4a LINE L1 -1042 6766 6610 186 43 0 0 chr2 10563166 10563189 -242693394 + (TC)n Simple_repeat Simple_repeat 2 24 0 1023 250 12 19 chr2 10563189 10563287 -242693296 - L1MC4a LINE L1 -1198 6610 6513 1627 184 7 7 chr2 10563295 10563573 -242693010 - AluJo SINE Alu -12 300 23 2097 119 10 26 chr2 10563583 10563894 -242692689 - AluSq SINE Alu -7 306 1 2024 146 13 0 chr2 10563995 10564296 -242692287 - AluJb SINE Alu -7 305 1 1924 155 14 0 chr2 10564739 10565030 -242691553 + AluJb SINE Alu 1 295 -17 2425 84 3 3 chr2 10565035 10565334 -242691249 + AluSp SINE Alu 1 299 -14 2141 143 0 0 chr2 10565572 10565865 -242690718 + AluSx SINE Alu 1 293 -19 1769 161 7 4 chr2 10566134 10566414 -242690169 - AluJb SINE Alu -31 281 1 368 289 48 54 chr2 10566414 10566580 -242690003 + L1ME4a LINE L1 5912 6076 -45 1570 124 5 0 chr2 10566581 10566791 -242689792 + AluSx SINE Alu 58 268 -44 2501 78 7 0 chr2 10566902 10567208 -242689375 + AluSc SINE Alu 1 308 -1 258 321 74 26 chr2 10568725 10568915 -242687668 - MIR3 SINE MIR -7 201 3 1241 179 0 5 chr2 10569099 10569311 -242687272 + AluJb SINE Alu 87 297 -15 405 164 37 60 chr2 10569314 10569391 -242687192 + Charlie5 DNA MER1_type 2455 2529 -56 2145 119 0 10 chr2 10569391 10569684 -242686899 - AluSx SINE Alu -22 290 1 405 164 37 60 chr2 10569684 10569740 -242686843 + Charlie5 DNA MER1_type 2529 2585 0 1668 139 56 40 chr2 10569797 10570100 -242686483 - AluJo SINE Alu -4 308 1 482 208 10 0 chr2 10570124 10570220 -242686363 - MER5A DNA MER1_type -80 109 13 931 213 11 0 chr2 10570250 10570433 -242686150 - MER5A DNA MER1_type -4 185 1 757 272 117 29 chr2 10570695 10571037 -242685546 - L1M4 LINE L1 -2882 3264 2893 1330 171 0 9 chr2 10571040 10571251 -242685332 - AluJo SINE Alu -94 218 10 208 130 0 65 chr2 10571281 10571327 -242685256 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 543 100 12 0 chr2 10571345 10571425 -242685158 + AluJ/FLAM SINE Alu 2 82 -230 1057 138 66 0 chr2 10571532 10571713 -242684870 + AluY SINE Alu 119 311 0 355 333 53 15 chr2 10571727 10571859 -242684724 - L1M4 LINE L1 -3372 2774 2638 2055 130 10 13 chr2 10571954 10572255 -242684328 - AluSx SINE Alu -12 300 1 525 233 131 45 chr2 10573143 10573320 -242683263 + L2 LINE L2 2509 2715 -599 1878 74 0 4 chr2 10573320 10573573 -242683010 + AluSp SINE Alu 57 308 0 525 233 131 45 chr2 10573573 10573639 -242682944 + L2 LINE L2 2715 2774 -540 2143 105 48 7 chr2 10574082 10574377 -242682206 + AluSx SINE Alu 1 307 -5 286 273 11 11 chr2 10574382 10574470 -242682113 - L1ME LINE L1 -476 5645 5558 273 242 11 21 chr2 10574540 10574635 -242681948 - L1ME LINE L1 -2379 5429 5336 2349 97 0 3 chr2 10574951 10575251 -242681332 - AluSx SINE Alu -13 299 1 194 245 19 0 chr2 10575948 10576001 -242680582 + MIR SINE MIR 85 138 -124 447 68 0 0 chr2 10576137 10576196 -242680387 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 2051 118 4 0 chr2 10576196 10576468 -242680115 - AluSx SINE Alu -33 279 7 662 181 241 0 chr2 10577387 10577520 -242679063 - AluJo SINE Alu -18 294 194 195 69 0 0 chr2 10577520 10577549 -242679034 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 662 181 241 0 chr2 10577549 10577581 -242679002 - AluJo SINE Alu -118 194 89 1981 121 0 48 chr2 10577750 10578064 -242678519 + AluSg SINE Alu 1 299 -11 2256 113 17 0 chr2 10578067 10578367 -242678216 + AluSp SINE Alu 1 305 -8 1164 124 12 0 chr2 10578371 10578540 -242678043 + FRAM SINE Alu 1 170 -6 1219 214 98 14 chr2 10578541 10578968 -242677615 + L1ME3A LINE L1 5200 5667 -503 2387 110 0 0 chr2 10578971 10579279 -242677304 + AluSg SINE Alu 1 308 -2 819 164 8 8 chr2 10579319 10579447 -242677136 + FAM SINE Alu 6 133 -52 28 0 0 0 chr2 10579451 10579479 -242677104 + AT_rich Low_complexity Low_complexity 1 28 0 2207 126 7 3 chr2 10579490 10579800 -242676783 + AluSp SINE Alu 3 313 0 734 258 132 85 chr2 10579802 10580271 -242676312 + L1ME3A LINE L1 5652 6142 -28 2283 115 0 0 chr2 10580304 10580599 -242675984 - AluSq SINE Alu -18 295 1 1530 155 73 43 chr2 10580599 10580917 -242675666 - L1MC1 LINE L1 -8 6325 5995 2079 97 0 0 chr2 10580937 10581216 -242675367 - AluSx SINE Alu 0 301 23 211 343 29 64 chr2 10581792 10581914 -242674669 + L2 LINE L2 2891 3016 -297 2306 122 0 0 chr2 10581914 10582218 -242674365 + AluSq SINE Alu 1 304 -9 211 343 29 64 chr2 10582218 10582300 -242674283 + L2 LINE L2 3016 3099 -214 593 165 55 16 chr2 10582300 10582427 -242674156 - FLAM_C SINE Alu -1 132 1 211 343 29 64 chr2 10582427 10582597 -242673986 + L2 LINE L2 3099 3253 -60 1251 176 173 4 chr2 10582994 10583249 -242673334 + AluSx SINE Alu 1 298 -14 238 322 75 4 chr2 10583403 10583630 -242672953 - L2 LINE L2 -2391 923 681 185 94 31 0 chr2 10583711 10583743 -242672840 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2361 96 3 10 chr2 10584734 10585048 -242671535 + AluSx SINE Alu 1 312 0 2306 104 0 0 chr2 10585414 10585712 -242670871 + AluSx SINE Alu 1 298 -14 348 239 159 11 chr2 10585746 10585834 -242670749 - AluSg SINE Alu -176 124 24 235 213 172 0 chr2 10585840 10585962 -242670621 - L1ME LINE L1 -270 5851 5709 541 290 67 40 chr2 10586245 10586469 -242670114 - MIR SINE MIR -20 242 13 2094 104 8 0 chr2 10586959 10587227 -242669356 + AluSx SINE Alu 22 291 -21 995 102 0 0 chr2 10587243 10587398 -242669185 + AluSg/x SINE Alu 157 311 0 379 257 95 0 chr2 10587479 10587584 -242668999 + MIR SINE MIR 32 146 -62 259 366 0 0 chr2 10588116 10588209 -242668374 - MIR SINE MIR -73 189 97 395 300 147 21 chr2 10589236 10589426 -242667157 + L1ME4a LINE L1 5880 6093 -28 2113 150 0 10 chr2 10589696 10589874 -242666709 - AluSx SINE Alu -1 311 136 2614 43 0 3 chr2 10589874 10590173 -242666410 - AluY SINE Alu -13 298 1 2113 150 0 10 chr2 10590173 10590308 -242666275 - AluSx SINE Alu -176 136 1 240 59 0 0 chr2 10590386 10590420 -242666163 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 2276 95 14 0 chr2 10590421 10590717 -242665866 - AluSp SINE Alu -12 301 2 367 285 39 31 chr2 10590918 10591048 -242665535 + MIR3 SINE MIR 15 145 -63 28 79 0 0 chr2 10592431 10592494 -242664089 + GC_rich Low_complexity Low_complexity 1 63 0 2548 59 3 3 chr2 10594324 10594627 -242661956 + AluY SINE Alu 1 303 -8 1497 77 0 0 chr2 10594648 10594829 -242661754 - AluSx SINE Alu -131 181 1 700 139 0 9 chr2 10595392 10595500 -242661083 + AluSq/x SINE Alu 27 133 -179 2194 103 7 3 chr2 10595504 10595804 -242660779 + AluSp SINE Alu 1 301 -12 568 204 10 0 chr2 10596638 10596741 -242659842 + FLAM_A SINE Alu 2 105 -37 309 109 0 0 chr2 10596741 10596787 -242659796 + (TCCC)n Simple_repeat Simple_repeat 1 46 0 2067 135 0 3 chr2 10596787 10597076 -242659507 - AluSx SINE Alu -24 288 1 1114 196 0 20 chr2 10597079 10597278 -242659305 + AluJo SINE Alu 105 299 -13 1619 117 0 22 chr2 10597322 10597552 -242659031 + AluSq SINE Alu 1 225 -88 494 189 42 0 chr2 10597652 10597747 -242658836 + AluSg/x SINE Alu 209 307 -3 476 61 122 0 chr2 10597752 10597850 -242658733 + GA-rich Low_complexity Low_complexity 4 113 0 243 279 177 0 chr2 10597931 10598010 -242658573 + MIR SINE MIR 58 150 -112 2069 229 49 20 chr2 10598432 10599040 -242657543 + L1ME2 LINE L1 5519 6144 -20 262 268 17 82 chr2 10599098 10599329 -242657254 + L1MC4 LINE L1 7826 8041 -1 2055 143 3 3 chr2 10599845 10600145 -242656438 - AluJb SINE Alu -12 300 1 2179 118 7 0 chr2 10600241 10600528 -242656055 - AluSg SINE Alu -21 289 1 1598 225 80 19 chr2 10600952 10601379 -242655204 + LTR40c LTR ERVL 1 453 -12 2381 75 20 10 chr2 10601442 10601737 -242654846 + AluSp SINE Alu 1 298 -15 792 189 0 0 chr2 10601745 10601877 -242654706 + FLAM_C SINE Alu 2 133 0 713 247 11 29 chr2 10602272 10602446 -242654137 - FRAM SINE Alu -7 169 1 1701 93 97 69 chr2 10602684 10602973 -242653610 + AluSg SINE Alu 1 297 -13 2178 253 127 45 chr2 10603144 10603237 -242653346 - L2 LINE L2 -4 3309 3225 1539 168 54 27 chr2 10603237 10603535 -242653048 + AluJb SINE Alu 1 306 -6 2178 253 127 45 chr2 10603535 10604504 -242652079 - L2 LINE L2 -88 3225 2164 287 315 130 0 chr2 10604511 10604619 -242651964 + L3 LINE CR1 989 1110 -467 1410 296 124 42 chr2 10604655 10605122 -242651461 + L2 LINE L2 1835 2262 -1051 1788 93 42 0 chr2 10605122 10605359 -242651224 + AluSc SINE Alu 1 247 -62 1410 296 124 42 chr2 10605359 10606247 -242650336 + L2 LINE L2 2262 3312 -1 496 299 132 37 chr2 10606234 10606559 -242650024 + L3 LINE CR1 1133 1488 -89 * 185 274 0 39 chr2 10606579 10606630 -242649953 + MIR SINE MIR 78 126 -82 255 339 156 0 chr2 10606762 10606871 -242649712 + L2 LINE L2 3177 3302 -11 2533 65 0 7 chr2 10607577 10607886 -242648697 + AluSx SINE Alu 1 307 -5 2502 81 0 0 chr2 10608099 10608406 -242648177 + AluSx SINE Alu 1 307 -5 181 255 20 20 chr2 10608775 10608826 -242647757 + L2 LINE L2 3248 3298 -15 1673 187 26 10 chr2 10608987 10609292 -242647291 + 7SLRNA srpRNA srpRNA 5 314 -6 945 226 88 9 chr2 10609292 10609509 -242647074 + MIR SINE MIR 22 255 -7 908 136 97 24 chr2 10609578 10609784 -242646799 - L1MB8 LINE L1 -1 6177 5957 825 205 58 0 chr2 10609813 10609969 -242646614 - AluJo SINE Alu -39 273 109 930 157 0 7 chr2 10609971 10610118 -242646465 - MER46A DNA MER2_type -90 146 1 384 115 4 4 chr2 10610120 10610176 -242646407 - MLT1A1 LTR MaLR -216 158 99 2377 97 0 3 chr2 10610176 10610486 -242646097 + AluSg SINE Alu 1 309 -1 2233 125 0 0 chr2 10610494 10610791 -242645792 + AluSq SINE Alu 1 297 -16 2135 105 0 74 chr2 10610791 10611115 -242645468 + AluSc SINE Alu 1 300 -9 300 259 56 37 chr2 10611210 10611318 -242645265 + MIR SINE MIR 151 260 -2 1516 168 7 45 chr2 10611611 10611739 -242644844 + AluJo SINE Alu 13 144 -168 2228 102 13 7 chr2 10611739 10612069 -242644514 + AluSq SINE Alu 1 332 0 1516 168 7 45 chr2 10612069 10612230 -242644353 + AluJo SINE Alu 144 293 -19 327 103 17 35 chr2 10612230 10612288 -242644295 + U7 snRNA snRNA 7 63 0 235 307 11 23 chr2 10612299 10612387 -242644196 - L1ME LINE L1 -527 5594 5508 2529 77 0 6 chr2 10612696 10613007 -242643576 - AluSc SINE Alu 0 309 1 2199 108 30 7 chr2 10613071 10613376 -242643207 - AluSq SINE Alu -1 312 1 1980 180 33 19 chr2 10613382 10613397 -242643186 - L1MB3 LINE L1 -37 6146 6133 2057 110 50 0 chr2 10613397 10613679 -242642904 - AluSx SINE Alu -16 296 1 1980 180 33 19 chr2 10613679 10614086 -242642497 - L1MB3 LINE L1 -50 6133 5718 1722 121 0 0 chr2 10614114 10614338 -242642245 - AluSx SINE Alu -88 224 1 2090 139 3 3 chr2 10614365 10614748 -242641835 - AluSc SINE Alu 0 383 1 1596 241 53 80 chr2 10614966 10615025 -242641558 - L1MC4 LINE L1 -2 8040 7981 2339 113 3 0 chr2 10615025 10615335 -242641248 + AluSp SINE Alu 1 311 -2 1596 241 53 80 chr2 10615335 10615617 -242640966 - L1MC4 LINE L1 -61 7981 7693 771 187 0 22 chr2 10615617 10615751 -242640832 + FLAM_A SINE Alu 1 131 -2 1596 241 53 80 chr2 10615751 10615888 -242640695 - L1MC4 LINE L1 -349 7693 7554 1859 124 3 107 chr2 10615888 10616234 -242640349 - AluY SINE Alu -1 310 1 1596 241 53 80 chr2 10616234 10616467 -242640116 - L1MC4 LINE L1 -488 7554 7346 392 159 62 53 chr2 10616477 10616590 -242639993 - L1ME2 LINE L1 0 6164 6051 191 347 92 10 chr2 10616749 10616847 -242639736 + MIR SINE MIR 45 150 -58 2303 111 3 3 chr2 10616886 10617192 -242639391 + AluSq SINE Alu 1 306 -7 25 51 0 0 chr2 10617210 10617249 -242639334 + AT_rich Low_complexity Low_complexity 1 39 0 880 156 0 0 chr2 10617251 10617379 -242639204 + FLAM_C SINE Alu 1 128 -5 816 248 64 67 chr2 10617399 10617742 -242638841 + L1ME4a LINE L1 5311 5652 -469 396 316 158 34 chr2 10617811 10618077 -242638506 + L1ME4a LINE L1 5634 5906 -215 2104 141 3 0 chr2 10618279 10618584 -242637999 + AluJb SINE Alu 7 312 0 345 218 64 0 chr2 10618697 10618775 -242637808 - L2 LINE L2 0 3272 3190 304 253 181 0 chr2 10618865 10618948 -242637635 + L2 LINE L2 3189 3286 -27 189 245 0 57 chr2 10618996 10619049 -242637534 + L2 LINE L2 3263 3312 -1 236 240 125 60 chr2 10619064 10619264 -242637319 - LTR33 LTR ERVL -6 515 303 220 161 57 218 chr2 10619418 10619542 -242637041 - MIR SINE MIR -86 176 73 405 248 110 9 chr2 10619695 10619804 -242636779 + MIR SINE MIR 93 212 -50 898 143 0 0 chr2 10619864 10619990 -242636593 + AluJ SINE Alu 1 126 -176 684 183 8 38 chr2 10619998 10620129 -242636454 + AluJ SINE Alu 183 309 -3 275 293 63 103 chr2 10620656 10620752 -242635831 - MIR SINE MIR -75 187 100 2374 115 0 0 chr2 10620752 10621064 -242635519 + AluSx SINE Alu 1 312 0 275 293 63 103 chr2 10621064 10621141 -242635442 - MIR SINE MIR -162 100 21 906 271 35 48 chr2 10621268 10621571 -242635012 - L1ME4a LINE L1 -208 5913 5615 2323 73 3 20 chr2 10621571 10621872 -242634711 - AluSc SINE Alu -13 296 1 906 271 35 48 chr2 10621872 10621966 -242634617 - L1ME4a LINE L1 -506 5615 5521 2184 127 10 0 chr2 10622257 10622564 -242634019 - AluSx SINE Alu -2 310 1 2198 74 7 21 chr2 10622581 10622915 -242633668 - AluY SINE Alu 0 330 1 1484 161 48 48 chr2 10622923 10623067 -242633516 - AluJo SINE Alu -21 291 148 2154 85 3 62 chr2 10623067 10623374 -242633209 - AluSp SINE Alu -24 289 1 1484 161 48 48 chr2 10623374 10623520 -242633063 - AluJo SINE Alu -163 149 1 2218 110 0 13 chr2 10624119 10624420 -242632163 + AluSx SINE Alu 7 303 -9 924 152 226 17 chr2 10624423 10624478 -242632105 + Tigger3(Golem) DNA MER2_type 2761 2803 -235 2180 100 11 0 chr2 10624478 10624780 -242631803 + AluSq SINE Alu 2 306 0 924 152 226 17 chr2 10624780 10624953 -242631630 + Tigger3(Golem) DNA MER2_type 2803 3038 0 21 82 0 0 chr2 10624966 10625015 -242631568 + AT_rich Low_complexity Low_complexity 1 49 0 1359 233 10 0 chr2 10625043 10625352 -242631231 - AluSq SINE Alu -1 312 1 2242 99 13 0 chr2 10625496 10625799 -242630784 - AluSx SINE Alu -5 307 1 729 183 0 0 chr2 10626966 10627086 -242629497 + FAM SINE Alu 40 159 -26 234 0 0 0 chr2 10627086 10627112 -242629471 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2193 104 7 19 chr2 10627144 10627452 -242629131 - AluSc SINE Alu -5 304 1 327 70 0 0 chr2 10628181 10628224 -242628359 + Alu SINE Alu 1 43 -260 331 330 26 9 chr2 10628319 10628434 -242628149 - MIR SINE MIR -144 118 2 204 111 0 0 chr2 10628501 10628537 -242628046 + (T)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr2 10628538 10628568 -242628015 + AT_rich Low_complexity Low_complexity 1 30 0 2164 102 17 3 chr2 10628577 10628871 -242627712 + AluSx SINE Alu 1 298 -14 216 258 196 21 chr2 10629077 10629174 -242627409 - L2 LINE L2 -14 3258 3145 360 264 44 0 chr2 10629444 10629535 -242627048 - L2 LINE L2 -17 3255 3161 499 203 168 98 chr2 10630029 10630285 -242626298 - MLT1B LTR MaLR 0 390 117 232 159 23 0 chr2 10630549 10630593 -242625990 + MIR SINE MIR 111 155 -107 2327 101 0 0 chr2 10630617 10630913 -242625670 - AluSg SINE Alu -13 297 2 2212 104 0 23 chr2 10633157 10633456 -242623127 + AluSg SINE Alu 1 292 -18 387 277 22 82 chr2 10634795 10634969 -242621614 - MIR SINE MIR -40 168 2 21 36 0 0 chr2 10635062 10635090 -242621493 + AT_rich Low_complexity Low_complexity 1 28 0 309 173 0 0 chr2 10635092 10635144 -242621439 + L1MD2 LINE L1 6183 6234 -125 323 209 0 114 chr2 10635149 10635350 -242621233 + (TATAG)n Simple_repeat Simple_repeat 3 180 0 466 192 48 0 chr2 10635398 10635502 -242621081 + L1MD2 LINE L1 6251 6359 0 21 0 0 0 chr2 10635592 10635613 -242620970 + AT_rich Low_complexity Low_complexity 1 21 0 1988 153 0 7 chr2 10635616 10635917 -242620666 - AluSx SINE Alu 0 312 14 2322 113 0 0 chr2 10635924 10636225 -242620358 - AluSx SINE Alu -11 301 1 57 61 0 0 chr2 10636229 10636328 -242620255 + AT_rich Low_complexity Low_complexity 1 99 0 209 318 238 14 chr2 10637667 10637890 -242618693 + L3 LINE CR1 1200 1472 -105 2132 132 13 0 chr2 10637890 10638194 -242618389 + AluSx SINE Alu 1 308 -4 2309 96 3 0 chr2 10638584 10638876 -242617707 + AluSp SINE Alu 1 293 -20 229 294 47 35 chr2 10639288 10639373 -242617210 - L2 LINE L2 -33 3239 3154 339 225 232 0 chr2 10640608 10640746 -242615837 - MIR SINE MIR -12 250 81 2153 115 0 0 chr2 10641852 10642147 -242614436 - AluSx SINE Alu -17 295 1 200 242 116 32 chr2 10643774 10643869 -242612714 - MIR SINE MIR -52 210 108 201 213 0 0 chr2 10644731 10644778 -242611805 + (TG)n Simple_repeat Simple_repeat 1 47 0 1832 115 17 20 chr2 10646688 10646983 -242609600 - AluSq SINE Alu -14 299 6 2041 121 3 16 chr2 10649513 10649826 -242606757 - AluSq SINE Alu -4 309 1 282 56 0 0 chr2 10649846 10649882 -242606701 + (TA)n Simple_repeat Simple_repeat 2 37 0 1549 111 9 0 chr2 10649899 10650125 -242606458 + AluSq SINE Alu 79 306 -7 2189 81 7 7 chr2 10651167 10651462 -242605121 - AluSx SINE Alu -16 296 2 1090 100 0 19 chr2 10651742 10651902 -242604681 + AluSg/x SINE Alu 130 286 -24 1215 101 0 17 chr2 10652256 10652434 -242604149 + AluSg/x SINE Alu 130 304 -6 1024 121 54 24 chr2 10653374 10653481 -242603102 + AluSx SINE Alu 21 136 -176 2264 103 0 10 chr2 10653481 10653791 -242602792 + AluSc SINE Alu 1 307 -2 1024 121 54 24 chr2 10653791 10653849 -242602734 + AluSx SINE Alu 136 191 -121 1574 156 48 4 chr2 10656653 10656923 -242599660 - AluSx SINE Alu -18 294 13 638 87 109 0 chr2 10657023 10657115 -242599468 + AluSx SINE Alu 181 282 -30 253 208 0 0 chr2 10657765 10657813 -242598770 - MER91 DNA MER1_type 0 190 143 2210 115 0 3 chr2 10658585 10658898 -242597685 + AluSx SINE Alu 1 312 0 1411 98 0 5 chr2 10659175 10659369 -242597214 + AluSq SINE Alu 1 193 -120 194 260 40 0 chr2 10660023 10660073 -242596510 + MIR SINE MIR 31 82 -180 495 213 125 7 chr2 10660129 10660210 -242596373 + MIR SINE MIR 111 181 -81 231 61 0 0 chr2 10660210 10660243 -242596340 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 495 213 125 7 chr2 10660243 10660297 -242596286 + MIR SINE MIR 181 262 0 1967 117 32 0 chr2 10660783 10661066 -242595517 - AluSx SINE Alu -12 300 9 1404 159 13 0 chr2 10661653 10661892 -242594691 - AluJb SINE Alu -13 299 58 1696 178 0 7 chr2 10661939 10662248 -242594335 - AluSx SINE Alu 0 307 1 762 151 0 0 chr2 10664205 10664324 -242592259 - AluSx SINE Alu 0 312 194 1060 113 0 0 chr2 10664325 10664466 -242592117 - AluSx SINE Alu -171 141 1 1750 127 7 7 chr2 10664956 10665231 -242591352 + AluSx SINE Alu 9 283 -29 23 33 0 0 chr2 10665570 10665600 -242590983 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10665805 10665831 -242590752 + GC_rich Low_complexity Low_complexity 1 26 0 257 254 55 55 chr2 10666370 10666480 -242590103 + MER69 DNA AcHobo 32 141 -1085 700 177 8 0 chr2 10666498 10666622 -242589961 - FRAM SINE Alu -54 122 1 1405 108 0 0 chr2 10666630 10666824 -242589759 - AluSp SINE Alu -13 300 107 1470 103 0 0 chr2 10666824 10667019 -242589564 - AluSp SINE Alu -118 195 1 282 222 48 0 chr2 10667020 10667083 -242589500 + MER69 DNA AcHobo 132 197 -1029 180 225 0 0 chr2 10667200 10667240 -242589343 - L2 LINE L2 -227 3045 3006 1289 171 3 71 chr2 10668422 10668479 -242588104 - L1MB4 LINE L1 0 6180 6121 371 150 17 0 chr2 10668479 10668539 -242588044 - U7 snRNA snRNA 0 63 3 2142 98 10 3 chr2 10668543 10668839 -242587744 - AluSx SINE Alu -14 298 1 1289 171 3 71 chr2 10668839 10669066 -242587517 - L1MB4 LINE L1 -62 6118 5911 2194 99 3 13 chr2 10669066 10669380 -242587203 - AluSq SINE Alu -2 311 1 1289 171 3 71 chr2 10669380 10669398 -242587185 - L1MB4 LINE L1 -269 5911 5893 435 289 4 83 chr2 10669427 10669693 -242586890 - L1MC4 LINE L1 -371 7671 7427 265 272 102 39 chr2 10670698 10670904 -242585679 + MLT1J1 LTR MaLR 228 446 0 2260 174 33 8 chr2 10671118 10671161 -242585422 - L1MB3 LINE L1 -12 6159 6119 1838 140 7 20 chr2 10671161 10671461 -242585122 - AluJb SINE Alu -16 296 1 2260 174 33 8 chr2 10671461 10671476 -242585107 - L1MB3 LINE L1 -52 6119 6106 1888 126 7 11 chr2 10671476 10671817 -242584766 - AluSp SINE Alu 0 340 1 2260 174 33 8 chr2 10671817 10672231 -242584352 - L1MB3 LINE L1 -65 6106 5711 1779 219 82 13 chr2 10672490 10672941 -242583642 + LTR65 LTR ERV1 167 648 -21 294 284 42 21 chr2 10672958 10673053 -242583530 - MIR SINE MIR -60 202 106 1507 243 43 102 chr2 10673063 10673713 -242582870 - LTR9 LTR ERV1 0 612 1 479 259 98 51 chr2 10673725 10673961 -242582622 - MLT1G1 LTR MaLR -163 432 186 270 263 25 12 chr2 10673988 10674068 -242582515 - MLT1G1 LTR MaLR -500 90 10 240 353 111 24 chr2 10674083 10674372 -242582211 + L2 LINE L2 2959 3272 0 1903 158 3 0 chr2 10674626 10674918 -242581665 - AluJb SINE Alu -19 293 1 22 0 0 0 chr2 10674929 10674951 -242581632 + AT_rich Low_complexity Low_complexity 1 22 0 1883 138 25 0 chr2 10674951 10675233 -242581350 - AluJb SINE Alu -23 289 1 207 0 0 0 chr2 10675243 10675266 -242581317 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2335 62 0 0 chr2 10675268 10675556 -242581027 - AluY SINE Alu -23 288 1 366 299 120 37 chr2 10676465 10676682 -242579901 + L2 LINE L2 2396 2630 -684 1063 323 41 31 chr2 10676706 10677124 -242579459 + LTR16A LTR ERVL 1 422 -28 370 358 74 6 chr2 10677158 10677320 -242579263 + LTR16A LTR ERVL 16 188 -262 251 231 0 0 chr2 10677416 10677468 -242579115 + MLT1K LTR MaLR 177 228 -360 470 315 165 9 chr2 10677498 10677819 -242578764 + MLT1K LTR MaLR 184 554 -34 2915 127 36 18 chr2 10677850 10678351 -242578232 + MLT2A1 LTR ERVL 1 519 -1 3392 185 28 6 chr2 10678453 10679306 -242577277 + L1MB8 LINE L1 5117 5992 -186 558 132 0 97 chr2 10679315 10679363 -242577220 + L1MB8 LINE L1 6073 6105 -73 2144 103 10 0 chr2 10679363 10679654 -242576929 - AluSq SINE Alu -19 294 1 558 132 0 97 chr2 10679654 10679719 -242576864 + L1MB8 LINE L1 6105 6175 -3 373 285 201 53 chr2 10679799 10680074 -242576509 + L2 LINE L2 2830 3063 -250 2055 117 3 0 chr2 10680074 10680357 -242576226 - AluSx SINE Alu -28 284 1 373 285 201 53 chr2 10680357 10680498 -242576085 + L2 LINE L2 3063 3308 -5 2115 129 0 0 chr2 10680536 10680831 -242575752 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr2 10680892 10680914 -242575669 + AT_rich Low_complexity Low_complexity 1 22 0 1878 143 26 32 chr2 10680930 10681272 -242575311 - L1MC1 LINE L1 -6 6327 5988 218 269 19 0 chr2 10682638 10682690 -242573893 + L2 LINE L2 2577 2629 -685 263 132 0 19 chr2 10682703 10682756 -242573827 - L1MA3 LINE L1 0 6305 6254 274 285 183 37 chr2 10682983 10683278 -242573305 + L2 LINE L2 2934 3271 -1 183 204 41 0 chr2 10684897 10684946 -242571637 - L2 LINE L2 -37 3235 3185 606 105 0 0 chr2 10684955 10685041 -242571542 + AluJ/FRAM SINE Alu 227 312 0 395 265 10 10 chr2 10685041 10685139 -242571444 - L2 LINE L2 -4 3309 3212 629 299 56 0 chr2 10685142 10685376 -242571207 + L1ME3A LINE L1 5595 5841 -329 546 91 0 0 chr2 10687693 10687770 -242568813 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 2067 107 10 3 chr2 10687771 10688061 -242568522 - AluSx SINE Alu -19 293 2 2171 88 3 7 chr2 10688764 10689060 -242567523 + AluSx SINE Alu 1 295 -17 223 105 0 0 chr2 10689350 10689388 -242567195 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 763 178 0 0 chr2 10689388 10689506 -242567077 - FLAM_C SINE Alu -24 119 2 661 189 128 19 chr2 10689545 10689763 -242566820 - L1MB7 LINE L1 0 6168 5933 576 256 63 49 chr2 10690488 10690711 -242565872 - MIR SINE MIR -13 249 24 234 0 0 0 chr2 10690893 10690919 -242565664 + (TG)n Simple_repeat Simple_repeat 1 26 0 354 232 152 56 chr2 10691299 10691424 -242565159 - L2 LINE L2 0 3313 3177 1640 184 122 6 chr2 10692227 10692554 -242564029 - MLT1A1 LTR MaLR 0 365 1 195 294 0 0 chr2 10692971 10693022 -242563561 - MIR SINE MIR -6 256 206 291 238 159 72 chr2 10693697 10693800 -242562783 - LTR50 LTR ERVL 0 795 702 1207 207 194 20 chr2 10693800 10694196 -242562387 + MLT1C LTR MaLR 1 465 -2 291 238 159 72 chr2 10694196 10694382 -242562201 - LTR50 LTR ERVL -93 702 481 198 0 0 0 chr2 10694472 10694494 -242562089 + (GA)n Simple_repeat Simple_repeat 2 23 0 670 186 22 71 chr2 10694631 10694814 -242561769 - LTR41 LTR ERVL -599 174 1 247 348 160 8 chr2 10695004 10695129 -242561454 - MIR SINE MIR -71 137 11 548 252 39 32 chr2 10695882 10695938 -242560645 - MIR SINE MIR -7 255 201 2246 119 0 10 chr2 10695938 10696250 -242560333 - AluSq SINE Alu -4 309 1 548 252 39 32 chr2 10696250 10696348 -242560235 - MIR SINE MIR -61 201 100 185 0 0 39 chr2 10696820 10696846 -242559737 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 224 279 44 15 chr2 10696931 10696999 -242559584 - MIR SINE MIR -171 91 22 331 271 44 117 chr2 10697243 10697560 -242559023 - L2 LINE L2 -346 2968 2675 2239 120 0 0 chr2 10697725 10698026 -242558557 - AluSx SINE Alu -11 301 1 769 276 113 16 chr2 10698083 10698461 -242558122 - L1MC4a LINE L1 -296 5825 5524 317 198 22 0 chr2 10698923 10699014 -242557569 - MER96 DNA MER1_type? -82 93 1 181 276 58 11 chr2 10701106 10701193 -242555390 - MIR3 SINE MIR -103 105 15 220 231 77 77 chr2 10701377 10701455 -242555128 - MIR SINE MIR -16 246 169 298 268 99 42 chr2 10701938 10702080 -242554503 + MIR SINE MIR 47 196 -66 2396 117 120 5 chr2 10702220 10702604 -242553979 - MSTA LTR MaLR 0 428 1 441 134 0 37 chr2 10702604 10702686 -242553897 - MSTA-int LTR MaLR 0 1580 1502 2270 102 0 0 chr2 10702686 10702979 -242553604 - AluSx SINE Alu -19 293 1 533 237 10 110 chr2 10703031 10703108 -242553475 + MER34 LTR ERV1 281 364 -178 4590 97 4 39 chr2 10703108 10703511 -242553072 + MER4A LTR ERV1 1 416 -248 1971 164 0 3 chr2 10703511 10703822 -242552761 + AluJb SINE Alu 1 310 -2 4590 97 4 39 chr2 10703822 10703965 -242552618 + MER4A LTR ERV1 416 521 -143 2323 101 0 7 chr2 10703965 10704261 -242552322 + AluSx SINE Alu 1 294 -18 4590 97 4 39 chr2 10704261 10704401 -242552182 + MER4A LTR ERV1 521 664 0 533 237 10 110 chr2 10704401 10704614 -242551969 + MER34 LTR ERV1 364 542 0 1609 175 26 0 chr2 10704614 10704917 -242551666 - L1MB3 LINE L1 -74 6109 5799 336 200 100 12 chr2 10704917 10704997 -242551586 + MER21B LTR ERV1 1 87 -776 2764 256 46 8 chr2 10705021 10705779 -242550804 + MER21B LTR ERV1 19 805 -58 2509 162 11 62 chr2 10705805 10706362 -242550221 - L1MB3 LINE L1 -371 5812 5287 2353 93 7 0 chr2 10706993 10707295 -242549288 - AluSp SINE Alu -9 304 1 820 233 112 43 chr2 10707440 10707814 -242548769 + MER110A LTR ERV1 39 438 -30 448 228 81 47 chr2 10708586 10708735 -242547848 + MIR SINE MIR 20 173 -89 493 205 0 0 chr2 10710448 10710531 -242546052 - AluJ/FLAM SINE Alu -228 84 2 2436 87 0 0 chr2 10710598 10710897 -242545686 + AluSg SINE Alu 1 299 -11 618 227 28 0 chr2 10711130 10711271 -242545312 - MER58A DNA MER1_type -44 180 36 215 297 72 45 chr2 10711496 10711607 -242544976 - MIR SINE MIR -30 232 119 2476 58 27 0 chr2 10712012 10712304 -242544279 - AluY SINE Alu -11 300 1 819 168 0 0 chr2 10712352 10712477 -242544106 + FLAM_A SINE Alu 18 142 0 203 252 107 48 chr2 10712846 10712949 -242543634 - MIR SINE MIR -59 203 95 2242 119 3 3 chr2 10713854 10714166 -242542417 + AluSx SINE Alu 1 312 0 2015 116 38 20 chr2 10714248 10714541 -242542042 + AluSx SINE Alu 1 298 -14 184 308 221 29 chr2 10714670 10714774 -242541809 + MER5A DNA MER1_type 65 188 -1 * 193 222 44 0 chr2 10714774 10714816 -242541767 - MIR3 SINE MIR -52 156 113 203 268 18 0 chr2 10714960 10715016 -242541567 + GA-rich Low_complexity Low_complexity 4 60 0 274 215 118 0 chr2 10715122 10715224 -242541359 - L1ME LINE L1 -306 5856 5743 373 253 120 19 chr2 10715279 10715437 -242541146 - MIR SINE MIR -27 235 62 204 97 0 0 chr2 10715855 10715886 -242540697 + (A)n Simple_repeat Simple_repeat 1 31 0 1132 224 88 58 chr2 10715924 10716170 -242540413 + Charlie4a DNA MER1_type 37 274 -1687 1391 171 0 0 chr2 10716170 10716404 -242540179 + MER46A DNA MER2_type 3 236 0 1132 224 88 58 chr2 10716404 10716532 -242540051 + Charlie4a DNA MER1_type 274 430 -1531 1612 185 9 64 chr2 10716532 10716862 -242539721 - AluJb SINE Alu 0 312 1 1132 224 88 58 chr2 10716862 10716938 -242539645 + Charlie4a DNA MER1_type 430 502 -6 1810 167 11 0 chr2 10716954 10717236 -242539347 + AluJb SINE Alu 7 291 -21 314 304 80 9 chr2 10718839 10718951 -242537632 - MIR SINE MIR -38 224 105 187 150 25 25 chr2 10719061 10719101 -242537482 + L2 LINE L2 3176 3215 -98 2478 80 3 0 chr2 10719108 10719408 -242537175 - AluSp SINE Alu -12 301 1 383 200 12 0 chr2 10719721 10719801 -242536782 + Tigger3(Golem) DNA MER2_type 28 108 -2921 * 506 131 39 108 chr2 10719793 10719855 -242536728 + Tigger3(Golem) DNA MER2_type 2279 2329 -700 2581 62 0 0 chr2 10719855 10720159 -242536424 - AluY SINE Alu -7 304 1 506 131 39 108 chr2 10720159 10720226 -242536357 + Tigger3(Golem) DNA MER2_type 2329 2399 -630 6021 25 5 0 chr2 10720227 10720974 -242535609 - L1P LINE L1 -1097 5049 4299 7451 15 42 0 chr2 10720974 10721989 -242534594 + L1PA2 LINE L1 5104 6155 0 454 132 49 56 chr2 10721991 10722037 -242534546 + Tigger3(Golem) DNA MER2_type 2381 2426 -603 1951 130 23 23 chr2 10722037 10722344 -242534239 + AluJo SINE Alu 1 307 -5 454 132 49 56 chr2 10722344 10722441 -242534142 + Tigger3(Golem) DNA MER2_type 2426 2523 -506 640 199 7 41 chr2 10722447 10722593 -242533990 + FLAM_C SINE Alu 3 143 0 229 135 19 0 chr2 10722594 10722646 -242533937 + Tigger3(Golem) DNA MER2_type 2515 2567 -462 1616 142 45 7 chr2 10722651 10722939 -242533644 + Tigger3(Golem) DNA MER2_type 2682 2980 -49 1638 148 79 11 chr2 10723163 10723441 -242533142 - AluJo SINE Alu -15 297 1 226 286 0 0 chr2 10723481 10723551 -242533032 - L1M4 LINE L1 -2225 3921 3852 216 293 157 36 chr2 10723750 10723890 -242532693 - MIR SINE MIR -42 220 64 276 281 47 47 chr2 10724033 10724161 -242532422 - L2 LINE L2 -523 2791 2664 224 274 271 31 chr2 10724221 10724579 -242532004 - L2 LINE L2 -1343 1971 1528 961 162 203 22 chr2 10724668 10724777 -242531806 + MER33 DNA MER1_type 5 93 -2492 2071 102 60 0 chr2 10724777 10725060 -242531523 - AluSx SINE Alu -12 300 1 961 162 203 22 chr2 10725060 10725221 -242531362 + MER33 DNA MER1_type 93 324 0 1200 137 188 74 chr2 10725346 10725617 -242530966 + AluJb SINE Alu 1 302 0 545 297 120 0 chr2 10726067 10726242 -242530341 - MIR SINE MIR -28 234 39 1372 187 126 0 chr2 10727200 10727462 -242529121 + AluJo SINE Alu 2 296 -6 520 160 36 75 chr2 10727462 10727630 -242528953 - MIR SINE MIR -60 202 47 2247 76 21 7 chr2 10727870 10728161 -242528422 - AluSp SINE Alu -18 295 1 23 33 0 0 chr2 10728527 10728557 -242528026 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10728762 10728788 -242527795 + GC_rich Low_complexity Low_complexity 1 26 0 291 198 83 62 chr2 10729296 10729392 -242527191 + MIR SINE MIR 89 186 -76 2162 124 3 7 chr2 10729392 10729698 -242526885 + AluSq SINE Alu 1 305 -8 230 261 80 0 chr2 10729710 10729798 -242526785 + L1MEc LINE L1 1408 1502 -4894 209 227 0 27 chr2 10729815 10729890 -242526693 + CT-rich Low_complexity Low_complexity 3 75 0 2073 105 0 44 chr2 10729962 10730278 -242526305 - AluSx SINE Alu 0 303 1 923 130 0 15 chr2 10730298 10730429 -242526154 - AluJb SINE Alu -183 129 1 1053 309 55 28 chr2 10730434 10731258 -242525325 - L1M4 LINE L1 -964 5182 4337 817 142 0 17 chr2 10731288 10731408 -242525175 - FLAM_C SINE Alu -25 118 1 634 208 0 0 chr2 10731456 10731562 -242525021 + AluJb SINE Alu 190 295 -17 714 239 95 104 chr2 10731587 10732010 -242524573 + L1ME3A LINE L1 5533 5951 -219 2485 204 29 18 chr2 10732354 10732898 -242523685 + MER44D DNA MER2_type 1 605 0 320 307 112 13 chr2 10733442 10733619 -242522964 - MIR SINE MIR -56 152 3 539 246 119 42 chr2 10733742 10733978 -242522605 + MLT1L LTR MaLR 42 295 -320 238 244 87 61 chr2 10734520 10734635 -242521948 + MLT1L LTR MaLR 178 295 -320 860 260 132 3 chr2 10736736 10737063 -242519520 - MLT1B LTR MaLR -1 389 21 252 254 0 0 chr2 10737525 10737580 -242519003 + (TG)n Simple_repeat Simple_repeat 1 55 0 23 0 0 0 chr2 10739337 10739360 -242517223 + AT_rich Low_complexity Low_complexity 1 23 0 452 320 88 24 chr2 10739433 10739764 -242516819 + LTR16A LTR ERVL 99 450 0 276 278 0 0 chr2 10740170 10740224 -242516359 - MER91A DNA MER1_type -3 187 134 687 291 23 0 chr2 10740276 10740451 -242516132 - MER91A DNA MER1_type -17 179 1 413 297 22 7 chr2 10740623 10740774 -242515809 - MIR SINE MIR -57 151 37 347 345 62 7 chr2 10740823 10740968 -242515615 - MIR3 SINE MIR -15 193 41 252 211 74 42 chr2 10742461 10742556 -242514027 - MIR SINE MIR -95 113 16 1184 201 132 3 chr2 10742909 10743212 -242513371 + L1MC1 LINE L1 5992 6333 0 326 287 80 0 chr2 10743231 10743381 -242513202 - MER112 DNA MER1_type -11 249 88 193 184 0 0 chr2 10743427 10743465 -242513118 - MIR SINE MIR -125 137 100 193 177 51 165 chr2 10743799 10743858 -242512725 - L2 LINE L2 0 3313 3264 186 43 0 0 chr2 10743858 10743881 -242512702 + (CA)n Simple_repeat Simple_repeat 1 23 0 193 177 51 165 chr2 10743881 10743900 -242512683 - L2 LINE L2 -49 3264 3244 1680 242 82 11 chr2 10744265 10744789 -242511794 - MER74B LTR ERVL -59 563 3 2022 190 73 7 chr2 10745582 10746019 -242510564 + MLT1C LTR MaLR 2 467 0 2073 113 3 7 chr2 10746042 10746335 -242510248 - AluSg SINE Alu -14 296 5 267 159 0 0 chr2 10746335 10746379 -242510204 - Alu SINE Alu -258 44 1 197 304 0 36 chr2 10746387 10746443 -242510140 + MIR SINE MIR 105 152 -56 215 383 12 0 chr2 10746803 10746884 -242509699 - L2 LINE L2 -31 3241 3160 448 274 20 26 chr2 10747009 10747162 -242509421 + MER3 DNA MER1_type 1 152 -57 1256 199 78 57 chr2 10747163 10747452 -242509131 - L1MB8 LINE L1 -9 6169 5887 198 0 0 0 chr2 10747452 10747474 -242509109 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2040 110 32 0 chr2 10747475 10747756 -242508827 - AluSx SINE Alu -22 290 1 1256 199 78 57 chr2 10747756 10747851 -242508732 - L1MB8 LINE L1 -290 5888 5775 1864 164 3 26 chr2 10749397 10749709 -242506874 + AluJb SINE Alu 5 309 -3 321 100 0 0 chr2 10749709 10749759 -242506824 + (CA)n Simple_repeat Simple_repeat 2 51 0 1093 240 75 9 chr2 10749790 10750123 -242506460 - MER90 LTR ERV1 -1 613 259 490 319 43 11 chr2 10751324 10751512 -242505071 + MIR SINE MIR 16 209 -53 194 345 35 26 chr2 10751552 10751665 -242504918 + L3 LINE CR1 1109 1222 -355 1146 244 47 22 chr2 10752617 10752804 -242503779 - MLT1B LTR MaLR -17 373 192 2212 85 52 36 chr2 10752804 10753110 -242503473 - AluSx SINE Alu -1 311 1 1146 244 47 22 chr2 10753110 10753286 -242503297 - MLT1B LTR MaLR -198 192 1 571 281 45 11 chr2 10753311 10753532 -242503051 + MIR SINE MIR 17 244 -18 293 368 105 13 chr2 10753868 10754020 -242502563 - L2 LINE L2 -14 3258 3093 210 231 0 0 chr2 10754090 10754142 -242502441 - MIR SINE MIR -91 117 66 192 338 22 37 chr2 10755060 10755196 -242501387 + MIR3 SINE MIR 30 163 -45 411 325 110 0 chr2 10755239 10755393 -242501190 + MIR SINE MIR 35 205 -57 1525 237 47 24 chr2 10755443 10755895 -242500688 + MLT1C LTR MaLR 6 467 0 713 271 22 118 chr2 10756375 10757095 -242499488 - L1M4 LINE L1 -4012 3126 2476 189 0 0 0 chr2 10757368 10757389 -242499194 + (A)n Simple_repeat Simple_repeat 1 21 0 2086 116 0 0 chr2 10757396 10757663 -242498920 - AluSg SINE Alu -43 267 1 2534 196 84 55 chr2 10757671 10758916 -242497667 - L1M4 LINE L1 -4532 2425 961 301 275 9 37 chr2 10758935 10759044 -242497539 - L2 LINE L2 0 3272 3167 216 0 0 0 chr2 10759430 10759454 -242497129 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 204 267 10 89 chr2 10759514 10759615 -242496968 - L3 LINE CR1 -896 681 589 2176 133 3 3 chr2 10760369 10760677 -242495906 - AluSx SINE Alu -4 308 1 823 230 0 0 chr2 10760681 10760859 -242495724 - L1M4 LINE L1 -5886 973 796 1529 226 36 67 chr2 10760874 10761321 -242495262 - L1M4 LINE L1 -6422 437 5 2327 106 0 0 chr2 10761462 10761754 -242494829 - AluSp SINE Alu -21 292 1 2225 121 3 0 chr2 10761754 10762051 -242494532 - AluSx SINE Alu -14 298 1 259 217 0 0 chr2 10762132 10762189 -242494394 + MIR SINE MIR 95 143 -65 408 328 54 47 chr2 10762193 10762510 -242494073 + MLT1J LTR MaLR 43 361 -150 1833 195 0 3 chr2 10762529 10762842 -242493741 - AluJo SINE Alu 0 312 1 573 252 8 0 chr2 10762843 10762974 -242493609 + L1ME3 LINE L1 6031 6162 0 199 321 0 0 chr2 10763177 10763233 -242493350 + L2 LINE L2 3214 3269 -3 225 315 0 0 chr2 10763972 10764026 -242492557 - MIR SINE MIR -68 140 87 180 247 149 39 chr2 10764241 10764395 -242492188 - L2 LINE L2 -275 2997 2827 584 212 92 26 chr2 10764848 10765218 -242491365 - MLT1C LTR MaLR -6 461 54 3255 150 51 23 chr2 10765218 10765849 -242490734 + MER51A LTR ERV1 1 640 0 257 179 54 36 chr2 10765849 10765904 -242490679 - MLT1C LTR MaLR -410 57 2 320 324 105 0 chr2 10766616 10766721 -242489862 + MIR SINE MIR 49 164 -98 1637 255 38 24 chr2 10767072 10767596 -242488987 - L1ME1 LINE L1 -2 6176 5664 1453 80 35 0 chr2 10767596 10767795 -242488788 - L1PA10 LINE L1 -5 6163 5958 1637 255 38 24 chr2 10767795 10767847 -242488736 - L1ME1 LINE L1 -514 5664 5614 1228 61 0 0 chr2 10767855 10768003 -242488580 - AluSp/q SINE Alu -8 305 158 182 200 0 29 chr2 10768677 10768712 -242487871 - MIR SINE MIR -7 255 222 221 324 0 15 chr2 10768769 10768837 -242487746 - MIR SINE MIR -166 96 30 848 218 0 6 chr2 10770882 10771061 -242485522 - MLT1B LTR MaLR -1 389 212 1520 173 114 13 chr2 10771078 10771472 -242485111 - LTR48 LTR ERV1 -30 757 324 2311 121 3 0 chr2 10771961 10772266 -242484317 - AluSx SINE Alu -3 309 4 588 246 15 0 chr2 10772278 10772412 -242484171 - MLT1B LTR MaLR -238 136 1 180 239 43 0 chr2 10772477 10772523 -242484060 - MIR SINE MIR -60 148 101 633 234 102 51 chr2 10772720 10772976 -242483607 - MER46C DNA MER2_type -26 312 44 2323 111 0 9 chr2 10773876 10774192 -242482391 - AluSq SINE Alu 0 313 1 230 154 0 0 chr2 10774432 10774471 -242482112 - HAL1 LINE L1 -1837 670 632 570 187 129 19 chr2 10774498 10774653 -242481930 - MLT1C LTR MaLR -295 172 1 2571 90 8 8 chr2 10774735 10775090 -242481493 - THE1A LTR MaLR 0 355 1 2928 213 236 35 chr2 10776524 10777504 -242479079 - MLT1K-int LTR MaLR -382 1353 177 3340 164 16 41 chr2 10777694 10778328 -242478255 + LTR35 LTR ERV1 1 618 0 29 0 0 0 chr2 10779537 10779566 -242477017 + AT_rich Low_complexity Low_complexity 1 29 0 2345 83 7 0 chr2 10779694 10779994 -242476589 - AluSg SINE Alu -7 303 2 488 285 107 47 chr2 10780234 10780617 -242475966 - MLT1K LTR MaLR -40 548 143 2313 102 57 25 chr2 10780644 10780997 -242475586 + THE1B LTR MaLR 1 364 0 462 264 51 13 chr2 10781406 10781565 -242475018 - MIR SINE MIR -56 152 38 385 309 40 0 chr2 10781686 10781812 -242474771 + L3 LINE CR1 1419 1549 -28 2081 218 78 18 chr2 10782333 10782958 -242473625 - L1M4 LINE L1 -751 5395 4733 1141 223 14 44 chr2 10782961 10783325 -242473258 - L1M4 LINE L1 -2391 3755 3403 328 333 51 17 chr2 10783386 10783503 -242473080 + L2 LINE L2 3146 3266 -6 414 294 138 33 chr2 10783628 10784019 -242472564 + L1MC/D LINE L1 5349 5780 -2028 2061 199 185 16 chr2 10784156 10784714 -242471869 + MLT1E1 LTR MaLR 1 652 -2 240 267 19 57 chr2 10785319 10785424 -242471159 - MIR SINE MIR -54 208 108 234 243 27 0 chr2 10785611 10785685 -242470898 + G-rich Low_complexity Low_complexity 5 80 0 5423 34 2 0 chr2 10785759 10786351 -242470232 - SVA Other Other 0 1386 794 245 0 0 166 chr2 10786575 10786925 -242469658 + (GTGTG)n Simple_repeat Simple_repeat 1 291 0 337 289 98 64 chr2 10786978 10787182 -242469401 - MIR SINE MIR -31 231 21 453 253 37 19 chr2 10787489 10787651 -242468932 + LTR16C LTR ERVL 76 240 -251 205 211 100 78 chr2 10788206 10788296 -242468287 + MIR SINE MIR 41 132 -76 224 315 161 15 chr2 10788599 10788729 -242467854 + L2 LINE L2 3122 3270 -2 956 118 0 0 chr2 10789791 10789935 -242466648 - L1MA2 LINE L1 0 6304 6161 1536 178 113 9 chr2 10790604 10790941 -242465642 + MLT1A2 LTR MaLR 1 372 -2 319 302 166 7 chr2 10791019 10791158 -242465425 + MIR SINE MIR 28 188 -74 1860 146 13 49 chr2 10791374 10791682 -242464901 - AluSx SINE Alu -15 297 1 30 45 0 0 chr2 10791866 10791910 -242464673 + AT_rich Low_complexity Low_complexity 1 44 0 542 355 55 4 chr2 10791914 10792170 -242464413 + L1ME LINE L1 4981 5249 -897 801 287 65 37 chr2 10792186 10792382 -242464201 + L1ME LINE L1 5265 5454 -667 2270 87 14 3 chr2 10792382 10792670 -242463913 + AluSc SINE Alu 1 291 -18 801 287 65 37 chr2 10792670 10792919 -242463664 + L1ME LINE L1 5454 5736 -385 25 0 0 0 chr2 10793076 10793101 -242463482 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 10793226 10793255 -242463328 + AT_rich Low_complexity Low_complexity 1 29 0 214 278 0 0 chr2 10794670 10794724 -242461859 - MIR SINE MIR -68 140 87 481 225 155 0 chr2 10795243 10795385 -242461198 + MER45A DNA AcHobo 3 166 -12 2857 178 12 21 chr2 10795428 10796008 -242460575 - L1MB7 LINE L1 -17 6167 5593 309 217 72 12 chr2 10796010 10796093 -242460490 - MER50 LTR ERV1 -130 604 517 1681 172 25 0 chr2 10796132 10796451 -242460132 - L1MB7 LINE L1 -572 5608 5282 914 206 52 4 chr2 10797320 10797568 -242459015 + LTR16C LTR ERVL 232 491 0 610 285 36 5 chr2 10798421 10798614 -242457969 - MIR SINE MIR -32 230 32 394 292 0 18 chr2 10800640 10800753 -242455830 - MIR SINE MIR -118 144 34 615 222 84 67 chr2 10801762 10801881 -242454702 - LTR37A LTR ERV1 -25 401 285 411 38 0 0 chr2 10801881 10801934 -242454649 + (TG)n Simple_repeat Simple_repeat 1 53 0 615 222 84 67 chr2 10801934 10802170 -242454413 - LTR37A LTR ERV1 -141 285 40 225 65 0 0 chr2 10802189 10802220 -242454363 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2101 117 74 14 chr2 10802263 10802615 -242453968 - THE1C LTR MaLR -2 373 1 648 256 134 20 chr2 10803038 10803292 -242453291 - L2 LINE L2 0 3313 3031 707 277 60 16 chr2 10803356 10803605 -242452978 + Zaphod DNA AcHobo 3740 3999 -32 646 246 33 15 chr2 10805079 10805307 -242451276 + MER106B DNA MER1_type 1 1059 0 797 239 164 109 chr2 10805394 10806260 -242450323 - L2 LINE L2 0 3313 2417 793 294 58 55 chr2 10806923 10807321 -242449262 + HAL1 LINE L1 775 1173 -1334 3011 94 34 0 chr2 10807334 10807748 -242448835 - MSTA LTR MaLR 0 428 1 802 138 51 29 chr2 10807909 10808047 -242448536 - FLAM_C SINE Alu -2 141 1 351 368 96 18 chr2 10808151 10808371 -242448212 + HAL1b LINE L1 410 646 -702 1867 137 13 23 chr2 10808493 10808792 -242447791 + AluSx SINE Alu 1 296 -16 307 294 0 10 chr2 10809182 10809284 -242447299 + MIR SINE MIR 152 252 -10 231 247 39 52 chr2 10809447 10809524 -242447059 + L1ME4a LINE L1 5781 5856 -265 318 26 0 0 chr2 10809611 10809650 -242446933 + (CA)n Simple_repeat Simple_repeat 2 40 0 333 261 51 58 chr2 10809654 10809792 -242446791 + L1ME4a LINE L1 5984 6120 -1 300 400 20 0 chr2 10811449 10811599 -242444984 - MIR3 SINE MIR -8 200 48 255 328 172 0 chr2 10811891 10812007 -242444576 - L2 LINE L2 -4 3268 3133 279 357 60 43 chr2 10813500 10813685 -242442898 - L2 LINE L2 -5 3267 3080 856 191 36 0 chr2 10813910 10814078 -242442505 + MER5B DNA MER1_type 4 177 -1 378 250 19 37 chr2 10814606 10814714 -242441869 - MIR SINE MIR -113 149 44 180 321 184 9 chr2 10814836 10814945 -242441638 - L2 LINE L2 -24 3248 3121 2345 96 10 10 chr2 10815252 10815565 -242441018 - AluSq SINE Alu 0 313 1 238 276 26 13 chr2 10816195 10816271 -242440312 + MIR3 SINE MIR 124 200 -8 291 210 16 0 chr2 10817627 10817689 -242438894 - MER103 DNA DNA -87 79 17 671 236 14 48 chr2 10818021 10818229 -242438354 + MER112 DNA MER1_type 28 228 -32 259 264 148 22 chr2 10818255 10818437 -242438146 - Charlie8 DNA MER1_type -2135 282 78 2067 106 3 61 chr2 10818452 10818781 -242437802 + AluSg SINE Alu 1 310 0 421 288 119 30 chr2 10819511 10819851 -242436732 - MLT1J LTR MaLR -5 610 136 249 163 0 0 chr2 10819909 10819958 -242436625 + A-rich Low_complexity Low_complexity 1 49 0 311 368 121 4 chr2 10820112 10820351 -242436232 - L2 LINE L2 -796 2518 2252 1742 223 71 2 chr2 10820655 10821077 -242435506 - MLT1C LTR MaLR 0 467 17 2036 120 60 43 chr2 10822423 10822791 -242433792 + THE1C LTR MaLR 2 375 0 1942 201 49 27 chr2 10823787 10824235 -242432348 - L1MDa LINE L1 -6058 482 25 330 194 0 0 chr2 10824530 10824602 -242431981 + GA-rich Low_complexity Low_complexity 2 73 0 2305 94 0 13 chr2 10826950 10827258 -242429325 - AluY SINE Alu -7 304 1 627 255 13 106 chr2 10827335 10827637 -242428946 + L2 LINE L2 2966 3239 -74 186 43 0 0 chr2 10828142 10828165 -242428418 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 41867 30 21 1 chr2 10828923 10834954 -242421629 - L1HS LINE L1 0 6155 1 259 295 196 48 chr2 10835374 10835875 -242420708 - L2 LINE L2 -354 2960 2386 1879 187 48 41 chr2 10836064 10836525 -242420058 + MLT1C LTR MaLR 4 467 0 195 387 65 0 chr2 10837752 10837876 -242418707 - MIR SINE MIR -6 256 125 948 258 127 39 chr2 10838775 10839212 -242417371 + MLT1D LTR MaLR 1 481 -24 213 94 0 0 chr2 10839212 10839244 -242417339 + (TTAGGG)n Simple_repeat Simple_repeat 4 35 0 948 258 127 39 chr2 10839244 10839263 -242417320 + MLT1D LTR MaLR 481 497 -8 533 305 13 7 chr2 10839365 10839516 -242417067 - MIR SINE MIR -98 164 13 301 293 109 46 chr2 10839552 10839726 -242416857 + L1ME4a LINE L1 5707 5891 -230 256 340 28 0 chr2 10839945 10840051 -242416532 + MIR SINE MIR 99 207 -55 1314 33 0 0 chr2 10840352 10840546 -242416037 + L1PA3 LINE L1 5994 6187 0 1082 57 0 0 chr2 10841389 10841529 -242415054 - L1P2 LINE L1 -432 5722 5583 1125 62 0 0 chr2 10841529 10841664 -242414919 + L1PA5 LINE L1 6010 6154 0 336 85 0 0 chr2 10842076 10842123 -242414460 + MADE1 DNA Mariner 34 80 0 38 75 0 0 chr2 10842151 10842231 -242414352 + AT_rich Low_complexity Low_complexity 1 80 0 357 220 11 22 chr2 10842309 10842400 -242414183 + L1MC5 LINE L1 7824 7913 -48 3217 87 9 9 chr2 10843644 10844093 -242412490 + L1PA13 LINE L1 5709 6157 -6 2028 190 94 14 chr2 10844133 10844570 -242412013 + MER70A LTR ERVL 1 472 0 2147 133 0 16 chr2 10844662 10844978 -242411605 + AluSx SINE Alu 1 311 -1 258 32 0 0 chr2 10845597 10845628 -242410955 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2128 142 3 0 chr2 10845638 10845941 -242410642 - AluSx SINE Alu -8 304 1 2468 123 39 14 chr2 10845947 10846363 -242410220 + MSTA LTR MaLR 1 426 -2 840 253 29 17 chr2 10846449 10846690 -242409893 + MIR SINE MIR 8 251 -11 253 296 0 0 chr2 10847073 10847154 -242409429 + MIR SINE MIR 50 130 -132 533 272 47 11 chr2 10847953 10848144 -242408439 + L1M4 LINE L1 4774 4971 -1175 1915 169 3 7 chr2 10849004 10849311 -242407272 - AluJb SINE Alu -2 310 5 242 306 37 28 chr2 10849317 10849425 -242407158 - MIR SINE MIR -123 139 31 227 336 25 25 chr2 10850220 10850342 -242406241 + MIR SINE MIR 20 141 -121 302 125 0 0 chr2 10850361 10850409 -242406174 - MSTA LTR MaLR -36 392 345 231 257 55 28 chr2 10850546 10850655 -242405928 + MIR SINE MIR 81 192 -70 1597 149 163 10 chr2 10850784 10851085 -242405498 - MSTA LTR MaLR -70 358 12 276 350 125 0 chr2 10851990 10852110 -242404473 - L2 LINE L2 -1 3271 3137 1843 125 15 0 chr2 10852889 10853153 -242403430 - MSTC LTR MaLR 0 428 161 2403 221 67 34 chr2 10853156 10853838 -242402745 + MER72 LTR ERV1 5 709 -13 322 138 0 31 chr2 10853838 10853903 -242402680 + MER49 LTR ERV1 861 923 0 894 150 61 0 chr2 10853904 10854051 -242402532 - MSTC LTR MaLR -272 156 1 184 196 157 0 chr2 10854429 10854480 -242402103 - L2 LINE L2 0 3272 3214 2444 164 39 2 chr2 10854560 10854969 -242401614 - MSTB LTR MaLR -2 424 1 2722 150 21 6 chr2 10855390 10855844 -242400739 - LTR45B LTR ERV1 -19 512 7 180 0 0 0 chr2 10857063 10857083 -242399500 + (A)n Simple_repeat Simple_repeat 1 20 0 183 162 0 0 chr2 10857521 10857558 -242399025 + GA-rich Low_complexity Low_complexity 2 38 0 420 283 41 0 chr2 10858841 10858986 -242397597 - LTR67 LTR ERVL -7 550 400 386 253 11 0 chr2 10859459 10859554 -242397029 - MER5A DNA MER1_type -93 96 1 379 276 106 64 chr2 10859782 10860065 -242396518 - HAL1 LINE L1 -648 1859 1565 1458 193 45 65 chr2 10860070 10860368 -242396215 - MLT1D LTR MaLR -93 412 122 2360 80 30 0 chr2 10860368 10860670 -242395913 - AluY SINE Alu 0 311 1 1458 193 45 65 chr2 10860670 10860771 -242395812 - MLT1D LTR MaLR -382 123 21 2193 113 0 0 chr2 10860822 10861141 -242395442 - AluSx SINE Alu 0 319 1 192 77 0 0 chr2 10862044 10862070 -242394513 + (CAA)n Simple_repeat Simple_repeat 2 27 0 438 233 20 64 chr2 10862154 10862356 -242394227 - HAL1 LINE L1 -957 1550 1358 2178 134 0 0 chr2 10862460 10862765 -242393818 + AluSx SINE Alu 1 305 -7 1128 300 102 44 chr2 10862905 10864239 -242392344 - L1ME3A LINE L1 -204 5966 4485 1492 201 4 14 chr2 10864239 10864543 -242392040 - AluJo SINE Alu 0 307 7 1128 300 102 44 chr2 10864543 10865229 -242391354 - L1ME3A LINE L1 -1685 4485 3840 3074 234 47 21 chr2 10865664 10866412 -242390171 + L1M4 LINE L1 8 774 -5768 2929 185 80 7 chr2 10866409 10867021 -242389562 + L1MB7 LINE L1 5383 6039 -145 * 3753 106 34 5 chr2 10867055 10867611 -242388972 - L1PB3 LINE L1 0 6154 5583 1229 204 4 13 chr2 10867613 10867838 -242388745 + AluJb SINE Alu 1 223 -89 765 87 8 16 chr2 10867923 10868049 -242388534 + (GAAA)n Simple_repeat Simple_repeat 2 126 0 14722 206 9 12 chr2 10868049 10871870 -242384713 - L1PB3 LINE L1 -562 5592 1711 580 204 53 0 chr2 10871877 10872009 -242384574 + L1MB8 LINE L1 6028 6166 -12 257 333 12 0 chr2 10872887 10872968 -242383615 - HAL1 LINE L1 -2422 85 4 235 204 0 0 chr2 10874711 10874760 -242381823 + L1MD3 LINE L1 6726 6774 -1221 1175 170 185 122 chr2 10874764 10875001 -242381582 + L1MC3 LINE L1 6846 7067 -718 268 234 31 0 chr2 10875001 10875065 -242381518 + MLT1F1 LTR MaLR 44 109 -458 1175 170 185 122 chr2 10875065 10875363 -242381220 + L1MC3 LINE L1 7067 7482 -303 747 135 18 0 chr2 10875353 10875464 -242381119 + L1M3 LINE L1 5567 5679 -501 * 233 320 122 18 chr2 10876000 10876222 -242380361 - MIR SINE MIR -6 256 12 2317 143 64 7 chr2 10877122 10877527 -242379056 + MSTA LTR MaLR 1 428 0 3529 156 0 0 chr2 10877798 10878325 -242378258 - MER1A DNA MER1_type 0 527 1 253 263 202 0 chr2 10878469 10878568 -242378015 - MIR SINE MIR -92 170 52 2083 215 25 19 chr2 10878586 10879077 -242377506 + L1MD2 LINE L1 5859 6357 -2 1919 138 7 3 chr2 10879197 10879486 -242377097 - AluJb SINE Alu -22 290 1 985 135 0 0 chr2 10879972 10880105 -242376478 + AluSx SINE Alu 1 133 -180 301 211 0 84 chr2 10880123 10880218 -242376365 - L1MC4 LINE L1 -1339 6703 6617 328 216 0 14 chr2 10880219 10880293 -242376290 - L1MC4 LINE L1 -1334 6708 6636 1143 127 0 0 chr2 10880298 10880456 -242376127 + AluSx SINE Alu 134 291 -19 210 250 0 0 chr2 10880485 10880541 -242376042 + (TATG)n Simple_repeat Simple_repeat 2 57 0 269 358 113 26 chr2 10880604 10880833 -242375750 + MIR SINE MIR 12 260 -2 331 285 84 45 chr2 10880922 10881101 -242375482 + MIR SINE MIR 6 191 -71 502 240 6 22 chr2 10881520 10881703 -242374880 + (TG)n Simple_repeat Simple_repeat 1 180 0 323 345 35 22 chr2 10882229 10882461 -242374122 + L1 LINE L1 3588 3822 -2324 414 39 0 0 chr2 10883801 10883853 -242372730 + (CA)n Simple_repeat Simple_repeat 1 52 0 261 163 0 0 chr2 10883881 10883930 -242372653 + (TG)n Simple_repeat Simple_repeat 2 50 0 1804 118 8 0 chr2 10884032 10884277 -242372306 + AluSx SINE Alu 1 247 -65 237 280 100 25 chr2 10884507 10884707 -242371876 - L2 LINE L2 -244 3028 2814 216 285 16 32 chr2 10885292 10885415 -242371168 - MIR3 SINE MIR -6 202 82 2309 119 0 0 chr2 10885457 10885760 -242370823 + AluSx SINE Alu 1 303 -9 2385 99 0 0 chr2 10886035 10886338 -242370245 + AluSg SINE Alu 1 303 -7 267 312 63 13 chr2 10886355 10886577 -242370006 - MLT1L LTR MaLR -138 477 168 652 255 82 32 chr2 10887818 10888389 -242368194 + MER115 DNA AcHobo 35 693 0 2329 109 0 0 chr2 10888993 10889295 -242367288 + AluSx SINE Alu 1 302 -10 240 357 39 10 chr2 10889375 10889576 -242367007 - MIR SINE MIR -25 237 30 348 292 9 0 chr2 10890807 10890920 -242365663 + L1MC4a LINE L1 2705 2818 -3328 278 285 82 40 chr2 10890968 10891285 -242365298 - LTR16A LTR ERVL 0 450 43 2210 268 89 23 chr2 10891364 10892861 -242363722 + L1MC4a LINE L1 4456 5399 -747 761 210 37 1 chr2 10893314 10893506 -242363077 + L1MC5 LINE L1 6637 6804 -1157 * 2673 152 21 6 chr2 10893501 10894027 -242362556 + L1M4c LINE L1 806 1339 -5045 1086 155 38 25 chr2 10894025 10894264 -242362319 + L1M4c LINE L1 2029 2270 -4114 * 5210 246 40 32 chr2 10894232 10895071 -242361512 - L1M4 LINE L1 -1265 4881 4050 6269 82 18 0 chr2 10895071 10896515 -242360068 + L1PA10 LINE L1 4731 6163 -5 5210 246 40 32 chr2 10896515 10897278 -242359305 - L1M4 LINE L1 -2096 4050 3260 1143 127 41 0 chr2 10897278 10897498 -242359085 - L1MA8 LINE L1 -5 6286 6058 5210 246 40 32 chr2 10897498 10897811 -242358772 - L1M4 LINE L1 -2886 3260 2951 308 282 53 23 chr2 10897989 10898120 -242358463 - L1M4 LINE L1 -3539 2607 2473 763 208 45 0 chr2 10898189 10898343 -242358240 - MLT1E1 LTR MaLR -23 631 471 297 68 45 0 chr2 10898336 10898380 -242358203 - MLT1E1 LTR MaLR -607 47 2 * 366 160 70 60 chr2 10898383 10898483 -242358100 - LTR16C LTR ERVL -28 463 363 308 319 113 6 chr2 10898694 10898854 -242357729 + MIR3 SINE MIR 29 205 -3 3748 30 0 8 chr2 10899475 10899945 -242356638 - L1PA4 LINE L1 0 6155 5690 422 330 89 15 chr2 10899945 10900351 -242356232 + LTR16B LTR ERVL 13 448 -16 254 384 32 0 chr2 10900368 10900493 -242356090 + HERV16 LTR ERVL 3 131 -4865 1938 304 90 59 chr2 10900674 10901112 -242355471 + HERV16 LTR ERVL 495 918 -4078 1292 196 166 16 chr2 10901112 10901545 -242355038 - LTR54B LTR ERV1 0 498 1 1938 304 90 59 chr2 10901545 10902710 -242353873 + HERV16 LTR ERVL 918 2149 -2847 198 0 0 0 chr2 10903709 10903731 -242352852 + (T)n Simple_repeat Simple_repeat 1 22 0 385 41 0 0 chr2 10903731 10903780 -242352803 - LTR17 LTR ERV1 -456 324 276 22 36 0 55 chr2 10904187 10904242 -242352341 + GC_rich Low_complexity Low_complexity 1 52 0 229 200 18 0 chr2 10904391 10904446 -242352137 + (CGG)n Simple_repeat Simple_repeat 1 56 0 296 162 321 23 chr2 10906591 10906720 -242349863 - MIR SINE MIR -62 146 18 377 281 175 6 chr2 10907047 10907207 -242349376 + MIR SINE MIR 73 259 -3 210 299 155 0 chr2 10907511 10907608 -242348975 + MIR3 SINE MIR 89 200 -8 542 190 0 66 chr2 10908517 10908638 -242347945 + MER5B DNA MER1_type 6 118 -60 463 116 0 0 chr2 10908641 10908710 -242347873 - AluJ/FRAM SINE Alu -14 298 230 506 243 169 0 chr2 10908711 10908859 -242347724 - MER5A DNA MER1_type -7 182 10 795 209 28 11 chr2 10908876 10909053 -242347530 + MER58 DNA MER1_type 3 182 -159 317 355 8 16 chr2 10909075 10909199 -242347384 - L2 LINE L2 -232 3040 2918 189 0 0 0 chr2 10909761 10909782 -242346801 + (TG)n Simple_repeat Simple_repeat 2 22 0 411 316 35 6 chr2 10909815 10909986 -242346597 - MIR SINE MIR -39 223 48 264 149 0 0 chr2 10912732 10912779 -242343804 + (TG)n Simple_repeat Simple_repeat 1 47 0 271 315 46 9 chr2 10913263 10913371 -242343212 + L2 LINE L2 3197 3308 -5 297 280 21 11 chr2 10915625 10915718 -242340865 - L2 LINE L2 -17 3296 3203 260 258 0 0 chr2 10916853 10916919 -242339664 + L2 LINE L2 3026 3091 -181 982 172 18 57 chr2 10918014 10918241 -242338342 - MER20 DNA MER1_type 0 219 2 233 299 25 11 chr2 10918453 10918552 -242338031 - MIR SINE MIR -63 145 50 1582 193 70 10 chr2 10918562 10918945 -242337638 + L1MB8 LINE L1 5771 6176 -2 192 125 0 0 chr2 10918945 10918977 -242337606 + (CA)n Simple_repeat Simple_repeat 1 32 0 558 232 26 57 chr2 10919121 10919315 -242337268 - MER5A DNA MER1_type -1 188 1 917 173 19 0 chr2 10919395 10919551 -242337032 + FRAM SINE Alu 1 159 -7 475 331 7 47 chr2 10919694 10919777 -242336806 - L1M4 LINE L1 -2149 3997 3912 2280 120 0 0 chr2 10919777 10920078 -242336505 - AluSx SINE Alu -1 311 11 475 331 7 47 chr2 10920078 10920417 -242336166 - L1M4 LINE L1 -2234 3912 3592 459 310 142 46 chr2 10920444 10920940 -242335643 + L2 LINE L2 2773 3312 -1 225 207 0 0 chr2 10921312 10921370 -242335213 - HAL1 LINE L1 -341 2166 2109 370 302 172 41 chr2 10921581 10922362 -242334221 - HAL1 LINE L1 -593 1914 1032 306 251 113 5 chr2 10922625 10922747 -242333836 + MIR SINE MIR 73 208 -54 279 93 0 0 chr2 10923451 10923494 -242333089 + L2 LINE L2 3270 3312 -1 309 197 0 0 chr2 10925131 10925207 -242331376 + (TG)n Simple_repeat Simple_repeat 1 76 0 1767 221 37 16 chr2 10925599 10926034 -242330549 - L1MB5 LINE L1 0 6174 5731 180 254 68 17 chr2 10927139 10927198 -242329385 + L2 LINE L2 3210 3271 -1 368 277 154 10 chr2 10927954 10928149 -242328434 + MER2 DNA MER2_type 123 345 0 378 363 12 0 chr2 10928171 10928339 -242328244 + (TGAG)n Simple_repeat Simple_repeat 2 171 0 327 186 29 14 chr2 10928789 10928859 -242327724 + MIR SINE MIR 80 150 -112 203 314 102 0 chr2 10929082 10929200 -242327383 - L2 LINE L2 -1 3271 3142 2235 115 118 10 chr2 10929361 10929744 -242326839 - MSTA LTR MaLR -4 424 1 7893 161 47 37 chr2 10929744 10931307 -242325276 - MSTA-int LTR MaLR 0 1580 3 1854 147 155 11 chr2 10931309 10931683 -242324900 - MSTA LTR MaLR 0 428 1 3376 195 15 9 chr2 10931927 10932594 -242323989 + LTR51 LTR ERV1 1 671 0 334 299 190 11 chr2 10932624 10932798 -242323785 - MIR SINE MIR -57 205 1 2041 135 0 10 chr2 10933824 10934120 -242322463 - AluSp SINE Alu -20 293 1 387 0 0 0 chr2 10934894 10934937 -242321646 + (CA)n Simple_repeat Simple_repeat 1 43 0 224 321 83 0 chr2 10934953 10935062 -242321521 - L2 LINE L2 0 3272 3155 216 299 15 0 chr2 10935286 10935353 -242321230 + L2 LINE L2 3205 3272 0 3431 52 4 4 chr2 10937194 10937651 -242318932 - L1PA7 LINE L1 0 6154 5698 362 244 41 57 chr2 10937810 10937876 -242318707 - MIR SINE MIR -36 226 161 2049 187 65 9 chr2 10937876 10938336 -242318247 - MER66B LTR ERV1 0 486 1 362 244 41 57 chr2 10938336 10938392 -242318191 - MIR SINE MIR -101 161 106 273 252 111 37 chr2 10939317 10939452 -242317131 - HAL1b LINE L1 -10 1338 1194 224 323 79 16 chr2 10941332 10941459 -242315124 - MIR3 SINE MIR -61 147 13 719 183 7 0 chr2 10941902 10942198 -242314385 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 1650 127 77 82 chr2 10942249 10942584 -242313999 + THE1C LTR MaLR 1 335 -40 2219 88 21 0 chr2 10942584 10942766 -242313817 - AluY SINE Alu 0 311 119 297 0 0 0 chr2 10942766 10942799 -242313784 + (TG)n Simple_repeat Simple_repeat 2 34 0 2219 88 21 0 chr2 10942799 10942901 -242313682 - AluY SINE Alu -192 119 21 1650 127 77 82 chr2 10942901 10942942 -242313641 + THE1C LTR MaLR 335 375 0 205 306 18 81 chr2 10943909 10944020 -242312563 - MIR SINE MIR -87 121 18 258 189 0 0 chr2 10944701 10944754 -242311829 - MIR SINE MIR -86 122 70 219 272 29 68 chr2 10945042 10945145 -242311438 - MIR SINE MIR -52 210 112 807 43 17 77 chr2 10945868 10945985 -242310598 + LTR17 LTR ERV1 183 292 -488 438 194 65 24 chr2 10946138 10946262 -242310321 + L1MC4 LINE L1 6447 6575 -1467 1458 171 79 11 chr2 10946267 10946579 -242310004 + MER61B LTR ERV1 1 425 0 409 126 69 58 chr2 10946632 10946806 -242309777 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 757 208 10 78 chr2 10946825 10947017 -242309566 + L1MC4a LINE L1 6600 6778 -1030 4095 132 7 65 chr2 10947334 10948068 -242308515 - LTR8 LTR ERV1 0 691 1 231 125 0 0 chr2 10948384 10948424 -242308159 + (CA)n Simple_repeat Simple_repeat 1 40 0 248 250 45 34 chr2 10948470 10948558 -242308025 - L1MC/D LINE L1 -1893 5915 5827 330 261 74 1 chr2 10949560 10949744 -242306839 + LTR16A1 LTR ERVL 190 418 -39 1850 129 10 10 chr2 10949744 10950039 -242306544 + AluJo SINE Alu 1 295 -17 330 261 74 1 chr2 10950039 10950080 -242306503 + LTR16A1 LTR ERVL 418 455 -2 1223 275 72 27 chr2 10950362 10950849 -242305734 + MLT1J LTR MaLR 1 509 -2 2286 58 54 0 chr2 10951907 10952202 -242304381 - AluY SINE Alu 0 311 1 203 296 102 45 chr2 10952457 10952633 -242303950 + MIR3 SINE MIR 13 198 -10 1686 219 21 5 chr2 10953184 10953559 -242303024 + L1MB4 LINE L1 5778 6158 -22 2362 51 0 32 chr2 10953561 10953875 -242302708 - AluY SINE Alu -7 304 1 2065 106 3 0 chr2 10954727 10955111 -242301472 + AluSx SINE Alu 1 385 0 239 167 0 24 chr2 10955624 10955666 -242300917 - L2 LINE L2 -19 3294 3254 289 206 46 15 chr2 10956010 10956141 -242300442 + CT-rich Low_complexity Low_complexity 4 138 0 2100 96 0 0 chr2 10956141 10956421 -242300162 - AluSx SINE Alu -32 280 1 249 215 15 62 chr2 10956469 10956534 -242300049 - MIR SINE MIR -149 113 52 1919 130 7 3 chr2 10956853 10957153 -242299430 - AluSx SINE Alu -11 301 1 2091 126 0 0 chr2 10957327 10957629 -242298954 + AluSx SINE Alu 5 306 -6 819 215 136 68 chr2 10957787 10958114 -242298469 + MLT2D LTR ERVL 7 310 -104 327 49 0 0 chr2 10958114 10958155 -242298428 + (TC)n Simple_repeat Simple_repeat 2 42 0 420 20 0 0 chr2 10958158 10958207 -242298376 + (TG)n Simple_repeat Simple_repeat 2 50 0 819 215 136 68 chr2 10958207 10958257 -242298326 + MLT2D LTR ERVL 311 414 0 250 362 24 16 chr2 10958650 10958777 -242297806 + L2 LINE L2 3172 3299 -14 1922 121 3 10 chr2 10958957 10959263 -242297320 + AluSx SINE Alu 1 304 -8 1584 163 74 41 chr2 10959294 10959657 -242296926 - THE1C LTR MaLR 0 375 1 1150 140 6 0 chr2 10959958 10960136 -242296447 - FRAM SINE Alu 0 176 1 2094 123 7 0 chr2 10961411 10961744 -242294839 - AluSx SINE Alu 0 335 1 330 326 71 24 chr2 10961748 10962294 -242294289 - L1M4 LINE L1 -3334 2812 2241 2062 116 0 0 chr2 10962323 10962627 -242293956 - AluSx SINE Alu 0 304 1 2724 194 17 3 chr2 10962884 10963472 -242293111 + L1MB7 LINE L1 4103 4698 -1448 2213 107 3 0 chr2 10963824 10964134 -242292449 + AluY SINE Alu 1 311 0 311 220 59 25 chr2 10964230 10964348 -242292235 - MER65B LTR ERV1 -409 122 1 3087 198 30 16 chr2 10964348 10965577 -242291006 + L1MB7 LINE L1 4697 5952 -169 274 98 98 6 chr2 10965584 10965747 -242290836 + (TA)n Simple_repeat Simple_repeat 2 179 0 * 302 107 54 42 chr2 10965737 10965905 -242290678 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 225 181 11 53 chr2 10965905 10965999 -242290584 + (TTAA)n Simple_repeat Simple_repeat 4 93 0 248 98 98 18 chr2 10966000 10966163 -242290420 + (TA)n Simple_repeat Simple_repeat 2 177 0 409 171 47 0 chr2 10966202 10966372 -242290211 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 409 171 47 0 chr2 10966392 10966562 -242290021 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 351 173 43 0 chr2 10966575 10966714 -242289869 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 448 162 48 0 chr2 10966725 10966892 -242289691 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 563 106 28 50 chr2 10966905 10967084 -242289499 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 22 0 0 0 chr2 10967084 10967106 -242289477 + AT_rich Low_complexity Low_complexity 1 22 0 1892 107 24 37 chr2 10967107 10967405 -242289178 - AluSx SINE Alu -18 294 1 1101 184 27 93 chr2 10967408 10967740 -242288843 + L1MB7 LINE L1 5853 6162 -22 180 0 0 0 chr2 10968107 10968127 -242288456 + (A)n Simple_repeat Simple_repeat 1 20 0 334 335 68 27 chr2 10969503 10969766 -242286817 - MLT1L LTR MaLR -171 444 171 212 346 25 0 chr2 10970060 10970141 -242286442 + L2 LINE L2 3104 3186 -86 1257 239 101 47 chr2 10970200 10970740 -242285843 - L2 LINE L2 -21 3292 2709 686 122 19 0 chr2 10970743 10970850 -242285733 - AluSg/x SINE Alu -5 304 196 225 297 14 0 chr2 10970950 10971024 -242285559 - L1MC4 LINE L1 -630 7412 7338 423 206 112 158 chr2 10971044 10971171 -242285412 - L1MC4 LINE L1 -796 7246 7115 2268 83 7 0 chr2 10971171 10971472 -242285111 + AluSq SINE Alu 1 303 -10 423 206 112 158 chr2 10971472 10971756 -242284827 - L1MC4 LINE L1 -927 7115 6854 2236 87 3 7 chr2 10971788 10972087 -242284496 + AluSp SINE Alu 1 298 -15 247 283 76 11 chr2 10972981 10973073 -242283510 + L2 LINE L2 3216 3313 0 1425 181 71 0 chr2 10973102 10973234 -242283349 + AluJo SINE Alu 1 122 -190 2024 94 7 7 chr2 10973234 10973541 -242283042 + AluSp SINE Alu 1 313 0 1425 181 71 0 chr2 10973541 10973689 -242282894 + AluJo SINE Alu 122 301 -11 264 88 53 0 chr2 10974625 10974682 -242281901 + CT-rich Low_complexity Low_complexity 1 60 0 278 293 40 0 chr2 10974682 10974757 -242281826 - L2 LINE L2 -1 3312 3235 1133 179 0 0 chr2 10975144 10975345 -242281238 - L1M3 LINE L1 -1002 5144 4944 2104 157 46 14 chr2 10975353 10975863 -242280720 + L1M3 LINE L1 5157 5685 -483 252 275 22 33 chr2 10976671 10976762 -242279821 - MIR3 SINE MIR -15 193 104 264 289 132 8 chr2 10976764 10976885 -242279698 + MIR SINE MIR 23 158 -104 2060 133 0 0 chr2 10977806 10978107 -242278476 + AluSx SINE Alu 1 301 -11 441 54 0 0 chr2 10978165 10978221 -242278362 + (TGGGGG)n Simple_repeat Simple_repeat 1 56 0 428 230 151 7 chr2 10978260 10978398 -242278185 + MIR SINE MIR 7 164 -98 767 196 10 85 chr2 10978398 10978514 -242278069 + MER5A DNA MER1_type 1 97 -92 648 216 132 0 chr2 10978514 10978681 -242277902 - MER53 DNA DNA 0 189 1 767 196 10 85 chr2 10978681 10978763 -242277820 + MER5A DNA MER1_type 97 184 -5 199 281 31 0 chr2 10980009 10980073 -242276510 + MIR SINE MIR 43 108 -100 1142 115 4 9 chr2 10980264 10980489 -242276094 + (GGAA)n Simple_repeat Simple_repeat 2 225 0 973 144 6 6 chr2 10980494 10980674 -242275909 + GA-rich Low_complexity Low_complexity 1 180 0 760 104 0 43 chr2 10980823 10981105 -242275478 + (TTCC)n Simple_repeat Simple_repeat 1 269 0 349 309 71 18 chr2 10981205 10981373 -242275210 - L3 LINE CR1 -241 1336 1160 886 53 0 0 chr2 10982034 10982148 -242274435 - AluY SINE Alu -11 300 187 468 279 111 38 chr2 10982148 10982425 -242274158 - L1MEc LINE L1 -3670 2545 2281 367 242 43 93 chr2 10982577 10982614 -242273969 - L1MC/D LINE L1 -2027 5781 5744 2282 80 3 7 chr2 10982614 10982916 -242273667 - AluSq SINE Alu -12 301 1 367 242 43 93 chr2 10982916 10983039 -242273544 - L1MC/D LINE L1 -2064 5744 5629 981 248 65 35 chr2 10983054 10983413 -242273170 + MLT1G3 LTR MaLR 1 336 -194 2368 205 69 0 chr2 10983477 10983969 -242272614 + MER68 LTR ERV1 36 561 -1 328 282 118 35 chr2 10984078 10984248 -242272335 + L1ME LINE L1 5604 5787 -334 836 136 30 8 chr2 10984292 10984424 -242272159 + FRAM SINE Alu 18 152 -24 1923 128 4 0 chr2 10984485 10984793 -242271790 + AluSx SINE Alu 1 309 0 256 185 46 0 chr2 10985598 10985663 -242270920 - MIR SINE MIR -108 100 33 332 197 39 110 chr2 10985838 10985965 -242270618 - L1MC4 LINE L1 -1 8041 7924 22 35 0 0 chr2 10986006 10986035 -242270548 + AT_rich Low_complexity Low_complexity 1 29 0 2201 102 0 10 chr2 10986044 10986348 -242270235 + AluSx SINE Alu 1 301 -11 1030 184 71 20 chr2 10986884 10987080 -242269503 + MIR SINE MIR 1 206 -56 238 269 84 50 chr2 10987176 10987295 -242269288 + MIR SINE MIR 22 144 -64 506 259 108 59 chr2 10987424 10987710 -242268873 - MLT1J2 LTR MaLR -114 336 37 1011 253 58 49 chr2 10987806 10987850 -242268733 + MLT1D LTR MaLR 158 200 -305 1525 188 0 45 chr2 10987850 10987978 -242268605 + AluJo SINE Alu 19 151 -161 2029 125 3 3 chr2 10987978 10988281 -242268302 + AluSp SINE Alu 1 303 -10 1525 188 0 45 chr2 10988281 10988460 -242268123 + AluJo SINE Alu 151 312 0 1011 253 58 49 chr2 10988460 10988743 -242267840 + MLT1D LTR MaLR 200 488 -17 345 254 114 0 chr2 10988768 10988882 -242267701 - MIR SINE MIR -127 135 9 1260 226 59 98 chr2 10989696 10990219 -242266364 - L1ME3A LINE L1 -4 6166 5664 1693 138 62 7 chr2 10990259 10990549 -242266034 + AluJb SINE Alu 1 306 -6 2374 82 0 0 chr2 10990975 10991279 -242265304 - AluSp SINE Alu -9 304 1 689 149 79 0 chr2 10991447 10991561 -242265022 - FLAM_C SINE Alu -19 124 2 1150 140 6 0 chr2 10992279 10992457 -242264126 + FRAM SINE Alu 1 176 0 1584 163 74 41 chr2 10992758 10993121 -242263462 + THE1C LTR MaLR 1 375 0 1858 142 7 3 chr2 10993152 10993455 -242263128 - AluSx SINE Alu -8 304 1 264 77 0 0 chr2 10993482 10993521 -242263062 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 191 114 29 0 chr2 10993524 10993559 -242263024 + A-rich Low_complexity Low_complexity 2 37 0 454 286 106 12 chr2 10993683 10993844 -242262739 + MIR SINE MIR 80 255 -7 334 341 23 15 chr2 10994627 10994759 -242261824 + MIR SINE MIR 78 210 -52 249 209 60 30 chr2 10995309 10995376 -242261207 - L2 LINE L2 -58 3255 3187 255 317 72 6 chr2 10997935 10998102 -242258481 - LTR16A LTR ERVL -152 298 121 363 181 14 0 chr2 10998951 10999023 -242257560 - MLT1J2 LTR MaLR -394 73 1 * 622 242 121 26 chr2 10999023 10999294 -242257289 + LTR16A LTR ERVL 154 450 0 2245 97 10 0 chr2 11000648 11000947 -242255636 + AluSx SINE Alu 1 302 -10 1402 161 47 67 chr2 11001023 11001322 -242255261 + AluJo SINE Alu 1 293 -19 2078 117 10 0 chr2 11001388 11001679 -242254904 - AluSg SINE Alu -16 294 1 212 237 0 0 chr2 11001878 11001916 -242254667 + polypurine Low_complexity Low_complexity 3 40 0 464 304 25 0 chr2 11002208 11002369 -242254214 + L1MEd LINE L1 4 168 -5951 1396 282 74 11 chr2 11002380 11002827 -242253756 + L1MEd LINE L1 206 680 -5439 2104 129 0 7 chr2 11002852 11003161 -242253422 + AluSx SINE Alu 1 307 -5 571 197 19 163 chr2 11003163 11003217 -242253366 - MIR SINE MIR -10 252 192 2182 117 3 0 chr2 11003217 11003526 -242253057 + AluSq SINE Alu 1 310 -3 571 197 19 163 chr2 11003526 11003735 -242252848 - MIR SINE MIR -70 192 27 233 270 24 75 chr2 11003778 11003937 -242252646 + L1MEd LINE L1 780 915 -5204 1129 158 6 0 chr2 11003937 11004108 -242252475 + FAM SINE Alu 1 172 -3 233 270 24 75 chr2 11004108 11004281 -242252302 + L1MEd LINE L1 915 1095 -5024 2322 97 0 0 chr2 11004282 11004590 -242251993 + AluSc SINE Alu 1 308 -1 270 304 59 59 chr2 11004673 11005117 -242251466 + L1MEd LINE L1 1231 1674 -4455 2194 108 7 0 chr2 11005406 11005711 -242250872 + AluSx SINE Alu 1 307 -5 262 375 155 0 chr2 11005733 11005901 -242250682 - L2 LINE L2 -464 2850 2657 193 274 0 0 chr2 11006177 11006228 -242250355 + L2 LINE L2 3262 3312 -1 297 345 96 10 chr2 11007296 11007493 -242249090 + MIR SINE MIR 20 233 -29 2299 94 0 3 chr2 11007817 11008124 -242248459 - AluSq SINE Alu -7 306 1 2933 54 6 0 chr2 11008124 11008475 -242248108 - THE1A LTR MaLR -2 353 1 300 285 15 85 chr2 11008536 11008599 -242247984 + MIR SINE MIR 102 153 -109 1433 217 64 87 chr2 11008599 11009128 -242247455 - MLT2B1 LTR ERVL 0 520 4 300 285 15 85 chr2 11009128 11009194 -242247389 + MIR SINE MIR 153 222 -40 1769 167 3 10 chr2 11009346 11009652 -242246931 + AluJo SINE Alu 1 304 -8 2200 109 3 0 chr2 11009652 11009954 -242246629 + AluSx SINE Alu 1 303 -9 227 308 185 0 chr2 11010778 11010908 -242245675 - L3 LINE CR1 -2 1575 1422 464 273 116 12 chr2 11011101 11011273 -242245310 + MIR SINE MIR 28 217 -45 3966 97 39 2 chr2 11011926 11012460 -242244123 - MER41A LTR ERV1 0 554 1 293 210 86 25 chr2 11012952 11013033 -242243550 - MIR SINE MIR 0 262 177 404 247 78 48 chr2 11015113 11015279 -242241304 + MIR SINE MIR 21 191 -71 1901 134 0 20 chr2 11015315 11015614 -242240969 - AluSx SINE Alu -19 293 1 2455 192 22 2 chr2 11015672 11016130 -242240453 + MLT1C LTR MaLR 1 467 0 1611 164 24 7 chr2 11016196 11016488 -242240095 + AluJo SINE Alu 1 297 -15 261 246 0 15 chr2 11016491 11016556 -242240027 - MIR SINE MIR -124 84 21 1571 167 4 4 chr2 11016597 11016854 -242239729 + AluJo SINE Alu 1 257 -55 355 219 41 82 chr2 11017875 11018021 -242238562 + MIR3 SINE MIR 15 154 -54 405 0 0 0 chr2 11018462 11018507 -242238076 + (CA)n Simple_repeat Simple_repeat 1 45 0 322 309 110 21 chr2 11019617 11019881 -242236702 - L2 LINE L2 -264 3049 2687 2553 188 87 18 chr2 11019883 11020269 -242236314 - L1MB1 LINE L1 -101 6067 5624 2208 155 106 8 chr2 11020269 11020469 -242236114 - MSTB LTR MaLR 0 426 247 186 71 0 0 chr2 11020469 11020497 -242236086 + (CAGAGA)n Simple_repeat Simple_repeat 2 29 0 2208 155 106 8 chr2 11020497 11020683 -242235900 - MSTB LTR MaLR -179 247 2 2553 188 87 18 chr2 11020683 11020893 -242235690 - L1MB1 LINE L1 -544 5624 5430 1443 115 0 0 chr2 11020893 11021113 -242235470 - AluSg/x SINE Alu 0 301 82 805 170 11 99 chr2 11021123 11021305 -242235278 - FRAM SINE Alu 0 166 1 1572 178 79 4 chr2 11021305 11021759 -242234824 - L1MB1 LINE L1 -727 5441 4933 446 141 0 0 chr2 11021757 11021835 -242234748 + L1 LINE L1 5159 5236 -910 * 237 324 59 10 chr2 11021909 11022011 -242234572 - L2 LINE L2 -939 2375 2269 919 158 30 0 chr2 11022075 11022239 -242234344 + L1MB7 LINE L1 5997 6165 -19 349 205 12 12 chr2 11022471 11022554 -242234029 - Charlie5 DNA MER1_type -27 2585 2503 2169 120 0 3 chr2 11022554 11022862 -242233721 + AluSx SINE Alu 1 307 -5 310 301 118 16 chr2 11022934 11023120 -242233463 + L1MEd LINE L1 1022 1226 -4893 * 1098 269 108 61 chr2 11023116 11023297 -242233286 + HAL1 LINE L1 1692 1863 -644 2448 62 3 0 chr2 11023297 11023606 -242232977 - AluY SINE Alu 0 311 2 1098 269 108 61 chr2 11023606 11024006 -242232577 + HAL1 LINE L1 1863 2320 -187 2751 106 21 35 chr2 11024006 11024371 -242232212 + MSTA LTR MaLR 2 362 -66 2303 93 0 0 chr2 11024371 11024681 -242231902 - AluSx SINE Alu -2 310 1 2751 106 21 35 chr2 11024681 11024748 -242231835 + MSTA LTR MaLR 362 428 0 1098 269 108 61 chr2 11024748 11024930 -242231653 + HAL1 LINE L1 2320 2492 -15 2224 116 0 0 chr2 11025268 11025569 -242231014 + AluSx SINE Alu 1 301 -11 2234 67 7 17 chr2 11025569 11025867 -242230716 + AluY SINE Alu 1 295 -16 2027 139 0 0 chr2 11026427 11026728 -242229855 - AluSx SINE Alu -11 301 1 418 277 80 0 chr2 11026834 11026971 -242229612 - L2 LINE L2 0 3313 3166 * 452 279 90 5 chr2 11026967 11027168 -242229415 + L2 LINE L2 1876 2093 -1221 1045 263 71 48 chr2 11027168 11027399 -242229184 + L2 LINE L2 2245 2492 -822 2302 98 3 0 chr2 11027399 11027705 -242228878 - AluSc SINE Alu -2 307 1 1045 263 71 48 chr2 11027705 11027911 -242228672 + L2 LINE L2 2492 2692 -622 2161 101 0 7 chr2 11028162 11028458 -242228125 - AluSg SINE Alu -16 294 1 298 120 0 0 chr2 11028747 11028797 -242227786 + Alu SINE Alu 249 298 -4 1925 82 86 0 chr2 11028837 11029105 -242227478 - AluSq SINE Alu -16 297 7 335 283 88 2 chr2 11029649 11029787 -242226796 + MIR SINE MIR 36 182 -61 3113 172 27 98 chr2 11030267 11030850 -242225733 + LTR8 LTR ERV1 1 521 -170 1924 107 7 14 chr2 11030850 11031130 -242225453 + AluSx SINE Alu 5 284 -28 207 0 0 0 chr2 11031130 11031153 -242225430 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 3113 172 27 98 chr2 11031161 11031321 -242225262 + LTR8 LTR ERV1 521 691 0 4016 78 73 84 chr2 11031435 11032105 -242224478 - MER4A LTR ERV1 -1 663 1 2252 91 3 0 chr2 11032150 11032448 -242224135 + AluSx SINE Alu 3 301 -11 2024 113 23 7 chr2 11032541 11032841 -242223742 + AluSg SINE Alu 1 305 -5 274 181 38 114 chr2 11032984 11033029 -242223554 - L1MC4 LINE L1 -433 7609 7562 1618 184 0 46 chr2 11033029 11033355 -242223228 - AluJb SINE Alu 0 312 2 274 181 38 114 chr2 11033355 11033414 -242223169 - L1MC4 LINE L1 -480 7562 7513 210 139 28 46 chr2 11033520 11033628 -242222955 + (CGGGG)n Simple_repeat Simple_repeat 2 107 0 266 96 19 58 chr2 11034259 11034311 -242222272 + MIR3 SINE MIR 108 157 -51 1026 129 165 52 chr2 11034321 11034593 -242221990 - LTR48 LTR ERV1 -484 303 1 1991 99 12 46 chr2 11036427 11036572 -242220011 + AluSx SINE Alu 1 149 -163 2382 61 0 0 chr2 11036572 11036865 -242219718 + AluY SINE Alu 1 293 -18 1991 99 12 46 chr2 11036865 11037042 -242219541 + AluSx SINE Alu 149 312 0 225 289 0 62 chr2 11037200 11037297 -242219286 + MIR3 SINE MIR 111 201 -7 180 0 0 0 chr2 11038991 11039011 -242217572 + (A)n Simple_repeat Simple_repeat 1 20 0 1157 126 8 89 chr2 11039454 11039700 -242216883 - AluJo SINE Alu 0 312 87 1632 194 0 7 chr2 11039716 11040010 -242216573 - AluJo SINE Alu -20 292 1 220 269 134 0 chr2 11040241 11040308 -242216275 + MIR SINE MIR 113 188 -74 1176 93 11 6 chr2 11040783 11040995 -242215588 - AluY SINE Alu 0 312 100 2203 64 4 0 chr2 11041250 11041561 -242215022 - AluY SINE Alu 0 312 1 874 217 0 38 chr2 11041613 11041797 -242214786 + AluJo SINE Alu 2 178 -134 443 158 0 0 chr2 11041798 11041874 -242214709 - MER53 DNA DNA -113 76 1 275 292 4 17 chr2 11042124 11042262 -242214321 - MIR SINE MIR -43 219 85 186 71 0 0 chr2 11042974 11043002 -242213581 + (TA)n Simple_repeat Simple_repeat 2 29 0 2063 84 0 119 chr2 11043002 11043191 -242213392 - AluSp SINE Alu -8 295 85 9741 41 8 103 chr2 11043191 11044665 -242211918 - SVA Other Other 0 1386 53 180 0 0 0 chr2 11044665 11044685 -242211898 + (GGGAGA)n Simple_repeat Simple_repeat 3 22 0 2063 84 0 119 chr2 11044685 11044829 -242211754 - AluSp SINE Alu -216 87 1 560 168 0 99 chr2 11045211 11045269 -242211314 - MER53 DNA DNA -44 145 83 1978 108 3 17 chr2 11045269 11045565 -242211018 + AluSx SINE Alu 6 297 -15 560 168 0 99 chr2 11045565 11045667 -242210916 - MER53 DNA DNA -106 83 1 2236 100 7 0 chr2 11045822 11046121 -242210462 + AluSx SINE Alu 5 305 -7 2300 70 7 17 chr2 11046654 11046952 -242209631 + AluY SINE Alu 1 295 -16 322 331 0 0 chr2 11047656 11047813 -242208770 + C-rich Low_complexity Low_complexity 1 157 0 2396 70 0 7 chr2 11048202 11048500 -242208083 - AluY SINE Alu -15 296 1 1244 148 148 61 chr2 11049359 11049509 -242207074 - AluJo SINE Alu -11 301 165 2353 84 0 0 chr2 11049509 11049795 -242206788 - AluSx SINE Alu -26 286 1 1244 148 148 61 chr2 11049795 11049921 -242206662 - AluJo SINE Alu -147 165 1 432 164 218 0 chr2 11049922 11050032 -242206551 - L1 LINE L1 -780 5366 5233 271 274 27 14 chr2 11050506 11050579 -242206004 + MIR3 SINE MIR 90 163 -45 2215 107 0 10 chr2 11050588 11050888 -242205695 - AluSg SINE Alu -13 297 1 1706 95 0 17 chr2 11051122 11051377 -242205206 - AluSx SINE Alu 0 307 57 26 30 0 0 chr2 11051466 11051499 -242205084 + AT_rich Low_complexity Low_complexity 1 33 0 2431 82 0 0 chr2 11052844 11053148 -242203435 - AluSx SINE Alu -8 304 1 2832 0 0 0 chr2 11053158 11053460 -242203123 - AluYa5 SINE Alu -9 302 1 26 0 0 0 chr2 11053597 11053623 -242202960 + AT_rich Low_complexity Low_complexity 1 26 0 2062 122 10 0 chr2 11053810 11054106 -242202477 + AluSx SINE Alu 1 299 -13 492 238 109 12 chr2 11055873 11056043 -242200540 - MIR SINE MIR -47 215 33 30 0 0 0 chr2 11056410 11056440 -242200143 + AT_rich Low_complexity Low_complexity 1 30 0 261 0 0 0 chr2 11057814 11057843 -242198740 + (TA)n Simple_repeat Simple_repeat 2 30 0 30 45 0 0 chr2 11057939 11057983 -242198600 + AT_rich Low_complexity Low_complexity 1 44 0 2203 110 3 0 chr2 11058264 11058565 -242198018 - AluSx SINE Alu -10 302 1 240 143 0 0 chr2 11059585 11059627 -242196956 + (TA)n Simple_repeat Simple_repeat 1 42 0 225 132 0 0 chr2 11061325 11061363 -242195220 + (CAT)n Simple_repeat Simple_repeat 1 38 0 190 212 0 0 chr2 11061610 11061643 -242194940 - L3 LINE CR1 -310 1267 1235 2291 95 0 7 chr2 11062079 11062412 -242194171 + AluSq SINE Alu 1 313 0 272 271 212 33 chr2 11062543 11062694 -242193889 - MER5A DNA MER1_type -11 178 1 1220 205 86 4 chr2 11063802 11064046 -242192537 + Tigger7 DNA MER2_type 1 264 -469 554 165 10 21 chr2 11064049 11064146 -242192437 + Tigger7 DNA MER2_type 2392 2487 0 2410 78 3 0 chr2 11064736 11065042 -242191541 - AluSx SINE Alu -5 307 1 2252 58 7 4 chr2 11065246 11065524 -242191059 - AluY SINE Alu 0 311 33 956 177 0 6 chr2 11065534 11065698 -242190885 + AluSg/x SINE Alu 147 309 -1 292 350 37 37 chr2 11066114 11066331 -242190252 - L3 LINE CR1 -286 1291 1075 1718 142 0 44 chr2 11066332 11066650 -242189933 + AluJo SINE Alu 1 305 0 22 0 0 0 chr2 11066993 11067015 -242189568 + AT_rich Low_complexity Low_complexity 1 22 0 1108 181 24 0 chr2 11068312 11068517 -242188066 - MER6B DNA MER2_type 0 210 1 26 64 0 0 chr2 11071128 11071175 -242185408 + AT_rich Low_complexity Low_complexity 1 47 0 189 0 0 0 chr2 11071540 11071561 -242185022 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 31 44 0 0 chr2 11071718 11071763 -242184820 + AT_rich Low_complexity Low_complexity 1 45 0 2075 149 0 0 chr2 11072138 11072447 -242184136 - AluSx SINE Alu -3 309 1 318 317 90 0 chr2 11072653 11072798 -242183785 - MIR SINE MIR 0 262 105 31 44 0 0 chr2 11074340 11074385 -242182198 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 11074567 11074589 -242181994 + AT_rich Low_complexity Low_complexity 1 22 0 2111 95 3 71 chr2 11075511 11075837 -242180746 - AluSx SINE Alu -8 304 1 1634 165 0 55 chr2 11075936 11076264 -242180319 - AluJb SINE Alu -2 310 1 339 289 161 55 chr2 11076376 11076745 -242179838 - L1M3 LINE L1 -400 5783 5373 236 325 0 0 chr2 11076792 11076875 -242179708 - L1M3 LINE L1 -852 5294 5212 267 302 87 12 chr2 11076894 11077066 -242179517 - L1M3 LINE L1 -1075 5071 4887 294 216 91 23 chr2 11077843 11077931 -242178652 - L2 LINE L2 0 3313 3220 810 218 60 30 chr2 11078807 11079041 -242177542 + Charlie1 DNA MER1_type 2 242 -2519 394 206 0 11 chr2 11079024 11079116 -242177467 + Charlie1 DNA MER1_type 2622 2712 -49 * 23 0 0 0 chr2 11079116 11079139 -242177444 + AT_rich Low_complexity Low_complexity 1 23 0 2428 59 3 0 chr2 11079139 11079429 -242177154 - AluY SINE Alu -19 292 2 267 95 0 48 chr2 11079434 11079476 -242177107 + Charlie1 DNA MER1_type 2703 2742 -19 466 243 70 61 chr2 11079573 11079762 -242176821 + L1ME3A LINE L1 5977 6169 -1 320 316 86 0 chr2 11079919 11080071 -242176512 + L1ME4a LINE L1 5861 6025 -96 769 289 85 61 chr2 11081026 11081683 -242174900 - HAL1 LINE L1 -1091 1416 744 200 345 48 36 chr2 11082311 11082395 -242174188 + L2 LINE L2 3157 3241 -31 2093 136 0 0 chr2 11082461 11082756 -242173827 + AluSq SINE Alu 1 295 -18 210 245 0 0 chr2 11083336 11083385 -242173198 + (TAG)n Simple_repeat Simple_repeat 1 49 0 490 315 55 15 chr2 11083410 11083610 -242172973 - MIR SINE MIR -54 208 1 684 270 25 0 chr2 11083721 11083884 -242172699 - FAM SINE Alu -4 171 5 44 75 0 0 chr2 11084673 11084766 -242171817 + AT_rich Low_complexity Low_complexity 1 93 0 2057 137 19 3 chr2 11085220 11085527 -242171056 - AluSx SINE Alu 0 312 1 744 235 155 0 chr2 11085842 11086055 -242170528 + MIR SINE MIR 14 259 -3 242 213 43 32 chr2 11086161 11086255 -242170328 + L1ME4a LINE L1 6021 6115 -6 504 222 117 37 chr2 11086513 11086675 -242169908 - MIR SINE MIR -46 216 42 1795 149 0 67 chr2 11086959 11087275 -242169308 - AluJo SINE Alu -17 295 1 995 187 0 6 chr2 11088542 11088708 -242167875 - AluJb SINE Alu -15 297 133 616 341 127 25 chr2 11091330 11091983 -242164600 + L2 LINE L2 2167 2886 -428 902 135 0 118 chr2 11094851 11095029 -242161554 - AluSg/x SINE Alu -19 291 135 1124 102 0 107 chr2 11095045 11095241 -242161342 - AluSg/x SINE Alu -1 309 135 2341 104 0 0 chr2 11095259 11095567 -242161016 - AluSg1 SINE Alu -1 308 1 22 35 0 0 chr2 11095593 11095622 -242160961 + AT_rich Low_complexity Low_complexity 1 29 0 333 335 47 34 chr2 11096399 11096586 -242159997 - MIR SINE MIR -50 212 20 23 54 0 0 chr2 11096792 11096829 -242159754 + AT_rich Low_complexity Low_complexity 1 37 0 1871 127 0 41 chr2 11097762 11098054 -242158529 + AluSx SINE Alu 1 280 -32 186 71 0 0 chr2 11098054 11098082 -242158501 + (CAAT)n Simple_repeat Simple_repeat 4 31 0 488 131 155 0 chr2 11098194 11098278 -242158305 - FRAM SINE Alu -13 163 67 1512 181 71 0 chr2 11098413 11098561 -242158022 - AluJo SINE Alu -11 301 165 2143 91 7 7 chr2 11098561 11098868 -242157715 - AluSp SINE Alu 0 313 1 1512 181 71 0 chr2 11098868 11099000 -242157583 - AluJo SINE Alu -147 165 1 238 283 76 11 chr2 11099029 11099121 -242157462 - L2 LINE L2 0 3313 3216 21 57 0 0 chr2 11099969 11100004 -242156579 + AT_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr2 11100752 11100779 -242155804 + AT_rich Low_complexity Low_complexity 1 27 0 291 335 152 0 chr2 11101887 11102051 -242154532 + L1ME LINE L1 5533 5721 -400 306 307 10 53 chr2 11102078 11102209 -242154374 - MIR3 SINE MIR -8 200 72 21 0 0 0 chr2 11103275 11103296 -242153287 + AT_rich Low_complexity Low_complexity 1 21 0 604 238 92 6 chr2 11103414 11103578 -242153005 - MER3 DNA MER1_type -4 205 28 274 250 129 40 chr2 11103611 11103735 -242152848 - MIR SINE MIR -55 153 19 53 49 0 0 chr2 11103976 11104057 -242152526 + AT_rich Low_complexity Low_complexity 1 81 0 555 177 80 0 chr2 11104072 11104185 -242152398 - FLAM_A SINE Alu -11 122 1 1875 169 7 3 chr2 11105185 11105493 -242151090 + AluJb SINE Alu 1 309 -3 195 114 0 0 chr2 11107318 11107353 -242149230 + (CA)n Simple_repeat Simple_repeat 2 36 0 2182 255 24 38 chr2 11107931 11108957 -242147626 + L1MC4 LINE L1 5975 7009 -1033 199 393 28 28 chr2 11109071 11109249 -242147334 - L2 LINE L2 -461 2853 2676 2103 118 3 34 chr2 11109740 11110062 -242146521 - AluSx SINE Alu 0 312 1 622 263 81 0 chr2 11110487 11110647 -242145936 - MER58C DNA MER1_type -6 209 37 1903 146 0 17 chr2 11110681 11110983 -242145600 - AluSx SINE Alu -15 297 1 323 286 150 0 chr2 11111337 11111470 -242145113 + L1ME3A LINE L1 5258 5410 -949 1802 171 3 3 chr2 11111486 11111784 -242144799 + AluJo SINE Alu 1 298 -14 343 315 116 31 chr2 11111862 11112310 -242144273 + L1ME3A LINE L1 5440 5925 -245 733 122 0 0 chr2 11112542 11112649 -242143934 + U6 snRNA snRNA 1 107 0 208 27 54 27 chr2 11112658 11112695 -242143888 + (TAAAAA)n Simple_repeat Simple_repeat 1 38 0 2268 101 0 3 chr2 11115425 11115723 -242140860 + AluSq SINE Alu 3 299 -14 310 172 69 0 chr2 11115920 11115978 -242140605 + Alu SINE Alu 223 284 -16 238 134 0 61 chr2 11115991 11116073 -242140510 + (GGA)n Simple_repeat Simple_repeat 3 79 0 2118 92 7 4 chr2 11116650 11116931 -242139652 + AluSg SINE Alu 1 282 -28 1065 132 19 13 chr2 11116998 11117157 -242139426 + FRAM SINE Alu 1 156 -20 25 0 0 0 chr2 11117159 11117184 -242139399 + AT_rich Low_complexity Low_complexity 1 25 0 1072 221 231 5 chr2 11117759 11118162 -242138421 + L1MD3 LINE L1 5548 6041 -1954 * 1635 203 62 10 chr2 11117891 11118291 -242138292 + L1MB8 LINE L1 5757 6177 -1 2243 99 3 3 chr2 11119341 11119644 -242136939 + AluSg SINE Alu 1 303 -7 3567 172 52 117 chr2 11120189 11121112 -242135471 + L1MC/D LINE L1 3887 4869 -1464 1832 167 0 0 chr2 11121112 11121400 -242135183 + AluJo SINE Alu 1 288 -24 3567 172 52 117 chr2 11121400 11122028 -242134555 + L1MC/D LINE L1 4869 5537 -796 2150 99 17 3 chr2 11122028 11122320 -242134263 + AluSx SINE Alu 1 296 -16 2804 22 0 3 chr2 11122322 11122641 -242133942 + AluYb8 SINE Alu 1 318 0 3567 172 52 117 chr2 11122641 11123098 -242133485 + L1MC/D LINE L1 5538 5792 -541 977 173 71 74 chr2 11123221 11123430 -242133153 - L1MC2 LINE L1 -176 6168 5959 3129 127 12 0 chr2 11123430 11123917 -242132666 - L1PB1 LINE L1 -13 6138 5646 977 173 71 74 chr2 11123917 11124030 -242132553 - L1MC2 LINE L1 -385 5959 5847 3459 143 51 22 chr2 11124036 11124691 -242131892 - L1MA8 LINE L1 0 6291 5614 2120 128 0 3 chr2 11124691 11124996 -242131587 - AluSx SINE Alu -8 304 1 3459 143 51 22 chr2 11124996 11125025 -242131558 - L1MA8 LINE L1 -677 5614 5587 3033 211 14 24 chr2 11125025 11126072 -242130511 + L1MCa LINE L1 2191 3227 -3199 314 210 0 0 chr2 11126220 11126282 -242130301 - MLT1B LTR MaLR -221 169 108 2202 116 0 13 chr2 11126316 11126619 -242129964 + AluSq SINE Alu 1 299 -14 355 235 101 27 chr2 11126991 11127140 -242129443 + HAL1 LINE L1 1428 1587 -920 1973 101 4 14 chr2 11127243 11127521 -242129062 + AluSx SINE Alu 1 275 -37 332 22 22 0 chr2 11127660 11127705 -242128878 + (TG)n Simple_repeat Simple_repeat 2 47 0 3002 205 20 29 chr2 11127727 11128016 -242128567 + L1MB7 LINE L1 4483 4773 -1373 1594 169 11 7 chr2 11128016 11128288 -242128295 + AluJo SINE Alu 1 273 -39 3002 205 20 29 chr2 11128288 11128765 -242127818 + L1MB7 LINE L1 4773 5242 -904 1075 230 126 25 chr2 11128771 11129127 -242127456 + L1MB7 LINE L1 5402 5793 -369 1758 252 94 73 chr2 11129135 11129858 -242126725 - MER21B LTR ERV1 -125 738 1 1604 243 23 0 chr2 11129858 11130245 -242126338 + L1MB7 LINE L1 5787 6182 -2 597 231 48 16 chr2 11130478 11130664 -242125919 + L1ME1 LINE L1 5701 5892 -274 555 286 38 54 chr2 11130661 11130976 -242125607 + L1MC5 LINE L1 1073 1382 -5014 * 374 303 47 31 chr2 11130974 11131228 -242125355 + L1M4 LINE L1 4748 5005 -1141 * 269 115 39 19 chr2 11131229 11131281 -242125302 + MLT1A1 LTR MaLR 1 53 -312 733 236 40 0 chr2 11131836 11132010 -242124573 + MLT1A1 LTR MaLR 170 350 -15 586 257 56 34 chr2 11132547 11132883 -242123700 + LTR35 LTR ERV1 350 618 0 451 214 247 6 chr2 11132941 11133119 -242123464 + L1MC4 LINE L1 7559 7779 -263 764 188 130 39 chr2 11133119 11133327 -242123256 + Cheshire DNA MER1_type 1803 2029 -391 2198 158 98 15 chr2 11133327 11133793 -242122790 + L1MC3 LINE L1 6249 6316 -17 1790 179 77 3 chr2 11133794 11134173 -242122410 + Cheshire DNA MER1_type 2014 2420 0 469 165 9 35 chr2 11134175 11134290 -242122293 + L1MC5 LINE L1 7806 7917 -44 1614 173 26 29 chr2 11134320 11134626 -242121957 + AluJo SINE Alu 1 305 -7 305 266 15 38 chr2 11134686 11134892 -242121691 + L1MC5 LINE L1 3649 3848 -2367 68 24 0 0 chr2 11135046 11135128 -242121455 + AT_rich Low_complexity Low_complexity 1 82 0 527 313 36 27 chr2 11135140 11135475 -242121108 + L1MC5 LINE L1 5423 5760 -2117 297 218 142 120 chr2 11135550 11135775 -242120808 + L1MC5 LINE L1 6897 7126 -904 628 232 35 51 chr2 11135887 11136141 -242120442 + L1MC5 LINE L1 7238 7487 -543 2095 206 27 29 chr2 11136645 11137168 -242119415 + L1MB7 LINE L1 5595 6116 -68 918 219 158 50 chr2 11137678 11138135 -242118448 + Charlie7 DNA MER1_type 2090 2595 -17 2332 96 0 3 chr2 11138320 11138622 -242117961 + AluSq SINE Alu 2 302 -11 1333 97 11 5 chr2 11138744 11138929 -242117654 - AluSq SINE Alu -127 186 1 233 297 36 9 chr2 11138996 11139107 -242117476 + L2 LINE L2 2624 2737 -577 952 103 82 0 chr2 11139132 11139278 -242117305 - AluSg/x SINE Alu -1 311 154 1424 181 15 39 chr2 11139403 11139740 -242116843 + MER33 DNA MER1_type 1 319 -5 22 0 0 0 chr2 11139890 11139912 -242116671 + AT_rich Low_complexity Low_complexity 1 22 0 3140 252 99 68 chr2 11140175 11141626 -242114957 + L2 LINE L2 1426 2922 -392 1429 217 39 39 chr2 11141805 11141917 -242114666 + L1MC4 LINE L1 6528 6639 -1403 2245 108 0 10 chr2 11141917 11142223 -242114360 + AluSx SINE Alu 1 303 -9 1429 217 39 39 chr2 11142223 11142268 -242114315 + L1MC4 LINE L1 6639 6683 -1359 306 0 0 0 chr2 11142268 11142302 -242114281 + (CA)n Simple_repeat Simple_repeat 2 35 0 1429 217 39 39 chr2 11142302 11142530 -242114053 + L1MC4 LINE L1 6682 6914 -1128 597 193 62 0 chr2 11142564 11142709 -242113874 + L1MD3 LINE L1 7834 7987 -8 530 170 38 0 chr2 11142714 11142820 -242113763 + L1MC4 LINE L1 6898 7007 -1035 * 734 202 118 11 chr2 11142797 11142975 -242113608 + L1MC4 LINE L1 7525 7721 -321 622 267 163 48 chr2 11143026 11143400 -242113183 + L2 LINE L2 2897 3313 0 2354 84 0 0 chr2 11144137 11144435 -242112148 - AluSc SINE Alu -11 298 1 866 158 13 19 chr2 11144530 11144688 -242111895 - MER2 DNA MER2_type -1 344 188 1187 174 0 0 chr2 11146013 11146209 -242110374 - MER2 DNA MER2_type -149 196 1 1794 167 40 22 chr2 11146510 11146881 -242109702 + L1MC1 LINE L1 5956 6333 0 473 318 64 98 chr2 11147104 11147277 -242109306 - L3 LINE CR1 -761 816 639 2438 83 3 0 chr2 11147277 11147579 -242109004 + AluSp SINE Alu 1 303 -10 473 318 64 98 chr2 11147579 11147852 -242108731 - L3 LINE CR1 -938 639 390 1756 175 7 3 chr2 11147852 11148149 -242108434 + AluJb SINE Alu 11 308 -4 473 318 64 98 chr2 11148149 11148249 -242108334 - L3 LINE CR1 -1187 390 288 248 233 276 17 chr2 11148648 11148764 -242107819 - MIR3 SINE MIR -21 187 42 22 70 0 0 chr2 11148973 11149016 -242107567 + AT_rich Low_complexity Low_complexity 1 43 0 22 56 0 0 chr2 11149838 11149874 -242106709 + AT_rich Low_complexity Low_complexity 1 36 0 318 127 113 0 chr2 11150538 11150609 -242105974 + L1ME4a LINE L1 6042 6120 -1 272 262 58 81 chr2 11150703 11150875 -242105708 - MIR SINE MIR -46 216 49 785 164 0 0 chr2 11151090 11151212 -242105371 + FLAM_A SINE Alu 4 125 -8 203 193 18 18 chr2 11151520 11151577 -242105006 + (CA)n Simple_repeat Simple_repeat 1 57 0 737 158 0 0 chr2 11152615 11152729 -242103854 + FLAM_A SINE Alu 2 115 -18 2166 99 0 3 chr2 11153564 11153857 -242102726 + AluSx SINE Alu 1 292 -20 846 288 90 54 chr2 11154018 11154386 -242102197 - L2 LINE L2 -1062 2252 1872 433 301 52 42 chr2 11154595 11154788 -242101795 - MIR SINE MIR -11 251 57 21 57 0 0 chr2 11154824 11154859 -242101724 + AT_rich Low_complexity Low_complexity 1 35 0 1830 137 158 12 chr2 11155059 11155401 -242101182 + MSTA LTR MaLR 1 392 -36 189 298 88 35 chr2 11155448 11155505 -242101078 + MIR SINE MIR 16 75 -133 206 295 167 0 chr2 11155531 11155609 -242100974 - L2 LINE L2 -1356 1958 1868 184 218 127 55 chr2 11155622 11155677 -242100906 + MIR SINE MIR 83 141 -67 322 123 14 123 chr2 11155784 11155857 -242100726 + MER96B DNA MER1_type? 168 232 -185 * 918 166 91 58 chr2 11155856 11156097 -242100486 + MER96B DNA MER1_type? 169 417 0 2422 57 3 13 chr2 11156173 11156474 -242100109 + AluY SINE Alu 1 298 -13 211 167 0 42 chr2 11156481 11156529 -242100054 + GA-rich Low_complexity Low_complexity 2 47 0 1930 131 0 36 chr2 11157080 11157385 -242099198 - AluSx SINE Alu -18 294 1 2208 106 0 0 chr2 11157971 11158263 -242098320 + AluSx SINE Alu 1 292 -20 685 0 24 0 chr2 11158263 11158348 -242098235 + (GA)n Simple_repeat Simple_repeat 2 88 0 225 338 28 0 chr2 11159314 11159459 -242097124 + L1ME3A LINE L1 5689 5837 -284 234 266 278 6 chr2 11159873 11160046 -242096537 - L1M4 LINE L1 -1538 4608 4389 496 237 89 7 chr2 11160266 11160401 -242096182 + L1ME3A LINE L1 5993 6138 -32 2175 114 20 0 chr2 11160490 11160789 -242095794 + AluSx SINE Alu 1 305 -7 2335 80 0 23 chr2 11161283 11161585 -242094998 + AluSg SINE Alu 1 295 -15 1764 92 8 16 chr2 11162559 11162808 -242093775 - AluSq SINE Alu -16 297 51 1726 169 51 3 chr2 11162998 11163293 -242093290 + AluJb SINE Alu 1 309 -3 203 182 0 0 chr2 11165054 11165087 -242091496 + (CA)n Simple_repeat Simple_repeat 1 33 0 1296 166 42 33 chr2 11165181 11165518 -242091065 + Charlie1 DNA MER1_type 2303 2642 -119 1002 215 38 57 chr2 11165570 11165937 -242090646 - L1ME1 LINE L1 -5 6161 5802 2935 156 73 14 chr2 11165968 11166595 -242089988 + L1MC2 LINE L1 5670 6333 -11 23 0 0 0 chr2 11166742 11166765 -242089818 + AT_rich Low_complexity Low_complexity 1 23 0 227 224 104 15 chr2 11167326 11167393 -242089190 + L1MC/D LINE L1 5732 5804 -529 222 258 0 32 chr2 11168406 11168468 -242088115 - L2 LINE L2 -86 3227 3168 26 30 0 0 chr2 11168732 11168765 -242087818 + AT_rich Low_complexity Low_complexity 1 33 0 776 193 58 18 chr2 11169187 11169358 -242087225 + MER3 DNA MER1_type 32 209 0 21 36 0 0 chr2 11169480 11169508 -242087075 + AT_rich Low_complexity Low_complexity 1 28 0 258 340 158 14 chr2 11170620 11170829 -242085754 + MIR SINE MIR 3 241 -21 333 0 0 0 chr2 11170876 11170913 -242085670 + (TA)n Simple_repeat Simple_repeat 2 38 0 11423 37 11 1 chr2 11170915 11173077 -242083506 - L1PA5 LINE L1 0 6154 3976 411 308 107 16 chr2 11173185 11173488 -242083095 - MLT1J LTR MaLR -2 509 137 831 228 120 48 chr2 11173929 11174263 -242082320 + L1MEc LINE L1 73 430 -5966 704 217 100 11 chr2 11174300 11174480 -242082103 + L1MEc LINE L1 504 699 -5697 1952 131 7 7 chr2 11174481 11174772 -242081811 - AluSg SINE Alu -18 292 2 243 135 0 0 chr2 11174772 11174809 -242081774 + Alu SINE Alu 36 72 -229 1999 145 0 45 chr2 11175133 11175492 -242081091 + MLT1B LTR MaLR 2 344 -46 251 103 0 0 chr2 11175558 11175597 -242080986 + L1MA8 LINE L1 6234 6272 -19 28 29 0 0 chr2 11175674 11175709 -242080874 + AT_rich Low_complexity Low_complexity 1 35 0 273 306 111 9 chr2 11176520 11176628 -242079955 + MIR SINE MIR 19 137 -71 2088 170 31 12 chr2 11176971 11177388 -242079195 - L1MC1 LINE L1 0 6333 5909 1807 108 16 49 chr2 11177388 11177454 -242079129 + L1MC1 LINE L1 5608 5675 -658 2082 78 37 0 chr2 11177454 11177753 -242078830 + AluSc SINE Alu 1 309 0 1807 108 16 49 chr2 11177753 11177984 -242078599 + L1MC1 LINE L1 5675 5898 -435 191 80 0 0 chr2 11178040 11178065 -242078518 + L2 LINE L2 3217 3241 -31 725 203 83 95 chr2 11178412 11178654 -242077929 - MER8 DNA MER2_type 0 239 1 1118 331 172 43 chr2 11178852 11180873 -242075710 - L2 LINE L2 -437 2877 596 1726 174 4 0 chr2 11180887 11181162 -242075421 - AluJb SINE Alu -36 276 1 200 233 55 68 chr2 11181546 11181619 -242074964 - L2 LINE L2 -1 3271 3200 3710 36 0 0 chr2 11181933 11182373 -242074210 + L1PA3 LINE L1 5709 6148 -7 524 116 42 53 chr2 11183896 11183991 -242072592 + AluSg/x SINE Alu 199 292 -17 790 63 5 68 chr2 11184034 11184225 -242072358 + (GGA)n Simple_repeat Simple_repeat 2 180 0 237 65 0 0 chr2 11184459 11184490 -242072093 + (A)n Simple_repeat Simple_repeat 1 31 0 2227 105 0 7 chr2 11184645 11184940 -242071643 - AluSc SINE Alu -16 293 1 642 71 0 0 chr2 11184954 11185039 -242071544 - L1PA5 LINE L1 -2 6152 6068 272 322 74 16 chr2 11186112 11186233 -242070350 + L2 LINE L2 3180 3307 -6 1330 224 116 77 chr2 11186264 11187088 -242069495 + L2 LINE L2 2288 3313 0 596 203 129 25 chr2 11187086 11187249 -242069334 - MIR SINE MIR -13 249 70 * 6746 53 10 24 chr2 11187249 11187872 -242068711 + L1PA7 LINE L1 4983 5583 -571 1920 118 0 0 chr2 11187872 11188135 -242068448 + AluSx SINE Alu 1 263 -49 6746 53 10 24 chr2 11188135 11188680 -242067903 + L1PA7 LINE L1 5583 6134 -20 405 0 0 0 chr2 11188683 11188728 -242067855 + (TAA)n Simple_repeat Simple_repeat 3 47 0 764 291 81 73 chr2 11188925 11189469 -242067114 + L2 LINE L2 2768 3313 0 314 307 48 24 chr2 11189873 11190039 -242066544 + L1MEc LINE L1 44 213 -6183 874 123 23 0 chr2 11190356 11190486 -242066097 + FLAM_C SINE Alu 1 133 0 2498 63 0 0 chr2 11190680 11190982 -242065601 + AluY SINE Alu 1 302 -9 593 236 58 71 chr2 11191071 11191380 -242065203 + L1MEc LINE L1 667 971 -5234 2348 95 0 28 chr2 11191382 11191699 -242064884 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr2 11191904 11191925 -242064658 + AT_rich Low_complexity Low_complexity 1 21 0 2062 116 148 19 chr2 11191925 11192304 -242064279 + MSTA LTR MaLR 1 428 0 690 284 84 6 chr2 11192323 11192643 -242063940 + L1MEc LINE L1 2280 2624 -3591 321 266 78 47 chr2 11193849 11193977 -242062606 + L2 LINE L2 3182 3313 0 509 261 49 8 chr2 11195195 11195374 -242061209 + MIR SINE MIR 30 213 -49 2331 106 0 0 chr2 11195909 11196211 -242060372 + AluSx SINE Alu 1 302 -10 286 307 175 53 chr2 11197248 11197281 -242059302 + MIR SINE MIR 1 29 -233 2174 105 0 26 chr2 11197281 11197586 -242058997 + AluSg SINE Alu 2 298 -12 286 307 175 53 chr2 11197586 11197780 -242058803 + MIR SINE MIR 29 256 -6 330 297 7 41 chr2 11197954 11198099 -242058484 + L1ME4a LINE L1 5927 6066 -55 2288 95 48 28 chr2 11198172 11198529 -242058054 + THE1B LTR MaLR 1 364 0 33 43 0 0 chr2 11198612 11198659 -242057924 + AT_rich Low_complexity Low_complexity 1 47 0 198 0 0 0 chr2 11199395 11199417 -242057166 + (CA)n Simple_repeat Simple_repeat 1 22 0 1031 292 92 44 chr2 11200029 11200550 -242056033 - L2 LINE L2 -715 2599 2054 686 299 25 29 chr2 11200691 11200935 -242055648 + MIR SINE MIR 20 262 0 726 208 0 50 chr2 11201571 11201730 -242054853 + AluJo SINE Alu 16 166 -146 1892 129 58 0 chr2 11201730 11202039 -242054544 - Tigger3(Golem) DNA MER2_type -636 2393 2067 728 184 0 98 chr2 11202035 11202198 -242054385 - Tigger3(Golem) DNA MER2_type -2882 147 1 * 280 264 136 50 chr2 11202988 11203128 -242053455 - MIR SINE MIR -57 205 54 191 91 0 45 chr2 11203253 11203297 -242053286 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 500 77 0 0 chr2 11203445 11203510 -242053073 - AluY SINE Alu -12 299 235 1249 111 0 11 chr2 11203510 11203690 -242052893 - AluY SINE Alu -133 178 1 2113 224 31 4 chr2 11203718 11204196 -242052387 + L1MCa LINE L1 27 517 -5909 214 171 0 0 chr2 11204210 11204251 -242052332 + (TG)n Simple_repeat Simple_repeat 2 42 0 315 0 0 0 chr2 11204266 11204301 -242052282 + (TG)n Simple_repeat Simple_repeat 2 36 0 3086 159 70 45 chr2 11204316 11204972 -242051611 - L1M4c LINE L1 -4776 1608 929 2068 128 3 0 chr2 11204972 11205269 -242051314 + AluSx SINE Alu 1 298 -14 3086 159 70 45 chr2 11205269 11205383 -242051200 - L1M4c LINE L1 -5455 929 819 1688 183 0 11 chr2 11205510 11205795 -242050788 - AluJb SINE Alu -30 282 1 6207 175 90 57 chr2 11205796 11207381 -242049202 - L1MCa LINE L1 -4763 1663 27 2451 41 24 0 chr2 11207487 11207778 -242048805 + AluY SINE Alu 1 298 -13 6234 207 56 64 chr2 11207886 11208339 -242048244 + L1MCa LINE L1 1688 2143 -4283 2051 121 35 0 chr2 11208339 11208629 -242047954 + AluSx SINE Alu 1 300 -12 6234 207 56 64 chr2 11208629 11209562 -242047021 + L1MCa LINE L1 2143 3082 -3344 969 81 0 0 chr2 11209562 11209685 -242046898 + AluY SINE Alu 174 296 -15 6234 207 56 64 chr2 11209685 11210024 -242046559 + L1MCa LINE L1 3082 3422 -3004 225 0 0 0 chr2 11210024 11210049 -242046534 + (CAA)n Simple_repeat Simple_repeat 3 27 0 6234 207 56 64 chr2 11210049 11210543 -242046040 + L1MCa LINE L1 3422 3919 -2507 1661 152 42 30 chr2 11210543 11210716 -242045867 - MER44D DNA MER2_type -1882 609 440 2314 93 0 0 chr2 11210716 11211018 -242045565 + AluSq SINE Alu 1 302 -11 1661 152 42 30 chr2 11211018 11211179 -242045404 - MER44D DNA MER2_type -2051 440 1 6234 207 56 64 chr2 11211179 11211437 -242045146 + L1MCa LINE L1 3919 4178 -2248 2271 105 0 3 chr2 11211437 11211742 -242044841 - AluSx SINE Alu -8 304 1 6234 207 56 64 chr2 11211742 11212392 -242044191 + L1MCa LINE L1 4178 4911 -1515 1350 179 37 7 chr2 11212395 11212691 -242043892 + L1MCa LINE L1 1900 2204 -4222 722 163 18 54 chr2 11212708 11212874 -242043709 - L1MC2 LINE L1 -10 6334 6175 2194 97 0 39 chr2 11263897 11264207 -241992376 + AluSq SINE Alu 1 298 -15 279 291 120 49 chr2 11264292 11264437 -241992146 + MIR SINE MIR 3 153 -58 2441 42 0 3 chr2 11264539 11264857 -241991726 + AluY SINE Alu 1 317 0 2293 108 3 0 chr2 11266941 11267246 -241989337 + AluSx SINE Alu 6 311 -1 300 233 138 0 chr2 11267336 11267452 -241989131 + MIR3 SINE MIR 48 179 -29 2281 102 0 0 chr2 11267884 11268196 -241988387 + AluSq SINE Alu 1 312 0 1326 139 10 19 chr2 11269063 11269272 -241987311 - AluJo SINE Alu -105 207 1 350 69 17 0 chr2 11269382 11269440 -241987143 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 846 240 0 62 chr2 11269563 11269788 -241986795 + MIR SINE MIR 21 231 -31 354 305 85 0 chr2 11269916 11269953 -241986630 + L2 LINE L2 3143 3175 -97 1188 195 145 11 chr2 11269953 11270215 -241986368 - AluJo SINE Alu -4 298 2 354 305 85 0 chr2 11270215 11270295 -241986288 + L2 LINE L2 3175 3270 -2 466 276 119 27 chr2 11270392 11270577 -241986006 - MIR SINE MIR -12 250 49 2214 121 0 13 chr2 11271091 11271398 -241985185 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr2 11271398 11271422 -241985161 + (TA)n Simple_repeat Simple_repeat 2 25 0 557 181 69 0 chr2 11271821 11271937 -241984646 + MER3 DNA MER1_type 7 130 -79 206 54 0 54 chr2 11271937 11271974 -241984609 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 843 152 0 0 chr2 11272052 11272190 -241984393 + MLT1A1 LTR MaLR 1 138 -227 * 2034 149 109 92 chr2 11272189 11272805 -241983778 + MER4A LTR ERV1 37 662 -2 2043 149 41 70 chr2 11272816 11273356 -241983227 - MLT2A2 LTR ERVL 0 554 1 943 121 45 38 chr2 11273359 11273516 -241983067 + MLT1A1 LTR MaLR 208 365 0 510 243 19 0 chr2 11273517 11273624 -241982959 + MER5A DNA MER1_type 1 109 -80 219 139 28 0 chr2 11273656 11273692 -241982891 - MIR3 SINE MIR -50 158 122 539 135 15 2 chr2 11273819 11273912 -241982671 - MSTD LTR MaLR -54 413 244 682 151 0 0 chr2 11273919 11274025 -241982558 - MSTD LTR MaLR -290 106 1 315 95 11 7 chr2 11274450 11274505 -241982078 + AluJo SINE Alu 1 44 -258 231 301 81 62 chr2 11274505 11274814 -241981769 - L2 LINE L2 -1743 1571 1257 187 254 186 0 chr2 11274984 11275043 -241981540 - MIR3 SINE MIR -11 197 128 1894 127 3 7 chr2 11275043 11275335 -241981248 - MSTA LTR MaLR 0 428 138 846 141 15 0 chr2 11275474 11275609 -241980974 - MSTA LTR MaLR -291 137 1 253 295 42 11 chr2 11275611 11275706 -241980877 - MIR SINE MIR -78 130 33 197 321 0 0 chr2 11275861 11275914 -241980669 + MIR SINE MIR 95 147 -61 209 222 0 0 chr2 11276578 11276623 -241979960 + T-rich Low_complexity Low_complexity 1 45 0 311 364 128 5 chr2 11276871 11277058 -241979525 + L2 LINE L2 2862 3071 -201 2237 109 0 10 chr2 11277547 11277849 -241978734 - AluSc SINE Alu -10 299 1 1797 140 0 15 chr2 11278020 11278291 -241978292 + AluJo SINE Alu 26 292 -20 796 294 126 26 chr2 11278637 11278917 -241977666 - L1MC4a LINE L1 -1638 6170 5919 2276 121 7 0 chr2 11278917 11279224 -241977359 - AluSq SINE Alu -4 309 1 796 294 126 26 chr2 11279224 11279514 -241977069 - L1MC4a LINE L1 -1889 5919 5543 1792 164 3 35 chr2 11279816 11280133 -241976450 + AluJo SINE Alu 1 307 -5 1604 157 23 134 chr2 11281042 11281256 -241975327 + MLT1B LTR MaLR 1 143 -247 2178 125 0 3 chr2 11281256 11281552 -241975031 + AluSx SINE Alu 1 295 -17 1604 157 23 134 chr2 11281552 11281776 -241974807 + MLT1B LTR MaLR 143 390 0 234 0 0 0 chr2 11282132 11282158 -241974425 + (TG)n Simple_repeat Simple_repeat 1 26 0 762 152 0 23 chr2 11283002 11283134 -241973449 + FLAM_C SINE Alu 5 133 0 263 224 40 0 chr2 11283162 11283238 -241973345 + MER58 DNA MER1_type 2342 2420 0 479 273 120 0 chr2 11283455 11283638 -241972945 + L1ME3 LINE L1 5687 5891 -271 203 229 0 0 chr2 11284276 11284311 -241972272 + polypurine Low_complexity Low_complexity 2 36 0 1992 127 60 0 chr2 11285556 11285840 -241970743 - AluSq SINE Alu -12 301 1 314 169 31 0 chr2 11285897 11285962 -241970621 - L1MD3 LINE L1 -1016 6979 6913 335 274 123 19 chr2 11286143 11286249 -241970334 - MIR SINE MIR -112 150 34 245 314 39 0 chr2 11286662 11286764 -241969819 + MIR SINE MIR 128 233 -29 699 101 0 0 chr2 11286971 11287070 -241969513 - L1MB5 LINE L1 -7 6167 6069 316 282 141 0 chr2 11287257 11287342 -241969241 - L2 LINE L2 -4 3309 3213 228 305 124 38 chr2 11288356 11288461 -241968122 + L2 LINE L2 2992 3105 -167 238 353 52 0 chr2 11288743 11288859 -241967724 - L2 LINE L2 -9 3263 3142 267 359 60 28 chr2 11289071 11289288 -241967295 - MIR SINE MIR -30 232 9 361 258 92 58 chr2 11289662 11289782 -241966801 + L2 LINE L2 3141 3264 -8 284 178 14 0 chr2 11289782 11289855 -241966728 + (TCCA)n Simple_repeat Simple_repeat 2 75 0 824 162 6 0 chr2 11289893 11290060 -241966523 + (TCCA)n Simple_repeat Simple_repeat 4 171 0 333 0 0 0 chr2 11291179 11291216 -241965367 + (TG)n Simple_repeat Simple_repeat 1 37 0 536 168 112 0 chr2 11292265 11292372 -241964211 + 5S rRNA rRNA 2 120 -1 2343 43 0 18 chr2 11292518 11292797 -241963786 - AluY SINE Alu -14 297 24 2393 85 10 7 chr2 11293685 11293990 -241962593 + AluY SINE Alu 2 307 -4 2325 103 3 3 chr2 11294311 11294623 -241961960 - AluSq SINE Alu -1 312 1 230 317 17 0 chr2 11294648 11294708 -241961875 + L2 LINE L2 3141 3201 -71 1746 174 0 4 chr2 11294722 11295003 -241961580 + AluJb SINE Alu 1 280 -32 779 262 30 47 chr2 11295026 11295120 -241961463 - MIR SINE MIR -13 249 155 1641 229 92 79 chr2 11295120 11295737 -241960846 - MLT1E2 LTR MaLR -1 625 1 779 262 30 47 chr2 11295737 11295875 -241960708 - MIR SINE MIR -107 155 21 1834 184 0 7 chr2 11295968 11296277 -241960306 - AluJo SINE Alu -5 307 1 1006 93 0 7 chr2 11297102 11297242 -241959341 - MER85 DNA T2_type 0 139 1 3217 96 6 17 chr2 11297800 11298267 -241958316 + L1PA13 LINE L1 5702 6163 0 222 150 0 0 chr2 11298899 11298939 -241957644 + (CA)n Simple_repeat Simple_repeat 1 40 0 398 249 104 57 chr2 11299606 11299865 -241956718 + MLT1J LTR MaLR 1 269 -242 2221 119 27 0 chr2 11300090 11300385 -241956198 + AluSx SINE Alu 1 303 -9 391 329 43 7 chr2 11301170 11301310 -241955273 + MIR SINE MIR 3 147 -115 1214 214 43 46 chr2 11301377 11301424 -241955159 - HAL1 LINE L1 -87 2420 2374 2047 120 0 7 chr2 11301424 11301725 -241954858 - AluSx SINE Alu -13 299 1 1214 214 43 46 chr2 11301725 11302070 -241954513 - HAL1 LINE L1 -133 2374 2029 304 318 95 8 chr2 11302504 11302630 -241953953 - L2 LINE L2 0 3272 3136 822 172 15 0 chr2 11303366 11303500 -241953083 - FAM SINE Alu -16 169 34 1164 279 68 31 chr2 11304177 11304755 -241951828 + L1ME3A LINE L1 5353 5951 -219 288 186 204 115 chr2 11304826 11304909 -241951674 + MER5A DNA MER1_type 55 153 -36 1773 148 0 14 chr2 11304909 11305229 -241951354 - AluJb SINE Alu 0 316 1 288 186 204 115 chr2 11305229 11305257 -241951326 + MER5A DNA MER1_type 153 177 -12 932 75 15 0 chr2 11305321 11305454 -241951129 + AluSc SINE Alu 166 300 -9 259 148 68 34 chr2 11306311 11306399 -241950184 - L1ME4a LINE L1 -8 6113 6023 42 20 0 0 chr2 11306403 11306452 -241950131 + AT_rich Low_complexity Low_complexity 1 49 0 1865 137 3 0 chr2 11306452 11306737 -241949846 - AluSx SINE Alu -26 286 1 380 93 0 0 chr2 11306751 11306805 -241949778 - L1ME4a LINE L1 -109 6012 5959 502 281 102 12 chr2 11307713 11307880 -241948703 - MIR SINE MIR -14 248 67 195 100 0 0 chr2 11307898 11307928 -241948655 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 649 239 37 50 chr2 11308192 11308410 -241948173 - MIR SINE MIR -33 229 15 557 333 50 74 chr2 11309563 11310079 -241946504 - HAL1 LINE L1 -1519 988 485 234 0 0 0 chr2 11310251 11310277 -241946306 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 27 0 0 0 chr2 11310444 11310471 -241946112 + AT_rich Low_complexity Low_complexity 1 27 0 267 338 68 87 chr2 11310820 11311086 -241945497 - L2 LINE L2 -12 3260 3000 1930 134 3 3 chr2 11311822 11312129 -241944454 - AluSq SINE Alu -6 307 1 885 214 92 0 chr2 11312236 11312442 -241944141 - MIR SINE MIR -30 232 8 217 112 72 16 chr2 11312510 11312635 -241943948 + (TA)n Simple_repeat Simple_repeat 1 132 0 735 12 0 0 chr2 11313476 11313560 -241943023 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 239 188 0 31 chr2 11313560 11313624 -241942959 + CT-rich Low_complexity Low_complexity 4 65 0 * 298 170 18 27 chr2 11313618 11313730 -241942853 + (CTTG)n Simple_repeat Simple_repeat 2 112 0 * 371 183 14 42 chr2 11313725 11313867 -241942716 + CT-rich Low_complexity Low_complexity 5 142 0 193 116 23 23 chr2 11313909 11313952 -241942631 + CT-rich Low_complexity Low_complexity 4 46 0 524 243 6 0 chr2 11314286 11314455 -241942128 + (TG)n Simple_repeat Simple_repeat 1 170 0 423 0 0 0 chr2 11314800 11314847 -241941736 + (TG)n Simple_repeat Simple_repeat 1 47 0 812 124 0 8 chr2 11315592 11315721 -241940862 + FLAM_A SINE Alu 13 140 -2 759 154 16 0 chr2 11315743 11315866 -241940717 + FRAM SINE Alu 1 117 -59 2007 69 62 0 chr2 11315951 11316239 -241940344 - AluY SINE Alu -5 306 1 225 0 0 0 chr2 11316350 11316375 -241940208 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1932 140 0 3 chr2 11316388 11316680 -241939903 - AluSx SINE Alu -15 297 7 696 195 49 0 chr2 11317438 11317561 -241939022 - FLAM_C SINE Alu -13 130 2 254 188 21 0 chr2 11317668 11317716 -241938867 + AluY SINE Alu 119 167 -134 2095 113 0 0 chr2 11317716 11318007 -241938576 + AluSq SINE Alu 19 309 -4 436 351 71 24 chr2 11318051 11318347 -241938236 - L1ME4a LINE L1 -147 5974 5665 197 356 59 42 chr2 11318505 11318623 -241937960 + L2 LINE L2 3170 3289 -24 396 244 41 86 chr2 11318730 11318927 -241937656 - L1MC5 LINE L1 -33 7928 7741 231 338 52 13 chr2 11319029 11319183 -241937400 + MIR3 SINE MIR 32 191 -17 769 214 39 6 chr2 11319214 11319392 -241937191 + MER5A DNA MER1_type 3 186 -3 2130 120 0 0 chr2 11319621 11319921 -241936662 + AluSq SINE Alu 1 300 -13 503 225 101 7 chr2 11320046 11320184 -241936399 + L2 LINE L2 3161 3311 -2 1854 118 19 45 chr2 11320283 11320596 -241935987 + AluSg SINE Alu 1 305 -5 248 319 217 12 chr2 11320852 11321018 -241935565 - MIR SINE MIR -1 261 62 293 162 47 54 chr2 11321018 11321166 -241935417 + (TTATA)n Simple_repeat Simple_repeat 1 147 0 3736 171 14 43 chr2 11321170 11321661 -241934922 - L1MB7 LINE L1 -26 6158 5695 2216 100 0 0 chr2 11321661 11321961 -241934622 - AluSx SINE Alu -12 300 1 3736 171 14 43 chr2 11321961 11322229 -241934354 - L1MB7 LINE L1 -489 5695 5421 276 327 163 0 chr2 11322679 11322832 -241933751 + MIR SINE MIR 77 254 -8 325 239 0 0 chr2 11324243 11324310 -241932273 - MER6 DNA MER2_type 0 865 799 256 122 24 0 chr2 11324316 11324355 -241932228 + MER6 DNA MER2_type 738 777 -88 2176 104 27 99 chr2 11324355 11324720 -241931863 - MER1B DNA MER1_type 0 339 1 214 333 12 25 chr2 11324843 11324924 -241931659 - L2 LINE L2 -1 3271 3192 350 299 17 8 chr2 11325137 11325254 -241931329 - MIR SINE MIR -80 182 65 465 284 136 0 chr2 11325431 11325586 -241930997 + MER5A DNA MER1_type 14 189 0 524 261 118 33 chr2 11325773 11325984 -241930599 + MIR SINE MIR 14 242 -20 248 291 197 0 chr2 11326329 11326456 -241930127 - MIR SINE MIR -12 250 99 318 203 14 0 chr2 11326456 11326525 -241930058 - MER116 DNA Mariner -1 79 10 927 246 22 18 chr2 11326650 11326874 -241929709 - MIR SINE MIR -35 227 3 184 268 134 12 chr2 11327065 11327147 -241929436 - MIR SINE MIR -117 145 54 999 169 75 0 chr2 11327768 11327969 -241928614 - L1MD1 LINE L1 -1 6241 6026 550 151 0 0 chr2 11327972 11328058 -241928525 - FRAM SINE Alu -16 160 75 842 129 0 0 chr2 11328085 11328209 -241928374 - FLAM_C SINE Alu -19 124 1 4035 175 22 21 chr2 11328214 11329095 -241927488 - L1MD1 LINE L1 -206 6036 5152 746 112 0 0 chr2 11329096 11329203 -241927380 - AluJb SINE Alu 0 312 206 1075 199 46 42 chr2 11329204 11329510 -241927073 - L1MD1 LINE L1 -974 5172 4866 275 271 164 7 chr2 11330751 11330891 -241925692 - L1ME4a LINE L1 -16 6105 5944 1829 96 13 80 chr2 11331100 11331272 -241925311 - AluSx SINE Alu -18 294 149 2160 104 10 0 chr2 11331272 11331571 -241925012 - AluSx SINE Alu -10 302 1 1829 96 13 80 chr2 11331571 11331700 -241924883 - AluSx SINE Alu -163 149 13 2083 111 0 0 chr2 11332517 11332806 -241923777 - AluSx SINE Alu -23 289 1 2376 84 0 0 chr2 11333018 11333329 -241923254 - AluSq SINE Alu -2 311 1 1738 172 0 3 chr2 11333332 11333634 -241922949 - AluJb SINE Alu -11 301 1 305 341 98 12 chr2 11333927 11334091 -241922492 - MIR SINE MIR -65 197 20 617 297 96 33 chr2 11334466 11334830 -241921753 - L1ME4a LINE L1 -339 5827 5441 2034 222 51 27 chr2 11334962 11335489 -241921094 - MER44D DNA MER2_type 0 605 11 1733 194 144 2 chr2 11335505 11335908 -241920675 - L1MB7 LINE L1 -16 6168 5709 193 303 110 46 chr2 11335936 11336045 -241920538 - MIR SINE MIR -9 253 138 2055 114 7 0 chr2 11336052 11336342 -241920241 - AluSx SINE Alu -19 293 2 22 35 0 0 chr2 11336629 11336658 -241919925 + AT_rich Low_complexity Low_complexity 1 29 0 1655 167 3 17 chr2 11336673 11336972 -241919611 + AluJb SINE Alu 1 295 -17 304 315 111 0 chr2 11337176 11337284 -241919299 - L2 LINE L2 -1 3312 3193 2098 85 18 0 chr2 11338249 11338531 -241918052 + AluSx SINE Alu 11 297 -15 2544 39 3 3 chr2 11339975 11340286 -241916297 - AluY SINE Alu 0 311 1 1471 247 44 43 chr2 11340374 11340675 -241915908 - L1MC5 LINE L1 -46 7915 7616 2063 187 6 3 chr2 11340675 11341039 -241915544 + MLT1A1 LTR MaLR 1 365 0 1471 247 44 43 chr2 11341039 11341345 -241915238 - L1MC5 LINE L1 -345 7616 7307 804 249 13 6 chr2 11341483 11341688 -241914895 - L1MC4 LINE L1 -733 7228 7043 360 203 24 17 chr2 11341797 11341974 -241914609 + CT-rich Low_complexity Low_complexity 1 178 0 497 209 0 14 chr2 11341991 11342130 -241914453 + CT-rich Low_complexity Low_complexity 2 138 0 1736 179 7 0 chr2 11342130 11342437 -241914146 - AluJo SINE Alu -3 309 1 198 0 0 0 chr2 11342882 11342904 -241913679 + (T)n Simple_repeat Simple_repeat 1 22 0 193 327 151 62 chr2 11344854 11345212 -241911371 + L2 LINE L2 2809 3198 -74 766 244 106 5 chr2 11346471 11346688 -241909895 - MIR SINE MIR -13 249 11 1992 96 7 4 chr2 11347290 11347598 -241908985 - AluY SINE Alu 0 309 1 2070 116 3 0 chr2 11347894 11348196 -241908387 - AluSx SINE Alu -9 303 1 1741 86 19 4 chr2 11348258 11348514 -241908069 - AluSq SINE Alu -53 260 1 475 275 47 7 chr2 11348756 11348905 -241907678 + MIR SINE MIR 82 236 -26 2249 97 3 0 chr2 11348978 11349288 -241907295 + AluSx SINE Alu 1 311 -1 2079 104 10 0 chr2 11350026 11350325 -241906258 - AluSx SINE Alu -10 302 1 317 260 67 80 chr2 11350380 11350530 -241906053 + MIR SINE MIR 50 197 -65 300 227 56 61 chr2 11350804 11350982 -241905601 - HAL1 LINE L1 -121 2386 2208 1845 152 24 3 chr2 11350982 11351272 -241905311 + AluJo SINE Alu 1 296 -16 300 227 56 61 chr2 11351272 11351291 -241905292 - HAL1 LINE L1 -299 2208 2190 339 261 0 0 chr2 11351341 11351475 -241905108 + (CA)n Simple_repeat Simple_repeat 1 134 0 253 230 0 40 chr2 11351477 11351551 -241905032 - HAL1 LINE L1 -285 2222 2152 1846 243 161 14 chr2 11351597 11352334 -241904249 - HAL1 LINE L1 -485 2022 1177 1065 245 243 54 chr2 11352669 11353019 -241903564 - HAL1 LINE L1 -1324 1183 900 2176 119 10 3 chr2 11353019 11353330 -241903253 + AluSq SINE Alu 1 313 0 1065 245 243 54 chr2 11353330 11353974 -241902609 - HAL1 LINE L1 -1607 900 1 403 248 19 9 chr2 11354340 11354445 -241902138 + HAL1 LINE L1 742 847 -1660 536 58 0 0 chr2 11354789 11354858 -241901725 + tRNA-Glu-GAG tRNA tRNA 7 75 0 215 258 32 16 chr2 11355134 11355196 -241901387 - MIR SINE MIR -118 144 82 208 281 16 0 chr2 11355558 11355622 -241900961 + MIR SINE MIR 83 147 -61 2713 20 3 0 chr2 11355811 11356108 -241900475 + AluY SINE Alu 1 298 -13 1553 146 120 18 chr2 11356312 11356587 -241899996 + AluJb SINE Alu 1 303 -9 343 279 57 59 chr2 11357886 11358381 -241898202 + L1M4 LINE L1 2735 3228 -2918 338 281 60 126 chr2 11358388 11358635 -241897948 + L1ME4a LINE L1 5745 5958 -163 1543 173 55 14 chr2 11358635 11358981 -241897602 + L1MB8 LINE L1 5819 6178 0 338 281 60 126 chr2 11358981 11359131 -241897452 + L1ME4a LINE L1 5958 6116 -5 185 338 54 0 chr2 11363107 11363181 -241893402 + L3 LINE CR1 1023 1100 -477 513 326 28 11 chr2 11363185 11363363 -241893220 - MIR3 SINE MIR -12 196 16 2346 116 0 0 chr2 11363500 11363801 -241892782 + AluSq SINE Alu 1 301 -12 462 35 0 0 chr2 11364275 11364332 -241892251 + U2 snRNA snRNA 1 57 -131 2485 79 0 3 chr2 11364443 11364746 -241891837 - AluSq SINE Alu -11 302 1 904 78 0 0 chr2 11364746 11364861 -241891722 - 5S rRNA rRNA -6 115 1 257 336 21 28 chr2 11364935 11365078 -241891505 + MIR SINE MIR 2 143 -119 228 306 189 14 chr2 11365202 11365368 -241891215 + MIR SINE MIR 2 197 -56 2452 92 7 0 chr2 11366050 11366354 -241890229 - AluSx SINE Alu -6 306 1 294 278 0 11 chr2 11366677 11366762 -241889821 + MIR SINE MIR 63 143 -65 232 167 24 0 chr2 11366791 11366833 -241889750 - L2 LINE L2 -13 3300 3258 509 251 34 58 chr2 11367017 11367224 -241889359 - L2 LINE L2 -188 3084 2883 671 150 24 16 chr2 11367480 11367607 -241888976 + FLAM_A SINE Alu 1 128 -5 2009 157 36 14 chr2 11367834 11368190 -241888393 - THE1B LTR MaLR 0 364 1 297 294 119 0 chr2 11368195 11368304 -241888279 + MIR SINE MIR 27 148 -114 2058 135 7 0 chr2 11369116 11369397 -241887186 - AluSx SINE Alu -29 283 1 2117 120 0 3 chr2 11370185 11370505 -241886078 - AluSx SINE Alu 0 319 1 304 258 150 8 chr2 11370507 11370627 -241885956 - MIR SINE MIR -97 165 29 187 314 209 0 chr2 11370899 11371004 -241885579 + MIR3 SINE MIR 30 156 -52 213 300 17 0 chr2 11372574 11372634 -241883949 - L2 LINE L2 -235 3037 2977 341 299 157 6 chr2 11372658 11372849 -241883734 - MIR SINE MIR 0 262 46 863 252 37 47 chr2 11373057 11373207 -241883376 - L1MC5 LINE L1 -114 7847 7697 2073 135 27 0 chr2 11373207 11373503 -241883080 + AluSq SINE Alu 1 304 -9 863 252 37 47 chr2 11373503 11373757 -241882826 - L1MC5 LINE L1 -264 7697 7447 2471 64 0 3 chr2 11374793 11375091 -241881492 - AluY SINE Alu -14 297 1 211 407 8 0 chr2 11375566 11375684 -241880899 - MIR3 SINE MIR -7 201 83 410 287 19 93 chr2 11375882 11376098 -241880485 + MIR SINE MIR 49 248 -14 242 282 129 2 chr2 11376116 11376214 -241880369 - MIR SINE MIR -68 140 33 1554 131 0 14 chr2 11379184 11379405 -241877178 + AluSq SINE Alu 83 300 -13 2122 113 3 0 chr2 11379834 11380147 -241876436 + AluSx SINE Alu 1 314 0 682 230 78 10 chr2 11380239 11380443 -241876140 + MER20 DNA MER1_type 2 219 0 216 324 14 0 chr2 11380850 11380921 -241875662 - L2 LINE L2 -5 3267 3196 229 326 35 28 chr2 11381874 11382015 -241874568 - MIR SINE MIR -34 228 87 482 323 25 6 chr2 11382379 11382537 -241874046 + MIR SINE MIR 38 198 -64 792 272 38 0 chr2 11382556 11382769 -241873814 - MIR SINE MIR -24 238 18 2471 116 8 0 chr2 11382978 11383339 -241873244 - THE1B LTR MaLR 0 364 1 216 292 0 0 chr2 11383497 11383610 -241872973 + (TG)n Simple_repeat Simple_repeat 2 114 0 267 333 175 6 chr2 11384234 11384417 -241872166 + MIR SINE MIR 15 228 -34 213 284 168 0 chr2 11384475 11384570 -241872013 - L2 LINE L2 -256 3057 2947 332 258 54 0 chr2 11384797 11384890 -241871693 - MIR3 SINE MIR -7 201 104 213 320 41 67 chr2 11386616 11386658 -241869925 - MER5A DNA MER1_type 0 189 147 2340 99 3 0 chr2 11386658 11386951 -241869632 + AluSq SINE Alu 1 294 -19 213 320 41 67 chr2 11386951 11387102 -241869481 - MER5A DNA MER1_type -42 147 1 487 309 30 24 chr2 11387111 11387279 -241869304 - MER5B DNA MER1_type -2 176 8 208 238 0 0 chr2 11387615 11387657 -241868926 + (ATG)n Simple_repeat Simple_repeat 1 42 0 1005 36 0 0 chr2 11387795 11387905 -241868678 + 7SLRNA srpRNA srpRNA 91 200 -120 204 216 0 0 chr2 11388271 11388322 -241868261 + (TG)n Simple_repeat Simple_repeat 2 52 0 348 380 30 4 chr2 11388330 11388564 -241868019 + L3 LINE CR1 1336 1575 -2 212 301 124 9 chr2 11389121 11389234 -241867349 - L2 LINE L2 -1 3271 3146 267 252 50 101 chr2 11390326 11390485 -241866098 + MER5A DNA MER1_type 3 153 -36 432 0 0 0 chr2 11390627 11390675 -241865908 + (CA)n Simple_repeat Simple_repeat 2 49 0 252 356 11 0 chr2 11390734 11390824 -241865759 - MIR SINE MIR -122 140 50 2239 110 3 10 chr2 11390876 11391176 -241865407 + AluSx SINE Alu 1 298 -14 241 233 151 27 chr2 11391374 11391447 -241865136 + MIR3 SINE MIR 81 162 -46 494 289 263 25 chr2 11392066 11393102 -241863481 - L2 LINE L2 -15 3298 2013 488 307 151 9 chr2 11393340 11393659 -241862924 + L2 LINE L2 2854 3217 -96 419 305 175 7 chr2 11393789 11394081 -241862502 - L2 LINE L2 -1297 2017 1677 183 291 157 37 chr2 11394159 11394293 -241862290 - MIR SINE MIR -64 198 49 291 316 107 43 chr2 11394360 11394594 -241861989 + L1ME LINE L1 5341 5589 -532 222 37 0 0 chr2 11395109 11395136 -241861447 + (T)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr2 11395261 11395284 -241861299 + AT_rich Low_complexity Low_complexity 1 23 0 1888 115 70 4 chr2 11396425 11396695 -241859888 - AluJb SINE Alu -24 288 1 315 299 73 15 chr2 11396696 11396833 -241859750 - L2 LINE L2 0 3313 3169 1873 149 3 24 chr2 11396939 11397235 -241859348 - AluJo SINE Alu -21 291 2 2344 120 0 0 chr2 11397280 11397581 -241859002 - AluSx SINE Alu -11 301 1 2352 91 0 7 chr2 11397611 11397920 -241858663 - AluY SINE Alu -4 307 1 29 0 0 0 chr2 11397920 11397949 -241858634 + AT_rich Low_complexity Low_complexity 1 29 0 332 340 137 0 chr2 11397983 11398136 -241858447 - MIR SINE MIR -19 243 70 207 292 52 117 chr2 11398685 11398993 -241857590 + L2 LINE L2 2977 3264 -8 281 330 44 0 chr2 11401018 11401109 -241855474 - MIR SINE MIR -61 147 53 218 314 14 0 chr2 11401487 11401557 -241855026 + L2 LINE L2 3201 3271 -1 304 281 42 99 chr2 11401943 11402135 -241854448 - MIR3 SINE MIR -24 184 4 1349 111 0 0 chr2 11402256 11402436 -241854147 - AluY SINE Alu -2 309 130 2667 49 0 3 chr2 11402438 11402746 -241853837 - AluY SINE Alu -4 307 1 497 276 99 58 chr2 11404600 11404843 -241851740 - MIR SINE MIR -4 258 6 691 318 17 9 chr2 11405832 11406065 -241850518 - MIR SINE MIR -12 250 16 327 268 49 0 chr2 11406078 11406160 -241850423 - MIR SINE MIR -62 146 61 256 355 103 0 chr2 11406371 11406478 -241850105 + MER103 DNA DNA 2 119 -47 726 326 26 0 chr2 11406729 11406962 -241849621 - MIR SINE MIR -22 240 2 184 296 19 0 chr2 11407038 11407092 -241849491 + MIR SINE MIR 87 141 -67 660 286 162 0 chr2 11407163 11407373 -241849210 + MIR SINE MIR 17 260 -2 426 262 19 9 chr2 11407523 11407630 -241848953 - MIR3 SINE MIR -32 176 69 294 29 0 0 chr2 11408068 11408103 -241848480 + (T)n Simple_repeat Simple_repeat 1 35 0 2389 104 0 0 chr2 11408152 11408450 -241848133 - AluSg SINE Alu -12 298 1 2580 219 68 18 chr2 11408517 11408971 -241847612 - L1ME1 LINE L1 -134 6101 5602 1183 210 17 17 chr2 11408971 11409209 -241847374 + MER8 DNA MER2_type 2 239 0 2580 219 68 18 chr2 11409209 11409419 -241847164 - L1ME1 LINE L1 -633 5602 5404 693 241 14 0 chr2 11409411 11409663 -241846920 - L1ME1 LINE L1 -3712 2503 2240 * 2275 100 0 0 chr2 11409685 11410007 -241846576 - AluSc SINE Alu 0 322 1 1272 186 73 0 chr2 11410046 11410266 -241846317 - AluJo SINE Alu -48 264 29 366 222 0 0 chr2 11410271 11410352 -241846231 - L1ME1 LINE L1 -5250 1146 1066 304 231 0 0 chr2 11410482 11410534 -241846049 - L1MC4 LINE L1 -1339 6703 6652 409 228 53 32 chr2 11410539 11410682 -241845901 - L1MC4 LINE L1 -1339 6983 1932 355 171 26 13 chr2 11410740 11410816 -241845767 - MLT1K LTR MaLR -2 586 510 3565 228 70 16 chr2 11411175 11412163 -241844420 - L1ME1 LINE L1 -5321 1075 35 1689 122 0 17 chr2 11412228 11412498 -241844085 - AluSx SINE Alu 0 322 57 285 180 0 0 chr2 11413380 11413430 -241843153 - L2 LINE L2 -2 3311 3262 1679 174 28 0 chr2 11414298 11414580 -241842003 - AluJo SINE Alu -12 300 11 242 188 0 0 chr2 11414736 11414784 -241841799 + L2 LINE L2 3247 3294 -19 2391 94 0 0 chr2 11414897 11415195 -241841388 + AluSx SINE Alu 1 298 -14 204 322 66 13 chr2 11415676 11415828 -241840755 + MER91B DNA MER1_type 27 186 -4 446 317 0 25 chr2 11416335 11416496 -241840087 - MIR SINE MIR -3 259 103 405 306 0 41 chr2 11417082 11417111 -241839472 - MIR SINE MIR -72 190 161 2378 103 0 0 chr2 11417111 11417412 -241839171 - AluSx SINE Alu -11 301 1 405 306 0 41 chr2 11417412 11417529 -241839054 - MIR SINE MIR -101 161 50 180 0 0 0 chr2 11417536 11417556 -241839027 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2208 54 0 0 chr2 11417558 11417817 -241838766 - AluY SINE Alu -21 290 32 220 171 0 0 chr2 11418938 11418979 -241837604 + MIR SINE MIR 107 147 -115 494 330 63 33 chr2 11422540 11422857 -241833726 - L1MC/D LINE L1 -743 5403 5188 2375 82 0 0 chr2 11422956 11423249 -241833334 - AluSc SINE Alu -4 305 13 216 268 122 0 chr2 11424993 11425075 -241831508 + MIR SINE MIR 124 215 -47 2056 145 0 0 chr2 11425078 11425367 -241831216 - AluSx SINE Alu -23 289 1 6145 154 50 18 chr2 11426056 11426595 -241829988 + Tigger3b DNA MER2_type 2 523 -2505 2215 109 6 40 chr2 11426595 11426916 -241829667 + AluSx SINE Alu 1 310 -2 6145 154 50 18 chr2 11426916 11427325 -241829258 + Tigger3b DNA MER2_type 523 918 -2110 2479 92 0 0 chr2 11427325 11427631 -241828952 - AluSq SINE Alu -7 306 1 6145 154 50 18 chr2 11427631 11427702 -241828881 + Tigger3b DNA MER2_type 918 985 -2043 1363 89 84 5 chr2 11427702 11427915 -241828668 - MER30 DNA MER1_type 0 230 1 6145 154 50 18 chr2 11427915 11428086 -241828497 + Tigger3b DNA MER2_type 985 1231 0 1999 122 47 36 chr2 11428779 11429139 -241827444 - THE1B LTR MaLR 0 364 1 2367 119 0 0 chr2 11429292 11429602 -241826981 + AluSx SINE Alu 1 310 -2 188 318 0 0 chr2 11430371 11430415 -241826168 - L2 LINE L2 -8 3305 3262 256 220 0 17 chr2 11430565 11430624 -241825959 - L2 LINE L2 -19 3294 3237 311 227 15 0 chr2 11432389 11432455 -241824128 + MIR SINE MIR 110 176 -86 426 326 63 27 chr2 11433232 11433453 -241823130 + MIR SINE MIR 24 252 -10 524 281 12 24 chr2 11433509 11433676 -241822907 - L1MC5 LINE L1 -68 7893 7729 1261 247 162 5 chr2 11434463 11434876 -241821707 - MLT1H LTR MaLR -71 478 1 2285 119 3 0 chr2 11435314 11435624 -241820959 - AluSx SINE Alu -1 311 1 2559 62 0 7 chr2 11436267 11436575 -241820008 + AluY SINE Alu 1 306 -5 376 297 108 18 chr2 11436616 11436838 -241819745 - L1ME3A LINE L1 -18 6152 5911 247 306 171 9 chr2 11436840 11436951 -241819632 + MIR SINE MIR 114 242 -20 294 306 33 33 chr2 11437761 11437882 -241818701 + MIR SINE MIR 20 140 -122 422 256 0 0 chr2 11439700 11439786 -241816797 + G-rich Low_complexity Low_complexity 89 174 0 618 245 0 0 chr2 11439786 11440089 -241816494 + (CAGAGA)n Simple_repeat Simple_repeat 1 303 0 505 246 62 25 chr2 11490892 11491097 -241765486 - MIR SINE MIR -1 261 44 6730 92 16 16 chr2 11491668 11492752 -241763831 + SVA Other Other 433 1360 -26 661 11 0 23 chr2 11492752 11492840 -241763743 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 236 315 56 19 chr2 11492840 11492948 -241763635 + MIR3 SINE MIR 74 185 -23 197 278 130 9 chr2 11493044 11493152 -241763431 - MIR3 SINE MIR -31 177 57 3111 160 25 27 chr2 11493475 11494076 -241762507 + L1MB2 LINE L1 5444 6043 -128 472 111 0 0 chr2 11494076 11494145 -241762438 + L1MB3 LINE L1 6107 6178 -5 309 240 106 84 chr2 11494355 11494430 -241762153 + L1ME4a LINE L1 5835 5907 -214 2471 77 3 3 chr2 11494430 11494740 -241761843 - AluY SINE Alu -1 310 1 309 240 106 84 chr2 11494740 11494843 -241761740 + L1ME4a LINE L1 5907 6017 -104 217 292 45 11 chr2 11495044 11495133 -241761450 + L3 LINE CR1 1483 1574 -3 580 255 71 38 chr2 11495512 11495696 -241760887 + MIR SINE MIR 1 190 -72 2369 202 56 54 chr2 11497470 11498132 -241758451 - MER21B LTR ERV1 -58 805 143 357 149 9 167 chr2 11498270 11498384 -241758199 - MER21B LTR ERV1 -767 96 1 238 307 104 50 chr2 11498571 11498773 -241757810 - L2 LINE L2 -1047 2267 2055 180 0 0 0 chr2 11499557 11499577 -241757006 + (GTGTG)n Simple_repeat Simple_repeat 1 20 0 306 295 132 39 chr2 11499717 11500189 -241756394 - L1MC/D LINE L1 -302 5819 5317 2866 0 0 0 chr2 11500212 11500509 -241756074 - AluYa5 SINE Alu -14 297 1 203 333 0 27 chr2 11502547 11502622 -241753961 - MIR SINE MIR -120 88 16 2546 43 33 7 chr2 11502744 11503044 -241753539 - AluY SINE Alu -3 308 1 2304 103 0 0 chr2 11503498 11503798 -241752785 - AluY SINE Alu -11 300 1 1834 112 38 45 chr2 11504154 11504468 -241752115 - AluSx SINE Alu 0 312 1 25 0 0 0 chr2 11505106 11505131 -241751452 + GC_rich Low_complexity Low_complexity 1 25 0 217 73 24 24 chr2 11505263 11505304 -241751279 + (CGGGGG)n Simple_repeat Simple_repeat 1 41 0 616 313 66 28 chr2 11505926 11506142 -241750441 - L2 LINE L2 -235 3037 2831 1745 165 0 3 chr2 11506142 11506433 -241750150 - AluJo SINE Alu -22 290 1 616 313 66 28 chr2 11506433 11506679 -241749904 - L2 LINE L2 -441 2831 2480 267 279 13 13 chr2 11508675 11508754 -241747829 - L2 LINE L2 -44 3228 3150 218 209 224 0 chr2 11509474 11509541 -241747042 - MIR3 SINE MIR -21 187 106 848 144 14 7 chr2 11509541 11509680 -241746903 - MER7A DNA MER2_type -208 138 1 252 250 201 61 chr2 11509708 11509872 -241746711 + MIR SINE MIR 15 201 -61 289 61 0 0 chr2 11509966 11510004 -241746579 + AluJ/FLAM SINE Alu 67 100 -202 526 105 35 35 chr2 11510004 11510019 -241746564 - AluJb SINE Alu -165 147 133 1493 86 5 0 chr2 11510019 11510246 -241746337 - AluY SINE Alu 0 311 84 526 105 35 35 chr2 11510246 11510315 -241746268 - AluJb SINE Alu -178 134 62 1688 158 0 11 chr2 11511109 11511432 -241745151 - AluSx SINE Alu 0 348 29 2948 176 4 23 chr2 11511448 11511965 -241744618 + MLT2B2 LTR ERVL 1 507 -8 1506 234 20 8 chr2 11512009 11512406 -241744177 - L1MEc LINE L1 -5455 941 540 526 203 155 35 chr2 11512412 11512644 -241743939 - MLT1F1 LTR MaLR -13 554 295 2232 83 0 0 chr2 11513666 11513956 -241742627 + AluY SINE Alu 1 290 -21 202 214 14 57 chr2 11514651 11514721 -241741862 + GA-rich Low_complexity Low_complexity 1 67 0 2308 74 3 0 chr2 11515271 11515581 -241741002 + AluYa5 SINE Alu 1 311 0 238 312 43 36 chr2 11516480 11516618 -241739965 + L2 LINE L2 2684 2822 -492 2678 209 149 66 chr2 11516982 11518118 -241738465 - L1MC4a LINE L1 -155 7653 6424 322 182 0 30 chr2 11518118 11518184 -241738399 - MER2 DNA MER2_type 0 345 282 * 341 203 13 38 chr2 11518157 11518236 -241738347 - MER8 DNA MER2_type -60 179 103 594 272 48 37 chr2 11518257 11518525 -241738058 - L1MC3 LINE L1 -1454 6331 6061 778 217 81 72 chr2 11518534 11518688 -241737895 - L1MCc LINE L1 -4034 3088 2937 1525 165 36 11 chr2 11518688 11518967 -241737616 - AluJb SINE Alu -26 286 1 778 217 81 72 chr2 11518967 11519158 -241737425 - L1MCc LINE L1 -4185 2937 2740 * 1643 93 4 0 chr2 11519145 11519381 -241737202 - L1P LINE L1 -846 5300 5064 1845 53 4 29 chr2 11519381 11519625 -241736958 + L1PA8 LINE L1 5934 6171 -1 321 320 92 7 chr2 11519627 11519780 -241736803 - L1MCc LINE L1 -4366 2756 2591 906 254 5 20 chr2 11519782 11519983 -241736600 + MER58A DNA MER1_type 3 200 -24 311 180 26 203 chr2 11519987 11520298 -241736285 - L1MCc LINE L1 -4870 2102 1826 1347 226 80 75 chr2 11520336 11521333 -241735250 - L1MCc LINE L1 -4914 1509 821 6795 63 10 27 chr2 11521368 11522410 -241734173 - L1PA8 LINE L1 -16 6156 5111 814 244 29 29 chr2 11522418 11522664 -241733919 - Charlie4 DNA MER1_type -1698 263 18 344 223 54 95 chr2 11522762 11522910 -241733673 + MIR SINE MIR 110 251 -11 276 30 0 0 chr2 11523171 11523204 -241733379 + (TC)n Simple_repeat Simple_repeat 2 34 0 216 67 0 0 chr2 11523203 11523233 -241733350 + (TG)n Simple_repeat Simple_repeat 1 30 0 * 1987 123 14 0 chr2 11523791 11524083 -241732500 - AluSx SINE Alu -16 296 1 384 312 9 9 chr2 11524219 11524328 -241732255 - MIR SINE MIR -81 127 19 2440 186 53 28 chr2 11524660 11525202 -241731381 - MER67C LTR ERV1 -153 557 2 2349 86 0 0 chr2 11525301 11525602 -241730981 + AluSx SINE Alu 1 301 -11 1638 186 46 25 chr2 11526519 11526885 -241729698 - MLT1A2 LTR MaLR 0 374 1 7438 45 3 1 chr2 11527373 11528687 -241727896 + L1PA7 LINE L1 4838 6154 0 1072 233 137 22 chr2 11528774 11529220 -241727363 + L1MEc LINE L1 36 532 -5864 492 264 66 47 chr2 11529247 11529505 -241727078 + MLT1F1 LTR MaLR 16 278 -289 234 0 0 0 chr2 11529629 11529655 -241726928 + (TA)n Simple_repeat Simple_repeat 1 26 0 204 250 100 25 chr2 11529703 11529726 -241726857 + L2 LINE L2 3129 3149 -164 1529 170 22 7 chr2 11529726 11529997 -241726586 - AluJb SINE Alu -37 275 1 204 250 100 25 chr2 11529997 11530093 -241726490 + L2 LINE L2 3149 3257 -56 1162 228 127 38 chr2 11531442 11531895 -241724688 - MLT1G1 LTR MaLR -5 588 76 3118 182 102 5 chr2 11531895 11532311 -241724272 - MER72 LTR ERV1 0 722 217 278 0 54 0 chr2 11532311 11532348 -241724235 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3118 182 102 5 chr2 11532348 11532585 -241723998 - MER72 LTR ERV1 -505 217 5 1162 228 127 38 chr2 11532585 11532669 -241723914 - MLT1G1 LTR MaLR -517 76 1 335 326 65 0 chr2 11532849 11532987 -241723596 + MIR3 SINE MIR 33 179 -29 420 110 0 132 chr2 11532989 11533080 -241723503 + MADE1 DNA Mariner 1 79 -1 3795 175 43 59 chr2 11533776 11534205 -241722378 - L1MB8 LINE L1 -2 6176 5742 2431 68 0 0 chr2 11534205 11534515 -241722068 + AluY SINE Alu 1 310 -1 3795 175 43 59 chr2 11534515 11534947 -241721636 - L1MB8 LINE L1 -436 5742 5348 204 40 0 0 chr2 11534947 11534972 -241721611 + (TG)n Simple_repeat Simple_repeat 2 26 0 3795 175 43 59 chr2 11534972 11535281 -241721302 - L1MB8 LINE L1 -830 5348 5036 3418 119 50 4 chr2 11537342 11537845 -241718738 - MER1A DNA MER1_type 0 527 2 535 209 43 35 chr2 11539908 11540111 -241716472 + MER106A DNA MER1_type 3 236 0 1368 189 9 39 chr2 11540439 11540772 -241715811 - MER33 DNA MER1_type -1 323 1 319 173 34 45 chr2 11541380 11541559 -241715024 + (TA)n Simple_repeat Simple_repeat 1 177 0 807 265 62 0 chr2 11543067 11543278 -241713305 + MER58A DNA MER1_type 1 224 0 2207 100 0 0 chr2 11545432 11545731 -241710852 - AluSx SINE Alu -13 299 1 525 277 110 7 chr2 11546166 11546385 -241710198 + MIR SINE MIR 16 252 -10 216 97 0 0 chr2 11546663 11546694 -241709889 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 667 203 65 55 chr2 11547176 11547393 -241709190 - L1ME3A LINE L1 -10 6160 5942 368 186 14 0 chr2 11547394 11547464 -241709119 - L1ME3A LINE L1 -312 5858 5788 227 296 41 51 chr2 11548226 11548324 -241708259 - MIR3 SINE MIR -9 199 103 2216 96 3 0 chr2 11549004 11549306 -241707277 + AluSx SINE Alu 1 303 -9 370 308 107 0 chr2 11551565 11551734 -241704849 - MIR SINE MIR -52 210 24 653 132 25 0 chr2 11552022 11552143 -241704440 + L1MB4 LINE L1 6057 6180 0 2175 82 13 0 chr2 11552213 11552516 -241704067 + AluY SINE Alu 1 307 -4 620 253 3 0 chr2 11553814 11554147 -241702436 + (TG)n Simple_repeat Simple_repeat 1 334 0 320 269 113 38 chr2 11554135 11554295 -241702288 - L1MEd LINE L1 -5402 717 546 * 251 283 170 0 chr2 11554753 11554859 -241701724 - MLT1L LTR MaLR -7 608 485 485 243 94 28 chr2 11554972 11555153 -241701430 - MLT1L LTR MaLR -384 231 39 352 283 71 15 chr2 11555278 11555476 -241701107 - L1M4 LINE L1 -1310 4836 4628 256 172 35 0 chr2 11556941 11556999 -241699584 + MIR SINE MIR 89 148 -114 291 157 0 0 chr2 11557375 11557426 -241699157 + T-rich Low_complexity Low_complexity 1 51 0 562 339 25 29 chr2 11558216 11558493 -241698090 + HERVL LTR ERVL 4739 5014 -640 2226 122 23 0 chr2 11558493 11558796 -241697787 + AluSx SINE Alu 1 310 -2 920 223 110 43 chr2 11559340 11559685 -241696898 + LTR16A1 LTR ERVL 90 457 0 1572 199 41 33 chr2 11560133 11560355 -241696228 - MLT1A1 LTR MaLR 0 365 137 1927 141 44 44 chr2 11560355 11560718 -241695865 + THE1B LTR MaLR 1 363 -1 1572 199 41 33 chr2 11560718 11560857 -241695726 - MLT1A1 LTR MaLR -228 137 1 395 271 132 0 chr2 11561064 11561208 -241695375 - MIR SINE MIR -11 251 89 1004 215 121 69 chr2 11561255 11561660 -241694923 - MLT1H LTR MaLR 0 549 124 878 244 104 92 chr2 11561799 11562552 -241694031 - L1ME4a LINE L1 -23 6098 5337 312 271 59 17 chr2 11563458 11563576 -241693007 + MIR SINE MIR 11 133 -129 557 238 116 45 chr2 11564212 11564565 -241692018 + MLT1I LTR MaLR 3 407 -2 2044 119 3 48 chr2 11564660 11564970 -241691613 - AluSq SINE Alu -17 296 1 417 330 36 26 chr2 11565151 11565345 -241691238 - MIR SINE MIR -21 241 46 1633 143 87 3 chr2 11565441 11565727 -241690856 + AluJo SINE Alu 1 310 -2 204 329 106 58 chr2 11565728 11565935 -241690648 + L2 LINE L2 3036 3252 -20 926 235 21 21 chr2 11565999 11566242 -241690341 + MIR SINE MIR 1 243 -19 253 268 175 0 chr2 11566386 11566483 -241690100 + MIR3 SINE MIR 2 115 -93 335 158 20 48 chr2 11568311 11568457 -241688126 + C-rich Low_complexity Low_complexity 3 144 0 614 305 88 44 chr2 11568534 11569033 -241687550 + LTR33 LTR ERVL 1 521 0 225 325 13 0 chr2 11569145 11569222 -241687361 - L3 LINE CR1 -440 1137 1060 1965 204 71 14 chr2 11569222 11569731 -241686852 - MER67A LTR ERV1 0 543 6 268 328 25 17 chr2 11570087 11570206 -241686377 + CT-rich Low_complexity Low_complexity 5 124 0 327 288 27 18 chr2 11571627 11571738 -241684845 + MIR SINE MIR 36 147 -61 196 317 0 0 chr2 11571914 11571974 -241684609 - MIR3 SINE MIR -5 203 144 183 286 43 29 chr2 11572044 11572114 -241684469 + MIR SINE MIR 72 142 -66 2054 136 3 3 chr2 11572284 11572601 -241683982 - AluSg SINE Alu 0 310 3 198 295 267 23 chr2 11572624 11572841 -241683742 - L3 LINE CR1 -222 1355 1086 1975 69 8 2 chr2 11572862 11573127 -241683456 - L1MC/D LINE L1 -598 5556 5320 180 333 0 0 chr2 11573568 11573616 -241682967 + MIR SINE MIR 84 131 -77 2137 118 0 20 chr2 11573624 11573930 -241682653 - AluY SINE Alu -11 300 1 491 237 129 46 chr2 11574291 11574485 -241682098 - MIR SINE MIR -1 261 52 44678 43 5 2 chr2 11574657 11580798 -241675785 - L1PA4 LINE L1 0 6155 1 2222 127 3 0 chr2 11580801 11581109 -241675474 - AluSc SINE Alu 0 309 1 297 0 0 0 chr2 11581418 11581451 -241675132 + (TG)n Simple_repeat Simple_repeat 2 34 0 37 62 0 0 chr2 11581584 11581649 -241674934 + AT_rich Low_complexity Low_complexity 1 65 0 294 314 81 33 chr2 11582349 11582559 -241674024 + HAL1b LINE L1 310 529 -819 189 315 16 55 chr2 11583165 11583292 -241673291 + MIR SINE MIR 138 259 -3 269 309 34 40 chr2 11583862 11584011 -241672572 + MIR SINE MIR 38 185 -77 365 298 54 30 chr2 11584324 11584553 -241672030 + MIR SINE MIR 27 262 0 512 195 44 18 chr2 11585237 11585350 -241671233 - MER45A DNA AcHobo -4 174 59 185 236 146 24 chr2 11585394 11585517 -241671066 + L2 LINE L2 2953 3090 -182 368 253 0 21 chr2 11585775 11585870 -241670713 - L2 LINE L2 -181 3091 2999 237 314 82 102 chr2 11586065 11586241 -241670342 - L2 LINE L2 -557 2757 2579 1828 142 7 37 chr2 11586241 11586536 -241670047 + AluJb SINE Alu 3 288 -24 237 314 82 102 chr2 11586536 11586917 -241669666 - L2 LINE L2 -735 2579 2211 25 0 0 0 chr2 11586996 11587021 -241669562 + AT_rich Low_complexity Low_complexity 1 25 0 2031 183 96 26 chr2 11587182 11587519 -241669064 - MLT1D LTR MaLR -2 503 124 2485 83 39 30 chr2 11587519 11587880 -241668703 + THE1B LTR MaLR 1 364 0 2031 183 96 26 chr2 11587880 11588000 -241668583 - MLT1D LTR MaLR -381 124 14 1866 177 93 75 chr2 11588458 11588794 -241667789 + MLT2B1 LTR ERVL 1 350 -170 2306 113 3 3 chr2 11588794 11589104 -241667479 - AluSq SINE Alu -3 310 1 1866 177 93 75 chr2 11589104 11589270 -241667313 + MLT2B1 LTR ERVL 350 512 -8 206 262 26 37 chr2 11589414 11589535 -241667048 - MER5A DNA MER1_type -59 119 5 2048 125 0 0 chr2 11590378 11590709 -241665874 + AluSx SINE Alu 1 331 0 221 356 23 0 chr2 11590859 11590946 -241665637 - MIR SINE MIR -116 146 58 434 248 50 28 chr2 11591070 11591211 -241665372 - MIR SINE MIR -70 192 49 1885 106 99 7 chr2 11592057 11592330 -241664253 + AluSx SINE Alu 5 302 -10 205 222 28 69 chr2 11592384 11592456 -241664127 - MIR SINE MIR -106 102 34 181 370 11 11 chr2 11592901 11592993 -241663590 - MIR SINE MIR -96 112 21 1876 156 7 0 chr2 11593719 11594008 -241662575 - AluSx SINE Alu -19 293 3 313 336 209 16 chr2 11594146 11594973 -241661610 + L2 LINE L2 1977 2963 -351 218 330 54 43 chr2 11595074 11595259 -241661324 + L2 LINE L2 3117 3303 -10 361 310 138 0 chr2 11596062 11596236 -241660347 - MIR SINE MIR -24 238 41 200 236 73 0 chr2 11596908 11596963 -241659620 + MIR SINE MIR 52 110 -152 220 277 0 0 chr2 11597097 11597174 -241659409 + (ATG)n Simple_repeat Simple_repeat 1 77 0 214 330 0 11 chr2 11598194 11598285 -241658298 + MIR SINE MIR 29 118 -144 288 203 116 0 chr2 11598560 11598629 -241657954 + MIR SINE MIR 83 159 -103 2850 91 15 13 chr2 11598814 11599210 -241657373 + THE1C-int LTR MaLR 1184 1580 0 1081 155 40 44 chr2 11599210 11599462 -241657121 + THE1C LTR MaLR 1 251 -124 1607 118 47 40 chr2 11599566 11599888 -241656695 + THE1C LTR MaLR 52 375 0 280 151 163 35 chr2 11601205 11601291 -241655292 - MIR3 SINE MIR -3 205 109 203 319 14 14 chr2 11601406 11601475 -241655108 - MIR SINE MIR -59 149 81 1357 152 9 0 chr2 11602037 11602248 -241654335 - AluSg/x SINE Alu -15 295 83 993 208 26 9 chr2 11602409 11602635 -241653948 - L1MA4 LINE L1 -781 5365 5136 * 5927 120 10 24 chr2 11602633 11603555 -241653028 + L1MA4 LINE L1 5392 6300 0 207 355 50 8 chr2 11607358 11607479 -241649104 - MIR SINE MIR -58 204 79 260 358 83 0 chr2 11607920 11608040 -241648543 - L2 LINE L2 0 3272 3143 755 141 0 41 chr2 11608099 11608220 -241648363 + FLAM_A SINE Alu 13 128 -14 709 282 8 103 chr2 11608573 11608942 -241647641 - L1MC4a LINE L1 -1978 5830 5497 23 0 0 0 chr2 11609143 11609166 -241647417 + AT_rich Low_complexity Low_complexity 1 23 0 2156 119 10 0 chr2 11610229 11610524 -241646059 + AluSx SINE Alu 1 298 -14 2381 85 3 0 chr2 11611060 11611353 -241645230 - AluSq SINE Alu -19 294 1 447 275 48 53 chr2 11611461 11611650 -241644933 + MIR3 SINE MIR 14 201 -7 187 238 191 48 chr2 11611734 11611818 -241644765 - L2 LINE L2 -38 3275 3180 265 280 97 0 chr2 11612280 11612373 -241644210 + MER20 DNA MER1_type 38 139 -80 2501 80 0 0 chr2 11613342 11613644 -241642939 + AluSc SINE Alu 1 302 -7 1103 275 91 63 chr2 11613839 11614908 -241641675 - L2 LINE L2 0 3313 2209 447 161 18 18 chr2 11614908 11615020 -241641563 - Charlie5 DNA MER1_type -116 2496 2385 301 229 12 0 chr2 11615163 11615246 -241641337 - Charlie5 DNA MER1_type -175 2437 2354 2354 105 3 0 chr2 11615270 11615576 -241641007 + AluSx SINE Alu 1 307 -5 859 336 34 26 chr2 11615626 11616120 -241640463 - L2 LINE L2 -1084 2230 1733 254 290 94 43 chr2 11617629 11617974 -241638609 - L2 LINE L2 -227 3086 2718 370 314 179 40 chr2 11618003 11618015 -241638568 - L2 LINE L2 -775 2539 2530 1718 139 45 35 chr2 11618015 11618303 -241638280 + AluJo SINE Alu 1 291 -21 370 314 179 40 chr2 11618303 11618513 -241638070 - L2 LINE L2 -784 2530 2286 235 331 41 0 chr2 11618536 11618657 -241637926 - L2 LINE L2 -1459 1855 1730 248 263 25 0 chr2 11618774 11618854 -241637729 - L1MC4 LINE L1 0 8042 7961 767 334 168 18 chr2 11618869 11619863 -241636720 - L2 LINE L2 -1612 1702 560 389 279 155 23 chr2 11620065 11620213 -241636370 + MIR SINE MIR 14 202 -60 2684 135 31 2 chr2 11620213 11620627 -241635956 - MSTB LTR MaLR 0 426 1 389 279 155 23 chr2 11620627 11620697 -241635886 + MIR SINE MIR 202 261 -1 2384 144 0 6 chr2 11620904 11621243 -241635340 - MER1B DNA MER1_type 0 337 1 1359 192 39 88 chr2 11621667 11621940 -241634643 + MLT1B LTR MaLR 4 252 -138 2115 119 68 34 chr2 11621940 11622003 -241634580 - THE1B LTR MaLR 0 364 305 1918 121 13 64 chr2 11622003 11622317 -241634266 + AluSx SINE Alu 1 298 -14 2115 119 68 34 chr2 11622317 11622605 -241633978 - THE1B LTR MaLR -59 305 1 1359 192 39 88 chr2 11622605 11622738 -241633845 + MLT1B LTR MaLR 252 390 0 229 260 0 41 chr2 11622840 11622913 -241633670 + L2 LINE L2 3015 3084 -188 530 236 39 48 chr2 11623091 11623299 -241633284 + L2 LINE L2 3108 3313 0 379 218 123 70 chr2 11623979 11624194 -241632389 + MIR SINE MIR 14 255 -7 183 329 93 14 chr2 11624857 11624997 -241631586 - L2 LINE L2 -177 3095 2945 297 0 0 0 chr2 11625164 11625197 -241631386 + (TG)n Simple_repeat Simple_repeat 2 34 0 291 194 32 0 chr2 11625821 11625883 -241630700 + MIR SINE MIR 89 152 -110 294 143 0 0 chr2 11626253 11626302 -241630281 + (T)n Simple_repeat Simple_repeat 1 49 0 562 320 33 29 chr2 11627090 11627365 -241629218 + HERVL LTR ERVL 4739 5014 -640 759 109 10 0 chr2 11627365 11627466 -241629117 + AluS SINE Alu 1 102 -210 297 259 50 114 chr2 11627566 11627617 -241628966 - L2 LINE L2 -1550 1764 1711 543 31 0 0 chr2 11627617 11627682 -241628901 + (TG)n Simple_repeat Simple_repeat 1 65 0 297 259 50 114 chr2 11627682 11627850 -241628733 - L2 LINE L2 -1603 1711 1559 257 239 103 51 chr2 11627911 11628028 -241628555 + MIR SINE MIR 92 214 -48 228 272 20 82 chr2 11628664 11628811 -241627772 + L2 LINE L2 2910 3047 -225 3382 54 0 5 chr2 11629878 11630307 -241626276 - L1PA8 LINE L1 0 6172 5746 1269 267 125 71 chr2 11630547 11630778 -241625805 - L1M4 LINE L1 -1014 5132 4915 2417 70 6 16 chr2 11630778 11631091 -241625492 + AluY SINE Alu 1 310 -1 1269 267 125 71 chr2 11631091 11632166 -241624417 - L1M4 LINE L1 -1231 4915 3737 285 29 0 0 chr2 11632166 11632200 -241624383 + (CA)n Simple_repeat Simple_repeat 2 35 0 1269 267 125 71 chr2 11632200 11632346 -241624237 - L1M4 LINE L1 -2409 3737 3600 276 262 12 24 chr2 11633285 11633369 -241623214 - MIR3 SINE MIR -16 192 110 801 71 10 0 chr2 11634366 11634464 -241622119 + AluS SINE Alu 1 99 -214 2370 92 0 0 chr2 11634702 11634995 -241621588 + AluSx SINE Alu 1 293 -19 1714 110 138 37 chr2 11635545 11635616 -241620967 - THE1B LTR MaLR -5 359 297 2148 114 3 62 chr2 11635616 11635941 -241620642 + AluSx SINE Alu 1 306 -6 1714 110 138 37 chr2 11635941 11636195 -241620388 - THE1B LTR MaLR -67 297 1 181 284 42 42 chr2 11636253 11636348 -241620235 + L3 LINE CR1 1478 1572 -5 199 273 195 47 chr2 11637319 11637447 -241619136 - MIR3 SINE MIR -49 159 13 582 296 94 22 chr2 11637477 11637700 -241618883 - MIR SINE MIR -18 244 6 21 0 0 0 chr2 11639884 11639905 -241616678 + AT_rich Low_complexity Low_complexity 1 21 0 661 99 0 0 chr2 11639914 11640005 -241616578 + AluSg/x SINE Alu 216 306 -6 2340 95 0 13 chr2 11642011 11642316 -241614267 + AluSq SINE Alu 1 301 -12 1068 144 11 29 chr2 11642424 11642598 -241613985 - FRAM SINE Alu -14 162 1 706 212 88 6 chr2 11643148 11643318 -241613265 + MER5A DNA MER1_type 3 186 -3 195 146 0 0 chr2 11643640 11643681 -241612902 + (TG)n Simple_repeat Simple_repeat 1 41 0 23 33 0 0 chr2 11644511 11644541 -241612042 + AT_rich Low_complexity Low_complexity 1 30 0 1943 120 62 17 chr2 11644621 11644912 -241611671 + AluSx SINE Alu 1 304 -8 266 349 92 13 chr2 11646079 11646231 -241610352 - Tigger8 DNA MER2_type -502 164 1 2214 121 0 22 chr2 11646431 11646746 -241609837 - AluSg SINE Alu -2 308 1 293 323 86 0 chr2 11646941 11647034 -241609549 - MIR SINE MIR -105 157 57 309 313 15 41 chr2 11647876 11648060 -241608523 + MLT1I LTR MaLR 64 248 -202 296 221 128 0 chr2 11648053 11648139 -241608444 + MLT1J2 LTR MaLR 285 381 -69 * 389 296 129 34 chr2 11648218 11648451 -241608132 - L2 LINE L2 -68 3245 2991 750 306 34 0 chr2 11648519 11648784 -241607799 - L2 LINE L2 -904 2410 2137 219 329 0 13 chr2 11649247 11649323 -241607260 + CT-rich Low_complexity Low_complexity 2 76 0 397 289 56 38 chr2 11649353 11649619 -241606964 - HAL1 LINE L1 -2 2505 2235 514 331 115 41 chr2 11649636 11649974 -241606609 - HAL1 LINE L1 -395 2112 1750 293 270 106 42 chr2 11649980 11650217 -241606366 - HAL1 LINE L1 -1453 1054 803 182 194 15 0 chr2 11650273 11650340 -241606243 + (TG)n Simple_repeat Simple_repeat 2 69 0 910 285 64 26 chr2 11650623 11650845 -241605738 + L2 LINE L2 1565 1777 -1537 1708 205 36 0 chr2 11650845 11651176 -241605407 - MER2 DNA MER2_type -1 343 1 910 285 64 26 chr2 11651176 11651374 -241605209 + L2 LINE L2 1777 2001 -1313 242 183 0 61 chr2 11652487 11652569 -241604014 - L1MA8 LINE L1 -4 6287 6211 574 163 34 88 chr2 11652572 11652614 -241603969 + L1MA7 LINE L1 6095 6138 -153 1926 147 0 11 chr2 11652614 11652921 -241603662 - AluSx SINE Alu 0 304 1 574 163 34 88 chr2 11652921 11653023 -241603560 + L1MA7 LINE L1 6138 6233 -58 384 239 0 83 chr2 11653306 11653415 -241603168 + MER5B DNA MER1_type 1 100 -78 187 143 0 0 chr2 11654273 11654301 -241602282 - L2 LINE L2 -2924 390 363 1922 183 19 19 chr2 11655271 11655638 -241600945 - MLT2D LTR ERVL -45 369 3 432 0 0 0 chr2 11655742 11655790 -241600793 + (TG)n Simple_repeat Simple_repeat 1 48 0 1276 164 72 23 chr2 11656479 11656783 -241599800 - LTR37A LTR ERV1 -21 405 87 1625 124 62 4 chr2 11656885 11657142 -241599441 + Tigger3(Golem) DNA MER2_type 2757 3028 -1 1237 103 6 0 chr2 11657205 11657380 -241599203 - AluY SINE Alu -17 294 119 225 140 70 0 chr2 11657502 11657559 -241599024 + T-rich Low_complexity Low_complexity 4 64 0 10199 30 7 0 chr2 11657572 11659540 -241597043 - L1PA5 LINE L1 -11 6143 4169 563 15 0 0 chr2 11659540 11659606 -241596977 + L1PA5 LINE L1 4119 4184 -1962 1002 83 0 0 chr2 11659609 11659741 -241596842 - AluY SINE Alu -179 132 1 223 208 132 0 chr2 11659807 11659860 -241596723 - L2 LINE L2 0 3272 3213 704 228 204 0 chr2 11660024 11660235 -241596348 + MIR SINE MIR 9 262 0 1823 135 10 3 chr2 11660239 11660527 -241596056 - AluSx SINE Alu -22 290 1 2513 137 3 3 chr2 11661233 11661597 -241594986 - THE1B LTR MaLR 0 364 1 210 310 56 0 chr2 11661763 11661834 -241594749 - MIR SINE MIR -14 248 174 599 231 6 58 chr2 11662960 11663116 -241593467 + MER5A DNA MER1_type 42 189 0 210 105 0 0 chr2 11665668 11665706 -241590877 + (T)n Simple_repeat Simple_repeat 1 38 0 192 77 0 0 chr2 11666817 11666843 -241589740 + (A)n Simple_repeat Simple_repeat 1 26 0 328 286 56 40 chr2 11667230 11667356 -241589227 + MIR SINE MIR 96 223 -39 886 234 114 45 chr2 11668485 11668600 -241587983 + MLT1J2 LTR MaLR 37 143 -266 1020 287 56 47 chr2 11668600 11669043 -241587540 - LTR16A LTR ERVL -3 447 1 886 234 114 45 chr2 11669043 11669268 -241587315 + MLT1J2 LTR MaLR 143 364 -45 1218 180 4 8 chr2 11669285 11669529 -241587054 - AluSx SINE Alu -9 303 61 206 295 0 13 chr2 11670799 11670877 -241585706 + T-rich Low_complexity Low_complexity 5 81 0 396 52 0 17 chr2 11671413 11671471 -241585112 + Alu SINE Alu 244 300 -1 198 320 51 13 chr2 11671479 11671557 -241585026 - MIR SINE MIR -132 130 50 1971 46 0 0 chr2 11671968 11672205 -241584378 + L1P2 LINE L1 5320 5556 -598 194 312 110 28 chr2 11672254 11672363 -241584220 + L3 LINE CR1 1086 1203 -374 878 236 20 24 chr2 11672507 11672804 -241583779 + AluSg SINE Alu 3 298 -2 621 216 70 49 chr2 11673503 11673688 -241582895 + MER53 DNA DNA 1 189 0 1660 147 58 17 chr2 11674914 11675206 -241581377 - AluSx SINE Alu -8 304 1 195 146 0 0 chr2 11676145 11676186 -241580397 + (CA)n Simple_repeat Simple_repeat 1 41 0 467 206 52 44 chr2 11676505 11676641 -241579942 - MER5A DNA MER1_type -3 186 50 449 309 43 0 chr2 11677098 11677237 -241579346 + MIR3 SINE MIR 40 184 -24 221 322 41 50 chr2 11677351 11677472 -241579111 + L2 LINE L2 2948 3067 -205 1987 166 108 30 chr2 11677483 11677577 -241579006 - MLT1C LTR MaLR 0 467 382 4106 80 16 4 chr2 11677577 11678124 -241578459 + MER41A LTR ERV1 1 554 0 1987 166 108 30 chr2 11678124 11678462 -241578121 - MLT1C LTR MaLR -85 382 1 343 270 122 0 chr2 11679445 11679560 -241577023 - MIR SINE MIR -17 245 117 21 36 0 0 chr2 11679849 11679877 -241576706 + AT_rich Low_complexity Low_complexity 1 28 0 1253 132 0 0 chr2 11680646 11680828 -241575755 + AluSx SINE Alu 1 182 -130 1875 155 0 7 chr2 11682127 11682437 -241574146 - AluSg SINE Alu -2 308 1 305 233 44 0 chr2 11682539 11682629 -241573954 + LTR50 LTR ERVL 702 795 0 588 275 17 26 chr2 11682646 11682879 -241573704 - L1M4 LINE L1 -3705 2441 2211 24 0 0 0 chr2 11683824 11683848 -241572735 + AT_rich Low_complexity Low_complexity 1 24 0 490 277 154 0 chr2 11684208 11684386 -241572197 + MIR SINE MIR 7 210 -52 3238 141 125 29 chr2 11684552 11685206 -241571377 + LTR62 LTR ERVK 1 717 -2 1266 123 4 25 chr2 11685644 11685879 -241570704 - AluY SINE Alu -81 230 1 530 258 58 21 chr2 11685975 11686165 -241570418 + L2 LINE L2 3081 3277 -36 504 250 277 57 chr2 11686401 11686737 -241569846 + MLT1H LTR MaLR 123 532 -17 263 290 32 65 chr2 11686839 11686963 -241569620 - MIR SINE MIR -5 257 138 670 225 57 103 chr2 11686989 11687251 -241569332 + MIR SINE MIR 13 262 0 399 280 91 7 chr2 11687267 11687410 -241569173 - MIR SINE MIR -38 224 70 1911 128 10 3 chr2 11687416 11687712 -241568871 + AluSx SINE Alu 1 298 -14 328 333 98 0 chr2 11688491 11688623 -241567960 + L2 LINE L2 3122 3266 -6 613 235 15 0 chr2 11690413 11690545 -241566038 - ERVL LTR ERVL -3592 2172 2039 420 211 22 0 chr2 11690547 11690637 -241565946 - ERVL LTR ERVL -3640 2124 2033 * 5011 241 25 5 chr2 11690636 11691741 -241564842 - ERVL LTR ERVL -3642 2122 996 1082 212 126 62 chr2 11692058 11692430 -241564153 - MSTD LTR MaLR 0 396 1 1819 204 15 33 chr2 11692549 11692946 -241563637 - MLT1B LTR MaLR 0 390 1 329 344 70 16 chr2 11693452 11693638 -241562945 - MIR SINE MIR -47 215 20 1640 164 21 11 chr2 11694160 11694446 -241562137 - AluJo SINE Alu -23 289 1 328 239 142 81 chr2 11694991 11695188 -241561395 + MER3 DNA MER1_type 1 209 0 * 559 242 99 37 chr2 11695039 11695200 -241561383 - MER3 DNA MER1_type -3 206 36 373 354 34 82 chr2 11695837 11696131 -241560452 - L2 LINE L2 -1 3271 2992 568 256 28 40 chr2 11696340 11696516 -241560067 - MER77 LTR ERV1 -35 570 397 216 225 0 0 chr2 11696526 11696566 -241560017 + T-rich Low_complexity Low_complexity 1 40 0 2165 105 3 13 chr2 11696569 11696884 -241559699 - AluSx SINE Alu 0 312 1 1144 231 19 115 chr2 11696892 11697311 -241559272 - MER77 LTR ERV1 -217 388 10 287 154 154 39 chr2 11697332 11697410 -241559173 - L1M4 LINE L1 -1498 4648 4562 814 132 69 6 chr2 11697441 11697600 -241558983 - AluSg/x SINE Alu -20 289 121 1157 151 46 18 chr2 11697947 11698300 -241558283 + LTR62 LTR ERVK 321 717 -2 397 243 77 5 chr2 11698621 11698773 -241557810 - MIR SINE MIR -2 260 8 * 423 340 70 51 chr2 11698740 11699155 -241557428 + L2 LINE L2 2247 2669 -645 526 157 0 0 chr2 11699247 11699330 -241557253 + AluSg/x SINE Alu 216 298 -11 2340 88 0 0 chr2 11699334 11699641 -241556942 + AluY SINE Alu 1 307 -4 367 310 195 25 chr2 11699685 11699885 -241556698 + MIR SINE MIR 20 253 -9 2097 120 0 0 chr2 11700215 11700514 -241556069 + AluSx SINE Alu 1 299 -13 2992 144 44 4 chr2 11700551 11701029 -241555554 - LOR1a LTR ERV1 0 497 1 594 301 47 10 chr2 11701305 11701498 -241555085 - MIR SINE MIR 0 262 63 280 175 21 134 chr2 11701570 11701667 -241554916 + MER112 DNA MER1_type 2 87 -173 1828 168 0 0 chr2 11701670 11701967 -241554616 - AluJb SINE Alu -15 297 1 418 254 62 72 chr2 11703539 11703585 -241552998 - MIR SINE MIR -69 193 148 2314 130 24 11 chr2 11703585 11703954 -241552629 - THE1C LTR MaLR -1 374 1 418 254 62 72 chr2 11703954 11704100 -241552483 - MIR SINE MIR -114 148 3 2194 120 30 73 chr2 11704114 11704475 -241552108 - L1MA5A LINE L1 -5 6292 5954 1925 150 0 0 chr2 11704475 11704788 -241551795 - AluSq SINE Alu 0 313 1 2194 120 30 73 chr2 11704788 11704893 -241551690 - L1MA5A LINE L1 -343 5954 5846 2790 230 92 8 chr2 11705172 11706385 -241550198 + L1ME2 LINE L1 4666 6001 -165 2184 157 76 40 chr2 11706385 11706830 -241549753 + LOR1b LTR ERV1 1 461 0 2790 230 92 8 chr2 11706830 11707007 -241549576 + L1ME2 LINE L1 6001 6162 -4 1387 255 103 18 chr2 11707012 11707749 -241548834 + L1ME3A LINE L1 5152 5949 -221 2131 100 40 3 chr2 11707969 11708269 -241548314 - AluSx SINE Alu -1 311 1 385 220 44 13 chr2 11708909 11709068 -241547515 + (TA)n Simple_repeat Simple_repeat 1 164 0 207 176 78 39 chr2 11710189 11710201 -241546382 + MIR SINE MIR 85 95 -113 2633 88 30 11 chr2 11710201 11710565 -241546018 - THE1C LTR MaLR -4 371 1 207 176 78 39 chr2 11710565 11710603 -241545980 + MIR SINE MIR 95 137 -71 279 258 194 0 chr2 11710609 11710702 -241545881 - L2 LINE L2 -5 3308 3198 2717 142 60 39 chr2 11710702 11711188 -241545395 - LOR1a LTR ERV1 0 497 2 190 228 132 70 chr2 11711321 11711435 -241545148 + MIR SINE MIR 142 262 0 445 252 0 32 chr2 11711569 11711692 -241544891 - MER5A DNA MER1_type -39 150 32 185 81 65 32 chr2 11712773 11712835 -241543748 + A-rich Low_complexity Low_complexity 5 68 0 23 54 0 0 chr2 11712838 11712875 -241543708 + AT_rich Low_complexity Low_complexity 1 37 0 696 219 14 123 chr2 11713045 11713264 -241543319 - MER77 LTR ERV1 -401 204 10 331 264 80 85 chr2 11713285 11713394 -241543189 - L1M4 LINE L1 -1498 4648 4540 1910 151 21 0 chr2 11713394 11713679 -241542904 - AluSx SINE Alu -21 291 1 331 264 80 85 chr2 11713679 11713753 -241542830 - L1M4 LINE L1 -1606 4540 4467 2221 114 7 0 chr2 11713753 11714042 -241542541 - AluSx SINE Alu -21 291 1 331 264 80 85 chr2 11714042 11714282 -241542301 - L1M4 LINE L1 -1679 4467 4226 1760 215 134 5 chr2 11714287 11714728 -241541855 - MLT1D LTR MaLR -2 503 6 413 283 85 46 chr2 11714730 11715037 -241541546 - L1M4 LINE L1 -1916 4230 3912 226 234 99 18 chr2 11715145 11715256 -241541327 - MLT1H1 LTR MaLR -124 431 312 323 262 37 80 chr2 11716908 11717034 -241539549 + MER5A DNA MER1_type 4 121 -68 2009 141 7 3 chr2 11717034 11717332 -241539251 - AluJb SINE Alu -13 299 1 323 262 37 80 chr2 11717332 11717392 -241539191 + MER5A DNA MER1_type 121 182 -7 2238 145 90 0 chr2 11717964 11718343 -241538240 - MLT2C2 LTR ERVL -51 413 1 2677 39 0 3 chr2 11718441 11718751 -241537832 + AluY SINE Alu 1 309 -2 463 200 85 54 chr2 11719614 11719744 -241536839 - MIR SINE MIR -50 212 79 1759 168 3 29 chr2 11719941 11720251 -241536332 + AluJb SINE Alu 1 302 -10 531 248 12 56 chr2 11720713 11720874 -241535709 - MER63A DNA MER1_type 0 210 57 3265 67 11 61 chr2 11721026 11721310 -241535273 - L1PB1 LINE L1 -4 6147 5893 2179 89 0 24 chr2 11721310 11721603 -241534980 + AluSx SINE Alu 1 286 -26 3265 67 11 61 chr2 11721603 11721779 -241534804 - L1PB1 LINE L1 -258 5893 5710 2278 93 0 10 chr2 11721866 11722166 -241534417 + AluY SINE Alu 1 297 -14 226 363 116 14 chr2 11722356 11722502 -241534081 + L2 LINE L2 3107 3267 -5 434 264 10 1 chr2 11723081 11723191 -241533392 + MIR SINE MIR 35 143 -67 315 336 66 8 chr2 11723893 11724015 -241532568 - MIR SINE MIR -113 149 21 209 338 0 26 chr2 11724028 11724105 -241532478 + MIR SINE MIR 108 182 -80 301 257 230 9 chr2 11724553 11724666 -241531917 + MIR SINE MIR 69 206 -56 22 56 0 0 chr2 11726527 11726563 -241530020 + AT_rich Low_complexity Low_complexity 1 36 0 333 255 185 32 chr2 11726619 11726776 -241529807 - MIR SINE MIR -62 200 20 198 309 217 0 chr2 11727095 11727325 -241529258 - L2 LINE L2 -533 2781 2502 352 319 77 11 chr2 11728260 11728442 -241528141 + MIR SINE MIR 19 212 -50 222 310 69 0 chr2 11728597 11728655 -241527928 - L2 LINE L2 -1 3271 3210 6904 147 43 6 chr2 11729230 11731100 -241525483 + L1PA11 LINE L1 4263 6174 0 2344 141 14 3 chr2 11731100 11731447 -241525136 + L1PA15 LINE L1 5797 6147 -18 264 88 0 0 chr2 11731499 11731533 -241525050 - U2 snRNA snRNA -154 34 1 477 237 15 38 chr2 11731843 11731974 -241524609 - L1M2c LINE L1 -4652 2137 2010 238 263 102 25 chr2 11734310 11734428 -241522155 + MIR SINE MIR 123 249 -13 213 370 22 11 chr2 11734506 11734598 -241521985 + MIR SINE MIR 23 115 -147 2163 98 7 0 chr2 11734673 11734950 -241521633 - AluSq SINE Alu -11 302 24 594 194 94 18 chr2 11734950 11735120 -241521463 + MIR SINE MIR 40 222 -40 2200 115 81 16 chr2 11735419 11735740 -241520843 - MER61A LTR ERV1 0 343 2 207 130 296 0 chr2 11735786 11735840 -241520743 + L2 LINE L2 3241 3310 -3 198 211 53 0 chr2 11736006 11736044 -241520539 + L2 LINE L2 3210 3249 -23 1502 187 159 6 chr2 11736263 11736578 -241520005 - MLT1A1 LTR MaLR 0 365 3 241 243 63 27 chr2 11736587 11736698 -241519885 - L1ME LINE L1 -261 5860 5746 182 315 37 0 chr2 11737204 11737258 -241519325 - L3b LINE CR1 -22 1561 1506 1822 164 7 10 chr2 11737524 11737822 -241518761 - AluSx SINE Alu -15 297 1 277 309 73 41 chr2 11737970 11738190 -241518393 - L2 LINE L2 -1763 1551 1325 2444 203 52 15 chr2 11738800 11739338 -241517245 - MER74A LTR ERVL 0 558 1 336 232 181 14 chr2 11740474 11740612 -241515971 - MIR SINE MIR -28 234 74 231 275 11 44 chr2 11740791 11740882 -241515701 + MER103 DNA DNA 20 107 -59 2077 138 16 0 chr2 11741538 11741843 -241514740 - AluSx SINE Alu -2 310 1 2422 181 56 11 chr2 11742309 11742774 -241513809 + MER66B LTR ERV1 1 486 0 369 286 40 16 chr2 11742798 11742924 -241513659 + MIR SINE MIR 20 148 -114 1330 137 124 29 chr2 11742964 11743301 -241513282 + MSTA LTR MaLR 1 375 0 313 301 54 62 chr2 11744054 11744200 -241512383 - MIR SINE MIR -64 198 47 226 310 216 0 chr2 11745095 11745211 -241511372 + MIR SINE MIR 49 189 -73 366 23 0 0 chr2 11745712 11745755 -241510828 + (TCCA)n Simple_repeat Simple_repeat 2 44 0 2552 48 3 0 chr2 11745766 11746060 -241510523 - AluY SINE Alu -16 295 1 200 304 18 0 chr2 11746069 11746125 -241510458 - L2 LINE L2 -16 3256 3200 943 221 5 5 chr2 11746194 11746398 -241510185 - L1M4 LINE L1 -1277 4869 4666 2688 236 32 6 chr2 11746879 11747594 -241508989 - L1M4 LINE L1 -974 5172 4439 284 309 37 0 chr2 11747597 11747678 -241508905 + MER58C DNA MER1_type 1 84 -131 183 80 0 0 chr2 11747686 11747711 -241508872 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 384 224 47 0 chr2 11747712 11747797 -241508786 + MER58C DNA MER1_type 126 214 -1 2758 255 75 14 chr2 11747828 11748461 -241508122 - L1M4 LINE L1 -1705 4441 3735 2015 125 3 20 chr2 11748461 11748757 -241507826 - AluSx SINE Alu -21 291 1 2758 255 75 14 chr2 11748757 11749030 -241507553 - L1M4 LINE L1 -2411 3735 3480 896 104 149 0 chr2 11749242 11749376 -241507207 - AluSg/x SINE Alu -13 297 144 337 73 0 0 chr2 11749377 11749418 -241507165 - Alu SINE Alu -249 53 13 204 40 0 0 chr2 11749790 11749815 -241506768 + (CCA)n Simple_repeat Simple_repeat 1 25 0 2313 105 0 0 chr2 11749856 11750150 -241506433 - AluSx SINE Alu -18 294 1 269 320 59 30 chr2 11750273 11750414 -241506169 - MIR SINE MIR -64 144 16 415 277 202 16 chr2 11751079 11751332 -241505251 + L2 LINE L2 3002 3301 -12 216 167 0 0 chr2 11751345 11751381 -241505202 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 189 313 157 17 chr2 11751415 11751530 -241505053 + MIR3 SINE MIR 10 140 -68 1856 120 38 17 chr2 11751884 11752175 -241504408 - L1MA4A LINE L1 -11 6292 5996 2716 130 26 71 chr2 11752177 11753077 -241503506 - L1MA4A LINE L1 -577 5726 4867 627 134 0 10 chr2 11753078 11753175 -241503408 + MER4A LTR ERV1 3 98 -566 1591 124 6 95 chr2 11753175 11753532 -241503051 + MER4A LTR ERV1 261 664 0 8323 218 38 20 chr2 11753535 11756693 -241499890 - L1M4 LINE L1 -1278 5570 1491 2108 129 3 3 chr2 11756693 11757003 -241499580 - AluSg SINE Alu 0 310 1 8323 218 38 20 chr2 11757003 11758436 -241498147 - L1M4 LINE L1 -5357 1491 85 422 252 38 8 chr2 11758482 11758613 -241497970 - MIR SINE MIR -62 200 66 1126 252 43 41 chr2 11759080 11759425 -241497158 + L1ME3A LINE L1 5820 6165 -5 413 279 75 7 chr2 11759594 11759741 -241496842 - MIR SINE MIR -76 186 30 212 260 104 10 chr2 11760252 11760348 -241496235 - MIR SINE MIR -97 165 61 21 0 0 0 chr2 11761493 11761514 -241495069 + AT_rich Low_complexity Low_complexity 1 21 0 193 209 23 0 chr2 11762083 11762126 -241494457 - MIR SINE MIR -114 148 105 512 296 23 68 chr2 11762715 11762916 -241493667 - MIR SINE MIR -1 261 52 216 0 0 0 chr2 11762916 11762940 -241493643 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2094 106 7 0 chr2 11762940 11763223 -241493360 - AluSg SINE Alu -25 285 1 512 296 23 68 chr2 11763223 11763284 -241493299 - MIR SINE MIR -208 54 10 819 242 119 40 chr2 11764316 11764431 -241492152 + MLT1J2 LTR MaLR 37 141 -309 1020 303 45 34 chr2 11764431 11764873 -241491710 - LTR16A LTR ERVL -3 447 1 819 242 119 40 chr2 11764873 11765034 -241491549 + MLT1J2 LTR MaLR 141 335 -115 2204 119 3 0 chr2 11765113 11765415 -241491168 - AluSx SINE Alu -9 303 1 204 362 60 0 chr2 11765639 11765755 -241490828 + MIR SINE MIR 1 123 -139 548 204 81 65 chr2 11766800 11766986 -241489597 + MER53 DNA DNA 1 189 0 299 164 77 87 chr2 11767812 11767916 -241488667 + MIR SINE MIR 124 226 -36 225 317 43 61 chr2 11767988 11768218 -241488365 + MIR SINE MIR 27 252 -10 1304 174 9 0 chr2 11768331 11768544 -241488039 - AluJb SINE Alu -12 300 86 1397 159 145 64 chr2 11768689 11769048 -241487535 - MLT1B LTR MaLR 0 390 3 784 174 39 13 chr2 11769116 11769271 -241487312 + MLT1B LTR MaLR 232 390 0 979 220 56 60 chr2 11771564 11772006 -241484577 - MLT1D LTR MaLR -7 498 3 408 274 22 7 chr2 11772185 11772320 -241484263 + MIR3 SINE MIR 46 182 -26 290 274 105 48 chr2 11772628 11772752 -241483831 + MIR SINE MIR 81 211 -51 934 252 147 42 chr2 11772827 11773255 -241483328 + L2 LINE L2 2841 3313 0 1614 218 32 41 chr2 11773352 11773793 -241482790 - MER101 LTR ERV1 -27 447 11 283 204 177 53 chr2 11773808 11774034 -241482549 - L2 LINE L2 -678 2636 2383 257 342 46 7 chr2 11774329 11774481 -241482102 + MIR SINE MIR 99 256 -6 634 274 34 26 chr2 11775207 11775441 -241481142 - MIR SINE MIR -6 256 21 243 0 0 0 chr2 11776888 11776915 -241479668 + (T)n Simple_repeat Simple_repeat 1 27 0 203 208 125 28 chr2 11777371 11777443 -241479140 - L2 LINE L2 -202 3070 2992 2524 140 7 74 chr2 11777720 11778104 -241478479 + MSTB LTR MaLR 1 351 -75 2369 75 3 35 chr2 11778104 11778423 -241478160 - AluY SINE Alu -2 309 1 2524 140 7 74 chr2 11778423 11778495 -241478088 + MSTB LTR MaLR 351 426 0 1021 206 31 5 chr2 11779687 11779881 -241476702 + MLT2D LTR ERVL 122 320 -94 270 105 0 0 chr2 11779900 11779938 -241476645 - Tigger2 DNA MER2_type -401 2317 2280 * 412 143 0 0 chr2 11779936 11779999 -241476584 - Tigger2 DNA MER2_type -2649 69 7 265 88 0 0 chr2 11779996 11780030 -241476553 + MLT2D LTR ERVL 487 520 0 * 3785 210 28 67 chr2 11780031 11781337 -241475246 + MLT1B-int LTR MaLR 2 1370 -1 2080 163 26 16 chr2 11781338 11781724 -241474859 + MLT1B LTR MaLR 1 390 0 2300 69 0 21 chr2 11782579 11782900 -241473683 - AluY SINE Alu 0 315 1 182 273 18 0 chr2 11783378 11783433 -241473150 + MIR SINE MIR 151 206 -56 1878 189 17 3 chr2 11783823 11784173 -241472410 + THE1A LTR MaLR 1 355 0 352 302 39 44 chr2 11784525 11784707 -241471876 + MIR3 SINE MIR 19 199 -9 378 238 90 16 chr2 11784764 11784886 -241471697 + MIR SINE MIR 81 211 -51 235 297 26 87 chr2 11785608 11785837 -241470746 + L3 LINE CR1 796 1010 -567 347 280 125 12 chr2 11786401 11786569 -241470014 + L3 LINE CR1 1173 1359 -218 537 261 46 7 chr2 11787263 11787416 -241469167 - MIR SINE MIR -73 189 31 242 316 140 0 chr2 11787461 11787575 -241469008 - L2 LINE L2 -5 3267 3138 259 247 0 24 chr2 11787869 11787954 -241468629 - L2 LINE L2 -207 3065 2983 847 112 12 18 chr2 11789070 11789239 -241467344 + (TCTA)n Simple_repeat Simple_repeat 4 171 0 2193 165 22 3 chr2 11789302 11789660 -241466923 + MLT1A1 LTR MaLR 1 365 0 218 95 24 0 chr2 11789665 11789707 -241466876 + (CA)n Simple_repeat Simple_repeat 2 44 0 2377 107 0 7 chr2 11790871 11791180 -241465403 + AluSx SINE Alu 1 307 -5 387 283 40 7 chr2 11791929 11792081 -241464502 - MIR SINE MIR 0 262 106 1727 182 63 17 chr2 11792116 11792463 -241464120 - MLT1B LTR MaLR 0 390 28 208 214 0 0 chr2 11793002 11793044 -241463539 + MIR SINE MIR 118 159 -103 390 255 183 0 chr2 11793108 11793256 -241463327 - MIR SINE MIR -14 248 75 211 296 16 72 chr2 11795312 11795437 -241461146 + L2 LINE L2 2911 3028 -244 492 219 34 41 chr2 11795573 11795767 -241460816 + MIR SINE MIR 14 205 -57 822 298 103 21 chr2 11795816 11796227 -241460356 + L1ME3A LINE L1 5119 5495 -675 1053 183 0 0 chr2 11796227 11796402 -241460181 - FAM SINE Alu 0 175 1 822 298 103 21 chr2 11796402 11796707 -241459876 + L1ME3A LINE L1 5495 5894 -276 216 283 38 4 chr2 11797195 11797297 -241459286 + MIR SINE MIR 82 188 -20 2023 128 0 27 chr2 11798831 11799128 -241457455 - AluSx SINE Alu -19 293 5 1180 199 84 117 chr2 11799304 11799732 -241456851 - MLT2D LTR ERVL 0 414 1 298 354 78 5 chr2 11800398 11800590 -241455993 + MIR SINE MIR 21 226 -36 3012 119 9 0 chr2 11801958 11802385 -241454198 + MER57B LTR ERV1 1 431 -3 662 307 21 17 chr2 11803952 11804135 -241452448 + MIR SINE MIR 2 188 -74 3414 133 0 2 chr2 11804135 11804633 -241451950 + LOR1a LTR ERV1 1 497 0 662 307 21 17 chr2 11804633 11804687 -241451896 + MIR SINE MIR 188 240 -22 2119 106 32 16 chr2 11806408 11806719 -241449864 + THE1C LTR MaLR 1 316 -59 499 73 59 0 chr2 11809849 11809917 -241446666 + THE1C LTR MaLR 304 375 0 187 250 217 0 chr2 11810131 11810191 -241446392 - MIR3 SINE MIR -22 186 114 21 57 0 0 chr2 11810309 11810344 -241446239 + AT_rich Low_complexity Low_complexity 1 35 0 224 326 0 22 chr2 11810470 11810562 -241446021 - MIR SINE MIR -122 140 51 4111 184 28 73 chr2 11810916 11811861 -241444722 - L1MB7 LINE L1 -6 6178 5191 507 33 0 0 chr2 11811861 11811922 -241444661 + (CA)n Simple_repeat Simple_repeat 2 62 0 4111 184 28 73 chr2 11811922 11812265 -241444318 - L1MB7 LINE L1 -993 5191 4967 1988 117 46 0 chr2 11812265 11812548 -241444035 - AluY SINE Alu -15 296 1 4111 184 28 73 chr2 11812548 11812675 -241443908 - L1MB7 LINE L1 -1217 4967 4836 321 324 63 42 chr2 11813061 11813345 -241443238 + L1MC/D LINE L1 5353 5642 -2166 22 35 0 0 chr2 11813617 11813646 -241442937 + AT_rich Low_complexity Low_complexity 1 29 0 2554 71 0 0 chr2 11813923 11814231 -241442352 + AluY SINE Alu 1 308 -3 4156 169 18 35 chr2 11814465 11815244 -241441339 - L1MB3 LINE L1 -1 6182 5417 201 302 87 63 chr2 11816761 11816795 -241439788 - L2 LINE L2 -1 3312 3280 1819 255 22 13 chr2 11816795 11817258 -241439325 + MLT1C LTR MaLR 1 467 0 201 302 87 63 chr2 11817258 11817349 -241439234 - L2 LINE L2 -33 3280 3184 452 294 8 0 chr2 11819723 11819842 -241436741 - MIR SINE MIR -108 154 35 226 188 0 21 chr2 11821488 11821536 -241435047 + (TA)n Simple_repeat Simple_repeat 1 47 0 230 269 19 67 chr2 11821548 11821608 -241434975 + MIR SINE MIR 164 218 -44 1935 192 14 11 chr2 11821608 11821972 -241434611 - MLT1A1 LTR MaLR 0 365 1 230 269 19 67 chr2 11821972 11822015 -241434568 + MIR SINE MIR 218 262 0 1161 44 0 7 chr2 11822876 11823013 -241433570 - AluY SINE Alu -175 136 1 2174 204 54 78 chr2 11823023 11823149 -241433434 - L1ME1 LINE L1 -5 6161 6034 930 117 0 0 chr2 11823149 11823277 -241433306 + L1PA10 LINE L1 6031 6158 -10 2174 204 54 78 chr2 11823277 11823781 -241432802 - L1ME1 LINE L1 -132 6034 5546 3464 176 47 43 chr2 11823790 11824535 -241432048 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11825940 11825961 -241430622 + (A)n Simple_repeat Simple_repeat 1 21 0 578 295 57 5 chr2 11826441 11826651 -241429932 - MIR SINE MIR -3 259 39 347 306 49 22 chr2 11827273 11827456 -241429127 + L2 LINE L2 2311 2498 -816 1090 249 9 0 chr2 11827724 11827953 -241428630 - MIR SINE MIR -10 252 22 360 185 126 89 chr2 11828032 11828167 -241428416 - MIR SINE MIR -83 179 40 307 336 25 16 chr2 11828273 11828395 -241428188 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11828542 11828569 -241428014 + (TC)n Simple_repeat Simple_repeat 1 28 0 1958 253 55 28 chr2 11829824 11830589 -241425994 - L1ME3 LINE L1 -42 6120 5292 269 250 14 0 chr2 11830587 11830659 -241425924 + L1M LINE L1 5323 5395 -767 * 744 311 86 17 chr2 11831310 11831661 -241424922 + MLT1I LTR MaLR 1 375 -34 299 274 163 26 chr2 11832821 11832974 -241423609 - Charlie8 DNA MER1_type -2201 216 43 850 284 135 48 chr2 11833309 11833796 -241422787 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11833796 11833832 -241422751 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 850 284 135 48 chr2 11833832 11834342 -241422241 + L2 LINE L2 2659 3297 -16 2446 145 31 3 chr2 11834342 11834734 -241421849 - MER57A LTR ERV1 0 403 1 850 284 135 48 chr2 11834734 11834752 -241421831 + L2 LINE L2 3297 3312 -1 1743 220 128 15 chr2 11834859 11835313 -241421270 + MLT1D LTR MaLR 1 505 0 2010 56 16 0 chr2 11835474 11835726 -241420857 + AluY SINE Alu 50 305 -6 210 325 0 38 chr2 11835928 11836008 -241420575 - MIR SINE MIR -138 124 48 288 284 55 31 chr2 11836847 11836974 -241419609 + L2 LINE L2 3141 3270 -2 21 71 0 0 chr2 11837166 11837208 -241419375 + AT_rich Low_complexity Low_complexity 1 42 0 395 290 80 23 chr2 11837243 11837419 -241419164 - MIR SINE MIR -57 205 20 219 283 0 0 chr2 11837427 11837487 -241419096 + CT-rich Low_complexity Low_complexity 2 61 0 387 254 90 25 chr2 11838707 11838829 -241417754 - LTR16C LTR ERVL -10 481 352 544 203 32 8 chr2 11838836 11838959 -241417624 + MER45B DNA AcHobo 3 128 -912 1503 201 60 6 chr2 11838962 11839276 -241417307 + MER45B DNA AcHobo 710 1040 0 577 266 35 18 chr2 11839279 11839448 -241417135 - LTR16C LTR ERVL -141 350 179 954 276 108 26 chr2 11839800 11840188 -241416395 - MLT1E2 LTR MaLR -2 624 205 2518 187 71 2 chr2 11840228 11840720 -241415863 - L1MB5 LINE L1 -8 6166 5641 529 219 270 0 chr2 11840725 11840862 -241415721 - MLT1E2 LTR MaLR -442 184 11 408 253 12 0 chr2 11841318 11841401 -241415182 + L2 LINE L2 3186 3269 -3 520 349 121 35 chr2 11843111 11843444 -241413139 + L2 LINE L2 2485 2788 -484 654 196 73 34 chr2 11843444 11843623 -241412960 + MER53 DNA DNA 2 187 -2 520 349 121 35 chr2 11843623 11844016 -241412567 + L2 LINE L2 2788 3271 -1 352 330 81 32 chr2 11845522 11845743 -241410840 - MIR SINE MIR -22 240 9 327 275 17 97 chr2 11845848 11846079 -241410504 + MIR SINE MIR 19 223 -39 202 311 11 98 chr2 11847021 11847204 -241409379 + MIR SINE MIR 22 188 -74 1500 159 77 126 chr2 11847700 11848191 -241408392 + MLT1C LTR MaLR 1 467 0 259 305 86 9 chr2 11848893 11848998 -241407585 + L2 LINE L2 3156 3268 -4 183 268 0 36 chr2 11849326 11849382 -241407201 - MIR3 SINE MIR -50 158 105 513 286 134 0 chr2 11849390 11849607 -241406976 + MIR SINE MIR 3 248 -14 285 224 17 0 chr2 11849629 11849687 -241406896 - MIR SINE MIR -113 95 37 2862 88 14 11 chr2 11849834 11850197 -241406386 + THE1B LTR MaLR 1 364 0 361 301 73 1 chr2 11850197 11850331 -241406252 - MIR SINE MIR -62 146 31 318 221 0 67 chr2 11850674 11850778 -241405805 - L2 LINE L2 -61 3252 3156 2217 116 0 0 chr2 11851139 11851431 -241405152 - AluSc SINE Alu -16 293 2 394 298 43 14 chr2 11851669 11851811 -241404772 - MIR3 SINE MIR -65 143 15 532 291 137 4 chr2 11852283 11852500 -241404083 - MIR SINE MIR -6 256 15 2039 135 3 0 chr2 11852696 11852985 -241403598 - AluSx SINE Alu -21 291 2 2068 122 3 20 chr2 11853900 11854204 -241402379 - AluSx SINE Alu -13 299 1 1127 183 77 37 chr2 11854861 11855291 -241401292 - MLT1B LTR MaLR -16 451 1 520 263 0 0 chr2 11855291 11855401 -241401182 - MER69A DNA AcHobo -67 110 1 186 43 0 0 chr2 11855623 11855646 -241400937 + (CCA)n Simple_repeat Simple_repeat 1 23 0 215 292 14 0 chr2 11855854 11855926 -241400657 - MIR SINE MIR -70 138 66 220 308 92 17 chr2 11857009 11857129 -241399454 + MIR SINE MIR 127 255 -7 436 295 69 17 chr2 11857437 11857610 -241398973 + MIR SINE MIR 56 237 -25 209 182 0 0 chr2 11857627 11857660 -241398923 + (ATG)n Simple_repeat Simple_repeat 2 34 0 188 276 40 26 chr2 11857676 11857752 -241398831 - MIR SINE MIR -3 259 183 761 230 59 11 chr2 11857766 11857953 -241398630 + AluJo SINE Alu 116 311 -1 205 305 37 49 chr2 11858096 11858178 -241398405 - MIR SINE MIR -161 101 21 224 373 7 14 chr2 11858651 11858793 -241397790 - MIR SINE MIR -71 191 51 266 270 302 25 chr2 11859082 11859241 -241397342 + MIR SINE MIR 12 214 -48 321 335 61 49 chr2 11859947 11860111 -241396472 - L2 LINE L2 0 3272 3107 285 119 0 0 chr2 11860311 11860353 -241396230 - 5S rRNA rRNA -79 42 1 28 0 0 0 chr2 11860712 11860740 -241395843 + AT_rich Low_complexity Low_complexity 1 28 0 218 158 232 49 chr2 11861064 11861146 -241395437 + L2 LINE L2 3169 3265 -7 2277 97 0 7 chr2 11861502 11861800 -241394783 - AluY SINE Alu -13 298 3 209 372 41 28 chr2 11861807 11861952 -241394631 + L2 LINE L2 3119 3265 -7 1964 180 18 13 chr2 11862247 11862631 -241393952 + MLT2D LTR ERVL 1 482 -38 387 144 48 20 chr2 11862631 11862777 -241393806 + (TCTA)n Simple_repeat Simple_repeat 4 153 0 258 56 0 0 chr2 11862777 11862813 -241393770 + (TC)n Simple_repeat Simple_repeat 1 36 0 434 312 81 60 chr2 11863057 11863490 -241393093 + LTR16A1 LTR ERVL 16 457 0 186 273 23 0 chr2 11863499 11863543 -241393040 + L2 LINE L2 3216 3260 -12 2379 87 3 0 chr2 11863611 11863909 -241392674 - AluSc SINE Alu -10 299 1 2068 122 3 20 chr2 11864344 11864648 -241391935 + AluSx SINE Alu 1 299 -13 2039 135 3 0 chr2 11865563 11865852 -241390731 + AluSx SINE Alu 2 291 -21 532 291 137 4 chr2 11866048 11866265 -241390318 + MIR SINE MIR 15 256 -6 394 298 43 14 chr2 11866737 11866879 -241389704 + MIR3 SINE MIR 15 162 -65 2217 116 0 0 chr2 11867117 11867409 -241389174 + AluSc SINE Alu 2 293 -16 318 221 0 67 chr2 11867770 11867874 -241388709 + L2 LINE L2 3156 3252 -61 361 301 73 1 chr2 11868217 11868351 -241388232 + MIR SINE MIR 31 172 -62 2862 88 14 11 chr2 11868351 11868714 -241387869 - THE1B LTR MaLR 0 364 1 285 224 17 0 chr2 11868861 11868919 -241387664 + MIR SINE MIR 37 95 -113 513 286 134 0 chr2 11868941 11869158 -241387425 - MIR SINE MIR -14 248 3 183 268 0 36 chr2 11869166 11869222 -241387361 + MIR3 SINE MIR 105 158 -50 259 305 86 9 chr2 11869550 11869655 -241386928 - L2 LINE L2 -4 3268 3156 1500 159 77 126 chr2 11870358 11870849 -241385734 - MLT1C LTR MaLR 0 467 1 202 311 11 98 chr2 11871345 11871528 -241385055 - MIR SINE MIR -74 188 22 327 275 17 97 chr2 11872471 11872702 -241383881 - MIR SINE MIR -39 223 19 352 330 81 32 chr2 11872807 11873028 -241383555 + MIR SINE MIR 9 240 -22 520 349 121 35 chr2 11874534 11874927 -241381656 - L2 LINE L2 -1 3271 2913 654 196 73 34 chr2 11874927 11875106 -241381477 - MER53 DNA DNA -2 187 2 520 349 121 35 chr2 11875106 11875439 -241381144 - L2 LINE L2 -359 2913 2485 408 253 12 0 chr2 11877149 11877232 -241379351 - L2 LINE L2 -3 3269 3186 529 219 270 0 chr2 11877688 11877825 -241378758 + MLT1E2 LTR MaLR 11 184 -442 2518 187 71 2 chr2 11877830 11878322 -241378261 + L1MB5 LINE L1 5641 6166 -8 954 276 108 26 chr2 11878362 11878750 -241377833 + MLT1E2 LTR MaLR 205 624 -2 544 278 35 18 chr2 11879102 11879271 -241377312 + LTR16C LTR ERVL 179 350 -141 1503 201 60 6 chr2 11879274 11879588 -241376995 - MER45B DNA AcHobo 0 1040 710 544 203 32 8 chr2 11879591 11879714 -241376869 - MER45B DNA AcHobo -912 128 3 387 254 90 25 chr2 11879721 11879843 -241376740 + LTR16C LTR ERVL 352 481 -10 219 283 0 0 chr2 11881063 11881123 -241375460 + GA-rich Low_complexity Low_complexity 2 61 0 395 290 80 23 chr2 11881131 11881307 -241375276 + MIR SINE MIR 20 205 -57 21 71 0 0 chr2 11881342 11881384 -241375199 + AT_rich Low_complexity Low_complexity 1 42 0 288 284 55 31 chr2 11881576 11881703 -241374880 - L2 LINE L2 -2 3270 3141 210 325 0 38 chr2 11882541 11882621 -241373962 + MIR SINE MIR 48 124 -138 2672 36 0 3 chr2 11882823 11883130 -241373453 - AluY SINE Alu -5 306 1 2174 204 54 78 chr2 11883140 11883266 -241373317 - L1ME1 LINE L1 -5 6161 6034 930 117 0 0 chr2 11883266 11883394 -241373189 + L1PA10 LINE L1 6031 6158 -10 2174 204 54 78 chr2 11883394 11883898 -241372685 - L1ME1 LINE L1 -132 6034 5546 3464 176 47 43 chr2 11883907 11884652 -241371931 - L1MD1 LINE L1 0 6242 5495 189 0 0 0 chr2 11886057 11886078 -241370505 + (A)n Simple_repeat Simple_repeat 1 21 0 578 295 57 5 chr2 11886558 11886768 -241369815 - MIR SINE MIR -3 259 39 347 306 49 22 chr2 11887390 11887573 -241369010 + L2 LINE L2 2311 2498 -816 1090 249 9 0 chr2 11887841 11888070 -241368513 - MIR SINE MIR -10 252 22 360 185 126 89 chr2 11888149 11888284 -241368299 - MIR SINE MIR -83 179 40 307 336 25 16 chr2 11888390 11888512 -241368071 - MIR3 SINE MIR -3 205 83 203 0 37 0 chr2 11888659 11888686 -241367897 + (TC)n Simple_repeat Simple_repeat 1 28 0 1958 253 55 28 chr2 11889941 11890706 -241365877 - L1ME3 LINE L1 -42 6120 5292 269 250 14 0 chr2 11890704 11890776 -241365807 + L1M LINE L1 5323 5395 -769 * 744 311 86 17 chr2 11891427 11891778 -241364805 + MLT1I LTR MaLR 1 375 -34 299 274 163 26 chr2 11892938 11893091 -241363492 - Charlie8 DNA MER1_type -2201 216 43 850 284 135 48 chr2 11893426 11893913 -241362670 + L2 LINE L2 2216 2659 -654 192 111 0 0 chr2 11893913 11893949 -241362634 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 850 284 135 48 chr2 11893949 11894459 -241362124 + L2 LINE L2 2659 3297 -16 2446 145 31 3 chr2 11894459 11894851 -241361732 - MER57A LTR ERV1 0 403 1 850 284 135 48 chr2 11894851 11894869 -241361714 + L2 LINE L2 3297 3312 -1 1743 220 128 15 chr2 11894977 11895431 -241361152 + MLT1D LTR MaLR 1 505 0 2032 58 16 0 chr2 11895592 11895850 -241360733 + AluY SINE Alu 50 311 0 204 338 59 0 chr2 11895856 11895924 -241360659 + L2 LINE L2 3196 3267 -5 1622 152 27 0 chr2 11896724 11896987 -241359596 + AluJb SINE Alu 9 278 -34 276 30 0 0 chr2 11896992 11897025 -241359558 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2104 88 36 0 chr2 11897192 11897501 -241359082 + AluSx SINE Alu 1 319 0 4352 128 14 2 chr2 11898429 11899056 -241357527 + MER41B LTR ERV1 1 635 0 184 364 99 13 chr2 11899394 11899545 -241357038 - MIR SINE MIR -50 212 49 2327 108 0 0 chr2 11899615 11899921 -241356662 - AluSq SINE Alu -5 308 3 22 0 0 0 chr2 11899928 11899950 -241356633 + AT_rich Low_complexity Low_complexity 1 22 0 1969 154 0 0 chr2 11900593 11900886 -241355697 + AluSx SINE Alu 1 293 -19 323 259 98 76 chr2 11901092 11901328 -241355255 - L1ME4a LINE L1 -51 6070 5830 207 240 0 52 chr2 11901328 11901353 -241355230 + (TA)n Simple_repeat Simple_repeat 1 26 -65 1924 157 3 3 chr2 11901353 11901652 -241354931 - AluSx SINE Alu -13 299 1 207 240 0 52 chr2 11901652 11901677 -241354906 + (TA)n Simple_repeat Simple_repeat 26 51 -40 2301 170 2 38 chr2 11901677 11902095 -241354488 + MER57A LTR ERV1 1 403 0 207 240 0 52 chr2 11902095 11902139 -241354444 + (TA)n Simple_repeat Simple_repeat 51 91 0 226 275 122 8 chr2 11902143 11902274 -241354309 - L1ME4a LINE L1 -1989 5819 5674 2530 164 143 2 chr2 11902296 11902752 -241353831 - MLT2B1 LTR ERVL 0 520 1 281 202 191 12 chr2 11902752 11902836 -241353747 - L1ME4a LINE L1 -462 5659 5561 985 287 54 58 chr2 11903769 11904490 -241352093 - L2 LINE L2 -11 3302 2587 239 277 79 20 chr2 11904605 11904706 -241351877 - MIR SINE MIR -136 126 20 378 325 96 25 chr2 11905013 11905210 -241351373 - MIR SINE MIR -2 260 50 2389 70 0 3 chr2 11906973 11907273 -241349310 - AluY SINE Alu -12 299 1 295 192 0 0 chr2 11907850 11907902 -241348681 + MIR SINE MIR 130 181 -81 21 0 0 0 chr2 11909506 11909527 -241347056 + AT_rich Low_complexity Low_complexity 1 21 0 197 234 47 0 chr2 11910183 11910247 -241346336 + MIR SINE MIR 84 150 -112 2323 100 20 0 chr2 11910398 11910698 -241345885 + AluSc SINE Alu 1 306 -3 303 303 73 0 chr2 11910932 11911041 -241345542 - L2 LINE L2 0 3313 3197 210 259 0 37 chr2 11911960 11912014 -241344569 - L2 LINE L2 -12 3301 3250 * 333 295 29 0 chr2 11912003 11912108 -241344475 - MIR SINE MIR -99 163 56 332 306 12 23 chr2 11913298 11913471 -241343112 + (TATG)n Simple_repeat Simple_repeat 3 173 0 294 188 6 50 chr2 11913486 11913646 -241342937 + (TA)n Simple_repeat Simple_repeat 1 153 0 419 266 9 9 chr2 11913659 11913772 -241342811 + (TATG)n Simple_repeat Simple_repeat 2 114 0 336 200 0 0 chr2 11913816 11913886 -241342697 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 248 261 0 31 chr2 11914756 11914821 -241341762 + MIR SINE MIR 127 189 -73 197 83 28 0 chr2 11915804 11915840 -241340743 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 207 252 27 90 chr2 11915848 11915959 -241340624 - L2 LINE L2 -20 3252 3149 * 216 221 29 0 chr2 11915955 11916023 -241340560 + MIR SINE MIR 147 216 -46 1560 182 3 20 chr2 11916026 11916322 -241340261 - AluJo SINE Alu -7 305 15 195 186 0 0 chr2 11917173 11917216 -241339367 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 755 189 124 0 chr2 11917622 11917760 -241338823 - L1MA9 LINE L1 0 6312 6148 288 0 0 0 chr2 11917760 11917792 -241338791 + (TG)n Simple_repeat Simple_repeat 1 32 0 755 189 124 0 chr2 11917792 11917822 -241338761 - L1MA9 LINE L1 -164 6148 6123 258 293 160 9 chr2 11917822 11917928 -241338655 - MIR3 SINE MIR -42 166 45 840 274 112 6 chr2 11919150 11919490 -241337093 - L1MC4 LINE L1 -197 7845 7470 963 232 82 44 chr2 11919493 11919917 -241336666 - MER45C DNA AcHobo 0 953 441 269 238 40 40 chr2 11919963 11920064 -241336519 - MIR3 SINE MIR -12 196 96 2305 122 0 0 chr2 11920624 11920935 -241335648 + AluSp SINE Alu 1 311 -2 259 346 60 22 chr2 11921649 11921831 -241334752 + L2 LINE L2 3082 3270 -2 302 258 32 11 chr2 11922164 11922257 -241334326 + L2 LINE L2 2942 3036 -236 378 310 113 31 chr2 11922261 11922490 -241334093 - MIR SINE MIR 0 262 15 190 125 0 0 chr2 11922487 11922519 -241334064 + L2 LINE L2 371 402 -2912 * 2231 102 0 16 chr2 11923542 11923857 -241332726 + AluSq SINE Alu 1 310 -3 389 259 15 53 chr2 11923865 11923996 -241332587 + MIR SINE MIR 71 196 -66 261 315 67 11 chr2 11924044 11924133 -241332450 + MIR3 SINE MIR 10 103 -105 902 175 0 110 chr2 11924331 11924559 -241332024 - MLT1B LTR MaLR -187 203 1 195 114 0 0 chr2 11925517 11925552 -241331031 + (A)n Simple_repeat Simple_repeat 1 35 0 356 272 123 0 chr2 11927095 11927209 -241329374 + MIR SINE MIR 25 152 -110 620 275 69 15 chr2 11927484 11927823 -241328760 - L2 LINE L2 -250 3063 2709 282 303 61 15 chr2 11928137 11928269 -241328314 - L2 LINE L2 -38 3234 3097 368 308 68 0 chr2 11928780 11928897 -241327686 - L2 LINE L2 -3 3269 3145 306 344 46 33 chr2 11928916 11929067 -241327516 + L3 LINE CR1 1269 1421 -156 2642 53 0 0 chr2 11930305 11930609 -241325974 - AluY SINE Alu -7 304 1 206 292 0 0 chr2 11930788 11930836 -241325747 + MIR SINE MIR 51 98 -164 180 0 0 0 chr2 11931669 11931689 -241324894 + (A)n Simple_repeat Simple_repeat 1 20 0 296 280 147 42 chr2 11931795 11931938 -241324645 - MIR3 SINE MIR -21 187 30 1711 164 34 24 chr2 11932548 11932840 -241323743 - AluSx SINE Alu -17 295 1 412 249 22 88 chr2 11933004 11933185 -241323398 - MER5B DNA MER1_type -6 172 4 691 196 12 6 chr2 11933561 11933724 -241322859 + L1MA7 LINE L1 6117 6280 -11 198 271 0 0 chr2 11933892 11933940 -241322643 + L2 LINE L2 3266 3313 0 220 330 186 0 chr2 11934387 11934602 -241321981 + L2 LINE L2 2279 2533 -781 180 0 0 0 chr2 11934606 11934626 -241321957 + (T)n Simple_repeat Simple_repeat 1 20 0 287 378 10 31 chr2 11935762 11935955 -241320628 - MER5A DNA MER1_type 0 189 1 242 290 57 53 chr2 11937219 11937464 -241319119 - L2 LINE L2 -188 3084 2839 276 296 103 78 chr2 11937580 11938056 -241318527 + L2 LINE L2 2383 2870 -444 265 300 0 0 chr2 11938276 11938346 -241318237 + L2 LINE L2 3244 3313 0 331 151 0 0 chr2 11938362 11938415 -241318168 - MLT2A2 LTR ERVL 0 453 401 288 229 0 0 chr2 11938418 11938501 -241318082 + (TA)n Simple_repeat Simple_repeat 1 83 0 311 244 47 0 chr2 11938510 11938596 -241317987 - L1MC4 LINE L1 -1339 6703 6614 449 258 0 8 chr2 11938602 11939132 -241317451 + (TA)n Simple_repeat Simple_repeat 1 525 0 323 202 0 91 chr2 11939136 11939235 -241317348 - L1MC4 LINE L1 -1339 6703 6614 240 130 0 0 chr2 11939247 11939293 -241317290 + (TA)n Simple_repeat Simple_repeat 2 47 0 2601 82 69 11 chr2 11939297 11939673 -241316910 - MLT2A1 LTR ERVL -46 398 1 1001 172 18 0 chr2 11940267 11940436 -241316147 + AluSg/x SINE Alu 128 299 -13 533 281 18 6 chr2 11941573 11941740 -241314843 + MER5B DNA MER1_type 6 174 -4 395 290 10 0 chr2 11941794 11941894 -241314689 - MER5A DNA MER1_type -80 109 9 1383 132 168 16 chr2 11942310 11942560 -241314023 - LTR18B LTR ERVL 0 614 327 1603 187 25 16 chr2 11942963 11943284 -241313299 + MLT1A1 LTR MaLR 24 347 -18 252 0 0 0 chr2 11944422 11944450 -241312133 + (TG)n Simple_repeat Simple_repeat 2 29 0 181 250 62 16 chr2 11945146 11945210 -241311373 - MIR SINE MIR -69 139 73 213 108 0 0 chr2 11945349 11945386 -241311197 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 1914 291 197 31 chr2 11945550 11946914 -241309669 + L2 LINE L2 115 1738 -1576 267 31 0 0 chr2 11946914 11946946 -241309637 + (CA)n Simple_repeat Simple_repeat 2 33 0 1914 291 197 31 chr2 11946946 11947042 -241309541 + L2 LINE L2 1738 1817 -1497 416 221 83 66 chr2 11947272 11947453 -241309130 - MLT1J1 LTR MaLR -241 205 22 326 232 0 49 chr2 11947446 11947528 -241309055 + MLT1J2 LTR MaLR 373 450 0 * 182 188 0 21 chr2 11948036 11948084 -241308499 + GA-rich Low_complexity Low_complexity 3 49 0 2210 304 96 23 chr2 11948241 11949606 -241306977 + L2 LINE L2 1842 3312 -1 6791 69 7 20 chr2 11949983 11951742 -241304841 - L1PA7 LINE L1 0 6154 4404 24971 109 13 19 chr2 11951742 11955492 -241301091 - L1PA7 LINE L1 -2408 3738 11 321 68 0 0 chr2 11955792 11955836 -241300747 + (TG)n Simple_repeat Simple_repeat 2 45 0 382 241 141 11 chr2 11956535 11956726 -241299857 + MIR SINE MIR 47 262 0 255 31 0 0 chr2 11957296 11957328 -241299255 + (TG)n Simple_repeat Simple_repeat 1 32 0 1918 222 181 62 chr2 11961887 11962612 -241293971 - MER21B LTR ERV1 -52 811 1 2287 121 0 0 chr2 11963138 11963444 -241293139 - AluSx SINE Alu -6 306 1 2189 100 14 3 chr2 11964818 11965107 -241291476 - AluSg SINE Alu -18 292 1 441 0 0 0 chr2 11966115 11966164 -241290419 + (TG)n Simple_repeat Simple_repeat 2 50 0 306 275 25 17 chr2 11966172 11966292 -241290291 - MER5A DNA MER1_type -34 155 35 352 301 52 20 chr2 11966384 11966537 -241290046 + L2 LINE L2 2924 3081 -232 285 271 121 7 chr2 11968005 11968145 -241288438 + MIR SINE MIR 69 224 -38 2368 97 3 0 chr2 11968173 11968481 -241288102 + AluY SINE Alu 1 309 -2 753 328 104 7 chr2 11968626 11969041 -241287542 + HAL1 LINE L1 4 458 -2049 434 71 0 62 chr2 11969043 11969156 -241287427 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 251 137 0 20 chr2 11969150 11969201 -241287382 + (TCTA)n Simple_repeat Simple_repeat 2 51 0 * 1249 62 6 6 chr2 11969202 11969379 -241287204 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 964 129 20 0 chr2 11969381 11969528 -241287055 - AluJo SINE Alu -7 305 156 659 146 10 0 chr2 11969528 11969631 -241286952 - AluJo SINE Alu -207 105 2 5574 169 42 18 chr2 11969769 11970240 -241286343 - L1MC1 LINE L1 -7 6326 5868 1580 118 5 0 chr2 11970240 11970461 -241286122 - AluSg/x SINE Alu -7 305 84 5574 169 42 18 chr2 11970461 11971117 -241285466 - L1MC1 LINE L1 -465 5868 5172 2474 81 0 3 chr2 11973169 11973476 -241283107 - AluSc SINE Alu -1 308 3 4737 237 83 57 chr2 11973500 11976480 -241280103 - L1MB8 LINE L1 -1 6988 3931 350 287 46 9 chr2 11976877 11977081 -241279502 - L1MB8 LINE L1 -6298 557 92 261 0 0 0 chr2 11977805 11977834 -241278749 + (TG)n Simple_repeat Simple_repeat 2 30 0 197 128 21 0 chr2 11978158 11978205 -241278378 + (CA)n Simple_repeat Simple_repeat 1 48 0 399 148 52 7 chr2 11978227 11978382 -241278201 + (CA)n Simple_repeat Simple_repeat 2 163 0 364 139 57 8 chr2 11978402 11978524 -241278059 + (CA)n Simple_repeat Simple_repeat 2 129 0 183 214 24 0 chr2 11979219 11979261 -241277322 - L2 LINE L2 -4 3309 3267 256 341 12 0 chr2 11980579 11980661 -241275922 - L2 LINE L2 -8 3264 3182 237 297 99 39 chr2 11980885 11981067 -241275516 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 11981278 11981299 -241275284 + AT_rich Low_complexity Low_complexity 1 21 0 1407 167 13 99 chr2 11981721 11981985 -241274598 + AluJb SINE Alu 3 238 -74 3461 64 21 0 chr2 11981985 11982420 -241274163 - MLT2A1 LTR ERVL 0 444 1 1407 167 13 99 chr2 11982420 11982467 -241274116 + AluJb SINE Alu 238 287 -25 22 0 0 0 chr2 11982760 11982782 -241273801 + AT_rich Low_complexity Low_complexity 1 22 0 303 326 77 11 chr2 11982784 11982965 -241273618 + MIR SINE MIR 20 212 -50 285 336 38 0 chr2 11984687 11984818 -241271765 + MIR SINE MIR 121 256 -6 468 178 68 42 chr2 11986421 11986539 -241270044 + MER69 DNA AcHobo 6 126 -2400 924 186 67 74 chr2 11986805 11986978 -241269605 - MER21B LTR ERV1 -128 735 563 1755 114 41 131 chr2 11986978 11987390 -241269193 - THE1C LTR MaLR 0 375 1 924 186 67 74 chr2 11987390 11987485 -241269098 - MER21B LTR ERV1 -300 563 469 1403 194 20 14 chr2 11988337 11988630 -241267953 - L1MD1 LINE L1 0 6242 5948 355 148 0 0 chr2 11988639 11988700 -241267883 - L1MD1 LINE L1 -538 5704 5644 294 217 0 0 chr2 11989169 11989238 -241267345 + CT-rich Low_complexity Low_complexity 2 70 0 265 147 15 29 chr2 11989269 11989337 -241267246 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 669 70 21 65 chr2 11989352 11989538 -241267045 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 601 276 18 18 chr2 11990093 11990310 -241266273 - L1ME3 LINE L1 -2 6160 5944 263 363 14 7 chr2 11990576 11990722 -241265861 - MIR3 SINE MIR -3 205 59 2346 168 8 3 chr2 11990822 11991210 -241265373 + MLT1B LTR MaLR 1 390 0 610 244 21 73 chr2 11991263 11991497 -241265086 - MIR SINE MIR -11 251 30 396 328 0 8 chr2 11994215 11994346 -241262237 + MIR SINE MIR 20 149 -113 662 293 52 4 chr2 11994591 11994820 -241261763 - MIR SINE MIR -22 240 1 204 40 0 0 chr2 11995194 11995219 -241261364 + (A)n Simple_repeat Simple_repeat 1 25 0 202 200 0 0 chr2 11995498 11995538 -241261045 + (TG)n Simple_repeat Simple_repeat 1 40 0 1319 232 21 26 chr2 11995787 11996127 -241260456 + MER46C DNA MER2_type 1 338 0 307 295 62 8 chr2 11996131 11996260 -241260323 - MIR SINE MIR -70 192 57 298 242 63 32 chr2 11996420 11996515 -241260068 + MER5A DNA MER1_type 9 106 -83 944 182 13 89 chr2 11996988 11997224 -241259359 - MER20 DNA MER1_type -1 218 1 423 223 140 70 chr2 11998653 11998953 -241257630 + MER5C DNA MER1_type 1 321 -3 1545 173 24 0 chr2 11999591 11999845 -241256738 + AluJo SINE Alu 36 295 -17 534 216 46 33 chr2 11999925 12000078 -241256505 + MIR SINE MIR 68 222 -40 865 261 29 86 chr2 12000370 12000848 -241255735 - L2 LINE L2 -2 3311 2861 1374 170 25 4 chr2 12001403 12001680 -241254903 + L1MA8 LINE L1 6006 6288 -3 387 277 34 0 chr2 12002036 12002155 -241254428 - MIR SINE MIR -56 152 30 215 327 40 30 chr2 12002327 12002428 -241254155 - L2 LINE L2 -32 3240 3139 440 291 43 52 chr2 12003229 12003463 -241253120 - MLT1J1 LTR MaLR -13 498 202 650 268 81 55 chr2 12003696 12004081 -241252502 + MLT1J LTR MaLR 114 508 -3 881 219 15 5 chr2 12004194 12004390 -241252193 - MER58A DNA MER1_type 0 224 27 1441 200 0 32 chr2 12004713 12004998 -241251585 + AluJb SINE Alu 1 276 -36 2164 104 14 3 chr2 12006691 12006980 -241249603 - AluSg SINE Alu -18 292 1 279 0 0 0 chr2 12007954 12007985 -241248598 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 293 46 9 chr2 12008711 12008915 -241247668 + L1ME3A LINE L1 92 557 -6298 376 336 0 8 chr2 12011062 12011193 -241245390 + MIR SINE MIR 20 149 -113 662 293 52 4 chr2 12011438 12011667 -241244916 - MIR SINE MIR -22 240 1 399 291 0 18 chr2 12013753 12013863 -241242720 - L2 LINE L2 -5 3308 3201 344 287 106 60 chr2 12014029 12014443 -241242140 + L1ME3A LINE L1 4151 4583 -2374 2319 102 0 0 chr2 12015441 12015746 -241240837 - AluY SINE Alu -6 305 1 325 271 121 7 chr2 12015774 12015914 -241240669 - MIR SINE MIR -38 224 69 180 227 76 61 chr2 12016318 12016384 -241240199 - L2 LINE L2 -67 3246 3180 865 306 81 13 chr2 12017948 12018418 -241238165 + L1ME3A LINE L1 6145 6646 -335 318 157 0 0 chr2 12019030 12019080 -241237503 - MLT1A1 LTR MaLR 0 374 325 1775 183 30 11 chr2 12019080 12019441 -241237142 - MER73 LTR ERVL 0 644 277 1554 154 10 29 chr2 12019470 12019776 -241236807 - MER73 LTR ERVL -344 300 1 1112 209 67 47 chr2 12019776 12020073 -241236510 - MLT1A1 LTR MaLR -45 320 18 257 354 12 0 chr2 12021047 12021129 -241235454 - L2 LINE L2 -8 3264 3182 295 291 99 39 chr2 12021354 12021536 -241235047 - MIR SINE MIR -4 258 66 21 0 0 0 chr2 12021747 12021768 -241234815 + AT_rich Low_complexity Low_complexity 1 21 0 1942 128 0 73 chr2 12022194 12022522 -241234061 + AluSx SINE Alu 7 310 -2 1469 226 7 7 chr2 12023588 12023889 -241232694 - AluJb SINE Alu -1 301 1 3290 167 29 10 chr2 12023913 12024429 -241232154 + MER1A DNA MER1_type 1 526 -1 279 79 0 0 chr2 12024492 12024530 -241232053 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2027 112 3 18 chr2 12024532 12024817 -241231766 - AluSx SINE Alu -31 281 1 285 51 0 0 chr2 12024834 12024873 -241231710 + (TA)n Simple_repeat Simple_repeat 1 39 0 1222 67 6 6 chr2 12026626 12026805 -241229778 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 929 136 20 0 chr2 12026807 12026954 -241229629 - AluJo SINE Alu -7 305 156 702 146 10 0 chr2 12026954 12027057 -241229526 - AluJo SINE Alu -207 105 2 2344 168 86 17 chr2 12027195 12027670 -241228913 - L1MC1 LINE L1 -7 6326 5819 1363 152 5 0 chr2 12027670 12027887 -241228696 - AluSg/x SINE Alu -11 299 82 3072 197 12 3 chr2 12027887 12028542 -241228041 - L1MC1 LINE L1 -501 5832 5172 8105 139 104 35 chr2 12030460 12031930 -241224653 - THE1C-int LTR MaLR -9 1571 1 2325 154 11 16 chr2 12031930 12032307 -241224276 - THE1C LTR MaLR 0 375 1 702 260 116 0 chr2 12032417 12032752 -241223831 - L1MEc LINE L1 -5285 1111 738 505 303 31 65 chr2 12032844 12033227 -241223356 - L1MEc LINE L1 -5918 478 109 400 263 9 26 chr2 12033222 12033336 -241223247 + L1ME1 LINE L1 6060 6330 -4 * 237 257 162 54 chr2 12033393 12033615 -241222968 + L1MD1 LINE L1 4740 4985 -1161 490 118 0 0 chr2 12033646 12033714 -241222869 - AluS SINE Alu -240 69 2 312 19 37 37 chr2 12034888 12034942 -241221641 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 601 122 35 29 chr2 12034995 12035167 -241221416 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 296 244 11 0 chr2 12035198 12035288 -241221295 + GA-rich Low_complexity Low_complexity 2 92 0 381 200 0 0 chr2 12035737 12035812 -241220771 + L1MD1 LINE L1 5644 5718 -524 1480 192 21 14 chr2 12035812 12036100 -241220483 + L1MD1 LINE L1 5950 6242 0 875 193 67 74 chr2 12036952 12037047 -241219536 + MER21B LTR ERV1 469 563 -300 1778 122 44 131 chr2 12037047 12037458 -241219125 + THE1C LTR MaLR 1 375 0 875 193 67 74 chr2 12037458 12037631 -241218952 + MER21B LTR ERV1 563 735 -128 456 178 68 42 chr2 12037897 12038015 -241218568 - MER69 DNA AcHobo -2400 126 6 321 348 28 33 chr2 12039618 12039799 -241216784 - MIR SINE MIR -6 256 77 1913 219 180 63 chr2 12045531 12046257 -241210326 - MER21B LTR ERV1 -52 811 1 2243 124 0 0 chr2 12046783 12047089 -241209494 - AluSx SINE Alu -6 306 1 196 279 62 47 chr2 12048148 12048277 -241208306 + MER5C DNA MER1_type 21 151 -173 450 291 43 52 chr2 12048293 12048527 -241208056 - MLT1J1 LTR MaLR -13 498 202 674 270 75 49 chr2 12048760 12049145 -241207438 + MLT1J LTR MaLR 114 508 -3 1132 187 5 5 chr2 12049258 12049456 -241207127 - MER58A DNA MER1_type 0 224 27 1784 139 0 28 chr2 12049779 12050066 -241206517 + AluJb SINE Alu 1 279 -33 181 370 30 10 chr2 12050287 12050387 -241206196 + MIR SINE MIR 93 194 -68 399 291 0 18 chr2 12052892 12053002 -241203581 - L2 LINE L2 -5 3308 3201 296 287 109 63 chr2 12053168 12053582 -241203001 + L1M4 LINE L1 3340 3772 -2374 2612 151 17 2 chr2 12054391 12054809 -241201774 - L1MB1 LINE L1 0 6168 5745 563 105 35 0 chr2 12054809 12054895 -241201688 + L1M3 LINE L1 5402 5490 -844 1305 170 74 22 chr2 12054897 12055231 -241201352 + MSTD LTR MaLR 1 396 0 1337 155 8 45 chr2 12055231 12055476 -241201107 + L1M3 LINE L1 5498 5733 -601 246 327 63 20 chr2 12055576 12055675 -241200908 + MIR SINE MIR 61 164 -44 203 270 27 40 chr2 12056875 12056949 -241199634 + MIR SINE MIR 117 189 -73 2481 137 8 14 chr2 12057835 12058201 -241198382 - THE1B LTR MaLR 0 364 1 1797 264 106 11 chr2 12058321 12058848 -241197735 - MLT1E LTR MaLR -7 586 10 202 356 74 18 chr2 12058973 12059136 -241197447 + L2 LINE L2 2590 2761 -553 24 0 0 0 chr2 12059693 12059717 -241196866 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr2 12060722 12060747 -241195836 + (A)n Simple_repeat Simple_repeat 1 25 0 229 175 0 48 chr2 12061222 12061265 -241195318 + (TTCA)n Simple_repeat Simple_repeat 1 42 -18 907 217 56 0 chr2 12061265 12061463 -241195120 + MER3 DNA MER1_type 1 209 0 229 175 0 48 chr2 12061463 12061482 -241195101 + (TTCA)n Simple_repeat Simple_repeat 42 60 0 25 0 0 0 chr2 12061695 12061720 -241194863 + AT_rich Low_complexity Low_complexity 1 25 0 318 26 0 0 chr2 12063206 12063245 -241193338 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 320 39 0 chr2 12063460 12063563 -241193020 + L3b LINE CR1 1241 1347 -236 269 276 33 98 chr2 12063631 12063906 -241192677 - L2 LINE L2 -187 3085 2829 2406 110 123 5 chr2 12066054 12066437 -241190146 + MSTA LTR MaLR 1 428 0 2466 88 0 0 chr2 12066747 12067055 -241189528 - AluSc SINE Alu -1 308 1 2294 139 55 31 chr2 12067574 12067992 -241188591 + MSTA LTR MaLR 1 428 0 188 316 98 60 chr2 12068004 12068137 -241188446 + L2 LINE L2 3127 3264 -8 254 207 0 0 chr2 12068254 12068312 -241188271 + L1MC4 LINE L1 6647 6704 -1338 333 215 15 0 chr2 12068506 12068571 -241188012 + L2 LINE L2 3193 3258 -55 391 202 55 55 chr2 12069147 12069330 -241187253 + L1MC5 LINE L1 7624 7806 -155 234 322 28 18 chr2 12069501 12069634 -241186949 - MIR3 SINE MIR -42 166 45 753 135 21 64 chr2 12069883 12070022 -241186561 + LTR39 LTR ERV1 2 134 -649 3562 139 214 13 chr2 12070022 12070792 -241185791 + MER21A LTR ERV1 1 925 -6 622 93 10 0 chr2 12070801 12070898 -241185685 + LTR39 LTR ERV1 133 230 -553 3701 153 21 40 chr2 12070901 12071626 -241184957 + MER50 LTR ERV1 1 711 -23 2746 184 12 38 chr2 12071664 12071871 -241184712 + LTR39 LTR ERV1 223 434 -349 2242 114 3 0 chr2 12071871 12072170 -241184413 - AluSx SINE Alu -12 300 1 2746 184 12 38 chr2 12072170 12072538 -241184045 + LTR39 LTR ERV1 434 783 0 2324 226 41 18 chr2 12073988 12074595 -241181988 + MLT1E2 LTR MaLR 1 621 -5 991 113 0 0 chr2 12074680 12074821 -241181762 + AluSc SINE Alu 168 308 -1 311 354 39 50 chr2 12075559 12075740 -241180843 - L1MEc LINE L1 -6024 372 194 1877 166 3 3 chr2 12075745 12076046 -241180537 - AluJb SINE Alu -3 309 9 3171 140 34 6 chr2 12076076 12076583 -241180000 + MER1A DNA MER1_type 1 521 -8 315 71 0 0 chr2 12076655 12076697 -241179886 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2022 112 3 18 chr2 12076699 12076984 -241179599 - AluSx SINE Alu -31 281 1 363 23 0 0 chr2 12077000 12077044 -241179539 + (TA)n Simple_repeat Simple_repeat 1 44 0 1894 144 0 72 chr2 12079374 12079707 -241176876 - AluSx SINE Alu -2 310 2 1385 188 44 44 chr2 12079746 12080066 -241176517 + MLT1A1 LTR MaLR 1 320 -45 1440 149 10 36 chr2 12080066 12080374 -241176209 + MER73 LTR ERVL 1 300 -344 1653 177 28 11 chr2 12080403 12080765 -241175818 + MER73 LTR ERVL 277 644 0 292 157 0 0 chr2 12080765 12080815 -241175768 + MLT1A1 LTR MaLR 316 365 0 942 297 56 18 chr2 12081452 12082320 -241174263 - L1ME LINE L1 -354 5808 4906 355 263 9 26 chr2 12082515 12082629 -241173954 - L1ME1 LINE L1 -4 6330 6060 * 425 311 34 48 chr2 12082624 12082917 -241173666 + L1MEc LINE L1 109 397 -5999 572 260 116 0 chr2 12083099 12083434 -241173149 + L1MEc LINE L1 738 1111 -5285 2169 151 11 16 chr2 12083544 12083921 -241172662 + THE1C LTR MaLR 1 375 0 7565 138 105 35 chr2 12083921 12085393 -241171190 + THE1C-int LTR MaLR 1 1574 -6 2023 168 16 16 chr2 12085399 12085774 -241170809 + THE1C LTR MaLR 1 375 0 2254 131 8 37 chr2 12086112 12086487 -241170096 - THE1B LTR MaLR 0 364 1 182 288 34 85 chr2 12086844 12086897 -241169686 + MIR SINE MIR 21 75 -187 2023 154 10 46 chr2 12086897 12087286 -241169297 + THE1C LTR MaLR 1 375 0 182 288 34 85 chr2 12087286 12087350 -241169233 + MIR SINE MIR 75 132 -130 2011 164 0 0 chr2 12088154 12088452 -241168131 - AluSx SINE Alu -14 298 1 23 78 0 0 chr2 12088800 12088851 -241167732 + AT_rich Low_complexity Low_complexity 1 51 0 306 209 23 23 chr2 12089073 12089159 -241167424 - MLT1J2 LTR MaLR -2 448 363 1317 203 137 34 chr2 12090146 12090590 -241165993 - L1MC5 LINE L1 -499 7462 6973 348 24 0 0 chr2 12090965 12091006 -241165577 + (GA)n Simple_repeat Simple_repeat 2 42 0 526 312 17 0 chr2 12091023 12091196 -241165387 - MLT1J2 LTR MaLR -274 176 1 281 182 82 39 chr2 12092491 12092604 -241163979 - MLT1J2 LTR MaLR -2 444 336 792 190 40 6 chr2 12092805 12092979 -241163604 + MER3 DNA MER1_type 1 180 -29 1574 70 8 66 chr2 12093274 12093518 -241163065 + MER30 DNA MER1_type 1 230 0 2213 126 0 13 chr2 12094576 12094885 -241161698 - AluSx SINE Alu -7 305 1 184 265 78 59 chr2 12095598 12095700 -241160883 + MIR SINE MIR 33 136 -72 226 345 103 0 chr2 12096557 12096673 -241159910 + L1MC/D LINE L1 5518 5645 -2163 411 56 0 0 chr2 12096820 12096874 -241159709 + (TG)n Simple_repeat Simple_repeat 2 55 0 349 305 85 61 chr2 12096877 12097123 -241159460 + L3 LINE CR1 923 1174 -403 1599 190 13 13 chr2 12097684 12097989 -241158594 + AluJo SINE Alu 1 305 -7 1215 246 40 70 chr2 12098005 12098435 -241158148 + MLT1J LTR MaLR 95 511 0 258 247 35 0 chr2 12098880 12098965 -241157618 - HAL1 LINE L1 -343 2164 2077 568 371 96 19 chr2 12099265 12099629 -241156954 - HAL1 LINE L1 -581 1926 1535 645 306 27 27 chr2 12100349 12100610 -241155973 + MIR SINE MIR 2 262 0 1312 243 41 17 chr2 12101048 12101464 -241155119 + MER31A LTR ERV1 56 481 -4 30 27 0 0 chr2 12101975 12102012 -241154571 + AT_rich Low_complexity Low_complexity 1 37 0 341 226 108 0 chr2 12102935 12103037 -241153546 + L2 LINE L2 1906 2018 -1296 202 330 115 35 chr2 12103061 12103322 -241153261 + L2 LINE L2 2157 2438 -876 225 206 0 0 chr2 12103709 12103772 -241152811 - L1MB8 LINE L1 -237 5941 5879 2435 171 5 18 chr2 12103840 12104280 -241152303 - Tigger2a DNA MER2_type 0 434 1 320 344 73 9 chr2 12104312 12104629 -241151954 - L1MB8 LINE L1 -335 5835 5499 2873 241 70 35 chr2 12104633 12106113 -241150470 - L1MEc LINE L1 -3125 3004 1513 833 110 123 7 chr2 12106118 12106273 -241150310 - LTR47A LTR ERVL -6 446 274 272 191 0 32 chr2 12106534 12106597 -241149986 - L1MEc LINE L1 -4764 1367 1307 587 281 63 24 chr2 12106676 12106929 -241149654 - LTR16C LTR ERVL -36 455 193 792 236 73 20 chr2 12107375 12107773 -241148810 - L1MEc LINE L1 -2962 3167 2749 258 305 36 6 chr2 12107756 12107923 -241148660 - HAL1 LINE L1 -1221 1286 1115 * 270 279 60 60 chr2 12108348 12108531 -241148052 - L1MEc LINE L1 -5638 481 299 279 0 0 0 chr2 12108670 12108701 -241147882 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 360 277 26 52 chr2 12108737 12108892 -241147691 - L1MEc LINE L1 -5966 153 3 342 294 159 23 chr2 12109098 12109312 -241147271 - MIR SINE MIR -11 251 9 1409 136 11 11 chr2 12109781 12110045 -241146538 + L1MA9 LINE L1 6043 6306 -6 195 100 0 0 chr2 12110046 12110076 -241146507 + (TA)n Simple_repeat Simple_repeat 2 31 0 1501 209 47 70 chr2 12111136 12111187 -241145396 + MLT1A1 LTR MaLR 1 52 -313 2329 100 3 3 chr2 12111187 12111498 -241145085 + AluSp SINE Alu 1 311 -2 1501 209 47 70 chr2 12111498 12111829 -241144754 + MLT1A1 LTR MaLR 52 365 0 2327 118 0 0 chr2 12112327 12112633 -241143950 - AluSq SINE Alu -7 306 1 2104 105 0 52 chr2 12112637 12112943 -241143640 - AluSc SINE Alu -19 290 1 275 188 0 0 chr2 12112992 12113056 -241143527 + MER53 DNA DNA 98 161 -28 * 295 242 11 0 chr2 12112999 12113090 -241143493 - MER53 DNA DNA -94 95 4 362 303 28 9 chr2 12113157 12113266 -241143317 + MIR SINE MIR 40 150 -112 498 299 140 43 chr2 12113315 12113335 -241143248 + MLT1J2 LTR MaLR 44 61 -389 2091 145 22 27 chr2 12113335 12113701 -241142882 + THE1B LTR MaLR 1 364 0 498 299 140 43 chr2 12113701 12113942 -241142641 + MLT1J2 LTR MaLR 61 354 -96 207 0 0 0 chr2 12113942 12113965 -241142618 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 498 299 140 43 chr2 12113965 12114073 -241142510 + MLT1J2 LTR MaLR 354 450 0 818 204 0 12 chr2 12114869 12115041 -241141542 - MLT1B LTR MaLR 0 467 298 21 0 0 0 chr2 12115117 12115138 -241141445 + AT_rich Low_complexity Low_complexity 1 21 0 677 188 18 100 chr2 12115138 12115308 -241141275 - FRAM SINE Alu -21 155 1 904 146 58 6 chr2 12115309 12115480 -241141103 - MLT1B LTR MaLR -210 180 1 417 180 0 0 chr2 12115974 12116063 -241140520 + (TA)n Simple_repeat Simple_repeat 1 89 0 52 17 0 0 chr2 12116063 12116122 -241140461 + AT_rich Low_complexity Low_complexity 1 59 0 721 197 0 0 chr2 12116123 12116245 -241140338 - FLAM_C SINE Alu -11 122 1 281 247 12 0 chr2 12116697 12116778 -241139805 + MLT1J1 LTR MaLR 364 445 -1 452 256 65 33 chr2 12117018 12117214 -241139369 - MIR3 SINE MIR 0 208 1 536 282 13 6 chr2 12117295 12117451 -241139132 + MIR SINE MIR 54 210 -52 233 393 12 24 chr2 12117987 12118155 -241138428 - MIR SINE MIR -50 212 47 355 184 70 0 chr2 12118911 12119025 -241137558 - MER69 DNA AcHobo -91 2435 2314 640 287 84 24 chr2 12119070 12119321 -241137262 + L2 LINE L2 3045 3310 -3 309 321 60 36 chr2 12119576 12119744 -241136839 + L2 LINE L2 2118 2289 -1025 261 263 53 11 chr2 12120724 12120819 -241135764 + HAL1b LINE L1 669 767 -581 758 265 78 81 chr2 12121104 12121208 -241135375 + L1MC4a LINE L1 5266 5369 -2439 1849 165 13 3 chr2 12121208 12121511 -241135072 + AluJb SINE Alu 1 306 -6 758 265 78 81 chr2 12121511 12122071 -241134512 + L1MC4a LINE L1 5369 5928 -1880 200 304 104 44 chr2 12122142 12122277 -241134306 - MIR3 SINE MIR -65 143 1 199 378 76 43 chr2 12122277 12122564 -241134019 - L2 LINE L2 -47 3225 2929 249 83 0 0 chr2 12122564 12122600 -241133983 + (TGAA)n Simple_repeat Simple_repeat 2 37 0 826 341 106 20 chr2 12122600 12123202 -241133381 - L2 LINE L2 -6 3307 2600 1940 92 30 4 chr2 12123202 12123464 -241133119 + AluSq SINE Alu 36 304 -9 826 341 106 20 chr2 12123464 12123711 -241132872 - L2 LINE L2 -713 2600 2376 25 0 0 0 chr2 12123894 12123919 -241132664 + AT_rich Low_complexity Low_complexity 1 25 0 442 256 41 58 chr2 12123926 12124098 -241132485 - MIR SINE MIR -73 189 21 185 180 20 0 chr2 12124122 12124172 -241132411 + CT-rich Low_complexity Low_complexity 1 51 0 1077 210 53 3 chr2 12124197 12124525 -241132058 - MER33 DNA MER1_type -19 305 1 2059 165 71 15 chr2 12124616 12125023 -241131560 - MSTB1 LTR MaLR 0 432 3 560 239 11 64 chr2 12126092 12126280 -241130303 + MER5B DNA MER1_type 1 178 0 542 209 15 0 chr2 12126388 12126522 -241130061 - Charlie1 DNA MER1_type 0 2761 2626 3550 166 27 11 chr2 12126563 12127220 -241129363 - MSTA-int LTR MaLR -983 668 1 2601 167 7 0 chr2 12127220 12127645 -241128938 - MSTA LTR MaLR 0 428 1 26 0 0 0 chr2 12128716 12128742 -241127841 + AT_rich Low_complexity Low_complexity 1 26 0 1827 151 0 14 chr2 12128742 12129033 -241127550 - AluSx SINE Alu -25 287 1 289 247 93 41 chr2 12129040 12129137 -241127446 + MIR SINE MIR 74 175 -87 200 274 48 0 chr2 12129518 12129580 -241127003 - MIR SINE MIR -117 145 81 1156 80 0 12 chr2 12129733 12129896 -241126687 - L1PA7 LINE L1 0 6154 5994 24 0 0 0 chr2 12130189 12130213 -241126370 + AT_rich Low_complexity Low_complexity 1 24 0 1729 168 30 0 chr2 12130492 12130831 -241125752 - MLT1B LTR MaLR 0 390 42 339 263 34 69 chr2 12130973 12131148 -241125435 + L1ME LINE L1 1030 1198 -5174 293 273 81 41 chr2 12131152 12131644 -241124939 + L1ME LINE L1 1101 1589 -4793 278 270 74 20 chr2 12131773 12131921 -241124662 - L1MC4a LINE L1 -1799 6009 5854 804 287 61 48 chr2 12132461 12133365 -241123218 - L1MEc LINE L1 -4602 2223 1148 458 405 25 25 chr2 12133814 12134211 -241122372 - L1MEc LINE L1 -5857 968 572 331 292 77 32 chr2 12134296 12134673 -241121910 + L1ME LINE L1 2346 2739 -3643 * 1228 260 53 80 chr2 12134672 12135296 -241121287 - L1MEc LINE L1 -5931 611 5 676 267 39 41 chr2 12135839 12136427 -241120156 - L1MEc LINE L1 -2974 3376 2708 300 221 123 26 chr2 12136666 12136820 -241119763 - L1MEc LINE L1 -4093 2438 2270 538 315 110 67 chr2 12137042 12137477 -241119106 - L1MEc LINE L1 -4581 1950 1497 238 258 31 10 chr2 12137482 12137579 -241119004 - L1ME LINE L1 -4553 1728 1630 420 288 57 36 chr2 12137582 12137820 -241118763 - L1ME LINE L1 -5009 1345 1115 2534 59 0 0 chr2 12137820 12138124 -241118459 + AluY SINE Alu 3 306 -5 420 288 57 36 chr2 12138124 12138163 -241118420 - L1ME LINE L1 -5239 1115 1078 1433 183 14 57 chr2 12138870 12139219 -241117364 + MLT1A1 LTR MaLR 1 334 -31 311 266 88 24 chr2 12140705 12140860 -241115723 - MIR SINE MIR -63 145 27 280 259 137 61 chr2 12141433 12141630 -241114953 - MIR SINE MIR -11 251 40 2354 101 0 0 chr2 12141631 12141937 -241114646 - AluSx SINE Alu -6 306 1 1952 138 51 28 chr2 12141961 12142317 -241114266 + THE1B LTR MaLR 1 364 0 206 328 0 0 chr2 12143377 12143435 -241113148 + L2 LINE L2 3215 3272 0 277 322 37 39 chr2 12143819 12144124 -241112459 - L2 LINE L2 -238 3034 2670 307 378 35 21 chr2 12145015 12145158 -241111425 - L2 LINE L2 -1 3271 3127 932 240 137 35 chr2 12145169 12145761 -241110822 - Charlie7 DNA MER1_type 0 2612 1961 4105 208 52 18 chr2 12145776 12145922 -241110661 + L1MB5 LINE L1 4108 4248 -1926 195 42 0 0 chr2 12145922 12145946 -241110637 + (CA)n Simple_repeat Simple_repeat 1 24 0 4105 208 52 18 chr2 12145946 12147792 -241108791 + L1MB5 LINE L1 4248 6167 -7 3953 198 56 6 chr2 12147792 12148771 -241107812 + MER45R DNA AcHobo 551 1578 -3 2656 187 19 67 chr2 12149174 12149817 -241106766 - LTR9 LTR ERV1 0 612 1 294 315 109 36 chr2 12150653 12150818 -241105765 + MIR SINE MIR 86 262 0 252 308 49 53 chr2 12151525 12151702 -241104881 + MIR SINE MIR 16 190 -57 1934 116 87 0 chr2 12152829 12153104 -241103479 - AluSx SINE Alu -13 299 1 623 327 137 27 chr2 12153104 12153578 -241103005 - L1MDa LINE L1 -4449 2091 1566 290 348 78 16 chr2 12154225 12154481 -241102102 - L2 LINE L2 -812 2502 2231 1192 183 5 5 chr2 12154660 12154907 -241101676 + AluJb SINE Alu 81 327 0 305 333 8 15 chr2 12154953 12155085 -241101498 + MIR3 SINE MIR 71 201 -7 4869 61 8 2 chr2 12155318 12155940 -241100643 + L1PA7 LINE L1 5527 6152 -2 314 331 101 22 chr2 12156258 12156397 -241100186 + L2 LINE L2 3122 3271 -1 419 345 46 11 chr2 12157624 12157798 -241098785 + MIR SINE MIR 47 226 -36 302 205 13 77 chr2 12157800 12157878 -241098705 - MIR3 SINE MIR -42 166 94 236 312 66 9 chr2 12157929 12158037 -241098546 - MIR SINE MIR -110 98 22 218 277 90 77 chr2 12158359 12158514 -241098069 + MIR SINE MIR 48 204 -58 254 308 39 0 chr2 12158730 12158808 -241097775 + MIR SINE MIR 118 198 -64 222 309 52 21 chr2 12160317 12160414 -241096169 + MIR SINE MIR 72 171 -91 198 258 200 71 chr2 12160937 12161092 -241095491 + MIR SINE MIR 88 262 0 22 0 0 0 chr2 12161457 12161479 -241095104 + AT_rich Low_complexity Low_complexity 1 22 0 2220 136 21 104 chr2 12162399 12162870 -241093713 - MSTB1 LTR MaLR 0 432 1 408 311 25 0 chr2 12163259 12163378 -241093205 - L2 LINE L2 -15 3298 3177 188 344 115 8 chr2 12163453 12163575 -241093008 + L2 LINE L2 2627 2761 -553 365 300 67 29 chr2 12164428 12164638 -241091945 - L2 LINE L2 -371 2943 2726 232 335 0 4 chr2 12165109 12165221 -241091362 + MER91B DNA MER1_type 1 111 -29 182 245 151 0 chr2 12165620 12165673 -241090910 + L2 LINE L2 3161 3221 -51 279 0 0 0 chr2 12165762 12165793 -241090790 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 220 307 80 13 chr2 12166554 12166629 -241089954 - L2 LINE L2 -27 3245 3166 4740 162 29 46 chr2 12166742 12167629 -241088954 + MER4D LTR ERV1 1 872 0 218 231 77 0 chr2 12167642 12167694 -241088889 + MIR SINE MIR 93 148 -60 465 125 0 0 chr2 12168896 12168968 -241087615 - L1P LINE L1 -747 5409 5338 4926 121 23 6 chr2 12168969 12169697 -241086886 + L1PA16 LINE L1 5426 6166 0 1699 187 59 44 chr2 12169697 12170077 -241086506 + Charlie1 DNA MER1_type 2149 2540 -221 2337 54 4 0 chr2 12170077 12170381 -241086202 + AluY SINE Alu 2 306 0 1699 187 59 44 chr2 12170381 12170474 -241086109 + Charlie1 DNA MER1_type 2540 2630 -131 306 344 52 28 chr2 12170677 12171040 -241085543 - HAL1b LINE L1 -809 539 168 260 280 129 8 chr2 12173191 12173323 -241083260 + MIR3 SINE MIR 40 187 -21 316 350 55 31 chr2 12173464 12173627 -241082956 + L2 LINE L2 3096 3262 -10 272 297 0 14 chr2 12173879 12173953 -241082630 - L2 LINE L2 0 3272 3200 1975 153 3 0 chr2 12174523 12174823 -241081760 - AluJb SINE Alu -11 301 1 182 216 27 0 chr2 12175011 12175048 -241081535 + MIR SINE MIR 85 122 -140 1629 201 23 50 chr2 12177723 12178107 -241078476 - MLT1A2 LTR MaLR 0 374 1 1513 161 50 101 chr2 12178180 12178558 -241078025 + MLT1A1 LTR MaLR 5 363 -2 410 280 62 101 chr2 12179379 12179571 -241077012 - L2 LINE L2 0 3272 3074 3383 187 94 13 chr2 12179571 12180244 -241076339 - LTR8A LTR ERV1 0 727 1 410 280 62 101 chr2 12180244 12180785 -241075798 - L2 LINE L2 -198 3074 2551 319 309 99 25 chr2 12181984 12182227 -241074356 + MIR SINE MIR 2 262 0 214 338 14 14 chr2 12182751 12182825 -241073758 + MIR SINE MIR 21 94 -114 237 65 0 0 chr2 12183596 12183627 -241072956 + (A)n Simple_repeat Simple_repeat 1 31 0 183 421 33 8 chr2 12184521 12184642 -241071941 - L2 LINE L2 -1 3271 3148 265 381 24 0 chr2 12185026 12185152 -241071431 - L2 LINE L2 -212 3060 2932 290 241 213 21 chr2 12185733 12185874 -241070709 + MIR3 SINE MIR 36 203 -5 197 347 165 0 chr2 12185963 12186084 -241070499 - MIR SINE MIR -16 246 106 1088 232 66 74 chr2 12186655 12187035 -241069548 - MLT1B LTR MaLR -4 386 10 447 289 39 56 chr2 12187135 12187236 -241069347 + MER5B DNA MER1_type 2 103 -75 2051 151 74 57 chr2 12187236 12187275 -241069308 - MLT2D LTR ERVL 0 414 377 384 22 0 0 chr2 12187275 12187320 -241069263 + (TG)n Simple_repeat Simple_repeat 2 46 0 2051 151 74 57 chr2 12187320 12187684 -241068899 - MLT2D LTR ERVL -37 377 4 447 289 39 56 chr2 12187684 12187696 -241068887 + MER5B DNA MER1_type 103 114 -64 2187 117 0 16 chr2 12187696 12188005 -241068578 - AluSx SINE Alu -8 304 1 447 289 39 56 chr2 12188005 12188070 -241068513 + MER5B DNA MER1_type 114 178 0 366 198 76 151 chr2 12188196 12188368 -241068215 - MER5B DNA MER1_type -3 175 17 183 125 75 25 chr2 12189229 12189269 -241067314 - MIR SINE MIR -185 77 36 498 218 0 0 chr2 12189302 12189458 -241067125 + (CA)n Simple_repeat Simple_repeat 2 157 0 291 324 65 74 chr2 12189460 12189905 -241066678 - L2 LINE L2 -13 3259 2819 2363 105 0 0 chr2 12190239 12190543 -241066040 + AluSx SINE Alu 1 304 -8 194 429 14 23 chr2 12190590 12190809 -241065774 + L2 LINE L2 2867 3083 -189 2169 173 52 26 chr2 12191132 12191553 -241065030 + MSTB1 LTR MaLR 1 432 0 1881 176 0 0 chr2 12191993 12192288 -241064295 + AluJo SINE Alu 1 295 -17 424 275 101 7 chr2 12193283 12193432 -241063151 - MLT1L LTR MaLR -123 492 330 7073 97 34 3 chr2 12194203 12195233 -241061350 + L1MA1 LINE L1 5238 6298 -4 2374 78 7 0 chr2 12195726 12196022 -241060561 + AluY SINE Alu 1 298 -13 311 263 150 15 chr2 12196029 12196162 -241060421 - MIR3 SINE MIR -28 180 30 1833 156 17 0 chr2 12196490 12196657 -241059926 - AluSx SINE Alu -12 300 124 279 0 0 0 chr2 12196657 12196688 -241059895 + (TG)n Simple_repeat Simple_repeat 2 32 0 1833 156 17 0 chr2 12196688 12196815 -241059768 - AluSx SINE Alu -188 124 1 355 313 53 0 chr2 12196965 12197096 -241059487 - MIR SINE MIR -37 225 88 1137 245 66 78 chr2 12199533 12199957 -241056626 + MLT1H LTR MaLR 3 421 -128 357 330 38 16 chr2 12200059 12200244 -241056339 - L2 LINE L2 -477 2837 2649 437 269 31 51 chr2 12201509 12201695 -241054888 - MIR SINE MIR -78 130 3 184 254 84 28 chr2 12201701 12201772 -241054811 - MIR3 SINE MIR -53 155 81 551 234 16 0 chr2 12202549 12202673 -241053910 - MER45A DNA AcHobo 0 178 53 367 343 12 35 chr2 12202880 12203052 -241053531 - MIR3 SINE MIR -37 171 4 273 323 129 46 chr2 12204018 12204235 -241052348 + L2 LINE L2 2185 2419 -895 515 289 109 0 chr2 12204444 12204600 -241051983 - MIR SINE MIR -84 178 6 1907 197 7 61 chr2 12204601 12205012 -241051571 + MLT1B LTR MaLR 2 390 0 201 245 0 0 chr2 12205720 12205769 -241050814 + (TGAA)n Simple_repeat Simple_repeat 3 51 0 267 248 50 50 chr2 12205791 12205912 -241050671 - LTR67 LTR ERVL -8 549 429 1360 209 26 11 chr2 12206748 12207021 -241049562 - AluJo SINE Alu -30 282 6 258 300 17 0 chr2 12207435 12207540 -241049043 + MIR SINE MIR 59 166 -64 1427 194 101 44 chr2 12207559 12207925 -241048658 - L1MB2 LINE L1 0 6171 5785 * 1450 215 34 11 chr2 12207923 12208305 -241048278 - L1M4c LINE L1 -3987 2397 2007 941 178 7 0 chr2 12208333 12208485 -241048098 - FRAM SINE Alu -30 146 1 455 230 0 58 chr2 12208495 12208634 -241047949 - L1M4c LINE L1 -4479 1905 1775 23 33 0 0 chr2 12208645 12208675 -241047908 + AT_rich Low_complexity Low_complexity 1 30 0 3411 11 0 0 chr2 12209035 12209412 -241047171 - L1HS LINE L1 -2 6153 5777 4526 21 0 0 chr2 12209412 12209935 -241046648 + L1P LINE L1 4245 4767 -1379 292 283 61 10 chr2 12210568 12210667 -241045916 + MIR SINE MIR 44 147 -61 2861 142 12 25 chr2 12211816 12212301 -241044282 + L1MA5 LINE L1 5812 6290 -10 251 336 185 14 chr2 12212462 12212608 -241043975 - MIR SINE MIR -64 144 22 200 323 95 13 chr2 12213115 12213273 -241043310 + MIR SINE MIR 86 256 -6 227 327 89 71 chr2 12213488 12213656 -241042927 - MIR SINE MIR -75 187 17 266 320 76 33 chr2 12216363 12216514 -241040069 + MIR3 SINE MIR 1 162 -66 240 278 106 33 chr2 12216942 12217093 -241039490 + MIR SINE MIR 48 209 -53 204 349 48 60 chr2 12217763 12217846 -241038737 - L2 LINE L2 -29 3243 3162 * 348 372 31 21 chr2 12217841 12218032 -241038551 - L2 LINE L2 -568 2746 2554 635 295 74 9 chr2 12218063 12218280 -241038303 - MIR SINE MIR -14 248 18 985 260 15 7 chr2 12218685 12218954 -241037629 - L1ME LINE L1 -505 5661 5391 5179 123 80 5 chr2 12218964 12219810 -241036773 - Tigger1 DNA MER2_type -1508 910 1 605 260 85 0 chr2 12219810 12220056 -241036527 - L1ME LINE L1 -1513 4633 4367 304 295 0 13 chr2 12220508 12220586 -241035997 + MIR SINE MIR 52 128 -80 633 299 120 4 chr2 12220701 12220935 -241035648 - MIR SINE MIR 0 262 2 248 186 0 17 chr2 12220965 12221024 -241035559 + L1MCa LINE L1 2006 2063 -4363 212 189 0 0 chr2 12221073 12221110 -241035473 + (TA)n Simple_repeat Simple_repeat 1 37 0 235 291 149 30 chr2 12222739 12222873 -241033710 - MIR3 SINE MIR -17 191 42 1949 119 46 3 chr2 12222881 12223166 -241033417 + AluSx SINE Alu 1 297 -15 2897 6 0 0 chr2 12223350 12223661 -241032922 + AluYb8 SINE Alu 3 313 -5 761 185 1 10 chr2 12223980 12224126 -241032457 + MLT1C LTR MaLR 337 466 -1 261 346 6 27 chr2 12224336 12224508 -241032075 - MIR SINE MIR -64 198 35 383 328 143 51 chr2 12224983 12225146 -241031437 - L3 LINE CR1 -3 1574 1427 1909 128 35 0 chr2 12225146 12225428 -241031155 - AluSx SINE Alu -20 292 1 383 328 143 51 chr2 12225428 12225557 -241031026 - L3 LINE CR1 -150 1427 1255 189 107 0 0 chr2 12225617 12225645 -241030938 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 287 276 16 81 chr2 12225679 12225726 -241030857 - MIR SINE MIR 0 262 214 1835 205 65 75 chr2 12225726 12226282 -241030301 + MLT2B3 LTR ERVL 1 550 -4 287 276 16 81 chr2 12226282 12226357 -241030226 - MIR SINE MIR -48 214 148 232 305 65 52 chr2 12227491 12227756 -241028827 - L2 LINE L2 -92 3180 2860 1160 307 132 11 chr2 12228142 12228611 -241027972 - MLT1G LTR MaLR -55 535 10 1302 270 81 41 chr2 12229677 12230244 -241026339 - MLT1G LTR MaLR 0 590 1 474 291 174 34 chr2 12230259 12230730 -241025853 - L2 LINE L2 -901 2413 1877 21 89 0 0 chr2 12230745 12230801 -241025782 + AT_rich Low_complexity Low_complexity 1 56 0 220 292 21 62 chr2 12231029 12231125 -241025458 + L2 LINE L2 1038 1129 -2185 353 316 76 0 chr2 12231151 12231309 -241025274 + L2 LINE L2 1256 1425 -1889 416 260 79 0 chr2 12232235 12232362 -241024221 + L2 LINE L2 3169 3305 -8 3233 155 38 2 chr2 12233048 12233622 -241022961 + LTR49 LTR ERV1 1 595 0 24 32 0 0 chr2 12233948 12233979 -241022604 + AT_rich Low_complexity Low_complexity 1 31 0 379 149 68 27 chr2 12234313 12234387 -241022196 - LTR29 LTR ERV1 -115 503 404 343 150 0 0 chr2 12235344 12235404 -241021179 - L1PA16 LINE L1 -10 6156 6097 29 28 0 0 chr2 12236555 12236591 -241019992 + AT_rich Low_complexity Low_complexity 1 36 0 536 207 174 117 chr2 12236778 12237170 -241019413 - LTR50 LTR ERVL -324 471 58 195 129 0 0 chr2 12237315 12237346 -241019237 + (A)n Simple_repeat Simple_repeat 1 31 0 696 277 51 45 chr2 12237691 12238027 -241018556 - L1MC4 LINE L1 -571 7471 7134 1842 196 92 37 chr2 12238027 12238482 -241018101 + MLT2B1 LTR ERVL 1 480 -40 491 85 51 40 chr2 12238510 12238687 -241017896 + (TA)n Simple_repeat Simple_repeat 2 180 0 258 122 52 26 chr2 12238699 12238814 -241017769 + (TA)n Simple_repeat Simple_repeat 2 119 0 268 163 0 0 chr2 12238814 12238863 -241017720 + MLT2B1 LTR ERVL 464 512 -8 360 273 37 12 chr2 12238884 12239045 -241017538 - L1MC4 LINE L1 -937 7105 6941 671 299 85 16 chr2 12239689 12240243 -241016340 - L1MC4 LINE L1 -977 6831 6277 1333 187 93 22 chr2 12240389 12240657 -241015926 + AluJb SINE Alu 3 289 -23 215 226 151 54 chr2 12240965 12241058 -241015525 + MIR SINE MIR 96 197 -65 402 270 68 75 chr2 12243053 12243346 -241013237 - MLT1I LTR MaLR -22 387 97 1269 227 14 50 chr2 12243358 12243719 -241012864 + MLT2C1 LTR ERVL 50 397 0 24 32 0 0 chr2 12243886 12243917 -241012666 + AT_rich Low_complexity Low_complexity 1 31 0 252 288 0 25 chr2 12243976 12244056 -241012527 - L1ME3A LINE L1 -73 6097 6020 183 271 186 25 chr2 12244337 12244455 -241012128 - MIR SINE MIR -30 232 96 192 125 0 0 chr2 12244888 12244920 -241011663 + (TC)n Simple_repeat Simple_repeat 1 32 0 189 196 0 0 chr2 12244919 12244965 -241011618 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 348 246 15 41 chr2 12245039 12245234 -241011349 - L1MC5 LINE L1 -271 7690 7501 564 267 0 0 chr2 12245248 12245379 -241011204 - MER3 DNA MER1_type -78 131 1 2000 104 0 0 chr2 12245449 12245728 -241010855 + L1PA8 LINE L1 5887 6165 -7 1777 255 35 50 chr2 12245825 12246565 -241010018 - L1MC4 LINE L1 -544 7498 6770 182 119 34 34 chr2 12247079 12247138 -241009445 + (TA)n Simple_repeat Simple_repeat 1 59 0 312 108 50 42 chr2 12247153 12247273 -241009310 + (TA)n Simple_repeat Simple_repeat 1 121 0 2089 62 0 0 chr2 12247331 12247604 -241008979 + AluY SINE Alu 39 311 0 352 316 64 32 chr2 12247885 12248072 -241008511 - HsTC2 DNA Tc2 -1007 891 699 308 328 138 11 chr2 12248098 12248287 -241008296 - L1ME1 LINE L1 -5 6161 5949 259 229 0 0 chr2 12248301 12248362 -241008221 - L1ME1 LINE L1 -272 5894 5834 2760 83 11 8 chr2 12248646 12249020 -241007563 + THE1C LTR MaLR 1 375 0 314 241 9 36 chr2 12249078 12249190 -241007393 + L1ME4a LINE L1 5741 5849 -272 368 266 84 0 chr2 12249211 12249365 -241007218 + L1ME4a LINE L1 5944 6110 -11 3865 44 0 0 chr2 12249818 12250297 -241006286 + L1P LINE L1 4742 5220 -926 31 0 0 0 chr2 12250726 12250757 -241005826 + AT_rich Low_complexity Low_complexity 1 31 0 4004 238 11 31 chr2 12251133 12252384 -241004199 - L1 LINE L1 -2979 3167 1937 1074 275 121 20 chr2 12252982 12253480 -241003103 - MLT1H LTR MaLR 0 549 2 2345 51 7 0 chr2 12253594 12253888 -241002695 + L1PA6 LINE L1 5847 6142 -12 294 146 18 0 chr2 12253927 12253982 -241002601 + MSTA LTR MaLR 373 428 0 1230 102 20 11 chr2 12254324 12254533 -241002050 + MLT2A2 LTR ERVL 293 453 0 1226 248 58 31 chr2 12254535 12254912 -241001671 - L1ME LINE L1 -3362 2718 2322 1734 167 27 46 chr2 12254912 12255284 -241001299 - MLT1A1 LTR MaLR 0 365 1 1226 248 58 31 chr2 12255284 12255419 -241001164 - L1ME LINE L1 -3758 2322 2192 657 153 0 0 chr2 12255421 12255519 -241001064 - Tigger3(Golem) DNA MER2_type -2 3027 2930 * 2919 158 55 8 chr2 12255510 12256021 -241000562 - Tigger3b DNA MER2_type -696 535 1 1855 274 77 80 chr2 12256030 12257217 -240999366 - L1ME LINE L1 -4052 2209 970 231 36 0 0 chr2 12257217 12257245 -240999338 + (TC)n Simple_repeat Simple_repeat 2 29 0 1855 274 77 80 chr2 12257245 12258208 -240998375 - L1ME LINE L1 -5291 970 6 292 348 100 24 chr2 12258334 12258713 -240997870 - L2 LINE L2 -641 2673 2266 212 167 0 0 chr2 12259893 12259929 -240996654 + (TATG)n Simple_repeat Simple_repeat 2 37 0 558 281 30 90 chr2 12259934 12260201 -240996382 - MIR SINE MIR -10 252 2 24 0 0 0 chr2 12260380 12260404 -240996179 + AT_rich Low_complexity Low_complexity 1 24 0 594 299 48 24 chr2 12260604 12261082 -240995501 + MLT1H1 LTR MaLR 1 587 -8 494 187 29 14 chr2 12261160 12261299 -240995284 - MER69 DNA AcHobo -9 2517 2377 1346 225 126 6 chr2 12261558 12261892 -240994691 + MLT1A2 LTR MaLR 1 374 0 351 276 11 0 chr2 12261969 12262056 -240994527 + GA-rich Low_complexity Low_complexity 3 90 0 1421 216 35 37 chr2 12262290 12262665 -240993918 - MLT1A2 LTR MaLR 0 374 1 225 159 0 0 chr2 12263256 12263300 -240993283 + GA-rich Low_complexity Low_complexity 1 44 0 1309 241 108 50 chr2 12263306 12264092 -240992491 - L1MEc LINE L1 -3961 3161 2330 941 75 37 8 chr2 12264092 12264226 -240992357 + MSTB1 LTR MaLR 295 432 0 481 313 69 41 chr2 12264229 12264549 -240992034 - L1MEc LINE L1 -5335 1088 760 955 257 89 60 chr2 12264721 12265191 -240991392 - L1MEc LINE L1 -5923 500 17 387 141 0 0 chr2 12265251 12265315 -240991268 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 245 245 80 88 chr2 12265369 12265588 -240990995 - MIR SINE MIR -2 260 77 233 313 46 61 chr2 12265664 12265795 -240990788 - MIR SINE MIR -58 150 22 22 56 0 0 chr2 12266023 12266059 -240990524 + AT_rich Low_complexity Low_complexity 1 36 0 242 243 43 29 chr2 12266628 12266698 -240989885 + MIR SINE MIR 60 130 -78 195 42 0 0 chr2 12266963 12266987 -240989596 + (TTA)n Simple_repeat Simple_repeat 1 24 0 513 274 59 41 chr2 12268243 12268462 -240988121 - MIR SINE MIR -27 235 13 1270 194 43 25 chr2 12269372 12269696 -240986887 - L1ME LINE L1 -368 5796 5467 2030 134 64 19 chr2 12269799 12270158 -240986425 + THE1C LTR MaLR 1 375 0 9768 121 31 38 chr2 12270158 12271749 -240984834 + THE1C-int LTR MaLR 1 1580 0 2111 129 64 14 chr2 12271751 12272108 -240984475 + THE1C LTR MaLR 1 375 0 480 291 92 5 chr2 12272185 12272381 -240984202 + MIR SINE MIR 37 249 -13 243 308 0 22 chr2 12272933 12273024 -240983559 + CT-rich Low_complexity Low_complexity 2 90 0 240 35 0 0 chr2 12273030 12273059 -240983524 + (CA)n Simple_repeat Simple_repeat 2 30 0 252 0 0 0 chr2 12273360 12273388 -240983195 + (GA)n Simple_repeat Simple_repeat 1 28 0 293 231 71 108 chr2 12273409 12273557 -240983026 + MIR SINE MIR 31 170 -92 207 0 0 0 chr2 12273557 12273580 -240983003 + (TATG)n Simple_repeat Simple_repeat 2 24 0 293 231 71 108 chr2 12273580 12273643 -240982940 + MIR SINE MIR 170 234 -28 1372 185 59 72 chr2 12273675 12274064 -240982519 + MLT1B LTR MaLR 3 386 -4 1449 127 5 0 chr2 12274337 12274556 -240982027 - MSTA LTR MaLR -10 418 199 1988 157 65 35 chr2 12274556 12275071 -240981512 - MLT2A2 LTR ERVL 0 554 3 1093 128 96 5 chr2 12275072 12275259 -240981324 - MSTA LTR MaLR -224 204 1 196 311 76 30 chr2 12275901 12276033 -240980550 + MIR SINE MIR 119 256 -6 231 217 35 35 chr2 12276132 12276197 -240980386 + MIR SINE MIR 86 143 -65 22 80 0 0 chr2 12276967 12277017 -240979566 + AT_rich Low_complexity Low_complexity 1 50 0 334 323 60 23 chr2 12277175 12277392 -240979191 + MLT1H LTR MaLR 84 308 -241 1699 204 64 3 chr2 12277542 12277886 -240978697 + MLT1A1 LTR MaLR 1 365 0 2481 84 3 3 chr2 12278661 12278994 -240977589 - L1PA8A LINE L1 -4 6127 5795 36883 41 24 2 chr2 12279312 12284609 -240971974 - L1PA3 LINE L1 -226 5929 513 2933 20 9 0 chr2 12284709 12285109 -240971474 + L1PA2 LINE L1 5808 6210 0 854 90 0 0 chr2 12285132 12285254 -240971329 + L1PA7 LINE L1 5814 5935 -219 2404 80 0 3 chr2 12285291 12285590 -240970993 - AluY SINE Alu -13 298 1 438 314 128 19 chr2 12285611 12285989 -240970594 - L1M4 LINE L1 -2153 3993 3577 504 72 0 0 chr2 12286354 12286423 -240970160 + (TC)n Simple_repeat Simple_repeat 1 69 0 344 369 118 27 chr2 12286887 12287535 -240969048 - L1MEd LINE L1 -744 1746 948 27 0 0 0 chr2 12288685 12288712 -240967871 + AT_rich Low_complexity Low_complexity 1 27 0 1371 233 76 35 chr2 12289401 12289941 -240966642 + HsTC2a DNA Tc2 145 706 -38 181 257 27 54 chr2 12290008 12290082 -240966501 - L2 LINE L2 -4 3268 3197 21 0 0 0 chr2 12290817 12290838 -240965745 + AT_rich Low_complexity Low_complexity 1 21 0 348 24 0 0 chr2 12291086 12291127 -240965456 + (CA)n Simple_repeat Simple_repeat 2 42 0 3288 54 14 0 chr2 12291259 12291704 -240964879 - L1P LINE L1 -5691 455 5 1235 56 0 0 chr2 12291704 12291866 -240964717 - L1PA7 LINE L1 -324 5830 5669 1483 104 0 9 chr2 12291866 12292082 -240964501 + L1PA7 LINE L1 5932 6151 -3 985 181 84 13 chr2 12292185 12292488 -240964095 + MER33 DNA MER1_type 1 318 -6 347 335 101 18 chr2 12292497 12292775 -240963808 + L1MC/D LINE L1 4133 4433 -1713 28 79 0 0 chr2 12292847 12292910 -240963673 + AT_rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr2 12293299 12293328 -240963255 + AT_rich Low_complexity Low_complexity 1 29 0 338 318 22 45 chr2 12293334 12293824 -240962759 + L1MC/D LINE L1 5037 5514 -650 257 326 0 101 chr2 12293843 12293981 -240962602 - MER5B DNA MER1_type -49 129 6 509 336 79 40 chr2 12294221 12294732 -240961851 + L1 LINE L1 3838 4379 -1767 2147 116 7 10 chr2 12294732 12295033 -240961550 - AluSx SINE Alu -12 300 1 509 336 79 40 chr2 12295033 12295143 -240961440 + L1 LINE L1 4379 4483 -1663 274 235 70 20 chr2 12296437 12296538 -240960045 + MIR SINE MIR 95 200 -58 806 292 132 37 chr2 12296898 12297353 -240959230 - L3 LINE CR1 -1 1576 1079 23 33 0 0 chr2 12298855 12298885 -240957698 + AT_rich Low_complexity Low_complexity 1 30 0 769 307 40 33 chr2 12299792 12300121 -240956462 - MLT1J2 LTR MaLR -118 332 2 56 16 0 0 chr2 12302603 12302666 -240953917 + AT_rich Low_complexity Low_complexity 1 63 0 377 317 8 16 chr2 12302714 12302837 -240953746 - MIR SINE MIR -66 142 21 476 204 186 66 chr2 12302905 12303072 -240953511 - MER5A DNA MER1_type -1 188 2 242 317 30 10 chr2 12304461 12304562 -240952021 - MIR SINE MIR -102 160 58 2362 108 0 0 chr2 12304968 12305274 -240951309 + AluSx SINE Alu 1 306 -6 186 400 50 0 chr2 12305571 12305691 -240950892 - MIR SINE MIR -90 172 47 252 0 0 0 chr2 12307072 12307100 -240949483 + (CA)n Simple_repeat Simple_repeat 1 28 0 295 323 173 27 chr2 12307182 12307442 -240949141 - L2 LINE L2 -42 3230 2933 433 147 0 13 chr2 12308270 12308345 -240948238 + L1M2 LINE L1 5691 5764 -548 21 36 0 0 chr2 12308498 12308526 -240948057 + AT_rich Low_complexity Low_complexity 1 28 0 320 339 95 23 chr2 12308930 12309151 -240947432 + MIR SINE MIR 5 241 -21 352 284 39 0 chr2 12310891 12310993 -240945590 + MIR SINE MIR 47 152 -110 334 141 125 0 chr2 12312269 12312333 -240944250 + LTR33A LTR ERVL 448 519 -4 323 229 8 38 chr2 12312455 12312586 -240943997 + (TA)n Simple_repeat Simple_repeat 1 127 0 292 302 117 45 chr2 12312632 12312854 -240943729 - L2 LINE L2 -452 2862 2625 2456 258 66 6 chr2 12313394 12314087 -240942496 + MER69 DNA AcHobo 1 735 -1791 1032 241 114 5 chr2 12314099 12314476 -240942107 + MER69 DNA AcHobo 1840 2257 -269 239 254 63 0 chr2 12314702 12314765 -240941818 - MIR SINE MIR 0 262 196 275 308 25 42 chr2 12314979 12315099 -240941484 + MIR SINE MIR 8 125 -137 271 368 85 46 chr2 12315404 12315733 -240940850 + L2 LINE L2 2832 3173 -99 2621 40 0 0 chr2 12315733 12316036 -240940547 - AluY SINE Alu -8 303 1 8722 107 11 1 chr2 12316290 12317558 -240939025 - HSMAR1 DNA Mariner -1 1286 6 792 257 103 24 chr2 12317706 12317959 -240938624 - MLT1B LTR MaLR -15 375 103 679 246 7 0 chr2 12317963 12318105 -240938478 + L1PB4 LINE L1 6013 6155 -1 563 136 117 29 chr2 12318112 12318215 -240938368 - MLT1B LTR MaLR -278 112 1 364 331 147 11 chr2 12319677 12319861 -240936722 + MIR SINE MIR 23 231 -31 353 356 47 5 chr2 12320188 12320379 -240936204 + MIR SINE MIR 32 230 -32 224 314 164 21 chr2 12320697 12320837 -240935746 + MIR SINE MIR 29 188 -74 4167 101 15 2 chr2 12321277 12321824 -240934759 - MER41A LTR ERV1 0 554 1 248 348 130 5 chr2 12321883 12322090 -240934493 + MLT1G1 LTR MaLR 1 233 -362 226 231 0 154 chr2 12322134 12322212 -240934371 + MLT1G1 LTR MaLR 202 267 -288 262 239 0 65 chr2 12322411 12322503 -240934080 + MLT1G LTR MaLR 468 588 -2 578 325 40 16 chr2 12322510 12322952 -240933631 + MLT1G-int LTR MaLR 6 575 -796 1577 216 7 69 chr2 12323533 12323913 -240932670 - L1P LINE L1 -715 5416 5071 2147 137 3 0 chr2 12323913 12324220 -240932363 - AluSx SINE Alu -4 308 1 1577 216 7 69 chr2 12324220 12324341 -240932242 - L1P LINE L1 -1060 5071 4944 757 214 46 31 chr2 12324522 12324718 -240931865 - L1 LINE L1 -1218 4928 4730 4526 177 39 32 chr2 12324734 12325650 -240930933 + L1MA10 LINE L1 5411 6333 -1 273 258 75 11 chr2 12326090 12326183 -240930400 + MLT1F LTR MaLR 52 150 -445 514 204 170 78 chr2 12326298 12326504 -240930079 + MLT1F LTR MaLR 331 555 0 180 0 0 0 chr2 12327312 12327332 -240929251 + (A)n Simple_repeat Simple_repeat 1 20 0 182 114 0 29 chr2 12327857 12327892 -240928691 + (GGAGAA)n Simple_repeat Simple_repeat 4 37 0 24 32 0 0 chr2 12328039 12328070 -240928513 + AT_rich Low_complexity Low_complexity 1 31 0 360 330 71 20 chr2 12328482 12328679 -240927904 + MIR SINE MIR 56 262 0 707 263 73 48 chr2 12328713 12329112 -240927471 + HAL1b LINE L1 374 782 -566 250 247 23 6 chr2 12330496 12330670 -240925913 + (TA)n Simple_repeat Simple_repeat 1 177 0 268 208 56 0 chr2 12331150 12331222 -240925361 + L1ME LINE L1 512 587 -5483 2774 202 32 10 chr2 12331410 12332004 -240924579 + L1MB7 LINE L1 5573 6179 -5 1994 97 7 29 chr2 12332224 12332502 -240924081 + AluY SINE Alu 27 298 -13 234 277 33 87 chr2 12332765 12332949 -240923634 + L1ME3A LINE L1 5067 5240 -906 421 261 81 6 chr2 12333217 12333378 -240923205 - L1M4 LINE L1 -2830 3316 3144 1772 89 0 8 chr2 12333378 12333613 -240922970 - AluY SINE Alu 0 311 79 2620 108 68 21 chr2 12333613 12334040 -240922543 + LTR7 LTR ERV1 1 447 -3 20497 92 6 29 chr2 12334043 12337109 -240919474 + HERVH LTR ERV1 1 2995 -4718 893 136 27 0 chr2 12337088 12337235 -240919348 + HERVH LTR ERV1 3140 3290 -4423 * 3460 112 4 2 chr2 12337225 12337726 -240918857 + HERVH LTR ERV1 3492 3993 -3720 3814 135 71 22 chr2 12337728 12338359 -240918224 + HERVH LTR ERV1 4488 5149 -2564 2420 111 54 25 chr2 12338360 12338941 -240917642 + HERVH LTR ERV1 5600 7713 0 2726 104 60 21 chr2 12338941 12339372 -240917211 + LTR7 LTR ERV1 1 448 -2 607 146 0 0 chr2 12339374 12339456 -240917127 - AluY SINE Alu -227 83 2 1372 272 62 85 chr2 12339534 12339827 -240916756 + L1ME3A LINE L1 5290 5588 -582 2154 106 0 0 chr2 12339827 12340131 -240916452 + AluSc SINE Alu 1 304 0 1372 272 62 85 chr2 12340131 12340732 -240915851 + L1ME3A LINE L1 5588 6160 -10 204 323 0 0 chr2 12342355 12342417 -240914166 + MIR SINE MIR 83 144 -64 217 192 20 25 chr2 12343519 12343724 -240912859 + (TA)n Simple_repeat Simple_repeat 1 203 0 999 233 147 8 chr2 12343727 12344038 -240912545 - MLT2B1 LTR ERVL -21 533 137 180 398 19 19 chr2 12344452 12344560 -240912023 + MIR SINE MIR 36 143 -65 24 0 0 0 chr2 12344612 12344636 -240911947 + AT_rich Low_complexity Low_complexity 1 24 0 7146 67 10 1 chr2 12344792 12345801 -240910782 + L1PA7 LINE L1 5025 6150 -4 322 332 133 5 chr2 12346039 12346227 -240910356 - MIR SINE MIR -10 252 42 2099 201 15 20 chr2 12346479 12346877 -240909706 - MSTD LTR MaLR 0 396 1 350 251 17 153 chr2 12347176 12347404 -240909179 + L1MDb LINE L1 1160 1152 -5152 6616 92 20 1 chr2 12347404 12348708 -240907875 + L1PA10 LINE L1 4834 6151 -17 350 251 17 153 chr2 12348708 12348959 -240907624 + L1MDb LINE L1 1151 1435 -4869 206 379 61 0 chr2 12350599 12350665 -240905918 + L2 LINE L2 3111 3180 -92 202 250 7 157 chr2 12351304 12351444 -240905139 + L2 LINE L2 3138 3256 -16 1052 291 14 36 chr2 12351785 12352143 -240904440 + MLT1J2 LTR MaLR 25 374 -76 183 362 53 0 chr2 12352729 12352823 -240903760 + L3 LINE CR1 1425 1523 -54 404 314 59 18 chr2 12352958 12353178 -240903405 + MIR SINE MIR 2 230 -32 928 211 6 0 chr2 12353398 12353554 -240903029 + FAM SINE Alu 1 157 -18 340 323 51 0 chr2 12353757 12353915 -240902668 - MIR SINE MIR -4 258 93 252 288 0 72 chr2 12354675 12354786 -240901797 + MIR SINE MIR 37 139 -69 191 325 125 42 chr2 12355378 12355498 -240901085 + MIR3 SINE MIR 1 130 -78 326 154 0 0 chr2 12355678 12355730 -240900853 - L1MB8 LINE L1 -10 6168 6117 2007 134 0 25 chr2 12357193 12357513 -240899070 + AluSx SINE Alu 1 312 0 439 209 12 12 chr2 12358356 12358442 -240898141 - MER81 DNA DNA 0 114 29 652 319 135 25 chr2 12358452 12358941 -240897642 + L2 LINE L2 2211 2753 -561 276 149 0 0 chr2 12359360 12359407 -240897176 + (TC)n Simple_repeat Simple_repeat 2 48 0 500 309 99 28 chr2 12359547 12359939 -240896644 - L1MC4 LINE L1 0 8042 7506 3029 81 39 3 chr2 12360192 12360600 -240895983 + MLT2A1 LTR ERVL 1 492 -23 319 154 39 10 chr2 12360600 12360704 -240895879 + (TA)n Simple_repeat Simple_repeat 1 107 0 300 189 35 6 chr2 12360708 12360790 -240895793 + MLT2A1 LTR ERVL 402 444 0 470 281 14 22 chr2 12360989 12361128 -240895455 + L2 LINE L2 3168 3305 -8 294 29 0 0 chr2 12362267 12362302 -240894281 + (TC)n Simple_repeat Simple_repeat 2 36 0 21 0 0 0 chr2 12362421 12362442 -240894141 + AT_rich Low_complexity Low_complexity 1 21 0 201 184 36 25 chr2 12362474 12362764 -240893819 + (TA)n Simple_repeat Simple_repeat 1 293 0 210 205 68 8 chr2 12362810 12362927 -240893656 + (TA)n Simple_repeat Simple_repeat 2 125 0 187 154 19 19 chr2 12362974 12363026 -240893557 + (TA)n Simple_repeat Simple_repeat 2 53 0 1264 228 115 32 chr2 12363079 12363426 -240893157 - MLT2B1 LTR ERVL -137 383 8 180 375 0 0 chr2 12363891 12363955 -240892628 + MIR SINE MIR 78 141 -67 3632 8 0 0 chr2 12364625 12365010 -240891573 - L1PA2 LINE L1 0 6155 5771 4570 20 0 0 chr2 12365010 12365650 -240890933 + L1PA2 LINE L1 5134 5773 -382 1571 209 38 79 chr2 12366070 12366577 -240890006 - L1MA10 LINE L1 -3 6331 5846 457 227 35 93 chr2 12366889 12367015 -240889568 + MER96B DNA MER1_type? 1 116 -301 1804 132 62 14 chr2 12367015 12367303 -240889280 + AluSx SINE Alu 1 302 -10 457 227 35 93 chr2 12367303 12367348 -240889235 + MER96B DNA MER1_type? 116 162 -255 194 330 68 48 chr2 12367813 12367916 -240888667 - L2 LINE L2 -14 3258 3154 206 323 86 21 chr2 12368954 12369047 -240887536 - L2 LINE L2 -32 3240 3142 261 119 0 0 chr2 12370186 12370228 -240886355 + (TTCC)n Simple_repeat Simple_repeat 4 45 0 1925 128 18 4 chr2 12370237 12370518 -240886065 + AluSx SINE Alu 27 311 -1 259 294 87 22 chr2 12370651 12370743 -240885840 - L2 LINE L2 -188 3084 2987 280 298 170 18 chr2 12371401 12371572 -240885011 - MIR SINE MIR 0 262 66 245 334 114 64 chr2 12372230 12372589 -240883994 + L2 LINE L2 2887 3263 -9 288 0 0 0 chr2 12372954 12372986 -240883597 + (TG)n Simple_repeat Simple_repeat 2 33 0 2070 210 56 94 chr2 12373388 12374099 -240882484 + Charlie1a DNA MER1_type 1 684 -771 615 134 4 195 chr2 12374119 12374316 -240882267 - Charlie1 DNA MER1_type -375 2386 2238 1953 112 0 100 chr2 12374316 12374647 -240881936 - AluSg SINE Alu -12 298 1 615 134 4 195 chr2 12374647 12374680 -240881903 - Charlie1 DNA MER1_type -523 2238 2200 1350 202 30 16 chr2 12374680 12375052 -240881531 + Charlie1 DNA MER1_type 2385 2761 0 484 312 50 45 chr2 12375382 12375584 -240880999 + MIR3 SINE MIR 1 203 -5 376 325 234 0 chr2 12375689 12375886 -240880697 + MIR SINE MIR 10 252 -10 504 333 73 0 chr2 12375903 12376053 -240880530 + L2 LINE L2 3112 3272 0 217 273 76 0 chr2 12376672 12376738 -240879845 - MIR SINE MIR -87 175 105 470 282 20 20 chr2 12377095 12377244 -240879339 - L2 LINE L2 0 3313 3165 21 0 0 0 chr2 12377574 12377595 -240878988 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 12377774 12377798 -240878785 + AT_rich Low_complexity Low_complexity 1 24 0 400 326 61 11 chr2 12377933 12378114 -240878469 - L1ME4a LINE L1 -195 5926 5737 22 56 0 0 chr2 12378160 12378196 -240878387 + AT_rich Low_complexity Low_complexity 1 36 0 261 0 0 0 chr2 12378295 12378324 -240878259 + (A)n Simple_repeat Simple_repeat 1 29 0 365 298 132 29 chr2 12378736 12378941 -240877642 - MIR SINE MIR 0 262 37 475 330 30 51 chr2 12379260 12379496 -240877087 + MIR SINE MIR 5 235 -27 32 57 0 0 chr2 12380495 12380548 -240876035 + AT_rich Low_complexity Low_complexity 1 53 0 868 244 113 41 chr2 12380925 12381042 -240875541 + L1ME1 LINE L1 2201 2308 -3838 2145 123 27 0 chr2 12381042 12381342 -240875241 + AluSg SINE Alu 1 308 -2 868 244 113 41 chr2 12381342 12381665 -240874918 + L1ME1 LINE L1 2308 2692 -3454 1493 116 0 22 chr2 12381665 12381890 -240874693 - AluSg/x SINE Alu -8 302 83 868 244 113 41 chr2 12381890 12382006 -240874577 + L1ME1 LINE L1 2692 2798 -3348 1711 173 15 64 chr2 12382006 12382411 -240874172 - MLT1B LTR MaLR 0 390 6 2815 275 76 52 chr2 12382422 12382630 -240873953 + L1ME1 LINE L1 2801 3002 -3144 2817 13 0 0 chr2 12382630 12382941 -240873642 + AluY SINE Alu 1 311 0 2815 275 76 52 chr2 12382941 12384930 -240871653 + L1ME1 LINE L1 3002 5081 -1065 2770 102 0 0 chr2 12384930 12385294 -240871289 + THE1B LTR MaLR 1 364 0 2815 275 76 52 chr2 12385294 12385525 -240871058 + L1ME1 LINE L1 5081 5305 -841 1940 148 3 25 chr2 12385527 12385845 -240870738 + AluJb SINE Alu 1 311 -1 1075 261 106 9 chr2 12385901 12386049 -240870534 + L1ME1 LINE L1 5323 5455 -904 261 0 0 0 chr2 12386049 12386078 -240870505 + (CA)n Simple_repeat Simple_repeat 2 30 0 1075 261 106 9 chr2 12386078 12386354 -240870229 + L1ME1 LINE L1 5455 5788 -571 1118 236 60 3 chr2 12386354 12386655 -240869928 - MLT1D LTR MaLR -187 318 1 999 241 14 81 chr2 12386656 12386814 -240869769 + L1ME1 LINE L1 5782 5904 -262 2128 131 10 0 chr2 12386814 12387112 -240869471 - AluSp SINE Alu -12 301 1 999 241 14 81 chr2 12387112 12387310 -240869273 + L1ME1 LINE L1 5904 6114 -52 205 171 0 53 chr2 12387404 12387480 -240869103 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 741 128 13 20 chr2 12387502 12387651 -240868932 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 234 358 57 0 chr2 12388322 12388445 -240868138 - MIR SINE MIR -21 241 112 191 313 72 0 chr2 12388459 12388542 -240868041 + MIR SINE MIR 99 187 -75 2358 130 22 0 chr2 12388571 12388926 -240867657 - THE1B LTR MaLR 0 364 2 1534 179 58 0 chr2 12389517 12389808 -240866775 + AluJo SINE Alu 1 308 -4 448 196 11 0 chr2 12389952 12390044 -240866539 - FLAM_C SINE Alu -3 140 48 693 73 0 0 chr2 12390098 12390194 -240866389 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1663 160 0 60 chr2 12390204 12390522 -240866061 + AluJo SINE Alu 14 312 0 190 54 27 27 chr2 12390522 12390559 -240866024 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 573 199 18 6 chr2 12390583 12390749 -240865834 + GA-rich Low_complexity Low_complexity 2 169 0 2337 50 0 3 chr2 12390781 12391099 -240865484 + AluY SINE Alu 1 317 0 384 152 0 0 chr2 12391443 12391509 -240865074 + (TG)n Simple_repeat Simple_repeat 2 67 0 1298 213 21 15 chr2 12391564 12391893 -240864690 + L1MD3 LINE L1 7665 7995 0 251 272 87 10 chr2 12392045 12392148 -240864435 - L1ME LINE L1 -485 6134 6024 291 298 29 39 chr2 12392659 12392763 -240863820 + MIR SINE MIR 40 142 -120 1504 284 154 34 chr2 12393109 12393979 -240862604 - L1M4c LINE L1 -2735 3909 2847 1588 156 107 26 chr2 12393979 12394155 -240862428 + THE1C LTR MaLR 1 161 -214 531 56 0 0 chr2 12394155 12394226 -240862357 + (TC)n Simple_repeat Simple_repeat 1 71 0 1588 156 107 26 chr2 12394226 12394396 -240862187 + THE1C LTR MaLR 161 375 0 1504 284 154 34 chr2 12394396 12394748 -240861835 - L1M4c LINE L1 -3797 2847 2539 326 274 75 0 chr2 12394766 12394872 -240861711 - L1M4c LINE L1 -4163 2483 2370 2988 240 73 28 chr2 12394890 12395015 -240861568 - L1M4c LINE L1 -4432 2393 2275 2434 65 0 16 chr2 12395015 12395325 -240861258 + AluY SINE Alu 1 305 -6 2988 240 73 28 chr2 12395325 12396682 -240859901 - L1M4c LINE L1 -4550 2275 684 1097 246 41 52 chr2 12396683 12397045 -240859538 - L1M4c LINE L1 -5937 605 248 1267 230 4 25 chr2 12397053 12397331 -240859252 - AluJb SINE Alu -7 305 34 4940 206 29 39 chr2 12397338 12398376 -240858207 + L1MC3 LINE L1 5716 6763 -1022 2267 93 0 10 chr2 12398376 12398678 -240857905 - AluSc SINE Alu -10 299 1 4940 206 29 39 chr2 12398678 12398806 -240857777 + L1MC3 LINE L1 6763 6891 -894 351 0 0 0 chr2 12398806 12398845 -240857738 + (CA)n Simple_repeat Simple_repeat 2 40 0 4940 206 29 39 chr2 12398845 12399044 -240857539 + L1MC3 LINE L1 6891 7068 -717 238 315 140 0 chr2 12400427 12400570 -240856013 - MIR SINE MIR -6 256 94 639 7 107 0 chr2 12401283 12401423 -240855160 + (TA)n Simple_repeat Simple_repeat 2 156 0 196 100 20 20 chr2 12401425 12401475 -240855108 + (TATAA)n Simple_repeat Simple_repeat 5 54 0 330 227 0 52 chr2 12401475 12401572 -240855011 + L1MC4 LINE L1 6612 6703 -1339 273 348 61 35 chr2 12401763 12401993 -240854590 - MIR SINE MIR -6 256 21 2284 77 3 29 chr2 12402752 12403063 -240853520 + AluY SINE Alu 9 311 0 1236 211 44 73 chr2 12403126 12403539 -240853044 - MLT2D LTR ERVL -13 401 1 210 71 0 0 chr2 12404184 12404212 -240852371 + (A)n Simple_repeat Simple_repeat 1 28 0 387 0 0 0 chr2 12404537 12404580 -240852003 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 12404855 12404885 -240851698 + (A)n Simple_repeat Simple_repeat 1 30 0 43 35 0 0 chr2 12406157 12406214 -240850369 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 12406268 12406289 -240850294 + AT_rich Low_complexity Low_complexity 1 21 0 211 244 0 39 chr2 12406301 12406379 -240850204 + (CATATA)n Simple_repeat Simple_repeat 5 79 0 244 374 30 0 chr2 12406483 12406582 -240850001 - L2 LINE L2 0 3272 3171 23 0 0 0 chr2 12407840 12407863 -240848720 + AT_rich Low_complexity Low_complexity 1 23 0 321 304 0 43 chr2 12407899 12408014 -240848569 - L2 LINE L2 -32 3281 3172 206 308 13 26 chr2 12408238 12408316 -240848267 - MER91A DNA MER1_type -111 85 9 302 376 38 11 chr2 12408397 12408583 -240848000 - L2 LINE L2 -281 3032 2842 182 325 38 0 chr2 12408786 12408866 -240847717 - MIR3 SINE MIR 0 208 126 218 284 0 26 chr2 12408874 12408990 -240847593 + (TA)n Simple_repeat Simple_repeat 2 114 0 3737 92 28 9 chr2 12409284 12409857 -240846726 - L1PB1 LINE L1 -158 5993 5410 910 140 0 0 chr2 12409859 12410009 -240846574 + L1PB1 LINE L1 6002 6151 0 1217 153 101 37 chr2 12410021 12410320 -240846263 - MLT1A1 LTR MaLR -39 357 9 2361 71 0 14 chr2 12410807 12411104 -240845479 - AluY SINE Alu -18 293 1 417 316 130 32 chr2 12411704 12412173 -240844410 + L1M3b LINE L1 629 1143 -5138 25 0 0 0 chr2 12412294 12412319 -240844264 + AT_rich Low_complexity Low_complexity 1 25 0 26 50 0 0 chr2 12412648 12412688 -240843895 + AT_rich Low_complexity Low_complexity 1 40 0 2074 112 14 17 chr2 12414078 12414372 -240842211 - AluSx SINE Alu -19 293 1 186 298 191 0 chr2 12414397 12414481 -240842102 - L2 LINE L2 -36 3236 3137 274 267 92 112 chr2 12414773 12414979 -240841604 - MLT1I LTR MaLR -1 408 207 1190 209 7 109 chr2 12415242 12415653 -240840930 - MLT1A2 LTR MaLR 0 374 6 350 372 39 13 chr2 12418034 12418265 -240838318 + MIR SINE MIR 9 245 -17 301 333 35 26 chr2 12418909 12419023 -240837560 - MIR SINE MIR -147 115 1 212 409 0 11 chr2 12419216 12419309 -240837274 + MER5A DNA MER1_type 74 165 -24 336 290 0 11 chr2 12419531 12419624 -240836959 - L1MC4 LINE L1 -1337 6705 6614 216 0 0 0 chr2 12419626 12419650 -240836933 + (GA)n Simple_repeat Simple_repeat 2 25 0 253 294 80 74 chr2 12419776 12420102 -240836481 - L1MC4 LINE L1 -1906 5902 5575 327 49 0 0 chr2 12420304 12420345 -240836238 + (CA)n Simple_repeat Simple_repeat 2 42 0 260 331 22 29 chr2 12420346 12420485 -240836098 + (CATG)n Simple_repeat Simple_repeat 2 139 0 23 33 0 0 chr2 12420516 12420546 -240836037 + AT_rich Low_complexity Low_complexity 1 30 0 870 305 29 34 chr2 12420727 12421078 -240835505 + L1MC4a LINE L1 5592 5940 -1868 221 202 22 22 chr2 12421116 12421205 -240835378 + (TA)n Simple_repeat Simple_repeat 2 90 0 233 302 0 0 chr2 12422054 12422117 -240834466 + T-rich Low_complexity Low_complexity 3 65 0 309 233 33 67 chr2 12423520 12423640 -240832943 + L1ME4a LINE L1 5937 6052 -69 255 301 15 30 chr2 12424592 12424725 -240831858 + L1ME4a LINE L1 5310 5440 -681 566 282 173 27 chr2 12424841 12425327 -240831256 + L1ME4a LINE L1 5546 6102 -19 1698 174 10 13 chr2 12425328 12425638 -240830945 + AluJo SINE Alu 3 311 -1 386 284 43 26 chr2 12425830 12425946 -240830637 - MIR3 SINE MIR -86 122 5 2328 63 6 44 chr2 12426131 12426447 -240830136 + AluY SINE Alu 1 304 -7 519 236 10 28 chr2 12426908 12427197 -240829386 + CT-rich Low_complexity Low_complexity 1 283 0 222 323 32 43 chr2 12427279 12427372 -240829211 + MIR SINE MIR 21 112 -150 192 277 0 62 chr2 12427376 12427441 -240829142 - L2 LINE L2 0 3272 3212 1068 252 91 31 chr2 12427704 12428057 -240828526 + HsTC2 DNA Tc2 1 374 -1524 588 210 93 25 chr2 12428054 12428216 -240828367 + HsTC2 DNA Tc2 1277 1625 -273 * 236 323 177 0 chr2 12428266 12428396 -240828187 + MIR SINE MIR 37 189 -73 366 335 61 12 chr2 12429381 12429545 -240827038 + MIR SINE MIR 35 206 -56 211 329 51 29 chr2 12429693 12429830 -240826753 + MIR3 SINE MIR 3 142 -66 486 0 0 0 chr2 12431524 12431578 -240825005 + (CA)n Simple_repeat Simple_repeat 2 55 0 26 0 0 0 chr2 12431761 12431787 -240824796 + AT_rich Low_complexity Low_complexity 1 26 0 204 340 38 28 chr2 12432221 12432327 -240824256 + MIR SINE MIR 66 172 -90 3096 151 2 11 chr2 12432913 12433384 -240823199 + MLT1C LTR MaLR 1 467 0 4628 171 53 10 chr2 12433583 12434375 -240822208 - LTR1B LTR ERV1 0 826 1 551 273 40 42 chr2 12434640 12434915 -240821668 + L2 LINE L2 2956 3291 -22 3552 39 0 2 chr2 12434926 12435332 -240821251 + L1PA4 LINE L1 5746 6150 -5 2399 90 3 0 chr2 12435707 12436017 -240820566 + AluSp SINE Alu 1 311 -2 988 212 0 10 chr2 12436043 12436236 -240820347 - MER3 DNA MER1_type 0 209 19 341 254 60 103 chr2 12436836 12437021 -240819562 - MLT1J1 LTR MaLR -28 418 242 230 253 177 0 chr2 12437068 12437147 -240819436 - MLT1J1 LTR MaLR -285 161 69 1489 204 20 67 chr2 12437807 12438165 -240818418 - MER58B DNA MER1_type 0 341 1 342 278 61 37 chr2 12438748 12438953 -240817630 - HAL1b LINE L1 0 6121 5922 1831 117 3 60 chr2 12438953 12439253 -240817330 - AluSq SINE Alu -19 294 12 342 278 61 37 chr2 12439253 12439391 -240817192 - HAL1b LINE L1 -199 5922 1242 332 301 87 0 chr2 12439429 12439532 -240817051 - L2 LINE L2 -5 3267 3156 265 349 54 8 chr2 12439535 12439664 -240816919 - L2 LINE L2 -25 3247 3113 186 348 58 0 chr2 12440412 12440481 -240816102 - L3 LINE CR1 -677 900 828 269 214 0 0 chr2 12441569 12441625 -240814958 - MLT2B2 LTR ERVL 0 520 465 271 263 0 42 chr2 12441633 12441728 -240814855 + L1MC4 LINE L1 6614 6704 -1338 1681 192 20 28 chr2 12441746 12442179 -240814404 - MLT2B2 LTR ERVL -40 480 8 579 279 62 0 chr2 12442229 12442390 -240814193 - MIR SINE MIR -15 247 77 652 221 99 9 chr2 12442390 12442668 -240813915 + LTR50 LTR ERVL 1 344 -451 888 224 100 17 chr2 12442699 12442989 -240813594 + LTR50 LTR ERVL 482 795 0 929 203 0 0 chr2 12443131 12443289 -240813294 - AluJb SINE Alu -23 289 132 705 276 24 0 chr2 12443600 12443770 -240812813 - MIR3 SINE MIR -4 204 31 730 212 6 17 chr2 12444006 12444185 -240812398 - MER96B DNA MER1_type? -238 179 3 225 333 27 13 chr2 12444406 12444481 -240812102 + MIR SINE MIR 13 88 -174 207 237 175 21 chr2 12444592 12444689 -240811894 + MIR SINE MIR 110 221 -41 1709 176 17 10 chr2 12445104 12445406 -240811177 + AluJo SINE Alu 1 304 -8 1554 276 78 26 chr2 12445490 12446050 -240810533 + MLT1E LTR MaLR 1 591 -2 791 106 29 0 chr2 12446054 12446158 -240810425 + U6 snRNA snRNA 1 107 0 3370 80 17 4 chr2 12446158 12446643 -240809940 + L1PA8A LINE L1 5227 5716 -415 756 113 0 0 chr2 12446750 12446865 -240809718 - L1PA7 LINE L1 -108 6046 5932 * 1324 56 0 0 chr2 12446859 12447021 -240809562 + L1PA7 LINE L1 5669 5830 -324 27814 39 38 3 chr2 12447021 12450444 -240806139 + L1P LINE L1 5 3549 -2597 1965 262 74 48 chr2 12450564 12451270 -240805313 + HERV16 LTR ERVL 733 1456 -3540 1635 303 43 28 chr2 12451450 12452120 -240804463 + HERV16 LTR ERVL 2220 2899 -2097 610 291 106 0 chr2 12452126 12452325 -240804258 - MLT1D LTR MaLR 0 505 286 814 274 21 60 chr2 12452339 12452770 -240803813 + HERV16 LTR ERVL 3011 3468 -2296 1225 318 84 13 chr2 12453900 12454592 -240801991 + HAL1 LINE L1 1523 2263 -244 1569 228 21 12 chr2 12456756 12457089 -240799494 + MER58B DNA MER1_type 5 340 -1 622 239 61 0 chr2 12457119 12457299 -240799284 - L1MC4a LINE L1 -1498 6310 6120 1506 105 5 0 chr2 12457300 12457519 -240799064 - MER6 DNA MER2_type -27 838 619 1353 230 129 24 chr2 12457608 12458134 -240798449 - MLT1E1 LTR MaLR 0 654 1 2004 268 37 16 chr2 12458320 12458828 -240797755 + LTR40a LTR ERVL 1 519 0 2777 191 25 36 chr2 12459003 12459553 -240797030 + MER44D DNA MER2_type 7 605 0 234 0 0 0 chr2 12460264 12460290 -240796293 + (TG)n Simple_repeat Simple_repeat 1 26 0 211 366 32 0 chr2 12460507 12460600 -240795983 + MIR3 SINE MIR 105 200 -8 2659 120 8 5 chr2 12462497 12462871 -240793712 - THE1C LTR MaLR 0 375 1 562 299 51 0 chr2 12463149 12463286 -240793297 - MER45A DNA AcHobo -1 177 34 216 294 35 24 chr2 12464217 12464302 -240792281 - MIR SINE MIR -97 165 80 319 294 31 69 chr2 12466023 12466183 -240790400 - MIR SINE MIR -96 166 13 515 239 28 57 chr2 12466629 12466805 -240789778 - MER5B DNA MER1_type -2 176 6 203 62 62 0 chr2 12468675 12468707 -240787876 - MIR SINE MIR -105 157 124 2171 125 0 0 chr2 12468864 12469159 -240787424 + AluSg SINE Alu 1 295 -15 2143 170 10 47 chr2 12469422 12469827 -240786756 + MLT1B LTR MaLR 1 390 0 243 214 205 68 chr2 12470139 12470228 -240786355 + MIR SINE MIR 124 234 -28 8435 142 15 10 chr2 12470228 12471521 -240785062 + HSMAR2 DNA Mariner 3 1301 -1 243 214 205 68 chr2 12471521 12471548 -240785035 + MIR SINE MIR 234 256 -6 1953 177 106 32 chr2 12471621 12471813 -240784770 - MLT1C LTR MaLR 0 467 291 2486 176 54 77 chr2 12471813 12472439 -240784144 + LTR9 LTR ERV1 1 612 0 1953 177 106 32 chr2 12472439 12472681 -240783902 - MLT1C LTR MaLR -176 291 1 650 230 20 20 chr2 12472855 12473007 -240783576 + MER5B DNA MER1_type 27 178 0 185 159 23 0 chr2 12473565 12473609 -240782974 + CT-rich Low_complexity Low_complexity 1 45 0 413 293 47 60 chr2 12473853 12474003 -240782580 - MIR3 SINE MIR -41 167 20 366 214 88 159 chr2 12474370 12474552 -240782031 - MER5B DNA MER1_type 0 178 21 218 339 123 12 chr2 12474635 12474886 -240781697 - L2 LINE L2 -792 2522 2244 262 375 69 7 chr2 12476078 12476222 -240780361 + MIR SINE MIR 38 190 -72 22 56 0 0 chr2 12477444 12477480 -240779103 + AT_rich Low_complexity Low_complexity 1 36 0 217 321 47 38 chr2 12477586 12477692 -240778891 + MIR SINE MIR 25 131 -77 310 305 83 49 chr2 12477796 12478121 -240778462 + MARNA DNA Mariner 43 378 -208 186 394 51 15 chr2 12478222 12478359 -240778224 - MIR SINE MIR -4 258 117 4440 235 91 102 chr2 12479000 12479928 -240776655 + L1ME1 LINE L1 52 989 -5407 2205 65 4 4 chr2 12479928 12480207 -240776376 + AluY SINE Alu 1 279 -32 4440 235 91 102 chr2 12480207 12480247 -240776336 + L1ME1 LINE L1 989 1028 -5368 704 103 43 9 chr2 12480247 12480363 -240776220 + AluSg/x SINE Alu 182 301 -8 4440 235 91 102 chr2 12480363 12481776 -240774807 + L1ME1 LINE L1 1028 2520 -3876 2924 241 67 22 chr2 12481774 12483436 -240773147 + L1ME1 LINE L1 4492 6215 -20 * 274 305 58 94 chr2 12484364 12484672 -240771911 - L2 LINE L2 -9 3263 2967 216 97 0 0 chr2 12484674 12484705 -240771878 + (A)n Simple_repeat Simple_repeat 1 31 0 2698 202 6 14 chr2 12484961 12485451 -240771132 - MER66B LTR ERV1 0 486 1 198 354 40 0 chr2 12486235 12486334 -240770249 + MIR SINE MIR 148 250 -12 24 0 0 0 chr2 12486585 12486609 -240769974 + AT_rich Low_complexity Low_complexity 1 24 0 2373 124 33 33 chr2 12486915 12487279 -240769304 - THE1B LTR MaLR 0 364 1 255 321 0 12 chr2 12487786 12487870 -240768713 - MIR SINE MIR -133 129 47 21 0 0 0 chr2 12487938 12487959 -240768624 + AT_rich Low_complexity Low_complexity 1 21 0 629 266 77 65 chr2 12488290 12488684 -240767899 + MLT1H LTR MaLR 16 421 -128 268 328 22 39 chr2 12489088 12489222 -240767361 + MIR SINE MIR 22 152 -64 499 271 28 44 chr2 12489711 12489892 -240766691 + HsTC2 DNA Tc2 1 178 -1720 355 203 10 173 chr2 12489894 12490096 -240766487 + HsTC2 DNA Tc2 1732 1900 0 382 304 102 42 chr2 12490608 12490989 -240765594 + LTR33A LTR ERVL 53 456 -67 297 328 33 16 chr2 12491372 12491494 -240765089 - MIR SINE MIR -76 186 63 2194 94 12 44 chr2 12491565 12491885 -240764698 + AluSx SINE Alu 1 310 -2 289 314 58 0 chr2 12492040 12492161 -240764422 + L2 LINE L2 3186 3313 0 260 287 8 74 chr2 12492250 12492372 -240764211 - L2 LINE L2 0 3272 3159 299 82 55 0 chr2 12492848 12492921 -240763662 + (TA)n Simple_repeat Simple_repeat 1 77 0 51 0 0 0 chr2 12492921 12492972 -240763611 + AT_rich Low_complexity Low_complexity 1 51 0 360 293 0 0 chr2 12493250 12493325 -240763258 - MIR SINE MIR -64 144 70 390 269 123 38 chr2 12494313 12494525 -240762058 + MIR SINE MIR 20 249 -13 1075 124 0 31 chr2 12494796 12494957 -240761626 - MER4E LTR ERV1 0 766 611 * 2176 104 16 7 chr2 12494952 12495261 -240761322 - MER4E LTR ERV1 -466 313 2 214 183 169 42 chr2 12495284 12495355 -240761228 - MIR SINE MIR -136 126 47 360 0 0 0 chr2 12496285 12496325 -240760258 + (TG)n Simple_repeat Simple_repeat 2 41 0 351 257 26 10 chr2 12496374 12496493 -240760090 + MIR SINE MIR 28 149 -59 940 208 33 9 chr2 12496499 12496711 -240759872 + LTR8A LTR ERV1 1 217 -510 3632 62 0 7 chr2 12496711 12497162 -240759421 + LTR7 LTR ERV1 1 448 -2 20488 88 59 50 chr2 12497164 12500426 -240756157 + HERVH LTR ERV1 1 3290 -4423 3308 124 8 6 chr2 12500416 12500917 -240755666 + HERVH LTR ERV1 3492 3993 -3720 * 4242 153 3 1 chr2 12500919 12501580 -240755003 + HERVH LTR ERV1 4488 5149 -2564 1389 134 18 5 chr2 12501581 12501798 -240754785 + HERVH LTR ERV1 5600 5819 -1894 * 2696 58 45 13 chr2 12501796 12502176 -240754407 + HERVH LTR ERV1 7322 7713 0 3567 59 0 22 chr2 12502176 12502634 -240753949 + LTR7 LTR ERV1 1 448 -2 1800 178 100 57 chr2 12502644 12503134 -240753449 + LTR8A LTR ERV1 214 724 -3 4464 101 0 0 chr2 12503489 12504043 -240752540 - MER41A LTR ERV1 0 554 1 2278 95 10 0 chr2 12505590 12505884 -240750699 + AluSc SINE Alu 1 297 -12 207 277 114 72 chr2 12507717 12507883 -240748700 - MIR SINE MIR -71 191 19 1768 127 0 16 chr2 12507990 12508242 -240748341 - AluSx SINE Alu -16 296 49 312 337 95 12 chr2 12508314 12508483 -240748100 + MIR3 SINE MIR 22 204 -4 2039 114 0 36 chr2 12508898 12509206 -240747377 - AluSx SINE Alu -13 299 3 240 250 88 38 chr2 12509647 12509727 -240746856 - L2 LINE L2 -51 3262 3179 546 313 109 37 chr2 12509822 12510116 -240746467 - MLT1I LTR MaLR -13 396 82 294 251 64 22 chr2 12510890 12511006 -240745577 + MIR SINE MIR 29 153 -55 242 175 0 0 chr2 12511050 12511090 -240745493 - MLT2D LTR ERVL -8 389 350 207 294 0 0 chr2 12511090 12511141 -240745442 + (TATG)n Simple_repeat Simple_repeat 3 53 0 1632 198 24 45 chr2 12511158 12511532 -240745051 - MLT2D LTR ERVL -48 366 1 215 208 42 0 chr2 12511532 12511580 -240745003 + GA-rich Low_complexity Low_complexity 1 50 0 1825 143 0 0 chr2 12512549 12512815 -240743768 + AluSx SINE Alu 1 266 -46 2465 124 31 6 chr2 12514226 12514580 -240742003 - THE1B LTR MaLR 0 364 2 29 47 0 0 chr2 12516042 12516085 -240740498 + AT_rich Low_complexity Low_complexity 1 43 0 206 185 46 46 chr2 12516230 12516295 -240740288 + MIR3 SINE MIR 99 163 -45 2423 119 73 14 chr2 12516601 12516945 -240739638 - THE1B LTR MaLR 0 364 1 261 230 92 35 chr2 12517323 12517410 -240739173 - L2 LINE L2 -27 3245 3154 261 380 72 6 chr2 12517890 12518056 -240738527 + MIR SINE MIR 57 233 -29 350 321 80 0 chr2 12518884 12519021 -240737562 + L2 LINE L2 3109 3256 -16 198 260 20 20 chr2 12519043 12519093 -240737490 - L2 LINE L2 -14 3258 3209 534 317 28 36 chr2 12519602 12519965 -240736618 - LTR16B LTR ERVL 0 464 105 339 262 6 81 chr2 12520637 12520809 -240735774 + L2 LINE L2 3155 3313 0 304 281 70 31 chr2 12520849 12520977 -240735606 - MIR3 SINE MIR -61 147 15 299 302 0 0 chr2 12521098 12521184 -240735399 - MIR SINE MIR -70 192 107 383 245 65 19 chr2 12521234 12521389 -240735194 + L2 LINE L2 2942 3103 -210 2288 86 7 13 chr2 12521587 12521890 -240734693 - AluSg SINE Alu 0 310 10 402 333 82 0 chr2 12522031 12522214 -240734369 - L3b LINE CR1 -98 1485 1288 263 331 76 16 chr2 12522324 12522491 -240734092 + MIR SINE MIR 3 182 -74 1447 181 60 11 chr2 12522557 12522662 -240733921 + AluJo SINE Alu 11 109 -203 294 29 0 0 chr2 12522662 12522697 -240733886 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1447 181 60 11 chr2 12522697 12522873 -240733710 + AluJo SINE Alu 109 306 -6 272 188 153 24 chr2 12523492 12523577 -240733006 - MIR SINE MIR -67 141 46 * 527 274 90 30 chr2 12523560 12523761 -240732822 + MIR SINE MIR 50 262 0 288 278 135 32 chr2 12523769 12523895 -240732688 - MIR3 SINE MIR -62 146 8 1979 159 3 0 chr2 12523929 12524238 -240732345 + AluJb SINE Alu 3 312 0 197 337 70 12 chr2 12524265 12524351 -240732232 - MIR3 SINE MIR -15 193 103 243 310 10 40 chr2 12524372 12524472 -240732111 + MER5A DNA MER1_type 47 143 -46 24 67 0 0 chr2 12524739 12524784 -240731799 + AT_rich Low_complexity Low_complexity 1 45 0 272 240 52 21 chr2 12524786 12524882 -240731701 - Charlie7 DNA MER1_type -2511 101 3 2244 124 3 0 chr2 12525366 12525673 -240730910 + AluSx SINE Alu 1 308 -4 296 269 19 46 chr2 12526026 12526134 -240730449 + MIR SINE MIR 85 189 -73 477 339 75 54 chr2 12526392 12526681 -240729902 - L2 LINE L2 -5 3267 2966 2048 128 3 0 chr2 12526681 12526978 -240729605 + AluSg SINE Alu 1 298 -12 477 339 75 54 chr2 12526978 12527077 -240729506 - L2 LINE L2 -306 2966 2871 301 272 25 0 chr2 12527104 12527185 -240729398 - L2 LINE L2 -546 2768 2686 289 262 166 28 chr2 12527225 12527370 -240729213 - MER5B DNA MER1_type 0 178 14 659 234 28 41 chr2 12527574 12527792 -240728791 + MLT1C LTR MaLR 253 467 0 204 125 0 0 chr2 12528348 12528380 -240728203 + (GA)n Simple_repeat Simple_repeat 2 33 0 270 306 0 0 chr2 12528380 12528465 -240728118 + (TG)n Simple_repeat Simple_repeat 2 86 0 528 365 25 8 chr2 12528635 12528879 -240727704 + MIR SINE MIR 1 248 -14 313 289 105 59 chr2 12529690 12529842 -240726741 - MIR SINE MIR -70 192 34 458 338 40 22 chr2 12530056 12530281 -240726302 - L3 LINE CR1 -372 1205 977 207 0 0 0 chr2 12530434 12530457 -240726126 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1678 145 8 4 chr2 12530460 12530715 -240725868 - AluSx SINE Alu -31 281 26 303 245 53 16 chr2 12531212 12531329 -240725254 + MIR SINE MIR 3 129 -79 1120 236 190 44 chr2 12531584 12532020 -240724563 + MLT1D LTR MaLR 1 500 -5 305 311 10 0 chr2 12532054 12532138 -240724445 - MIR SINE MIR -78 130 42 233 382 29 15 chr2 12532532 12532668 -240723915 + MIR3 SINE MIR 45 182 -26 236 333 13 0 chr2 12533360 12533435 -240723148 - MIR SINE MIR -68 140 65 24 32 0 0 chr2 12533552 12533583 -240723000 + AT_rich Low_complexity Low_complexity 1 31 0 229 336 148 0 chr2 12534215 12534337 -240722246 - MIR3 SINE MIR -5 203 64 2051 139 37 6 chr2 12536412 12536764 -240719819 - L1MD1 LINE L1 0 6242 5880 252 269 19 10 chr2 12536765 12536869 -240719714 - L1M4 LINE L1 -1778 4368 4264 996 199 26 26 chr2 12536916 12537147 -240719436 - L1M4 LINE L1 -1888 4258 4028 215 352 46 19 chr2 12537488 12537596 -240718987 - MIR SINE MIR -71 191 81 195 289 0 0 chr2 12537694 12537746 -240718837 - L2 LINE L2 -6 3266 3215 221 340 130 0 chr2 12537790 12537890 -240718693 + L2 LINE L2 3158 3270 -2 345 325 94 23 chr2 12538031 12538251 -240718332 + MIR SINE MIR 19 248 -14 1693 171 7 21 chr2 12538261 12538548 -240718035 + AluJo SINE Alu 1 283 -29 21 0 0 0 chr2 12539834 12539855 -240716728 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 12539866 12539887 -240716696 + AT_rich Low_complexity Low_complexity 1 21 0 183 293 36 71 chr2 12540063 12540203 -240716380 - L2 LINE L2 0 3272 3138 360 219 61 0 chr2 12540902 12540984 -240715599 - MER94 DNA DNA -47 87 1 242 146 36 18 chr2 12541510 12541565 -240715018 - MER5A DNA MER1_type -61 128 73 297 220 65 113 chr2 12542042 12542228 -240714355 - MIR SINE MIR -16 246 70 417 95 0 0 chr2 12542513 12542576 -240714007 + (TG)n Simple_repeat Simple_repeat 1 63 0 414 0 0 0 chr2 12542586 12542632 -240713951 + (TA)n Simple_repeat Simple_repeat 1 46 0 227 374 17 84 chr2 12542641 12542820 -240713763 + L2 LINE L2 3102 3268 -4 180 0 0 0 chr2 12542830 12542850 -240713733 + (GA)n Simple_repeat Simple_repeat 1 20 0 244 288 225 9 chr2 12544387 12544498 -240712085 + MIR SINE MIR 47 181 -81 607 279 42 42 chr2 12545132 12545369 -240711214 + MIR SINE MIR 13 249 -13 814 251 82 32 chr2 12546621 12546900 -240709683 + L2 LINE L2 3020 3312 -1 459 194 0 0 chr2 12546904 12547007 -240709576 + GA-rich Low_complexity Low_complexity 2 104 0 564 275 25 50 chr2 12547292 12547492 -240709091 - MIR SINE MIR -16 246 52 231 340 81 18 chr2 12547499 12547679 -240708904 + MIR SINE MIR 20 211 -51 279 317 132 92 chr2 12548028 12548353 -240708230 + L2 LINE L2 2920 3257 -15 213 191 24 0 chr2 12549508 12549550 -240707033 - L2 LINE L2 -14 3258 3216 316 296 42 136 chr2 12549642 12549950 -240706633 + L2 LINE L2 2957 3235 -37 239 318 42 48 chr2 12549965 12550154 -240706429 - MLT1J2 LTR MaLR 0 450 263 2442 113 48 22 chr2 12550499 12550854 -240705729 - THE1B LTR MaLR 0 364 1 2311 90 20 0 chr2 12551608 12551907 -240704676 - AluSc SINE Alu -3 306 2 516 300 171 19 chr2 12552000 12552310 -240704273 - L2 LINE L2 -364 2950 2594 215 253 0 11 chr2 12552859 12552950 -240703633 + GA-rich Low_complexity Low_complexity 4 93 0 250 242 67 107 chr2 12553114 12553292 -240703291 + LTR33A LTR ERVL 25 195 -328 466 259 36 7 chr2 12553377 12553516 -240703067 + LTR33A LTR ERVL 365 507 -16 255 300 48 88 chr2 12554558 12554785 -240701798 + L2 LINE L2 2967 3184 -88 191 35 0 35 chr2 12555054 12555083 -240701500 + (TCC)n Simple_repeat Simple_repeat 3 30 0 302 299 57 38 chr2 12555339 12555496 -240701087 + MIR SINE MIR 47 206 -56 2148 182 26 19 chr2 12555556 12555974 -240700609 + MLT1C LTR MaLR 21 441 -26 337 247 34 45 chr2 12556245 12556334 -240700249 - MER5B DNA MER1_type -73 105 18 201 93 56 56 chr2 12556768 12556822 -240699761 + A-rich Low_complexity Low_complexity 4 57 0 275 295 151 76 chr2 12556957 12557327 -240699256 + L2 LINE L2 2875 3272 0 2262 89 89 0 chr2 12558059 12558383 -240698200 - MER4C LTR ERV1 -5 460 108 537 298 57 24 chr2 12559426 12559674 -240696909 + MIR SINE MIR 2 257 -5 4385 162 47 10 chr2 12560213 12561640 -240694943 + L1MA6 LINE L1 4640 6120 -180 461 226 220 21 chr2 12561697 12561883 -240694700 + MIR SINE MIR 24 246 -16 1000 237 86 4 chr2 12562324 12562581 -240694002 - MLT1C LTR MaLR 0 467 190 1114 158 11 0 chr2 12562581 12562765 -240693818 - MLT1-int LTR MaLR -1185 186 1 1712 154 30 129 chr2 12562765 12562805 -240693778 - MLT2C1 LTR ERVL 0 397 355 351 0 0 0 chr2 12562805 12562844 -240693739 + (TG)n Simple_repeat Simple_repeat 1 39 0 1712 154 30 129 chr2 12562844 12563004 -240693579 - MLT2C1 LTR ERVL -42 355 181 2527 78 0 3 chr2 12563004 12563311 -240693272 - AluY SINE Alu -5 306 1 1712 154 30 129 chr2 12563311 12563550 -240693033 - MLT2C1 LTR ERVL -216 181 1 196 314 71 0 chr2 12563631 12563701 -240692882 + MIR3 SINE MIR 125 199 -9 349 311 122 6 chr2 12564389 12564569 -240692014 + MIR SINE MIR 7 207 -55 419 243 103 76 chr2 12564666 12564942 -240691641 + MLT1H LTR MaLR 1 314 -235 237 295 51 0 chr2 12565002 12565080 -240691503 + MLT1H LTR MaLR 454 535 -14 288 0 0 0 chr2 12566591 12566623 -240689960 + (TG)n Simple_repeat Simple_repeat 2 33 0 364 228 80 68 chr2 12566817 12566979 -240689604 - MER114 LTR ERV -27 621 458 680 250 60 5 chr2 12566992 12567208 -240689375 - MER114 LTR ERV -420 228 1 375 333 100 9 chr2 12568859 12569069 -240687514 - MIR SINE MIR -32 230 2 202 261 0 0 chr2 12569603 12569649 -240686934 - L2 LINE L2 -5 3267 3222 283 145 0 53 chr2 12569756 12569832 -240686751 + (GGAGAA)n Simple_repeat Simple_repeat 5 76 0 218 179 18 0 chr2 12570104 12570160 -240686423 + (TGAA)n Simple_repeat Simple_repeat 1 57 0 382 263 104 45 chr2 12570434 12570655 -240685928 - MLT1L LTR MaLR -206 409 73 263 316 188 0 chr2 12571100 12571233 -240685350 - MIR SINE MIR -19 243 86 189 350 58 29 chr2 12571714 12571817 -240684766 - L2 LINE L2 -8 3264 3159 729 273 95 71 chr2 12571912 12572418 -240684165 + LTR33 LTR ERVL 1 518 -3 296 257 155 20 chr2 12572419 12572567 -240684016 - MIR3 SINE MIR -15 193 26 180 259 111 0 chr2 12573556 12573610 -240682973 + MIR SINE MIR 88 147 -61 761 306 52 33 chr2 12574189 12574689 -240681894 - MLT1H1 LTR MaLR -13 536 1 281 254 0 0 chr2 12574837 12574892 -240681691 + L2 LINE L2 3236 3290 -23 281 318 23 0 chr2 12575284 12575372 -240681211 - L2 LINE L2 0 3272 3183 1518 207 83 115 chr2 12575632 12576066 -240680517 + MLT1E LTR MaLR 148 593 0 217 292 124 68 chr2 12576277 12576438 -240680145 + L2 LINE L2 2866 3035 -237 261 128 0 0 chr2 12576482 12576529 -240680054 + (TA)n Simple_repeat Simple_repeat 2 48 0 338 260 70 10 chr2 12576529 12576629 -240679954 - L1MC4 LINE L1 -1323 6719 6614 * 398 194 0 82 chr2 12576554 12576652 -240679931 + L1MC4 LINE L1 6614 6703 -1339 345 198 27 90 chr2 12576659 12576752 -240679831 + L1MC4 LINE L1 6613 6699 -1343 471 113 0 0 chr2 12576752 12576823 -240679760 + (CA)n Simple_repeat Simple_repeat 2 72 0 345 198 27 90 chr2 12576823 12576840 -240679743 + L1MC4 LINE L1 6699 6716 -1326 1454 198 52 38 chr2 12577058 12577426 -240679157 + MLT1B LTR MaLR 1 373 -17 1333 133 90 0 chr2 12577515 12577726 -240678857 + MER30 DNA MER1_type 1 230 0 210 316 61 44 chr2 12577781 12577895 -240678688 + MIR SINE MIR 97 212 -50 880 220 24 24 chr2 12577965 12578215 -240678368 - MER96B DNA MER1_type? -167 250 1 235 220 34 0 chr2 12578769 12578811 -240677772 + GA-rich Low_complexity Low_complexity 4 50 -14 1972 201 49 82 chr2 12578811 12579383 -240677200 - MLT2B3 LTR ERVL -1 553 1 235 220 34 0 chr2 12579383 12579399 -240677184 + GA-rich Low_complexity Low_complexity 50 64 0 454 308 63 0 chr2 12579475 12579634 -240676949 - MIR SINE MIR -49 213 45 250 310 70 51 chr2 12580380 12580538 -240676045 + MIR SINE MIR 76 236 -26 231 305 78 35 chr2 12580742 12580883 -240675700 - MIR SINE MIR -95 167 21 206 216 0 0 chr2 12581314 12581351 -240675232 + (CAAG)n Simple_repeat Simple_repeat 2 38 0 534 172 0 0 chr2 12581844 12581943 -240674640 + (CA)n Simple_repeat Simple_repeat 2 100 0 312 231 130 19 chr2 12581954 12582062 -240674521 + MIR SINE MIR 69 188 -74 2027 163 28 0 chr2 12583024 12583379 -240673204 + MLT1A1 LTR MaLR 1 365 0 210 260 135 31 chr2 12583381 12583477 -240673106 + MER91C DNA MER1_type 31 136 -4 224 306 16 0 chr2 12583659 12583721 -240672862 + L2 LINE L2 3209 3271 -1 2212 96 0 0 chr2 12584073 12584365 -240672218 - AluSc SINE Alu -17 292 1 274 398 128 0 chr2 12584365 12584576 -240672007 - MIR SINE MIR -18 244 7 317 253 121 0 chr2 12585159 12585250 -240671333 + L2 LINE L2 3200 3301 -12 408 313 53 65 chr2 12585270 12585516 -240671067 + L2 LINE L2 3022 3264 -8 280 296 25 75 chr2 12585521 12585688 -240670895 - MIR SINE MIR -60 148 32 257 167 49 108 chr2 12586026 12586128 -240670455 - MER94 DNA DNA -25 109 14 23 0 0 0 chr2 12587025 12587048 -240669535 + GC_rich Low_complexity Low_complexity 1 23 0 252 143 13 78 chr2 12587203 12587280 -240669303 + G-rich Low_complexity Low_complexity 2 73 0 306 346 31 8 chr2 12592397 12592524 -240664059 - MIR3 SINE MIR -49 159 30 335 271 122 0 chr2 12593023 12593130 -240663453 + MIR3 SINE MIR 40 159 -49 470 292 49 7 chr2 12593358 12593502 -240663081 - MIR SINE MIR -50 212 63 328 268 85 37 chr2 12594501 12594665 -240661918 - L2 LINE L2 -208 3064 2893 181 344 42 21 chr2 12596286 12596382 -240660201 - MIR3 SINE MIR -34 174 77 383 313 112 1 chr2 12597483 12597627 -240658956 + MIR SINE MIR 46 197 -65 504 259 127 25 chr2 12598441 12598638 -240657945 + MIR SINE MIR 34 250 -12 215 320 27 13 chr2 12600262 12600337 -240656246 + MIR SINE MIR 187 262 0 575 254 46 8 chr2 12600395 12600525 -240656058 - L2 LINE L2 -2 3311 3177 471 269 174 6 chr2 12600589 12600756 -240655827 - MIR SINE MIR -62 200 6 181 0 33 33 chr2 12600972 12601002 -240655581 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 342 250 90 10 chr2 12601372 12601472 -240655111 - L2 LINE L2 -2 3311 3204 231 349 132 9 chr2 12601938 12602044 -240654539 - MIR3 SINE MIR -52 156 38 536 253 8 20 chr2 12603491 12603645 -240652938 + MIR SINE MIR 22 150 -58 251 294 88 67 chr2 12603804 12604042 -240652541 + MIR SINE MIR 20 262 0 232 297 33 22 chr2 12604096 12604187 -240652396 - MIR3 SINE MIR -6 202 111 207 296 20 10 chr2 12604733 12604831 -240651752 - L2 LINE L2 -297 3016 2918 232 360 9 26 chr2 12605025 12605139 -240651444 + L2 LINE L2 3154 3265 -7 196 273 47 47 chr2 12605358 12605486 -240651097 - MIR SINE MIR -61 147 20 216 321 56 37 chr2 12605876 12606038 -240650545 + MIR SINE MIR 69 233 -29 240 328 0 0 chr2 12607032 12607090 -240649493 - L2 LINE L2 -23 3290 3233 359 299 19 116 chr2 12608076 12608131 -240648452 - MIR3 SINE MIR -2 206 147 551 124 21 10 chr2 12608131 12608228 -240648355 + L1MB3 LINE L1 6076 6173 -10 359 299 19 116 chr2 12608228 12608379 -240648204 - MIR3 SINE MIR -61 147 20 1875 124 53 0 chr2 12609637 12609919 -240646664 - AluSg SINE Alu -13 297 1 428 283 72 33 chr2 12610035 12610215 -240646368 + MIR SINE MIR 4 190 -72 207 247 148 62 chr2 12610313 12610394 -240646189 + MIR SINE MIR 46 133 -129 400 245 35 84 chr2 12610438 12610581 -240646002 + L2 LINE L2 3134 3269 -3 318 294 96 40 chr2 12613299 12613476 -240643107 - MIR SINE MIR -69 193 7 184 289 65 99 chr2 12613814 12614046 -240642537 - L2 LINE L2 -125 3147 2924 241 229 21 0 chr2 12614246 12614294 -240642289 + L2 LINE L2 3212 3260 -12 1809 202 19 22 chr2 12615145 12615511 -240641072 + MLT1A1 LTR MaLR 1 365 0 183 333 51 0 chr2 12615526 12615604 -240640979 - MIR3 SINE MIR -45 163 82 323 341 66 0 chr2 12616125 12616276 -240640307 - MIR SINE MIR -68 140 34 1546 210 16 25 chr2 12616582 12616948 -240639635 - MLT1A1 LTR MaLR -2 363 1 476 264 16 24 chr2 12616965 12617090 -240639493 + MIR SINE MIR 19 142 -66 313 118 39 0 chr2 12617639 12617690 -240638893 + MLT1C LTR MaLR 1 53 -414 852 129 14 7 chr2 12617694 12617833 -240638750 - MLT1A1 LTR MaLR -225 140 1 248 329 13 13 chr2 12617850 12617926 -240638657 + MIR SINE MIR 19 94 -114 1500 218 62 14 chr2 12617932 12618286 -240638297 + MLT1C LTR MaLR 66 436 -31 315 270 30 10 chr2 12619031 12619131 -240637452 - L1MA10 LINE L1 -7 6327 6226 * 554 271 92 5 chr2 12619124 12619281 -240637302 - L1M4 LINE L1 -1818 4397 4214 189 0 0 0 chr2 12619281 12619302 -240637281 + (TTA)n Simple_repeat Simple_repeat 2 22 0 554 271 92 5 chr2 12619302 12619362 -240637221 - L1M4 LINE L1 -2001 4214 4161 2252 233 56 26 chr2 12619367 12620298 -240636285 - L1MEc LINE L1 -3540 2675 1765 3036 301 45 27 chr2 12620404 12621586 -240634997 - ERVL LTR ERVL -2129 2867 1665 767 313 39 58 chr2 12621593 12622056 -240634527 - ERVL LTR ERVL -3520 1476 1023 1423 226 52 75 chr2 12622065 12622570 -240634013 - MLT1D LTR MaLR 0 505 13 1999 148 42 36 chr2 12622754 12623111 -240633472 + MER47A DNA MER2_type 1 359 -7 482 309 18 6 chr2 12623150 12623315 -240633268 - ERVL LTR ERVL -3720 2044 1878 342 68 0 0 chr2 12623438 12623482 -240633101 - MADE1 DNA Mariner 0 80 37 398 333 69 32 chr2 12623490 12623736 -240632847 - ERVL LTR ERVL -4327 669 415 1215 209 146 16 chr2 12623745 12624060 -240632523 + MLT1A1 LTR MaLR 10 365 0 255 277 12 24 chr2 12625655 12625738 -240630845 - MIR3 SINE MIR -27 181 100 218 232 49 37 chr2 12625800 12625882 -240630701 + L2 LINE L2 3189 3271 -1 211 355 69 28 chr2 12626920 12627078 -240629505 + MIR3 SINE MIR 3 164 -66 201 143 0 29 chr2 12627699 12627734 -240628849 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 281 359 114 40 chr2 12627755 12628106 -240628477 - L2 LINE L2 -3 3269 2893 1784 160 21 30 chr2 12628893 12629230 -240627353 + MLT1A1 LTR MaLR 32 365 0 437 311 15 7 chr2 12629232 12629367 -240627216 + MIR SINE MIR 16 151 -111 531 257 66 7 chr2 12629955 12630107 -240626476 - MIR3 SINE MIR -12 196 36 306 289 11 67 chr2 12630337 12630427 -240626156 - L2 LINE L2 -42 3230 3146 517 315 65 53 chr2 12630683 12631004 -240625579 - MLT1K LTR MaLR -126 462 138 242 371 13 38 chr2 12631989 12632148 -240624435 + MIR3 SINE MIR 33 187 -21 222 279 82 40 chr2 12632788 12632964 -240623619 - MIR SINE MIR -66 142 11 303 192 0 0 chr2 12633849 12633901 -240622682 + MER53 DNA DNA 1 52 -137 284 364 8 8 chr2 12633991 12634109 -240622474 - MIR SINE MIR -125 137 20 390 195 54 81 chr2 12634231 12634380 -240622203 + MER104 DNA Tc2 1 145 -35 416 261 30 3 chr2 12635454 12635586 -240620997 - MIR SINE MIR -63 145 20 467 250 75 33 chr2 12635986 12636147 -240620436 + MIR SINE MIR 5 173 -63 182 320 111 107 chr2 12636124 12636349 -240620234 + L2 LINE L2 3023 3248 -24 * 362 288 38 11 chr2 12636687 12636829 -240619754 - MIR SINE MIR -64 144 18 328 254 73 34 chr2 12637560 12637715 -240618868 - MIR SINE MIR -42 220 59 238 285 35 36 chr2 12637736 12637845 -240618738 - MIR SINE MIR -102 106 3 201 169 15 62 chr2 12638068 12638133 -240618450 + CT-rich Low_complexity Low_complexity 3 64 0 357 287 105 0 chr2 12638553 12638696 -240617887 + MIR3 SINE MIR 24 181 -27 322 337 21 0 chr2 12639592 12639687 -240616896 + L3 LINE CR1 1467 1563 -14 233 119 24 0 chr2 12639777 12639819 -240616764 + CT-rich Low_complexity Low_complexity 2 44 0 421 199 7 40 chr2 12639892 12640043 -240616540 + GA-rich Low_complexity Low_complexity 2 147 0 267 268 14 0 chr2 12640071 12640142 -240616441 + GA-rich Low_complexity Low_complexity 3 74 0 231 313 0 50 chr2 12641685 12641765 -240614818 + MIR3 SINE MIR 15 90 -118 211 266 78 16 chr2 12641782 12641846 -240614737 - MIR SINE MIR -90 172 105 505 321 96 44 chr2 12642113 12642372 -240614211 - L2 LINE L2 -17 3296 3052 1872 121 92 0 chr2 12642372 12642644 -240613939 + AluSx SINE Alu 1 297 -15 505 321 96 44 chr2 12642644 12642984 -240613599 - L2 LINE L2 -261 3052 2643 2036 131 0 0 chr2 12642984 12643299 -240613284 + AluSx SINE Alu 1 315 0 505 321 96 44 chr2 12643299 12643383 -240613200 - L2 LINE L2 -670 2643 2565 1629 138 4 11 chr2 12643491 12643759 -240612824 + L1MA4 LINE L1 6035 6300 0 418 303 114 0 chr2 12645432 12645607 -240610976 + MIR SINE MIR 53 247 -15 368 292 41 18 chr2 12646301 12646475 -240610108 + MIR SINE MIR 2 174 -63 473 264 63 29 chr2 12647163 12647337 -240609246 + MER5A DNA MER1_type 7 186 -3 2115 146 50 19 chr2 12647796 12648160 -240608423 + THE1C LTR MaLR 1 375 0 23 33 0 0 chr2 12648416 12648446 -240608137 + AT_rich Low_complexity Low_complexity 1 30 0 415 265 118 12 chr2 12649391 12649561 -240607022 - MIR SINE MIR -56 206 19 866 281 121 25 chr2 12649580 12650028 -240606555 - MLT1H LTR MaLR -19 530 40 21 0 0 0 chr2 12650228 12650249 -240606334 + AT_rich Low_complexity Low_complexity 1 21 0 404 305 116 56 chr2 12650293 12650824 -240605759 + L2 LINE L2 2684 3271 -1 1058 97 0 0 chr2 12650851 12650995 -240605588 - L1PA4 LINE L1 -2 6153 6010 971 65 29 1 chr2 12650995 12651141 -240605442 + L1PA4 LINE L1 5923 6079 -86 203 295 42 32 chr2 12651487 12651582 -240605001 - L2 LINE L2 -2691 623 528 362 279 11 49 chr2 12651629 12651875 -240604708 + (TATATG)n Simple_repeat Simple_repeat 1 236 0 205 312 43 0 chr2 12651922 12652015 -240604568 + (TATATG)n Simple_repeat Simple_repeat 5 101 0 304 325 44 12 chr2 12652320 12652480 -240604103 + MIR3 SINE MIR 32 196 -12 236 269 138 39 chr2 12652794 12652924 -240603659 + MIR SINE MIR 50 192 -70 1689 216 74 9 chr2 12653383 12653845 -240602738 + Charlie4a DNA MER1_type 17 508 0 401 264 214 16 chr2 12654150 12654332 -240602251 - MIR SINE MIR -2 260 43 30 0 0 0 chr2 12655117 12655147 -240601436 + AT_rich Low_complexity Low_complexity 1 30 0 2372 127 33 25 chr2 12655225 12655586 -240600997 - THE1B LTR MaLR 0 364 1 11272 104 6 36 chr2 12655586 12657214 -240599369 - THE1B-int LTR MaLR 0 1580 2 2101 147 42 31 chr2 12657215 12657575 -240599008 - THE1B LTR MaLR 0 364 1 432 312 26 13 chr2 12657797 12657951 -240598632 - MIR SINE MIR -71 191 36 447 308 69 20 chr2 12658617 12658837 -240597746 + MIR SINE MIR 15 242 -20 203 329 25 0 chr2 12659095 12659174 -240597409 - L2 LINE L2 -7 3265 3185 550 320 90 46 chr2 12659746 12659839 -240596744 - HAL1b LINE L1 -631 717 630 7860 32 0 4 chr2 12659839 12660815 -240595768 - L1PA4 LINE L1 -2 6153 5176 550 320 90 46 chr2 12660815 12661155 -240595428 - HAL1b LINE L1 -718 630 265 21 36 0 0 chr2 12661708 12661736 -240594847 + AT_rich Low_complexity Low_complexity 1 28 0 634 348 104 34 chr2 12661784 12662955 -240593628 + L1M4 LINE L1 4151 5403 -743 437 113 12 88 chr2 12663034 12663114 -240593469 + MER58B DNA MER1_type 259 332 -9 7452 52 16 2 chr2 12663124 12664225 -240592358 + L1PA7 LINE L1 5036 6148 -6 2132 117 0 3 chr2 12664391 12664691 -240591892 - AluSg SINE Alu -11 299 1 22 35 0 0 chr2 12664706 12664735 -240591848 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 12664803 12664824 -240591759 + AT_rich Low_complexity Low_complexity 1 21 0 2134 117 0 13 chr2 12665213 12665512 -240591071 - AluSx SINE Alu -17 295 1 1822 139 0 24 chr2 12665991 12666286 -240590297 + AluSg SINE Alu 17 304 -6 241 313 114 15 chr2 12666504 12666635 -240589948 + L2 LINE L2 3168 3311 -2 334 290 178 0 chr2 12666736 12666905 -240589678 + MIR SINE MIR 56 254 -8 511 333 21 12 chr2 12667866 12668106 -240588477 - MIR SINE MIR -13 249 8 213 231 0 31 chr2 12669428 12669493 -240587090 + GA-rich Low_complexity Low_complexity 4 66 0 448 284 129 19 chr2 12669969 12670025 -240586558 - MER5A DNA MER1_type -14 175 127 5674 132 34 2 chr2 12670025 12670402 -240586181 + L1PA13 LINE L1 4313 4677 -1486 336 18 53 18 chr2 12670402 12670459 -240586124 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 5674 132 34 2 chr2 12670459 12671441 -240585142 + L1PA13 LINE L1 4677 5723 -440 306 0 0 0 chr2 12671441 12671475 -240585108 + (CA)n Simple_repeat Simple_repeat 2 35 0 5674 132 34 2 chr2 12671475 12671927 -240584656 + L1PA13 LINE L1 5723 6159 -4 448 284 129 19 chr2 12671927 12672025 -240584558 - MER5A DNA MER1_type -62 127 4 3168 138 6 26 chr2 12672137 12672636 -240583947 + LOR1a LTR ERV1 1 489 -8 341 366 0 38 chr2 12673119 12673250 -240583333 - L2 LINE L2 -214 3058 2933 203 170 0 19 chr2 12673742 12673795 -240582788 + (TA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr2 12673964 12673985 -240582598 + AT_rich Low_complexity Low_complexity 1 21 0 2244 83 24 3 chr2 12676049 12676339 -240580244 + AluY SINE Alu 1 296 -15 408 357 40 12 chr2 12676354 12676606 -240579977 + L3 LINE CR1 1301 1559 -18 180 297 66 66 chr2 12677191 12677282 -240579301 + MIR SINE MIR 57 147 -115 266 278 52 43 chr2 12677622 12677737 -240578846 + MIR3 SINE MIR 81 196 -12 219 329 26 0 chr2 12678427 12678503 -240578080 + MIR SINE MIR 63 140 -122 227 397 45 13 chr2 12679373 12679597 -240576986 + MIR SINE MIR 21 251 -11 192 179 0 0 chr2 12679607 12679646 -240576937 + (TTA)n Simple_repeat Simple_repeat 3 41 0 247 313 0 0 chr2 12680343 12680426 -240576157 + GA-rich Low_complexity Low_complexity 2 84 0 3833 217 54 10 chr2 12681539 12682430 -240574153 + MER63C DNA MER1_type 1 930 0 431 137 17 188 chr2 12682472 12682589 -240573994 - MER7A DNA MER2_type 0 337 241 2281 219 68 39 chr2 12682632 12683341 -240573242 + L1ME1 LINE L1 5176 5899 -267 6621 124 91 13 chr2 12683342 12684483 -240572100 + Tigger3b DNA MER2_type 2 1231 0 584 202 0 26 chr2 12684491 12684605 -240571978 - MER7A DNA MER2_type -237 109 1 308 200 14 0 chr2 12684605 12684675 -240571908 + L1ME2 LINE L1 5908 5978 -186 2602 67 0 0 chr2 12684675 12684987 -240571596 + AluSq SINE Alu 1 312 -1 2218 84 3 24 chr2 12685034 12685351 -240571232 - AluSp SINE Alu 0 313 6 218 308 23 75 chr2 12686091 12686224 -240570359 + MIR SINE MIR 49 174 -88 22 0 0 0 chr2 12687124 12687146 -240569437 + AT_rich Low_complexity Low_complexity 1 22 0 1792 237 29 26 chr2 12687583 12688035 -240568548 + MLT1C LTR MaLR 2 454 -13 439 171 19 0 chr2 12688736 12688841 -240567742 + CT-rich Low_complexity Low_complexity 2 108 0 473 298 33 2 chr2 12689111 12689289 -240567294 - MIR SINE MIR -65 197 16 243 0 0 0 chr2 12689868 12689895 -240566688 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 431 239 52 76 chr2 12690879 12691118 -240565465 - MIR SINE MIR 0 262 16 237 167 0 37 chr2 12691847 12691901 -240564682 + CT-rich Low_complexity Low_complexity 3 54 0 192 362 0 0 chr2 12691971 12692029 -240564554 - MIR SINE MIR -121 141 84 3354 164 43 11 chr2 12693152 12693747 -240562836 - MER6A DNA MER2_type -13 592 -11 295 256 134 43 chr2 12694282 12694446 -240562137 + MIR3 SINE MIR 3 181 -27 210 86 0 103 chr2 12695953 12696011 -240560572 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 438 287 153 0 chr2 12696887 12697044 -240559539 - MER5A DNA MER1_type -5 184 4 239 376 30 51 chr2 12697046 12697243 -240559340 + MIR3 SINE MIR 16 208 0 2383 170 17 10 chr2 12697412 12697830 -240558753 + L1M2 LINE L1 5344 5764 -527 4014 122 89 74 chr2 12697831 12698604 -240557979 - LTR1 LTR ERV1 0 785 1 2558 43 0 7 chr2 12698675 12698980 -240557603 + AluY SINE Alu 1 303 -8 239 292 112 11 chr2 12699631 12699720 -240556863 + L2 LINE L2 3170 3267 -5 196 326 76 21 chr2 12700866 12701010 -240555573 - MIR SINE MIR -77 185 34 275 349 70 6 chr2 12701635 12701807 -240554776 + MIR SINE MIR 80 262 0 198 319 250 17 chr2 12702020 12702136 -240554447 + L2 LINE L2 3123 3265 -7 * 210 296 286 10 chr2 12702133 12702231 -240554352 + L2 LINE L2 3128 3252 -20 239 316 0 0 chr2 12702324 12702381 -240554202 + MIR SINE MIR 28 84 -124 579 306 128 35 chr2 12702554 12702959 -240553624 + L2 LINE L2 2871 3313 0 261 317 0 0 chr2 12703478 12703538 -240553045 + MIR3 SINE MIR 125 184 -24 331 306 73 48 chr2 12703989 12704195 -240552388 + MIR SINE MIR 20 230 -32 958 190 31 20 chr2 12705303 12705426 -240551157 + MER3 DNA MER1_type 9 136 -73 2038 118 10 0 chr2 12705426 12705715 -240550868 - AluSx SINE Alu -20 292 1 958 190 31 20 chr2 12705715 12705786 -240550797 + MER3 DNA MER1_type 136 205 -4 1202 273 39 56 chr2 12706052 12706607 -240549976 + MLT1G3 LTR MaLR 1 491 -61 288 0 0 0 chr2 12706607 12706639 -240549944 + (TG)n Simple_repeat Simple_repeat 1 32 0 1202 273 39 56 chr2 12706639 12706700 -240549883 + MLT1G3 LTR MaLR 491 552 0 208 305 12 12 chr2 12707072 12707154 -240549429 + MIR SINE MIR 99 180 -82 2077 100 33 10 chr2 12708420 12708721 -240547862 - AluY SINE Alu -3 308 1 2438 77 0 26 chr2 12709205 12709515 -240547068 + AluSp SINE Alu 1 302 -11 257 351 131 16 chr2 12709519 12709710 -240546873 - MIR SINE MIR -13 249 37 2261 233 66 38 chr2 12709798 12710400 -240546183 + MLT1E2 LTR MaLR 8 626 0 180 125 0 0 chr2 12710417 12710449 -240546134 + (TG)n Simple_repeat Simple_repeat 2 33 0 258 380 36 15 chr2 12711137 12711274 -240545309 - L2 LINE L2 -31 3241 3102 2193 114 0 0 chr2 12711715 12712025 -240544558 + AluSc SINE Alu 1 310 0 335 223 21 34 chr2 12713128 12713247 -240543336 - LTR33A LTR ERVL -16 779 389 3024 175 19 7 chr2 12713249 12713787 -240542796 + L1MC/D LINE L1 5276 5819 -514 3388 147 10 34 chr2 12713787 12714030 -240542553 + L1MC1 LINE L1 5757 6004 -329 2394 76 13 0 chr2 12714030 12714333 -240542250 + AluSg SINE Alu 1 307 -3 3388 147 10 34 chr2 12714333 12714673 -240541910 + L1MC1 LINE L1 6004 6328 -5 256 252 103 52 chr2 12715036 12715191 -240541392 - LTR50 LTR ERVL -614 181 19 235 329 92 48 chr2 12715295 12715523 -240541060 - MIR SINE MIR -5 257 20 410 326 93 33 chr2 12716688 12716903 -240539680 - MIR SINE MIR -6 256 29 1960 165 17 31 chr2 12717703 12718054 -240538529 - MER7A DNA MER2_type -1 345 2 1183 191 58 95 chr2 12719290 12719414 -240537169 + MSTD LTR MaLR 60 187 -209 1565 155 0 54 chr2 12719414 12719692 -240536891 - AluSx SINE Alu -11 301 39 1183 191 58 95 chr2 12719692 12719913 -240536670 + MSTD LTR MaLR 187 392 -4 195 293 76 88 chr2 12719936 12720185 -240536398 - L2 LINE L2 -38 3275 3030 329 376 20 36 chr2 12720408 12720658 -240535925 - L2 LINE L2 -570 2744 2499 764 301 53 4 chr2 12721036 12721163 -240535420 + MIR SINE MIR 4 123 -139 4818 98 71 8 chr2 12721163 12721879 -240534704 + L1MA1 LINE L1 5542 6302 0 764 301 53 4 chr2 12721879 12721997 -240534586 + MIR SINE MIR 123 261 -1 305 295 13 0 chr2 12722094 12722172 -240534411 + L2 LINE L2 3234 3312 -1 2428 68 3 3 chr2 12722341 12722635 -240533948 - AluSq SINE Alu -15 298 5 7720 132 39 110 chr2 12723186 12725002 -240531581 - pTR5 LTR ERV1 -1 2437 741 297 0 0 0 chr2 12726058 12726091 -240530492 + (CA)n Simple_repeat Simple_repeat 2 34 0 251 170 21 0 chr2 12726160 12726207 -240530376 - MLT1K LTR MaLR -5 583 536 494 343 102 26 chr2 12726485 12726908 -240529675 - MLT1K LTR MaLR -131 457 3 284 367 48 37 chr2 12726963 12727151 -240529432 + L2 LINE L2 2898 3087 -185 195 222 0 0 chr2 12727284 12727320 -240529263 - L2 LINE L2 -12 3301 3266 243 88 0 0 chr2 12727343 12727377 -240529206 + (TG)n Simple_repeat Simple_repeat 1 34 0 260 265 36 12 chr2 12727389 12727472 -240529111 - MIR3 SINE MIR -6 202 118 248 175 16 0 chr2 12727683 12727746 -240528837 + CT-rich Low_complexity Low_complexity 2 65 0 267 346 152 24 chr2 12728462 12728996 -240527587 - L2 LINE L2 -37 3276 2662 883 263 56 91 chr2 12729034 12729343 -240527240 + MLT1F1 LTR MaLR 67 352 -215 2036 160 31 16 chr2 12729343 12729725 -240526858 - MLT1B LTR MaLR -2 388 1 883 263 56 91 chr2 12729725 12729932 -240526651 + MLT1F1 LTR MaLR 352 565 -2 1313 244 13 21 chr2 12729935 12730429 -240526154 + MLT1F-int LTR MaLR 1 606 -765 3213 146 0 0 chr2 12730630 12731116 -240525467 - MER66B LTR ERV1 0 486 1 256 331 62 38 chr2 12731160 12731320 -240525263 + MLT1F-int LTR MaLR 693 856 -515 270 286 135 0 chr2 12731741 12731867 -240524716 + MLT1F-int LTR MaLR 1227 1369 -2 1025 217 72 136 chr2 12731873 12732343 -240524240 + MLT1F LTR MaLR 5 433 -109 2296 77 0 51 chr2 12732343 12732656 -240523927 - AluY SINE Alu -14 297 1 1025 217 72 136 chr2 12732656 12732757 -240523826 + MLT1F LTR MaLR 433 539 -3 216 245 0 20 chr2 12732758 12732807 -240523776 - L2 LINE L2 -644 2670 2623 577 259 48 24 chr2 12733214 12733546 -240523037 - L1M4 LINE L1 -2820 3326 2987 1666 252 62 22 chr2 12733546 12734098 -240522485 + MER76 LTR ERV 1 574 -114 723 97 0 9 chr2 12734116 12734230 -240522353 + LOR1b LTR ERV1 1 113 -348 2421 66 0 3 chr2 12734785 12735090 -240521493 + AluYa5 SINE Alu 1 304 -7 24 32 0 0 chr2 12735302 12735333 -240521250 + AT_rich Low_complexity Low_complexity 1 31 0 1025 269 71 29 chr2 12735472 12735948 -240520635 - LTR33 LTR ERVL -25 496 1 988 181 10 5 chr2 12736165 12736358 -240520225 + MER50 LTR ERV1 1 194 -540 2028 129 0 0 chr2 12736514 12736801 -240519782 + AluSx SINE Alu 1 287 -25 248 227 45 0 chr2 12737142 12737208 -240519375 + L1ME3A LINE L1 2725 2793 -3353 330 254 54 54 chr2 12737219 12737440 -240519143 + L1ME3A LINE L1 2854 3077 -3069 3367 206 6 0 chr2 12737440 12738129 -240518454 + L1MB8 LINE L1 5484 6176 -2 330 254 54 54 chr2 12738129 12738222 -240518361 + L1ME3A LINE L1 3076 3168 -2978 317 322 0 0 chr2 12738361 12738451 -240518132 + L1MC4 LINE L1 6614 6703 -1339 5520 58 7 1 chr2 12738457 12739506 -240517077 - L1PA7 LINE L1 -18 6113 5037 720 155 6 98 chr2 12739517 12739691 -240516892 - MER58A DNA MER1_type -10 214 57 291 197 26 40 chr2 12739829 12739905 -240516678 - MER58A DNA MER1_type -32 75 1 * 547 207 0 16 chr2 12739905 12740024 -240516559 + MER105 DNA DNA 46 162 -42 628 277 96 54 chr2 12740141 12740808 -240515775 + L1ME3A LINE L1 3257 3958 -2188 2254 90 0 0 chr2 12740808 12741108 -240515475 + AluY SINE Alu 2 301 -10 628 277 96 54 chr2 12741108 12741162 -240515421 + L1ME3A LINE L1 3958 4008 -2138 321 322 6 6 chr2 12741260 12741434 -240515149 + L1ME3A LINE L1 5777 5950 -220 245 341 57 23 chr2 12741701 12741877 -240514706 + MLT1L LTR MaLR 352 533 -82 271 301 24 49 chr2 12742487 12742610 -240513973 - MIR SINE MIR -100 162 43 488 187 22 22 chr2 12742672 12742811 -240513772 + CT-rich Low_complexity Low_complexity 2 140 0 557 204 95 7 chr2 12743367 12743514 -240513069 - MER5A DNA MER1_type -26 163 4 605 192 68 14 chr2 12743520 12743666 -240512917 + MER105 DNA DNA 49 202 -2 404 298 274 4 chr2 12743672 12743917 -240512666 + L2 LINE L2 2248 2558 -756 336 254 234 43 chr2 12743955 12744236 -240512347 + L2 LINE L2 2724 3036 -277 822 159 0 0 chr2 12744298 12744424 -240512159 - FLAM_C SINE Alu -7 136 11 526 278 63 10 chr2 12744435 12744640 -240511943 + L2 LINE L2 3098 3313 0 218 253 0 77 chr2 12745423 12745514 -240511069 - MIR3 SINE MIR -14 194 111 468 262 52 6 chr2 12746452 12746624 -240509959 + MLT1H LTR MaLR 1 180 -369 580 256 68 34 chr2 12747110 12747376 -240509207 + Charlie2b DNA MER1_type 5 279 -2503 257 307 109 0 chr2 12747414 12747515 -240509068 + Charlie2b DNA MER1_type 561 672 -2110 255 211 0 18 chr2 12747521 12747578 -240509005 + CT-rich Low_complexity Low_complexity 2 57 0 26 0 0 0 chr2 12747623 12747649 -240508934 + AT_rich Low_complexity Low_complexity 1 26 0 662 274 11 6 chr2 12747870 12748064 -240508519 + MLT1F LTR MaLR 1 244 -351 2117 132 3 3 chr2 12748794 12749098 -240507485 + AluSx SINE Alu 1 304 -8 193 311 28 5 chr2 12749467 12749542 -240507041 - MIR SINE MIR -110 98 19 1548 197 17 24 chr2 12749598 12749892 -240506691 - AluJo SINE Alu -20 292 1 219 289 157 0 chr2 12750957 12751078 -240505505 - MIR SINE MIR -12 250 111 630 324 57 5 chr2 12751329 12751539 -240505044 - MIR SINE MIR -37 225 5 1033 270 99 42 chr2 12751823 12752297 -240504286 + MLT1D LTR MaLR 5 505 0 1711 233 20 15 chr2 12752558 12752962 -240503621 - MLT2D LTR ERVL -8 406 1 183 287 58 35 chr2 12753753 12753840 -240502743 + MIR SINE MIR 26 114 -148 430 130 120 30 chr2 12753849 12753949 -240502634 - ORSL DNA AcHobo -8 267 159 38 96 0 0 chr2 12753966 12754081 -240502502 + AT_rich Low_complexity Low_complexity 1 115 0 241 220 0 17 chr2 12754130 12754189 -240502394 + MLT1B LTR MaLR 114 171 -219 300 232 0 14 chr2 12754283 12754352 -240502231 - ORSL DNA AcHobo -207 68 1 191 195 73 0 chr2 12754353 12754394 -240502189 + MIR3 SINE MIR 111 154 -54 308 313 65 52 chr2 12754531 12754761 -240501822 + MIR SINE MIR 17 249 -13 1552 207 41 34 chr2 12755091 12755478 -240501105 + MLT1B LTR MaLR 1 390 0 190 334 63 34 chr2 12756151 12756282 -240500301 + MIR SINE MIR 4 138 -70 238 283 104 96 chr2 12756985 12757215 -240499368 + L2 LINE L2 3040 3271 -1 773 267 95 4 chr2 12757671 12757903 -240498680 + MIR SINE MIR 10 262 0 348 338 40 26 chr2 12758514 12758665 -240497918 + MIR3 SINE MIR 39 191 -17 847 223 51 0 chr2 12758704 12758901 -240497682 + MER3 DNA MER1_type 3 209 0 284 348 26 19 chr2 12759183 12759338 -240497245 + L2 LINE L2 3158 3313 0 261 314 48 19 chr2 12759336 12759441 -240497142 - L2 LINE L2 -4 3268 3161 * 250 372 73 15 chr2 12759637 12759774 -240496809 + L2 LINE L2 3121 3265 -7 547 166 11 160 chr2 12759883 12760070 -240496513 + MLT1D LTR MaLR 8 166 -339 1069 198 23 163 chr2 12760171 12760606 -240495977 + MLT2D LTR ERVL 5 395 -19 352 136 39 19 chr2 12760607 12760710 -240495873 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 961 157 25 44 chr2 12760718 12760922 -240495661 + Tigger2 DNA MER2_type 11 210 -2508 756 163 34 7 chr2 12760921 12761068 -240495515 + Tigger2 DNA MER2_type 2554 2704 -14 * 347 102 0 0 chr2 12761078 12761127 -240495456 + MLT2D LTR ERVL 349 397 0 561 240 174 5 chr2 12761127 12761323 -240495260 + MLT1D LTR MaLR 277 505 0 204 40 0 0 chr2 12761978 12762003 -240494580 + (TTC)n Simple_repeat Simple_repeat 2 26 0 1487 194 37 7 chr2 12762008 12762281 -240494302 - AluJo SINE Alu -31 281 1 2332 154 19 26 chr2 12762451 12762880 -240493703 - MSTC LTR MaLR 0 428 3 489 350 25 10 chr2 12762888 12763091 -240493492 - MIR SINE MIR -18 244 39 202 118 29 0 chr2 12764068 12764102 -240492481 + CT-rich Low_complexity Low_complexity 5 39 0 1643 238 85 48 chr2 12764119 12764788 -240491795 - L1MD2 LINE L1 -13 6329 5636 774 295 116 34 chr2 12764792 12765473 -240491110 - L1MD2 LINE L1 -2639 3490 2754 858 210 49 10 chr2 12765482 12765687 -240490896 - L1MC/D LINE L1 -553 5689 5477 277 291 200 0 chr2 12766242 12766352 -240490231 - MER91A DNA MER1_type 0 196 65 713 277 90 93 chr2 12766853 12766958 -240489625 - L1MD2 LINE L1 -4882 1237 1133 2416 90 3 0 chr2 12766958 12767259 -240489324 - AluSg SINE Alu -8 302 1 713 277 90 93 chr2 12767259 12767271 -240489312 - L1MD2 LINE L1 -4986 1133 1122 2181 140 0 0 chr2 12767271 12767578 -240489005 - AluSx SINE Alu 0 312 6 713 277 90 93 chr2 12767578 12768112 -240488471 - L1MD2 LINE L1 -4997 1122 587 1036 83 0 0 chr2 12768177 12768309 -240488274 - AluY SINE Alu -17 294 163 358 388 65 4 chr2 12768330 12768562 -240488021 - L1MD2 LINE L1 -5721 398 153 1995 104 34 83 chr2 12769269 12769596 -240486987 - AluSq SINE Alu -2 311 1 834 138 26 0 chr2 12769596 12769748 -240486835 + MER50 LTR ERV1 566 721 -13 1827 126 41 0 chr2 12769926 12770232 -240486351 + AluSx SINE Alu 1 317 0 248 255 160 13 chr2 12770497 12770728 -240485855 - L1MEd LINE L1 -4887 1232 968 249 275 29 0 chr2 12771869 12771938 -240484645 - MIR SINE MIR -109 153 83 347 341 58 23 chr2 12773046 12773219 -240483364 - MIR3 SINE MIR -12 196 18 728 221 111 0 chr2 12773339 12773538 -240483045 + MER96B DNA MER1_type? 197 417 0 1011 197 26 22 chr2 12774289 12774558 -240482025 - MER58B DNA MER1_type -10 331 62 228 234 0 0 chr2 12774865 12774929 -240481654 + T-rich Low_complexity Low_complexity 1 64 0 408 71 0 0 chr2 12775598 12775654 -240480929 + (TG)n Simple_repeat Simple_repeat 2 57 0 230 292 56 0 chr2 12776223 12776295 -240480288 - MIR SINE MIR -28 234 159 257 200 18 0 chr2 12776307 12776362 -240480221 + MIR SINE MIR 13 68 -194 963 237 157 59 chr2 12776407 12776867 -240479716 + MLT1D LTR MaLR 1 505 0 340 267 0 0 chr2 12776867 12776953 -240479630 + MIR SINE MIR 163 248 -14 424 281 96 37 chr2 12777468 12778037 -240478546 + L1MEc LINE L1 1478 2085 -4874 600 185 29 6 chr2 12778123 12778296 -240478287 + GA-rich Low_complexity Low_complexity 2 178 0 203 213 0 21 chr2 12778339 12778386 -240478197 + A-rich Low_complexity Low_complexity 1 46 0 634 276 71 51 chr2 12778387 12778453 -240478130 + L1MEc LINE L1 2321 2384 -4754 2188 141 0 0 chr2 12778453 12778758 -240477825 + AluY SINE Alu 1 305 -6 634 276 71 51 chr2 12778758 12779181 -240477402 + L1MEc LINE L1 2384 2820 -4318 329 153 59 0 chr2 12779386 12779471 -240477112 + L1MEc LINE L1 3712 3801 -3156 2352 152 5 5 chr2 12779551 12779953 -240476630 - LOR1a LTR ERV1 -2 495 94 713 179 49 31 chr2 12780318 12780541 -240476042 - AluY SINE Alu -84 227 1 2184 97 14 3 chr2 12780570 12780860 -240475723 + AluY SINE Alu 1 293 -18 1855 238 99 34 chr2 12780887 12781475 -240475108 - MLT1E2 LTR MaLR 0 626 1 207 96 58 0 chr2 12782108 12782160 -240474423 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 227 352 48 38 chr2 12782642 12782747 -240473836 + MIR SINE MIR 80 185 -77 259 274 73 37 chr2 12783964 12784128 -240472455 + L1ME LINE L1 5406 5575 -546 216 0 0 0 chr2 12784375 12784399 -240472184 + (A)n Simple_repeat Simple_repeat 1 24 0 47 33 0 0 chr2 12784848 12784909 -240471674 + AT_rich Low_complexity Low_complexity 1 61 0 265 406 31 16 chr2 12785376 12785504 -240471079 - L2 LINE L2 -28 3244 3115 299 313 18 6 chr2 12786186 12786349 -240470234 + (TGAA)n Simple_repeat Simple_repeat 3 167 0 1706 125 0 99 chr2 12786966 12787270 -240469313 - AluSx SINE Alu -3 309 36 322 395 17 31 chr2 12788053 12788342 -240468241 + L3 LINE CR1 1267 1551 -26 26 0 0 0 chr2 12790059 12790085 -240466498 + AT_rich Low_complexity Low_complexity 1 26 0 530 216 0 97 chr2 12790756 12790884 -240465699 + MER5B DNA MER1_type 1 109 -69 2931 113 9 19 chr2 12790884 12791345 -240465238 - L1PA10 LINE L1 -4 6164 5709 530 216 0 97 chr2 12791345 12791392 -240465191 + MER5B DNA MER1_type 109 159 -19 200 406 100 29 chr2 12792264 12792545 -240464038 - L2 LINE L2 -31 3241 2941 269 293 24 67 chr2 12792986 12793150 -240463433 - L1MEd LINE L1 -5643 476 320 210 150 0 0 chr2 12793273 12793313 -240463270 + (CA)n Simple_repeat Simple_repeat 2 41 0 242 227 15 15 chr2 12793369 12793435 -240463148 - MLT1G1 LTR MaLR 0 595 530 2302 106 3 6 chr2 12794160 12794471 -240462112 + AluSx SINE Alu 1 310 -2 1079 248 95 47 chr2 12794640 12795083 -240461500 + MLT1L LTR MaLR 104 567 -48 41 0 0 0 chr2 12795712 12795753 -240460830 + AT_rich Low_complexity Low_complexity 1 41 0 223 236 9 28 chr2 12795979 12796085 -240460498 + A-rich Low_complexity Low_complexity 4 107 0 182 268 18 18 chr2 12796177 12796233 -240460350 + L2 LINE L2 2995 3050 -222 2578 45 0 7 chr2 12796292 12796601 -240459982 - AluY SINE Alu -4 307 1 1947 165 74 20 chr2 12796648 12797053 -240459530 - MSTA LTR MaLR -1 427 1 1119 197 23 40 chr2 12797131 12797603 -240458980 - pTR5 LTR ERV1 -1189 1249 741 955 236 25 0 chr2 12797686 12797889 -240458694 + MER58A DNA MER1_type 2 209 -15 3782 9 0 0 chr2 12797892 12798338 -240458245 + L1HS LINE L1 5710 6155 0 25 0 0 0 chr2 12798338 12798363 -240458220 + AT_rich Low_complexity Low_complexity 1 25 0 240 59 0 0 chr2 12798380 12798414 -240458169 + (A)n Simple_repeat Simple_repeat 1 34 0 251 404 0 34 chr2 12798458 12798604 -240457979 + L2 LINE L2 3084 3224 -48 451 320 26 7 chr2 12798652 12798805 -240457778 - MIR3 SINE MIR -38 170 15 211 376 64 18 chr2 12800187 12800296 -240456287 + L2 LINE L2 3118 3231 -41 303 274 36 0 chr2 12801495 12801579 -240455004 - MIR SINE MIR -122 140 54 304 191 0 0 chr2 12802037 12802084 -240454499 - L2 LINE L2 -21 3251 3205 351 330 16 69 chr2 12802223 12802427 -240454156 - MIR SINE MIR -45 217 18 314 273 78 23 chr2 12802601 12802729 -240453854 - L1ME4a LINE L1 -115 6006 5872 1701 218 76 44 chr2 12802731 12803281 -240453302 - MLT1E2 LTR MaLR -2 624 57 351 259 74 0 chr2 12803351 12803459 -240453124 - L2 LINE L2 -9 3304 3189 340 275 206 5 chr2 12803506 12803724 -240452859 - L1ME4a LINE L1 -299 5822 5561 22 0 0 0 chr2 12804143 12804165 -240452418 + AT_rich Low_complexity Low_complexity 1 22 0 239 276 0 0 chr2 12806055 12806113 -240450470 + (TG)n Simple_repeat Simple_repeat 1 58 0 610 311 27 32 chr2 12806798 12807017 -240449566 - MIR SINE MIR -19 243 26 324 0 0 0 chr2 12807070 12807106 -240449477 + (CA)n Simple_repeat Simple_repeat 2 37 0 227 244 23 12 chr2 12807589 12807675 -240448908 - L1 LINE L1 -1110 5036 4950 304 281 116 66 chr2 12807858 12808100 -240448483 - L1 LINE L1 -3228 2918 2665 191 36 36 0 chr2 12808495 12808523 -240448060 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1923 127 0 24 chr2 12808526 12808817 -240447766 - AluSx SINE Alu -28 284 1 1256 303 78 16 chr2 12808860 12810277 -240446306 - L1ME3 LINE L1 -81 6081 4570 367 310 92 15 chr2 12810291 12810562 -240446021 - L1ME3 LINE L1 -1749 4397 4106 307 279 109 57 chr2 12810866 12811113 -240445470 + L1ME4a LINE L1 5825 6084 -37 2103 122 3 3 chr2 12812393 12812689 -240443894 + AluSx SINE Alu 1 296 -16 1915 156 68 11 chr2 12812802 12813155 -240443428 - THE1C LTR MaLR -2 373 1 261 351 45 19 chr2 12813702 12813856 -240442727 - MIR SINE MIR -84 178 21 427 176 12 0 chr2 12814543 12814628 -240441955 - L1PA16 LINE L1 -5 6161 6076 243 235 17 9 chr2 12816308 12816423 -240440160 + CT-rich Low_complexity Low_complexity 1 116 0 24 77 0 0 chr2 12817197 12817249 -240439334 + AT_rich Low_complexity Low_complexity 1 52 0 1854 135 3 48 chr2 12818077 12818389 -240438194 - AluY SINE Alu -5 306 9 360 355 87 19 chr2 12821308 12821548 -240435035 + MIR SINE MIR 2 256 -6 393 22 0 0 chr2 12822143 12822189 -240434394 + (CA)n Simple_repeat Simple_repeat 1 46 0 191 181 14 0 chr2 12822195 12822267 -240434316 + CT-rich Low_complexity Low_complexity 2 74 0 1195 212 20 7 chr2 12822766 12823058 -240433525 - L1MA8 LINE L1 -2 6289 5994 205 265 29 29 chr2 12823099 12823167 -240433416 - L2 LINE L2 -25 3288 3221 506 181 0 0 chr2 12824396 12824479 -240432104 - MLT1J LTR MaLR -332 179 97 513 290 61 49 chr2 12824708 12825283 -240431300 + L1M4 LINE L1 3808 4389 -1757 23 0 0 0 chr2 12825550 12825573 -240431010 + AT_rich Low_complexity Low_complexity 1 23 0 2093 128 75 20 chr2 12825604 12825949 -240430634 + THE1B LTR MaLR 1 364 0 2970 123 0 19 chr2 12827066 12827452 -240429131 - L1PA15 LINE L1 -4 6161 5769 180 0 0 0 chr2 12827452 12827472 -240429111 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2093 93 11 0 chr2 12827472 12827750 -240428833 - AluY SINE Alu -30 281 1 2970 123 0 19 chr2 12827750 12827825 -240428758 - L1PA15 LINE L1 -394 5771 5708 602 303 95 36 chr2 12827911 12828463 -240428120 - L1MCa LINE L1 -5826 669 34 264 59 0 0 chr2 12828914 12828948 -240427635 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 215 361 76 13 chr2 12829015 12829173 -240427410 - MIR SINE MIR -64 198 31 258 237 17 0 chr2 12829708 12829767 -240426816 + L3 LINE CR1 1313 1372 -205 3321 236 44 29 chr2 12829900 12831230 -240425353 - L1M4c LINE L1 -4480 2166 817 264 222 0 0 chr2 12831230 12831302 -240425281 + A-rich Low_complexity Low_complexity 1 72 0 455 285 32 0 chr2 12831323 12831446 -240425137 - L1M4c LINE L1 -5804 738 612 1398 224 49 29 chr2 12831455 12831804 -240424779 + MLT1A1 LTR MaLR 10 365 0 292 339 66 19 chr2 12831814 12832071 -240424512 - L1M4c LINE L1 -5936 606 338 1826 179 39 18 chr2 12832530 12832913 -240423670 + MLT1B LTR MaLR 1 467 0 978 302 109 10 chr2 12833080 12833576 -240423007 + HAL1 LINE L1 202 746 -1761 345 247 0 0 chr2 12833579 12833656 -240422927 - MER105 DNA DNA -8 196 120 363 222 40 10 chr2 12833704 12833803 -240422780 - MER105 DNA DNA -98 106 5 1947 269 62 31 chr2 12833832 12834736 -240421847 + HAL1 LINE L1 788 1719 -788 24 32 0 0 chr2 12834903 12834934 -240421649 + AT_rich Low_complexity Low_complexity 1 31 0 181 309 55 0 chr2 12835017 12835072 -240421511 + MIR SINE MIR 73 130 -78 194 262 0 0 chr2 12835512 12835554 -240421029 + L2 LINE L2 3219 3260 -12 548 340 60 28 chr2 12836327 12836612 -240419971 - L3 LINE CR1 -48 1529 1236 283 250 42 14 chr2 12837425 12837497 -240419086 + MIR SINE MIR 21 94 -114 573 313 63 35 chr2 12838482 12838849 -240417734 + LTR33 LTR ERVL 90 466 -55 474 291 128 0 chr2 12838949 12839027 -240417556 + MIR SINE MIR 28 95 -167 523 75 12 12 chr2 12839027 12839107 -240417476 + MADE1 DNA Mariner 1 80 0 474 291 128 0 chr2 12839107 12839207 -240417376 + MIR SINE MIR 95 229 -33 204 320 51 13 chr2 12839874 12839952 -240416631 + MIR SINE MIR 80 160 -102 2131 116 3 7 chr2 12840070 12840364 -240416219 - AluSp SINE Alu -14 299 7 26 30 0 0 chr2 12840489 12840522 -240416061 + AT_rich Low_complexity Low_complexity 1 33 0 452 264 74 7 chr2 12840633 12840781 -240415802 - MIR SINE MIR -15 247 90 1744 179 72 19 chr2 12840786 12841180 -240415403 + MLT1D LTR MaLR 6 503 -2 270 309 0 100 chr2 12841182 12841292 -240415291 - MIR SINE MIR -155 107 9 1055 235 129 62 chr2 12841415 12841876 -240414707 + MLT1H LTR MaLR 14 547 -2 447 311 87 13 chr2 12842032 12842241 -240414342 - MIR SINE MIR -31 231 12 2404 114 17 3 chr2 12842973 12843323 -240413260 - THE1A LTR MaLR 0 355 1 11139 101 23 1 chr2 12843323 12844870 -240411713 - THE1A-int LTR MaLR 0 1580 1 479 196 74 12 chr2 12845080 12845198 -240411385 + MER20B DNA MER1_type 36 159 -60 5208 209 65 41 chr2 12845285 12846629 -240409954 + L1MC3 LINE L1 5530 6912 -873 1789 155 0 31 chr2 12846629 12846948 -240409635 + AluSx SINE Alu 1 310 0 5208 209 65 41 chr2 12846948 12847021 -240409562 + L1MC3 LINE L1 6912 6982 -803 29 60 0 0 chr2 12847054 12847104 -240409479 + AT_rich Low_complexity Low_complexity 1 50 0 311 183 24 24 chr2 12847152 12847234 -240409349 + L1MC3 LINE L1 7014 7095 -690 281 237 32 32 chr2 12847234 12847327 -240409256 + MLT1F1 LTR MaLR 33 125 -442 1384 191 28 7 chr2 12847333 12847767 -240408816 + L1MC3 LINE L1 7197 7757 -28 189 0 0 0 chr2 12847767 12847788 -240408795 + (TC)n Simple_repeat Simple_repeat 2 22 0 287 224 24 0 chr2 12847788 12847873 -240408710 - L1MC4 LINE L1 -1339 6703 6617 1163 279 53 36 chr2 12848044 12848606 -240407977 + MER20B DNA MER1_type 211 782 -1 337 347 90 0 chr2 12848822 12849044 -240407539 + MLT1J2 LTR MaLR 209 450 0 259 333 101 12 chr2 12849046 12849214 -240407369 + MIR SINE MIR 56 238 -24 198 0 0 0 chr2 12850853 12850875 -240405708 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 191 337 54 22 chr2 12851694 12851786 -240404797 + L2 LINE L2 3171 3265 -7 1367 217 39 22 chr2 12852115 12852474 -240404109 - MLT1A1 LTR MaLR 0 365 1 240 272 0 86 chr2 12853134 12853215 -240403368 + MIR SINE MIR 67 140 -68 1810 169 46 25 chr2 12853643 12854010 -240402573 + THE1C LTR MaLR 1 375 0 298 267 112 0 chr2 12854845 12854961 -240401622 + L3 LINE CR1 1289 1417 -160 300 308 33 0 chr2 12855234 12855325 -240401258 + L2 LINE L2 2264 2357 -957 598 221 55 0 chr2 12855328 12855455 -240401128 + L1PB4 LINE L1 6022 6155 -1 191 36 36 0 chr2 12855458 12855486 -240401097 + (GA)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr2 12855992 12856018 -240400565 + (TG)n Simple_repeat Simple_repeat 1 26 0 23 68 0 0 chr2 12856098 12856142 -240400441 + AT_rich Low_complexity Low_complexity 1 44 0 1201 259 84 30 chr2 12856650 12857170 -240399413 + MLT1E LTR MaLR 1 593 0 493 283 28 14 chr2 12857864 12857989 -240398594 - L2 LINE L2 -5 3308 3179 2060 127 34 45 chr2 12857989 12858368 -240398215 - THE1C LTR MaLR 0 375 1 493 283 28 14 chr2 12858368 12858387 -240398196 - L2 LINE L2 -134 3179 3162 732 276 44 27 chr2 12859628 12859921 -240396662 - MER20B DNA MER1_type -288 495 198 2258 61 20 20 chr2 12860116 12860413 -240396170 - AluY SINE Alu -14 297 1 27 49 0 0 chr2 12860492 12860533 -240396050 + AT_rich Low_complexity Low_complexity 1 41 0 1418 222 11 3 chr2 12860533 12860817 -240395766 - AluJo SINE Alu -16 286 1 1213 93 114 41 chr2 12860822 12861068 -240395515 - L1MA8 LINE L1 -3 6288 6025 14264 143 17 8 chr2 12861391 12863787 -240392796 + Tigger1 DNA MER2_type 1 2417 -1 1367 132 30 8 chr2 12864007 12864242 -240392341 - L1MA9 LINE L1 -1 6311 6072 1165 313 79 34 chr2 12864722 12864779 -240391804 - LTR16C LTR ERVL 0 491 438 1552 195 45 25 chr2 12864779 12865133 -240391450 - MLT1A1 LTR MaLR 0 365 5 1165 313 79 34 chr2 12865133 12865544 -240391039 - LTR16C LTR ERVL -53 438 2 25 31 0 0 chr2 12867145 12867177 -240389406 + AT_rich Low_complexity Low_complexity 1 32 0 352 306 47 12 chr2 12867426 12867596 -240388987 + MIR SINE MIR 79 254 -8 234 341 0 11 chr2 12867602 12867690 -240388893 + CT-rich Low_complexity Low_complexity 1 87 0 1934 93 0 8 chr2 12867723 12867992 -240388591 + AluSc SINE Alu 37 303 0 206 347 112 0 chr2 12868028 12868126 -240388457 - L2 LINE L2 -12 3301 3193 * 209 355 73 0 chr2 12868093 12868217 -240388366 + MIR SINE MIR 95 227 -35 261 163 0 0 chr2 12868610 12868659 -240387924 + (TG)n Simple_repeat Simple_repeat 2 50 0 725 133 0 0 chr2 12868987 12869092 -240387491 - MSTA LTR MaLR -323 105 1 260 173 0 0 chr2 12869642 12869694 -240386889 + L1MC4 LINE L1 6652 6703 -1339 327 164 0 0 chr2 12869694 12869755 -240386828 + (CATA)n Simple_repeat Simple_repeat 4 64 0 201 341 0 0 chr2 12869769 12869851 -240386732 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 552 309 106 29 chr2 12869898 12870312 -240386271 - MLT1J1 LTR MaLR 0 446 1 1510 156 66 43 chr2 12870578 12870879 -240385704 + AluSg SINE Alu 1 308 -2 25 31 0 0 chr2 12871925 12871957 -240384626 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 12872425 12872446 -240384137 + AT_rich Low_complexity Low_complexity 1 21 0 269 358 16 16 chr2 12872787 12872910 -240383673 - L2 LINE L2 -554 2760 2638 209 198 210 25 chr2 12875153 12875234 -240381349 - MIR SINE MIR -70 138 43 190 270 34 67 chr2 12875269 12875358 -240381225 - L2 LINE L2 -8 3264 3179 315 154 10 48 chr2 12876146 12876250 -240380333 + A-rich Low_complexity Low_complexity 1 100 0 321 281 7 44 chr2 12876264 12876399 -240380184 + L2 LINE L2 2829 2958 -355 332 273 18 92 chr2 12876422 12876649 -240379934 + L2 LINE L2 3077 3286 -27 346 321 25 56 chr2 12877106 12877302 -240379281 + MIR3 SINE MIR 13 202 -6 198 0 0 0 chr2 12878577 12878599 -240377984 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 227 253 0 0 chr2 12880255 12880330 -240376253 + L1MC4 LINE L1 6629 6703 -1339 272 200 14 0 chr2 12880421 12880491 -240376092 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 384 313 67 0 chr2 12881109 12881243 -240375340 + MIR SINE MIR 103 245 -17 221 146 21 0 chr2 12881256 12881304 -240375279 + (CA)n Simple_repeat Simple_repeat 1 49 0 207 0 0 0 chr2 12881597 12881620 -240374963 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5487 149 8 42 chr2 12882041 12882773 -240373810 - L1MA4A LINE L1 -14 6289 5603 1884 126 3 50 chr2 12882773 12883090 -240373493 + AluSx SINE Alu 9 310 -2 5487 149 8 42 chr2 12883090 12883429 -240373154 - L1MA4A LINE L1 -700 5603 5254 270 274 12 24 chr2 12883528 12883612 -240372971 + MLT1L LTR MaLR 3 85 -530 309 284 55 0 chr2 12884187 12884314 -240372269 - MIR SINE MIR -56 206 73 317 322 97 40 chr2 12884383 12884654 -240371929 + L2 LINE L2 2766 3083 -189 199 364 34 11 chr2 12884737 12884825 -240371758 + MER5A DNA MER1_type 82 171 -18 509 301 38 25 chr2 12886971 12887454 -240369129 + L1MCc LINE L1 1167 1816 -5125 257 299 64 72 chr2 12887462 12887823 -240368760 + L1MCc LINE L1 1960 2317 -4624 14932 154 33 15 chr2 12887860 12890529 -240366054 + Tigger2 DNA MER2_type 1 2718 0 198 236 0 0 chr2 12890590 12890645 -240365938 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 439 269 83 19 chr2 12890656 12890872 -240365711 + L1ME2 LINE L1 5254 5483 -681 373 312 19 26 chr2 12890876 12891030 -240365553 + LTR52 LTR ERVL 132 284 -137 1820 253 62 29 chr2 12891084 12891741 -240364842 + L1ME2 LINE L1 5479 6157 -7 785 232 121 10 chr2 12893036 12893234 -240363349 - MER58A DNA MER1_type -2 222 3 187 341 57 0 chr2 12893797 12893885 -240362698 + L2 LINE L2 2307 2399 -915 462 223 14 93 chr2 12894160 12894247 -240362336 + MLT1H LTR MaLR 53 127 -422 2045 106 0 48 chr2 12894247 12894558 -240362025 - AluSx SINE Alu -12 300 5 462 223 14 93 chr2 12894558 12894609 -240361974 + MLT1H LTR MaLR 127 180 -369 468 173 15 25 chr2 12894609 12894805 -240361778 + GA-rich Low_complexity Low_complexity 1 194 0 1326 197 27 17 chr2 12894960 12895255 -240361328 - AluJo SINE Alu 0 312 15 22 0 0 0 chr2 12895877 12895899 -240360684 + AT_rich Low_complexity Low_complexity 1 22 0 248 338 119 6 chr2 12896181 12896341 -240360242 - MIR SINE MIR 0 262 85 1110 187 51 129 chr2 12897612 12898007 -240358576 - MLT1A1 LTR MaLR -1 364 1 182 280 80 0 chr2 12898397 12898447 -240358136 - MIR SINE MIR -64 144 91 1989 137 0 35 chr2 12898665 12898980 -240357603 + AluSx SINE Alu 1 304 -8 375 101 0 17 chr2 12898999 12899066 -240357517 - AluSp SINE Alu -9 292 241 457 103 0 134 chr2 12899066 12899163 -240357420 - AluSp SINE Alu -160 153 70 275 321 141 21 chr2 12899860 12900150 -240356433 - L2 LINE L2 -675 2639 2315 337 211 43 31 chr2 12900227 12900388 -240356195 + (TA)n Simple_repeat Simple_repeat 1 163 0 264 66 50 94 chr2 12900493 12900674 -240355909 + (TATAA)n Simple_repeat Simple_repeat 4 176 0 434 79 92 6 chr2 12901133 12901297 -240355286 + (TA)n Simple_repeat Simple_repeat 2 179 0 61 15 0 0 chr2 12901297 12901365 -240355218 + AT_rich Low_complexity Low_complexity 1 68 0 2262 269 93 55 chr2 12901998 12904185 -240352398 + L1ME3 LINE L1 2923 5201 -945 2428 69 3 0 chr2 12904185 12904488 -240352095 + AluY SINE Alu 1 304 -7 2262 269 93 55 chr2 12904488 12904561 -240352022 + L1ME3 LINE L1 5201 5270 -876 180 245 0 0 chr2 12904572 12904625 -240351958 + (TA)n Simple_repeat Simple_repeat 1 53 0 27 29 0 0 chr2 12904641 12904675 -240351908 + AT_rich Low_complexity Low_complexity 1 34 0 1352 261 125 39 chr2 12904727 12905482 -240351101 + L1ME3 LINE L1 5267 6100 -70 989 90 0 0 chr2 12905482 12905616 -240350967 + L1PA10 LINE L1 6031 6164 -4 1352 261 125 39 chr2 12905616 12905686 -240350897 + L1ME3 LINE L1 6100 6163 -7 204 340 97 40 chr2 12905691 12906020 -240350563 - L2 LINE L2 -1300 2014 1667 391 52 0 52 chr2 12906044 12906102 -240350481 - MLT2A1 LTR ERVL 0 453 399 224 233 0 0 chr2 12906118 12906161 -240350422 + (CATATA)n Simple_repeat Simple_repeat 2 44 0 2460 93 77 8 chr2 12906162 12906538 -240350045 - MLT2A1 LTR ERVL -40 404 3 58 13 0 13 chr2 12907852 12907877 -240348706 + AT_rich Low_complexity Low_complexity 1 25 -50 1989 122 7 3 chr2 12907877 12908165 -240348418 + AluSp SINE Alu 1 289 -24 58 13 0 13 chr2 12908165 12908215 -240348368 + AT_rich Low_complexity Low_complexity 25 75 0 300 318 95 0 chr2 12908993 12909119 -240347464 + MIR SINE MIR 49 186 -76 426 235 29 0 chr2 12909659 12909761 -240346822 - L1MB8 LINE L1 -200 5978 5874 2566 231 45 6 chr2 12909790 12910487 -240346096 - L1MB8 LINE L1 -1049 5097 4374 24296 178 17 23 chr2 12910493 12911602 -240344981 + L1PA12 LINE L1 8 1123 -6446 183 42 0 0 chr2 12911602 12911626 -240344957 + (CAA)n Simple_repeat Simple_repeat 1 24 0 24296 178 17 23 chr2 12911626 12912590 -240343993 + L1PA12 LINE L1 1123 2092 -5477 2357 93 7 0 chr2 12912590 12912891 -240343692 - AluSq SINE Alu -4 309 7 24296 178 17 23 chr2 12912891 12914692 -240341891 + L1PA12 LINE L1 2092 3903 -3666 207 0 0 0 chr2 12914692 12914715 -240341868 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 24296 178 17 23 chr2 12914715 12916673 -240339910 + L1PA12 LINE L1 3903 7112 -457 307 255 168 37 chr2 12917665 12917826 -240338757 + MIR SINE MIR 49 230 -32 1911 154 3 3 chr2 12918054 12918346 -240338237 + AluSx SINE Alu 8 299 -13 350 321 64 32 chr2 12919328 12919460 -240337123 + L1ME3 LINE L1 3718 3844 -2302 2063 159 27 30 chr2 12919460 12919825 -240336758 - THE1B LTR MaLR 0 364 1 350 321 64 32 chr2 12919825 12920100 -240336483 + L1ME3 LINE L1 3844 4138 -2008 21 0 0 0 chr2 12920103 12920124 -240336459 + AT_rich Low_complexity Low_complexity 1 21 0 488 310 125 53 chr2 12920161 12920842 -240335741 + L1ME3 LINE L1 4205 4964 -1182 414 0 0 0 chr2 12920846 12920892 -240335691 + (CA)n Simple_repeat Simple_repeat 2 47 0 319 291 119 64 chr2 12920895 12921222 -240335361 + L1ME3 LINE L1 5002 5346 -800 394 264 53 120 chr2 12921248 12921756 -240334827 + L1ME3 LINE L1 5381 5854 -308 2296 86 0 0 chr2 12922169 12922459 -240334124 - AluSc SINE Alu -19 290 1 1097 235 87 26 chr2 12923947 12924407 -240332176 - Charlie2 DNA MER1_type -47 2815 2328 664 222 79 0 chr2 12924593 12924809 -240331774 - Charlie2a DNA MER1_type -1851 1011 779 283 91 400 0 chr2 12924812 12924867 -240331716 + MADE1 DNA Mariner 4 80 0 2182 132 83 5 chr2 12924935 12925321 -240331262 + MSTA LTR MaLR 1 416 -12 359 256 16 31 chr2 12925333 12925462 -240331121 - Charlie2a DNA MER1_type -2191 591 465 732 112 0 0 chr2 12925975 12926082 -240330501 + AluSg SINE Alu 1 107 -203 2330 95 0 0 chr2 12926099 12926405 -240330178 + AluY SINE Alu 1 306 -5 221 298 87 19 chr2 12926579 12926683 -240329900 - L2 LINE L2 -41 3231 3121 274 313 0 26 chr2 12928259 12928394 -240328189 + MIR3 SINE MIR 3 176 -32 22 0 0 0 chr2 12928482 12928504 -240328079 + AT_rich Low_complexity Low_complexity 1 22 0 336 303 35 35 chr2 12928657 12928802 -240327781 - L2 LINE L2 -1 3312 3168 1631 214 70 20 chr2 12929004 12929444 -240327139 - MLT1C LTR MaLR 0 467 6 322 278 76 49 chr2 12930579 12930723 -240325860 - MER91A DNA MER1_type -29 167 20 271 296 134 0 chr2 12930998 12931140 -240325443 + MIR SINE MIR 48 208 -54 2527 68 0 0 chr2 12931631 12931955 -240324628 + L1PA5 LINE L1 5831 6154 0 2141 199 83 6 chr2 12932731 12933223 -240323360 + L1MD2 LINE L1 5428 5957 -402 7215 170 38 6 chr2 12933269 12935667 -240320916 - L1MA4 LINE L1 -11 6289 3811 186 43 0 0 chr2 12986462 12986485 -240270098 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 302 167 0 0 chr2 12986489 12986543 -240270040 - L1MA6 LINE L1 -13 6287 6234 3483 213 21 18 chr2 12986545 12987569 -240269014 - L1MA6 LINE L1 -248 6052 5017 * 5178 144 53 19 chr2 12987566 12988482 -240268101 - THE1C-int LTR MaLR -632 948 1 1363 145 84 95 chr2 12988482 12988861 -240267722 - THE1C LTR MaLR 0 375 1 1736 278 44 29 chr2 12988861 12989379 -240267204 - L1M3b LINE L1 -5755 526 1 2056 126 48 28 chr2 12989473 12989830 -240266753 + THE1B LTR MaLR 1 364 0 21 82 0 0 chr2 12989934 12989983 -240266600 + AT_rich Low_complexity Low_complexity 1 49 0 1200 214 58 79 chr2 12990165 12990347 -240266236 - MLT1A2 LTR MaLR 0 374 190 366 23 0 0 chr2 12990347 12990390 -240266193 + (TG)n Simple_repeat Simple_repeat 1 43 0 1200 214 58 79 chr2 12990390 12990585 -240265998 - MLT1A2 LTR MaLR -184 190 5 2290 229 4 17 chr2 12991063 12991539 -240265044 - MER70A LTR ERVL -2 470 1 187 273 189 38 chr2 12992085 12992217 -240264366 + MIR3 SINE MIR 42 193 -15 216 250 18 0 chr2 12992537 12992593 -240263990 + (CACCC)n Simple_repeat Simple_repeat 1 57 0 183 314 86 71 chr2 12992636 12992846 -240263737 + MIR SINE MIR 50 262 0 256 145 16 16 chr2 12994201 12994263 -240262320 + (TA)n Simple_repeat Simple_repeat 2 63 0 304 297 75 82 chr2 12994294 12994937 -240261646 - L1MC/D LINE L1 -470 5651 5266 1330 181 140 16 chr2 12995262 12995627 -240260956 + MER65A LTR ERV1 23 432 -13 596 337 70 22 chr2 12995668 12996223 -240260360 - L1MC/D LINE L1 -1249 4897 4316 735 226 132 116 chr2 12997068 12997584 -240258999 + MLT1F1 LTR MaLR 3 567 0 663 296 47 19 chr2 12998041 12998254 -240258329 + MER58A DNA MER1_type 4 222 -2 362 343 63 38 chr2 12998590 12998905 -240257678 - MLT1H LTR MaLR -198 351 29 2200 143 19 11 chr2 13000274 13000646 -240255937 + THE1C LTR MaLR 1 375 0 332 317 41 0 chr2 13000952 13001075 -240255508 - MIR SINE MIR -48 214 87 938 244 15 29 chr2 13001480 13001754 -240254829 - MLT1C LTR MaLR -194 273 4 185 388 0 15 chr2 13001786 13001853 -240254730 + L3b LINE CR1 1501 1566 -17 249 83 0 0 chr2 13002234 13002270 -240254313 + (TG)n Simple_repeat Simple_repeat 2 37 0 263 390 94 0 chr2 13002696 13002855 -240253728 - MIR SINE MIR -44 218 45 396 40 0 0 chr2 13002954 13003004 -240253579 + (TG)n Simple_repeat Simple_repeat 1 50 0 791 263 87 76 chr2 13003321 13003826 -240252757 - MLT2B3 LTR ERVL -20 534 21 1312 246 25 17 chr2 13003826 13004188 -240252395 + MLT1A1 LTR MaLR 1 365 0 791 263 87 76 chr2 13004188 13004210 -240252373 - MLT2B3 LTR ERVL -533 21 1 425 248 55 0 chr2 13005895 13006004 -240250579 + MIR SINE MIR 89 203 -59 407 76 51 38 chr2 13006004 13006083 -240250500 + L1MB7 LINE L1 6104 6183 -1 180 0 0 0 chr2 13006778 13006798 -240249785 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2327 67 0 7 chr2 13007370 13007687 -240248896 + AluY SINE Alu 3 311 0 236 336 69 0 chr2 13007772 13007903 -240248680 - MIR SINE MIR -42 220 81 199 166 178 0 chr2 13008161 13008217 -240248366 - MIR SINE MIR -65 143 84 333 82 0 0 chr2 13008316 13008365 -240248218 + (TATAG)n Simple_repeat Simple_repeat 2 50 0 1120 300 58 33 chr2 13009040 13009736 -240246847 + HAL1 LINE L1 1482 2194 -313 316 216 5 146 chr2 13009737 13009922 -240246661 + HAL1 LINE L1 2324 2482 -25 26 64 0 0 chr2 13011152 13011199 -240245384 + AT_rich Low_complexity Low_complexity 1 47 0 180 323 20 50 chr2 13011529 13011628 -240244955 - MIR SINE MIR -92 116 21 1337 228 0 0 chr2 13011811 13012079 -240244504 + MLT1A1 LTR MaLR 1 268 -97 4328 82 39 3 chr2 13012390 13013014 -240243569 - L1P LINE L1 -1726 4420 3775 187 306 97 0 chr2 13013177 13013239 -240243344 - L2 LINE L2 -89 3183 3116 1805 156 26 0 chr2 13013247 13013549 -240243034 + AluSx SINE Alu 1 310 -2 700 198 0 11 chr2 13013877 13014059 -240242524 + GA-rich Low_complexity Low_complexity 1 180 0 266 333 68 14 chr2 13017757 13017979 -240238604 + L1ME LINE L1 4553 4786 -1360 1872 155 137 11 chr2 13018162 13018542 -240238041 + MSTA LTR MaLR 1 428 0 8619 156 16 36 chr2 13018544 13020151 -240236432 + MSTA-int LTR MaLR 3 1576 -4 1976 146 125 18 chr2 13020155 13020540 -240236043 + MSTA LTR MaLR 1 426 -2 2513 181 42 9 chr2 13020628 13021169 -240235414 - L1PB4 LINE L1 0 6156 5598 378 372 41 11 chr2 13021287 13021655 -240234928 + L1ME LINE L1 5258 5636 -526 451 366 71 17 chr2 13021690 13021985 -240234598 - L2 LINE L2 -8 3305 2995 826 300 63 101 chr2 13022023 13022909 -240233674 - L2 LINE L2 -420 2894 2042 31 88 0 0 chr2 13023387 13023467 -240233116 + AT_rich Low_complexity Low_complexity 1 80 0 2215 198 15 22 chr2 13023620 13024080 -240232503 + MSTB2 LTR MaLR 1 457 0 2488 205 71 79 chr2 13024080 13024854 -240231729 + MSTB2-int LTR MaLR 2 769 -882 1028 208 0 0 chr2 13024854 13025051 -240231532 + MLT1A1 LTR MaLR 261 457 0 229 320 95 0 chr2 13025276 13025423 -240231160 + L1ME LINE L1 5651 5811 -310 40 37 0 0 chr2 13025477 13025531 -240231052 + AT_rich Low_complexity Low_complexity 1 54 0 840 182 72 8 chr2 13026104 13026340 -240230243 - MER33 DNA MER1_type -19 305 55 1621 189 34 10 chr2 13026408 13026705 -240229878 - AluJb SINE Alu -8 304 1 264 235 44 81 chr2 13026706 13026842 -240229741 - MER104 DNA Tc2 -42 138 8 342 333 60 51 chr2 13027044 13027278 -240229305 - MLT1K LTR MaLR -234 354 119 326 279 0 74 chr2 13029136 13029258 -240227325 + MER74B LTR ERVL 70 182 -440 272 24 0 48 chr2 13029266 13029308 -240227275 + (TTA)n Simple_repeat Simple_repeat 3 42 0 7016 40 0 11 chr2 13029308 13030169 -240226414 - L1PA5 LINE L1 -18 6136 5285 366 285 44 44 chr2 13030172 13030309 -240226274 + MER74B LTR ERVL 380 516 -106 25 0 0 0 chr2 13030461 13030486 -240226097 + AT_rich Low_complexity Low_complexity 1 25 0 297 241 46 11 chr2 13030759 13030846 -240225737 + MLT1J2 LTR MaLR 66 155 -295 1690 252 65 55 chr2 13031051 13031994 -240224589 - L1MC5 LINE L1 -55 7906 6955 1529 246 56 27 chr2 13032203 13032682 -240223901 - L1MC5 LINE L1 -2007 5801 5309 28 29 0 0 chr2 13033073 13033108 -240223475 + AT_rich Low_complexity Low_complexity 1 35 0 2132 183 44 12 chr2 13034219 13034624 -240221959 - MER47B DNA MER2_type 0 418 1 2626 38 0 10 chr2 13035012 13035326 -240221257 - AluY SINE Alu 0 311 1 29 28 0 0 chr2 13035326 13035362 -240221221 + AT_rich Low_complexity Low_complexity 1 36 0 387 231 56 50 chr2 13035415 13035575 -240221008 - L1MC5 LINE L1 -1465 4681 4521 277 276 172 5 chr2 13035666 13035869 -240220714 + L1M4 LINE L1 3515 3751 -2395 593 156 0 0 chr2 13035869 13035959 -240220624 + 7SLRNA srpRNA srpRNA 213 302 -18 198 0 0 0 chr2 13035959 13035981 -240220602 + (TAA)n Simple_repeat Simple_repeat 2 23 0 271 261 93 35 chr2 13035989 13036299 -240220284 + L1M4 LINE L1 3760 4087 -2059 745 249 31 55 chr2 13036327 13036708 -240219875 + L1M4 LINE L1 4222 4593 -1553 191 233 23 0 chr2 13037513 13037556 -240219027 + MER5A DNA MER1_type 111 154 -35 23 33 0 0 chr2 13037556 13037586 -240218997 + AT_rich Low_complexity Low_complexity 1 30 0 269 321 42 71 chr2 13038076 13038244 -240218339 - MIR3 SINE MIR -43 165 3 186 43 0 0 chr2 13038533 13038556 -240218027 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 428 135 34 0 chr2 13038559 13038648 -240217935 - L1MA7 LINE L1 -2 6289 6198 411 83 0 0 chr2 13039284 13039344 -240217239 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 619 337 108 28 chr2 13039344 13040474 -240216109 + L1ME3A LINE L1 4143 5392 -772 2207 120 0 0 chr2 13040474 13040774 -240215809 - AluSq SINE Alu -13 300 1 619 337 108 28 chr2 13040774 13040871 -240215712 + L1ME3A LINE L1 5392 5480 -684 245 353 73 10 chr2 13041041 13041330 -240215253 + L1ME3A LINE L1 5645 5951 -219 180 0 0 0 chr2 13043141 13043161 -240213422 + (TTAA)n Simple_repeat Simple_repeat 2 21 0 772 293 67 62 chr2 13043190 13043791 -240212792 - L2 LINE L2 0 3313 2723 180 174 0 87 chr2 13044402 13044448 -240212135 - MIR SINE MIR -10 252 211 1395 201 119 49 chr2 13046195 13046667 -240209916 - MLT1D LTR MaLR 0 505 1 435 282 28 93 chr2 13047056 13047347 -240209236 - L2 LINE L2 -79 3234 2963 230 288 76 30 chr2 13048370 13048436 -240208147 + L2 LINE L2 3197 3265 -48 313 350 21 21 chr2 13048975 13049118 -240207465 - MIR SINE MIR -100 162 20 204 260 57 8 chr2 13049645 13049737 -240206846 - MIR SINE MIR -62 146 52 2148 109 20 0 chr2 13049984 13050288 -240206295 + AluSp SINE Alu 1 310 -3 301 369 95 5 chr2 13050551 13050773 -240205810 + MIR SINE MIR 6 247 -15 289 351 16 16 chr2 13050966 13051208 -240205375 + L1MEc LINE L1 36 277 -6119 1955 125 4 0 chr2 13051609 13051881 -240204702 + AluSx SINE Alu 3 275 -37 235 0 0 54 chr2 13051885 13051922 -240204661 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 479 234 24 102 chr2 13052107 13052441 -240204142 + L1MEc LINE L1 825 1132 -5073 1331 150 87 113 chr2 13052662 13053122 -240203461 - LTR7 LTR ERV1 -2 448 1 2362 95 48 13 chr2 13053122 13053501 -240203082 - HERVH LTR ERV1 0 7713 7322 1391 123 18 14 chr2 13053499 13053718 -240202865 - HERVH LTR ERV1 -1894 5819 5600 * 2422 143 38 0 chr2 13053719 13054112 -240202471 - HERVH LTR ERV1 -2564 5149 4742 1138 137 16 0 chr2 13054161 13054351 -240202232 - HERVH LTR ERV1 -4726 2987 2795 * 1685 100 59 0 chr2 13054349 13054588 -240201995 - HERVH LTR ERV1 -2973 4740 4488 3239 122 8 6 chr2 13054590 13055091 -240201492 - HERVH LTR ERV1 -3720 3993 3492 947 133 7 0 chr2 13055081 13055231 -240201352 - HERVH LTR ERV1 -4423 3290 3140 * 19960 102 21 5 chr2 13055225 13058165 -240198418 - HERVH LTR ERV1 -4726 2987 1 1272 145 95 124 chr2 13058167 13058628 -240197955 - LTR7 LTR ERV1 -2 448 1 233 0 62 0 chr2 13059298 13059330 -240197253 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1399 244 7 3 chr2 13059613 13059908 -240196675 + MLT2B1 LTR ERVL 1 296 -224 191 236 214 22 chr2 13059990 13060079 -240196504 - MIR SINE MIR -85 177 72 3717 292 81 52 chr2 13061413 13063236 -240193347 - L1ME2 LINE L1 -304 6655 4887 255 100 183 0 chr2 13063236 13063296 -240193287 + LTR52 LTR ERVL 19 89 -332 3717 292 81 52 chr2 13063296 13064125 -240192458 - L1ME2 LINE L1 -2072 4887 4084 2187 210 92 76 chr2 13064125 13064938 -240191645 - LTR1B LTR ERV1 0 826 1 3717 292 81 52 chr2 13064938 13065413 -240191170 - L1ME2 LINE L1 -2875 4084 3624 1819 161 58 19 chr2 13065413 13065774 -240190809 - THE1C LTR MaLR 0 375 1 9246 131 38 40 chr2 13065774 13067357 -240189226 - THE1C-int LTR MaLR 0 1580 2 1914 140 80 11 chr2 13067358 13067709 -240188874 - THE1C LTR MaLR 0 375 1 3717 292 81 52 chr2 13067709 13068072 -240188511 - L1ME2 LINE L1 -3334 3625 2998 886 279 49 21 chr2 13068073 13068500 -240188083 - L1ME2 LINE L1 -4125 2997 2559 317 218 50 30 chr2 13068682 13068783 -240187800 - L1ME2 LINE L1 -5159 1264 1162 620 342 47 4 chr2 13069427 13069661 -240186922 - HERVL40 LTR ERVL -1738 3792 3549 428 303 60 60 chr2 13070905 13071219 -240185364 - REP3 LTR ERV -54 508 195 1299 271 86 14 chr2 13071674 13072172 -240184411 - MLT1E1 LTR MaLR -114 540 7 314 298 19 10 chr2 13072584 13072688 -240183895 + MIR3 SINE MIR 89 193 -15 325 360 30 35 chr2 13073571 13073771 -240182812 + MIR SINE MIR 49 247 -15 241 286 21 83 chr2 13073864 13074056 -240182527 - REP3 LTR ERV -218 344 165 630 345 84 35 chr2 13075350 13076054 -240180529 + HAL1b LINE L1 62 799 -549 255 392 40 8 chr2 13076288 13076413 -240180170 + MER5A DNA MER1_type 52 180 -9 848 231 0 0 chr2 13077017 13077177 -240179406 + AluJb SINE Alu 129 288 -24 1014 203 5 15 chr2 13078293 13078495 -240178088 - AluJo SINE Alu -19 293 94 207 279 81 45 chr2 13079567 13079678 -240176905 - L2 LINE L2 -151 3121 3007 366 42 0 0 chr2 13079746 13079794 -240176789 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1364 48 0 0 chr2 13079806 13079973 -240176610 - L1PA4 LINE L1 -8 6147 5981 434 245 20 10 chr2 13080016 13080114 -240176469 - MER81 DNA DNA -1 113 15 754 232 80 77 chr2 13080143 13080505 -240176078 - MLT1F1 LTR MaLR -140 427 65 1793 155 3 23 chr2 13080735 13081038 -240175545 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 13081193 13081215 -240175368 + AT_rich Low_complexity Low_complexity 1 22 0 1206 186 122 32 chr2 13081634 13081945 -240174638 - MER44D DNA MER2_type 0 609 1 590 243 59 76 chr2 13082150 13082487 -240174096 + MER57A LTR ERV1 103 403 0 244 300 0 0 chr2 13082817 13082887 -240173696 - MIR SINE MIR -114 148 79 224 291 78 15 chr2 13083742 13083865 -240172718 - MIR SINE MIR -63 145 34 22 56 0 0 chr2 13084489 13084525 -240172058 + AT_rich Low_complexity Low_complexity 1 36 0 207 0 0 0 chr2 13085019 13085042 -240171541 + (TG)n Simple_repeat Simple_repeat 2 24 0 190 372 64 0 chr2 13085902 13085996 -240170587 + L2 LINE L2 2175 2274 -1040 1432 108 78 13 chr2 13086126 13086358 -240170225 - L1PA13 LINE L1 -3 6160 5914 212 197 0 30 chr2 13087735 13087801 -240168782 + (TGAA)n Simple_repeat Simple_repeat 2 65 0 431 293 98 76 chr2 13089988 13090437 -240166146 + L1ME LINE L1 536 1015 -5055 1929 161 16 16 chr2 13090437 13090810 -240165773 - THE1C LTR MaLR -2 373 1 431 293 98 76 chr2 13090810 13090946 -240165637 + L1ME LINE L1 1015 1146 -4924 2188 113 0 10 chr2 13091350 13091660 -240164923 + AluSx SINE Alu 1 307 -5 496 242 11 68 chr2 13091750 13091940 -240164643 + L1MA9 LINE L1 6093 6271 -41 226 309 72 28 chr2 13092052 13092233 -240164350 + L1ME LINE L1 2312 2500 -3580 920 140 7 33 chr2 13092262 13092412 -240164171 + Tigger3(Golem) DNA MER2_type 2886 3031 0 1034 292 71 38 chr2 13092421 13093263 -240163320 - L1M4 LINE L1 -778 5368 4499 340 301 99 40 chr2 13093305 13093710 -240162873 - L1M4 LINE L1 -1838 4308 3880 2400 117 96 0 chr2 13093741 13094125 -240162458 + MSTA LTR MaLR 1 421 -7 8824 178 36 13 chr2 13094133 13095556 -240161027 + MSTA-int LTR MaLR 2 1469 -182 1993 129 0 7 chr2 13095556 13095879 -240160704 + AluSx SINE Alu 1 321 0 8824 178 36 13 chr2 13095879 13096062 -240160521 + MSTA-int LTR MaLR 1469 1646 -5 1873 157 144 5 chr2 13096068 13096443 -240160140 + MSTA LTR MaLR 1 427 -1 251 276 43 26 chr2 13096655 13096771 -240159812 - L1M4 LINE L1 -2532 3614 3497 245 330 18 18 chr2 13096919 13097028 -240159555 - MER81 DNA DNA -5 109 1 22 0 0 0 chr2 13097140 13097162 -240159421 + AT_rich Low_complexity Low_complexity 1 22 0 227 309 41 0 chr2 13097296 13097393 -240159190 + HAL1b LINE L1 261 361 -987 374 300 122 15 chr2 13097407 13097677 -240158906 + L1ME4a LINE L1 4549 4847 -1299 1068 267 92 101 chr2 13097744 13098984 -240157599 + L1MC4 LINE L1 6809 8037 -5 372 287 38 73 chr2 13099176 13099389 -240157194 + L1ME4a LINE L1 5629 5829 -333 12729 150 59 4 chr2 13099389 13101682 -240154901 + Tigger1 DNA MER2_type 1 2418 0 372 287 38 73 chr2 13101682 13101785 -240154798 + L1ME4a LINE L1 5829 5934 -228 772 273 64 93 chr2 13102027 13102673 -240153910 + MLT1G LTR MaLR 4 590 0 2124 142 14 19 chr2 13103034 13103400 -240153183 - THE1B LTR MaLR 0 364 1 11089 112 10 2 chr2 13103402 13104964 -240151619 - THE1B-int LTR MaLR -5 1575 1 2166 148 3 27 chr2 13104964 13105337 -240151246 - THE1B LTR MaLR 0 364 1 31 88 0 0 chr2 13105528 13105608 -240150975 + AT_rich Low_complexity Low_complexity 1 80 0 31 0 0 0 chr2 13105702 13105733 -240150850 + AT_rich Low_complexity Low_complexity 1 31 0 243 277 39 23 chr2 13105872 13106002 -240150581 + L1ME4a LINE L1 5969 6100 -21 1523 143 4 4 chr2 13106064 13106316 -240150267 - AluSq SINE Alu 0 307 56 483 309 43 35 chr2 13106440 13106696 -240149887 - MIR SINE MIR 0 262 5 246 291 93 23 chr2 13106703 13106789 -240149794 + L2 LINE L2 3220 3311 -2 1929 172 48 54 chr2 13107554 13108195 -240148388 + Tigger3(Golem) DNA MER2_type 1 3027 -2 327 96 0 0 chr2 13109500 13109552 -240147031 + (CA)n Simple_repeat Simple_repeat 2 53 0 413 328 95 12 chr2 13109743 13109984 -240146599 + MIR SINE MIR 2 262 0 198 0 0 0 chr2 13112278 13112300 -240144283 + (T)n Simple_repeat Simple_repeat 1 22 0 198 0 0 0 chr2 13113319 13113341 -240143242 + (T)n Simple_repeat Simple_repeat 1 22 0 417 54 0 0 chr2 13113914 13113970 -240142613 + (CA)n Simple_repeat Simple_repeat 2 57 0 437 275 30 8 chr2 13114022 13114153 -240142430 + MIR SINE MIR 11 144 -118 569 81 79 3 chr2 13114969 13115293 -240141290 + (TA)n Simple_repeat Simple_repeat 1 348 0 234 346 13 13 chr2 13116331 13116409 -240140174 - MER5A DNA MER1_type -104 85 8 229 0 83 0 chr2 13116960 13116996 -240139587 + T-rich Low_complexity Low_complexity 2 40 0 909 166 0 0 chr2 13116998 13117143 -240139440 - AluJb SINE Alu -31 281 137 274 254 0 17 chr2 13117148 13117207 -240139376 - AluS SINE Alu -239 61 4 624 14 0 0 chr2 13117387 13117460 -240139123 + (CA)n Simple_repeat Simple_repeat 1 73 0 1464 218 124 47 chr2 13117506 13118230 -240138353 - LTR1B LTR ERV1 0 826 7 553 333 27 18 chr2 13119043 13119268 -240137315 + MIR SINE MIR 8 234 -28 187 371 82 44 chr2 13119898 13120192 -240136391 - L2 LINE L2 -607 2707 2403 188 135 27 0 chr2 13120763 13120800 -240135783 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 317 269 70 39 chr2 13121122 13121278 -240135305 - L1MC4a LINE L1 -1878 5930 5770 310 224 41 15 chr2 13121560 13121759 -240134824 + L1ME LINE L1 5265 5505 -661 476 281 27 32 chr2 13121759 13121980 -240134603 + L1MC4 LINE L1 6824 7043 -999 2084 84 29 3 chr2 13122251 13122561 -240134022 + L1PA13 LINE L1 5846 6163 0 612 234 122 70 chr2 13122654 13123020 -240133563 + MLT1D LTR MaLR 27 419 -48 409 261 141 29 chr2 13123223 13123529 -240133054 + L1M4 LINE L1 3635 3974 -2172 382 22 0 0 chr2 13124190 13124236 -240132347 - MADE1 DNA Mariner -34 46 1 331 315 82 14 chr2 13124285 13124431 -240132152 - MLT1K LTR MaLR -371 217 62 289 298 36 41 chr2 13125049 13125172 -240131411 - MIR SINE MIR -37 171 49 553 289 0 0 chr2 13125176 13125304 -240131279 - Tigger1 DNA MER2_type 0 2418 2291 3650 150 38 42 chr2 13125405 13125699 -240130884 - Tigger1 DNA MER2_type -671 1747 1453 7226 33 0 0 chr2 13125699 13126906 -240129677 - L1PA4 LINE L1 -1 6154 4989 3650 150 38 42 chr2 13126906 13127263 -240129320 - Tigger1 DNA MER2_type -965 1453 1097 2398 122 14 3 chr2 13127263 13127623 -240128960 - THE1B LTR MaLR 0 364 1 3650 150 38 42 chr2 13127623 13127652 -240128931 - Tigger1 DNA MER2_type -1321 1097 1069 3692 110 30 11 chr2 13127660 13128172 -240128411 - L1PA11 LINE L1 0 6174 5648 2106 142 19 27 chr2 13128172 13128539 -240128044 - THE1B LTR MaLR 0 364 1 3692 110 30 11 chr2 13128539 13128597 -240127986 - L1PA11 LINE L1 -526 5648 5593 4738 180 46 8 chr2 13128597 13129481 -240127102 - Tigger1 DNA MER2_type -1500 918 1 217 219 0 0 chr2 13129791 13129832 -240126751 + (TG)n Simple_repeat Simple_repeat 2 42 0 25 0 0 0 chr2 13130115 13130140 -240126443 + AT_rich Low_complexity Low_complexity 1 25 0 313 228 13 0 chr2 13131659 13131738 -240124845 - MER116 DNA Mariner 0 80 1 415 277 66 52 chr2 13132717 13132964 -240123619 + MIR SINE MIR 5 249 -13 341 286 16 87 chr2 13133375 13133560 -240123023 + MIR SINE MIR 49 220 -42 202 301 30 66 chr2 13133750 13133916 -240122667 - L2 LINE L2 -44 3269 3110 386 234 43 58 chr2 13134065 13134253 -240122330 - MER53 DNA DNA -3 186 2 336 303 38 54 chr2 13134271 13134456 -240122127 + MIR3 SINE MIR 15 196 -12 2229 105 0 7 chr2 13134621 13134927 -240121656 - AluSx SINE Alu -8 304 1 22 0 0 0 chr2 13135143 13135165 -240121418 + AT_rich Low_complexity Low_complexity 1 22 0 987 260 110 7 chr2 13136156 13136456 -240120127 + MER58B DNA MER1_type 11 341 0 260 342 140 0 chr2 13137183 13137297 -240119286 - MIR SINE MIR -118 144 15 2180 260 112 27 chr2 13138449 13140785 -240115798 - L1ME1 LINE L1 -64 6913 4323 300 262 43 43 chr2 13140870 13141034 -240115549 - L1ME1 LINE L1 -2744 4213 4050 343 293 137 51 chr2 13141134 13141390 -240115193 - L1ME1 LINE L1 -6563 296 19 327 366 58 25 chr2 13141786 13142062 -240114521 + MLT1J LTR MaLR 97 381 -130 686 297 20 60 chr2 13143201 13143450 -240113133 + MIR SINE MIR 3 241 -21 279 0 0 0 chr2 13143853 13143884 -240112699 + (CA)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr2 13144817 13144845 -240111738 + AT_rich Low_complexity Low_complexity 1 28 0 227 386 96 56 chr2 13145150 13145474 -240111109 + L2 LINE L2 2917 3253 -19 303 333 200 21 chr2 13145772 13146012 -240110571 + L3 LINE CR1 1246 1528 -49 4651 194 93 17 chr2 13146833 13148183 -240108400 - L1MC1 LINE L1 -14 6319 4865 187 150 33 0 chr2 13148191 13148251 -240108332 + (TA)n Simple_repeat Simple_repeat 1 62 0 258 122 0 0 chr2 13148254 13148295 -240108288 - Alu SINE Alu -12 290 250 41 48 0 0 chr2 13148295 13148357 -240108226 + AT_rich Low_complexity Low_complexity 1 62 0 585 234 7 13 chr2 13148378 13148532 -240108051 - L1MC1 LINE L1 -1304 4842 4690 201 359 0 26 chr2 13148812 13148929 -240107654 + CT-rich Low_complexity Low_complexity 3 116 0 636 335 72 3 chr2 13149000 13149307 -240107276 + LTR16A LTR ERVL 123 450 0 1962 326 57 23 chr2 13149402 13150406 -240106177 + HERV16 LTR ERVL 114 1151 -3845 819 295 36 13 chr2 13150453 13150758 -240105825 + L1MEc LINE L1 108 419 -5977 346 319 22 0 chr2 13150816 13150951 -240105632 + L1MEc LINE L1 1936 2073 -4323 423 293 140 22 chr2 13151542 13151764 -240104819 + MIR SINE MIR 5 252 -10 25 0 0 0 chr2 13152182 13152207 -240104376 + AT_rich Low_complexity Low_complexity 1 25 0 401 234 22 135 chr2 13152245 13152557 -240104026 + L1MC4 LINE L1 7763 8039 -3 711 288 29 4 chr2 13153240 13153518 -240103065 - L1MEc LINE L1 -5487 909 625 607 342 27 45 chr2 13153539 13153913 -240102670 - L1MEc LINE L1 -5992 404 38 604 309 141 49 chr2 13153920 13154367 -240102216 + L2 LINE L2 2108 2595 -719 380 343 131 21 chr2 13154369 13154915 -240101668 + L2 LINE L2 2707 3313 0 2273 81 7 3 chr2 13154991 13155287 -240101296 + AluSq SINE Alu 1 297 -16 258 32 0 0 chr2 13155293 13155324 -240101259 + (TA)n Simple_repeat Simple_repeat 2 32 0 36 0 0 0 chr2 13155506 13155542 -240101041 + AT_rich Low_complexity Low_complexity 1 36 0 2954 170 113 0 chr2 13155553 13156154 -240100429 + LTR51 LTR ERV1 3 671 0 2091 167 5 11 chr2 13156786 13157163 -240099420 + THE1C LTR MaLR 1 375 0 357 287 85 8 chr2 13157293 13157422 -240099161 + MIR SINE MIR 110 248 -14 315 0 0 0 chr2 13157432 13157467 -240099116 + (TG)n Simple_repeat Simple_repeat 2 36 0 341 277 34 8 chr2 13157846 13157965 -240098618 - L2 LINE L2 0 3313 3192 21 0 0 0 chr2 13158148 13158169 -240098414 + AT_rich Low_complexity Low_complexity 1 21 0 241 316 165 8 chr2 13159379 13159512 -240097071 - L2 LINE L2 0 3313 3160 2018 249 55 32 chr2 13159530 13160766 -240095817 - L1ME2 LINE L1 -169 5995 4735 212 57 0 29 chr2 13160838 13160873 -240095710 + (TTTTA)n Simple_repeat Simple_repeat 1 34 0 13492 26 2 1 chr2 13160873 13163221 -240093362 - L1PA3 LINE L1 -24 6131 3782 938 267 62 31 chr2 13163226 13163514 -240093069 - MLT1E LTR MaLR -296 297 1 25 0 0 0 chr2 13163788 13163813 -240092770 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr2 13163830 13163859 -240092724 + AT_rich Low_complexity Low_complexity 1 29 0 279 0 0 0 chr2 13164791 13164822 -240091761 + (CA)n Simple_repeat Simple_repeat 2 32 0 438 79 0 0 chr2 13165039 13165102 -240091481 + (TG)n Simple_repeat Simple_repeat 2 64 0 1606 204 28 6 chr2 13165111 13165468 -240091115 - MLT1A1 LTR MaLR 0 365 1 1776 167 10 10 chr2 13166796 13167108 -240089475 - AluJo SINE Alu 0 312 1 485 243 0 0 chr2 13167374 13167485 -240089098 - L1MA9 LINE L1 -24 6288 6178 222 327 89 23 chr2 13168122 13168336 -240088247 - L2 LINE L2 -385 2929 2702 672 231 0 0 chr2 13168758 13168892 -240087691 + AluJo SINE Alu 1 134 -178 404 317 96 46 chr2 13169100 13169403 -240087180 - HERV16 LTR ERVL -4064 932 615 2275 104 0 0 chr2 13169437 13169744 -240086839 - AluSx SINE Alu -5 307 1 623 305 98 50 chr2 13170274 13170671 -240085912 - LTR16A LTR ERVL -4 446 31 22 56 0 0 chr2 13170816 13170852 -240085731 + AT_rich Low_complexity Low_complexity 1 36 0 975 140 6 12 chr2 13171255 13171419 -240085164 + L1PA10 LINE L1 6006 6168 0 292 378 55 8 chr2 13171933 13172060 -240084523 - L2 LINE L2 -22 3250 3118 27 29 0 0 chr2 13172701 13172735 -240083848 + AT_rich Low_complexity Low_complexity 1 34 0 582 297 18 32 chr2 13172850 13173069 -240083514 + L2 LINE L2 2270 2485 -829 2610 186 38 39 chr2 13174534 13175169 -240081414 - LTR27 LTR ERV1 0 636 3 307 364 91 0 chr2 13175245 13175410 -240081173 + MIR SINE MIR 9 188 -74 180 283 21 103 chr2 13176185 13176330 -240080253 + L2 LINE L2 3171 3303 -10 32 57 0 0 chr2 13176654 13176707 -240079876 + AT_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr2 13176819 13176854 -240079729 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 13176876 13176992 -240079591 + (TA)n Simple_repeat Simple_repeat 1 118 0 23 0 0 0 chr2 13177248 13177271 -240079312 + AT_rich Low_complexity Low_complexity 1 23 0 314 45 23 0 chr2 13177356 13177400 -240079183 + (CA)n Simple_repeat Simple_repeat 2 46 0 589 294 24 48 chr2 13177558 13177888 -240078695 - MER90 LTR ERV1 0 575 254 750 166 13 0 chr2 13177888 13178102 -240078481 - L1P LINE L1 -743 5403 5203 180 0 0 0 chr2 13178102 13178122 -240078461 + (TC)n Simple_repeat Simple_repeat 1 20 0 1008 124 0 0 chr2 13178123 13178301 -240078282 + (TA)n Simple_repeat Simple_repeat 2 179 0 389 198 0 62 chr2 13178333 13178429 -240078154 - L1MC4 LINE L1 -1339 6703 6614 2589 221 7 5 chr2 13178458 13179055 -240077528 - L1P LINE L1 -970 5176 4579 4001 175 16 1 chr2 13179056 13179792 -240076791 + L1PA16 LINE L1 5411 6157 -9 180 152 0 0 chr2 13179838 13179871 -240076712 + (TG)n Simple_repeat Simple_repeat 2 34 0 1036 246 33 30 chr2 13179981 13180282 -240076301 - MER90 LTR ERV1 -311 303 2 252 235 62 37 chr2 13180597 13180678 -240075905 - MER21B LTR ERV1 -271 592 510 1152 132 3 11 chr2 13180785 13181740 -240074843 - HSATII Satellite Satellite 0 947 1 879 130 24 21 chr2 13181756 13182160 -240074423 - HSATII Satellite Satellite -63 404 1 24 0 0 0 chr2 13182390 13182414 -240074169 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr2 13182529 13182564 -240074019 + AT_rich Low_complexity Low_complexity 1 35 0 430 190 17 0 chr2 13182586 13182702 -240073881 + (TA)n Simple_repeat Simple_repeat 1 118 0 314 45 23 0 chr2 13183066 13183110 -240073473 + (CA)n Simple_repeat Simple_repeat 2 46 0 654 226 31 0 chr2 13184554 13184705 -240071878 + MLT1B LTR MaLR 3 158 -232 1181 159 50 43 chr2 13184705 13184963 -240071620 - THE1C LTR MaLR 0 375 116 1017 122 6 9 chr2 13185087 13186163 -240070420 - HSATII Satellite Satellite -40 1072 1 1000 102 14 21 chr2 13186194 13186612 -240069971 - HSATII Satellite Satellite 0 415 1 1002 128 14 15 chr2 13186638 13187882 -240068701 - HSATII Satellite Satellite 0 1243 1 473 303 48 5 chr2 13187997 13188185 -240068398 + MLT1C LTR MaLR 208 403 -64 221 167 21 0 chr2 13188203 13188251 -240068332 + MER5C DNA MER1_type 270 318 -6 368 291 119 8 chr2 13188726 13188860 -240067723 - MIR SINE MIR -99 163 15 372 125 0 0 chr2 13189690 13189754 -240066829 - HSATII Satellite Satellite -106 64 1 1172 118 8 10 chr2 13189779 13191729 -240064854 - HSATII Satellite Satellite -1 1946 1 1248 116 11 3 chr2 13191744 13192599 -240063984 - HSATII Satellite Satellite -99 861 1 958 121 16 18 chr2 13192630 13194010 -240062573 - HSATII Satellite Satellite -5 1376 1 1131 122 8 8 chr2 13194030 13196385 -240060198 - HSATII Satellite Satellite 0 2354 1 888 139 14 8 chr2 13196508 13197691 -240058892 - HSATII Satellite Satellite -22 1189 1 1001 122 4 12 chr2 13197818 13198908 -240057675 - HSATII Satellite Satellite -1 1080 1 975 108 18 25 chr2 13198943 13199650 -240056933 - HSATII Satellite Satellite -1 701 1 628 320 61 16 chr2 13200123 13200370 -240056213 + MIR SINE MIR 2 259 -3 458 319 94 19 chr2 13200874 13201341 -240055242 - L1MCa LINE L1 -5145 1281 780 346 365 7 34 chr2 13201663 13201811 -240054772 + MIR SINE MIR 29 172 -90 253 330 50 10 chr2 13202805 13202905 -240053678 - MIR SINE MIR -111 151 48 333 23 0 0 chr2 13203561 13203605 -240052978 - L1PA3 LINE L1 0 6155 6112 197 328 86 26 chr2 13203629 13203745 -240052838 + MIR SINE MIR 20 142 -66 853 271 18 5 chr2 13203798 13204019 -240052564 + MER58A DNA MER1_type 1 224 0 335 233 0 0 chr2 13204031 13204104 -240052479 - MIR SINE MIR -67 195 123 1828 153 19 0 chr2 13204204 13204512 -240052071 - THE1C-int LTR MaLR -1264 316 3 1739 188 32 24 chr2 13204514 13204886 -240051697 - THE1C LTR MaLR 0 375 1 5300 130 33 17 chr2 13204887 13205938 -240050645 + L1M1 LINE L1 2696 3763 -3802 262 207 0 37 chr2 13205938 13206020 -240050563 + (TA)n Simple_repeat Simple_repeat 1 79 0 180 395 37 12 chr2 13206337 13206418 -240050165 + L2 LINE L2 3168 3250 -22 22 0 0 0 chr2 13207016 13207038 -240049545 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr2 13207363 13207391 -240049192 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr2 13207958 13207979 -240048604 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 13208641 13208666 -240047917 + AT_rich Low_complexity Low_complexity 1 25 0 220 364 57 0 chr2 13208838 13208926 -240047657 + L2 LINE L2 3171 3263 -9 10418 186 25 10 chr2 13209179 13211125 -240045458 + L1M1 LINE L1 725 2698 -4867 1857 155 41 30 chr2 13211126 13211493 -240045090 - THE1C LTR MaLR -2 373 3 2594 113 0 13 chr2 13211495 13211875 -240044708 - THE1C-int LTR MaLR 0 1580 1206 356 306 57 8 chr2 13212354 13212478 -240044105 + L2 LINE L2 3141 3270 -2 279 0 0 0 chr2 13213318 13213349 -240043234 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 299 15 15 chr2 13213585 13213652 -240042931 - L2 LINE L2 -5 3308 3242 289 402 26 39 chr2 13214143 13214377 -240042206 - L2 LINE L2 -556 2758 2528 1080 224 55 22 chr2 13215168 13215440 -240041143 - MLT2D LTR ERVL -133 281 1 220 312 64 48 chr2 13216558 13216683 -240039900 - MIR SINE MIR -71 191 65 220 125 18 18 chr2 13216732 13216788 -240039795 + (TA)n Simple_repeat Simple_repeat 2 57 0 1297 212 0 60 chr2 13216803 13217105 -240039478 - AluJb SINE Alu -28 284 1 881 338 65 32 chr2 13217518 13218116 -240038467 - ERVL LTR ERVL -1050 4714 4097 227 58 87 51 chr2 13218246 13218384 -240038199 + (TA)n Simple_repeat Simple_repeat 1 143 0 422 52 31 94 chr2 13218398 13218590 -240037993 + (TA)n Simple_repeat Simple_repeat 1 180 0 254 284 0 0 chr2 13218598 13218686 -240037897 + L1MC4 LINE L1 6616 6703 -1339 235 283 0 22 chr2 13218660 13218752 -240037831 - L1MC4 LINE L1 -1339 6703 6614 * 198 209 0 0 chr2 13218752 13218795 -240037788 + (TA)n Simple_repeat Simple_repeat 2 44 0 227 337 0 0 chr2 13218796 13218885 -240037698 - L1MC4 LINE L1 -1339 6703 6615 219 139 0 0 chr2 13218888 13218924 -240037659 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 317 315 0 0 chr2 13218924 13219013 -240037570 + L1MC4 LINE L1 6615 6703 -1339 311 297 11 0 chr2 13218933 13219024 -240037559 - L1MC4 LINE L1 -1339 6703 6612 * 265 34 85 0 chr2 13219062 13219121 -240037462 + (ATATG)n Simple_repeat Simple_repeat 1 64 0 291 151 40 40 chr2 13219208 13219360 -240037223 + (TA)n Simple_repeat Simple_repeat 2 153 0 5586 223 38 31 chr2 13219365 13220167 -240036416 + L1 LINE L1 2341 3136 -3010 5502 68 3 9 chr2 13220167 13220901 -240035682 + L1PA8 LINE L1 5437 6172 0 5586 223 38 31 chr2 13220901 13222264 -240034319 + L1 LINE L1 3136 4437 -1709 357 135 0 124 chr2 13222726 13222815 -240033768 - MADE1 DNA Mariner 0 80 3 1845 146 0 64 chr2 13223328 13223657 -240032926 - AluSx SINE Alu -2 310 3 25 51 0 0 chr2 13223797 13223836 -240032747 + AT_rich Low_complexity Low_complexity 1 39 0 27 0 0 0 chr2 13223929 13223956 -240032627 + AT_rich Low_complexity Low_complexity 1 27 0 208 260 90 10 chr2 13224942 13225042 -240031541 + MIR3 SINE MIR 98 205 -3 1586 166 3 46 chr2 13225088 13225390 -240031193 + AluJo SINE Alu 7 295 -17 1665 172 33 44 chr2 13225661 13226027 -240030556 - THE1C LTR MaLR 0 375 14 815 243 80 24 chr2 13226153 13226528 -240030055 - MER114 LTR ERV -30 618 223 2410 129 18 36 chr2 13226670 13227113 -240029470 + L1MA2 LINE L1 5859 6293 -11 29 0 0 0 chr2 13227117 13227146 -240029437 + AT_rich Low_complexity Low_complexity 1 29 0 3843 247 59 21 chr2 13227159 13229201 -240027382 - L1MC/D LINE L1 -743 5403 3684 5056 156 50 4 chr2 13229203 13230118 -240026465 - L1MA7 LINE L1 -1 6290 5334 1299 176 88 6 chr2 13230112 13230430 -240026153 + L1MA3 LINE L1 4121 4464 -1682 * 644 184 37 18 chr2 13231246 13231409 -240025174 - L1MA8 LINE L1 -10 6281 6116 22 35 0 0 chr2 13232334 13232363 -240024220 + AT_rich Low_complexity Low_complexity 1 29 0 4085 207 15 15 chr2 13232942 13233744 -240022839 + L1PA16 LINE L1 12 813 -6752 * 5641 152 22 4 chr2 13233741 13235058 -240021525 + L1MA3 LINE L1 4788 6153 -152 5126 179 41 7 chr2 13235488 13237467 -240019116 + L1PA16 LINE L1 5544 7584 -1 254 310 26 0 chr2 13237538 13237651 -240018932 - L2 LINE L2 -630 2684 2569 497 276 41 14 chr2 13238142 13238287 -240018296 + L2 LINE L2 3165 3313 0 423 0 0 0 chr2 13239445 13239492 -240017091 + (TATAA)n Simple_repeat Simple_repeat 3 49 0 463 11 55 83 chr2 13239549 13239919 -240016664 + (TA)n Simple_repeat Simple_repeat 1 359 0 412 198 40 34 chr2 13239923 13240100 -240016483 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 2527 233 44 16 chr2 13241439 13242173 -240014410 - L1M4 LINE L1 -1212 5328 4575 1291 259 94 23 chr2 13242288 13243135 -240013448 - L1MDa LINE L1 -3235 3305 2394 353 265 82 55 chr2 13243450 13243861 -240012722 - L1M4 LINE L1 -1664 4482 4059 5603 162 22 9 chr2 13244070 13245305 -240011278 - L1MA7 LINE L1 0 6291 5039 1220 188 4 0 chr2 13245277 13245506 -240011077 - L1P LINE L1 -1465 4681 4452 * 2552 40 7 3 chr2 13247633 13247937 -240008646 - AluY SINE Alu -6 305 1 199 307 134 29 chr2 13248312 13248550 -240008033 - L3 LINE CR1 -177 1400 1138 238 274 137 42 chr2 13249041 13249209 -240007374 + MIR SINE MIR 53 236 -26 243 327 13 61 chr2 13249819 13249985 -240006598 + MIR SINE MIR 50 206 -56 279 79 0 0 chr2 13250249 13250287 -240006296 + (CA)n Simple_repeat Simple_repeat 2 39 0 894 305 4 0 chr2 13250292 13250525 -240006058 + L1ME1 LINE L1 108 341 -6055 618 189 30 0 chr2 13250553 13250685 -240005898 + L1MB2 LINE L1 5666 5801 -382 67 55 0 0 chr2 13250686 13250795 -240005788 + AT_rich Low_complexity Low_complexity 1 109 0 1387 153 38 103 chr2 13250798 13251224 -240005359 + L1MB2 LINE L1 5783 6180 -3 3291 256 66 51 chr2 13251382 13253612 -240002971 + L1ME1 LINE L1 3971 6230 -5 488 282 134 32 chr2 13254817 13255406 -240001177 + L1M4 LINE L1 3713 4361 -1785 236 278 43 49 chr2 13255419 13255581 -240001002 + L1M4 LINE L1 4688 4848 -1298 29 70 0 0 chr2 13255673 13255730 -240000853 + AT_rich Low_complexity Low_complexity 1 57 0 5882 94 15 70 chr2 13255792 13256774 -239999809 - L1PA13 LINE L1 -5 6158 5250 1695 195 0 3 chr2 13256774 13257087 -239999496 - AluSx SINE Alu 0 312 1 5882 94 15 70 chr2 13257087 13257656 -239998927 - L1PA13 LINE L1 -913 5250 4651 231 343 39 6 chr2 13257970 13258148 -239998435 + L1ME LINE L1 4745 4928 -1218 582 246 88 36 chr2 13258466 13258771 -239997812 + L1ME LINE L1 5301 5621 -549 363 283 40 52 chr2 13259288 13259461 -239997122 - HERV16 LTR ERVL -959 4805 4635 1717 197 18 91 chr2 13259494 13259802 -239996781 + MER31B LTR ERV1 5 265 -201 2056 120 55 0 chr2 13259802 13260094 -239996489 - AluSg SINE Alu -2 308 1 1717 197 18 91 chr2 13260094 13260282 -239996301 + MER31B LTR ERV1 265 465 -1 276 105 0 0 chr2 13261082 13261120 -239995463 - L1MC3 LINE L1 -1305 6480 6443 24 0 0 0 chr2 13261197 13261221 -239995362 + AT_rich Low_complexity Low_complexity 1 24 0 258 286 178 16 chr2 13261570 13261755 -239994828 + HAL1b LINE L1 339 553 -795 295 307 80 27 chr2 13262447 13262597 -239993986 + MIR SINE MIR 68 225 -37 1496 323 55 25 chr2 13262775 13263316 -239993267 - HERV16 LTR ERVL -2023 2973 2450 264 59 0 0 chr2 13263316 13263350 -239993233 + (TG)n Simple_repeat Simple_repeat 1 34 0 1496 323 55 25 chr2 13263350 13264647 -239991936 - HERV16 LTR ERVL -2546 2450 962 1892 300 81 28 chr2 13264725 13265526 -239991057 - HERV16 LTR ERVL -4150 846 3 860 249 56 56 chr2 13265588 13265962 -239990621 - MLT1A2 LTR MaLR 0 374 1 281 288 0 0 chr2 13266038 13266104 -239990479 - LTR16A LTR ERVL -321 129 64 731 312 38 16 chr2 13266134 13266448 -239990135 + LTR16A LTR ERVL 120 440 -10 31 44 0 0 chr2 13266472 13266517 -239990066 + AT_rich Low_complexity Low_complexity 1 45 0 369 140 11 65 chr2 13266540 13266633 -239989950 + L1MA5 LINE L1 6213 6300 0 21 36 0 0 chr2 13267104 13267132 -239989451 + AT_rich Low_complexity Low_complexity 1 28 0 543 304 71 29 chr2 13267430 13267670 -239988913 + MIR SINE MIR 2 251 -11 199 398 34 0 chr2 13267891 13267979 -239988604 - MIR SINE MIR -112 150 60 180 0 0 0 chr2 13268783 13268803 -239987780 + (TTG)n Simple_repeat Simple_repeat 2 21 0 325 261 80 0 chr2 13269891 13269979 -239986604 - L1MC4 LINE L1 -1334 6708 6614 228 71 0 0 chr2 13270007 13270049 -239986534 + LTR66 LTR ERVL 398 439 -171 23341 177 22 22 chr2 13270792 13271509 -239985074 + L1PA10 LINE L1 1 716 -5767 192 40 0 0 chr2 13271509 13271534 -239985049 + (CACAG)n Simple_repeat Simple_repeat 1 25 0 23341 177 22 22 chr2 13271534 13277260 -239979323 + L1PA10 LINE L1 716 6471 -12 233 241 18 62 chr2 13277284 13277396 -239979187 - MER53 DNA DNA -12 177 71 3758 133 45 74 chr2 13277425 13278751 -239977832 + pTR5 LTR ERV1 168 2295 -143 250 307 9 163 chr2 13279370 13279585 -239976998 - MER91A DNA MER1_type -1 195 14 228 86 0 0 chr2 13279740 13279775 -239976808 + (CA)n Simple_repeat Simple_repeat 2 36 0 2214 114 0 0 chr2 13279814 13280113 -239976470 - AluSx SINE Alu -11 301 3 951 378 17 19 chr2 13282057 13282644 -239973939 + L1PA16 LINE L1 788 1373 -6201 308 347 0 0 chr2 13282785 13282883 -239973700 + L1PA16 LINE L1 2085 2182 -5399 12018 223 61 13 chr2 13283189 13287398 -239969185 + L1PA16 LINE L1 2258 6769 -835 1468 181 51 40 chr2 13287398 13287769 -239968814 - THE1C LTR MaLR 0 375 1 12018 223 61 13 chr2 13287769 13288647 -239967936 + L1PA16 LINE L1 6769 7604 0 569 276 131 22 chr2 13289104 13289567 -239967016 - MLT1E1 LTR MaLR -1 653 5 270 295 74 66 chr2 13290155 13290296 -239966287 + HAL1 LINE L1 750 888 -1619 324 0 0 0 chr2 13290296 13290332 -239966251 + (TAA)n Simple_repeat Simple_repeat 2 37 0 270 295 74 66 chr2 13290332 13290556 -239966027 + HAL1 LINE L1 888 1118 -1389 468 251 151 59 chr2 13290616 13290974 -239965609 + HAL1b LINE L1 417 807 -541 2006 98 42 3 chr2 13291486 13291772 -239964811 - AluSx SINE Alu -13 299 3 678 171 17 0 chr2 13292899 13293016 -239963567 + FRAM SINE Alu 43 161 -15 4162 168 58 10 chr2 13294015 13294883 -239961700 + L1MC1 LINE L1 5425 6333 0 322 304 39 10 chr2 13295991 13296093 -239960490 + MIR SINE MIR 25 129 -79 359 326 21 14 chr2 13296344 13296485 -239960098 - MLT-int LTR MaLR -1212 523 382 376 195 33 60 chr2 13296687 13296822 -239959761 - MLT1H1 LTR MaLR -24 531 423 274 296 42 78 chr2 13297009 13297206 -239959377 - MLT1H1 LTR MaLR -361 194 1 1030 147 0 43 chr2 13297353 13297537 -239959046 - Tigger2a DNA MER2_type -258 176 1 385 298 62 57 chr2 13297559 13299251 -239957332 + L1ME3A LINE L1 3780 5544 -620 3995 195 53 20 chr2 13299252 13300491 -239956092 + L1MB4 LINE L1 4903 6180 0 315 264 124 0 chr2 13300526 13300647 -239955936 + L1ME3A LINE L1 5561 5696 -474 455 276 103 5 chr2 13300666 13300880 -239955703 + L1ME3A LINE L1 5755 5989 -181 1722 179 30 0 chr2 13301569 13301865 -239954718 + AluJb SINE Alu 3 307 -5 2731 253 24 93 chr2 13301865 13303003 -239953580 - L1P LINE L1 -4028 2118 1060 * 3715 164 94 15 chr2 13302997 13303723 -239952860 + L1PA8 LINE L1 5390 6172 0 22 0 0 0 chr2 13303822 13303844 -239952739 + AT_rich Low_complexity Low_complexity 1 22 0 2015 131 0 10 chr2 13304011 13304302 -239952281 - AluSx SINE Alu -24 288 1 188 340 61 7 chr2 13305542 13305689 -239950894 + MIR SINE MIR 51 205 -57 30 83 0 0 chr2 13306442 13306514 -239950069 + AT_rich Low_complexity Low_complexity 1 72 0 1848 189 87 13 chr2 13356695 13357155 -239899428 + LTR54B LTR ERV1 1 494 -4 275 298 0 10 chr2 13357530 13357634 -239898949 + MER57-int LTR ERV1 389 491 -7046 436 86 0 12 chr2 13357713 13357790 -239898793 + L1PA3 LINE L1 5938 6009 -145 300 228 0 0 chr2 13358042 13358156 -239898427 + C-rich Low_complexity Low_complexity 1 114 0 268 289 9 18 chr2 13358332 13358446 -239898137 + MLT1H LTR MaLR 433 545 -4 340 308 30 8 chr2 13358449 13358582 -239898001 + MER69 DNA AcHobo 299 434 -792 1404 105 0 16 chr2 13358600 13358732 -239897851 + AluSg SINE Alu 3 133 -177 1828 140 19 51 chr2 13358732 13359046 -239897537 + AluSx SINE Alu 1 304 -8 1404 105 0 16 chr2 13359046 13359104 -239897479 + AluSg SINE Alu 133 190 -120 234 0 0 0 chr2 13359157 13359183 -239897400 + (GA)n Simple_repeat Simple_repeat 1 26 0 1735 267 86 41 chr2 13359193 13360137 -239896446 + L1MEc LINE L1 394 1379 -5017 250 292 67 19 chr2 13360350 13360559 -239896024 + L1MEc LINE L1 829 1047 -5349 2417 127 13 8 chr2 13360697 13361083 -239895500 - Harlequin LTR ERV1 -6508 388 1 1571 168 88 131 chr2 13361083 13361595 -239894988 - LTR2B LTR ERV1 0 490 1 413 222 76 41 chr2 13361805 13361976 -239894607 + L1M4 LINE L1 4744 4920 -1226 975 233 28 0 chr2 13362033 13362316 -239894267 + L1M4 LINE L1 5009 5299 -847 290 350 20 20 chr2 13362368 13362614 -239893969 + L1ME1 LINE L1 5898 6143 -23 25 65 0 0 chr2 13362615 13362661 -239893922 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr2 13362674 13362695 -239893888 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 13362884 13362909 -239893674 + AT_rich Low_complexity Low_complexity 1 25 0 1514 257 92 54 chr2 13363247 13363411 -239893172 + L1ME1 LINE L1 4936 5092 -1074 273 75 0 0 chr2 13363411 13363451 -239893132 + (CA)n Simple_repeat Simple_repeat 1 40 0 1514 257 92 54 chr2 13363451 13363778 -239892805 + L1ME1 LINE L1 5092 5405 -761 1098 222 125 44 chr2 13363778 13364210 -239892373 - MLT1C LTR MaLR 0 467 1 1514 257 92 54 chr2 13364210 13364776 -239891807 + L1ME1 LINE L1 5405 6024 -142 1899 145 26 40 chr2 13365816 13366196 -239890387 + THE1C LTR MaLR 1 375 0 256 318 11 11 chr2 13367824 13367912 -239888671 + MIR SINE MIR 61 148 -114 252 316 105 0 chr2 13368096 13368191 -239888392 + MIR SINE MIR 126 230 -32 205 265 59 15 chr2 13368874 13368942 -239887641 + MER5B DNA MER1_type 5 75 -103 1572 106 0 55 chr2 13370128 13370364 -239886219 + AluSq SINE Alu 78 300 -13 1763 179 69 45 chr2 13370579 13370997 -239885586 - MSTC LTR MaLR 0 428 1 22 0 0 0 chr2 13371544 13371566 -239885017 + AT_rich Low_complexity Low_complexity 1 22 0 319 237 0 0 chr2 13371597 13371656 -239884927 + MER20 DNA MER1_type 1 59 -160 642 226 45 0 chr2 13371698 13371853 -239884730 + MER20 DNA MER1_type 55 216 -3 293 261 70 63 chr2 13371869 13372011 -239884572 - MIR SINE MIR -59 203 61 289 93 37 0 chr2 13372111 13372165 -239884418 + (TA)n Simple_repeat Simple_repeat 1 56 0 557 268 11 19 chr2 13372178 13372332 -239884251 - MLT2B1 LTR ERVL -96 424 228 1765 154 53 56 chr2 13372340 13372531 -239884052 - THE1C LTR MaLR 0 375 184 1665 151 102 37 chr2 13372531 13372883 -239883700 + THE1C LTR MaLR 1 375 0 1765 154 53 56 chr2 13372883 13373067 -239883516 - THE1C LTR MaLR -191 184 1 228 226 57 0 chr2 13373067 13373117 -239883466 - MLT2B1 LTR ERVL -288 232 180 484 176 88 0 chr2 13373402 13373504 -239883079 - MER20 DNA MER1_type -32 187 77 394 281 21 0 chr2 13373505 13373601 -239882982 - HERV16 LTR ERVL -4845 151 54 213 159 23 0 chr2 13374138 13374182 -239882401 + (TA)n Simple_repeat Simple_repeat 2 46 0 21 36 0 0 chr2 13375688 13375716 -239880867 + AT_rich Low_complexity Low_complexity 1 28 0 186 43 0 0 chr2 13375821 13375844 -239880739 + (TA)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 13375927 13375948 -239880635 + AT_rich Low_complexity Low_complexity 1 21 0 201 329 43 0 chr2 13376316 13376386 -239880197 + L2 LINE L2 3198 3270 -2 42 20 0 0 chr2 13376917 13376966 -239879617 + AT_rich Low_complexity Low_complexity 1 49 0 1678 210 71 14 chr2 13377680 13378104 -239878479 - L1MB4 LINE L1 -2 6178 5731 1111 78 1 106 chr2 13378108 13378307 -239878276 - L1PA11 LINE L1 -2 6172 5992 461 371 30 5 chr2 13378311 13378513 -239878070 + L2 LINE L2 1820 2026 -1288 653 186 8 8 chr2 13379861 13379985 -239876598 - L1MD2 LINE L1 -24 6335 6212 242 299 0 11 chr2 13380482 13380569 -239876014 - L1MEd LINE L1 -4871 1248 1163 1513 166 11 70 chr2 13380772 13381127 -239875456 - L1MA9 LINE L1 0 6312 5979 425 312 59 11 chr2 13381279 13381465 -239875118 + L2 LINE L2 3119 3313 0 407 129 100 0 chr2 13382993 13383063 -239873520 - MADE1 DNA Mariner -2 78 2 189 107 0 0 chr2 13383141 13383169 -239873414 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2167 95 0 0 chr2 13383201 13383505 -239873078 + L1PA13 LINE L1 5857 6160 -3 395 386 12 12 chr2 13383610 13383856 -239872727 + MIR SINE MIR 6 251 -11 203 295 0 16 chr2 13384927 13384988 -239871595 + (CATA)n Simple_repeat Simple_repeat 3 62 0 551 268 95 25 chr2 13385508 13385751 -239870832 - L1ME1 LINE L1 -4 6162 5903 764 165 30 0 chr2 13385757 13385890 -239870693 + MER2 DNA MER2_type 6 142 -203 411 234 24 69 chr2 13385890 13386034 -239870549 - L1ME1 LINE L1 -552 5614 5476 228 197 40 26 chr2 13386288 13386364 -239870219 - L1ME2 LINE L1 -1 6163 6087 780 301 53 40 chr2 13386368 13386508 -239870075 - L1MEc LINE L1 -3279 2936 2799 1987 152 0 3 chr2 13386508 13386810 -239869773 - AluJb SINE Alu -8 304 4 780 301 53 40 chr2 13386810 13387276 -239869307 - L1MEc LINE L1 -3416 2799 2322 354 121 30 0 chr2 13387317 13387383 -239869200 + LTR60 LTR ERV1 1 68 -518 928 224 44 59 chr2 13387625 13387656 -239868927 + LTR43 LTR ERV1 190 220 -382 2156 104 7 7 chr2 13387656 13387965 -239868618 + AluSc SINE Alu 1 309 0 928 224 44 59 chr2 13387965 13388205 -239868378 + LTR43 LTR ERV1 220 457 -145 947 272 80 49 chr2 13388422 13388918 -239867665 - L1MEc LINE L1 -4092 2304 1825 2109 112 0 0 chr2 13388918 13389205 -239867378 + AluSx SINE Alu 1 287 -25 207 88 0 0 chr2 13389208 13389242 -239867341 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 947 272 80 49 chr2 13389242 13389698 -239866885 - L1MEc LINE L1 -4572 1824 1265 597 239 70 37 chr2 13390039 13390282 -239866301 + MER57-int LTR ERV1 1710 1960 -2976 * 2612 233 71 17 chr2 13390279 13391208 -239865375 + MER57-int LTR ERV1 3294 4529 -407 3422 257 14 16 chr2 13391217 13392050 -239864533 + MER57-int LTR ERV1 6312 7143 -394 1340 224 100 20 chr2 13392051 13392511 -239864072 + LTR54B LTR ERV1 1 497 -1 1499 143 109 34 chr2 13393406 13393755 -239862828 - THE1C LTR MaLR 0 375 1 409 274 130 43 chr2 13394856 13395086 -239861497 - MIR SINE MIR -1 261 12 183 368 26 13 chr2 13395213 13395289 -239861294 - MIR3 SINE MIR -117 91 15 192 40 0 0 chr2 13395324 13395349 -239861234 + (CA)n Simple_repeat Simple_repeat 2 26 0 25 31 0 0 chr2 13395616 13395648 -239860935 + AT_rich Low_complexity Low_complexity 1 32 0 201 211 0 0 chr2 13395670 13395722 -239860861 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 447 19 0 0 chr2 13395739 13395791 -239860792 + (CA)n Simple_repeat Simple_repeat 1 52 0 200 350 126 42 chr2 13395877 13396020 -239860563 + MIR SINE MIR 20 174 -88 330 204 20 0 chr2 13396067 13396165 -239860418 + (TA)n Simple_repeat Simple_repeat 2 101 0 357 169 48 6 chr2 13396222 13396388 -239860195 + (TA)n Simple_repeat Simple_repeat 2 174 0 1914 134 24 0 chr2 13396674 13396964 -239859619 + AluSx SINE Alu 1 297 -15 333 118 0 0 chr2 13397249 13397300 -239859283 + (CA)n Simple_repeat Simple_repeat 2 52 0 1645 85 4 0 chr2 13397408 13397643 -239858940 - L1MA2 LINE L1 0 6304 6069 561 88 0 0 chr2 13397644 13397724 -239858859 - L1MA1 LINE L1 -81 6221 6142 8926 104 16 9 chr2 13397856 13399127 -239857456 + HSMAR1 DNA Mariner 4 1284 -3 225 0 0 0 chr2 13399127 13399152 -239857431 + (TA)n Simple_repeat Simple_repeat 2 26 0 210 235 29 59 chr2 13399574 13399642 -239856941 + MIR SINE MIR 186 251 -11 193 269 15 30 chr2 13399870 13399937 -239856646 + L2 LINE L2 3203 3268 -4 233 356 30 20 chr2 13400001 13400102 -239856481 + MIR3 SINE MIR 91 192 -16 389 295 126 63 chr2 13400554 13400967 -239855616 - MLT1H LTR MaLR -4 545 107 291 332 15 49 chr2 13401040 13401305 -239855278 - HAL1 LINE L1 -504 2003 1748 271 279 43 101 chr2 13401643 13401851 -239854732 + LTR67 LTR ERVL 362 557 0 1118 186 59 116 chr2 13401955 13402233 -239854350 - MLT1A1 LTR MaLR 0 365 114 2045 129 50 19 chr2 13402233 13402597 -239853986 + THE1C LTR MaLR 1 375 0 1118 186 59 116 chr2 13402597 13402705 -239853878 - MLT1A1 LTR MaLR -251 114 1 851 292 133 49 chr2 13402732 13403760 -239852823 - HAL1 LINE L1 -883 1624 510 304 341 39 55 chr2 13403883 13404065 -239852518 - HAL1 LINE L1 -2324 183 5 1523 258 72 44 chr2 13404922 13405488 -239851095 - MER119 DNA MER1_type -1 582 1 221 382 22 29 chr2 13405576 13405712 -239850871 - MIR3 SINE MIR -3 205 71 22 35 0 0 chr2 13406221 13406250 -239850333 + AT_rich Low_complexity Low_complexity 1 29 0 250 275 123 43 chr2 13407226 13407364 -239849219 - Charlie8 DNA MER1_type -2153 264 116 201 74 0 0 chr2 13407475 13407502 -239849081 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1030 223 33 110 chr2 13408577 13409081 -239847502 + LTR8A LTR ERV1 55 586 -105 306 73 0 0 chr2 13409082 13409091 -239847492 + (TG)n Simple_repeat Simple_repeat 1 50 0 306 73 0 0 chr2 13409091 13409132 -239847451 + (TG)n Simple_repeat Simple_repeat 2 42 0 192 40 0 0 chr2 13410297 13410322 -239846261 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3765 35 2 2 chr2 13411811 13412267 -239844316 - L1PA3 LINE L1 -3 6152 5697 214 239 0 0 chr2 13413537 13413583 -239843000 + MIR SINE MIR 95 140 -122 262 376 18 0 chr2 13413709 13413818 -239842765 - MIR3 SINE MIR -15 193 83 1917 140 88 37 chr2 13415251 13415658 -239840925 - LTR23 LTR ERV1 -9 428 1 497 226 26 9 chr2 13415758 13415873 -239840710 - LTR23-int LTR ERV1 -223 4900 4784 6554 155 83 10 chr2 13415883 13417146 -239839437 - LTR49-int LTR ERV1 -657 5674 4320 215 61 30 0 chr2 13417171 13417204 -239839379 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1486 168 35 80 chr2 13417204 13417578 -239839005 - LTR49-int LTR ERV1 -4417 1914 1558 1546 200 43 130 chr2 13417703 13418373 -239838210 - LTR9 LTR ERV1 0 612 1 2078 164 50 9 chr2 13419183 13419603 -239836980 - LTR23 LTR ERV1 0 437 1 22 35 0 0 chr2 13419874 13419903 -239836680 + AT_rich Low_complexity Low_complexity 1 29 0 1324 184 92 48 chr2 13419959 13420317 -239836266 - MLT1A2 LTR MaLR 0 374 1 198 396 36 27 chr2 13420571 13420682 -239835901 - MIR SINE MIR -63 145 34 396 0 0 0 chr2 13421277 13421321 -239835262 + (CA)n Simple_repeat Simple_repeat 1 44 0 592 241 45 11 chr2 13421494 13421665 -239834918 + MLT1H LTR MaLR 1 153 -396 1829 206 84 24 chr2 13421735 13422197 -239834386 - LTR2B LTR ERV1 0 490 1 41047 66 14 21 chr2 13422197 13427707 -239828876 - Harlequin LTR ERV1 0 6896 1426 186 43 0 0 chr2 13427707 13427730 -239828853 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 41047 66 14 21 chr2 13427730 13427757 -239828826 - Harlequin LTR ERV1 -5470 1426 1400 6054 255 60 38 chr2 13427873 13429964 -239826619 - L1MD2 LINE L1 -159 6460 4264 2076 177 67 0 chr2 13429964 13430365 -239826218 - MSTA LTR MaLR 0 428 1 6054 255 60 38 chr2 13430365 13432005 -239824578 - L1MD2 LINE L1 -2355 4264 2661 428 173 0 0 chr2 13432350 13432425 -239824158 + MSTD LTR MaLR 322 396 0 1149 273 14 39 chr2 13432425 13432909 -239823674 - L1MD2 LINE L1 -5861 548 20 283 340 116 7 chr2 13435502 13435649 -239820934 + MIR SINE MIR 68 230 -32 21 0 0 0 chr2 13436021 13436042 -239820541 + AT_rich Low_complexity Low_complexity 1 21 0 1761 186 3 0 chr2 13436458 13436749 -239819834 - AluJo SINE Alu -11 301 10 3581 263 20 25 chr2 13437292 13438146 -239818437 + L1MC3 LINE L1 2 848 -5359 1965 111 0 88 chr2 13438146 13438487 -239818096 + AluSx SINE Alu 1 311 -1 3581 263 20 25 chr2 13438487 13438994 -239817589 + L1MC3 LINE L1 848 1356 -4851 1812 232 112 48 chr2 13438995 13440228 -239816355 + L1MC3 LINE L1 1605 2825 -3739 4239 239 66 53 chr2 13440364 13441653 -239814930 + L1MC3 LINE L1 2792 4063 -2501 273 57 0 0 chr2 13441653 13441688 -239814895 + (TG)n Simple_repeat Simple_repeat 2 36 0 4239 239 66 53 chr2 13441688 13444390 -239812193 + L1MC3 LINE L1 4063 5790 -774 1108 215 19 8 chr2 13444547 13444812 -239811771 + L1MC3 LINE L1 7928 8195 -8 21 0 0 0 chr2 13446479 13446500 -239810083 + AT_rich Low_complexity Low_complexity 1 21 0 487 274 52 24 chr2 13448773 13448985 -239807598 - HAL1 LINE L1 0 2507 2290 378 366 32 32 chr2 13449105 13449356 -239807227 - MIR SINE MIR 0 262 12 1546 144 4 0 chr2 13449362 13449598 -239806985 + AluSq SINE Alu 1 237 -76 431 279 0 33 chr2 13450769 13450891 -239805692 - LTR49-int LTR ERV1 -3773 2558 2441 243 0 0 0 chr2 13451036 13451063 -239805520 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 7537 28 0 0 chr2 13451063 13452351 -239804232 - L1PA3 LINE L1 -13 6142 4854 1085 243 6 61 chr2 13453653 13453982 -239802601 - LTR40b LTR ERVL 0 462 152 381 345 39 57 chr2 13454092 13454321 -239802262 - L1MEd LINE L1 -5640 479 255 23 0 0 0 chr2 13454409 13454432 -239802151 + AT_rich Low_complexity Low_complexity 1 23 0 1968 203 31 14 chr2 13454546 13454965 -239801618 - MSTB LTR MaLR 0 426 1 189 404 72 18 chr2 13454992 13455158 -239801425 + L2 LINE L2 2872 3046 -226 213 253 25 0 chr2 13455261 13455340 -239801243 + (TAA)n Simple_repeat Simple_repeat 3 83 0 201 381 79 5 chr2 13455366 13455555 -239801028 - MIR SINE MIR -37 225 23 24 0 0 0 chr2 13455578 13455602 -239800981 + AT_rich Low_complexity Low_complexity 1 24 0 212 250 33 0 chr2 13456157 13456217 -239800366 + A-rich Low_complexity Low_complexity 4 65 0 225 305 84 15 chr2 13458473 13458604 -239797979 - MIR SINE MIR 0 262 123 5507 219 36 62 chr2 13460075 13462388 -239794195 + L1MC2 LINE L1 3510 5729 -615 2028 134 3 0 chr2 13462388 13462687 -239793896 + AluSx SINE Alu 1 300 -12 5507 219 36 62 chr2 13462687 13463278 -239793305 + L1MC2 LINE L1 5729 6334 -10 333 0 0 0 chr2 13463278 13463315 -239793268 + (A)n Simple_repeat Simple_repeat 1 37 0 4780 173 39 19 chr2 13465913 13466813 -239789770 + L1MA8 LINE L1 5304 6184 -107 13472 152 22 13 chr2 13466813 13467325 -239789258 - Tigger1 DNA MER2_type 0 2418 1912 1635 196 3 0 chr2 13467325 13467621 -239788962 - AluJo SINE Alu -15 297 1 13472 152 22 13 chr2 13467621 13468661 -239787922 - Tigger1 DNA MER2_type -506 1912 882 198 0 0 0 chr2 13468661 13468683 -239787900 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2199 89 3 3 chr2 13468685 13468976 -239787607 - AluSp SINE Alu -22 291 1 13472 152 22 13 chr2 13468976 13469817 -239786766 - Tigger1 DNA MER2_type -1536 882 1 4780 173 39 19 chr2 13469817 13469883 -239786700 + L1MA8 LINE L1 6184 6290 -1 276 235 88 10 chr2 13469935 13470037 -239786546 + L1MA9 LINE L1 6116 6225 -87 208 317 10 20 chr2 13470273 13470374 -239786209 - MIR3 SINE MIR -104 104 5 252 272 28 84 chr2 13471660 13471800 -239784783 - MIR SINE MIR -65 143 18 933 268 65 74 chr2 13471939 13472398 -239784185 - MER77 LTR ERV1 -6 599 145 388 271 18 47 chr2 13472383 13472553 -239784030 - MER77 LTR ERV1 -360 245 81 * 2051 186 59 12 chr2 13472596 13473005 -239783578 - MSTA LTR MaLR 0 428 1 518 287 64 5 chr2 13474214 13474416 -239782167 + LTR50 LTR ERVL 11 224 -571 405 305 136 53 chr2 13474413 13474715 -239781868 + LTR50 LTR ERVL 356 682 -113 * 1966 269 23 44 chr2 13475392 13476001 -239780582 + L1M3e LINE L1 466 1061 -6428 3339 237 73 35 chr2 13476046 13477282 -239779301 + L1M3e LINE L1 2008 3196 -4369 1961 136 0 3 chr2 13477282 13477576 -239779007 + AluSc SINE Alu 1 293 -16 3339 237 73 35 chr2 13477576 13478639 -239777944 + L1M3e LINE L1 3196 4405 -3160 539 234 58 47 chr2 13478646 13478920 -239777663 - MER114 LTR ERV -133 515 239 249 298 0 32 chr2 13478980 13479074 -239777509 - MER114 LTR ERV -505 143 53 22 35 0 0 chr2 13479160 13479189 -239777394 + AT_rich Low_complexity Low_complexity 1 29 0 2123 122 0 3 chr2 13479293 13479596 -239776987 - AluSq SINE Alu -11 302 1 416 336 65 70 chr2 13480163 13480579 -239776004 + L1M3e LINE L1 1596 2009 -5477 539 229 0 0 chr2 13480742 13480851 -239775732 - AluJb SINE Alu -203 109 1 521 226 92 0 chr2 13480851 13481015 -239775568 + L1M3e LINE L1 4286 4464 -3101 * 3117 11 0 0 chr2 13481011 13481370 -239775213 - L1PA2 LINE L1 -543 5612 5254 4828 18 0 2 chr2 13481377 13481940 -239774643 + L1PA2 LINE L1 5591 6152 -3 1252 284 26 11 chr2 13481952 13482495 -239774088 + L1M3e LINE L1 4447 4997 -2568 3192 175 42 36 chr2 13482501 13483199 -239773384 + L1MB2 LINE L1 5442 6143 -28 216 67 0 0 chr2 13484820 13484850 -239771733 + (TG)n Simple_repeat Simple_repeat 1 30 0 290 327 48 54 chr2 13484962 13485130 -239771453 - MIR SINE MIR -11 251 85 306 0 0 0 chr2 13485483 13485517 -239771066 + (TG)n Simple_repeat Simple_repeat 2 35 0 847 394 15 0 chr2 13485654 13486055 -239770528 + L2 LINE L2 2438 2844 -470 340 292 44 74 chr2 13486194 13486569 -239770014 + MLT1H1 LTR MaLR 75 506 -49 29 0 0 0 chr2 13486792 13486821 -239769762 + AT_rich Low_complexity Low_complexity 1 29 0 237 365 36 36 chr2 13487743 13487910 -239768673 - MIR SINE MIR -11 251 85 826 263 55 41 chr2 13488093 13488386 -239768197 + L2 LINE L2 2009 2305 -1009 488 326 127 25 chr2 13488402 13488638 -239767945 - LTR16B LTR ERVL -196 268 9 821 297 120 24 chr2 13488646 13489020 -239767563 + L2 LINE L2 2567 2976 -338 205 298 71 77 chr2 13489204 13489372 -239767211 + MIR SINE MIR 25 191 -71 358 114 29 14 chr2 13489726 13489796 -239766787 + CT-rich Low_complexity Low_complexity 3 73 0 1299 152 65 115 chr2 13489806 13490128 -239766455 - AluJb SINE Alu -3 309 4 424 300 92 21 chr2 13491554 13491794 -239764789 + L1MEd LINE L1 27 283 -5836 21 71 0 0 chr2 13491957 13491999 -239764584 + AT_rich Low_complexity Low_complexity 1 42 0 329 289 72 58 chr2 13492573 13492781 -239763802 + MIR SINE MIR 8 218 -44 272 300 75 47 chr2 13493065 13493258 -239763325 - MIR SINE MIR -41 221 19 349 41 20 0 chr2 13493513 13493562 -239763021 - MADE1 DNA Mariner 0 80 31 367 80 0 0 chr2 13493604 13493654 -239762929 + MADE1 DNA Mariner 31 80 0 370 298 41 0 chr2 13493686 13493807 -239762776 - L1MC4 LINE L1 -442 7600 7475 332 115 0 82 chr2 13494073 13494134 -239762449 - MLT2D LTR ERVL 0 414 369 378 224 22 34 chr2 13494141 13494320 -239762263 + (TA)n Simple_repeat Simple_repeat 2 178 0 7456 31 16 0 chr2 13494372 13495365 -239761218 - L1PA4 LINE L1 -3 6152 5156 1832 126 25 7 chr2 13495377 13495662 -239760921 + AluSx SINE Alu 6 295 -17 1015 247 45 17 chr2 13495783 13496075 -239760508 - MLT2D LTR ERVL -114 300 1 1286 24 24 18 chr2 13496417 13496583 -239760000 + L1PA4 LINE L1 5987 6153 -2 1132 234 86 24 chr2 13496818 13497156 -239759427 + MLT2D LTR ERVL 1 359 -55 775 98 40 6 chr2 13497176 13497349 -239759234 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 245 103 0 26 chr2 13497383 13497422 -239759161 + MLT2D LTR ERVL 360 397 0 1042 313 113 44 chr2 13499749 13500494 -239756089 + L2 LINE L2 10 805 -2509 21 36 0 0 chr2 13501039 13501067 -239755516 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 13501305 13501327 -239755256 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr2 13501522 13501555 -239755028 + AT_rich Low_complexity Low_complexity 1 33 0 24 67 0 0 chr2 13502466 13502511 -239754072 + AT_rich Low_complexity Low_complexity 1 45 0 537 238 7 33 chr2 13502511 13502662 -239753921 - L1MC3 LINE L1 -56 7729 7583 302 132 38 19 chr2 13502657 13502710 -239753873 - L1MC3 LINE L1 -585 7200 7147 * 437 299 16 16 chr2 13502709 13502893 -239753690 + L1M4 LINE L1 2499 2682 -3464 535 228 4 97 chr2 13503022 13503259 -239753324 - L1MCb LINE L1 -3261 3303 3089 420 288 0 14 chr2 13503305 13503444 -239753139 - L1MCb LINE L1 -3629 2935 2799 4634 243 21 45 chr2 13503511 13503634 -239752949 - L1PA13 LINE L1 -2709 4088 3964 1939 156 0 0 chr2 13503634 13503942 -239752641 - AluSg SINE Alu -2 308 1 4634 243 21 45 chr2 13503942 13506370 -239750213 - L1PA13 LINE L1 -2833 3964 1371 774 298 0 14 chr2 13506863 13507078 -239749505 - L1PA13 LINE L1 -6575 212 1 2918 259 60 27 chr2 13507082 13508563 -239748020 - L1MCb LINE L1 -4259 2306 363 2409 117 5 19 chr2 13508563 13508932 -239747651 - THE1B LTR MaLR 0 364 1 2918 259 60 27 chr2 13508932 13509307 -239747276 - L1MCb LINE L1 -6202 363 2 24 0 0 0 chr2 13509392 13509416 -239747167 + AT_rich Low_complexity Low_complexity 1 24 0 360 0 0 0 chr2 13509676 13509716 -239746867 + (CA)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr2 13510058 13510091 -239746492 + (TG)n Simple_repeat Simple_repeat 2 34 0 598 268 46 26 chr2 13510151 13510345 -239746238 + MER20 DNA MER1_type 1 198 -21 1075 292 87 22 chr2 13511374 13511836 -239744747 + L1ME1 LINE L1 21 512 -5911 665 286 26 40 chr2 13512154 13512427 -239744156 + L1ME1 LINE L1 970 1238 -5185 498 307 61 44 chr2 13512465 13513134 -239743449 + L1ME1 LINE L1 1367 2217 -4724 313 294 159 19 chr2 13513146 13513455 -239743128 + L1ME1 LINE L1 2382 2733 -4389 599 274 89 23 chr2 13513599 13513953 -239742630 + L1ME1 LINE L1 2904 3248 -3693 2331 57 7 3 chr2 13513953 13514251 -239742332 - AluY SINE Alu -12 299 1 599 274 89 23 chr2 13514251 13514311 -239742272 + L1ME1 LINE L1 3248 3303 -3638 1756 252 70 51 chr2 13514318 13515866 -239740717 + L1ME1 LINE L1 5178 6750 -211 29 90 0 0 chr2 13516636 13516714 -239739869 + AT_rich Low_complexity Low_complexity 1 78 0 386 118 0 26 chr2 13518876 13518952 -239737631 + (TTCCC)n Simple_repeat Simple_repeat 1 74 0 1915 129 10 26 chr2 13518952 13519254 -239737329 - AluSx SINE Alu -15 297 1 2029 147 39 0 chr2 13520053 13520387 -239736196 - MER7A DNA MER2_type 0 346 2 22 0 0 0 chr2 13520891 13520913 -239735670 + AT_rich Low_complexity Low_complexity 1 22 0 344 291 129 43 chr2 13521734 13521944 -239734639 + HAL1 LINE L1 1425 1652 -855 28 29 0 0 chr2 13522161 13522196 -239734387 + AT_rich Low_complexity Low_complexity 1 35 0 321 332 89 59 chr2 13522411 13522682 -239733901 + L2 LINE L2 3031 3309 -4 228 237 0 52 chr2 13522783 13522880 -239733703 + A-rich Low_complexity Low_complexity 6 97 0 944 271 66 11 chr2 13522895 13523245 -239733338 + L1MCb LINE L1 36 404 -5641 633 194 129 16 chr2 13523256 13523530 -239733053 + L1MC3 LINE L1 5180 5481 -761 333 51 67 67 chr2 13523608 13523786 -239732797 + (TA)n Simple_repeat Simple_repeat 2 179 0 523 23 35 23 chr2 13523903 13523990 -239732593 + (TA)n Simple_repeat Simple_repeat 1 88 0 4525 220 27 15 chr2 13523991 13524335 -239732248 + L1MC3 LINE L1 5488 5827 -1958 4009 57 0 6 chr2 13524335 13524845 -239731738 + L1PA6 LINE L1 5648 6154 0 4525 220 27 15 chr2 13524845 13525618 -239730965 + L1MC3 LINE L1 5827 6618 -1167 498 147 0 0 chr2 13526284 13526359 -239730224 + AluSg/x SINE Alu 211 285 -27 507 331 39 33 chr2 13526420 13526838 -239729745 + L1MC/D LINE L1 5317 5744 -506 23 0 0 0 chr2 13527072 13527095 -239729488 + AT_rich Low_complexity Low_complexity 1 23 0 5355 162 21 26 chr2 13527097 13527675 -239728908 - L1MA4 LINE L1 -9 6291 5712 2211 73 4 0 chr2 13527675 13527949 -239728634 + AluY SINE Alu 21 295 -16 5355 162 21 26 chr2 13527949 13529079 -239727504 - L1MA4 LINE L1 -588 5712 4386 21 89 0 0 chr2 13529088 13529144 -239727439 + AT_rich Low_complexity Low_complexity 1 56 0 198 138 58 11 chr2 13529145 13529232 -239727351 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 38 51 0 0 chr2 13529236 13529295 -239727288 + AT_rich Low_complexity Low_complexity 1 59 0 3322 156 36 21 chr2 13529295 13529925 -239726658 - L1MA4 LINE L1 -1754 4392 3753 852 167 5 31 chr2 13529945 13530167 -239726416 + SVA Other Other 461 676 -710 751 201 34 130 chr2 13530306 13530586 -239725997 + MLT1A1 LTR MaLR 74 321 -44 1654 158 49 38 chr2 13530586 13530954 -239725629 + THE1C LTR MaLR 4 375 0 751 201 34 130 chr2 13530954 13530996 -239725587 + MLT1A1 LTR MaLR 321 365 0 1498 189 50 15 chr2 13531001 13531340 -239725243 + L1MC3 LINE L1 7411 7761 -24 4253 255 65 21 chr2 13532168 13532969 -239723614 + L1MDa LINE L1 510 1400 -5140 3921 61 0 0 chr2 13532969 13533462 -239723121 + L1PA5 LINE L1 5662 6154 0 4253 255 65 21 chr2 13533462 13534066 -239722517 + L1MDa LINE L1 1400 1976 -4564 1537 190 3 10 chr2 13534095 13534280 -239722303 - AluY SINE Alu 0 311 127 303 28 0 0 chr2 13534280 13534316 -239722267 + (TG)n Simple_repeat Simple_repeat 1 36 0 1537 190 3 10 chr2 13534316 13534430 -239722153 - AluY SINE Alu -184 127 14 2037 224 75 45 chr2 13534537 13534901 -239721682 + L1MD2 LINE L1 1614 1965 -4575 2345 78 16 0 chr2 13534901 13535082 -239721501 - AluY SINE Alu 0 311 121 369 0 0 0 chr2 13535082 13535123 -239721460 + (TG)n Simple_repeat Simple_repeat 2 42 0 2345 78 16 0 chr2 13535123 13535247 -239721336 - AluY SINE Alu -190 121 1 2037 224 75 45 chr2 13535247 13535665 -239720918 + L1MD2 LINE L1 1965 2420 -4120 1702 187 9 3 chr2 13535676 13536013 -239720570 - L1P LINE L1 -1352 4794 4456 4833 180 13 33 chr2 13536014 13536462 -239720121 + L1PA16 LINE L1 4924 5380 -786 2274 74 6 19 chr2 13536462 13536773 -239719810 + AluY SINE Alu 1 307 -4 4833 180 13 33 chr2 13536773 13537582 -239719001 + L1PA16 LINE L1 5380 6166 0 21 0 0 0 chr2 13537609 13537630 -239718953 + AT_rich Low_complexity Low_complexity 1 21 0 1040 256 95 7 chr2 13537633 13538327 -239718256 + L1MD2 LINE L1 2453 3204 -3336 258 250 0 42 chr2 13538327 13538399 -239718184 + AluYa8 SINE Alu 116 184 -116 4634 252 72 60 chr2 13538404 13540128 -239716455 + L1MD2 LINE L1 3540 5242 -1511 1520 229 37 0 chr2 13540128 13540478 -239716105 + MLT1A1 LTR MaLR 3 365 0 4634 252 72 60 chr2 13540478 13541499 -239715084 + L1MD2 LINE L1 5242 6249 -504 252 77 0 0 chr2 13541499 13541538 -239715045 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 3729 16 0 5 chr2 13541541 13541971 -239714612 - L1PA3 LINE L1 -15 6140 5713 4634 252 72 60 chr2 13541971 13542353 -239714230 + L1MD2 LINE L1 6250 6732 -21 1683 241 21 58 chr2 13542579 13543098 -239713485 + MLT1D LTR MaLR 6 505 0 284 224 9 93 chr2 13544041 13544148 -239712435 + MLT1J2 LTR MaLR 350 447 -3 194 253 72 12 chr2 13544151 13544234 -239712349 - L2 LINE L2 -1081 2233 2146 21 57 0 0 chr2 13544833 13544868 -239711715 + AT_rich Low_complexity Low_complexity 1 35 0 182 371 131 11 chr2 13545716 13545891 -239710692 - MIR SINE MIR -10 252 57 3890 224 50 15 chr2 13546813 13548285 -239708298 + L1MC2 LINE L1 4593 6120 -224 30 45 0 0 chr2 13548500 13548544 -239708039 + AT_rich Low_complexity Low_complexity 1 44 0 7080 35 0 1 chr2 13548562 13549420 -239707163 - L1PA4 LINE L1 -4 6151 5295 * 14074 25 1 0 chr2 13549415 13551090 -239705493 + L1PA4 LINE L1 3620 5295 -851 23 0 0 0 chr2 13551097 13551120 -239705463 + AT_rich Low_complexity Low_complexity 1 23 0 2204 95 3 0 chr2 13551734 13552028 -239704555 + AluSx SINE Alu 1 295 -17 269 262 184 0 chr2 13552170 13552273 -239704310 + L2 LINE L2 3187 3308 -5 2868 215 5 67 chr2 13552702 13553438 -239703145 - LTR8 LTR ERV1 0 691 1 901 261 5 9 chr2 13555733 13555944 -239700639 - LTR28 LTR ERV1 -324 696 487 235 47 0 47 chr2 13555945 13555988 -239700595 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 7255 31 16 2 chr2 13555988 13557335 -239699248 - L1PA3 LINE L1 -24 6131 4765 786 247 187 28 chr2 13557358 13557712 -239698871 - LTR28 LTR ERV1 -649 371 1 1469 162 23 5 chr2 13557715 13558035 -239698548 - LTR28-int LTR ERV1 -4 7087 4918 8026 150 45 6 chr2 13558036 13559353 -239697230 + THE1C-int LTR MaLR 212 1579 -1 1883 143 67 17 chr2 13559355 13559712 -239696871 + THE1C LTR MaLR 1 375 0 13636 160 36 25 chr2 13559712 13563537 -239693046 - MER52-int LTR ERV1 -524 5422 632 393 204 0 45 chr2 13563558 13563646 -239692937 - MER52-int LTR ERV1 -885 3995 3912 4272 211 27 70 chr2 13563656 13564830 -239691753 - MER52-int LTR ERV1 -440 4777 548 535 189 104 67 chr2 13564827 13564991 -239691592 - MER52-int LTR ERV1 -6516 575 406 * 544 269 96 56 chr2 13564978 13565227 -239691356 - MER52-int LTR ERV1 -6832 259 1 875 278 23 23 chr2 13565275 13565538 -239691045 - LTR28 LTR ERV1 -316 704 442 573 208 13 47 chr2 13565674 13565823 -239690760 - LTR28 LTR ERV1 -874 146 3 248 252 141 0 chr2 13566047 13566128 -239690455 - MIR SINE MIR -94 114 35 1856 40 0 0 chr2 13568862 13569085 -239687498 - L1PA4 LINE L1 -13 6142 5920 197 379 115 21 chr2 13569511 13569746 -239686837 + MIR SINE MIR 5 261 -1 239 203 125 16 chr2 13570498 13570562 -239686021 + L2 LINE L2 3015 3085 -187 1483 276 82 19 chr2 13571105 13571650 -239684933 - L1ME3 LINE L1 -6 6156 5566 1610 182 13 23 chr2 13571650 13571957 -239684626 + AluJb SINE Alu 1 304 -8 1483 276 82 19 chr2 13571957 13572037 -239684546 - L1ME3 LINE L1 -596 5566 5492 427 214 55 41 chr2 13572114 13572259 -239684324 - L1ME1 LINE L1 -18 6148 6002 11999 245 32 14 chr2 13572261 13577077 -239679506 - L1PA16 LINE L1 -285 7319 2449 243 0 0 0 chr2 13577077 13577104 -239679479 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 11999 245 32 14 chr2 13577104 13577380 -239679203 - L1PA16 LINE L1 -5155 2449 2179 373 274 0 0 chr2 13577507 13577613 -239678970 - L1ME3 LINE L1 -885 5474 5369 24 32 0 0 chr2 13577939 13577970 -239678613 + AT_rich Low_complexity Low_complexity 1 31 0 3349 187 16 14 chr2 13579405 13580099 -239676484 + L1P LINE L1 3219 3913 -2233 202 297 184 43 chr2 13580208 13580393 -239676190 - MIR SINE MIR -3 259 49 485 266 29 29 chr2 13580603 13580776 -239675807 - L2 LINE L2 0 3313 3141 1477 299 72 46 chr2 13580820 13582080 -239674503 + L1MCc LINE L1 -498 727 -5689 1662 236 27 42 chr2 13582080 13582554 -239674029 + MLT1C LTR MaLR 1 467 0 1477 299 72 46 chr2 13582554 13582832 -239673751 + L1MCc LINE L1 727 996 -5420 420 20 0 0 chr2 13582832 13582881 -239673702 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1477 299 72 46 chr2 13582881 13582910 -239673673 + L1MCc LINE L1 996 1433 -4983 23 54 0 0 chr2 13582919 13582956 -239673627 + AT_rich Low_complexity Low_complexity 1 37 0 428 234 61 8 chr2 13583128 13583288 -239673295 + L1MCc LINE L1 1710 1825 -4601 4807 154 9 4 chr2 13583288 13584554 -239672029 - L1PA16 LINE L1 -3 6163 4873 2892 226 56 5 chr2 13584576 13585145 -239671438 - L1P LINE L1 -1158 4988 4370 192 77 0 0 chr2 13585145 13585171 -239671412 + (TG)n Simple_repeat Simple_repeat 2 27 0 2892 226 56 5 chr2 13585171 13585357 -239671226 - L1P LINE L1 -1776 4370 4195 704 298 91 14 chr2 13585351 13585865 -239670718 + L1MCc LINE L1 1928 2481 -4126 * 328 284 31 53 chr2 13585886 13586111 -239670472 + L1MCc LINE L1 2727 2946 -3480 1652 192 7 10 chr2 13586215 13586507 -239670076 - AluJb SINE Alu -12 300 10 2280 143 6 19 chr2 13586507 13586872 -239669711 - THE1B LTR MaLR -2 362 3 9083 119 107 2 chr2 13586874 13588304 -239668279 - THE1B-int LTR MaLR 0 1580 1 2055 139 21 48 chr2 13588304 13588678 -239667905 - THE1B LTR MaLR 0 364 1 745 261 62 12 chr2 13588694 13589019 -239667564 + L1MCc LINE L1 3031 3371 -3055 735 228 54 0 chr2 13589019 13589186 -239667397 + LTR47A LTR ERVL 277 452 0 266 302 79 22 chr2 13589202 13589341 -239667242 + LTR47A-int LTR ERVL 15 161 -5182 470 236 6 67 chr2 13589528 13589693 -239666890 + HERV17 LTR ERV1 2131 2285 -2595 2291 249 62 23 chr2 13589717 13590415 -239666168 - MER50 LTR ERV1 0 734 10 775 256 26 64 chr2 13590422 13590794 -239665789 + HERV17 LTR ERV1 1948 2397 -3549 440 211 85 13 chr2 13590792 13590905 -239665678 + HERV17 LTR ERV1 2538 2911 -3352 * 538 191 176 15 chr2 13590914 13591050 -239665533 + MER34C LTR ERV1 160 317 -268 273 103 0 0 chr2 13591050 13591089 -239665494 + HERV17 LTR ERV1 1197 1235 -3888 2714 143 41 12 chr2 13591108 13591625 -239664958 + HERV17 LTR ERV1 1072 1603 -6213 404 148 49 12 chr2 13591625 13591706 -239664877 + MER4A LTR ERV1 1 84 -580 547 186 9 3 chr2 13591706 13591820 -239664763 - LTR10E LTR ERV1 0 590 402 2406 204 80 95 chr2 13591852 13592779 -239663804 + HERV17 LTR ERV1 26 938 -5711 1165 124 81 15 chr2 13592772 13593179 -239663404 + HERV17 LTR ERV1 709 2694 -3955 * 711 287 0 6 chr2 13593170 13593351 -239663232 + HERV17 LTR ERV1 3138 3317 -4468 * 4038 158 32 41 chr2 13593331 13594389 -239662194 + HERV17 LTR ERV1 956 3447 -3202 328 244 171 0 chr2 13594394 13594476 -239662107 - LTR8 LTR ERV1 -438 253 158 2196 79 47 0 chr2 13594476 13594816 -239661767 + MER57-int LTR ERV1 1810 2165 -4731 2505 173 10 5 chr2 13594909 13595446 -239661137 + MER57-int LTR ERV1 2567 4823 -1826 3346 206 0 5 chr2 13595456 13596043 -239660540 + MER57-int LTR ERV1 3376 3959 -2937 2200 162 17 33 chr2 13596202 13596757 -239659826 + LTR10E LTR ERV1 1 602 0 785 156 5 64 chr2 13596776 13596987 -239659596 + MER4A LTR ERV1 261 517 -147 2245 125 91 24 chr2 13596989 13597030 -239659553 + MER57-int LTR ERV1 1791 1828 -5988 3207 80 2 2 chr2 13597030 13597457 -239659126 - LTR3 LTR ERVK -2 427 1 2245 125 91 24 chr2 13597457 13597910 -239658673 + MER57-int LTR ERV1 1828 2318 -5498 3463 123 45 72 chr2 13597911 13598603 -239657980 + MER57-int LTR ERV1 2868 3540 -4276 2439 191 28 2 chr2 13598604 13599034 -239657549 - LTR8 LTR ERV1 -250 441 1 11520 139 30 73 chr2 13599034 13600171 -239656412 + MER57-int LTR ERV1 3073 4258 -3160 1758 118 50 4 chr2 13600171 13600456 -239656127 + AluSx SINE Alu 11 307 0 11520 139 30 73 chr2 13600456 13601234 -239655349 + MER57-int LTR ERV1 4258 4866 -2552 2153 132 3 0 chr2 13601234 13601544 -239655039 + AluSp SINE Alu 1 311 -2 11520 139 30 73 chr2 13601544 13602033 -239654550 + MER57-int LTR ERV1 4866 5375 -2043 3932 118 38 12 chr2 13602032 13602759 -239653824 + MER57-int LTR ERV1 5249 6223 -1593 * 381 93 0 0 chr2 13602864 13602918 -239653665 + (TG)n Simple_repeat Simple_repeat 1 54 0 341 363 45 5 chr2 13603373 13603574 -239653009 - MIR SINE MIR -3 259 51 2072 128 0 24 chr2 13604385 13604683 -239651900 - AluSx SINE Alu -21 291 1 21 0 0 0 chr2 13605288 13605309 -239651274 + AT_rich Low_complexity Low_complexity 1 21 0 190 328 0 0 chr2 13605648 13605709 -239650874 + MIR SINE MIR 172 232 -30 234 275 50 12 chr2 13606195 13606275 -239650308 + MIR SINE MIR 132 214 -48 2581 118 3 0 chr2 13606334 13606697 -239649886 + THE1B LTR MaLR 1 364 0 27 73 0 0 chr2 13607835 13607890 -239648693 + AT_rich Low_complexity Low_complexity 1 55 0 237 180 62 47 chr2 13608039 13608167 -239648416 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 * 344 182 85 0 chr2 13608119 13608284 -239648299 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 347 182 45 28 chr2 13608178 13608354 -239648229 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 32 0 0 0 chr2 13608354 13608386 -239648197 + AT_rich Low_complexity Low_complexity 1 32 0 259 234 29 29 chr2 13608389 13608560 -239648023 + (TTATA)n Simple_repeat Simple_repeat 5 175 0 * 360 207 59 6 chr2 13608549 13608718 -239647865 + (TA)n Simple_repeat Simple_repeat 2 179 0 296 289 50 69 chr2 13608809 13608968 -239647615 + MIR SINE MIR 36 191 -71 238 291 64 73 chr2 13609300 13609410 -239647173 - L2 LINE L2 0 3272 3164 351 44 0 0 chr2 13611601 13611646 -239644937 + (CA)n Simple_repeat Simple_repeat 2 46 0 2350 74 3 13 chr2 13611817 13612128 -239644455 + AluY SINE Alu 3 310 -1 291 294 20 0 chr2 13612328 13612430 -239644153 + L1MCb LINE L1 1 104 -5941 627 244 19 33 chr2 13612448 13612661 -239643922 + L1MCb LINE L1 1560 1769 -4795 658 250 11 44 chr2 13612666 13612846 -239643737 - MIR SINE MIR -87 175 2 280 226 145 0 chr2 13613749 13613811 -239642772 + MER69 DNA AcHobo 4 74 -2452 792 279 9 9 chr2 13613907 13614122 -239642461 + MER20 DNA MER1_type 1 215 -4 1876 123 44 82 chr2 13614168 13614558 -239642025 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr2 13614816 13614844 -239641739 + AT_rich Low_complexity Low_complexity 1 28 0 333 47 0 0 chr2 13615946 13615989 -239640594 + (TG)n Simple_repeat Simple_repeat 2 44 0 182 348 99 51 chr2 13617763 13618096 -239638487 + L3b LINE CR1 1104 1452 -131 729 154 0 0 chr2 13619232 13619355 -239637228 - AluSc SINE Alu -22 287 165 1000 271 100 12 chr2 13620032 13620372 -239636211 + MLT1B LTR MaLR 1 370 -20 887 81 81 0 chr2 13620555 13620679 -239635904 + MER85 DNA T2_type 1 134 -5 251 221 63 16 chr2 13621146 13621273 -239635310 + (CATATA)n Simple_repeat Simple_repeat 5 137 0 23 0 0 0 chr2 13621363 13621386 -239635197 + AT_rich Low_complexity Low_complexity 1 23 0 212 371 77 21 chr2 13622254 13622397 -239634186 + MIR SINE MIR 91 241 -21 1041 181 160 0 chr2 13623045 13623283 -239633300 + MLT2D LTR ERVL 1 276 -138 1201 216 0 0 chr2 13623283 13623510 -239633073 + ERVL-D LTR ERVL 882 1108 -4656 5485 162 38 22 chr2 13623534 13624561 -239632022 + ERVL-D LTR ERVL 4715 5757 -7 988 137 0 0 chr2 13624561 13624707 -239631876 + MLT2D LTR ERVL 1 146 -268 1298 176 117 0 chr2 13624708 13624947 -239631636 - MLT1A1 LTR MaLR 0 365 99 28 48 0 0 chr2 13627100 13627142 -239629441 + AT_rich Low_complexity Low_complexity 1 42 0 2131 78 3 7 chr2 13628007 13628352 -239628231 - AluY SINE Alu 0 344 1 220 281 0 0 chr2 13629258 13629315 -239627268 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 192 238 0 0 chr2 13629319 13629382 -239627201 + (TG)n Simple_repeat Simple_repeat 2 64 0 24 32 0 0 chr2 13629529 13629560 -239627023 + AT_rich Low_complexity Low_complexity 1 31 0 861 153 0 0 chr2 13629774 13629905 -239626678 - FLAM_C SINE Alu -2 131 1 1636 210 21 0 chr2 13630023 13630357 -239626226 - MER58B DNA MER1_type 0 341 1 1044 197 14 10 chr2 13631032 13631240 -239625343 + MER2 DNA MER2_type 3 211 -134 34 0 0 0 chr2 13631541 13631575 -239625008 + AT_rich Low_complexity Low_complexity 1 34 0 29 28 0 0 chr2 13631629 13631665 -239624918 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chr2 13632293 13632330 -239624253 + AT_rich Low_complexity Low_complexity 1 37 0 7408 34 2 0 chr2 13632688 13633901 -239622682 - L1PA4 LINE L1 0 6155 4941 10615 37 8 1 chr2 13633901 13635219 -239621364 + L1P LINE L1 2935 4262 -1884 2416 144 61 15 chr2 13635387 13635556 -239621027 + LTR1B LTR ERV1 1 161 -665 2026 153 30 33 chr2 13635556 13635921 -239620662 - THE1B LTR MaLR 0 364 1 2416 144 61 15 chr2 13635921 13636498 -239620085 + LTR1B LTR ERV1 161 826 0 216 0 0 0 chr2 13636922 13636946 -239619637 + (TG)n Simple_repeat Simple_repeat 2 25 0 233 360 10 10 chr2 13637061 13637161 -239619422 + MLT1L LTR MaLR 432 531 -84 21 0 0 0 chr2 13639755 13639776 -239616807 + AT_rich Low_complexity Low_complexity 1 21 0 459 317 124 16 chr2 13639854 13640103 -239616480 + MER110-int LTR ERV1 159 434 -4213 255 164 60 30 chr2 13641862 13641929 -239614654 - MADE1 DNA Mariner -11 69 1 253 125 0 0 chr2 13643248 13643288 -239613295 - Alu SINE Alu -10 290 251 * 453 197 6 142 chr2 13643283 13643466 -239613117 - MER99 DNA DNA -478 350 193 1648 206 9 24 chr2 13643780 13644119 -239612464 - MLT1A1 LTR MaLR -13 352 19 353 259 89 51 chr2 13644126 13644284 -239612299 + MIR SINE MIR 91 254 -8 21 0 0 0 chr2 13644797 13644818 -239611765 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 13645036 13645065 -239611518 + AT_rich Low_complexity Low_complexity 1 29 0 650 248 100 19 chr2 13645127 13645337 -239611246 - MER89 LTR ERV1 -5 554 328 2974 151 41 12 chr2 13645341 13645927 -239610656 + MER4B LTR ERV1 1 769 -10 443 247 45 0 chr2 13645936 13646144 -239610439 - MER89 LTR ERV1 -233 326 11 22 80 0 0 chr2 13646280 13646330 -239610253 + AT_rich Low_complexity Low_complexity 1 50 0 3568 168 39 16 chr2 13646563 13647273 -239609310 - LTR8A LTR ERV1 0 727 1 42507 36 24 1 chr2 13647492 13653506 -239603077 - L1PA3 LINE L1 0 6155 1 197 126 87 10 chr2 13653852 13653955 -239602628 + (TA)n Simple_repeat Simple_repeat 1 111 0 287 347 57 0 chr2 13653988 13654112 -239602471 - L2 LINE L2 -2 3270 3140 1851 163 39 33 chr2 13654112 13654474 -239602109 + THE1B LTR MaLR 1 364 0 11009 117 10 0 chr2 13654474 13656038 -239600545 + THE1B-int LTR MaLR 1 1580 0 1643 181 47 33 chr2 13656038 13656397 -239600186 + THE1B LTR MaLR 1 364 0 436 146 101 0 chr2 13656426 13656515 -239600068 + MER4A LTR ERV1 1 98 -566 1788 107 161 83 chr2 13656515 13656888 -239599695 + MER4A LTR ERV1 261 662 -2 2477 121 72 34 chr2 13656893 13657440 -239599143 + MER4A-int LTR ERV1 1 612 -5986 385 143 0 43 chr2 13657434 13657504 -239599079 + MER4A-int LTR ERV1 733 799 -5799 * 311 137 0 0 chr2 13657574 13657625 -239598958 + MER4A-int LTR ERV1 836 886 -5712 * 1129 93 164 52 chr2 13657623 13657928 -239598655 + MER4A-int LTR ERV1 518 749 -4266 3908 97 55 21 chr2 13657960 13658630 -239597953 + MER4A-int LTR ERV1 1803 2495 -4103 1248 184 57 4 chr2 13658630 13658874 -239597709 - LTR8 LTR ERV1 -434 257 1 1159 133 0 9 chr2 13658874 13659092 -239597491 + MER4A-int LTR ERV1 2737 2952 -3646 25435 136 14 72 chr2 13659101 13664103 -239592480 + L1P LINE L1 11 4726 -1420 7336 28 1 0 chr2 13664103 13665001 -239591582 + L1PA3 LINE L1 5283 6183 0 373 208 0 0 chr2 13665001 13665073 -239591510 + MER4A-int LTR ERV1 2150 2221 -4537 215 59 0 29 chr2 13665078 13665112 -239591471 + (TA)n Simple_repeat Simple_repeat 2 34 0 6054 127 41 17 chr2 13665142 13666221 -239590362 + MER4A-int LTR ERV1 3921 5025 -1573 5553 120 63 34 chr2 13666223 13667233 -239589350 + MER4A-int LTR ERV1 5557 6596 -2 454 167 89 0 chr2 13667241 13667331 -239589252 + MER4A LTR ERV1 1 98 -566 1558 133 42 75 chr2 13667331 13667688 -239588895 + MER4A LTR ERV1 261 664 0 284 337 98 10 chr2 13668607 13668800 -239587783 + MIR SINE MIR 53 262 0 1177 251 85 6 chr2 13669434 13669764 -239586819 - MLT1A2 LTR MaLR 0 374 19 21 0 0 0 chr2 13670061 13670082 -239586501 + AT_rich Low_complexity Low_complexity 1 21 0 611 272 42 33 chr2 13670467 13670680 -239585903 + MIR SINE MIR 2 216 -46 356 330 115 18 chr2 13670703 13670921 -239585662 - L2 LINE L2 -70 3243 3005 217 267 42 91 chr2 13670928 13671093 -239585490 - L2 LINE L2 -520 2794 2638 322 214 179 0 chr2 13671445 13671529 -239585054 - L1MD2 LINE L1 -55 6304 6206 346 264 9 27 chr2 13671540 13671650 -239584933 - L1MD2 LINE L1 -214 6145 6038 871 213 51 94 chr2 13671660 13671765 -239584818 - L1M4 LINE L1 -3136 3010 2902 1117 210 90 26 chr2 13671765 13672108 -239584475 - MLT1A1 LTR MaLR 0 365 1 871 213 51 94 chr2 13672108 13672373 -239584210 - L1M4 LINE L1 -3244 2902 2656 466 271 135 35 chr2 13674085 13674373 -239582210 - MER110A LTR ERV1 -81 387 71 245 155 31 216 chr2 13675119 13675216 -239581367 - MLT1E2 LTR MaLR -537 89 11 2309 79 0 16 chr2 13675357 13675673 -239580910 - AluY SINE Alu 0 311 1 620 300 67 62 chr2 13675726 13676234 -239580349 + L1ME LINE L1 20 533 -5537 240 111 0 0 chr2 13676234 13676270 -239580313 + (CAT)n Simple_repeat Simple_repeat 2 37 0 620 300 67 62 chr2 13676270 13676328 -239580255 + L1ME LINE L1 533 589 -5481 2023 112 0 11 chr2 13676402 13676731 -239579852 + AluSx SINE Alu 1 326 0 1407 277 27 10 chr2 13676986 13677474 -239579109 + L1M4 LINE L1 3330 3825 -2321 849 248 128 24 chr2 13677551 13678136 -239578447 + L1ME LINE L1 2562 3207 -2873 1034 275 67 49 chr2 13678143 13678900 -239577683 + L1ME1 LINE L1 2785 3555 -2525 1001 266 105 6 chr2 13678902 13679225 -239577358 + L1ME1 LINE L1 3702 4056 -2024 1330 273 31 33 chr2 13679331 13679880 -239576703 + L1ME1 LINE L1 5550 6097 -3 2050 253 68 19 chr2 13682285 13683219 -239573364 + MER45B DNA AcHobo 33 1040 0 1174 240 0 91 chr2 13683215 13683557 -239573026 + MER77 LTR ERV1 1 311 -294 * 837 231 16 0 chr2 13683543 13683725 -239572858 + MER77 LTR ERV1 421 605 0 * 701 206 43 70 chr2 13683881 13684221 -239572362 - L1 LINE L1 -869 5277 4964 450 127 0 0 chr2 13684223 13684294 -239572289 + (TCC)n Simple_repeat Simple_repeat 3 73 0 794 245 51 15 chr2 13685209 13685405 -239571178 + L1MDa LINE L1 75 277 -6263 260 247 0 27 chr2 13685408 13685481 -239571102 + A-rich Low_complexity Low_complexity 2 72 0 9392 189 57 61 chr2 13685511 13685699 -239570884 - L1M4c LINE L1 -3899 2485 2298 1847 99 88 0 chr2 13685699 13685962 -239570621 - AluSq SINE Alu -13 300 15 372 62 0 0 chr2 13685962 13686010 -239570573 - Alu SINE Alu -252 48 1 9392 189 57 61 chr2 13686010 13688245 -239568338 - L1M4c LINE L1 -4084 2300 24 1771 91 4 8 chr2 13688322 13688563 -239568020 - AluSg/x SINE Alu -7 305 66 442 290 19 26 chr2 13688692 13688847 -239567736 + MIR SINE MIR 103 256 -6 437 287 20 20 chr2 13689121 13689365 -239567218 + L1MDa LINE L1 2188 2431 -4111 2228 65 0 49 chr2 13689667 13689974 -239566609 - AluY SINE Alu -19 292 1 288 188 0 0 chr2 13690576 13690624 -239565959 - LTR22A LTR ERVK 0 458 411 216 162 27 0 chr2 13691455 13691492 -239565091 - L2 LINE L2 -9 3304 3267 219 387 45 67 chr2 13691874 13692499 -239564084 - L2 LINE L2 -458 2856 2246 1522 191 33 60 chr2 13693616 13693982 -239562601 - MLT1B LTR MaLR 0 390 35 364 148 2 68 chr2 13694085 13694174 -239562409 + Alu SINE Alu 234 302 0 194 301 84 48 chr2 13695227 13695310 -239561273 + L2 LINE L2 3228 3313 0 185 280 80 50 chr2 13695998 13696098 -239560485 + L2 LINE L2 2753 2855 -459 2186 108 0 0 chr2 13696231 13696527 -239560056 - AluSp SINE Alu -11 302 7 186 43 0 0 chr2 13696888 13696911 -239559672 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 13697377 13697398 -239559185 + AT_rich Low_complexity Low_complexity 1 21 0 4297 156 38 7 chr2 13698034 13698799 -239557784 - Tigger3(Golem) DNA MER2_type -1 3028 2240 514 257 28 0 chr2 13698797 13698906 -239557677 - Tigger3(Golem) DNA MER2_type -2917 112 1 * 22 35 0 0 chr2 13698999 13699028 -239557555 + AT_rich Low_complexity Low_complexity 1 29 0 405 155 0 56 chr2 13701539 13701610 -239554973 - AluJ/FRAM SINE Alu -20 292 226 189 340 116 14 chr2 13701634 13701781 -239554802 - L2 LINE L2 -977 2337 2176 32 43 0 0 chr2 13701988 13702034 -239554549 + AT_rich Low_complexity Low_complexity 1 46 0 2658 259 83 12 chr2 13702425 13702999 -239553584 + L1MC1 LINE L1 4431 4963 -1370 2034 94 14 0 chr2 13702999 13703285 -239553298 + AluY SINE Alu 1 290 -21 2658 259 83 12 chr2 13703285 13704373 -239552210 + L1MC1 LINE L1 4963 6272 -61 2118 268 37 51 chr2 13704476 13706236 -239550347 + L1M4c LINE L1 23 1924 -4460 1517 210 35 24 chr2 13706409 13706780 -239549803 - MLT1-int LTR MaLR -45 1326 952 311 379 21 7 chr2 13706971 13707116 -239549467 + MIR SINE MIR 8 154 -108 258 336 62 34 chr2 13707649 13707795 -239548788 + MIR SINE MIR 20 169 -93 1021 249 62 24 chr2 13709292 13709629 -239546954 - L1MD2 LINE L1 -19 6340 5991 249 159 0 0 chr2 13709646 13709690 -239546893 - L1M4 LINE L1 -1588 4558 4515 11528 175 25 20 chr2 13709724 13710004 -239546579 - L1 LINE L1 -2646 4919 4642 2068 117 0 0 chr2 13710004 13710295 -239546288 - AluSc SINE Alu -18 291 1 11528 175 25 20 chr2 13710295 13713260 -239543323 - L1 LINE L1 -2923 4642 1688 30 45 0 0 chr2 13713376 13713420 -239543163 + AT_rich Low_complexity Low_complexity 1 44 0 184 375 0 11 chr2 13713862 13713950 -239542633 - MIR SINE MIR -122 140 54 1905 147 0 3 chr2 13714049 13714341 -239542242 + AluSq SINE Alu 2 292 -21 957 120 0 0 chr2 13714361 13714494 -239542089 + AluSg/x SINE Alu 169 301 -11 714 129 0 4 chr2 13716058 13716173 -239540410 - LTR12 LTR ERV1 0 714 175 306 263 20 10 chr2 13716175 13716274 -239540309 - LTR30 LTR ERV1 -79 643 544 579 213 155 24 chr2 13716274 13716481 -239540102 - LTR12 LTR ERV1 -437 277 44 227 209 0 0 chr2 13716481 13716524 -239540059 - LTR30 LTR ERV1 -679 43 1 367 307 49 79 chr2 13716599 13717065 -239539518 + L2 LINE L2 1938 2389 -925 223 350 56 49 chr2 13717088 13717231 -239539352 + L2 LINE L2 2551 2694 -620 1037 201 23 9 chr2 13717294 13717513 -239539070 + MLT1C LTR MaLR 3 224 -243 730 176 34 128 chr2 13717535 13717667 -239538916 + MER2 DNA MER2_type 8 116 -229 1852 125 3 26 chr2 13717667 13717970 -239538613 - AluSx SINE Alu -16 296 1 730 176 34 128 chr2 13717970 13718041 -239538542 + MER2 DNA MER2_type 116 192 -153 679 234 160 5 chr2 13718085 13718273 -239538310 + MLT1C LTR MaLR 250 466 -1 24 0 0 0 chr2 13720342 13720366 -239536217 + AT_rich Low_complexity Low_complexity 1 24 0 315 288 144 8 chr2 13720589 13720714 -239535869 + MIR SINE MIR 121 262 0 229 331 141 0 chr2 13721513 13721634 -239534949 - L2 LINE L2 -4 3309 3172 9162 31 1 1 chr2 13721678 13722781 -239533802 - L1PA3 LINE L1 -1909 4237 3135 9767 25 1 0 chr2 13722781 13724717 -239531866 + L1PA3 LINE L1 4223 6162 0 29 94 0 0 chr2 13724758 13724843 -239531740 + AT_rich Low_complexity Low_complexity 1 85 0 219 129 0 48 chr2 13726924 13726986 -239529597 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 989 208 11 0 chr2 13727116 13727299 -239529284 - MER5A DNA MER1_type -3 186 2 1627 181 178 6 chr2 13727452 13727817 -239528766 + MSTA LTR MaLR 1 428 0 216 287 69 23 chr2 13727848 13727935 -239528648 + MIR3 SINE MIR 64 154 -54 22 0 0 0 chr2 13728308 13728330 -239528253 + AT_rich Low_complexity Low_complexity 1 22 0 422 306 37 50 chr2 13728364 13728606 -239527977 + L2 LINE L2 3075 3313 0 225 0 0 0 chr2 13728692 13728717 -239527866 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 385 275 80 55 chr2 13729153 13729353 -239527230 + MIR SINE MIR 56 260 -2 208 333 16 0 chr2 13730186 13730249 -239526334 - L2 LINE L2 -3 3310 3247 1118 204 0 27 chr2 13730254 13730474 -239526109 - MER20 DNA MER1_type -5 214 1 246 351 38 15 chr2 13730686 13730817 -239525766 - MIR SINE MIR -6 256 123 1863 137 7 0 chr2 13730851 13731156 -239525427 + AluSg SINE Alu 1 307 0 22 0 0 0 chr2 13732268 13732290 -239524293 + AT_rich Low_complexity Low_complexity 1 22 0 195 309 16 81 chr2 13732415 13732538 -239524045 - L2 LINE L2 -209 3063 2949 369 320 109 0 chr2 13732678 13732853 -239523730 - MIR SINE MIR -27 235 42 1149 86 0 0 chr2 13733428 13733994 -239522589 + (TA)n Simple_repeat Simple_repeat 1 566 0 231 61 0 0 chr2 13734186 13734219 -239522364 + (TA)n Simple_repeat Simple_repeat 2 34 0 229 44 89 0 chr2 13734347 13734392 -239522191 + (TTATA)n Simple_repeat Simple_repeat 1 49 0 501 52 67 22 chr2 13734528 13734663 -239521920 + (TA)n Simple_repeat Simple_repeat 2 142 0 181 390 7 58 chr2 13734724 13734878 -239521705 + L2 LINE L2 2948 3093 -179 1344 213 49 47 chr2 13735027 13735462 -239521121 + MLT2D LTR ERVL 1 464 0 23 0 0 0 chr2 13735466 13735489 -239521094 + AT_rich Low_complexity Low_complexity 1 23 0 413 257 83 9 chr2 13735733 13735842 -239520741 + MIR SINE MIR 33 149 -59 324 0 0 0 chr2 13736885 13736921 -239519662 + (TTA)n Simple_repeat Simple_repeat 3 38 0 1511 165 37 77 chr2 13737104 13737566 -239519017 - MER67C LTR ERV1 -100 414 1 27 29 0 0 chr2 13737682 13737716 -239518867 + AT_rich Low_complexity Low_complexity 1 34 0 430 314 30 24 chr2 13738175 13738344 -239518239 - MIR SINE MIR -28 234 65 189 0 0 0 chr2 13738704 13738725 -239517858 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 22 56 0 0 chr2 13738981 13739017 -239517566 + AT_rich Low_complexity Low_complexity 1 36 0 213 328 33 66 chr2 13739021 13739143 -239517440 + MIR3 SINE MIR 67 184 -24 342 0 0 0 chr2 13739296 13739334 -239517249 + (TA)n Simple_repeat Simple_repeat 2 39 0 1330 197 66 138 chr2 13739386 13739888 -239516695 + MLT1E2 LTR MaLR 36 501 -125 247 240 37 51 chr2 13739910 13740012 -239516571 - MIR SINE MIR -56 206 106 514 204 9 4 chr2 13740056 13740170 -239516413 + MLT1D LTR MaLR 358 505 0 3688 151 27 3 chr2 13740210 13740840 -239515743 + L1PA13 LINE L1 5513 6157 -6 185 348 0 29 chr2 13740927 13740996 -239515587 + L2 LINE L2 3179 3245 -68 24 0 0 0 chr2 13742082 13742106 -239514477 + AT_rich Low_complexity Low_complexity 1 24 0 1512 162 16 67 chr2 13742445 13742759 -239513824 - AluJo SINE Alu -14 298 1 353 362 74 28 chr2 13742811 13743270 -239513313 - L1MEc LINE L1 -4789 1607 1128 198 236 0 0 chr2 13743279 13743334 -239513249 + (CATA)n Simple_repeat Simple_repeat 2 56 0 24 0 0 0 chr2 13743462 13743486 -239513097 + AT_rich Low_complexity Low_complexity 1 24 0 301 111 254 0 chr2 13743910 13743973 -239512610 + MADE1 DNA Mariner 2 80 0 254 295 92 30 chr2 13744053 13744358 -239512225 + L1ME3A LINE L1 4919 5242 -904 679 233 90 29 chr2 13744397 13744642 -239511941 + L1ME3A LINE L1 5898 6157 -13 217 221 26 13 chr2 13744790 13744867 -239511716 + (TA)n Simple_repeat Simple_repeat 1 78 0 446 79 13 26 chr2 13745129 13745205 -239511378 - L1PA11 LINE L1 -2749 3397 3323 * 11559 138 25 1 chr2 13745195 13747910 -239508673 + L1PA11 LINE L1 3399 6174 0 444 290 19 26 chr2 13748585 13748740 -239507843 + MIR SINE MIR 103 256 -6 23 0 0 0 chr2 13749106 13749129 -239507454 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 13749555 13749585 -239506998 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 13749606 13749641 -239506942 + AT_rich Low_complexity Low_complexity 1 35 0 638 254 63 54 chr2 13749995 13750329 -239506254 + L1M4 LINE L1 2637 2973 -3173 204 206 0 0 chr2 13751972 13752006 -239504577 + (TTG)n Simple_repeat Simple_repeat 2 35 0 659 185 7 44 chr2 13752229 13752364 -239504219 - FLAM_C SINE Alu -3 130 1 2055 132 63 17 chr2 13752445 13752793 -239503790 + THE1B LTR MaLR 1 364 0 201 322 51 94 chr2 13752860 13753115 -239503468 + L2 LINE L2 2685 2928 -386 387 222 85 59 chr2 13753532 13753685 -239502898 + L1MEc LINE L1 43 199 -6197 546 113 0 0 chr2 13753898 13753978 -239502605 + MADE1 DNA Mariner 1 80 0 212 280 0 0 chr2 13754558 13754608 -239501975 - L2 LINE L2 -15 3298 3249 651 141 7 40 chr2 13754639 13754788 -239501795 + L1MA9 LINE L1 6169 6312 0 555 286 93 88 chr2 13754808 13755195 -239501388 - LTR41 LTR ERVL -6 767 375 368 282 27 18 chr2 13755195 13755305 -239501278 - MER81 DNA DNA 0 114 4 555 286 93 88 chr2 13755305 13755465 -239501118 - LTR41 LTR ERVL -398 375 217 430 290 47 31 chr2 13756448 13756641 -239499942 - MIR SINE MIR -15 247 52 353 299 51 16 chr2 13757001 13757255 -239499328 + L1ME LINE L1 5562 5824 -297 5674 143 13 7 chr2 13757296 13758484 -239498099 + L1PB1 LINE L1 4956 6149 -2 258 272 39 10 chr2 13758595 13758698 -239497885 - MER5C DNA MER1_type -1 323 218 222 234 287 0 chr2 13758724 13758818 -239497765 - MER5C DNA MER1_type -200 124 4 359 254 146 0 chr2 13759539 13759649 -239496934 + MLT1H1 LTR MaLR 37 162 -393 2589 183 19 10 chr2 13759766 13760247 -239496336 - LTR45B LTR ERV1 0 489 5 222 363 101 50 chr2 13760356 13761155 -239495428 + L2 LINE L2 2206 3053 -219 617 209 105 0 chr2 13761399 13761620 -239494963 + L1M4 LINE L1 5122 5363 -802 271 240 0 0 chr2 13761635 13761685 -239494898 - L1M4b LINE L1 -6797 62 13 205 182 45 0 chr2 13761869 13761913 -239494670 + T-rich Low_complexity Low_complexity 2 47 0 405 276 22 77 chr2 13762617 13762798 -239493785 - MIR SINE MIR -13 249 79 25 0 0 0 chr2 13764090 13764115 -239492468 + AT_rich Low_complexity Low_complexity 1 25 0 809 168 0 0 chr2 13764115 13764258 -239492325 - L1MA4 LINE L1 -9 6291 6149 1364 48 0 5 chr2 13764258 13764471 -239492112 - L1P3 LINE L1 -733 5439 5228 5240 53 12 0 chr2 13764471 13765130 -239491453 + L1PA8 LINE L1 5502 6172 0 8200 178 25 41 chr2 13765138 13767342 -239489241 + L1M1 LINE L1 16 2859 -4706 2302 138 3 3 chr2 13767333 13767702 -239488881 + L1MA3 LINE L1 5484 5852 -453 * 1133 122 5 70 chr2 13767696 13767872 -239488711 - L1M1 LINE L1 -487 5813 5652 * 2140 153 3 27 chr2 13767872 13768245 -239488338 - THE1B LTR MaLR 0 364 1 1133 122 5 70 chr2 13768245 13768281 -239488302 - L1M1 LINE L1 -648 5652 5615 462 327 48 24 chr2 13768400 13768648 -239487935 - MIR SINE MIR -1 261 8 1847 162 3 3 chr2 13769100 13769409 -239487174 + AluSx SINE Alu 1 309 -3 24 53 0 0 chr2 13770135 13770173 -239486410 + AT_rich Low_complexity Low_complexity 1 38 0 2206 81 3 17 chr2 13770705 13771003 -239485580 + AluY SINE Alu 1 294 -17 383 139 28 14 chr2 13771422 13771494 -239485089 - L1MB1 LINE L1 -1 6167 6095 777 133 0 21 chr2 13771494 13771637 -239484946 - L1MB1 LINE L1 -3 6165 6026 202 316 51 0 chr2 13772192 13772290 -239484293 - MIR SINE MIR -47 215 113 295 326 0 11 chr2 13772912 13773004 -239483579 - MLT1I LTR MaLR -305 104 14 956 300 58 40 chr2 13773294 13773848 -239482735 - L1ME LINE L1 -5380 690 127 297 231 42 106 chr2 13774339 13774647 -239481936 - MER110A LTR ERV1 -104 364 39 249 267 171 48 chr2 13777275 13777421 -239479162 + MIR SINE MIR 58 221 -41 1606 210 3 31 chr2 13777810 13778163 -239478420 + MER2 DNA MER2_type 2 344 0 385 244 8 34 chr2 13778635 13778754 -239477829 + MLT1K LTR MaLR 463 578 -10 2142 109 3 0 chr2 13778980 13779273 -239477310 + AluSx SINE Alu 1 294 -18 226 287 197 8 chr2 13779786 13779908 -239476675 - L2 LINE L2 -7 3306 3162 254 335 34 34 chr2 13781667 13781906 -239474677 + L1MEc LINE L1 692 930 -5466 7603 30 0 0 chr2 13781919 13783240 -239473343 + L1PA3 LINE L1 4875 6195 0 272 274 73 50 chr2 13783310 13783627 -239472956 + L1MEc LINE L1 952 1275 -4940 296 131 0 48 chr2 13783684 13783768 -239472815 + (TC)n Simple_repeat Simple_repeat 1 80 0 21 0 0 0 chr2 13785247 13785268 -239471315 + AT_rich Low_complexity Low_complexity 1 21 0 1159 269 180 27 chr2 13786102 13786652 -239469931 - MER76 LTR ERV -54 634 1 208 294 11 167 chr2 13787272 13787452 -239469131 - MIR SINE MIR -43 219 68 21 0 0 0 chr2 13787822 13787843 -239468740 + AT_rich Low_complexity Low_complexity 1 21 0 246 200 50 17 chr2 13788306 13788366 -239468217 + MIR SINE MIR 135 196 -66 3009 79 49 14 chr2 13788419 13788459 -239468124 - MLT2A1 LTR ERVL 0 444 407 252 59 0 0 chr2 13788459 13788493 -239468090 + (TA)n Simple_repeat Simple_repeat 2 35 0 3009 79 49 14 chr2 13788493 13788881 -239467702 - MLT2A1 LTR ERVL -37 407 1 228 352 134 32 chr2 13789452 13789796 -239466787 + L2 LINE L2 2444 2822 -492 2015 131 13 0 chr2 13790522 13790820 -239465763 + AluSx SINE Alu 6 307 -5 296 261 155 70 chr2 13793742 13793884 -239462699 + L2 LINE L2 3158 3311 -2 280 304 130 22 chr2 13793955 13794139 -239462444 + L2 LINE L2 1396 1599 -1715 241 306 82 53 chr2 13795027 13795197 -239461386 - MIR SINE MIR -18 244 70 1425 123 20 20 chr2 13795356 13795609 -239460974 - L1MA5A LINE L1 -2 6295 6043 26 93 0 0 chr2 13796016 13796091 -239460492 + AT_rich Low_complexity Low_complexity 1 75 0 2016 125 0 16 chr2 13796227 13796554 -239460029 + AluSx SINE Alu 1 322 0 264 207 46 23 chr2 13796732 13796819 -239459764 - L1MB7 LINE L1 -9 6175 6087 329 235 82 0 chr2 13797041 13797139 -239459444 - MIR SINE MIR -46 216 111 13763 179 37 24 chr2 13797185 13797328 -239459255 + L1MA3 LINE L1 18 158 -7566 5839 18 0 0 chr2 13797328 13798000 -239458583 + L1PA3 LINE L1 5481 6152 -3 13763 179 37 24 chr2 13798000 13805036 -239451547 + L1MA3 LINE L1 158 7724 0 677 316 179 12 chr2 13805198 13805701 -239450882 + L2 LINE L2 1777 2363 -951 195 162 0 0 chr2 13805893 13805930 -239450653 + CT-rich Low_complexity Low_complexity 2 38 0 238 281 74 66 chr2 13806205 13806326 -239450257 + L2 LINE L2 2362 2483 -831 1759 140 4 7 chr2 13806330 13806602 -239449981 - AluSx SINE Alu -6 306 36 2023 150 0 0 chr2 13806609 13806949 -239449634 - L1MA5 LINE L1 -2 6940 6601 742 182 0 27 chr2 13806949 13807097 -239449486 - L1MA5 LINE L1 -873 5915 5772 * 4377 227 55 30 chr2 13807096 13808517 -239448066 - L1MA5 LINE L1 -2488 4300 2844 2540 231 210 41 chr2 13808534 13809895 -239446688 - L1MA5 LINE L1 -3991 2798 1212 1683 304 55 25 chr2 13809985 13810619 -239445964 - L1MA5 LINE L1 -6132 657 5 251 374 103 33 chr2 13810678 13811363 -239445220 + L2 LINE L2 2554 3287 -26 9941 124 34 6 chr2 13811367 13811825 -239444758 + THE1C-int LTR MaLR 2 446 -1134 2011 133 3 0 chr2 13811825 13812119 -239444464 + AluSg SINE Alu 1 295 -15 9941 124 34 6 chr2 13812119 13813196 -239443387 + THE1C-int LTR MaLR 446 1580 0 1629 138 57 81 chr2 13813196 13813580 -239443003 + THE1C LTR MaLR 1 375 0 1113 205 12 101 chr2 13813977 13814313 -239442270 + MLT1E3 LTR MaLR 319 624 0 24 0 0 0 chr2 13814430 13814454 -239442129 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 13814908 13814929 -239441654 + AT_rich Low_complexity Low_complexity 1 21 0 351 78 0 0 chr2 13815477 13815528 -239441055 + (TG)n Simple_repeat Simple_repeat 1 51 0 273 296 0 0 chr2 13815705 13815786 -239440797 + MLT1A2 LTR MaLR 7 87 -287 * 352 148 0 0 chr2 13815784 13815838 -239440745 + MLT1A2 LTR MaLR 321 374 0 475 303 88 8 chr2 13816335 13816586 -239439997 - HAL1 LINE L1 -5 2502 2232 642 260 68 41 chr2 13816745 13816964 -239439619 - MIR SINE MIR -36 226 2 335 296 132 6 chr2 13816998 13817157 -239439426 - HAL1 LINE L1 -475 2032 1854 332 378 58 18 chr2 13817294 13817519 -239439064 - HAL1 LINE L1 -1594 913 680 587 271 28 11 chr2 13817651 13817828 -239438755 - MLT1A1 LTR MaLR 0 365 186 1548 256 59 18 chr2 13818010 13818635 -239437948 - L1M4 LINE L1 -1214 4932 4282 210 176 0 0 chr2 13818745 13818779 -239437804 + T-rich Low_complexity Low_complexity 1 34 0 376 198 22 44 chr2 13818779 13818961 -239437622 - L1M4 LINE L1 -2884 3262 3085 788 349 30 0 chr2 13819096 13819397 -239437186 - L2 LINE L2 -988 2326 2017 310 356 33 58 chr2 13819425 13819700 -239436883 + MLT1H1 LTR MaLR 31 298 -257 195 100 0 0 chr2 13819703 13819733 -239436850 + (TG)n Simple_repeat Simple_repeat 1 30 0 380 287 25 0 chr2 13819849 13819971 -239436612 - L1MEd LINE L1 -5993 126 2 251 289 70 9 chr2 13819982 13820096 -239436487 + MIR SINE MIR 87 207 -55 236 381 12 0 chr2 13821266 13821350 -239435233 - MIR SINE MIR -140 122 38 219 125 0 0 chr2 13821512 13821552 -239435031 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr2 13822259 13822288 -239434295 + AT_rich Low_complexity Low_complexity 1 29 0 431 83 0 0 chr2 13822882 13822942 -239433641 + L1PBa LINE L1 1276 1335 -5528 219 288 64 56 chr2 13823131 13823256 -239433327 + MIR SINE MIR 31 156 -106 332 304 177 41 chr2 13823280 13823698 -239432885 - MLT1H LTR MaLR -2 547 73 215 253 107 0 chr2 13824348 13824423 -239432160 + MIR SINE MIR 47 129 -133 1177 158 113 25 chr2 13824482 13824722 -239431861 + MSTA LTR MaLR 1 261 -167 3023 40 3 3 chr2 13824722 13825093 -239431490 + L1PA3 LINE L1 4104 4474 -1672 7534 31 39 1 chr2 13825193 13826836 -239429747 + L1PA3 LINE L1 4472 6152 -3 971 121 145 0 chr2 13826866 13827032 -239429551 + MSTA LTR MaLR 239 428 0 2490 284 24 25 chr2 13827432 13828257 -239428326 + L1MB7 LINE L1 54 877 -5665 2394 244 29 39 chr2 13828256 13829113 -239427470 + L1MB7 LINE L1 4640 5488 -1156 * 283 215 46 15 chr2 13829113 13829243 -239427340 + (TTAAA)n Simple_repeat Simple_repeat 1 134 0 3516 196 51 6 chr2 13829243 13830151 -239426432 + L1MB7 LINE L1 5724 6674 -8 324 339 9 0 chr2 13830654 13830766 -239425817 + L2 LINE L2 2167 2279 -1035 181 217 0 43 chr2 13831513 13831559 -239425024 + MIR SINE MIR 152 195 -67 28 71 0 0 chr2 13833413 13833469 -239423114 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 13833962 13833985 -239422598 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 13834555 13834580 -239422003 + AT_rich Low_complexity Low_complexity 1 25 0 666 111 0 10 chr2 13834595 13834694 -239421889 + MER4A LTR ERV1 1 98 -566 2341 114 2 96 chr2 13834694 13835140 -239421443 + MER4A LTR ERV1 261 664 0 248 325 88 31 chr2 13835311 13835471 -239421112 + MIR SINE MIR 13 181 -81 1771 174 18 0 chr2 13835481 13835814 -239420769 + L1MA4 LINE L1 5936 6274 -26 466 347 6 6 chr2 13836388 13836561 -239420022 - MER5B DNA MER1_type 0 178 6 2603 130 9 25 chr2 13836761 13837199 -239419384 + MER57B LTR ERV1 1 431 -3 4087 155 24 6 chr2 13837202 13837865 -239418718 + MER57B-int LTR ERV1 1 675 -6862 * 4164 174 49 15 chr2 13837859 13839212 -239417371 + MER57B-int LTR ERV1 288 1775 -4171 1114 101 10 8 chr2 13839199 13839372 -239417211 + MER57B-int LTR ERV1 1503 2017 -3929 * 254 91 68 0 chr2 13839348 13839392 -239417191 + MER57B-int LTR ERV1 2167 2213 -3733 * 14317 167 91 61 chr2 13839380 13841102 -239415481 + MER57B-int LTR ERV1 3336 5005 -2532 2189 90 0 13 chr2 13841102 13841403 -239415180 + AluSg SINE Alu 14 310 0 14317 167 91 61 chr2 13841403 13843386 -239413197 + MER57B-int LTR ERV1 5005 7151 -386 706 118 31 31 chr2 13843386 13843513 -239413070 + LTR54B LTR ERV1 5 131 -367 1436 121 121 0 chr2 13843513 13843744 -239412839 + MER57B-int LTR ERV1 7279 7537 0 2756 105 16 23 chr2 13843744 13844181 -239412402 + MER57B LTR ERV1 1 434 0 32 43 0 0 chr2 13844330 13844376 -239412207 + AT_rich Low_complexity Low_complexity 1 46 0 777 212 6 24 chr2 13844380 13844550 -239412033 + AluJo SINE Alu 5 171 -141 379 326 98 19 chr2 13844615 13845065 -239411518 - MLT2E LTR ERVL -74 554 42 433 280 83 38 chr2 13845142 13846095 -239410488 + L1ME3A LINE L1 5072 6090 -80 1933 49 23 102 chr2 13846185 13846515 -239410068 + AluY SINE Alu 1 306 0 244 307 88 18 chr2 13846740 13846854 -239409729 + L2 LINE L2 3015 3136 -177 775 257 5 0 chr2 13846874 13847061 -239409522 + Tigger6a DNA MER2_type 2 189 -894 * 2226 213 46 28 chr2 13847054 13847636 -239408947 + Tigger6a DNA MER2_type 425 1017 -66 985 331 110 49 chr2 13847826 13848606 -239407977 - L2 LINE L2 -431 2883 2031 5004 24 0 3 chr2 13848606 13849194 -239407389 + L1PA3 LINE L1 5570 6155 0 985 331 110 49 chr2 13849194 13849387 -239407196 - L2 LINE L2 -1283 2031 1851 330 224 8 24 chr2 13849395 13849520 -239407063 - L1MEc LINE L1 -4130 2266 2144 1801 203 129 27 chr2 13849521 13850039 -239406544 - L1MC3 LINE L1 -16 7769 7199 1243 254 40 55 chr2 13850027 13850574 -239406009 - L1M4 LINE L1 -1143 5003 4465 * 383 83 97 42 chr2 13850865 13850937 -239405646 + L1PB4 LINE L1 6074 6149 -7 22 0 0 0 chr2 13851155 13851177 -239405406 + AT_rich Low_complexity Low_complexity 1 22 0 193 300 60 40 chr2 13851318 13851418 -239405165 + MIR SINE MIR 10 111 -151 1743 261 63 54 chr2 13851802 13852237 -239404346 - L1ME1 LINE L1 -2 6164 5718 252 0 0 0 chr2 13852237 13852265 -239404318 + (TG)n Simple_repeat Simple_repeat 2 29 0 1743 261 63 54 chr2 13852265 13852591 -239403992 - L1ME1 LINE L1 -448 5718 5396 501 283 94 5 chr2 13852697 13852920 -239403663 - L1ME1 LINE L1 -748 5398 5156 687 206 70 45 chr2 13852925 13852987 -239403596 - L1ME1 LINE L1 -1435 4711 4652 1211 254 56 58 chr2 13852987 13853491 -239403092 - MLT1D LTR MaLR -2 503 1 687 206 70 45 chr2 13853491 13853714 -239402869 - L1ME1 LINE L1 -1494 4652 4419 215 260 0 41 chr2 13854110 13854183 -239402400 + CT-rich Low_complexity Low_complexity 4 73 0 22 99 0 0 chr2 13855803 13855874 -239400709 + AT_rich Low_complexity Low_complexity 1 71 0 21 36 0 0 chr2 13855982 13856010 -239400573 + AT_rich Low_complexity Low_complexity 1 28 0 203 375 23 16 chr2 13857620 13857748 -239398835 - L3 LINE CR1 -105 1472 1344 2378 58 0 55 chr2 13858076 13858401 -239398182 - AluY SINE Alu -4 307 1 21 0 0 0 chr2 13860107 13860128 -239396455 + AT_rich Low_complexity Low_complexity 1 21 0 203 311 9 9 chr2 13860159 13860265 -239396318 + (TA)n Simple_repeat Simple_repeat 2 107 0 234 211 0 0 chr2 13860265 13860317 -239396266 - L1MC4 LINE L1 -1339 6703 6652 193 355 27 0 chr2 13860384 13860494 -239396089 - MIR SINE MIR -110 152 40 4200 187 38 68 chr2 13861107 13861461 -239395122 - L1 LINE L1 -1055 5091 4728 7431 35 0 0 chr2 13861461 13862561 -239394022 - L1PA3 LINE L1 0 6155 5093 4200 187 38 68 chr2 13862561 13862857 -239393726 - L1 LINE L1 -1418 4728 4425 1882 156 7 3 chr2 13862857 13863164 -239393419 - AluSx SINE Alu 0 312 5 4200 187 38 68 chr2 13863164 13863643 -239392940 - L1 LINE L1 -1721 4425 3995 545 144 10 0 chr2 13863771 13863875 -239392708 + (CA)n Simple_repeat Simple_repeat 1 105 0 224 363 118 15 chr2 13864179 13864314 -239392269 + L2 LINE L2 3165 3313 0 29 0 0 0 chr2 13864460 13864489 -239392094 + AT_rich Low_complexity Low_complexity 1 29 0 217 281 31 0 chr2 13865097 13865161 -239391422 + MIR SINE MIR 76 141 -121 396 0 0 0 chr2 13865212 13865256 -239391327 + (CA)n Simple_repeat Simple_repeat 2 45 0 1657 195 10 0 chr2 13865269 13865576 -239391007 + AluJb SINE Alu 1 310 -2 6657 18 0 0 chr2 13866486 13867250 -239389333 - L1PA4 LINE L1 -8 6147 5384 5692 29 0 1 chr2 13867248 13867940 -239388643 + L1PA4 LINE L1 4704 5394 -752 * 240 315 0 22 chr2 13868339 13868431 -239388152 + GA-rich Low_complexity Low_complexity 3 92 0 2183 142 6 6 chr2 13869201 13869561 -239387022 + MER46B DNA MER2_type 2 236 0 226 264 73 36 chr2 13870210 13870320 -239386263 - MER103 DNA DNA -10 156 43 1606 199 3 7 chr2 13870328 13870620 -239385963 - AluJo SINE Alu -18 294 4 22 0 0 0 chr2 13871392 13871414 -239385169 + AT_rich Low_complexity Low_complexity 1 22 0 235 266 81 73 chr2 13872097 13872221 -239384362 - MIR SINE MIR -64 144 20 227 225 0 38 chr2 13872255 13872335 -239384248 + CT-rich Low_complexity Low_complexity 2 78 0 4256 160 16 27 chr2 13872362 13872692 -239383891 + L1PB4 LINE L1 5363 5695 -461 2115 110 3 0 chr2 13872692 13872992 -239383591 + AluSg SINE Alu 1 301 -9 4256 160 16 27 chr2 13872992 13873463 -239383120 + L1PB4 LINE L1 5695 6155 -1 2125 116 0 0 chr2 13873471 13873763 -239382820 + AluSx SINE Alu 1 292 -20 1316 273 113 20 chr2 13873780 13874601 -239381982 - L1MEc LINE L1 -3131 3084 2148 198 0 0 0 chr2 13874601 13874623 -239381960 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1316 273 113 20 chr2 13874623 13874940 -239381643 - L1MEc LINE L1 -4067 2148 1862 362 175 62 0 chr2 13874958 13875038 -239381545 - L1MB4 LINE L1 0 6180 6096 1068 153 0 0 chr2 13875153 13875339 -239381244 - AluSq SINE Alu 0 314 129 26 88 0 0 chr2 13875908 13875976 -239380607 + AT_rich Low_complexity Low_complexity 1 68 0 260 312 0 32 chr2 13876501 13876594 -239379989 + MIR3 SINE MIR 67 156 -52 6394 220 41 20 chr2 13876853 13879810 -239376773 - L1MA4 LINE L1 -6 7713 4658 1766 236 42 33 chr2 13879816 13880637 -239375946 - L1MA4 LINE L1 -3726 3839 3015 842 265 58 22 chr2 13880621 13881032 -239375551 - L1MEc LINE L1 -2786 3429 3004 * 4064 198 20 70 chr2 13881047 13881964 -239374619 + L1MA9 LINE L1 4874 5690 -622 336 24 0 0 chr2 13881964 13882005 -239374578 + (CA)n Simple_repeat Simple_repeat 2 42 0 4064 198 20 70 chr2 13882005 13882599 -239373984 + L1MA9 LINE L1 5690 6312 0 34 0 0 0 chr2 13882603 13882637 -239373946 + AT_rich Low_complexity Low_complexity 1 34 0 789 307 83 30 chr2 13882641 13883343 -239373240 - L1MEc LINE L1 -4591 1805 1041 2274 105 0 0 chr2 13883343 13883648 -239372935 - AluSx SINE Alu -7 305 1 789 307 83 30 chr2 13883648 13883867 -239372716 - L1MEc LINE L1 -5355 1041 835 386 367 52 39 chr2 13883955 13884413 -239372170 - L1MEc LINE L1 -5711 685 222 28 0 0 0 chr2 13884603 13884631 -239371952 + AT_rich Low_complexity Low_complexity 1 28 0 227 299 188 0 chr2 13885188 13885305 -239371278 + MIR SINE MIR 35 173 -89 2368 72 0 0 chr2 13886202 13886508 -239370075 - AluY SINE Alu -5 306 1 198 320 39 68 chr2 13887276 13887379 -239369204 + MIR3 SINE MIR 15 114 -94 2297 44 17 7 chr2 13887414 13887708 -239368875 + AluY SINE Alu 1 297 -14 239 305 145 15 chr2 13888018 13888149 -239368434 - L2 LINE L2 -8 3305 3158 332 319 0 0 chr2 13888158 13888249 -239368334 + L1MC4 LINE L1 6613 6703 -1339 * 359 289 0 0 chr2 13888169 13888259 -239368324 - L1MC4 LINE L1 -1339 6703 6614 696 269 152 63 chr2 13888277 13888431 -239368152 - L2 LINE L2 -134 3179 3040 1819 112 29 4 chr2 13888431 13888707 -239367876 - AluSx SINE Alu -17 295 13 696 269 152 63 chr2 13888707 13889110 -239367473 - L2 LINE L2 -273 3040 2608 422 319 70 14 chr2 13890234 13890447 -239366136 - MLT1G LTR MaLR -12 578 354 359 297 17 80 chr2 13890725 13890900 -239365683 - L2 LINE L2 -4 3309 3146 744 337 239 22 chr2 13891019 13892157 -239364426 - L2 LINE L2 -339 2975 1591 2163 102 6 6 chr2 13892354 13892667 -239363916 + AluSp SINE Alu 1 313 0 438 126 133 106 chr2 13893026 13893177 -239363406 - L1MA4 LINE L1 0 6300 6146 24 0 0 70 chr2 13893804 13893847 -239362736 + AT_rich Low_complexity Low_complexity 1 40 0 21 36 0 0 chr2 13893876 13893904 -239362679 + AT_rich Low_complexity Low_complexity 1 28 0 229 307 0 0 chr2 13893917 13894005 -239362578 - L1M4 LINE L1 -1439 4707 4620 654 285 35 59 chr2 13894589 13894845 -239361738 + MIR SINE MIR 13 262 0 24 0 0 0 chr2 13896755 13896779 -239359804 + AT_rich Low_complexity Low_complexity 1 24 0 763 225 221 28 chr2 13896797 13896957 -239359626 + L1MC5 LINE L1 6693 6821 -1140 2005 110 7 21 chr2 13896957 13897248 -239359335 + AluSq SINE Alu 1 287 -26 763 225 221 28 chr2 13897248 13897545 -239359038 + L1MC5 LINE L1 6821 7238 -723 255 114 0 0 chr2 13900512 13900556 -239356027 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 410 181 0 0 chr2 13900815 13900898 -239355685 - AluJ/FRAM SINE Alu -9 303 221 1905 156 33 33 chr2 13902168 13902502 -239354081 - MER1B DNA MER1_type -5 334 1 388 284 24 8 chr2 13902752 13902879 -239353704 - HsTC2 DNA Tc2 0 1900 1772 442 284 27 7 chr2 13903044 13903192 -239353391 - HsTC2 DNA Tc2 -217 1681 1531 468 315 0 0 chr2 13903396 13903523 -239353060 - HsTC2 DNA Tc2 -1750 148 22 21 0 0 0 chr2 13903878 13903899 -239352684 + AT_rich Low_complexity Low_complexity 1 21 0 604 194 45 8 chr2 13904118 13904252 -239352331 - MIR SINE MIR 0 262 124 229 375 14 28 chr2 13904344 13904488 -239352095 + MIR SINE MIR 3 144 -118 3558 280 103 14 chr2 13904494 13904917 -239351666 + L1PB1 LINE L1 5 389 -5752 216 0 0 0 chr2 13904917 13904941 -239351642 + (GA)n Simple_repeat Simple_repeat 2 25 0 3558 280 103 14 chr2 13904941 13905772 -239350811 + L1PB1 LINE L1 389 1371 -4770 408 280 59 72 chr2 13905774 13905933 -239350650 + FAM SINE Alu 1 149 -26 344 254 0 9 chr2 13905947 13906057 -239350526 + L1PB1 LINE L1 1391 1499 -4642 2388 136 14 0 chr2 13906059 13906413 -239350170 - THE1B LTR MaLR 0 364 6 9438 120 66 12 chr2 13906418 13907917 -239348666 - THE1B-int LTR MaLR 0 1580 1 2336 127 25 6 chr2 13907919 13908274 -239348309 - THE1B LTR MaLR -2 362 1 492 230 62 82 chr2 13908296 13908477 -239348106 + L1PB1 LINE L1 1504 1670 -4519 * 5003 219 11 12 chr2 13908473 13909694 -239346889 - L1PB1 LINE L1 -1871 4339 3121 * 5278 171 22 32 chr2 13909690 13909945 -239346638 + L1PB1 LINE L1 4359 4615 -1600 1888 148 67 17 chr2 13909945 13910302 -239346281 + THE1C LTR MaLR 1 375 0 5278 171 22 32 chr2 13910302 13911924 -239344659 + L1PB1 LINE L1 4615 6215 0 1450 262 81 46 chr2 13911990 13912213 -239344370 + L1MA9 LINE L1 2690 2904 -4661 989 196 5 0 chr2 13912213 13912427 -239344156 + L1MA4 LINE L1 6077 6291 -9 1450 262 81 46 chr2 13912427 13913327 -239343256 + L1MA9 LINE L1 2904 3848 -3717 4644 62 13 0 chr2 13913334 13913932 -239342651 + L1PA7 LINE L1 5548 6153 -1 9456 210 38 57 chr2 13914322 13915710 -239340873 + L1MA9 LINE L1 3842 5256 -2475 272 235 0 0 chr2 13915710 13915761 -239340822 + MLT1A1 LTR MaLR 52 102 -263 9456 210 38 57 chr2 13915761 13917643 -239338940 + L1MA9 LINE L1 5256 7090 -641 2156 204 51 8 chr2 13917659 13917981 -239338602 + L1MA9 LINE L1 7195 7549 -182 240 35 0 0 chr2 13917981 13918010 -239338573 + (TA)n Simple_repeat Simple_repeat 2 30 0 2156 204 51 8 chr2 13918010 13918201 -239338382 + L1MA9 LINE L1 7549 7730 -1 283 246 59 51 chr2 13918383 13918501 -239338082 + MIR SINE MIR 33 151 -111 244 245 0 20 chr2 13920309 13920407 -239336176 + (TA)n Simple_repeat Simple_repeat 2 97 0 278 314 31 38 chr2 13920642 13920801 -239335782 + MIR SINE MIR 104 261 -1 21 0 0 0 chr2 13920806 13920827 -239335756 + AT_rich Low_complexity Low_complexity 1 21 0 506 205 76 15 chr2 13921222 13921358 -239335225 + L1ME1 LINE L1 5783 5906 -260 1525 228 0 3 chr2 13921371 13921678 -239334905 + MLT1A1 LTR MaLR 60 365 0 799 236 25 21 chr2 13921679 13921916 -239334667 + L1ME1 LINE L1 5913 6150 -16 334 235 12 148 chr2 13922332 13922494 -239334089 - MIR SINE MIR -103 159 20 738 301 125 21 chr2 13923020 13923356 -239333227 + MER45C DNA AcHobo 4 374 -579 374 237 13 0 chr2 13923499 13923575 -239333008 + MER45C DNA AcHobo 877 953 0 22 0 0 0 chr2 13924084 13924106 -239332477 + AT_rich Low_complexity Low_complexity 1 22 0 376 162 0 0 chr2 13924109 13924183 -239332400 - L1MA5 LINE L1 0 6300 6227 317 137 0 0 chr2 13924197 13924248 -239332335 + L1MA5 LINE L1 6035 6085 -215 719 290 35 5 chr2 13924298 13924498 -239332085 - MIR SINE MIR -37 225 20 4904 162 23 59 chr2 13924578 13925688 -239330895 - MER11C LTR ERVK 0 1071 1 1087 142 64 37 chr2 13925688 13925906 -239330677 + LTR51 LTR ERV1 8 231 -440 470 275 99 28 chr2 13925971 13926182 -239330401 - MIR SINE MIR -13 249 24 428 287 82 0 chr2 13926293 13926415 -239330168 - MER63 DNA MER1_type -78 758 1 630 101 0 0 chr2 13926611 13926720 -239329863 + (G)n Simple_repeat Simple_repeat 1 109 0 223 269 10 29 chr2 13926720 13926824 -239329759 + G-rich Low_complexity Low_complexity 1 102 0 1980 213 161 41 chr2 13927086 13927767 -239328816 - LTR1B LTR ERV1 -75 751 1 21 57 0 0 chr2 13928060 13928095 -239328488 + AT_rich Low_complexity Low_complexity 1 35 0 3043 68 3 3 chr2 13928155 13928537 -239328046 - MLT2A1 LTR ERVL -62 382 1 609 247 80 65 chr2 13928641 13928965 -239327618 + L1ME1 LINE L1 3794 4122 -2024 5806 32 0 1 chr2 13928965 13929651 -239326932 + L1PA3 LINE L1 5468 6152 -3 327 242 189 14 chr2 13929714 13929995 -239326588 + L1ME1 LINE L1 4114 4443 -1703 * 431 190 74 25 chr2 13929979 13930100 -239326483 + L1MA9 LINE L1 6161 6287 -25 * 478 260 40 77 chr2 13930098 13930323 -239326260 + L1ME1 LINE L1 4422 4633 -1513 1834 108 3 35 chr2 13930323 13930637 -239325946 + AluSx SINE Alu 4 307 -5 478 260 40 77 chr2 13930637 13930738 -239325845 + L1ME1 LINE L1 4633 4736 -1410 1250 284 38 30 chr2 13930766 13931586 -239324997 + L1ME1 LINE L1 5004 5843 -323 411 314 223 18 chr2 13931815 13932433 -239324150 - L2 LINE L2 -767 2547 1803 237 314 70 29 chr2 13933422 13933594 -239322989 - MIR SINE MIR -47 215 37 201 293 0 0 chr2 13933898 13933956 -239322627 + (TGAA)n Simple_repeat Simple_repeat 4 61 0 1555 139 0 0 chr2 13935056 13935286 -239321297 - AluSq SINE Alu -83 230 1 217 318 187 0 chr2 13935895 13936002 -239320581 + L2 LINE L2 2915 3041 -272 355 240 67 95 chr2 13936004 13936183 -239320400 - MLT1E2 LTR MaLR -238 267 91 310 189 32 63 chr2 13936194 13936289 -239320294 - L1MC4 LINE L1 -1339 6703 6612 296 18 0 70 chr2 13936289 13936346 -239320237 + (TA)n Simple_repeat Simple_repeat 2 54 0 349 194 0 122 chr2 13936364 13936462 -239320121 - MLT1E2 LTR MaLR -540 86 1 711 209 0 0 chr2 13936511 13936626 -239319957 - FLAM_A SINE Alu -18 115 1 191 146 24 0 chr2 13936654 13936695 -239319888 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 1060 233 124 18 chr2 13937281 13937676 -239318907 + L1ME LINE L1 323 759 -5311 601 221 0 27 chr2 13937747 13937896 -239318687 - L1 LINE L1 -1455 4691 4547 1521 246 72 17 chr2 13940236 13940655 -239315928 - MLT1F LTR MaLR -30 512 71 555 94 250 0 chr2 13940675 13940771 -239315812 - THE1B-int LTR MaLR -1460 120 1 2069 120 50 36 chr2 13940779 13941136 -239315447 - THE1B LTR MaLR 0 364 3 261 319 0 0 chr2 13941138 13941210 -239315373 - MLT1F LTR MaLR -467 75 4 5350 72 7 1 chr2 13941416 13942125 -239314458 + L1PA7 LINE L1 5424 6136 -18 3991 203 30 18 chr2 13944345 13945642 -239310941 - L1MB8 LINE L1 -6 6172 4858 36 62 0 0 chr2 13945802 13945866 -239310717 + AT_rich Low_complexity Low_complexity 1 64 0 501 188 30 0 chr2 13946374 13946475 -239310108 + MLT1J LTR MaLR 72 175 -336 213 39 0 0 chr2 13946584 13946610 -239309973 + (GA)n Simple_repeat Simple_repeat 1 26 0 485 222 40 16 chr2 13946610 13946736 -239309847 + L1MC4 LINE L1 7913 8041 -1 1764 288 83 19 chr2 13946840 13947036 -239309547 - L1MC4a LINE L1 -7 7801 7619 2077 109 0 50 chr2 13947036 13947357 -239309226 - AluSx SINE Alu -5 307 3 1764 288 83 19 chr2 13947357 13947963 -239308620 - L1MC4a LINE L1 -189 7619 6947 29 28 0 0 chr2 13949192 13949228 -239307355 + AT_rich Low_complexity Low_complexity 1 36 0 210 196 20 0 chr2 13949551 13949602 -239306981 + T-rich Low_complexity Low_complexity 3 54 0 1816 136 47 17 chr2 13949815 13950116 -239306467 + AluSx SINE Alu 3 312 0 22 0 0 0 chr2 13950234 13950256 -239306327 + AT_rich Low_complexity Low_complexity 1 22 0 257 346 165 16 chr2 13951381 13951624 -239304959 + L2 LINE L2 1168 1446 -1868 428 246 331 0 chr2 13951693 13951835 -239304748 - MER5A DNA MER1_type 0 189 1 452 346 61 65 chr2 13952019 13952836 -239303747 + L2 LINE L2 1758 2571 -743 751 316 101 72 chr2 13952951 13953662 -239302921 - L1MEd LINE L1 -4890 1229 493 2211 105 0 3 chr2 13953662 13953966 -239302617 + AluSg SINE Alu 1 303 -7 751 316 101 72 chr2 13953966 13954017 -239302566 - L1MEd LINE L1 -5626 493 445 260 357 0 0 chr2 13954085 13954169 -239302414 + L2 LINE L2 3227 3310 -3 454 66 13 13 chr2 13954745 13954821 -239301762 + (TA)n Simple_repeat Simple_repeat 1 76 0 800 263 216 11 chr2 13955188 13955549 -239301034 - LTR33A LTR ERVL 0 523 89 256 91 0 36 chr2 13956140 13956195 -239300388 + (TA)n Simple_repeat Simple_repeat 2 54 0 2079 162 25 133 chr2 13956321 13956950 -239299633 - L1MC3 LINE L1 0 7785 7225 515 238 0 0 chr2 13956953 13957075 -239299508 - L1MC3 LINE L1 -693 7092 6971 34 0 0 0 chr2 13957076 13957110 -239299473 + AT_rich Low_complexity Low_complexity 1 34 0 264 266 81 16 chr2 13957121 13957245 -239299338 - L1ME LINE L1 -435 5686 5555 212 291 158 9 chr2 13958363 13958473 -239298110 + MIR SINE MIR 30 154 -54 203 254 32 16 chr2 13960076 13960139 -239296444 + MIR SINE MIR 91 154 -108 186 87 65 0 chr2 13960509 13960555 -239296028 + (TA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr2 13961984 13962006 -239294577 + AT_rich Low_complexity Low_complexity 1 22 0 1622 123 54 19 chr2 13962144 13962405 -239294178 - AluSx SINE Alu -18 294 25 1305 284 38 30 chr2 13962564 13963384 -239293199 - L1ME1 LINE L1 -323 5777 4938 490 222 43 184 chr2 13963410 13963513 -239293070 - L1ME1 LINE L1 -1408 4672 4556 2110 115 0 3 chr2 13963513 13963818 -239292765 - AluSx SINE Alu -5 307 4 490 222 43 184 chr2 13963818 13964490 -239292093 - L1ME1 LINE L1 -1524 4556 4096 5813 32 0 0 chr2 13964490 13965175 -239291408 - L1PA3 LINE L1 -3 6152 5468 490 222 43 184 chr2 13965175 13965499 -239291084 - L1ME1 LINE L1 -1984 4096 3728 3021 68 3 3 chr2 13965603 13965985 -239290598 + MLT2A1 LTR ERVL 1 382 -62 1221 305 60 56 chr2 13965985 13967667 -239288916 - L1ME1 LINE L1 -4485 1776 57 900 256 98 14 chr2 13967717 13968064 -239288519 - L1M4 LINE L1 -1745 4401 4026 438 254 113 11 chr2 13968048 13968225 -239288358 - L1MEc LINE L1 -3696 2519 2325 * 1443 285 42 63 chr2 13968275 13969408 -239287175 - L1MEc LINE L1 -4842 1554 445 7383 164 18 11 chr2 13969432 13970064 -239286519 + HSMAR2 DNA Mariner 2 628 -674 1223 113 24 38 chr2 13970064 13970277 -239286306 - L1PA15 LINE L1 -3 6162 5953 7383 164 18 11 chr2 13970277 13970935 -239285648 + HSMAR2 DNA Mariner 628 1301 -1 869 176 11 27 chr2 13970979 13971167 -239285416 - L1MA7 LINE L1 -178 6113 5929 692 124 55 7 chr2 13971167 13971304 -239285279 + L1MA7 LINE L1 6132 6283 -8 1854 151 7 7 chr2 13972248 13972569 -239284014 + AluSx SINE Alu 2 312 0 207 167 0 0 chr2 13972800 13972836 -239283747 - MER5B DNA MER1_type -8 170 135 514 304 27 41 chr2 13973094 13973314 -239283269 + MIR SINE MIR 2 218 -44 2208 212 47 8 chr2 13973869 13974397 -239282186 + L1MB8 LINE L1 5624 6172 -6 347 298 48 0 chr2 13974629 13974753 -239281830 - MLT1G1 LTR MaLR 0 595 466 289 310 0 11 chr2 13975453 13975540 -239281043 + L2 LINE L2 3228 3313 0 321 15 75 15 chr2 13975637 13975704 -239280879 + (TA)n Simple_repeat Simple_repeat 2 72 0 803 244 157 37 chr2 13975755 13976132 -239280451 - MSTB LTR MaLR -4 422 1 183 156 0 0 chr2 13976822 13976854 -239279729 + (TATATG)n Simple_repeat Simple_repeat 6 37 0 4537 119 9 4 chr2 13976897 13977588 -239278995 + L1PA10 LINE L1 4730 6162 -1 4537 110 11 0 chr2 13977588 13978245 -239278338 + L1PA10 LINE L1 5504 6167 -1 593 264 53 94 chr2 13978247 13978702 -239277881 + L1MEc LINE L1 1533 1968 -4428 444 303 57 84 chr2 13978767 13979243 -239277340 + L1MEc LINE L1 1749 2211 -4185 267 217 0 0 chr2 13979252 13979312 -239277271 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1786 250 36 7 chr2 13979433 13979992 -239276591 + L1MB8 LINE L1 4477 5051 -1095 301 192 6 84 chr2 13980013 13980180 -239276403 + (TA)n Simple_repeat Simple_repeat 1 154 0 3191 216 44 22 chr2 13980230 13980822 -239275761 + L1MB8 LINE L1 5126 5753 -425 1559 183 3 7 chr2 13980822 13981155 -239275428 + AluJb SINE Alu 1 332 0 3191 216 44 22 chr2 13981155 13981556 -239275027 + L1MB8 LINE L1 5753 6144 -34 377 222 68 17 chr2 13981569 13981686 -239274897 + L1M4 LINE L1 5616 5738 -440 261 86 0 0 chr2 13981687 13981722 -239274861 + AluSp SINE Alu 136 170 -133 574 263 75 22 chr2 13981737 13982001 -239274582 - L1M4 LINE L1 -432 5742 5468 232 414 39 0 chr2 13982101 13982205 -239274378 - L2 LINE L2 -4 3268 3161 1123 219 19 4 chr2 13984042 13984307 -239272276 - L1MB8 LINE L1 -191 5987 5719 22 0 0 0 chr2 13984468 13984490 -239272093 + AT_rich Low_complexity Low_complexity 1 22 0 313 24 24 0 chr2 13985064 13985105 -239271478 + MADE1 DNA Mariner 2 43 -37 496 302 64 42 chr2 13985135 13985400 -239271183 + MLT1K LTR MaLR 306 576 -12 28 48 0 0 chr2 13985942 13985984 -239270599 + AT_rich Low_complexity Low_complexity 1 42 0 235 267 0 27 chr2 13986066 13986141 -239270442 + (TATG)n Simple_repeat Simple_repeat 4 76 0 465 231 41 0 chr2 13986173 13986294 -239270289 + L1ME1 LINE L1 6016 6141 -25 181 281 188 10 chr2 13986787 13986883 -239269700 + MIR SINE MIR 133 245 -17 * 269 286 0 44 chr2 13986881 13986972 -239269611 - MIR SINE MIR -115 147 61 1954 132 0 0 chr2 13987362 13987680 -239268903 + AluSg SINE Alu 3 320 0 181 196 36 0 chr2 13987758 13987814 -239268769 + CT-rich Low_complexity Low_complexity 4 61 0 214 215 31 54 chr2 13988280 13988410 -239268173 + (TAAA)n Simple_repeat Simple_repeat 2 128 0 25 65 0 0 chr2 13988452 13988498 -239268085 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr2 13989395 13989430 -239267153 + AT_rich Low_complexity Low_complexity 1 35 0 30 0 0 0 chr2 13989505 13989535 -239267048 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr2 13989554 13989576 -239267007 + AT_rich Low_complexity Low_complexity 1 22 0 1435 179 195 8 chr2 13990111 13990490 -239266093 + LTR47A LTR ERVL 1 450 -2 991 140 7 0 chr2 13990828 13990971 -239265612 + AluSq SINE Alu 145 288 -25 584 273 82 62 chr2 13991537 13991793 -239264790 - MIR SINE MIR 0 262 2 2467 66 0 0 chr2 13991932 13992237 -239264346 - AluY SINE Alu -6 305 1 474 270 112 18 chr2 13992439 13992635 -239263948 + MLT1H1 LTR MaLR 32 213 -329 318 289 44 14 chr2 13992946 13993215 -239263368 - L1MCa LINE L1 -4938 1669 1194 426 264 26 80 chr2 13993601 13993912 -239262671 - HAL1b LINE L1 -45 1303 1010 22 35 0 0 chr2 13993933 13993962 -239262621 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 13994115 13994136 -239262447 + AT_rich Low_complexity Low_complexity 1 21 0 1822 110 0 0 chr2 13994193 13994448 -239262135 - AluSx SINE Alu 0 312 58 225 0 0 0 chr2 13994482 13994507 -239262076 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 181 244 0 0 chr2 13994974 13995015 -239261568 - L2 LINE L2 -9 3304 3264 275 140 34 39 chr2 13996869 13997048 -239259535 + (TA)n Simple_repeat Simple_repeat 2 179 0 243 184 29 39 chr2 13997061 13997164 -239259419 + (TA)n Simple_repeat Simple_repeat 2 103 0 472 212 29 29 chr2 13997431 13997568 -239259015 + L1M4b LINE L1 1353 1489 -5370 398 228 133 128 chr2 13997611 13997996 -239258587 - MLT2B1 LTR ERVL 0 520 135 227 207 43 129 chr2 13998127 13998267 -239258316 + L2 LINE L2 3088 3215 -98 1343 174 0 5 chr2 13998298 13998522 -239258061 - AluJb SINE Alu -5 307 85 260 369 0 0 chr2 13998526 13998610 -239257973 + L2 LINE L2 3189 3272 0 285 75 0 0 chr2 13999099 13999139 -239257444 + (TG)n Simple_repeat Simple_repeat 1 40 0 254 372 32 0 chr2 14000548 14000642 -239255941 - MIR SINE MIR -145 117 21 229 333 155 0 chr2 14001293 14001422 -239255161 + MIR3 SINE MIR 43 191 -17 713 272 5 0 chr2 14001471 14001673 -239254910 + MER3 DNA MER1_type 2 204 -5 229 316 158 11 chr2 14001784 14001879 -239254704 + MIR3 SINE MIR 9 117 -91 553 306 70 8 chr2 14001918 14002160 -239254423 + L1M4 LINE L1 9 265 -6277 15060 143 16 101 chr2 14002366 14005767 -239250816 + L1PA7 LINE L1 12 3122 -3024 11894 90 5 0 chr2 14005767 14005832 -239250751 + L1PA7 LINE L1 3606 3669 -2485 354 23 0 0 chr2 14005832 14005875 -239250708 + (CA)n Simple_repeat Simple_repeat 2 44 0 11894 90 5 0 chr2 14005875 14008292 -239248291 + L1PA7 LINE L1 3669 6151 -3 24 0 0 0 chr2 14008292 14008316 -239248267 + AT_rich Low_complexity Low_complexity 1 24 0 1125 274 3 8 chr2 14008418 14008791 -239247792 + L1M4 LINE L1 2635 3005 -3639 * 1748 203 104 10 chr2 14008787 14009295 -239247288 + L1M4 LINE L1 829 1384 -5158 1158 137 16 143 chr2 14009307 14009622 -239246961 + L1MA9 LINE L1 6038 6312 0 1684 246 40 71 chr2 14009666 14010242 -239246341 + L1M4 LINE L1 2539 3131 -3513 183 80 0 0 chr2 14010242 14010267 -239246316 + (TG)n Simple_repeat Simple_repeat 2 26 0 1684 246 40 71 chr2 14010267 14010732 -239245851 + L1M4 LINE L1 3131 3545 -3099 2203 106 0 10 chr2 14010732 14011035 -239245548 - AluSc SINE Alu -5 304 5 1684 246 40 71 chr2 14011035 14011077 -239245506 + L1M4 LINE L1 3545 3587 -3057 468 387 11 7 chr2 14011077 14011338 -239245245 - L2 LINE L2 -301 3012 2753 2051 207 20 4 chr2 14011830 14012323 -239244260 - L1 LINE L1 -2205 3941 3441 * 2413 220 7 19 chr2 14012313 14012853 -239243730 + L1MA9 LINE L1 5630 6163 -149 862 239 37 0 chr2 14012861 14013049 -239243534 + AluJo SINE Alu 95 289 -23 622 205 35 19 chr2 14013053 14013368 -239243215 + GA-rich Low_complexity Low_complexity 1 320 0 311 250 0 0 chr2 14013387 14013463 -239243120 + L1MA10 LINE L1 6183 6258 -76 481 291 7 27 chr2 14014023 14014171 -239242412 + MIR SINE MIR 7 151 -111 25 51 0 0 chr2 14014196 14014235 -239242348 + AT_rich Low_complexity Low_complexity 1 39 0 2200 81 0 3 chr2 14014536 14014856 -239241727 - AluY SINE Alu 0 319 1 23 0 0 0 chr2 14015588 14015611 -239240972 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr2 14015954 14015978 -239240605 + AT_rich Low_complexity Low_complexity 1 24 0 236 317 18 72 chr2 14016990 14017157 -239239426 + MIR SINE MIR 82 239 -23 2243 93 0 22 chr2 14017173 14017486 -239239097 - AluSc SINE Alu -3 306 1 237 211 141 0 chr2 14017827 14017898 -239238685 + L1P1 LINE L1 5617 5697 -458 310 293 47 13 chr2 14018013 14018241 -239238342 + L1MC4a LINE L1 5712 5950 -171 22 0 0 0 chr2 14019022 14019044 -239237539 + AT_rich Low_complexity Low_complexity 1 22 0 221 301 14 0 chr2 14019180 14019253 -239237330 + MIR SINE MIR 189 262 0 6047 78 1 2 chr2 14019753 14020546 -239236037 + L1P LINE L1 3 794 -5352 43267 41 4 3 chr2 14020707 14026848 -239229735 + L1PA4 LINE L1 8 6152 -3 24 53 0 0 chr2 14027793 14027831 -239228752 + AT_rich Low_complexity Low_complexity 1 38 0 205 293 20 61 chr2 14028192 14028291 -239228292 - MIR3 SINE MIR -21 187 93 487 229 62 22 chr2 14028442 14028621 -239227962 - L1MD3 LINE L1 -1 7994 7809 1065 211 21 0 chr2 14028623 14028865 -239227718 + L1MB5 LINE L1 5928 6174 0 262 355 70 40 chr2 14028887 14029259 -239227324 - L2 LINE L2 -688 2626 2244 1831 167 128 13 chr2 14029551 14029935 -239226648 + MSTA LTR MaLR 1 428 0 233 261 63 54 chr2 14030406 14030517 -239226066 + L1ME LINE L1 4532 4643 -1503 373 296 101 77 chr2 14030734 14031027 -239225556 + L1ME LINE L1 4782 5094 -1052 2224 105 0 16 chr2 14031027 14031342 -239225241 - AluSq SINE Alu -3 310 1 373 296 101 77 chr2 14031342 14031554 -239225029 + L1ME LINE L1 5094 5299 -847 262 289 63 19 chr2 14031614 14031773 -239224810 + L1ME LINE L1 5621 5786 -335 24 53 0 0 chr2 14031790 14031828 -239224755 + AT_rich Low_complexity Low_complexity 1 38 0 266 356 0 0 chr2 14031947 14032093 -239224490 + (TA)n Simple_repeat Simple_repeat 1 146 0 368 296 106 53 chr2 14032509 14032716 -239223867 + L1M4 LINE L1 3635 3860 -2286 2351 83 0 0 chr2 14032716 14033018 -239223565 + AluY SINE Alu 1 302 -9 368 296 106 53 chr2 14033018 14033074 -239223509 + L1M4 LINE L1 3860 3912 -2234 343 311 22 11 chr2 14033655 14033835 -239222748 + L1MEd LINE L1 903 1084 -5035 26 0 0 0 chr2 14034126 14034152 -239222431 + AT_rich Low_complexity Low_complexity 1 26 0 272 315 28 6 chr2 14035459 14035640 -239220943 + L1M4 LINE L1 3759 3943 -2203 393 333 51 46 chr2 14036605 14036842 -239219741 + L3 LINE CR1 609 846 -731 2625 33 0 0 chr2 14037314 14037617 -239218966 - AluY SINE Alu -8 303 1 1162 37 0 0 chr2 14037618 14037752 -239218831 - AluY SINE Alu -177 134 1 22 0 0 0 chr2 14038830 14038852 -239217731 + AT_rich Low_complexity Low_complexity 1 22 0 294 357 29 19 chr2 14038865 14039075 -239217508 + MIR SINE MIR 35 246 -16 22 0 0 0 chr2 14039298 14039320 -239217263 + AT_rich Low_complexity Low_complexity 1 22 0 349 165 23 65 chr2 14039759 14039888 -239216695 - MER2 DNA MER2_type -136 209 22 1077 277 39 10 chr2 14040018 14040325 -239216258 + LTR53 LTR ERVL 194 509 -10 196 268 85 49 chr2 14041235 14041317 -239215266 - L2 LINE L2 -2 3311 3227 243 0 0 0 chr2 14042668 14042695 -239213888 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 2169 130 0 0 chr2 14043249 14043556 -239213027 - AluSc SINE Alu -2 307 1 452 283 22 60 chr2 14044241 14044425 -239212158 + MER8 DNA MER2_type 1 177 -62 383 162 14 27 chr2 14044458 14044532 -239212051 - Tigger2 DNA MER2_type -2645 73 1 319 136 2 2 chr2 14044570 14044621 -239211962 + Alu SINE Alu 2 46 -255 1484 205 10 13 chr2 14044831 14045133 -239211450 - AluJb SINE Alu -11 301 1 186 366 14 0 chr2 14045406 14045477 -239211106 + MIR SINE MIR 64 135 -127 206 301 221 28 chr2 14046185 14046398 -239210185 - MIR SINE MIR -6 256 3 261 305 53 33 chr2 14046461 14046612 -239209971 + MIR SINE MIR 109 262 0 207 300 90 10 chr2 14047986 14048086 -239208497 + MIR SINE MIR 91 198 -64 26 30 0 0 chr2 14048086 14048119 -239208464 + AT_rich Low_complexity Low_complexity 1 33 0 414 131 51 51 chr2 14048234 14048554 -239208029 + (TTAAA)n Simple_repeat Simple_repeat 1 320 0 347 187 66 18 chr2 14048485 14048651 -239207932 + (TTTAA)n Simple_repeat Simple_repeat 1 174 0 * 1493 220 26 12 chr2 14048715 14049056 -239207527 + MLT1A1 LTR MaLR 4 349 -16 1528 141 146 68 chr2 14049056 14049453 -239207130 - MSTA LTR MaLR 0 428 1 2001 167 55 40 chr2 14049546 14049966 -239206617 - MSTB LTR MaLR 0 426 1 216 359 34 8 chr2 14052604 14052721 -239203862 + MIR3 SINE MIR 5 124 -84 234 317 85 55 chr2 14053179 14053343 -239203240 + MIR SINE MIR 87 255 -7 30 0 0 0 chr2 14053478 14053508 -239203075 + AT_rich Low_complexity Low_complexity 1 30 0 780 195 0 16 chr2 14053744 14053929 -239202654 + L1MA7 LINE L1 6109 6290 -1 1319 213 111 39 chr2 14054462 14054823 -239201760 + MLT1B LTR MaLR 4 390 0 2269 114 42 28 chr2 14054879 14055238 -239201345 - THE1B LTR MaLR 0 364 1 650 219 11 3 chr2 14055975 14056318 -239200265 + GA-rich Low_complexity Low_complexity 1 346 0 309 232 28 46 chr2 14056436 14056544 -239200039 - MLT1H1 LTR MaLR -2 540 448 268 277 10 29 chr2 14056726 14056829 -239199754 - MLT1I LTR MaLR -260 175 70 2078 181 7 20 chr2 14057207 14057611 -239198972 + Tigger1 DNA MER2_type 1 399 -2019 21 0 0 0 chr2 14058716 14058737 -239197846 + AT_rich Low_complexity Low_complexity 1 21 0 214 279 68 104 chr2 14059238 14059277 -239197306 - MIR SINE MIR -51 157 118 6405 25 1 0 chr2 14059277 14060029 -239196554 + L1PA3 LINE L1 5401 6153 -2 214 279 68 104 chr2 14060029 14060168 -239196415 - MIR SINE MIR -90 118 16 256 224 24 71 chr2 14060439 14060499 -239196084 - MIR SINE MIR -3 259 203 1258 232 54 77 chr2 14060499 14061016 -239195567 + MLT1D LTR MaLR 1 505 0 256 224 24 71 chr2 14061016 14061040 -239195543 - MIR SINE MIR -59 203 179 221 274 0 16 chr2 14061040 14061102 -239195481 - MIR SINE MIR -198 64 4 261 328 50 8 chr2 14061792 14061911 -239194672 + L1ME4a LINE L1 5483 5606 -515 307 264 129 31 chr2 14062497 14062660 -239193923 + L1ME4a LINE L1 5927 6105 -16 2255 131 37 0 chr2 14064233 14064584 -239191999 + THE1B LTR MaLR 1 364 0 196 333 36 36 chr2 14064620 14064758 -239191825 + MIR SINE MIR 20 157 -105 2424 153 11 52 chr2 14064964 14065422 -239191161 - Tigger2 DNA MER2_type 0 2718 2280 388 203 0 0 chr2 14065420 14065489 -239191094 - Tigger2 DNA MER2_type -2649 69 1 * 471 251 82 55 chr2 14065536 14065791 -239190792 - L1MC4 LINE L1 -32 8010 7749 24 32 0 0 chr2 14065850 14065881 -239190702 + AT_rich Low_complexity Low_complexity 1 31 0 336 326 88 18 chr2 14065891 14066118 -239190465 - L1MC4 LINE L1 -462 7580 7338 762 97 0 18 chr2 14066120 14066234 -239190349 + FRAM SINE Alu 60 171 -5 338 278 166 22 chr2 14067128 14067351 -239189232 + L2 LINE L2 2108 2362 -952 297 377 45 0 chr2 14070981 14071135 -239185448 - MIR3 SINE MIR -3 205 45 242 328 98 25 chr2 14071437 14071559 -239185024 + MIR SINE MIR 17 147 -61 209 306 157 0 chr2 14071579 14071700 -239184883 - MIR SINE MIR 0 262 123 760 293 45 4 chr2 14071723 14071969 -239184614 + MIR SINE MIR 2 257 -5 778 257 71 7 chr2 14072303 14072583 -239184000 + L1MC4 LINE L1 7381 7678 -364 1826 155 0 20 chr2 14072838 14073134 -239183449 + AluSx SINE Alu 1 290 -22 1791 231 20 39 chr2 14073248 14073759 -239182824 - MLT1D LTR MaLR -4 501 1 226 327 36 45 chr2 14073970 14074020 -239182563 + L2 LINE L2 3157 3206 -66 1534 238 79 25 chr2 14074020 14074499 -239182084 + MLT1D LTR MaLR 1 505 0 226 327 36 45 chr2 14074499 14074558 -239182025 + L2 LINE L2 3206 3265 -7 256 250 0 0 chr2 14074560 14074612 -239181971 + GA-rich Low_complexity Low_complexity 4 55 0 1109 165 6 0 chr2 14076271 14076453 -239180130 + Tigger1 DNA MER2_type 2236 2418 0 2193 61 27 24 chr2 14077268 14077565 -239179018 + AluY SINE Alu 1 298 -13 256 272 12 12 chr2 14078643 14078724 -239177859 + (TATATG)n Simple_repeat Simple_repeat 3 83 0 317 266 85 32 chr2 14078804 14078898 -239177685 + L2 LINE L2 3199 3297 -16 1326 254 87 33 chr2 14079067 14079790 -239176793 + L1M4 LINE L1 2402 3163 -2983 950 202 21 0 chr2 14079811 14079999 -239176584 + MLT1C LTR MaLR 276 467 0 314 296 0 0 chr2 14081377 14081475 -239175108 - MLT1-int LTR MaLR -1268 103 6 23 0 0 0 chr2 14081935 14081958 -239174625 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr2 14082273 14082299 -239174284 + AT_rich Low_complexity Low_complexity 1 26 0 297 0 0 0 chr2 14082355 14082388 -239174195 + (CA)n Simple_repeat Simple_repeat 2 34 0 2505 254 63 6 chr2 14082495 14083132 -239173451 + ERVL LTR ERVL 52 724 -5040 272 284 12 0 chr2 14083141 14083222 -239173361 - MLT1E LTR MaLR -452 141 60 6174 203 20 19 chr2 14083222 14084623 -239171960 - L1P LINE L1 -1679 4467 3065 777 215 50 20 chr2 14084659 14084859 -239171724 - MER3 DNA MER1_type 0 209 4 254 202 281 0 chr2 14085575 14085664 -239170919 + MIR SINE MIR 3 116 -146 2371 78 3 10 chr2 14085677 14085986 -239170597 + AluY SINE Alu 1 307 -4 237 254 0 0 chr2 14086106 14086165 -239170418 + (TTA)n Simple_repeat Simple_repeat 2 60 0 665 320 71 43 chr2 14086593 14086987 -239169596 + MLT1J LTR MaLR 1 405 -106 25 31 0 0 chr2 14087456 14087488 -239169095 + AT_rich Low_complexity Low_complexity 1 32 0 201 290 29 0 chr2 14087562 14087631 -239168952 + (TG)n Simple_repeat Simple_repeat 2 72 0 1129 224 76 7 chr2 14087652 14087955 -239168628 - MER2 DNA MER2_type -1 344 21 350 239 74 103 chr2 14088020 14088263 -239168320 - MER106B DNA MER1_type 0 1059 1 21 36 0 0 chr2 14088781 14088809 -239167774 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 14089180 14089208 -239167375 + AT_rich Low_complexity Low_complexity 1 28 0 291 343 17 35 chr2 14089341 14089513 -239167070 - MIR SINE MIR -74 188 20 284 347 62 34 chr2 14089667 14089843 -239166740 - MIR3 SINE MIR -9 199 19 1463 35 0 0 chr2 14090000 14090174 -239166409 + L1PA3 LINE L1 5978 6151 -4 1595 148 9 99 chr2 14090723 14091067 -239165516 + AluSp SINE Alu 1 313 0 23 68 0 0 chr2 14091068 14091112 -239165471 + AT_rich Low_complexity Low_complexity 1 44 0 1811 144 14 0 chr2 14091662 14091939 -239164644 - AluSp SINE Alu -30 283 3 985 194 0 30 chr2 14091949 14092150 -239164433 + MER3 DNA MER1_type 14 208 -1 365 318 5 78 chr2 14092461 14092653 -239163930 - MIR3 SINE MIR -1 207 30 204 67 0 0 chr2 14093871 14093901 -239162682 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 259 183 0 50 chr2 14094885 14094945 -239161638 - MLT2D LTR ERVL -2 518 462 335 169 14 0 chr2 14094968 14095039 -239161544 + GA-rich Low_complexity Low_complexity 1 72 0 1495 225 25 3 chr2 14095043 14095358 -239161225 - MLT2D LTR ERVL -89 325 4 323 350 62 46 chr2 14096000 14096240 -239160343 - L2 LINE L2 -830 2484 2241 520 293 27 0 chr2 14096745 14096892 -239159691 - MIR SINE MIR -46 216 66 21 36 0 0 chr2 14097177 14097205 -239159378 + AT_rich Low_complexity Low_complexity 1 28 0 9684 52 2 2 chr2 14098334 14099576 -239157007 - L1P LINE L1 -1079 5067 3825 7192 50 3 2 chr2 14099576 14100564 -239156019 + L1PA5 LINE L1 5166 6154 0 31 0 0 0 chr2 14100599 14100630 -239155953 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 14100639 14100663 -239155920 + AT_rich Low_complexity Low_complexity 1 24 0 1036 228 65 45 chr2 14100792 14101148 -239155435 - MLT1A1 LTR MaLR 0 365 3 216 360 171 17 chr2 14101241 14101416 -239155167 - L3 LINE CR1 -69 1508 1307 21 0 0 0 chr2 14101535 14101556 -239155027 + AT_rich Low_complexity Low_complexity 1 21 0 1224 276 123 31 chr2 14102016 14102650 -239153933 + L1M4 LINE L1 1106 1797 -4587 2121 135 36 14 chr2 14102754 14103110 -239153473 - THE1B LTR MaLR 0 364 1 3606 124 83 26 chr2 14103572 14104232 -239152351 - L1PA16 LINE L1 0 6166 5469 385 286 20 27 chr2 14106465 14106612 -239149971 - MIR SINE MIR -25 237 92 259 311 82 37 chr2 14106987 14107122 -239149461 + MIR SINE MIR 53 193 -69 457 355 70 4 chr2 14108251 14108493 -239148090 + MIR SINE MIR 2 259 -3 242 274 78 17 chr2 14108721 14108900 -239147683 - L1M4 LINE L1 -3568 2578 2389 541 277 10 20 chr2 14108933 14109135 -239147448 + L1M4 LINE L1 2961 3160 -3222 * 1003 279 132 25 chr2 14109129 14109711 -239146872 + L1M4 LINE L1 4549 5190 -1192 185 386 10 10 chr2 14110208 14110309 -239146274 + MIR SINE MIR 75 175 -87 581 294 111 67 chr2 14113069 14113413 -239143170 - L2 LINE L2 -3 3310 2952 345 144 39 39 chr2 14114145 14114298 -239142285 + (TA)n Simple_repeat Simple_repeat 1 153 0 339 280 84 71 chr2 14114579 14115171 -239141412 + L1M4 LINE L1 4456 5055 -1091 6644 54 0 53 chr2 14115232 14116250 -239140333 + L1PA6 LINE L1 5214 6181 0 438 319 92 8 chr2 14116305 14116662 -239139921 - L1ME4a LINE L1 -153 5968 5582 381 322 64 25 chr2 14118168 14118404 -239138179 - L1ME LINE L1 -303 5818 5574 243 0 0 0 chr2 14119482 14119509 -239137074 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1332 94 89 52 chr2 14119952 14120165 -239136418 - AluSq SINE Alu -18 295 75 381 216 162 48 chr2 14120231 14120398 -239136185 - L2 LINE L2 0 3313 3128 453 257 65 14 chr2 14120610 14120762 -239135821 + MIR SINE MIR 30 187 -66 437 309 28 46 chr2 14121151 14121368 -239135215 - MIR SINE MIR -3 259 47 535 242 11 54 chr2 14121616 14121802 -239134781 + MER96B DNA MER1_type? 1 178 -239 233 193 193 0 chr2 14121858 14121915 -239134668 - MER58A DNA MER1_type -31 76 9 3601 194 167 62 chr2 14122581 14123792 -239132791 + MER52A LTR ERV1 240 1512 -65 288 138 17 35 chr2 14123787 14123845 -239132738 + MER52C LTR ERV1 1222 1278 0 * 352 192 19 0 chr2 14123997 14124101 -239132482 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 250 279 59 73 chr2 14125875 14126079 -239130504 + LTR67 LTR ERVL 357 557 0 314 234 52 0 chr2 14126575 14126652 -239129931 - MER94 DNA DNA -53 81 1 351 0 0 0 chr2 14126920 14126959 -239129624 + (CA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr2 14127655 14127677 -239128906 + AT_rich Low_complexity Low_complexity 1 22 0 332 309 24 16 chr2 14128835 14128961 -239127622 - MIR SINE MIR -27 235 109 429 294 120 40 chr2 14128962 14129237 -239127346 + L2 LINE L2 3017 3313 0 401 345 48 62 chr2 14129983 14130273 -239126310 + L2 LINE L2 2987 3272 0 2210 105 3 19 chr2 14131521 14131836 -239124747 - AluSp SINE Alu -3 310 1 218 307 71 39 chr2 14132204 14132331 -239124252 - L2 LINE L2 -1 3312 3182 22 0 0 0 chr2 14132572 14132594 -239123989 + AT_rich Low_complexity Low_complexity 1 22 0 247 273 235 16 chr2 14132830 14133013 -239123570 + LTR16C LTR ERVL 236 458 -33 996 315 36 8 chr2 14133388 14133753 -239122830 - LTR16A LTR ERVL 0 450 76 279 284 43 26 chr2 14134275 14134391 -239122192 + L2 LINE L2 2945 3062 -251 246 277 188 9 chr2 14134628 14134740 -239121843 + L2 LINE L2 3134 3265 -7 621 290 98 58 chr2 14136203 14136531 -239120052 - LTR67 LTR ERVL -10 547 207 220 109 18 36 chr2 14136765 14136820 -239119763 + (TCTCC)n Simple_repeat Simple_repeat 3 56 0 22 35 0 0 chr2 14137938 14137967 -239118616 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr2 14138495 14138539 -239118044 + AT_rich Low_complexity Low_complexity 1 44 0 1805 253 89 81 chr2 14138641 14138865 -239117718 + L1MC4 LINE L1 5706 5927 -1754 1137 265 95 55 chr2 14138865 14139432 -239117151 - MLT1E LTR MaLR 0 593 4 1805 253 89 81 chr2 14139432 14139486 -239117097 + L1MC4 LINE L1 5927 5979 -1702 336 64 0 0 chr2 14139486 14139533 -239117050 + (CA)n Simple_repeat Simple_repeat 1 47 0 1805 253 89 81 chr2 14139533 14140176 -239116407 + L1MC4 LINE L1 5979 6615 -1066 2321 93 0 0 chr2 14140176 14140486 -239116097 - AluY SINE Alu -1 310 1 1805 253 89 81 chr2 14140486 14141756 -239114827 + L1MC4 LINE L1 6615 7681 0 483 87 0 0 chr2 14142769 14142838 -239113745 + (GGAA)n Simple_repeat Simple_repeat 4 72 0 234 213 120 0 chr2 14142841 14142916 -239113667 + L1MC4a LINE L1 7724 7807 -1 237 234 0 0 chr2 14143072 14143119 -239113464 + GA-rich Low_complexity Low_complexity 1 47 0 311 266 108 38 chr2 14143337 14143495 -239113088 + HAL1 LINE L1 1501 1669 -838 1505 199 107 135 chr2 14144085 14145055 -239111528 + LTR1B LTR ERV1 1 1020 0 230 294 65 22 chr2 14145086 14145178 -239111405 + L2 LINE L2 3137 3232 -40 2041 50 7 5 chr2 14145531 14145818 -239110765 - L1PA3 LINE L1 -248 5907 5660 2090 65 4 0 chr2 14145820 14146096 -239110487 + L1PA3 LINE L1 5879 6155 0 401 293 68 14 chr2 14146506 14146653 -239109930 - MIR SINE MIR -13 249 95 193 351 95 7 chr2 14148120 14148268 -239108315 + MIR SINE MIR 30 190 -72 2665 3 3 0 chr2 14149681 14149970 -239106613 + AluYa5 SINE Alu 1 290 -21 1175 111 5 50 chr2 14150073 14150271 -239106312 - L1PA12 LINE L1 -292 5876 5688 5160 203 14 8 chr2 14150281 14151681 -239104902 - L1PA12 LINE L1 -564 5601 4193 1180 147 0 0 chr2 14151685 14151862 -239104721 + THE1B LTR MaLR 1 177 -187 308 343 105 37 chr2 14151890 14152243 -239104340 - L1MC/D LINE L1 -444 5798 5422 286 238 131 79 chr2 14152671 14152885 -239103698 - L3 LINE CR1 -175 1402 1178 535 323 53 8 chr2 14154382 14154645 -239101938 - LTR16A1 LTR ERVL -11 446 172 234 331 49 25 chr2 14154808 14154971 -239101612 - MIR3 SINE MIR -5 203 37 2652 178 4 13 chr2 14155391 14155852 -239100731 - LTR32 LTR ERVL 0 471 15 215 379 35 17 chr2 14156415 14156531 -239100052 + L3 LINE CR1 1230 1347 -230 2023 145 85 18 chr2 14156557 14156958 -239099625 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 14158360 14158381 -239098202 + AT_rich Low_complexity Low_complexity 1 21 0 1415 273 18 32 chr2 14158715 14159499 -239097084 + L1ME2 LINE L1 2999 3746 -2400 1298 221 158 9 chr2 14159532 14159854 -239096729 + MSTB LTR MaLR 1 370 -56 1111 60 7 0 chr2 14159869 14160018 -239096565 - L1PA4 LINE L1 -3 6152 6003 462 73 59 0 chr2 14160047 14160115 -239096468 + MSTB LTR MaLR 357 428 0 949 212 174 22 chr2 14160116 14160438 -239096145 + L1ME2 LINE L1 3785 4171 -1975 267 31 0 0 chr2 14160438 14160470 -239096113 + (TAA)n Simple_repeat Simple_repeat 2 33 0 949 212 174 22 chr2 14160470 14160515 -239096068 + L1ME2 LINE L1 4171 4208 -1938 1482 241 104 32 chr2 14160519 14161049 -239095534 + L1ME2 LINE L1 5586 6153 -11 2218 79 13 13 chr2 14161348 14161653 -239094930 + AluY SINE Alu 1 305 -6 288 384 30 45 chr2 14162066 14162264 -239094319 - MIR3 SINE MIR -6 202 8 333 0 0 0 chr2 14162319 14162356 -239094227 + (CA)n Simple_repeat Simple_repeat 1 37 0 21 0 0 0 chr2 14162856 14162877 -239093706 + AT_rich Low_complexity Low_complexity 1 21 0 208 0 0 59 chr2 14163271 14163305 -239093278 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 3306 214 29 42 chr2 14165383 14166205 -239090378 + MER52A LTR ERV1 232 1736 -19 508 238 86 13 chr2 14166220 14166371 -239090212 - MLT1H LTR MaLR -375 174 13 210 293 24 0 chr2 14167181 14167263 -239089320 + (TTCA)n Simple_repeat Simple_repeat 4 87 0 25 0 0 0 chr2 14167530 14167555 -239089028 + AT_rich Low_complexity Low_complexity 1 25 0 6890 97 10 5 chr2 14167835 14169644 -239086939 + L1PA7 LINE L1 4350 6152 -2 480 202 190 11 chr2 14169804 14170048 -239086535 - L1ME2 LINE L1 -203 6030 5712 306 167 32 8 chr2 14170048 14170140 -239086443 - L1P2 LINE L1 -675 5479 5382 1970 252 67 46 chr2 14170156 14170919 -239085664 - L1ME2 LINE L1 -721 5514 4727 735 239 12 12 chr2 14170919 14171086 -239085497 + FAM SINE Alu 2 168 -7 1970 252 67 46 chr2 14171086 14171514 -239085069 - L1ME2 LINE L1 -1508 4727 4310 1234 117 9 72 chr2 14171517 14171740 -239084843 - AluSq SINE Alu 0 313 105 2307 252 65 72 chr2 14171742 14171950 -239084633 - L1ME2 LINE L1 -1932 4283 4075 2250 111 0 0 chr2 14171950 14172257 -239084326 - AluSx SINE Alu -5 307 1 2307 252 65 72 chr2 14172257 14172849 -239083734 - L1ME2 LINE L1 -2140 4075 3480 1881 161 3 0 chr2 14172849 14173147 -239083436 - AluJo SINE Alu -11 301 3 2307 252 65 72 chr2 14173147 14173426 -239083157 - L1ME2 LINE L1 -2735 3480 3201 387 41 0 0 chr2 14173426 14173475 -239083108 + (CA)n Simple_repeat Simple_repeat 2 50 0 1997 176 42 33 chr2 14173485 14173911 -239082672 + Tigger2a DNA MER2_type 2 431 -3 441 0 0 0 chr2 14173914 14173963 -239082620 + (TG)n Simple_repeat Simple_repeat 2 50 0 2307 252 65 72 chr2 14173963 14174342 -239082241 - L1ME2 LINE L1 -3025 3190 2818 975 288 48 6 chr2 14174348 14174969 -239081614 - L1ME2 LINE L1 -3622 2593 1989 944 273 107 38 chr2 14175013 14175833 -239080750 - L1ME2 LINE L1 -4485 1911 1035 2051 193 82 66 chr2 14175846 14176635 -239079948 - MER52A LTR ERV1 -810 945 1 2255 109 0 7 chr2 14176969 14177272 -239079311 - AluSg SINE Alu -9 301 1 245 319 0 28 chr2 14178856 14178928 -239077655 + MIR SINE MIR 51 120 -142 21 36 0 0 chr2 14179047 14179075 -239077508 + AT_rich Low_complexity Low_complexity 1 28 0 522 266 110 12 chr2 14179425 14179598 -239076985 - L2 LINE L2 0 3313 3124 4591 200 23 7 chr2 14179988 14181012 -239075571 + L1 LINE L1 3278 4318 -1828 1966 165 67 20 chr2 14183435 14183840 -239072743 - MSTA LTR MaLR 0 428 5 774 302 36 4 chr2 14183869 14184121 -239072462 + MIR SINE MIR 1 260 -2 643 206 65 13 chr2 14185223 14185378 -239071205 - MIR SINE MIR -37 225 63 248 131 81 19 chr2 14186469 14186629 -239069954 + (TA)n Simple_repeat Simple_repeat 2 171 0 181 191 52 7 chr2 14186640 14186776 -239069807 + (TA)n Simple_repeat Simple_repeat 2 143 0 217 350 106 34 chr2 14186957 14187194 -239069389 - L2 LINE L2 -204 3068 2815 1156 235 26 53 chr2 14187958 14188413 -239068170 - L1MDa LINE L1 -2105 4435 3993 571 233 101 13 chr2 14188446 14188605 -239067978 - FRAM SINE Alu 0 40 1 398 276 114 20 chr2 14188750 14188996 -239067587 - L1MDa LINE L1 -4009 2531 2263 257 258 104 112 chr2 14190004 14190193 -239066390 + LTR41 LTR ERVL 510 698 -75 1550 103 9 5 chr2 14190193 14190407 -239066176 - AluSc SINE Alu -12 297 83 257 258 104 112 chr2 14190407 14190477 -239066106 + LTR41 LTR ERVL 698 767 -6 3082 94 61 2 chr2 14190873 14191332 -239065251 - LTR19A LTR ERV1 0 486 1 1632 143 4 16 chr2 14191887 14192138 -239064445 + AluSx SINE Alu 50 297 -15 284 296 42 22 chr2 14192603 14192708 -239063875 + MIR SINE MIR 39 143 -76 348 24 0 0 chr2 14193421 14193462 -239063121 + (CA)n Simple_repeat Simple_repeat 1 41 0 496 290 105 0 chr2 14193568 14193778 -239062805 + MIR SINE MIR 17 252 -10 539 114 0 11 chr2 14195374 14195462 -239061121 + Tigger2 DNA MER2_type 2399 2485 -233 235 194 81 0 chr2 14195463 14195525 -239061058 - L1MA4 LINE L1 -5 6295 6229 518 200 30 0 chr2 14195525 14195625 -239060958 - U6 snRNA snRNA 0 107 5 738 158 70 6 chr2 14195629 14195800 -239060783 + Tigger2 DNA MER2_type 2473 2654 -64 971 150 0 0 chr2 14195805 14195958 -239060625 - L1PA13 LINE L1 -20 6143 5991 234 191 0 24 chr2 14195965 14196007 -239060576 + Tigger2 DNA MER2_type 2667 2707 -11 1468 246 30 15 chr2 14196676 14196955 -239059628 + MER63B DNA MER1_type 1 289 -773 2201 115 7 0 chr2 14196955 14197259 -239059324 - AluSq SINE Alu -7 306 1 1468 246 30 15 chr2 14197259 14197386 -239059197 + MER63B DNA MER1_type 289 413 -23 4861 148 19 6 chr2 14197953 14199809 -239056774 - L1PA15 LINE L1 -7 6158 4261 2938 208 10 10 chr2 14199137 14199814 -239056769 - L1 LINE L1 -1214 4932 4256 381 338 22 22 chr2 14199830 14199966 -239056617 - MIR3 SINE MIR -15 193 58 2024 128 0 10 chr2 14200065 14200363 -239056220 - AluSc SINE Alu -14 295 1 350 317 14 41 chr2 14201635 14201780 -239054803 + L2 LINE L2 3173 3313 0 341 93 35 35 chr2 14201785 14201871 -239054712 + (TATATG)n Simple_repeat Simple_repeat 2 87 0 2158 128 3 10 chr2 14203035 14203347 -239053236 - AluSx SINE Alu -2 310 1 297 284 35 52 chr2 14203485 14203601 -239052982 + L2 LINE L2 3158 3271 -1 2127 143 0 0 chr2 14203950 14204258 -239052325 + AluSx SINE Alu 1 308 -4 258 321 22 44 chr2 14205681 14205818 -239050765 - L2 LINE L2 -213 3059 2926 282 318 88 7 chr2 14206357 14206505 -239050078 - MIR SINE MIR -68 194 35 1983 123 0 14 chr2 14207148 14207477 -239049106 + AluSx SINE Alu 1 325 0 224 246 94 70 chr2 14207505 14207676 -239048907 - MIR SINE MIR 0 262 88 244 314 0 0 chr2 14207756 14207826 -239048757 + MIR SINE MIR 85 154 -108 383 201 2 116 chr2 14208524 14208569 -239048014 + MSTC LTR MaLR 5 54 -342 2094 108 3 29 chr2 14208569 14208875 -239047708 + AluSq SINE Alu 1 298 -15 383 201 2 116 chr2 14208875 14208942 -239047641 + MSTC LTR MaLR 54 110 -286 200 355 78 27 chr2 14209977 14210233 -239046350 + L2 LINE L2 2951 3219 -94 182 272 74 62 chr2 14210252 14210333 -239046250 - MIR3 SINE MIR -17 191 110 259 377 44 6 chr2 14210613 14210772 -239045811 - MIR SINE MIR -12 250 86 248 300 75 17 chr2 14211485 14211605 -239044978 + MIR SINE MIR 81 207 -55 478 196 98 12 chr2 14211605 14211768 -239044815 - Charlie5 DNA MER1_type -27 2585 2409 186 43 0 0 chr2 14212207 14212230 -239044353 + (T)n Simple_repeat Simple_repeat 1 23 0 22 35 0 0 chr2 14212840 14212869 -239043714 + AT_rich Low_complexity Low_complexity 1 29 0 331 276 12 0 chr2 14212896 14213066 -239043517 + (TA)n Simple_repeat Simple_repeat 2 173 0 189 259 99 61 chr2 14213200 14213331 -239043252 + L2 LINE L2 2948 3083 -189 557 216 37 6 chr2 14213376 14213538 -239043045 - HsTC2 DNA Tc2 0 1900 1734 278 319 114 30 chr2 14213542 14213708 -239042875 - HsTC2 DNA Tc2 -1718 180 1 199 273 0 65 chr2 14213923 14214000 -239042583 + L2 LINE L2 3242 3313 0 711 164 40 109 chr2 14214843 14215044 -239041539 + MER5A DNA MER1_type 3 189 0 399 210 11 177 chr2 14215842 14216023 -239040560 + MER63 DNA MER1_type 7 783 -279 425 221 49 0 chr2 14216320 14216442 -239040141 + L1 LINE L1 4109 4236 -1910 204 109 36 18 chr2 14216514 14216569 -239040014 + (TA)n Simple_repeat Simple_repeat 1 56 0 3161 203 27 19 chr2 14216579 14217328 -239039255 + L1 LINE L1 4211 4965 -1181 658 212 0 0 chr2 14217329 14217447 -239039136 + Tigger7 DNA MER2_type 1 118 -615 466 261 119 54 chr2 14217731 14218210 -239038373 + MER34B LTR ERV1 6 565 0 306 211 11 84 chr2 14218211 14218306 -239038277 - MIR SINE MIR -101 161 74 6408 122 26 5 chr2 14218377 14219438 -239037145 + L1PBa LINE L1 1392 2475 -4388 363 44 0 0 chr2 14220143 14220188 -239036395 + (CA)n Simple_repeat Simple_repeat 2 46 0 361 350 145 14 chr2 14220416 14220767 -239035816 - L2 LINE L2 -1882 1432 1036 2807 246 48 14 chr2 14220927 14221899 -239034684 + L1MDa LINE L1 2546 3547 -2993 7089 45 7 6 chr2 14223508 14225157 -239031426 + L1PA4 LINE L1 4504 6155 0 1675 176 54 8 chr2 14225157 14225519 -239031064 + L1PB4 LINE L1 5769 6155 -1 610 338 107 13 chr2 14225523 14225908 -239030675 - ERVL LTR ERVL -948 4816 4396 22 0 0 0 chr2 14226113 14226135 -239030448 + AT_rich Low_complexity Low_complexity 1 22 0 307 312 175 7 chr2 14226335 14226489 -239030094 - LTR16C LTR ERVL -127 364 185 991 162 30 5 chr2 14226559 14226757 -239029826 - MER57B LTR ERV1 0 434 232 411 171 0 0 chr2 14228406 14228511 -239028072 + G-rich Low_complexity Low_complexity 1 105 0 280 304 33 0 chr2 14229438 14229530 -239027053 + MIR SINE MIR 109 203 -59 27 29 0 0 chr2 14229675 14229709 -239026874 + AT_rich Low_complexity Low_complexity 1 34 0 1742 237 86 0 chr2 14230605 14231061 -239025522 - MLT1D LTR MaLR -8 497 3 227 269 62 48 chr2 14231459 14231604 -239024979 + L2 LINE L2 2966 3112 -160 1582 209 94 30 chr2 14232125 14232593 -239023990 - Charlie1b DNA MER1_type -24 499 2 218 260 41 55 chr2 14233551 14233624 -239022959 - L2 LINE L2 -224 3048 2977 21 36 0 0 chr2 14234253 14234281 -239022302 + AT_rich Low_complexity Low_complexity 1 28 0 1360 124 0 0 chr2 14234281 14234491 -239022092 - L1MA1 LINE L1 0 6302 6093 638 217 121 24 chr2 14234756 14234922 -239021661 - MER101B LTR ERV1 -386 184 3 1612 200 113 45 chr2 14235750 14236357 -239020226 + LTR48B LTR ERV1 1 707 0 4111 196 66 39 chr2 14236377 14236571 -239020012 + L1MC3 LINE L1 6655 6842 -943 276 30 0 0 chr2 14236571 14236604 -239019979 + (GA)n Simple_repeat Simple_repeat 1 33 0 4111 196 66 39 chr2 14236604 14237007 -239019576 + L1MC3 LINE L1 6842 7232 -553 1206 209 90 11 chr2 14237007 14237284 -239019299 + AluJo SINE Alu 1 299 -3 4111 196 66 39 chr2 14237284 14237698 -239018885 + L1MC3 LINE L1 7232 7695 -90 373 215 0 0 chr2 14238807 14238872 -239017711 - AluJb SINE Alu -3 299 235 881 157 0 20 chr2 14238872 14239019 -239017564 - AluJb SINE Alu -168 144 1 1060 174 10 0 chr2 14239093 14239289 -239017294 + L1PBa LINE L1 3 200 -6663 755 144 0 0 chr2 14239291 14239409 -239017174 + L1PBa LINE L1 636 753 -6110 * 2537 100 22 0 chr2 14239398 14239768 -239016815 + L1PBa LINE L1 2309 2686 -4177 1091 217 13 0 chr2 14239871 14240101 -239016482 + L1MC1 LINE L1 6101 6333 0 230 284 60 0 chr2 14240878 14240945 -239015638 - L2 LINE L2 -35 3237 3167 1761 170 71 152 chr2 14241048 14241838 -239014745 + LTR8A LTR ERV1 2 727 0 21 0 0 0 chr2 14242327 14242348 -239014235 + AT_rich Low_complexity Low_complexity 1 21 0 4628 20 11 0 chr2 14244096 14244643 -239011940 + L1PA4 LINE L1 5601 6153 -2 198 278 22 56 chr2 14245008 14245098 -239011485 - MIR SINE MIR -123 139 53 192 294 106 0 chr2 14246091 14246176 -239010407 + MIR3 SINE MIR 90 183 -25 377 185 0 0 chr2 14247400 14247481 -239009102 - L1MB7 LINE L1 0 6184 6104 * 3054 236 7 15 chr2 14247478 14248204 -239008379 - L1MB8 LINE L1 -27 6151 5432 274 315 20 54 chr2 14248291 14248440 -239008143 + L1MC5 LINE L1 7751 7894 -67 307 304 33 0 chr2 14249379 14249471 -239007112 - MIR SINE MIR -83 125 31 2367 175 45 7 chr2 14249871 14250316 -239006267 + MLT1C LTR MaLR 4 465 -2 2044 141 0 3 chr2 14250632 14250930 -239005653 - AluSx SINE Alu -15 297 1 321 346 154 34 chr2 14251122 14251414 -239005169 - L3 LINE CR1 -852 725 399 209 338 13 13 chr2 14252696 14252773 -239003810 + MIR SINE MIR 47 123 -139 291 104 0 0 chr2 14252792 14252840 -239003743 + (TG)n Simple_repeat Simple_repeat 2 49 0 1508 165 11 15 chr2 14252884 14253156 -239003427 + AluJb SINE Alu 40 310 -2 247 368 75 11 chr2 14253312 14253486 -239003097 - MER5A DNA MER1_type -3 186 2 493 184 19 0 chr2 14255287 14255390 -239001193 + MER58 DNA MER1_type 2310 2414 -6 962 206 12 74 chr2 14255991 14256248 -239000335 - MLT1A1 LTR MaLR -124 241 1 272 100 0 20 chr2 14256386 14256436 -239000147 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1070 163 0 16 chr2 14256444 14256634 -238999949 - AluYa5 SINE Alu -19 292 106 898 89 51 25 chr2 14256742 14256900 -238999683 + L1PA5 LINE L1 5932 6093 -61 406 267 41 0 chr2 14256917 14257063 -238999520 + (TATATG)n Simple_repeat Simple_repeat 3 154 0 726 54 0 0 chr2 14257066 14257159 -238999424 + L1PA5 LINE L1 6058 6150 -4 225 132 40 53 chr2 14257406 14257482 -238999101 + (TA)n Simple_repeat Simple_repeat 1 75 0 359 224 0 0 chr2 14257521 14257588 -238998995 - ORSL DNA AcHobo -208 67 1 208 395 12 0 chr2 14257595 14257681 -238998902 + L2 LINE L2 2967 3053 -219 321 208 0 0 chr2 14258326 14258403 -238998180 + (TA)n Simple_repeat Simple_repeat 1 77 0 233 100 20 60 chr2 14260211 14260261 -238996322 + MER69 DNA AcHobo 6 53 -2473 477 132 0 33 chr2 14260261 14260337 -238996246 - AluJ/FRAM SINE Alu -1 311 237 1459 114 10 0 chr2 14260337 14260538 -238996045 - AluSq SINE Alu -110 203 1 477 132 0 33 chr2 14260538 14260552 -238996031 - AluJ/FRAM SINE Alu -75 237 224 288 355 91 69 chr2 14260771 14260952 -238995631 + L2 LINE L2 2837 3013 -259 2016 115 20 14 chr2 14260952 14261248 -238995335 + AluSx SINE Alu 1 298 -14 288 355 91 69 chr2 14261248 14261474 -238995109 + L2 LINE L2 3013 3253 -19 382 314 29 58 chr2 14261990 14262127 -238994456 - L2 LINE L2 -7 3265 3133 2405 144 30 37 chr2 14262185 14262616 -238993967 - MSTC LTR MaLR 0 428 1 254 305 150 18 chr2 14262702 14262869 -238993714 - L2 LINE L2 -523 2791 2603 365 329 111 5 chr2 14263664 14263871 -238992712 + MIR SINE MIR 17 245 -17 336 316 34 26 chr2 14265172 14265289 -238991294 + MER5B DNA MER1_type 1 118 -60 387 232 19 13 chr2 14265391 14265546 -238991037 + (TATATG)n Simple_repeat Simple_repeat 3 158 0 2301 136 42 57 chr2 14265558 14266052 -238990531 + L1MA9 LINE L1 5821 6307 -5 189 195 0 0 chr2 14266080 14266121 -238990462 + (TGGA)n Simple_repeat Simple_repeat 4 44 0 1077 190 37 48 chr2 14266122 14266390 -238990193 - L1MD2 LINE L1 -43 6316 6052 262 368 66 33 chr2 14267271 14267374 -238989209 - L2 LINE L2 0 3272 3161 2482 99 71 48 chr2 14267374 14267764 -238988819 + MLT2A1 LTR ERVL 1 403 -41 309 51 0 0 chr2 14267764 14267803 -238988780 + (TG)n Simple_repeat Simple_repeat 2 40 0 2482 99 71 48 chr2 14267803 14267846 -238988737 + MLT2A1 LTR ERVL 403 444 0 262 368 66 33 chr2 14267846 14267894 -238988689 - L2 LINE L2 -111 3161 3116 215 264 24 16 chr2 14268634 14268759 -238987824 + (TTA)n Simple_repeat Simple_repeat 3 128 0 232 271 83 31 chr2 14268849 14268945 -238987638 - MIR SINE MIR -66 142 42 186 143 0 0 chr2 14269278 14269313 -238987270 + (CA)n Simple_repeat Simple_repeat 2 36 0 326 359 51 18 chr2 14269423 14269582 -238987001 + MIR SINE MIR 25 194 -68 2355 69 10 0 chr2 14269582 14269872 -238986711 + AluSc SINE Alu 1 293 -16 326 359 51 18 chr2 14269872 14269929 -238986654 + MIR SINE MIR 194 248 -14 226 122 41 20 chr2 14270360 14270409 -238986174 + GA-rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr2 14270786 14270815 -238985768 + AT_rich Low_complexity Low_complexity 1 29 0 512 262 125 12 chr2 14270887 14271055 -238985528 - MER5A DNA MER1_type -2 187 1 2218 108 0 3 chr2 14271242 14271539 -238985044 + AluSc SINE Alu 1 296 -13 206 367 0 0 chr2 14272161 14272221 -238984362 + MIR SINE MIR 87 146 -62 24 32 0 0 chr2 14273282 14273313 -238983270 + AT_rich Low_complexity Low_complexity 1 31 0 275 281 34 0 chr2 14273600 14273689 -238982894 + MIR3 SINE MIR 111 202 -6 373 295 58 43 chr2 14274147 14274286 -238982297 - MIR3 SINE MIR -47 161 21 197 359 51 0 chr2 14275750 14275828 -238980755 + MIR3 SINE MIR 79 160 -48 262 360 36 0 chr2 14276032 14276143 -238980440 - L2 LINE L2 0 3272 3158 232 313 32 114 chr2 14276517 14276763 -238979820 - L2 LINE L2 -491 2823 2598 239 256 47 35 chr2 14277559 14277645 -238978938 + L3 LINE CR1 1348 1434 -143 2543 91 3 11 chr2 14277654 14278015 -238978568 - L1PA8 LINE L1 0 6172 5815 226 307 95 44 chr2 14278037 14278174 -238978409 + MIR SINE MIR 50 193 -69 345 304 156 49 chr2 14279655 14280103 -238976480 - L2 LINE L2 -632 2682 2187 2066 153 8 6 chr2 14280229 14280588 -238975995 + L1PA13 LINE L1 5788 6147 -16 25 0 0 0 chr2 14280592 14280617 -238975966 + AT_rich Low_complexity Low_complexity 1 25 0 557 191 71 0 chr2 14280672 14280798 -238975785 - MER45A DNA AcHobo 0 178 44 276 351 77 62 chr2 14280865 14281124 -238975459 + L2 LINE L2 3006 3268 -4 23 0 0 0 chr2 14281246 14281269 -238975314 + AT_rich Low_complexity Low_complexity 1 23 0 189 390 52 19 chr2 14281967 14282121 -238974462 - MER5A DNA MER1_type -7 182 24 7185 103 9 22 chr2 14282472 14283557 -238973026 - MER11C LTR ERVK 0 1071 1 313 273 80 0 chr2 14283763 14283851 -238972732 + L2 LINE L2 3219 3313 0 484 316 85 16 chr2 14283900 14284207 -238972376 - LTR16A LTR ERVL -8 442 115 3852 164 10 13 chr2 14284554 14285267 -238971316 - MER50 LTR ERV1 -23 711 1 201 143 0 0 chr2 14288859 14288894 -238967689 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 210 194 0 0 chr2 14289284 14289346 -238967237 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 591 157 86 60 chr2 14289485 14289668 -238966915 + MLT1B LTR MaLR 8 180 -194 1520 155 26 3 chr2 14290631 14290935 -238965648 - L1MA1 LINE L1 -58 6244 5934 1048 170 12 69 chr2 14291219 14291344 -238965239 + MER96B DNA MER1_type? 3 109 -308 2380 90 7 0 chr2 14291344 14291643 -238964940 + AluSq SINE Alu 1 301 -12 1048 170 12 69 chr2 14291643 14291764 -238964819 + MER96B DNA MER1_type? 109 235 -182 283 361 80 53 chr2 14294313 14294576 -238962007 - L2 LINE L2 -576 2738 2469 1361 209 46 19 chr2 14294926 14295381 -238961202 + MLT2A2 LTR ERVL 2 475 -40 388 89 33 22 chr2 14295381 14295471 -238961112 + (TA)n Simple_repeat Simple_repeat 2 92 0 331 111 0 0 chr2 14295471 14295525 -238961058 + MLT2A2 LTR ERVL 400 453 0 184 348 43 31 chr2 14295563 14295724 -238960859 + L2 LINE L2 2796 2958 -356 2770 256 23 56 chr2 14296012 14297300 -238959283 - L1M2 LINE L1 -2805 3577 2329 2541 223 57 16 chr2 14297316 14298038 -238958545 + L1M2 LINE L1 3571 4329 -2053 2149 85 17 0 chr2 14298038 14298331 -238958252 + AluY SINE Alu 1 298 -13 2541 223 57 16 chr2 14298331 14298401 -238958182 + L1M2 LINE L1 4329 4395 -1987 1301 169 66 42 chr2 14298529 14298873 -238957710 + Tigger7 DNA MER2_type 129 2431 -56 6474 194 127 29 chr2 14298873 14300472 -238956111 + MER52A LTR ERV1 1 1755 0 253 267 17 0 chr2 14300472 14300530 -238956053 + Tigger7 DNA MER2_type 2428 2486 -1 2373 192 27 10 chr2 14300533 14301338 -238955245 + L1M2 LINE L1 5203 6022 -526 354 344 23 0 chr2 14301900 14302028 -238954555 - L2 LINE L2 0 3313 3183 869 167 48 0 chr2 14303197 14303383 -238953200 + L1MA4A LINE L1 6098 6292 -11 201 407 11 0 chr2 14303500 14303591 -238952992 - MIR SINE MIR -77 131 40 14847 181 27 19 chr2 14303899 14306089 -238950494 + L1PA14 LINE L1 2049 4280 -1881 423 0 0 0 chr2 14306089 14306136 -238950447 + (TG)n Simple_repeat Simple_repeat 2 48 0 14847 181 27 19 chr2 14306136 14308034 -238948549 + L1PA14 LINE L1 4280 6161 0 360 64 0 0 chr2 14308075 14308122 -238948461 + (TG)n Simple_repeat Simple_repeat 2 48 0 260 281 110 12 chr2 14308195 14308277 -238948306 + MIR SINE MIR 30 119 -89 553 201 140 49 chr2 14308936 14309100 -238947483 + AluJb SINE Alu 134 312 0 277 195 11 23 chr2 14309108 14309195 -238947388 + GA-rich Low_complexity Low_complexity 5 90 0 259 295 0 54 chr2 14310657 14310786 -238945797 - ERVL LTR ERVL -384 5380 5259 1241 126 0 11 chr2 14310944 14311118 -238945465 - AluSg/x SINE Alu -9 303 132 567 250 133 28 chr2 14311126 14311306 -238945277 - ERVL LTR ERVL -691 5073 4875 2604 191 55 3 chr2 14311345 14311494 -238945089 + L1 LINE L1 4000 4140 -2006 216 0 0 0 chr2 14311494 14311518 -238945065 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 2604 191 55 3 chr2 14311518 14311945 -238944638 + L1 LINE L1 4140 4606 -1540 1173 239 71 13 chr2 14311969 14312342 -238944241 + L1 LINE L1 4950 5347 -799 180 0 0 0 chr2 14312342 14312362 -238944221 + (CTTG)n Simple_repeat Simple_repeat 2 21 0 1567 174 20 10 chr2 14312368 14312771 -238943812 - AluJo SINE Alu 0 407 2 2416 158 16 13 chr2 14312771 14313218 -238943365 + L1P5 LINE L1 5338 5785 -371 2041 85 17 30 chr2 14313218 14313513 -238943070 + AluY SINE Alu 1 291 -20 3796 260 53 39 chr2 14313518 14315585 -238940998 + L1ME LINE L1 3424 5528 -634 495 193 35 0 chr2 14316463 14316608 -238939975 + GA-rich Low_complexity Low_complexity 1 150 0 252 198 25 12 chr2 14317934 14318015 -238938568 + CT-rich Low_complexity Low_complexity 1 82 0 996 208 88 0 chr2 14318027 14318243 -238938340 - MLT1D LTR MaLR -270 235 1 2281 211 88 36 chr2 14318243 14319020 -238937563 + L1MDa LINE L1 1686 2502 -4038 1972 178 0 0 chr2 14319049 14319358 -238937225 + AluSx SINE Alu 1 309 -3 1613 192 0 51 chr2 14319487 14319800 -238936783 - AluJo SINE Alu -13 299 3 303 276 24 47 chr2 14319922 14320049 -238936534 - MIR SINE MIR -112 150 27 239 341 57 51 chr2 14321007 14321183 -238935400 + MIR3 SINE MIR 30 206 -2 300 333 24 16 chr2 14321486 14321609 -238934974 - MIR3 SINE MIR -83 125 2 199 327 82 9 chr2 14322592 14322702 -238933881 + MIR SINE MIR 33 150 -58 1793 182 3 3 chr2 14323606 14323914 -238932669 - AluJb SINE Alu -4 308 1 181 328 35 26 chr2 14324145 14324261 -238932322 + MIR3 SINE MIR 63 179 -29 212 277 60 12 chr2 14325245 14325328 -238931255 + MIR SINE MIR 17 103 -105 1758 158 3 11 chr2 14326660 14326984 -238929599 + AluSx SINE Alu 1 322 0 188 375 80 9 chr2 14327513 14327625 -238928958 + L2 LINE L2 3116 3235 -37 246 128 0 0 chr2 14327817 14327856 -238928727 + (GGATG)n Simple_repeat Simple_repeat 1 39 0 347 296 0 0 chr2 14327927 14328015 -238928568 - MIR SINE MIR -23 239 152 4678 205 103 16 chr2 14328068 14329342 -238927241 - Charlie1a DNA MER1_type -48 1407 24 286 290 100 10 chr2 14329367 14329467 -238927116 - MIR SINE MIR -120 142 34 1216 292 112 72 chr2 14330001 14331148 -238925435 + L2 LINE L2 1571 2762 -552 441 306 169 31 chr2 14331199 14331555 -238925028 + L2 LINE L2 2888 3292 -21 1939 133 3 7 chr2 14331673 14331959 -238924624 + AluSx SINE Alu 1 285 -27 10858 184 12 7 chr2 14332177 14335507 -238921076 + L1PB1 LINE L1 2803 6149 -2 337 319 0 0 chr2 14335532 14335623 -238920960 - MIR SINE MIR -170 92 2 413 304 37 51 chr2 14335975 14336076 -238920507 - MIR SINE MIR -1 261 160 1932 168 123 8 chr2 14336076 14336458 -238920125 - MSTA LTR MaLR 0 428 3 413 304 37 51 chr2 14336458 14336570 -238920013 - MIR SINE MIR -102 160 51 212 389 40 16 chr2 14336592 14336718 -238919865 - L2 LINE L2 -257 3015 2887 2441 144 67 8 chr2 14336830 14337232 -238919351 + MSTA LTR MaLR 3 428 0 21 57 0 0 chr2 14337875 14337910 -238918673 + AT_rich Low_complexity Low_complexity 1 35 0 2148 134 0 6 chr2 14337970 14338283 -238918300 + AluSx SINE Alu 1 311 -1 538 290 70 11 chr2 14339454 14339640 -238916943 - MIR SINE MIR -15 247 51 777 209 55 0 chr2 14339840 14340003 -238916580 - L1PA16 LINE L1 -4 6162 5991 375 265 56 31 chr2 14340327 14340489 -238916094 + MLT1C LTR MaLR 302 467 0 270 81 0 0 chr2 14340878 14340915 -238915668 + (CA)n Simple_repeat Simple_repeat 2 38 0 2144 149 49 0 chr2 14341461 14341811 -238914772 + L1MC1 LINE L1 5459 5825 -508 510 341 17 17 chr2 14342907 14343086 -238913497 + MIR SINE MIR 2 180 -82 291 289 248 8 chr2 14343109 14343230 -238913353 + L3 LINE CR1 1411 1560 -17 334 250 36 91 chr2 14343376 14343602 -238912981 + MIR SINE MIR 10 216 -46 1131 157 47 51 chr2 14345114 14345156 -238911427 + MER92B LTR ERV1 1 42 -594 2044 117 14 51 chr2 14345156 14345506 -238911077 + MER1B DNA MER1_type 1 337 0 1131 157 47 51 chr2 14345506 14345698 -238910885 + MER92B LTR ERV1 42 234 -402 494 178 47 0 chr2 14345704 14345811 -238910772 + MER92B LTR ERV1 525 636 0 202 321 124 37 chr2 14346471 14346689 -238909894 + MIR SINE MIR 20 256 -6 377 238 209 10 chr2 14347194 14347400 -238909183 + L1MC4 LINE L1 6459 6705 -1337 204 296 10 10 chr2 14347442 14347540 -238909043 + (TA)n Simple_repeat Simple_repeat 2 99 0 2025 261 54 11 chr2 14347540 14348185 -238908398 + L1MC4 LINE L1 6652 7324 -718 1563 217 42 17 chr2 14348195 14348600 -238907983 - LTR52 LTR ERVL -2 419 5 3718 258 32 21 chr2 14348605 14349594 -238906989 - LTR52-int LTR ERVL -1 3555 2328 2196 187 80 133 chr2 14349614 14350410 -238906173 - LTR28 LTR ERV1 0 1020 119 337 207 89 59 chr2 14350421 14350556 -238906027 - MER61B LTR ERV1 -286 139 1 950 221 0 44 chr2 14350556 14350782 -238905801 - LTR52-int LTR ERVL -1130 2426 2211 532 273 28 0 chr2 14350798 14350941 -238905642 + LTR52 LTR ERVL 259 405 -16 1656 233 68 68 chr2 14350954 14351662 -238904921 + L1MC4 LINE L1 7328 8035 -7 1620 249 98 18 chr2 14351746 14352685 -238903898 + L1ME3 LINE L1 5089 6127 -35 2195 115 3 0 chr2 14352782 14353078 -238903505 + AluSq SINE Alu 1 297 -16 7422 45 0 0 chr2 14353994 14354911 -238901672 + L1PA5 LINE L1 5235 6151 -3 328 294 89 44 chr2 14354917 14355097 -238901486 + L2 LINE L2 2619 2806 -508 4986 183 23 12 chr2 14356610 14358126 -238898457 + L1MA9 LINE L1 4784 6312 0 2503 139 10 17 chr2 14358993 14359409 -238897174 - MSTB LTR MaLR -10 405 5 1807 191 32 30 chr2 14359432 14359987 -238896596 + MLT2A2 LTR ERVL 3 554 0 5539 185 53 26 chr2 14359993 14361596 -238894987 - MLT1A1-int LTR MaLR -19 1632 6 202 329 12 12 chr2 14361682 14361767 -238894816 + MIR SINE MIR 53 137 -125 3697 208 32 11 chr2 14361802 14362786 -238893797 - Charlie1a DNA MER1_type 0 1455 372 1442 207 138 12 chr2 14362786 14363192 -238893391 + MER119 DNA MER1_type 1 457 -126 * 3797 149 42 8 chr2 14363169 14363907 -238892676 + Tigger3(Golem) DNA MER2_type 2266 3028 -1 1325 232 68 11 chr2 14364028 14364382 -238892201 - Charlie1a DNA MER1_type -1077 378 5 207 0 0 0 chr2 14364631 14364654 -238891929 + (T)n Simple_repeat Simple_repeat 1 23 0 1134 347 15 15 chr2 14365641 14366186 -238890397 - ERVL LTR ERVL -516 5248 4704 296 205 39 128 chr2 14366356 14366512 -238890071 - MLT1A1 LTR MaLR 0 396 255 577 200 63 117 chr2 14366571 14366776 -238889807 - MLT1A1 LTR MaLR -171 194 1 2625 245 113 78 chr2 14366776 14368030 -238888553 - MLT1A1-int LTR MaLR 0 1651 383 2161 126 3 3 chr2 14368030 14368332 -238888251 - AluSg SINE Alu -8 302 1 2625 245 113 78 chr2 14368332 14368727 -238887856 - MLT1A1-int LTR MaLR -1268 383 3 836 236 10 10 chr2 14368728 14368923 -238887660 - MLT1A1 LTR MaLR 0 365 171 893 182 25 45 chr2 14368938 14369136 -238887447 - MLT1A1 LTR MaLR -171 194 1 1438 188 177 24 chr2 14369241 14369672 -238886911 + MER66A LTR ERV1 97 474 -4 1372 235 92 40 chr2 14369680 14370204 -238886379 + MER66A-int LTR ERV1 1 551 -6125 7625 229 27 20 chr2 14370305 14372924 -238883659 + MER66A-int LTR ERV1 737 3120 -3211 436 236 0 18 chr2 14372902 14373012 -238883571 + MER66A-int LTR ERV1 3337 3444 -3232 * 394 273 9 0 chr2 14372950 14373060 -238883523 + LTR57-int LTR ERVL 1319 1429 -3914 * 1805 214 30 90 chr2 14373062 14373797 -238882786 + MER66A-int LTR ERV1 3744 4434 -2242 1482 228 0 0 chr2 14373812 14374119 -238882464 + AluJb SINE Alu 1 307 0 275 241 76 25 chr2 14374120 14374199 -238882384 + MER4B LTR ERV1 79 161 -449 386 225 58 58 chr2 14374200 14374338 -238882245 + MER66A-int LTR ERV1 5915 6052 -1704 2459 171 5 2 chr2 14374339 14374765 -238881818 + MER66A-int LTR ERV1 6250 6676 0 1473 196 72 56 chr2 14374802 14375254 -238881329 + MER66A LTR ERV1 97 478 0 669 333 44 43 chr2 14375882 14376240 -238880343 - HERVL LTR ERVL -1796 3702 3346 1157 240 66 6 chr2 14376240 14376557 -238880026 - MER58B DNA MER1_type -4 337 2 669 333 44 43 chr2 14376557 14376964 -238879619 - HERVL LTR ERVL -2152 3346 2939 282 266 48 8 chr2 14377084 14377208 -238879375 - L1ME3 LINE L1 -11 6151 6023 310 238 79 0 chr2 14377274 14377375 -238879208 - L1ME3 LINE L1 -272 5890 5782 2053 146 0 7 chr2 14377557 14377865 -238878718 + AluSq SINE Alu 1 306 -7 23 0 0 0 chr2 14378133 14378156 -238878427 + AT_rich Low_complexity Low_complexity 1 23 0 211 218 18 0 chr2 14428685 14428740 -238827843 + T-rich Low_complexity Low_complexity 4 59 0 2184 116 3 26 chr2 14428745 14429056 -238827527 - AluSq SINE Alu -9 304 1 2187 115 0 3 chr2 14429743 14430048 -238826535 + AluSx SINE Alu 1 304 -8 1915 140 48 0 chr2 14430754 14431046 -238825537 + AluSx SINE Alu 1 306 -6 219 203 0 0 chr2 14431903 14431962 -238824621 + (AATTG)n Simple_repeat Simple_repeat 2 60 0 399 323 118 4 chr2 14432196 14432425 -238824158 + MIR SINE MIR 2 256 -6 25 0 0 0 chr2 14433818 14433843 -238822740 + AT_rich Low_complexity Low_complexity 1 25 0 578 242 107 11 chr2 14434397 14434575 -238822008 + MIR SINE MIR 68 262 0 1095 252 93 45 chr2 14435606 14436141 -238820442 + MLT1E1 LTR MaLR 17 577 -77 341 290 145 0 chr2 14437066 14437252 -238819331 - L3 LINE CR1 -151 1426 1214 305 252 98 8 chr2 14437994 14438117 -238818466 + L1ME1 LINE L1 6021 6154 -12 2080 121 3 0 chr2 14438158 14438440 -238818143 + AluSq SINE Alu 1 283 -30 426 65 0 0 chr2 14438440 14438502 -238818081 + (TC)n Simple_repeat Simple_repeat 1 62 0 234 0 0 0 chr2 14438502 14438528 -238818055 + (TA)n Simple_repeat Simple_repeat 1 26 0 3879 176 46 24 chr2 14438528 14439537 -238817046 + L1MB8 LINE L1 5144 6175 -3 506 277 93 46 chr2 14439560 14439884 -238816699 + L1MC/D LINE L1 5279 5607 -854 474 306 71 39 chr2 14440739 14441049 -238815534 - L2 LINE L2 -153 3160 2841 1649 178 7 58 chr2 14441059 14441469 -238815114 + L1 LINE L1 4518 4906 -1240 1186 325 82 32 chr2 14441469 14442077 -238814506 - L2 LINE L2 -601 2713 2060 861 263 9 9 chr2 14442077 14442301 -238814282 - MER58A DNA MER1_type 0 224 1 1186 325 82 32 chr2 14442301 14442436 -238814147 - L2 LINE L2 -1254 2060 1933 1715 169 121 51 chr2 14442597 14442753 -238813830 + MLT1D LTR MaLR 1 145 -360 2243 182 37 13 chr2 14442753 14443209 -238813374 + MLT1C LTR MaLR 1 467 0 1715 169 121 51 chr2 14443209 14443372 -238813211 + MLT1D LTR MaLR 145 295 -210 3579 133 2 4 chr2 14443372 14443900 -238812683 - MER1A DNA MER1_type 0 527 1 1715 169 121 51 chr2 14443900 14444051 -238812532 + MLT1D LTR MaLR 295 505 0 524 316 102 0 chr2 14444979 14445204 -238811379 - MIR SINE MIR -9 253 6 287 323 120 0 chr2 14446210 14446368 -238810215 + MIR3 SINE MIR 26 202 -6 341 323 8 15 chr2 14446385 14446515 -238810068 + MIR SINE MIR 124 252 -10 195 381 50 50 chr2 14446777 14446995 -238809588 + L2 LINE L2 2872 3089 -183 476 299 43 16 chr2 14447056 14447240 -238809343 + L2 LINE L2 3120 3308 -5 282 294 10 58 chr2 14449059 14449224 -238807359 + MIR3 SINE MIR 72 197 -11 298 226 103 29 chr2 14449800 14449886 -238806697 - MIR SINE MIR -97 111 21 516 226 75 15 chr2 14449918 14450051 -238806532 - MIR3 SINE MIR -62 146 6 2206 100 4 0 chr2 14450220 14450525 -238806058 - AluSp SINE Alu 0 306 1 854 178 0 0 chr2 14450663 14450798 -238805785 + AluJb SINE Alu 1 135 -177 1332 199 72 0 chr2 14450798 14451075 -238805508 + AluJo SINE Alu 1 297 -15 188 239 62 62 chr2 14451290 14451403 -238805180 + L2 LINE L2 2679 2791 -523 222 37 0 0 chr2 14451675 14451702 -238804881 + (TG)n Simple_repeat Simple_repeat 1 27 0 1435 183 56 58 chr2 14452448 14452648 -238803935 + MLT1A1 LTR MaLR 5 206 -159 1921 156 0 0 chr2 14452648 14452963 -238803620 + AluSx SINE Alu 1 315 0 1435 183 56 58 chr2 14452963 14453121 -238803462 + MLT1A1 LTR MaLR 206 363 -2 405 0 0 0 chr2 14453122 14453167 -238803416 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 2280 119 0 3 chr2 14453270 14453581 -238803002 - AluSg SINE Alu 0 310 1 21 0 0 0 chr2 14453905 14453926 -238802657 + AT_rich Low_complexity Low_complexity 1 21 0 484 291 97 34 chr2 14453926 14454163 -238802420 - MIR SINE MIR -3 259 8 2245 97 3 10 chr2 14455668 14455967 -238800616 + AluSg SINE Alu 1 297 -13 362 390 22 7 chr2 14456030 14456166 -238800417 + L3 LINE CR1 1427 1564 -13 256 298 0 0 chr2 14456351 14456408 -238800175 + MIR SINE MIR 67 123 -85 208 231 22 66 chr2 14456480 14456571 -238800012 + MIR3 SINE MIR 122 208 0 250 302 35 12 chr2 14457349 14457435 -238799148 - MIR SINE MIR -6 256 169 962 279 24 16 chr2 14457706 14458075 -238798508 - LTR52 LTR ERVL -35 386 15 2350 83 3 6 chr2 14458076 14458388 -238798195 + AluY SINE Alu 1 311 0 583 234 28 0 chr2 14458405 14458546 -238798037 - L1MA6 LINE L1 -63 6237 6093 284 256 0 0 chr2 14458535 14458617 -238797966 + L1MA6 LINE L1 6212 6293 -7 * 380 281 52 9 chr2 14458643 14458853 -238797730 + LTR52 LTR ERVL 174 392 -29 37 0 0 0 chr2 14458860 14458897 -238797686 + AT_rich Low_complexity Low_complexity 1 37 0 270 327 48 0 chr2 14459484 14459588 -238796995 - MER91C DNA MER1_type -31 109 1 * 307 274 0 0 chr2 14459588 14459660 -238796923 - MIR SINE MIR -145 117 46 1354 319 85 26 chr2 14460464 14461312 -238795271 - L2 LINE L2 -187 3126 2224 196 236 55 136 chr2 14461465 14461538 -238795045 - L2 LINE L2 0 3272 3209 2108 138 0 0 chr2 14461538 14461842 -238794741 + AluSg SINE Alu 1 304 -6 196 236 55 136 chr2 14461842 14461878 -238794705 - L2 LINE L2 -63 3209 3172 195 323 61 20 chr2 14461959 14462058 -238794525 - L2 LINE L2 -218 3054 2952 430 337 138 25 chr2 14462218 14462544 -238794039 - L2 LINE L2 -556 2758 2396 330 307 38 99 chr2 14462548 14462760 -238793823 + MIR SINE MIR 31 229 -33 1950 202 46 6 chr2 14462763 14463243 -238793340 + MLT1D LTR MaLR 2 500 -5 740 86 17 26 chr2 14463881 14463998 -238792585 + AluSp/q SINE Alu 196 311 -2 206 146 229 0 chr2 14464019 14464067 -238792516 + MIR SINE MIR 89 147 -115 234 0 0 0 chr2 14465542 14465568 -238791015 + (A)n Simple_repeat Simple_repeat 1 26 0 185 309 55 82 chr2 14466185 14466295 -238790288 + MIR SINE MIR 37 143 -65 304 250 9 78 chr2 14467212 14467328 -238789255 - MIR SINE MIR -44 218 111 326 289 122 28 chr2 14467912 14468092 -238788491 - MIR3 SINE MIR -7 201 5 1039 32 6 26 chr2 14468144 14468300 -238788283 + (TAGA)n Simple_repeat Simple_repeat 2 154 0 1886 110 4 0 chr2 14468301 14468555 -238788028 - AluSq SINE Alu -29 284 30 2179 120 7 0 chr2 14468962 14469254 -238787329 + AluSg SINE Alu 1 294 -16 239 345 26 9 chr2 14469762 14469875 -238786708 + MIR SINE MIR 28 142 -120 183 243 0 100 chr2 14471797 14471867 -238784716 + MIR SINE MIR 133 195 -67 2570 55 0 0 chr2 14472487 14472798 -238783785 + AluY SINE Alu 1 311 0 237 374 116 55 chr2 14472991 14473320 -238783263 - L2 LINE L2 -1 3271 2923 1859 162 131 8 chr2 14473512 14473894 -238782689 - MER70B LTR ERVL -147 431 3 1904 139 17 7 chr2 14473996 14474290 -238782293 - AluJb SINE Alu -15 297 1 933 221 31 12 chr2 14474291 14474549 -238782034 - L1MDa LINE L1 -4539 2001 1739 536 243 0 0 chr2 14474552 14474663 -238781920 - MLT1C LTR MaLR -356 111 1 218 405 9 40 chr2 14474979 14475206 -238781377 - L2 LINE L2 -159 3113 2894 250 263 168 11 chr2 14475308 14475403 -238781180 + MIR SINE MIR 22 131 -131 337 353 15 7 chr2 14475504 14475640 -238780943 + MER91A DNA MER1_type 20 156 -40 419 318 145 14 chr2 14476153 14476367 -238780216 + MIR SINE MIR 5 246 -16 1817 184 0 3 chr2 14476902 14477196 -238779387 + AluJb SINE Alu 3 295 -17 230 318 0 59 chr2 14477536 14477621 -238778962 + MIR SINE MIR 7 86 -176 180 317 0 0 chr2 14477682 14477723 -238778860 + L2 LINE L2 3212 3252 -20 345 237 88 18 chr2 14477841 14477955 -238778628 + L2 LINE L2 3192 3313 0 5061 164 24 10 chr2 14478133 14479433 -238777150 - L1MA7 LINE L1 -10 6281 4963 5275 170 11 15 chr2 14479433 14480530 -238776053 + L1MA7 LINE L1 3865 4957 -1189 192 347 27 13 chr2 14480665 14480740 -238775843 + MIR SINE MIR 20 95 -167 22 0 0 0 chr2 14480983 14481005 -238775578 + AT_rich Low_complexity Low_complexity 1 22 0 2115 113 21 0 chr2 14481765 14482056 -238774527 + AluSc SINE Alu 1 297 -12 1860 181 72 31 chr2 14483529 14483985 -238772598 + MLT1D LTR MaLR 1 480 -25 1777 139 48 37 chr2 14483985 14484337 -238772246 - MER46B DNA MER2_type -4 232 2 1860 181 72 31 chr2 14484337 14484365 -238772218 + MLT1D LTR MaLR 480 505 0 21 0 0 0 chr2 14485465 14485486 -238771097 + AT_rich Low_complexity Low_complexity 1 21 0 938 180 22 6 chr2 14487412 14487595 -238768988 + MER5A DNA MER1_type 4 189 0 482 312 13 51 chr2 14488988 14489145 -238767438 + MIR3 SINE MIR 27 177 -31 1213 186 94 60 chr2 14489376 14489460 -238767123 + MLT1A1 LTR MaLR 1 81 -284 1559 77 0 14 chr2 14489460 14489669 -238766914 + AluY SINE Alu 105 310 -1 1213 186 94 60 chr2 14489669 14489934 -238766649 + MLT1A1 LTR MaLR 81 362 -3 554 302 217 1 chr2 14493243 14493451 -238763132 + MIR SINE MIR 3 252 -10 336 262 43 14 chr2 14494632 14494773 -238761810 + L1ME4a LINE L1 5738 5882 -239 269 318 130 21 chr2 14495431 14495623 -238760960 - MIR SINE MIR 0 262 50 867 190 63 0 chr2 14495910 14496084 -238760499 - L1PB4 LINE L1 0 6156 5972 225 239 128 9 chr2 14496265 14496374 -238760209 - MIR SINE MIR -15 247 126 439 304 87 33 chr2 14496498 14497014 -238759569 + L1ME4a LINE L1 5561 6104 -17 282 73 0 0 chr2 14498077 14498118 -238758465 + (TC)n Simple_repeat Simple_repeat 2 42 0 1880 229 29 43 chr2 14498246 14498761 -238757822 + MLT2B3 LTR ERVL 1 508 -46 489 143 0 0 chr2 14498772 14498856 -238757727 + MLT2A2 LTR ERVL 366 449 -4 226 261 54 0 chr2 14499129 14499221 -238757362 + GA-rich Low_complexity Low_complexity 3 99 0 811 192 0 0 chr2 14499679 14499809 -238756774 - FRAM SINE Alu -38 138 9 186 244 81 105 chr2 14500476 14500562 -238756021 - L3b LINE CR1 -232 1351 1268 288 312 81 102 chr2 14500656 14500766 -238755817 + MIR3 SINE MIR 17 123 -85 1033 203 74 7 chr2 14500766 14501062 -238755521 + MER33 DNA MER1_type 5 320 -4 288 312 81 102 chr2 14501062 14501137 -238755446 + MIR3 SINE MIR 123 198 -10 281 287 8 74 chr2 14503045 14503167 -238753416 - MIR3 SINE MIR -36 172 59 2739 91 10 5 chr2 14503506 14503904 -238752679 + MLT2A1 LTR ERVL 1 400 -44 243 0 0 0 chr2 14503930 14503957 -238752626 + (TA)n Simple_repeat Simple_repeat 2 28 0 366 74 0 0 chr2 14503957 14504011 -238752572 + MLT2A1 LTR ERVL 399 452 -1 1785 157 13 0 chr2 14504786 14505086 -238751497 - L1MB1 LINE L1 -122 6046 5743 622 149 70 0 chr2 14505086 14505190 -238751393 + L1MB1 LINE L1 6047 6168 0 275 229 16 0 chr2 14505210 14505271 -238751312 + MIR SINE MIR 198 259 -3 277 209 0 45 chr2 14505282 14505300 -238751283 + AluSg/x SINE Alu 121 135 -167 2197 120 3 0 chr2 14505300 14505600 -238750983 + AluSq SINE Alu 1 301 -12 841 209 18 0 chr2 14506124 14506287 -238750296 + FRAM SINE Alu 1 166 0 23 0 0 0 chr2 14506327 14506350 -238750233 + AT_rich Low_complexity Low_complexity 1 23 0 324 224 88 20 chr2 14506376 14506523 -238750060 + L1MDb LINE L1 1194 1350 -5059 426 223 47 47 chr2 14506562 14506710 -238749873 + L1M4 LINE L1 4203 4350 -1796 216 342 90 34 chr2 14506916 14507150 -238749433 + L2 LINE L2 2989 3235 -37 268 278 56 68 chr2 14507470 14507632 -238748951 + MIR SINE MIR 89 248 -14 2321 67 0 41 chr2 14507713 14508028 -238748555 + AluY SINE Alu 1 302 -9 1088 141 6 0 chr2 14508038 14508208 -238748375 + AluSg/x SINE Alu 142 312 0 456 227 45 9 chr2 14510130 14510240 -238746343 - MLT1I LTR MaLR 0 409 296 1404 213 59 0 chr2 14510784 14511057 -238745526 - AluSx SINE Alu -23 289 1 23 0 0 0 chr2 14511932 14511955 -238744628 + AT_rich Low_complexity Low_complexity 1 23 0 420 147 0 0 chr2 14512492 14512567 -238744016 + (GGAA)n Simple_repeat Simple_repeat 3 77 0 253 293 54 27 chr2 14512840 14512987 -238743596 - L1ME3A LINE L1 -15 6155 6005 363 284 0 20 chr2 14513557 14513659 -238742924 - MIR3 SINE MIR -26 182 83 2114 136 3 0 chr2 14514128 14514437 -238742146 - AluSx SINE Alu -2 310 1 1514 166 147 3 chr2 14514817 14515130 -238741453 + MER46B DNA MER2_type 1 233 -3 399 344 22 28 chr2 14515143 14515323 -238741260 - MIR3 SINE MIR -15 193 15 215 167 24 0 chr2 14515451 14515493 -238741090 + MIR SINE MIR 108 150 -112 220 277 46 0 chr2 14515574 14515639 -238740944 + MIR SINE MIR 81 148 -114 420 313 8 15 chr2 14516939 14517073 -238739510 - MER5B DNA MER1_type -42 136 4 205 146 42 0 chr2 14517297 14517345 -238739238 + (TA)n Simple_repeat Simple_repeat 2 51 0 287 268 12 12 chr2 14518408 14518490 -238738093 - MLT1I LTR MaLR -6 403 322 267 224 95 82 chr2 14518659 14518806 -238737777 - MLT1J2 LTR MaLR -301 149 1 180 328 78 16 chr2 14518841 14518905 -238737678 - L2 LINE L2 -229 3084 3017 206 316 45 51 chr2 14519161 14519338 -238737245 + L2 LINE L2 2435 2610 -704 744 168 41 77 chr2 14519349 14519545 -238737038 + MLT1A2 LTR MaLR 13 201 -164 2212 141 29 6 chr2 14519555 14519902 -238736681 - THE1A LTR MaLR 0 355 1 2266 69 14 0 chr2 14519902 14520192 -238736391 - THE1A-int LTR MaLR 0 1580 1287 775 218 26 0 chr2 14520192 14520348 -238736235 + MLT1A2 LTR MaLR 215 374 0 280 321 115 48 chr2 14520527 14520857 -238735726 + L2 LINE L2 2916 3267 -5 1812 106 0 109 chr2 14521040 14521361 -238735222 + AluSc SINE Alu 3 288 -21 647 338 14 0 chr2 14521366 14521576 -238735007 - MIR SINE MIR -8 254 42 706 339 77 50 chr2 14522242 14522632 -238733951 - L2 LINE L2 0 3272 2894 2079 123 0 0 chr2 14522632 14522950 -238733633 + AluSx SINE Alu 1 318 0 706 339 77 50 chr2 14522950 14524217 -238732366 - L2 LINE L2 -378 2894 1496 191 327 67 19 chr2 14524376 14524480 -238732103 + MIR3 SINE MIR 4 112 -96 442 291 16 16 chr2 14524687 14524814 -238731769 - MER5A DNA MER1_type -23 166 40 1119 234 58 69 chr2 14526103 14526552 -238730031 - MLT1J2 LTR MaLR 0 450 7 603 272 113 25 chr2 14527216 14527455 -238729128 - MIR SINE MIR 0 262 3 223 303 0 30 chr2 14528524 14528590 -238727993 + MIR SINE MIR 82 145 -63 183 156 0 0 chr2 14529877 14529909 -238726674 + (AGCGG)n Simple_repeat Simple_repeat 2 33 0 212 158 0 0 chr2 14530385 14530423 -238726160 + (CA)n Simple_repeat Simple_repeat 2 39 0 25 31 0 0 chr2 14531707 14531739 -238724844 + GC_rich Low_complexity Low_complexity 1 32 0 26 64 0 0 chr2 14532285 14532332 -238724251 + GC_rich Low_complexity Low_complexity 1 47 0 189 107 0 0 chr2 14534179 14534207 -238722376 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 189 0 0 0 chr2 14535546 14535567 -238721016 + (A)n Simple_repeat Simple_repeat 1 21 0 330 253 0 0 chr2 14536286 14536385 -238720198 + (TA)n Simple_repeat Simple_repeat 2 100 0 225 0 0 0 chr2 14536436 14536461 -238720122 + (CA)n Simple_repeat Simple_repeat 2 26 0 746 154 51 82 chr2 14538247 14538442 -238718141 + MER53 DNA DNA 1 189 0 193 346 121 25 chr2 14538941 14539210 -238717373 + L2 LINE L2 2760 3047 -225 228 384 26 20 chr2 14543211 14543362 -238713221 - MIR SINE MIR -79 183 32 1444 200 67 67 chr2 14544801 14545166 -238711417 + MLT1A1 LTR MaLR 1 383 0 1800 221 84 12 chr2 14545589 14546077 -238710506 - Charlie1b DNA MER1_type 0 523 1 2004 184 17 6 chr2 14547089 14547442 -238709141 + MLT1A1 LTR MaLR 2 358 -7 640 318 23 10 chr2 14547931 14548233 -238708350 - L1ME4a LINE L1 -218 5903 5598 779 299 36 21 chr2 14548738 14549125 -238707458 - L1ME LINE L1 -530 5574 5189 1822 117 4 0 chr2 14549348 14549624 -238706959 + AluY SINE Alu 34 310 0 451 265 89 63 chr2 14549844 14550200 -238706383 - L1ME LINE L1 -1094 4986 4606 639 305 5 5 chr2 14550210 14550410 -238706173 - L1ME LINE L1 -1979 4101 3902 1966 261 80 10 chr2 14550415 14551013 -238705570 + L1ME3A LINE L1 5446 6085 -85 27 29 0 0 chr2 14551013 14551047 -238705536 + AT_rich Low_complexity Low_complexity 1 34 0 334 341 14 7 chr2 14551167 14551305 -238705278 + MIR3 SINE MIR 59 197 -11 1580 219 42 28 chr2 14551534 14551894 -238704689 - MLT1A1 LTR MaLR 0 365 1 593 289 107 39 chr2 14552217 14552581 -238704002 + MLT1J LTR MaLR 123 511 0 767 278 92 48 chr2 14553263 14553634 -238702949 - L2 LINE L2 -7 3306 2920 216 256 0 0 chr2 14553995 14554034 -238702549 - L2 LINE L2 -33 3239 3201 274 294 179 32 chr2 14554181 14554399 -238702184 + MIR SINE MIR 13 262 0 355 245 19 3 chr2 14554522 14554650 -238701933 - HsTC2 DNA Tc2 -44 1854 6 778 258 129 7 chr2 14555039 14555787 -238700796 - L1ME LINE L1 -3242 2838 1923 920 304 86 54 chr2 14555797 14557381 -238699202 - L1ME LINE L1 -4376 1885 3 263 295 71 45 chr2 14557390 14557502 -238699081 + MER5B DNA MER1_type 41 155 -23 27 0 0 0 chr2 14558043 14558070 -238698513 + AT_rich Low_complexity Low_complexity 1 27 0 27 29 0 0 chr2 14558256 14558290 -238698293 + AT_rich Low_complexity Low_complexity 1 34 0 327 25 0 0 chr2 14559052 14559092 -238697491 + (TG)n Simple_repeat Simple_repeat 2 41 0 2782 40 0 0 chr2 14559263 14559613 -238696970 - L1PA2 LINE L1 -838 5308 4959 7552 9 2 0 chr2 14559613 14560470 -238696113 + L1PA2 LINE L1 5295 6155 0 311 258 43 86 chr2 14561474 14561660 -238694923 - L1ME LINE L1 -532 5589 5412 27 62 0 0 chr2 14561699 14561747 -238694836 + AT_rich Low_complexity Low_complexity 1 48 0 252 122 0 0 chr2 14561747 14561788 -238694795 + (TA)n Simple_repeat Simple_repeat 2 42 0 958 155 7 7 chr2 14561789 14561944 -238694639 - AluSg/x SINE Alu -21 291 137 246 164 0 0 chr2 14562117 14562172 -238694411 + (TA)n Simple_repeat Simple_repeat 2 56 0 321 345 20 14 chr2 14562349 14562497 -238694086 - LTR67 LTR ERVL -1 556 408 1009 264 28 12 chr2 14562759 14563013 -238693570 - MIR SINE MIR -1 261 4 180 74 0 0 chr2 14563215 14563242 -238693341 + L2 LINE L2 3287 3313 0 560 259 52 60 chr2 14563298 14563530 -238693053 + LTR33 LTR ERVL 1 230 -291 456 235 0 26 chr2 14563639 14563754 -238692829 + LTR33 LTR ERVL 385 496 -25 31 0 0 0 chr2 14563913 14563944 -238692639 + AT_rich Low_complexity Low_complexity 1 31 0 566 292 84 100 chr2 14563964 14564857 -238691726 - L1ME LINE L1 -1605 4541 3660 407 284 140 54 chr2 14566916 14567381 -238689202 - MLT1H LTR MaLR -15 534 30 317 372 100 46 chr2 14567774 14568013 -238688570 + L2 LINE L2 3021 3272 0 309 265 25 86 chr2 14568184 14568346 -238688237 + MIR3 SINE MIR 51 202 -6 501 314 47 21 chr2 14570154 14570345 -238686238 + MIR3 SINE MIR 1 196 -12 516 263 137 21 chr2 14570392 14570582 -238686001 - MIR SINE MIR -23 239 28 273 299 95 8 chr2 14570675 14570805 -238685778 - MIR3 SINE MIR -44 164 21 320 287 77 21 chr2 14571162 14571305 -238685278 - MIR3 SINE MIR -9 199 49 2201 125 3 0 chr2 14571326 14571637 -238684946 - AluSx SINE Alu 0 312 1 278 221 79 142 chr2 14571710 14571762 -238684821 - MLT1I LTR MaLR -141 268 214 2222 181 37 22 chr2 14571762 14572220 -238684363 + MLT1C LTR MaLR 3 467 0 278 221 79 142 chr2 14572220 14572357 -238684226 - MLT1I LTR MaLR -195 214 91 21 0 0 0 chr2 14572729 14572750 -238683833 + AT_rich Low_complexity Low_complexity 1 21 0 600 162 18 9 chr2 14573110 14573221 -238683362 + MER81 DNA DNA 1 112 -2 371 252 37 0 chr2 14573322 14573429 -238683154 + MER81 DNA DNA 1 111 -3 569 216 40 8 chr2 14573443 14573568 -238683015 - MIR SINE MIR -63 145 17 229 387 0 9 chr2 14574034 14574145 -238682438 + MIR SINE MIR 33 142 -66 231 331 39 45 chr2 14574254 14574408 -238682175 + MIR SINE MIR 26 178 -84 195 42 0 0 chr2 14574615 14574639 -238681944 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 30 0 0 0 chr2 14574695 14574725 -238681858 + AT_rich Low_complexity Low_complexity 1 30 0 455 274 77 69 chr2 14574761 14575035 -238681548 - MLT1J LTR MaLR 0 511 236 265 254 30 0 chr2 14575359 14575426 -238681157 - MLT1L LTR MaLR -546 69 1 22 35 0 0 chr2 14575707 14575736 -238680847 + AT_rich Low_complexity Low_complexity 1 29 0 21 89 0 0 chr2 14575890 14575946 -238680637 + AT_rich Low_complexity Low_complexity 1 56 0 248 240 150 10 chr2 14577422 14577522 -238679061 - MIR SINE MIR -73 189 76 1466 66 0 0 chr2 14577574 14577788 -238678795 + L1PA8 LINE L1 5966 6179 0 1558 333 107 17 chr2 14578666 14579631 -238676952 + L2 LINE L2 417 1468 -1846 2192 162 38 23 chr2 14579820 14579859 -238676724 - MLT2A2 LTR ERVL 0 554 517 495 0 0 0 chr2 14579859 14579914 -238676669 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2192 162 38 23 chr2 14579914 14580409 -238676174 - MLT2A2 LTR ERVL -37 517 1 2187 269 119 61 chr2 14580410 14581603 -238674980 + L2 LINE L2 1527 2788 -526 1919 145 0 0 chr2 14582120 14582450 -238674133 + AluSx SINE Alu 1 330 0 242 318 16 0 chr2 14582589 14582652 -238673931 + L2 LINE L2 3123 3186 -86 2367 227 39 6 chr2 14583652 14584168 -238672415 - MER87 LTR ERV1 -6 535 3 381 22 0 0 chr2 14584239 14584285 -238672298 + (CA)n Simple_repeat Simple_repeat 2 47 0 1149 315 95 34 chr2 14584526 14585176 -238671407 - L1MEc LINE L1 -5676 720 31 209 361 12 0 chr2 14585798 14585881 -238670702 - MIR SINE MIR -74 134 51 351 340 52 36 chr2 14586367 14586561 -238670022 + L3 LINE CR1 1247 1443 -134 6163 29 4 0 chr2 14586757 14587489 -238669094 + L1PA4 LINE L1 5417 6151 -4 22 0 0 0 chr2 14587709 14587731 -238668852 + AT_rich Low_complexity Low_complexity 1 22 0 7260 69 159 28 chr2 14588491 14589610 -238666973 - MER11A LTR ERVK 0 1266 1 185 377 149 11 chr2 14591035 14591210 -238665373 + L2 LINE L2 2958 3156 -116 193 200 36 73 chr2 14591266 14591321 -238665262 - L2 LINE L2 -1 3271 3219 * 339 339 35 9 chr2 14591312 14591427 -238665156 + L2 LINE L2 3151 3268 -4 309 51 0 0 chr2 14592001 14592040 -238664543 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr2 14592170 14592205 -238664378 + AT_rich Low_complexity Low_complexity 1 35 0 308 44 0 0 chr2 14592698 14592743 -238663840 + L1PA3 LINE L1 6111 6155 0 1886 198 83 30 chr2 14593445 14593905 -238662678 - MLT1D LTR MaLR 0 505 22 530 298 192 0 chr2 14593973 14594181 -238662402 - MIR SINE MIR -2 260 13 309 26 0 0 chr2 14595065 14595103 -238661480 + (CA)n Simple_repeat Simple_repeat 2 39 0 231 239 194 0 chr2 14595273 14595340 -238661243 + MIR SINE MIR 36 115 -93 232 333 21 43 chr2 14595464 14595557 -238661026 + L2 LINE L2 3181 3271 -1 2181 169 48 0 chr2 14596193 14596571 -238660012 + MSTD LTR MaLR 1 396 0 521 263 50 53 chr2 14596923 14597185 -238659398 + MIR SINE MIR 2 262 0 22 0 0 0 chr2 14597319 14597341 -238659242 + AT_rich Low_complexity Low_complexity 1 22 0 197 350 150 0 chr2 14597971 14598051 -238658532 - L2 LINE L2 -47 3225 3134 960 209 121 85 chr2 14598140 14598527 -238658056 - MER57A LTR ERV1 0 403 3 344 286 157 31 chr2 14598603 14598858 -238657725 - L2 LINE L2 -337 2977 2691 409 325 32 0 chr2 14599193 14599347 -238657236 + MIR SINE MIR 101 259 -3 609 329 76 4 chr2 14599410 14599647 -238656936 - MIR SINE MIR -5 257 4 216 227 76 15 chr2 14599647 14599712 -238656871 + MIR SINE MIR 63 131 -77 326 296 56 24 chr2 14599712 14599837 -238656746 + MLT1J2 LTR MaLR 32 160 -290 1149 284 30 62 chr2 14600016 14600618 -238655965 + HsTC2a DNA Tc2 1 583 -161 1195 304 61 39 chr2 14600618 14601262 -238655321 + L1ME LINE L1 5 662 -5408 193 288 17 17 chr2 14601303 14601362 -238655221 + MIR SINE MIR 76 134 -128 25 0 0 0 chr2 14601366 14601391 -238655192 + AT_rich Low_complexity Low_complexity 1 25 0 225 310 69 88 chr2 14602004 14602220 -238654363 + MIR SINE MIR 1 212 -50 204 125 0 0 chr2 14602635 14602667 -238653916 + (T)n Simple_repeat Simple_repeat 1 32 0 1621 213 89 9 chr2 14603283 14603711 -238652872 - MLT1C LTR MaLR 0 467 6 403 248 88 22 chr2 14604480 14604617 -238651966 - MIR SINE MIR 0 262 117 290 217 0 17 chr2 14604805 14604865 -238651718 + MIR SINE MIR 95 153 -109 342 347 60 40 chr2 14605422 14605572 -238651011 - MIR3 SINE MIR -11 197 45 820 198 89 10 chr2 14605608 14605810 -238650773 - MER20 DNA MER1_type 0 219 2 394 301 38 107 chr2 14606105 14606394 -238650189 + L2 LINE L2 2996 3264 -8 2222 161 46 10 chr2 14606435 14606978 -238649605 - L1M2 LINE L1 -743 5403 4971 4025 125 37 97 chr2 14606995 14607114 -238649469 + L1MA6 LINE L1 5536 5661 -639 2457 86 0 6 chr2 14607114 14607427 -238649156 + AluY SINE Alu 1 311 0 4025 125 37 97 chr2 14607427 14607643 -238648940 + L1MA6 LINE L1 5661 5888 -412 291 143 20 0 chr2 14607643 14607727 -238648856 - AluS SINE Alu 0 316 232 4025 125 37 97 chr2 14607727 14608155 -238648428 + L1MA6 LINE L1 5888 6300 0 1239 145 208 25 chr2 14608683 14608945 -238647638 + AluSx SINE Alu 1 306 0 207 386 90 7 chr2 14611964 14612109 -238644474 - L2 LINE L2 -333 2980 2824 248 204 56 74 chr2 14612473 14612581 -238644002 + MLT1K LTR MaLR 181 286 -302 1154 221 28 0 chr2 14612966 14613183 -238643400 - MER58A DNA MER1_type 0 224 2 371 295 48 42 chr2 14613780 14613946 -238642637 + MIR SINE MIR 68 234 -28 225 298 116 25 chr2 14614380 14614501 -238642082 + MIR3 SINE MIR 38 169 -39 507 284 96 23 chr2 14614817 14615035 -238641548 + MIR SINE MIR 25 258 -4 193 314 29 29 chr2 14615527 14615597 -238640986 - L2 LINE L2 -3 3269 3200 2031 124 56 25 chr2 14615790 14616145 -238640438 + THE1C LTR MaLR 10 375 0 284 377 27 0 chr2 14616984 14617130 -238639453 + L3 LINE CR1 1236 1385 -192 213 154 0 0 chr2 14617437 14617476 -238639107 + CT-rich Low_complexity Low_complexity 2 40 0 339 113 0 0 chr2 14617476 14617529 -238639054 + (CA)n Simple_repeat Simple_repeat 1 53 0 2049 131 0 13 chr2 14617692 14617997 -238638586 + AluSx SINE Alu 1 301 -11 566 208 22 38 chr2 14618388 14618573 -238638010 + LTR45 LTR ERV1 304 524 -1 253 296 241 25 chr2 14618693 14618896 -238637687 - MIR SINE MIR -14 248 2 24 32 0 0 chr2 14619376 14619407 -238637176 + AT_rich Low_complexity Low_complexity 1 31 0 201 355 120 22 chr2 14619677 14619860 -238636723 + MIR SINE MIR 49 249 -13 720 260 57 16 chr2 14619978 14620170 -238636413 - MIR SINE MIR -44 218 19 1031 222 23 36 chr2 14620197 14620418 -238636165 + MER20 DNA MER1_type 1 218 -1 312 336 43 50 chr2 14620913 14621053 -238635530 - MIR3 SINE MIR -49 159 21 489 266 72 22 chr2 14622368 14622507 -238634076 - MIR3 SINE MIR -49 159 14 404 48 63 48 chr2 14622826 14622889 -238633694 - L1PA4 LINE L1 -3 6152 6089 1977 199 33 20 chr2 14623482 14623873 -238632710 - MSTD LTR MaLR 0 396 1 333 346 31 15 chr2 14623964 14624094 -238632489 + MIR SINE MIR 20 151 -111 2018 174 83 25 chr2 14625196 14625604 -238630979 + MSTB1 LTR MaLR 1 432 0 232 250 48 77 chr2 14625968 14626072 -238630511 - L2 LINE L2 0 3313 3213 315 347 8 0 chr2 14626676 14626797 -238629786 + LTR16B LTR ERVL 4 125 -339 455 171 184 32 chr2 14626834 14626992 -238629591 + MER96B DNA MER1_type? 49 230 -187 734 293 81 3 chr2 14626997 14627294 -238629289 + LTR16B LTR ERVL 145 464 0 213 39 0 0 chr2 14627520 14627546 -238629037 + (TATG)n Simple_repeat Simple_repeat 2 27 0 485 315 91 14 chr2 14630704 14630923 -238625660 - MIR SINE MIR -7 255 20 2196 170 29 10 chr2 14631044 14631427 -238625156 - MLT1B LTR MaLR 0 390 1 415 251 56 127 chr2 14632102 14632480 -238624103 + MLT1J LTR MaLR 128 478 -33 2032 116 41 0 chr2 14632649 14632943 -238623640 + AluSc SINE Alu 1 306 -3 449 274 6 45 chr2 14633215 14633372 -238623211 - L2 LINE L2 -1 3312 3162 210 261 0 0 chr2 14633375 14633421 -238623162 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 201 211 128 83 chr2 14633478 14633587 -238622996 + MIR3 SINE MIR 92 205 -3 279 0 0 0 chr2 14633917 14633948 -238622635 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1272 241 65 6 chr2 14635883 14636235 -238620348 + MLT1C LTR MaLR 95 467 0 440 281 50 7 chr2 14637321 14637460 -238619123 + MIR SINE MIR 116 260 -2 197 176 0 20 chr2 14637478 14637529 -238619054 + GA-rich Low_complexity Low_complexity 1 50 0 2117 204 30 42 chr2 14637802 14638308 -238618275 + MLT1D LTR MaLR 3 502 -3 608 270 131 18 chr2 14639663 14639885 -238616698 + MIR SINE MIR 4 250 -12 279 285 114 32 chr2 14639887 14640010 -238616573 + MIR SINE MIR 34 140 -68 222 276 145 0 chr2 14641243 14641319 -238615264 - L2 LINE L2 -38 3234 3148 231 342 25 8 chr2 14641466 14641586 -238614997 - MLT1L LTR MaLR -2 613 492 477 0 0 0 chr2 14641820 14641873 -238614710 + (TGGA)n Simple_repeat Simple_repeat 4 56 0 246 284 168 0 chr2 14642791 14642886 -238613697 - MIR3 SINE MIR -12 196 86 391 293 5 7 chr2 14643369 14644058 -238612525 + (CA)n Simple_repeat Simple_repeat 1 687 0 540 322 0 0 chr2 14644109 14644624 -238611959 + (CA)n Simple_repeat Simple_repeat 1 515 0 530 282 0 6 chr2 14644649 14644830 -238611753 + (CA)n Simple_repeat Simple_repeat 1 180 0 435 247 121 24 chr2 14645301 14645467 -238611116 - MIR SINE MIR -13 249 68 1134 8 0 0 chr2 14645524 14645645 -238610938 - L1PA3 LINE L1 0 6155 6035 4451 16 0 0 chr2 14645645 14646140 -238610443 + L1PA3 LINE L1 5474 5968 -187 233 281 0 18 chr2 14646157 14646214 -238610369 - L2 LINE L2 -230 3042 2987 220 338 14 29 chr2 14646655 14646794 -238609789 + L2 LINE L2 2599 2735 -579 369 310 44 9 chr2 14647845 14647958 -238608625 - L2 LINE L2 -17 3296 3180 203 225 225 50 chr2 14648358 14648397 -238608186 - MIR SINE MIR -109 153 122 261 0 0 0 chr2 14648397 14648426 -238608157 + (GA)n Simple_repeat Simple_repeat 2 30 0 203 225 225 50 chr2 14648426 14648466 -238608117 - MIR SINE MIR -140 122 60 184 303 78 49 chr2 14648745 14648887 -238607696 + MIR SINE MIR 111 256 -6 214 290 43 14 chr2 14648911 14648980 -238607603 - MIR SINE MIR -68 140 70 311 299 0 0 chr2 14649370 14649437 -238607146 - L2 LINE L2 -16 3256 3190 180 384 60 20 chr2 14649440 14649591 -238606992 + L2 LINE L2 3092 3248 -24 439 280 60 33 chr2 14649850 14650032 -238606551 - MIR SINE MIR -29 233 47 654 243 161 23 chr2 14650236 14650454 -238606129 + MIR SINE MIR 4 251 -11 437 308 48 7 chr2 14650463 14650609 -238605974 - MIR SINE MIR -26 236 85 983 235 145 0 chr2 14651327 14651616 -238604967 - L1ME1 LINE L1 -1 6165 5835 208 300 138 23 chr2 14651618 14651748 -238604835 - MER5B DNA MER1_type 0 178 34 6522 158 38 0 chr2 14651748 14653000 -238603583 + L1MC1 LINE L1 5043 6331 -2 503 289 56 6 chr2 14653052 14653253 -238603330 - MIR SINE MIR -46 216 8 1426 134 0 18 chr2 14653840 14654063 -238602520 - L1PB1 LINE L1 -191 5960 5742 1689 205 51 56 chr2 14654529 14654997 -238601586 - MLT1C LTR MaLR 0 467 2 363 291 27 9 chr2 14655883 14655993 -238600590 + L2 LINE L2 2677 2788 -526 438 200 50 0 chr2 14656214 14656294 -238600289 + MER96 DNA MER1_type? 1 84 -91 296 220 0 0 chr2 14656289 14656348 -238600235 - MER96 DNA MER1_type? -114 61 3 * 247 327 27 18 chr2 14656628 14656738 -238599845 - L2 LINE L2 -227 3045 2935 504 123 37 18 chr2 14657696 14657859 -238598724 + (TA)n Simple_repeat Simple_repeat 1 166 0 24 53 0 0 chr2 14657867 14657905 -238598678 + AT_rich Low_complexity Low_complexity 1 38 0 243 157 52 179 chr2 14657965 14658099 -238598484 - MER112 DNA MER1_type -7 253 137 288 0 0 0 chr2 14658129 14658161 -238598422 + (TG)n Simple_repeat Simple_repeat 1 32 0 343 311 92 32 chr2 14658250 14658436 -238598147 + MIR SINE MIR 2 197 -63 529 264 67 11 chr2 14658438 14658616 -238597967 + MIR SINE MIR 9 196 -66 210 233 128 83 chr2 14659316 14659449 -238597134 - MER5A DNA MER1_type -6 183 45 191 230 44 115 chr2 14659493 14659606 -238596977 + MIR SINE MIR 95 199 -63 442 216 193 0 chr2 14660695 14660847 -238595736 - MER5A DNA MER1_type 0 189 4 450 253 53 47 chr2 14660868 14661038 -238595545 + MER5B DNA MER1_type 1 171 -7 340 291 127 6 chr2 14661585 14661750 -238594833 + MIR3 SINE MIR 3 187 -21 414 245 41 24 chr2 14661901 14662104 -238594479 + MLT1J LTR MaLR 11 282 -331 2177 124 0 0 chr2 14662452 14662758 -238593825 + AluSx SINE Alu 1 306 -6 262 286 190 47 chr2 14664598 14664940 -238591643 + L2 LINE L2 2586 2976 -338 287 294 116 20 chr2 14665063 14665209 -238591374 + MIR SINE MIR 47 206 -56 1119 111 28 17 chr2 14665346 14665526 -238591057 - L1PA16 LINE L1 -5 6161 5980 263 378 25 34 chr2 14666073 14666192 -238590391 + L2 LINE L2 3150 3267 -5 180 374 55 22 chr2 14666298 14666389 -238590194 - MIR SINE MIR -133 129 36 265 330 9 0 chr2 14669143 14669258 -238587325 + (CATATA)n Simple_repeat Simple_repeat 2 117 0 27 0 0 0 chr2 14670887 14670914 -238585669 + AT_rich Low_complexity Low_complexity 1 27 0 210 313 67 15 chr2 14670964 14671098 -238585485 - L2 LINE L2 -1277 2037 1897 422 299 92 33 chr2 14671221 14671492 -238585091 - MLT1I LTR MaLR 0 409 123 194 356 114 23 chr2 14671561 14671693 -238584890 + L2 LINE L2 3117 3260 -12 209 294 174 22 chr2 14671994 14672086 -238584497 - MIR3 SINE MIR -8 200 95 21 0 0 0 chr2 14672318 14672339 -238584244 + AT_rich Low_complexity Low_complexity 1 21 0 406 290 26 52 chr2 14672661 14672816 -238583767 - MIR3 SINE MIR -49 159 9 254 306 82 0 chr2 14673390 14673488 -238583095 + MIR SINE MIR 47 152 -110 23 0 0 0 chr2 14674258 14674281 -238582302 + AT_rich Low_complexity Low_complexity 1 23 0 2181 112 0 0 chr2 14674281 14674566 -238582017 - AluSx SINE Alu -27 285 1 22 35 0 0 chr2 14674840 14674869 -238581714 + AT_rich Low_complexity Low_complexity 1 29 0 215 179 36 54 chr2 14674943 14674999 -238581584 - MIR3 SINE MIR -48 160 106 618 264 75 38 chr2 14675073 14675285 -238581298 - MIR SINE MIR -14 248 29 891 279 154 13 chr2 14676430 14677067 -238579516 + L2 LINE L2 2574 3313 0 236 278 100 0 chr2 14677300 14677390 -238579193 + MIR SINE MIR 76 174 -88 207 271 0 17 chr2 14678109 14678168 -238578415 + GA-rich Low_complexity Low_complexity 3 60 0 5576 108 2 1 chr2 14679467 14680319 -238576264 + L1PA13 LINE L1 5310 6162 -1 3132 31 5 8 chr2 14680517 14680904 -238575679 - L1PA3 LINE L1 -5 6150 5765 41986 38 2 3 chr2 14681004 14686943 -238569640 - L1PA3 LINE L1 -218 5937 9 294 326 152 30 chr2 14687222 14687354 -238569229 + L2 LINE L2 3125 3272 0 399 272 253 20 chr2 14687458 14687660 -238568923 - MIR SINE MIR -11 251 3 401 277 35 21 chr2 14687661 14687802 -238568781 + MIR3 SINE MIR 61 203 -5 2089 106 0 88 chr2 14688115 14688309 -238568274 - AluSp SINE Alu -11 302 147 2375 100 3 0 chr2 14688309 14688620 -238567963 - AluSp SINE Alu -1 312 1 2089 106 0 88 chr2 14688620 14688756 -238567827 - AluSp SINE Alu -166 147 1 1977 131 0 7 chr2 14688987 14689310 -238567273 + AluSg SINE Alu 1 321 0 376 230 0 0 chr2 14689359 14689433 -238567150 + L1MDb LINE L1 481 554 -5855 761 206 5 42 chr2 14689483 14689672 -238566911 + L1MDb LINE L1 653 834 -5575 1731 229 32 8 chr2 14689678 14690080 -238566503 - MER47B DNA MER2_type 0 418 7 1020 148 0 51 chr2 14690119 14690335 -238566248 + L1MDb LINE L1 871 1075 -5334 1067 188 54 122 chr2 14690335 14690753 -238565830 + MLT1B LTR MaLR 1 457 0 1892 234 95 33 chr2 14690753 14691581 -238565002 + L1MDb LINE L1 1048 1927 -4479 310 164 327 9 chr2 14691658 14691768 -238564815 + MER4C LTR ERV1 302 446 -19 24 32 0 0 chr2 14693642 14693673 -238562910 + AT_rich Low_complexity Low_complexity 1 31 0 2962 221 66 48 chr2 14693677 14694727 -238561856 - L1ME1 LINE L1 -5 6230 5128 685 198 8 143 chr2 14694727 14694979 -238561604 - MER20 DNA MER1_type -1 218 1 2962 221 66 48 chr2 14694979 14695668 -238560915 - L1ME1 LINE L1 -1107 5128 4453 914 238 135 76 chr2 14695668 14695946 -238560637 + LTR28 LTR ERV1 1 261 -1494 1616 58 4 86 chr2 14695946 14696203 -238560380 + AluY SINE Alu 73 308 -3 914 238 135 76 chr2 14696203 14696944 -238559639 + LTR28 LTR ERV1 261 1742 -13 4557 265 52 25 chr2 14696960 14699262 -238557321 - L1ME1 LINE L1 -1767 4448 2091 1846 121 91 26 chr2 14699262 14699601 -238556982 + THE1B LTR MaLR 2 362 -2 4557 265 52 25 chr2 14699601 14700140 -238556443 - L1ME1 LINE L1 -4124 2091 1568 219 88 0 0 chr2 14700293 14700327 -238556256 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 1057 227 122 29 chr2 14700330 14700886 -238555697 - L1ME1 LINE L1 -5096 1300 693 * 5896 25 0 1 chr2 14700881 14701625 -238554958 - L1P LINE L1 -770 5376 4634 4471 14 4 0 chr2 14701625 14702133 -238554450 + L1PA2 LINE L1 5642 6155 0 1698 266 65 21 chr2 14702145 14702706 -238553877 - L1ME1 LINE L1 -5693 703 110 2207 117 0 7 chr2 14702706 14703030 -238553553 - AluSx SINE Alu 0 312 1 1698 266 65 21 chr2 14703030 14703095 -238553488 - L1ME1 LINE L1 -6286 110 49 2824 220 27 10 chr2 14703128 14703754 -238552829 - MER82 DNA MER2_type -15 638 2 300 310 54 16 chr2 14704088 14704217 -238552366 - L2 LINE L2 -1 3271 3138 328 304 30 129 chr2 14704377 14704742 -238551841 - L2 LINE L2 -411 2903 2575 214 354 97 65 chr2 14704771 14705079 -238551504 + L2 LINE L2 2869 3186 -86 999 140 43 38 chr2 14705128 14705314 -238551269 - MER5A DNA MER1_type 0 189 3 207 255 0 0 chr2 14705396 14705443 -238551140 + (TG)n Simple_repeat Simple_repeat 2 48 0 381 22 0 0 chr2 14706521 14706567 -238550016 + (TG)n Simple_repeat Simple_repeat 2 47 0 198 338 189 25 chr2 14706774 14706975 -238549608 + MIR SINE MIR 9 242 -20 180 77 0 0 chr2 14706983 14707009 -238549574 + (TC)n Simple_repeat Simple_repeat 1 26 0 342 227 91 65 chr2 14707212 14707366 -238549217 - MIR SINE MIR -71 191 34 2077 111 88 20 chr2 14707422 14707763 -238548820 + THE1B LTR MaLR 1 364 0 9778 112 7 11 chr2 14707763 14709240 -238547343 + THE1B-int LTR MaLR 1 1483 -97 435 119 0 24 chr2 14709340 14709424 -238547159 + THE1B-int LTR MaLR 1499 1580 0 2385 106 66 23 chr2 14709424 14709773 -238546810 + THE1B LTR MaLR 1 364 0 378 285 124 27 chr2 14709777 14709963 -238546620 + MIR SINE MIR 46 249 -13 1807 177 0 7 chr2 14710296 14710595 -238545988 + AluJo SINE Alu 1 297 -15 822 253 109 30 chr2 14710621 14710823 -238545760 + MER20 DNA MER1_type 1 218 -1 186 333 8 34 chr2 14710848 14710965 -238545618 - L2 LINE L2 -649 2665 2552 425 310 58 35 chr2 14711265 14711436 -238545147 - MLT1G1 LTR MaLR -206 389 215 2279 127 116 10 chr2 14711959 14712346 -238544237 + MSTA LTR MaLR 1 428 0 8789 149 26 52 chr2 14712348 14713963 -238542620 + MSTA-int LTR MaLR 3 1575 -5 2120 176 99 8 chr2 14713965 14714357 -238542226 + MSTA LTR MaLR 1 428 0 551 326 126 39 chr2 14714719 14715329 -238541254 + L2 LINE L2 2137 2799 -515 2349 150 12 0 chr2 14715329 14715662 -238540921 + MER1B DNA MER1_type 1 337 0 241 376 50 21 chr2 14716586 14716727 -238539856 + L2 LINE L2 3123 3267 -5 337 378 11 32 chr2 14716972 14717160 -238539423 + MIR3 SINE MIR 18 201 -7 375 322 72 5 chr2 14717535 14717720 -238538863 - MIR SINE MIR -56 206 6 747 284 33 69 chr2 14718038 14718401 -238538182 + L2 LINE L2 2918 3267 -5 6452 102 4 5 chr2 14718833 14719841 -238536742 + L1MA1 LINE L1 5146 6152 -150 2390 65 16 0 chr2 14720085 14720391 -238536192 - AluY SINE Alu 0 311 1 2057 110 0 69 chr2 14720897 14721216 -238535367 + AluSg SINE Alu 1 297 -13 199 235 47 82 chr2 14721724 14721809 -238534774 - MIR3 SINE MIR -43 165 84 227 324 42 0 chr2 14722136 14722207 -238534376 - MIR SINE MIR -188 74 1 337 324 14 40 chr2 14722573 14722721 -238533862 - MIR3 SINE MIR -23 185 42 286 328 41 33 chr2 14723280 14723402 -238533181 - MIR SINE MIR -116 146 24 428 262 200 0 chr2 14723691 14723836 -238532747 + MER5A DNA MER1_type 6 179 -10 260 374 58 66 chr2 14724737 14725114 -238531469 - L2 LINE L2 0 3272 2899 421 156 2 39 chr2 14725198 14725293 -238531290 + MLT1F1 LTR MaLR 465 567 0 * 503 185 44 67 chr2 14725293 14725427 -238531156 + MER69 DNA AcHobo 15 145 -2381 456 160 11 0 chr2 14725426 14725520 -238531063 + MER69 DNA AcHobo 2336 2430 -96 * 483 185 0 0 chr2 14726621 14726702 -238529881 - L1MB1 LINE L1 -609 5725 5645 2393 166 48 0 chr2 14726702 14727118 -238529465 + L1MB1 LINE L1 5733 6168 0 847 308 71 33 chr2 14727221 14728019 -238528564 - L2 LINE L2 0 3313 2438 246 333 13 0 chr2 14729014 14729092 -238527491 + MER5B DNA MER1_type 3 81 -97 612 271 117 88 chr2 14729093 14729650 -238526933 - MLT1L LTR MaLR -2 613 41 223 207 72 176 chr2 14729861 14729992 -238526591 - MER91A DNA MER1_type -22 174 68 881 233 111 0 chr2 14729992 14730181 -238526402 + MER63A DNA MER1_type 1 210 0 223 207 72 176 chr2 14730181 14730242 -238526341 - MER91A DNA MER1_type -128 68 2 21 0 0 0 chr2 14730516 14730537 -238526046 + AT_rich Low_complexity Low_complexity 1 21 0 483 400 4 16 chr2 14730803 14731058 -238525525 + MIR SINE MIR 3 254 -8 259 182 26 26 chr2 14731430 14731507 -238525076 + (TTTG)n Simple_repeat Simple_repeat 2 78 0 497 197 76 4 chr2 14731917 14732079 -238524504 - MER20 DNA MER1_type -1 218 1 289 314 76 0 chr2 14732085 14732190 -238524393 - MIR SINE MIR -84 178 66 295 229 144 78 chr2 14732545 14732698 -238523885 + MIR SINE MIR 87 249 -13 462 298 62 31 chr2 14732854 14733015 -238523568 + MIR3 SINE MIR 19 184 -24 13947 23 9 1 chr2 14734350 14735981 -238520602 + L1PA2 LINE L1 3402 5044 -1102 4469 13 0 0 chr2 14736081 14736555 -238520028 + L1PA2 LINE L1 5675 6148 -7 1018 190 34 23 chr2 14736565 14736828 -238519755 + L1M1 LINE L1 2897 3162 -2984 * 12249 179 32 60 chr2 14736823 14738546 -238518037 + L1MA3 LINE L1 10 1638 -5927 222 37 0 0 chr2 14738546 14738573 -238518010 + (GA)n Simple_repeat Simple_repeat 2 28 0 12249 179 32 60 chr2 14738573 14739450 -238517133 + L1MA3 LINE L1 1638 2538 -5027 6841 142 22 12 chr2 14739440 14741574 -238515009 + L1MA3 LINE L1 5575 7724 0 * 5756 156 34 25 chr2 14741558 14742826 -238513757 + L1M1 LINE L1 4253 5540 -743 * 727 217 12 37 chr2 14742934 14743094 -238513489 + MIR SINE MIR 42 198 -64 2135 185 6 0 chr2 14743094 14743440 -238513143 - MER7A DNA MER2_type 0 346 1 727 217 12 37 chr2 14743440 14743478 -238513105 + MIR SINE MIR 198 235 -27 228 67 0 0 chr2 14743893 14743923 -238512660 + (A)n Simple_repeat Simple_repeat 1 30 0 253 160 40 0 chr2 14744314 14744364 -238512219 - L2 LINE L2 0 3313 3262 398 384 33 33 chr2 14744581 14744977 -238511606 - L2 LINE L2 -366 2948 2553 2512 198 42 14 chr2 14745021 14745099 -238511484 - LTR53 LTR ERVL 0 519 445 2261 108 68 34 chr2 14745099 14745451 -238511132 - THE1B LTR MaLR 0 364 1 2512 198 42 14 chr2 14745451 14745871 -238510712 - LTR53 LTR ERVL -74 445 7 326 162 15 29 chr2 14746165 14746233 -238510350 + MLT1H LTR MaLR 483 549 0 3438 184 4 25 chr2 14746454 14747139 -238509444 + L1MA4 LINE L1 5629 6299 -1 1994 113 73 0 chr2 14748280 14748554 -238508029 - AluSg SINE Alu -16 294 1 427 303 45 86 chr2 14748601 14748845 -238507738 + MIR SINE MIR 23 256 -6 590 290 105 13 chr2 14748860 14749098 -238507485 - MLT1J2 LTR MaLR -2 448 189 240 163 75 88 chr2 14749317 14749358 -238507225 - LTR40b LTR ERVL -311 151 110 1484 196 53 94 chr2 14749358 14749827 -238506756 - LTR7 LTR ERV1 0 450 1 240 163 75 88 chr2 14749827 14749865 -238506718 - LTR40b LTR ERVL -352 110 73 265 304 38 87 chr2 14749882 14750066 -238506517 - MIR3 SINE MIR -12 196 22 2324 109 0 13 chr2 14750174 14750487 -238506096 + AluSg SINE Alu 1 309 -1 292 275 50 55 chr2 14750599 14750781 -238505802 + MIR SINE MIR 53 233 -29 855 278 25 16 chr2 14750795 14751040 -238505543 + MIR SINE MIR 16 262 0 273 256 0 45 chr2 14751246 14751328 -238505255 + MIR SINE MIR 73 150 -58 251 284 257 0 chr2 14751966 14752114 -238504469 - MER5A DNA MER1_type 0 189 4 4409 168 37 41 chr2 14752469 14752758 -238503825 - L1MB3 LINE L1 -2 6181 5893 1935 169 11 101 chr2 14752758 14753213 -238503370 + MLT2D LTR ERVL 1 414 0 4409 168 37 41 chr2 14753213 14753832 -238502751 - L1MB3 LINE L1 -290 5893 5276 226 345 86 7 chr2 14755021 14755160 -238501423 - MER5A DNA MER1_type -39 150 1 2220 96 3 0 chr2 14755279 14755582 -238501001 - AluSx SINE Alu 0 304 1 2002 153 172 3 chr2 14755719 14756085 -238500498 + MSTA LTR MaLR 1 428 0 208 270 157 82 chr2 14758010 14758042 -238498541 - MIR SINE MIR -72 190 162 186 43 0 0 chr2 14758042 14758065 -238498518 + (TTA)n Simple_repeat Simple_repeat 2 24 0 208 270 157 82 chr2 14758065 14758191 -238498392 - MIR SINE MIR -100 162 20 192 382 44 22 chr2 14758752 14758888 -238497695 - MIR3 SINE MIR -63 145 7 377 346 47 16 chr2 14760273 14760474 -238496109 - MIR SINE MIR -14 248 4 559 312 40 24 chr2 14761484 14761731 -238494852 + LTR16C LTR ERVL 146 396 -95 2596 270 42 54 chr2 14762182 14763470 -238493113 + L1MEc LINE L1 18 1289 -5107 1328 222 122 57 chr2 14763584 14764654 -238491929 + L1MEc LINE L1 1623 2761 -3454 369 121 0 30 chr2 14764666 14764732 -238491851 - AluSg/x SINE Alu -77 223 160 768 143 29 58 chr2 14764732 14764898 -238491685 - LTR12 LTR ERV1 -108 606 379 4140 121 56 44 chr2 14764899 14765575 -238491008 - LTR12 LTR ERV1 -4 684 1 293 171 0 0 chr2 14765577 14765618 -238490965 - AluSg/x SINE Alu -128 174 134 807 170 0 15 chr2 14765618 14765753 -238490830 - AluJo/FLAM SINE Alu -169 133 1 1965 236 163 70 chr2 14765753 14766581 -238490002 + L1MEc LINE L1 2745 3495 -2720 2370 69 0 50 chr2 14766581 14766899 -238489684 + AluY SINE Alu 1 302 -9 1965 236 163 70 chr2 14766899 14767576 -238489007 + L1MEc LINE L1 3495 4408 -1807 2097 113 10 3 chr2 14767576 14767868 -238488715 + AluSg SINE Alu 1 294 -16 1965 236 163 70 chr2 14767868 14767953 -238488630 + L1MEc LINE L1 4408 4484 -1731 1812 279 64 61 chr2 14767973 14768797 -238487786 - HERV16 LTR ERVL -2318 2678 1852 2832 325 98 14 chr2 14769014 14770419 -238486164 - HERV16 LTR ERVL -3471 1525 2 819 331 43 12 chr2 14770419 14770818 -238485765 - LTR16A LTR ERVL -18 432 22 502 128 73 64 chr2 14770859 14770968 -238485615 - L1MC1 LINE L1 0 6333 6224 3408 151 13 4 chr2 14771076 14771631 -238484952 - L1MC1 LINE L1 -100 6233 5674 477 293 100 71 chr2 14772936 14773405 -238483178 + HAL1b LINE L1 14 505 -843 2346 180 6 53 chr2 14773405 14773877 -238482706 + L1PA16 LINE L1 5716 6165 -1 477 293 100 71 chr2 14773877 14773995 -238482588 + HAL1b LINE L1 505 618 -730 1034 205 83 5 chr2 14773996 14774201 -238482382 + MER58A DNA MER1_type 3 223 -1 200 304 0 0 chr2 14775917 14775963 -238480620 + MIR SINE MIR 31 76 -132 1457 170 38 42 chr2 14776051 14776353 -238480230 + AluJb SINE Alu 19 319 0 1998 297 123 27 chr2 14776923 14778395 -238478188 - L2 LINE L2 0 3313 1716 187 339 145 38 chr2 14778532 14778924 -238477659 + L2 LINE L2 2804 3237 -35 2198 112 14 0 chr2 14779466 14779760 -238476823 + AluSx SINE Alu 1 298 -14 2181 116 0 0 chr2 14780549 14780857 -238475726 - AluSx SINE Alu 0 308 1 462 214 22 0 chr2 14781061 14781150 -238475433 - ORSL DNA AcHobo -184 91 1 2131 116 0 23 chr2 14782962 14783290 -238473293 + AluSq SINE Alu 1 313 0 310 310 58 39 chr2 14783955 14784110 -238472473 - MIR SINE MIR -41 221 64 201 295 90 66 chr2 14784325 14784447 -238472136 + MIR SINE MIR 19 143 -65 275 324 56 56 chr2 14785224 14785799 -238470784 - L1M4 LINE L1 -2169 3977 3403 288 247 87 33 chr2 14785840 14786172 -238470411 - L1M4 LINE L1 -2835 3311 2962 466 360 7 7 chr2 14786209 14786362 -238470221 + LTR33 LTR ERVL 28 180 -341 567 219 171 6 chr2 14786476 14786640 -238469943 + LTR33 LTR ERVL 331 521 0 1937 229 71 86 chr2 14786773 14787421 -238469162 + HAL1 LINE L1 1639 2272 -235 2239 95 7 3 chr2 14787421 14787716 -238468867 + AluSc SINE Alu 1 296 -13 1937 229 71 86 chr2 14787716 14787944 -238468639 + HAL1 LINE L1 2272 2502 -5 597 167 68 73 chr2 14787958 14788101 -238468482 + L1 LINE L1 5028 5171 -975 2393 61 0 7 chr2 14788101 14788397 -238468186 + AluY SINE Alu 1 294 -17 597 167 68 73 chr2 14788397 14788445 -238468138 + L1 LINE L1 5171 5218 -928 * 948 247 5 5 chr2 14788433 14788656 -238467927 + L1PB4 LINE L1 5934 6156 0 497 228 15 44 chr2 14789720 14789856 -238466727 - MIR SINE MIR -61 147 16 249 324 104 39 chr2 14790801 14790983 -238465600 + MIR SINE MIR 32 225 -37 1920 147 8 62 chr2 14791248 14791616 -238464967 + THE1A LTR MaLR 1 348 -7 542 257 96 38 chr2 14791706 14792006 -238464577 - MLT1H1 LTR MaLR -129 420 63 193 245 19 38 chr2 14793852 14793905 -238462678 + L2 LINE L2 3188 3239 -33 * 292 225 0 28 chr2 14793901 14793972 -238462611 - MIR SINE MIR 0 262 194 2012 153 0 0 chr2 14794884 14795185 -238461398 - AluSx SINE Alu -11 301 1 1070 217 18 32 chr2 14796354 14796724 -238459859 - MLT2B3 LTR ERVL 0 554 193 196 295 39 26 chr2 14796912 14796990 -238459593 - MIR SINE MIR -17 245 167 2404 58 7 0 chr2 14796990 14797281 -238459302 + AluY SINE Alu 1 293 -18 977 173 40 4 chr2 14797301 14797499 -238459084 - MLT2B3 LTR ERVL -320 200 2 225 184 0 0 chr2 14797528 14797566 -238459017 + L2 LINE L2 3235 3272 0 226 317 73 0 chr2 14798219 14798301 -238458282 + L2 LINE L2 3159 3246 -26 360 218 0 0 chr2 14798312 14798399 -238458184 + (CAG)n Simple_repeat Simple_repeat 2 88 0 395 231 109 101 chr2 14798411 14798649 -238457934 - MIR SINE MIR -3 259 20 221 308 243 0 chr2 14800021 14800128 -238456455 + MIR3 SINE MIR 30 162 -46 617 210 32 0 chr2 14800163 14800287 -238456296 + MER5A DNA MER1_type 1 128 -61 2409 78 7 0 chr2 14800300 14800607 -238455976 + AluY SINE Alu 1 309 -2 195 274 0 0 chr2 14801059 14801110 -238455473 - L3 LINE CR1 -3 1574 1524 * 419 319 42 18 chr2 14801101 14801267 -238455316 - MER5B DNA MER1_type -7 171 2 2351 62 41 0 chr2 14801267 14801558 -238455025 + AluY SINE Alu 1 303 -8 207 0 0 0 chr2 14801583 14801606 -238454977 + (A)n Simple_repeat Simple_repeat 1 23 0 207 291 76 13 chr2 14802466 14802545 -238454038 - MIR SINE MIR -131 131 48 181 286 130 13 chr2 14802559 14802636 -238453947 + MIR3 SINE MIR 112 197 -11 247 307 229 7 chr2 14803715 14803868 -238452715 + MIR SINE MIR 2 188 -74 472 164 0 14 chr2 14804091 14804164 -238452419 - AluS SINE Alu -237 73 2 1298 136 9 33 chr2 14804165 14804378 -238452205 + THE1B LTR MaLR 157 364 0 203 269 103 0 chr2 14804378 14804456 -238452127 + MIR SINE MIR 104 189 -73 380 318 20 26 chr2 14804475 14804626 -238451957 + MIR3 SINE MIR 48 197 -11 2106 242 115 13 chr2 14805379 14805917 -238450666 - MLT1E LTR MaLR 0 593 1 284 299 134 0 chr2 14806504 14806601 -238449982 - L2 LINE L2 -1 3312 3203 321 356 29 11 chr2 14806965 14807139 -238449444 - L2 LINE L2 -541 2773 2597 11851 132 13 8 chr2 14807460 14809276 -238447307 - Tigger1 DNA MER2_type -7 2411 586 3379 141 28 6 chr2 14809563 14810101 -238446482 - Tigger1 DNA MER2_type -1797 621 72 266 338 0 0 chr2 14810838 14810906 -238445677 + MIR3 SINE MIR 93 160 -48 708 265 37 0 chr2 14810993 14811182 -238445401 - MLT1B LTR MaLR -7 383 188 951 118 59 18 chr2 14811323 14811492 -238445091 - MLT1B LTR MaLR -214 176 1 2405 77 0 0 chr2 14811628 14811925 -238444658 + AluY SINE Alu 1 297 -14 245 155 17 0 chr2 14811927 14811985 -238444598 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 298 368 32 0 chr2 14812201 14812326 -238444257 - L2 LINE L2 -2 3270 3142 375 321 51 51 chr2 14814876 14815113 -238441470 - L2 LINE L2 -836 2478 2242 1144 297 136 25 chr2 14815389 14817065 -238439518 - L1ME3 LINE L1 -225 5920 4037 419 313 61 4 chr2 14817200 14817462 -238439121 - L1ME3 LINE L1 -2452 3677 3401 25 31 0 0 chr2 14817551 14817583 -238439000 + AT_rich Low_complexity Low_complexity 1 32 0 336 236 46 52 chr2 14817645 14817819 -238438764 - L1ME3 LINE L1 -4641 1669 1497 802 343 78 35 chr2 14817837 14818620 -238437963 - L1ME3 LINE L1 -4866 1253 511 8066 201 26 16 chr2 14818855 14823288 -238433295 + L1M3f LINE L1 3 4476 -1852 * 19792 161 31 14 chr2 14823287 14823364 -238433219 + L1M1 LINE L1 15 89 -7476 249 57 0 0 chr2 14823364 14823399 -238433184 + (CA)n Simple_repeat Simple_repeat 2 36 0 19792 161 31 14 chr2 14823399 14826918 -238429665 + L1M1 LINE L1 89 3693 -3872 2443 92 0 0 chr2 14826918 14827222 -238429361 + AluY SINE Alu 1 304 -7 19792 161 31 14 chr2 14827222 14827879 -238428704 + L1M1 LINE L1 3693 4338 -3227 24541 42 42 3 chr2 14827881 14831155 -238425428 + L1P LINE L1 1 3399 -2747 241 230 194 71 chr2 14831760 14831888 -238424695 - MIR SINE MIR -60 148 17 193 344 56 0 chr2 14831870 14831960 -238424623 - MIR3 SINE MIR -45 163 69 * 532 315 25 49 chr2 14832382 14832585 -238423998 - MIR3 SINE MIR -5 203 6 388 288 38 76 chr2 14833621 14833805 -238422778 - HAL1b LINE L1 -418 930 754 608 318 44 27 chr2 14833977 14834502 -238422081 - HAL1 LINE L1 -739 1768 1235 379 235 160 45 chr2 14836594 14836632 -238419951 + MIR SINE MIR 40 72 -190 2344 186 36 36 chr2 14836632 14837104 -238419479 - MER70A LTR ERVL 0 472 1 379 235 160 45 chr2 14837104 14837193 -238419390 + MIR SINE MIR 72 149 -113 2161 110 10 7 chr2 14837193 14837494 -238419089 + AluSg SINE Alu 1 302 -8 379 235 160 45 chr2 14837494 14837565 -238419018 + MIR SINE MIR 149 262 0 231 349 125 20 chr2 14837688 14837840 -238418743 - MIR SINE MIR -70 192 25 232 290 43 0 chr2 14838772 14838841 -238417742 - MIR SINE MIR -168 94 23 1119 145 126 5 chr2 14839624 14839838 -238416745 + MSTA LTR MaLR 136 375 -53 493 329 79 22 chr2 14839853 14840130 -238416453 - L3 LINE CR1 -220 1357 1065 295 272 19 39 chr2 14840329 14840432 -238416151 - L2 LINE L2 -30 3283 3183 321 300 40 0 chr2 14841394 14841494 -238415089 - MIR3 SINE MIR -40 168 65 2678 141 26 5 chr2 14841570 14841989 -238414594 + MSTA LTR MaLR 1 428 0 340 330 85 0 chr2 14842976 14843082 -238413501 - MIR SINE MIR -61 147 33 21 0 0 0 chr2 14843123 14843144 -238413439 + AT_rich Low_complexity Low_complexity 1 21 0 2531 39 0 16 chr2 14843363 14843675 -238412908 + AluY SINE Alu 2 308 -3 303 316 96 0 chr2 14843691 14843875 -238412708 - MIR SINE MIR -25 237 32 5906 187 40 19 chr2 14843915 14845141 -238411442 + L1MA4 LINE L1 1 1263 -4402 1998 130 32 0 chr2 14845141 14845418 -238411165 + AluSx SINE Alu 1 286 -26 5906 187 40 19 chr2 14845418 14845755 -238410828 + L1MA4 LINE L1 1263 1592 -4073 7396 220 45 57 chr2 14845758 14848874 -238407709 + L1MA4 LINE L1 2544 5618 -743 2291 152 2 73 chr2 14848872 14849364 -238407219 + L1MA4 LINE L1 5848 6304 -178 * 2318 127 0 3 chr2 14849376 14849723 -238406860 - L1PB1 LINE L1 -17 6134 5789 694 186 45 0 chr2 14849723 14849897 -238406686 + L1MA4 LINE L1 6295 6479 -3 308 326 51 7 chr2 14850992 14851130 -238405453 - MIR SINE MIR 0 262 119 236 327 118 68 chr2 14852107 14852505 -238404078 - L2 LINE L2 -1 3271 2854 2492 111 16 8 chr2 14853866 14854235 -238402348 - THE1C LTR MaLR 0 375 4 9201 127 38 44 chr2 14854238 14855827 -238400756 - THE1C-int LTR MaLR 0 1580 1 2489 112 11 11 chr2 14855827 14856202 -238400381 - THE1C LTR MaLR 0 375 1 1222 174 24 96 chr2 14856202 14856535 -238400048 + MLT1B LTR MaLR 6 314 -76 288 0 0 0 chr2 14856619 14856651 -238399932 + (TG)n Simple_repeat Simple_repeat 2 33 0 266 340 10 10 chr2 14857213 14857313 -238399270 - MIR SINE MIR -131 131 32 428 295 115 16 chr2 14857543 14857726 -238398857 + MIR3 SINE MIR 3 203 -5 343 285 16 32 chr2 14858416 14858539 -238398044 + MIR SINE MIR 25 145 -63 212 304 38 121 chr2 14858893 14859182 -238397401 + L2 LINE L2 2806 3070 -202 264 274 12 60 chr2 14859667 14859751 -238396832 + L2 LINE L2 3191 3270 -2 * 588 278 7 0 chr2 14859746 14859897 -238396686 - MIR SINE MIR 0 262 111 1885 183 102 10 chr2 14860592 14860985 -238395598 + MSTB1 LTR MaLR 4 432 0 475 214 0 0 chr2 14861007 14861096 -238395487 - MIR SINE MIR -73 189 101 1741 141 53 11 chr2 14861131 14861414 -238395169 - AluSx SINE Alu -17 295 1 512 303 75 31 chr2 14861730 14862024 -238394559 + Charlie2 DNA MER1_type 9 315 -2547 2133 142 3 0 chr2 14862327 14862638 -238393945 + AluSx SINE Alu 1 312 0 713 198 30 42 chr2 14862638 14862805 -238393778 + MER58B DNA MER1_type 177 341 0 359 167 0 0 chr2 14862807 14862873 -238393710 + Charlie2 DNA MER1_type 1885 1950 -912 1871 209 12 0 chr2 14862878 14863223 -238393360 + MER68 LTR ERV1 172 520 -42 1940 216 108 21 chr2 14863226 14863809 -238392774 + L1MEc LINE L1 540 1173 -5223 * 3502 256 48 33 chr2 14863805 14865172 -238391411 + L1MEc LINE L1 2478 3864 -2351 1503 239 66 18 chr2 14865178 14865618 -238390965 + MLT1C LTR MaLR 7 467 0 2955 268 88 18 chr2 14865618 14865735 -238390848 + L1MEc LINE L1 3860 3967 -2264 1120 208 39 17 chr2 14865735 14865966 -238390617 + MER8 DNA MER2_type 4 239 0 2955 268 88 18 chr2 14865966 14867171 -238389412 + L1MEc LINE L1 3967 5339 -892 1765 205 54 25 chr2 14867171 14867576 -238389007 + LTR52 LTR ERVL 2 418 -3 2955 268 88 18 chr2 14867576 14867734 -238388849 + L1MEc LINE L1 5339 5485 -746 521 308 0 64 chr2 14867770 14867942 -238388641 - FRAM SINE Alu -15 161 1 3504 199 20 18 chr2 14867944 14868709 -238387874 + L1MB8 LINE L1 5397 6162 -16 2120 105 0 3 chr2 14868711 14869017 -238387566 - AluSx SINE Alu 0 305 1 508 225 0 39 chr2 14869035 14869164 -238387419 + L1M4 LINE L1 4878 5001 -1145 8333 181 24 8 chr2 14869671 14871051 -238385532 - L1P LINE L1 -820 5326 3917 2943 9 0 0 chr2 14871051 14871368 -238385215 + AluYb8 SINE Alu 1 317 -1 8333 181 24 8 chr2 14871368 14871549 -238385034 - L1P LINE L1 -2229 3917 3740 433 281 91 84 chr2 14871629 14872968 -238383615 - L1M4 LINE L1 -1110 5036 3689 230 340 145 31 chr2 14873105 14873264 -238383319 + MER5B DNA MER1_type 1 177 -1 506 316 146 29 chr2 14873349 14873870 -238382713 + L2 LINE L2 2694 3271 -42 224 328 176 0 chr2 14873886 14874005 -238382578 + L2 LINE L2 3174 3313 0 207 260 135 21 chr2 14874571 14874667 -238381916 - MIR SINE MIR -72 136 30 1070 121 153 11 chr2 14875596 14875786 -238380797 - MER20 DNA MER1_type -2 217 1 434 266 40 24 chr2 14876122 14876246 -238380337 + MIR3 SINE MIR 62 187 -21 2847 242 119 104 chr2 14877058 14878391 -238378192 + MLT1A1-int LTR MaLR 5 1357 -14 669 233 7 0 chr2 14878403 14878549 -238378034 + MLT1A1 LTR MaLR 1 147 -218 1378 219 54 3 chr2 14878555 14879029 -238377554 + AluJb SINE Alu 1 489 0 805 115 0 20 chr2 14879051 14879199 -238377384 + (GAAA)n Simple_repeat Simple_repeat 3 147 0 198 103 0 0 chr2 14879200 14879229 -238377354 + (CAAG)n Simple_repeat Simple_repeat 4 32 0 801 167 42 0 chr2 14879276 14879420 -238377163 + MLT1A1 LTR MaLR 216 365 0 866 250 73 88 chr2 14879816 14880128 -238376455 - L1MC4a LINE L1 -1905 5903 5601 5610 87 3 30 chr2 14880128 14880887 -238375696 + L1PA10 LINE L1 5419 6156 -12 866 250 73 88 chr2 14880887 14881106 -238375477 - L1MC4a LINE L1 -2207 5601 5380 226 304 18 0 chr2 14881109 14881165 -238375418 + L2 LINE L2 3201 3257 -15 389 335 57 5 chr2 14881198 14881392 -238375191 - MIR SINE MIR -32 230 27 2369 230 69 84 chr2 14881797 14882101 -238374482 - MER69B DNA AcHobo -1616 910 603 1935 144 7 7 chr2 14882101 14882406 -238374177 - AluSg SINE Alu -5 305 1 2369 230 69 84 chr2 14882406 14882924 -238373659 - MER69B DNA AcHobo -1923 603 100 418 317 21 7 chr2 14883071 14883213 -238373370 + MIR SINE MIR 49 192 -70 321 253 152 10 chr2 14884230 14884329 -238372254 - MIR SINE MIR -69 193 81 189 147 0 0 chr2 14885830 14885864 -238370719 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 747 226 38 85 chr2 14886830 14887065 -238369518 - MER58A DNA MER1_type 0 224 1 223 273 0 0 chr2 14887729 14887773 -238368810 + MIR SINE MIR 38 81 -127 283 296 61 10 chr2 14887924 14888022 -238368561 + L2 LINE L2 3170 3272 0 262 236 47 66 chr2 14888624 14888730 -238367853 + MIR SINE MIR 95 198 -64 235 160 0 60 chr2 14889101 14889151 -238367432 + MIR SINE MIR 126 172 -90 2309 89 0 0 chr2 14889908 14890215 -238366368 + AluSg SINE Alu 1 307 0 2667 103 6 0 chr2 14890744 14891093 -238365490 + L1PA8A LINE L1 5763 6113 -18 207 0 0 0 chr2 14891097 14891120 -238365463 + (TAA)n Simple_repeat Simple_repeat 2 24 0 201 357 28 2 chr2 14891281 14891365 -238365218 - MIR SINE MIR -87 121 37 21 57 0 0 chr2 14892080 14892115 -238364468 + AT_rich Low_complexity Low_complexity 1 35 0 227 306 82 20 chr2 14892566 14892713 -238363870 + L2 LINE L2 2907 3062 -210 214 353 53 30 chr2 14892811 14892944 -238363639 + L2 LINE L2 3118 3253 -19 364 362 14 14 chr2 14893272 14893410 -238363173 - L3 LINE CR1 -7 1570 1433 2314 197 82 37 chr2 14893435 14893998 -238362585 + MLT1E2 LTR MaLR 37 624 -2 520 276 115 0 chr2 14893998 14894190 -238362393 - L3 LINE CR1 -123 1454 1241 422 283 7 14 chr2 14894606 14894744 -238361839 + L1MEc LINE L1 44 180 -6216 428 376 5 9 chr2 14894829 14895039 -238361544 + L1MEc LINE L1 196 404 -5992 1391 234 86 27 chr2 14895243 14895684 -238360899 + MLT1C LTR MaLR 1 467 0 258 283 156 55 chr2 14895688 14895996 -238360587 + L1MEc LINE L1 660 998 -5398 198 373 0 17 chr2 14896140 14896199 -238360384 + MIR SINE MIR 46 103 -159 267 164 104 45 chr2 14896324 14896391 -238360192 + MLT1K LTR MaLR 179 249 -339 361 213 13 0 chr2 14897322 14897397 -238359186 - MIR SINE MIR -69 139 64 489 291 135 13 chr2 14898081 14898311 -238358272 - MIR SINE MIR 0 262 5 1854 283 108 46 chr2 14898887 14900157 -238356426 + HAL1 LINE L1 370 1718 -789 390 276 128 74 chr2 14900220 14900463 -238356120 + MLT1J2 LTR MaLR 37 292 -158 836 237 121 130 chr2 14900547 14901092 -238355491 + MLT1H1 LTR MaLR 3 555 0 363 283 171 42 chr2 14901106 14901579 -238355004 + HAL1 LINE L1 1720 2253 -254 648 296 82 10 chr2 14901697 14901903 -238354680 + MIR SINE MIR 20 240 -22 309 361 42 0 chr2 14902102 14902221 -238354362 + MIR SINE MIR 121 244 -18 279 287 197 28 chr2 14902270 14902524 -238354059 + L3b LINE CR1 1165 1461 -122 188 271 0 17 chr2 14902749 14902808 -238353775 + L3b LINE CR1 1173 1230 -353 27 0 0 0 chr2 14905590 14905617 -238350966 + AT_rich Low_complexity Low_complexity 1 27 0 195 180 20 60 chr2 14906163 14906213 -238350370 - MIR3 SINE MIR -2 206 159 291 54 0 0 chr2 14907958 14907995 -238348588 + (TG)n Simple_repeat Simple_repeat 2 38 0 1731 93 0 24 chr2 14908013 14908261 -238348322 + AluSx SINE Alu 64 305 -7 426 277 204 22 chr2 14908267 14908758 -238347825 + L1ME4a LINE L1 5512 6091 -30 1994 118 0 36 chr2 14908805 14909109 -238347474 + AluSx SINE Alu 1 293 -19 742 181 8 15 chr2 14909305 14909438 -238347145 - FLAM_A SINE Alu -1 132 1 201 149 85 21 chr2 14909850 14909897 -238346686 - MIR SINE MIR -114 94 45 32 0 0 0 chr2 14909929 14909961 -238346622 + AT_rich Low_complexity Low_complexity 1 32 0 628 223 38 13 chr2 14910198 14910355 -238346228 + MER5B DNA MER1_type 4 164 -14 479 157 293 14 chr2 14910360 14910500 -238346083 + MER5A DNA MER1_type 11 189 0 385 281 74 8 chr2 14911069 14911190 -238345393 - MER94 DNA DNA -1 133 5 369 250 73 61 chr2 14911772 14911936 -238344647 - MIR SINE MIR -12 250 85 22 0 0 0 chr2 14912477 14912499 -238344084 + AT_rich Low_complexity Low_complexity 1 22 0 209 338 0 0 chr2 14912533 14912601 -238343982 - L2 LINE L2 -11 3302 3235 200 367 54 34 chr2 14912739 14912886 -238343697 + L2 LINE L2 3123 3272 0 324 252 48 19 chr2 14913630 14913733 -238342850 - MER5A DNA MER1_type -21 168 63 2516 54 0 0 chr2 14913735 14914030 -238342553 - L1PA4 LINE L1 -1 6154 5860 266 59 0 0 chr2 14914030 14914064 -238342519 + L1PA4 LINE L1 5830 5863 -309 702 204 116 0 chr2 14914404 14914551 -238342032 - FAM SINE Alu -10 165 2 465 341 38 19 chr2 14914901 14915112 -238341471 - MIR SINE MIR -7 255 41 1235 136 16 62 chr2 14915766 14916008 -238340575 + L1PA14 LINE L1 5930 6160 -1 1788 186 42 8 chr2 14916146 14916507 -238340076 - L1MA9 LINE L1 -1 6311 5939 2311 135 122 13 chr2 14918047 14918433 -238338150 + MSTA LTR MaLR 1 428 0 195 359 51 26 chr2 14918470 14918587 -238337996 + MIR SINE MIR 34 153 -109 254 353 84 21 chr2 14919500 14919690 -238336893 - MIR SINE MIR -28 234 33 249 139 14 56 chr2 14919928 14920000 -238336583 - LTR66 LTR ERVL -156 454 386 5081 112 207 122 chr2 14920302 14921775 -238334808 - pTR5 LTR ERV1 0 2438 741 400 313 154 8 chr2 14922024 14922264 -238334319 - L2 LINE L2 0 3313 3039 1385 201 7 34 chr2 14923184 14923482 -238333101 - AluJb SINE Alu -21 291 2 1246 180 20 16 chr2 14923793 14924037 -238332546 - L1MB1 LINE L1 -1 6167 5923 224 250 40 26 chr2 14924162 14924238 -238332345 - MIR SINE MIR -95 113 37 414 347 78 4 chr2 14924876 14925121 -238331462 + L1ME LINE L1 5556 5818 -303 447 291 63 13 chr2 14926467 14926625 -238329958 + MIR SINE MIR 20 185 -77 28 0 0 0 chr2 14927478 14927506 -238329077 + AT_rich Low_complexity Low_complexity 1 28 0 315 301 44 64 chr2 14927556 14927749 -238328834 - MIR SINE MIR -60 202 12 351 65 0 0 chr2 14928274 14928320 -238328263 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 384 181 0 0 chr2 14928311 14928394 -238328189 + (TA)n Simple_repeat Simple_repeat 2 84 0 258 325 40 8 chr2 14928453 14928579 -238328004 - LTR40a LTR ERVL -159 360 231 225 296 96 0 chr2 14928765 14928880 -238327703 + LTR68 LTR ERV1 615 740 0 22 0 0 0 chr2 14928966 14928988 -238327595 + AT_rich Low_complexity Low_complexity 1 22 0 260 327 46 33 chr2 14929398 14929551 -238327032 - MIR SINE MIR -96 166 12 15007 194 28 35 chr2 14930092 14931536 -238325047 + L1MA5A LINE L1 1045 2499 -4440 2060 129 3 3 chr2 14931536 14931831 -238324752 - AluSx SINE Alu -17 295 1 15007 194 28 35 chr2 14931831 14932176 -238324407 + L1MA5A LINE L1 2499 2845 -4094 1817 164 7 7 chr2 14932176 14932463 -238324120 + AluSx SINE Alu 1 287 -25 15007 194 28 35 chr2 14932463 14934728 -238321855 + L1MA5A LINE L1 2845 5126 -1813 1977 143 97 32 chr2 14934728 14935070 -238321513 - THE1B LTR MaLR 0 364 1 15007 194 28 35 chr2 14935070 14935522 -238321061 + L1MA5A LINE L1 5126 5580 -1359 1251 102 23 0 chr2 14935522 14935698 -238320885 - L1MA2 LINE L1 0 6304 6125 15007 194 28 35 chr2 14935698 14937112 -238319471 + L1MA5A LINE L1 5580 6937 -2 1665 213 25 17 chr2 14938287 14938649 -238317934 + MLT1A1 LTR MaLR 1 365 0 333 338 66 7 chr2 14938676 14938812 -238317771 - MIR SINE MIR -116 146 3 241 326 103 87 chr2 14939566 14939624 -238316959 - L2 LINE L2 -10 3262 3206 2067 120 0 23 chr2 14939624 14939924 -238316659 + AluSx SINE Alu 1 293 -19 241 326 103 87 chr2 14939924 14940049 -238316534 - L2 LINE L2 -66 3206 3076 194 320 72 52 chr2 14940134 14940231 -238316352 - L2 LINE L2 -202 3070 2972 321 191 58 164 chr2 14940581 14940770 -238315813 - LTR16A LTR ERVL -2 448 280 206 313 152 0 chr2 14940863 14940962 -238315621 + MIR SINE MIR 139 252 -10 480 274 176 49 chr2 14941138 14941507 -238315076 + L2 LINE L2 2291 2706 -608 23 54 0 0 chr2 14941521 14941558 -238315025 + AT_rich Low_complexity Low_complexity 1 37 0 551 292 73 61 chr2 14941806 14942481 -238314102 - L1ME2 LINE L1 -217 5947 5265 4864 118 22 20 chr2 14942633 14943399 -238313184 - L1PA15 LINE L1 0 6165 5398 228 266 242 23 chr2 14944999 14945127 -238311456 - L2 LINE L2 -21 3251 3096 1798 178 22 3 chr2 14945409 14945729 -238310854 - L1M2 LINE L1 -513 5799 5474 332 237 154 19 chr2 14945918 14946074 -238310509 - L1MCc LINE L1 -6223 200 24 24 0 0 0 chr2 14946436 14946460 -238310123 + AT_rich Low_complexity Low_complexity 1 24 0 659 252 73 23 chr2 14947613 14947831 -238308752 + MIR SINE MIR 22 250 -12 269 254 18 55 chr2 14947852 14947962 -238308621 - L2 LINE L2 -7 3306 3201 216 309 114 60 chr2 14948602 14948900 -238307683 - L2 LINE L2 -5 3267 2954 337 336 9 9 chr2 14949821 14949931 -238306652 + MIR SINE MIR 30 139 -69 308 189 14 0 chr2 14950088 14950162 -238306421 + CT-rich Low_complexity Low_complexity 1 75 0 693 223 80 27 chr2 14950184 14950372 -238306211 - MER46C DNA MER2_type -2 336 139 264 271 136 12 chr2 14950540 14950713 -238305870 + MIR SINE MIR 2 192 -68 288 246 0 14 chr2 14950883 14950952 -238305631 + L2 LINE L2 3246 3313 0 448 279 58 41 chr2 14951246 14951418 -238305165 + MIR SINE MIR 14 188 -74 255 378 51 47 chr2 14951679 14951954 -238304629 + L2 LINE L2 2948 3223 -49 544 299 23 73 chr2 14952136 14952397 -238304186 + Charlie2 DNA MER1_type 2 249 -2613 1666 209 67 34 chr2 14952466 14953060 -238303523 + Charlie2 DNA MER1_type 2224 2837 -25 396 241 145 28 chr2 14953173 14953318 -238303265 + MIR3 SINE MIR 17 178 -30 466 296 64 10 chr2 14953956 14954160 -238302423 - MIR SINE MIR -11 251 36 187 300 43 0 chr2 14954166 14954236 -238302347 + MIR SINE MIR 33 105 -103 331 294 119 0 chr2 14954264 14954407 -238302176 - MIR SINE MIR -53 209 50 410 246 79 8 chr2 14954730 14954856 -238301727 - MER103 DNA DNA -1 165 31 227 271 96 66 chr2 14954978 14955144 -238301439 - L2 LINE L2 -1211 2103 1933 472 260 60 13 chr2 14955556 14955706 -238300877 + L1MC4 LINE L1 6464 6620 -1422 875 281 62 11 chr2 14955914 14956241 -238300342 + L1MC4 LINE L1 7472 7708 -100 2291 97 6 3 chr2 14956655 14956966 -238299617 - AluSx SINE Alu 0 312 1 3093 124 22 0 chr2 14957280 14957739 -238298844 - L1PB1 LINE L1 -8 6143 5675 1780 100 0 0 chr2 14957739 14957980 -238298603 + L1PB1 LINE L1 5452 5692 -459 1301 141 13 53 chr2 14958018 14958245 -238298338 + MER20 DNA MER1_type 1 218 -1 222 254 15 45 chr2 14959104 14959171 -238297412 + L2 LINE L2 3203 3267 -5 375 276 372 0 chr2 14959497 14959696 -238296887 + L3 LINE CR1 1123 1395 -182 294 50 0 0 chr2 14959784 14959824 -238296759 + (A)n Simple_repeat Simple_repeat 1 40 0 320 336 53 0 chr2 14959872 14959985 -238296598 + MIR SINE MIR 32 150 -112 446 280 14 21 chr2 14960511 14960654 -238295929 + MIR SINE MIR 56 197 -65 230 317 60 30 chr2 14961113 14961296 -238295287 + MIR SINE MIR 20 256 -6 238 322 0 0 chr2 14962983 14963042 -238293541 + L2 LINE L2 3201 3259 -13 1997 153 15 73 chr2 14963349 14963761 -238292822 + MLT1B LTR MaLR 3 390 0 316 260 89 41 chr2 14963849 14963972 -238292611 - L1 LINE L1 -3482 2664 2536 * 9034 165 37 81 chr2 14963970 14964603 -238291980 + L1MB1 LINE L1 3093 3752 -2560 219 69 0 0 chr2 14964603 14964632 -238291951 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 9034 165 37 81 chr2 14964632 14966877 -238289706 + L1MB1 LINE L1 3752 5831 -481 1663 182 0 67 chr2 14966877 14967206 -238289377 + AluJb SINE Alu 1 307 -5 813 131 0 0 chr2 14967206 14967336 -238289247 + (GGAGA)n Simple_repeat Simple_repeat 2 131 0 2123 141 35 3 chr2 14967341 14967681 -238288902 + L1MB1 LINE L1 5818 6168 0 319 277 40 79 chr2 14967938 14968115 -238288468 + MIR SINE MIR 28 197 -65 205 200 0 22 chr2 14968462 14968507 -238288076 + (TAG)n Simple_repeat Simple_repeat 3 46 0 2572 154 46 2 chr2 14968632 14969042 -238287541 - MSTC LTR MaLR 0 428 1 396 269 21 0 chr2 14970770 14970863 -238285720 - MIR3 SINE MIR -52 156 62 407 224 17 43 chr2 14970863 14970979 -238285604 + MLT1G1 LTR MaLR 1 113 -482 693 223 129 45 chr2 14971028 14971180 -238285403 + MER20 DNA MER1_type 1 176 -43 2277 97 0 0 chr2 14971180 14971478 -238285105 + AluSg SINE Alu 1 298 -12 693 223 129 45 chr2 14971478 14971527 -238285056 + MER20 DNA MER1_type 176 219 0 321 284 95 35 chr2 14971864 14972367 -238284216 - L1ME LINE L1 -452 5669 5127 1615 164 26 10 chr2 14972683 14972987 -238283596 + AluJb SINE Alu 1 309 -3 2315 102 10 0 chr2 14973037 14973340 -238283243 + AluSq SINE Alu 5 310 -3 266 260 47 53 chr2 14973529 14973698 -238282885 - L1ME3A LINE L1 -242 5927 5757 292 308 91 35 chr2 14973868 14974154 -238282429 + L1MD2 LINE L1 4711 5012 -1134 726 141 0 0 chr2 14974161 14974289 -238282294 + (GGAA)n Simple_repeat Simple_repeat 1 128 0 213 216 11 34 chr2 14974406 14974494 -238282089 + (TATAA)n Simple_repeat Simple_repeat 2 87 0 385 281 118 58 chr2 14974680 14975094 -238281489 + L1MD2 LINE L1 5365 5845 -324 564 274 169 37 chr2 14975117 14975548 -238281035 + LTR33 LTR ERVL 26 513 -8 255 61 0 0 chr2 14975597 14975630 -238280953 + (CA)n Simple_repeat Simple_repeat 2 34 0 2093 114 94 28 chr2 14976867 14977219 -238279364 - THE1C LTR MaLR 0 375 1 368 303 49 21 chr2 14977253 14977395 -238279188 - L2 LINE L2 -5 3267 3122 2449 100 0 0 chr2 14977509 14977818 -238278765 - AluSg SINE Alu -1 309 1 197 341 29 58 chr2 14977821 14977994 -238278589 - L2 LINE L2 -224 3048 2881 248 333 86 8 chr2 14978021 14978138 -238278445 - L2 LINE L2 -535 2779 2654 285 207 74 58 chr2 14978552 14978673 -238277910 - L1ME4a LINE L1 -32 6089 5967 297 360 22 11 chr2 14979051 14979229 -238277354 + MIR SINE MIR 19 198 -64 1827 264 62 14 chr2 14980316 14980835 -238275748 - MLT1H1 LTR MaLR 0 555 12 596 288 68 27 chr2 14981722 14981941 -238274642 + MIR SINE MIR 33 260 -2 400 308 0 0 chr2 14982119 14982223 -238274360 - L2 LINE L2 0 3313 3210 377 335 72 0 chr2 14982587 14982754 -238273829 - MIR SINE MIR -36 226 48 396 320 48 52 chr2 14983645 14983876 -238272707 + MIR SINE MIR 21 250 -12 1859 124 9 53 chr2 14983877 14984199 -238272384 - AluJb SINE Alu -4 308 1 243 191 0 0 chr2 14984733 14984773 -238271810 + MLT2B1 LTR ERVL 2 41 -373 319 190 0 0 chr2 14984773 14984831 -238271752 + MER52A LTR ERV1 1 58 -1697 4712 200 93 15 chr2 14985428 14986586 -238269997 + MER52A LTR ERV1 202 1512 -243 335 62 21 0 chr2 14986591 14986639 -238269944 + MER52C LTR ERV1 1230 1278 0 1230 243 101 42 chr2 14986639 14987056 -238269527 + MLT2B1 LTR ERVL 38 486 -34 309 26 0 0 chr2 14987056 14987094 -238269489 + (CA)n Simple_repeat Simple_repeat 2 39 0 1230 243 101 42 chr2 14987094 14987132 -238269451 + MLT2B1 LTR ERVL 486 520 0 197 297 16 31 chr2 14987659 14987723 -238268860 - L2 LINE L2 0 3272 3210 196 343 205 24 chr2 14988522 14988688 -238267895 - MIR3 SINE MIR 0 208 13 820 165 8 0 chr2 14988984 14989117 -238267466 - AluJo SINE Alu -178 134 1 448 262 95 48 chr2 14989208 14989376 -238267207 - MIR3 SINE MIR -7 201 26 473 217 151 60 chr2 14989447 14989579 -238267004 - Charlie8 DNA MER1_type -105 225 74 2451 85 0 3 chr2 14989579 14989884 -238266699 - AluSg SINE Alu -6 304 1 473 217 151 60 chr2 14989884 14989917 -238266666 - Charlie8 DNA MER1_type -256 74 45 1182 142 0 21 chr2 14991130 14991320 -238265263 + Tigger2a DNA MER2_type 24 209 -225 2205 132 0 0 chr2 14991358 14991669 -238264914 - AluSx SINE Alu -1 311 1 1246 181 33 8 chr2 14991669 14991904 -238264679 + Tigger2a DNA MER2_type 191 434 0 2220 120 0 0 chr2 14992970 14993269 -238263314 + AluSx SINE Alu 1 299 -13 752 236 140 14 chr2 14993340 14993632 -238262951 + L1ME4a LINE L1 5541 5869 -252 2249 135 33 33 chr2 14995059 14995423 -238261160 - THE1B LTR MaLR 0 364 1 497 223 120 65 chr2 14996873 14997057 -238259526 - LTR16C LTR ERVL -151 340 147 1415 188 26 32 chr2 14997279 14997628 -238258955 - MLT1A1 LTR MaLR 0 428 20 251 182 227 0 chr2 14997670 14997736 -238258847 + MIR SINE MIR 182 262 0 653 75 58 23 chr2 14997754 14997927 -238258656 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 695 85 45 28 chr2 14997955 14998131 -238258452 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 403 57 119 16 chr2 14998108 14998412 -238258171 + (TA)n Simple_repeat Simple_repeat 1 335 0 * 430 102 88 0 chr2 14998420 14998567 -238258016 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 966 264 5 0 chr2 14998570 14998763 -238257820 + MER58A DNA MER1_type 2 195 -29 264 167 0 0 chr2 14998792 14998840 -238257743 + (CA)n Simple_repeat Simple_repeat 1 48 0 1887 122 33 0 chr2 14998861 14999132 -238257451 + AluSg SINE Alu 1 280 -30 238 290 65 9 chr2 14999163 14999270 -238257313 + L1ME4a LINE L1 6003 6115 -6 378 287 66 12 chr2 14999376 14999543 -238257040 + Charlie7 DNA MER1_type 66 241 -2371 606 251 40 60 chr2 14999643 14999894 -238256689 + Charlie7 DNA MER1_type 905 1150 -1462 257 302 73 0 chr2 14999901 14999997 -238256586 - MER91C DNA MER1_type -14 126 24 3963 220 117 31 chr2 15000020 15001296 -238255287 + Charlie7 DNA MER1_type 1148 2533 -79 22 56 0 0 chr2 15001352 15001388 -238255195 + AT_rich Low_complexity Low_complexity 1 36 0 182 163 265 0 chr2 15002272 15002321 -238254262 - L2 LINE L2 -4 3309 3248 639 117 0 0 chr2 15002814 15002917 -238253666 + (GGAA)n Simple_repeat Simple_repeat 4 106 0 279 206 83 33 chr2 15003154 15003249 -238253334 + MER5A DNA MER1_type 30 119 -59 183 246 53 18 chr2 15003272 15003329 -238253254 - L2 LINE L2 0 3313 3255 275 319 121 0 chr2 15003374 15003490 -238253093 + L2 LINE L2 3142 3271 -1 2539 132 22 0 chr2 15003831 15004187 -238252396 + THE1B LTR MaLR 1 364 0 302 283 81 0 chr2 15004207 15004306 -238252277 - L2 LINE L2 -5 3308 3202 3070 67 12 7 chr2 15004381 15004785 -238251798 - L1PA7 LINE L1 -495 5659 5254 3876 64 0 4 chr2 15004788 15005244 -238251339 + L1PA7 LINE L1 5688 6141 -13 386 259 75 20 chr2 15005316 15005463 -238251120 - L3 LINE CR1 -813 764 610 339 113 0 0 chr2 15006260 15006322 -238250261 + (TC)n Simple_repeat Simple_repeat 1 62 0 183 371 21 10 chr2 15006356 15006453 -238250130 + L2 LINE L2 2985 3082 -190 1118 298 45 13 chr2 15006536 15006918 -238249665 - LTR16C LTR ERVL 0 491 98 1397 200 23 58 chr2 15006941 15007286 -238249297 + MLT1B LTR MaLR 58 390 0 249 128 0 0 chr2 15007450 15007489 -238249094 - MIR SINE MIR -6 256 218 2379 213 44 21 chr2 15007515 15008083 -238248500 - L1ME1 LINE L1 -5 6161 5581 413 324 111 5 chr2 15008083 15008290 -238248293 - MIR SINE MIR -32 230 2 1812 168 20 20 chr2 15009340 15009697 -238246886 - MLT1A1 LTR MaLR -5 360 4 304 325 181 48 chr2 15009795 15010109 -238246474 + HAL1 LINE L1 17 372 -2135 684 255 132 38 chr2 15010397 15010738 -238245845 + HAL1 LINE L1 529 901 -1606 328 278 68 12 chr2 15010898 15011060 -238245523 + HAL1 LINE L1 2173 2343 -164 263 187 44 0 chr2 15011705 15011796 -238244787 + (TTATA)n Simple_repeat Simple_repeat 3 97 0 302 330 27 66 chr2 15012176 15012434 -238244149 + HAL1b LINE L1 55 302 -1046 265 299 127 28 chr2 15012601 15012885 -238243698 + HAL1b LINE L1 526 837 -511 1380 232 160 77 chr2 15013040 15013157 -238243426 + L1MC5 LINE L1 6476 6582 -1379 378 0 0 0 chr2 15013157 15013199 -238243384 + (TG)n Simple_repeat Simple_repeat 2 43 0 1380 232 160 77 chr2 15013199 15014003 -238242580 + L1MC5 LINE L1 6582 7519 -442 2159 167 21 5 chr2 15014003 15014386 -238242197 - MLT1B LTR MaLR -1 389 1 1380 232 160 77 chr2 15014386 15014468 -238242115 + L1MC5 LINE L1 7519 7593 -368 248 295 53 47 chr2 15014486 15014676 -238241907 + L1ME3A LINE L1 5969 6159 -11 271 165 10 136 chr2 15014686 15014789 -238241794 + HAL1 LINE L1 2306 2395 -112 181 296 0 82 chr2 15014928 15015026 -238241557 + L2 LINE L2 3183 3272 0 21 0 0 0 chr2 15015325 15015346 -238241237 + AT_rich Low_complexity Low_complexity 1 21 0 1307 205 7 40 chr2 15015347 15015644 -238240939 - AluJo SINE Alu -21 291 5 1270 189 120 49 chr2 15016092 15016246 -238240337 - MLT1B LTR MaLR -16 374 232 216 0 0 0 chr2 15016246 15016270 -238240313 + (GA)n Simple_repeat Simple_repeat 2 25 0 1270 189 120 49 chr2 15016270 15016464 -238240119 - MLT1B LTR MaLR -158 232 1 361 281 34 20 chr2 15017388 15017534 -238239049 + MER103 DNA DNA 16 163 -3 979 235 127 67 chr2 15018226 15018754 -238237829 + MLT1H1 LTR MaLR 2 541 -4 2021 83 9 94 chr2 15019136 15019475 -238237108 - AluSq SINE Alu -3 310 1 459 273 84 21 chr2 15020084 15020227 -238236356 - MIR SINE MIR -19 243 92 275 331 40 54 chr2 15020295 15020443 -238236140 - MIR SINE MIR -75 187 42 1813 209 10 33 chr2 15021359 15021846 -238234737 + Charlie4a DNA MER1_type 26 501 -7 2267 120 31 111 chr2 15021986 15022436 -238234147 - MSTB LTR MaLR -12 414 1 243 167 0 0 chr2 15023185 15023227 -238233356 - LTR16C LTR ERVL -1 490 449 2308 120 35 107 chr2 15023237 15023696 -238232887 + MSTB LTR MaLR 1 426 0 7143 195 41 33 chr2 15023700 15025002 -238231581 + MLT1H1-int LTR MaLR 4 1260 -391 2581 161 26 0 chr2 15025002 15025419 -238231164 - MSTA LTR MaLR 0 428 1 7143 195 41 33 chr2 15025419 15025815 -238230768 + MLT1H1-int LTR MaLR 1260 1651 0 2422 175 19 9 chr2 15025815 15026237 -238230346 + MSTB LTR MaLR 1 426 0 806 214 33 33 chr2 15026243 15026458 -238230125 - LTR16C LTR ERVL -87 404 190 501 332 62 5 chr2 15026610 15026818 -238229765 - MIR SINE MIR -7 255 36 642 212 179 0 chr2 15026884 15027035 -238229548 + MER45A DNA AcHobo 1 178 0 1151 213 106 10 chr2 15027959 15028260 -238228323 + MER46C DNA MER2_type 1 330 -8 1598 199 93 30 chr2 15029764 15030184 -238226399 - L1MB5 LINE L1 -15 6159 5711 246 325 151 0 chr2 15030352 15030518 -238226065 - MIR SINE MIR -70 192 2 286 232 207 0 chr2 15030692 15030774 -238225809 + Charlie7 DNA MER1_type 1 99 -2513 29 0 0 0 chr2 15031019 15031048 -238225535 + AT_rich Low_complexity Low_complexity 1 29 0 270 300 11 11 chr2 15031228 15031318 -238225265 + MIR SINE MIR 48 137 -125 360 0 0 0 chr2 15031435 15031479 -238225104 - L1PA3 LINE L1 -3 6152 6109 2007 168 94 8 chr2 15031508 15031902 -238224681 - MSTA LTR MaLR 0 428 1 3963 120 35 33 chr2 15031905 15032597 -238223986 + L1MC1 LINE L1 5636 6328 -5 276 263 70 61 chr2 15032953 15033067 -238223516 - L2 LINE L2 -21 3251 3137 345 318 48 32 chr2 15033176 15033365 -238223218 - L2 LINE L2 -215 3057 2866 294 29 0 0 chr2 15033889 15033924 -238222659 + (TC)n Simple_repeat Simple_repeat 2 36 0 1583 208 14 20 chr2 15033933 15034289 -238222294 + MLT1A1 LTR MaLR 11 364 -1 216 67 0 0 chr2 15034289 15034319 -238222264 + (TC)n Simple_repeat Simple_repeat 1 30 0 1434 81 72 32 chr2 15035604 15035825 -238220758 + MER30 DNA MER1_type 1 230 0 921 239 43 10 chr2 15036172 15036381 -238220202 - MER58A DNA MER1_type -8 216 1 1466 196 68 27 chr2 15036382 15036509 -238220074 + MLT1A1 LTR MaLR 1 121 -244 1927 115 68 41 chr2 15036509 15036874 -238219709 + THE1C LTR MaLR 1 375 0 1466 196 68 27 chr2 15036874 15037083 -238219500 + MLT1A1 LTR MaLR 121 351 -14 896 145 50 13 chr2 15037614 15037773 -238218810 - FRAM SINE Alu -14 162 1 200 329 61 42 chr2 15037934 15038147 -238218436 - L2 LINE L2 -199 3073 2857 278 50 25 0 chr2 15039331 15039371 -238217212 + (TG)n Simple_repeat Simple_repeat 1 41 0 1845 245 85 35 chr2 15039701 15040243 -238216340 + MLT1G1 LTR MaLR 2 570 -25 307 309 105 17 chr2 15040264 15040424 -238216159 + MIR SINE MIR 43 214 -48 225 259 0 37 chr2 15040756 15040810 -238215773 + HAL1 LINE L1 619 670 -1837 268 243 9 9 chr2 15040952 15041059 -238215524 + CT-rich Low_complexity Low_complexity 2 108 0 267 284 45 78 chr2 15041147 15041349 -238215234 - MIR SINE MIR -45 217 23 216 0 0 0 chr2 15041517 15041541 -238215042 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 356 294 140 47 chr2 15042993 15043207 -238213376 - MIR SINE MIR -21 241 8 198 240 147 0 chr2 15043374 15043449 -238213134 - L3 LINE CR1 -239 1338 1253 3117 77 70 0 chr2 15043484 15043856 -238212727 + MLT2A1 LTR ERVL 1 406 -38 253 61 20 20 chr2 15043856 15043905 -238212678 + (TA)n Simple_repeat Simple_repeat 1 49 0 3117 77 70 0 chr2 15043905 15043947 -238212636 + MLT2A1 LTR ERVL 406 444 0 273 288 68 34 chr2 15044304 15044422 -238212161 - L2 LINE L2 -7 3306 3185 223 222 67 4 chr2 15044526 15044591 -238211992 + MIR SINE MIR 4 73 -135 351 78 0 0 chr2 15045220 15045271 -238211312 + (TG)n Simple_repeat Simple_repeat 2 52 0 800 214 52 6 chr2 15045555 15045728 -238210855 + MER5A DNA MER1_type 7 187 -2 300 323 81 10 chr2 15045811 15045910 -238210673 - L2 LINE L2 -6 3307 3202 867 283 60 0 chr2 15045920 15046153 -238210430 + MIR SINE MIR 13 259 -3 397 323 30 12 chr2 15046887 15047051 -238209532 + L3 LINE CR1 1232 1398 -179 2316 77 6 6 chr2 15047148 15047460 -238209123 + AluSp SINE Alu 1 312 -1 400 373 61 32 chr2 15048038 15048381 -238208202 - L2 LINE L2 -1 3271 2919 731 239 13 32 chr2 15048417 15048647 -238207936 + MER57-int LTR ERV1 2357 3561 -2385 1112 183 39 128 chr2 15048653 15048887 -238207696 + MER57-int LTR ERV1 2477 2730 -2206 1951 159 86 21 chr2 15048887 15049259 -238207324 + MSTD LTR MaLR 1 396 0 1112 183 39 128 chr2 15049259 15049310 -238207273 + MER57-int LTR ERV1 2730 2784 -2152 1569 174 87 3 chr2 15049310 15049598 -238206985 - AluJb SINE Alu 0 312 1 1112 183 39 128 chr2 15049598 15049769 -238206814 + MER57-int LTR ERV1 2784 2875 -2061 808 169 71 19 chr2 15049769 15049923 -238206660 + FRAM SINE Alu 5 166 0 1112 183 39 128 chr2 15049923 15050086 -238206497 + MER57-int LTR ERV1 2875 3051 -1885 * 1620 196 31 54 chr2 15050074 15050466 -238206117 + MER57-int LTR ERV1 5190 5572 -1965 1867 304 47 47 chr2 15050978 15051680 -238204903 + MER57-int LTR ERV1 6233 6937 -600 2032 119 0 7 chr2 15051680 15051982 -238204601 - AluSx SINE Alu -8 304 5 1867 304 47 47 chr2 15051982 15052191 -238204392 + MER57-int LTR ERV1 6936 7144 -393 798 187 215 124 chr2 15052191 15052565 -238204018 + MER57B LTR ERV1 1 403 0 669 309 119 4 chr2 15053199 15053477 -238203106 + L3 LINE CR1 1264 1573 -4 313 331 105 8 chr2 15053543 15053667 -238202916 + MIR SINE MIR 46 181 -81 207 297 123 32 chr2 15054990 15055145 -238201438 + MIR SINE MIR 89 257 -5 1590 212 66 20 chr2 15056228 15056577 -238200006 - MLT1A1 LTR MaLR 0 365 1 437 321 73 0 chr2 15057583 15057748 -238198835 + MIR SINE MIR 8 184 -78 194 300 0 0 chr2 15058239 15058279 -238198304 - MIR SINE MIR -163 99 60 228 285 8 89 chr2 15058546 15058669 -238197914 + MLT1K LTR MaLR 289 401 -187 1915 148 45 35 chr2 15059241 15059618 -238196965 + L1MB2 LINE L1 5779 6159 -12 336 102 0 0 chr2 15059620 15059669 -238196914 + (CA)n Simple_repeat Simple_repeat 1 49 0 369 337 70 0 chr2 15059685 15059857 -238196726 + MIR SINE MIR 20 203 -59 323 345 57 11 chr2 15059888 15060065 -238196518 - L2 LINE L2 -504 2810 2626 213 307 151 85 chr2 15060282 15060494 -238196089 + L3 LINE CR1 1347 1572 -5 327 298 73 8 chr2 15060929 15061053 -238195530 + MIR SINE MIR 20 151 -111 335 258 0 94 chr2 15063278 15063406 -238193177 - MER5B DNA MER1_type -62 116 1 2247 94 0 3 chr2 15063634 15063933 -238192650 - AluSx SINE Alu -14 298 1 288 232 21 84 chr2 15064165 15064260 -238192323 + MIR SINE MIR 18 106 -156 217 208 63 10 chr2 15064278 15064344 -238192239 - MIR SINE MIR -109 153 84 368 253 12 0 chr2 15064831 15064914 -238191669 + MIR3 SINE MIR 90 173 -35 235 298 128 66 chr2 15066306 15066537 -238190046 - MIR SINE MIR -10 252 4 383 318 106 23 chr2 15067398 15067615 -238188968 - MIR SINE MIR -27 235 1 2177 108 10 3 chr2 15068459 15068764 -238187819 - AluSq SINE Alu -6 307 1 195 326 20 0 chr2 15068777 15068826 -238187757 + L2 LINE L2 3129 3178 -94 487 232 42 28 chr2 15069479 15069621 -238186962 + L2 LINE L2 3166 3309 -4 368 316 106 72 chr2 15071231 15071477 -238185106 - L1ME4a LINE L1 -225 5896 5660 1987 169 37 5 chr2 15071477 15071855 -238184728 + MLT1B LTR MaLR 1 390 0 368 316 106 72 chr2 15071855 15072136 -238184447 - L1ME4a LINE L1 -461 5660 5351 381 293 176 24 chr2 15072670 15072875 -238183708 + MIR SINE MIR 20 255 -7 355 265 37 22 chr2 15074161 15074297 -238182286 + L3 LINE CR1 1223 1360 -217 330 239 261 23 chr2 15074548 15074678 -238181905 + MIR SINE MIR 8 168 -94 2268 77 30 0 chr2 15074801 15075101 -238181482 - AluY SINE Alu -2 309 1 1168 232 117 20 chr2 15076104 15076295 -238180288 + L1MD2 LINE L1 5914 6085 -274 231 36 0 0 chr2 15076295 15076323 -238180260 + (CA)n Simple_repeat Simple_repeat 2 29 0 1168 232 117 20 chr2 15076323 15076403 -238180180 + L1MD2 LINE L1 6085 6156 -203 1072 151 84 36 chr2 15076403 15076628 -238179955 - MER46A DNA MER2_type 0 236 1 1168 232 117 20 chr2 15076628 15076747 -238179836 + L1MD2 LINE L1 6156 6343 -16 240 174 0 70 chr2 15078022 15078108 -238178475 + (TATATG)n Simple_repeat Simple_repeat 2 81 0 238 322 11 23 chr2 15078570 15078657 -238177926 + L2 LINE L2 3182 3267 -5 225 239 11 45 chr2 15079150 15079238 -238177345 - L1ME LINE L1 -268 5853 5769 564 186 145 7 chr2 15080500 15080645 -238175938 + MER3 DNA MER1_type 40 204 -5 195 347 194 10 chr2 15080659 15080757 -238175826 + L2 LINE L2 2909 3024 -248 282 232 62 54 chr2 15082118 15082230 -238174353 - MIR SINE MIR -54 208 96 269 310 45 18 chr2 15083420 15083576 -238173007 - MIR3 SINE MIR -46 162 1 3032 144 22 38 chr2 15084046 15084580 -238172003 - MER1A DNA MER1_type -1 526 1 209 349 74 11 chr2 15084943 15085132 -238171451 + MIR SINE MIR 31 231 -31 425 261 7 0 chr2 15085904 15086046 -238170537 + (TA)n Simple_repeat Simple_repeat 2 144 0 266 227 20 193 chr2 15086942 15087092 -238169491 + MIR SINE MIR 20 141 -67 222 118 0 0 chr2 15087214 15087248 -238169335 + (TTA)n Simple_repeat Simple_repeat 2 35 0 196 356 37 15 chr2 15088762 15088897 -238167686 + MER5A DNA MER1_type 17 154 -35 528 269 72 14 chr2 15089520 15089728 -238166855 + MIR SINE MIR 2 221 -41 22 35 0 0 chr2 15090309 15090338 -238166245 + AT_rich Low_complexity Low_complexity 1 29 0 284 262 148 49 chr2 15091388 15091510 -238165073 - MIR SINE MIR -71 191 58 1027 260 54 80 chr2 15091682 15092167 -238164416 + L2 LINE L2 2841 3312 -1 213 39 0 0 chr2 15092186 15092212 -238164371 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 27 29 0 0 chr2 15092219 15092253 -238164330 + AT_rich Low_complexity Low_complexity 1 34 0 674 320 28 49 chr2 15093644 15093928 -238162655 + L1MDb LINE L1 138 415 -6128 1931 230 94 23 chr2 15093933 15094632 -238161951 + L1MDb LINE L1 1531 2279 -4261 795 251 52 21 chr2 15094636 15094963 -238161620 + L1M4 LINE L1 4080 4416 -1730 634 211 58 2 chr2 15094976 15095175 -238161408 + MSTC LTR MaLR 1 210 -186 685 151 196 22 chr2 15095176 15095355 -238161228 + L1MD2 LINE L1 5870 6079 -280 3884 165 10 14 chr2 15095355 15096069 -238160514 + MER50 LTR ERV1 1 711 -23 1406 173 14 14 chr2 15096069 15096353 -238160230 + L1MD2 LINE L1 6075 6358 -1 251 306 74 46 chr2 15097171 15097279 -238159304 + MIR SINE MIR 65 175 -87 2409 76 0 3 chr2 15098681 15098982 -238157601 + AluY SINE Alu 1 300 -11 291 344 65 19 chr2 15099532 15099686 -238156897 + MIR SINE MIR 100 260 -2 1878 157 41 3 chr2 15099733 15100027 -238156556 - AluJb SINE Alu -7 305 1 240 233 0 0 chr2 15101354 15101397 -238155186 + MIR SINE MIR 206 248 -14 2144 96 7 0 chr2 15102349 15102674 -238153909 - AluSp SINE Alu 0 327 1 382 254 94 43 chr2 15102798 15102936 -238153647 + MIR SINE MIR 40 184 -78 355 316 68 23 chr2 15103071 15103248 -238153335 + MIR SINE MIR 66 250 -12 957 209 145 59 chr2 15103558 15103683 -238152900 + L1MC4a LINE L1 6138 6251 -1557 570 71 0 0 chr2 15103683 15103767 -238152816 + (TG)n Simple_repeat Simple_repeat 1 84 0 957 209 145 59 chr2 15103767 15103813 -238152770 + L1MC4a LINE L1 6251 6292 -1516 1652 190 16 10 chr2 15103813 15104123 -238152460 + AluJo SINE Alu 1 312 0 957 209 145 59 chr2 15104123 15104356 -238152227 + L1MC4a LINE L1 6292 6578 -1230 3917 66 2 0 chr2 15104356 15104858 -238151725 + L1PA5 LINE L1 5652 6154 0 2350 120 20 32 chr2 15104894 15105445 -238151138 + L1MA2 LINE L1 3207 3749 -3816 1315 225 68 6 chr2 15105445 15105783 -238150800 + THE1B LTR MaLR 6 364 0 8673 138 38 43 chr2 15105785 15107371 -238149212 + THE1C-int LTR MaLR 3 1580 0 1628 168 85 26 chr2 15107373 15107725 -238148858 + THE1C LTR MaLR 3 375 0 3347 223 52 15 chr2 15107736 15107911 -238148672 + L1MA2 LINE L1 3769 3936 -3629 2115 122 47 39 chr2 15107911 15108272 -238148311 - THE1B LTR MaLR 0 364 1 3347 223 52 15 chr2 15108272 15109360 -238147223 + L1MA2 LINE L1 3936 5140 -2425 * 6537 134 10 2 chr2 15109356 15111113 -238145470 + L1MA2 LINE L1 5955 7723 0 368 243 114 4 chr2 15111136 15111346 -238145237 + L1MD3 LINE L1 7559 7985 0 268 349 77 0 chr2 15112034 15112229 -238144354 + L2 LINE L2 2610 2819 -495 2355 104 41 16 chr2 15112410 15112775 -238143808 + THE1C LTR MaLR 1 374 -1 500 272 66 0 chr2 15112879 15113015 -238143568 - MIR SINE MIR -51 211 67 254 354 0 0 chr2 15113044 15113123 -238143460 + L2 LINE L2 3186 3264 -8 212 371 34 34 chr2 15113401 15113490 -238143093 + MIR SINE MIR 3 91 -171 190 210 290 16 chr2 15113963 15114025 -238142558 + MIR SINE MIR 23 101 -107 212 306 97 93 chr2 15114076 15114292 -238142291 - L2 LINE L2 -94 3219 3003 * 324 333 0 18 chr2 15114283 15114397 -238142186 + MIR3 SINE MIR 93 204 -4 189 336 63 35 chr2 15115578 15115721 -238140862 - MIR3 SINE MIR -46 162 16 21 0 0 0 chr2 15117731 15117752 -238138831 + AT_rich Low_complexity Low_complexity 1 21 0 2004 119 13 23 chr2 15118261 15118564 -238138019 - AluSx SINE Alu -12 300 1 6141 64 6 73 chr2 15119158 15120129 -238136454 - SVA Other Other 0 1386 481 182 308 0 15 chr2 15121172 15121237 -238135346 + MIR SINE MIR 186 249 -13 601 307 4 57 chr2 15121731 15121975 -238134608 + MIR SINE MIR 18 248 -14 312 252 135 1 chr2 15122513 15122613 -238133970 - MIR SINE MIR -93 115 3 227 316 53 0 chr2 15123085 15123218 -238133365 + L1MC4 LINE L1 7898 8037 -5 2033 99 0 0 chr2 15123419 15123681 -238132902 + AluSc SINE Alu 35 296 -13 569 209 223 0 chr2 15125774 15125922 -238130661 + MER5A DNA MER1_type 9 189 0 354 229 82 16 chr2 15125983 15126105 -238130478 + MIR SINE MIR 107 236 -26 1762 179 39 6 chr2 15126629 15126986 -238129597 - L1MA6 LINE L1 -1877 4269 3901 * 5265 157 37 25 chr2 15126984 15128896 -238127687 + L1MA6 LINE L1 4276 6236 -64 2327 113 3 0 chr2 15128896 15129207 -238127376 + AluSx SINE Alu 1 312 0 5265 157 37 25 chr2 15129207 15129273 -238127310 + L1MA6 LINE L1 6236 6300 0 2203 120 3 3 chr2 15129336 15129645 -238126938 + AluSq SINE Alu 1 309 -4 189 0 0 0 chr2 15130230 15130251 -238126332 + (A)n Simple_repeat Simple_repeat 1 21 0 242 355 118 18 chr2 15130726 15131005 -238125578 + L2 LINE L2 2936 3242 -30 325 277 50 0 chr2 15131275 15131376 -238125207 + MIR SINE MIR 46 151 -111 405 174 91 50 chr2 15132716 15132837 -238123746 - MIR SINE MIR -7 255 130 321 313 116 45 chr2 15134721 15134945 -238121638 + MIR SINE MIR 12 251 -11 558 272 119 25 chr2 15134980 15135182 -238121401 - MIR SINE MIR -1 261 41 605 230 72 34 chr2 15135394 15135659 -238120924 + L1MC5 LINE L1 7611 7885 -76 181 197 0 99 chr2 15135681 15135752 -238120831 - MIR SINE MIR -82 180 117 1653 128 135 4 chr2 15136118 15136392 -238120191 + AluJb SINE Alu 1 310 -2 37 81 0 0 chr2 15136433 15136519 -238120064 + AT_rich Low_complexity Low_complexity 1 86 0 1186 95 0 24 chr2 15137397 15137608 -238118975 - AluSg/x SINE Alu 0 333 125 2359 76 0 7 chr2 15137608 15137911 -238118672 - AluSg SINE Alu -9 301 1 386 356 53 22 chr2 15138828 15139148 -238117435 + L1ME4a LINE L1 5630 5959 -162 255 61 0 0 chr2 15139206 15139239 -238117344 + (TG)n Simple_repeat Simple_repeat 2 34 0 212 161 0 18 chr2 15139239 15139257 -238117326 + (TA)n Simple_repeat Simple_repeat 1 18 -37 1165 162 83 5 chr2 15139257 15139473 -238117110 - MER46A DNA MER2_type -3 233 1 212 161 0 18 chr2 15139473 15139510 -238117073 + (TA)n Simple_repeat Simple_repeat 18 55 0 183 80 0 0 chr2 15139526 15139551 -238117032 + (CATATA)n Simple_repeat Simple_repeat 6 30 0 21 36 0 0 chr2 15139729 15139757 -238116826 + AT_rich Low_complexity Low_complexity 1 28 0 2020 81 0 50 chr2 15140175 15140472 -238116111 + AluY SINE Alu 19 300 -11 239 339 39 31 chr2 15140768 15140895 -238115688 - MIR SINE MIR -60 148 21 446 301 142 19 chr2 15141313 15141522 -238115061 + MIR SINE MIR 10 248 -14 198 323 48 16 chr2 15141651 15141775 -238114808 + L2 LINE L2 2776 2903 -411 690 201 14 0 chr2 15142849 15142988 -238113595 + L2 LINE L2 2501 2641 -673 392 297 117 34 chr2 15143039 15143278 -238113305 + MLT1J1 LTR MaLR 65 323 -123 572 266 123 30 chr2 15144925 15145343 -238111240 + L2 LINE L2 2677 3128 -185 205 327 18 0 chr2 15145373 15145428 -238111155 + L2 LINE L2 3230 3285 -28 564 77 0 0 chr2 15145436 15145514 -238111069 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 685 253 10 21 chr2 15145625 15145819 -238110764 - MER58C DNA MER1_type -23 192 1 387 374 37 41 chr2 15146048 15146294 -238110289 + L2 LINE L2 3027 3271 -1 350 283 68 118 chr2 15146587 15146969 -238109614 - L2 LINE L2 -1 3271 2909 406 151 0 0 chr2 15146988 15147061 -238109522 - MER41B LTR ERV1 -1 634 562 2567 116 50 0 chr2 15147061 15147500 -238109083 + L1PA7 LINE L1 1976 2436 -3710 303 163 0 0 chr2 15147517 15147597 -238108986 + (TA)n Simple_repeat Simple_repeat 1 80 0 20594 77 8 0 chr2 15147635 15151306 -238105277 + L1PA7 LINE L1 2480 6154 0 3108 101 30 0 chr2 15151317 15151782 -238104801 - MER41A LTR ERV1 -75 479 1 2399 87 3 0 chr2 15152054 15152365 -238104218 + AluSp SINE Alu 2 313 0 471 341 82 39 chr2 15152600 15152905 -238103678 - L2 LINE L2 -14 3258 2941 944 240 93 20 chr2 15153329 15153629 -238102954 + Charlie2 DNA MER1_type 1 322 -2540 2967 158 128 11 chr2 15153645 15154278 -238102305 + LTR8A LTR ERV1 2 708 -19 245 179 0 36 chr2 15154311 15154367 -238102216 + Charlie2 DNA MER1_type 1878 1931 -931 7517 184 31 12 chr2 15154398 15154740 -238101843 - L1PB1 LINE L1 -9 6142 5808 207 0 0 0 chr2 15154740 15154763 -238101820 + (TG)n Simple_repeat Simple_repeat 1 23 0 7517 184 31 12 chr2 15154763 15156130 -238100453 - L1PB1 LINE L1 -343 5808 4354 180 0 0 0 chr2 15156130 15156150 -238100433 + (TTA)n Simple_repeat Simple_repeat 2 21 0 7517 184 31 12 chr2 15156150 15157226 -238099357 - L1PB1 LINE L1 -1797 4354 3301 1915 127 22 0 chr2 15157233 15157509 -238099074 - AluSx SINE Alu -10 302 21 1209 216 60 24 chr2 15157509 15157879 -238098704 + Charlie2 DNA MER1_type 1916 2298 -564 4519 59 26 17 chr2 15157890 15158918 -238097665 + MER11A LTR ERVK 1 1266 0 238 250 168 53 chr2 15158918 15159118 -238097465 + Charlie2 DNA MER1_type 2308 2531 -331 1393 207 90 18 chr2 15159118 15159600 -238096983 + MER67B LTR ERV1 1 418 -243 436 233 38 18 chr2 15159571 15159802 -238096781 + MER67A LTR ERV1 273 543 0 * 522 189 161 23 chr2 15159824 15160041 -238096542 + Charlie2 DNA MER1_type 2555 2801 -61 291 330 45 27 chr2 15160109 15160221 -238096362 + MER5A DNA MER1_type 7 120 -69 279 116 0 0 chr2 15160578 15160621 -238095962 + MER112 DNA MER1_type 1 43 -217 407 298 61 17 chr2 15162092 15162273 -238094310 + MLT1K LTR MaLR 383 571 -17 181 331 169 0 chr2 15162317 15162441 -238094142 - MIR3 SINE MIR -62 146 2 835 181 0 0 chr2 15162988 15163121 -238093462 - AluJb SINE Alu -23 289 157 724 152 0 0 chr2 15163123 15163228 -238093355 - AluSq/x SINE Alu -206 107 3 225 355 59 33 chr2 15163232 15163384 -238093199 + L2 LINE L2 2688 2843 -471 350 337 84 17 chr2 15164449 15164627 -238091956 + MIR SINE MIR 12 201 -61 1940 121 95 14 chr2 15165776 15166123 -238090460 + THE1C LTR MaLR 1 375 0 388 241 0 46 chr2 15166197 15166305 -238090278 + L2 LINE L2 1245 1347 -1967 250 329 24 0 chr2 15166305 15166390 -238090193 + L2 LINE L2 1499 1585 -1729 26 0 0 0 chr2 15166408 15166434 -238090149 + AT_rich Low_complexity Low_complexity 1 26 0 681 321 60 0 chr2 15166505 15166757 -238089826 + L2 LINE L2 2069 2335 -979 414 89 89 54 chr2 15166759 15166871 -238089712 - L1MD3 LINE L1 -1 7994 7879 223 369 83 0 chr2 15167042 15167126 -238089457 + L2 LINE L2 3145 3235 -37 22 0 0 0 chr2 15167537 15167559 -238089024 + AT_rich Low_complexity Low_complexity 1 22 0 514 236 208 5 chr2 15168209 15168425 -238088158 + Charlie5 DNA MER1_type 2364 2623 0 23 0 0 0 chr2 15169171 15169194 -238087389 + AT_rich Low_complexity Low_complexity 1 23 0 3664 175 64 9 chr2 15169275 15170012 -238086571 + Charlie1 DNA MER1_type 1851 2643 -118 1905 118 56 7 chr2 15170012 15170299 -238086284 - AluSc SINE Alu -8 301 1 3664 175 64 9 chr2 15170299 15170419 -238086164 + Charlie1 DNA MER1_type 2643 2755 -6 354 285 181 7 chr2 15173314 15173458 -238083125 + MIR SINE MIR 1 169 -93 226 301 12 48 chr2 15173522 15173605 -238082978 - MIR SINE MIR -175 87 8 2194 91 7 24 chr2 15173630 15173928 -238082655 + AluY SINE Alu 1 293 -18 2067 128 0 55 chr2 15174592 15174919 -238081664 - AluSx SINE Alu -3 309 1 328 283 19 19 chr2 15175808 15175924 -238080659 + MIR SINE MIR 40 154 -70 467 374 28 0 chr2 15176404 15176583 -238080000 + MIR3 SINE MIR 16 199 -9 268 397 11 35 chr2 15178238 15178412 -238078171 + L2 LINE L2 3096 3265 -7 207 289 0 0 chr2 15178439 15178484 -238078099 - L2 LINE L2 -23 3249 3205 185 309 18 0 chr2 15179092 15179147 -238077436 - MIR SINE MIR -64 144 89 233 216 10 69 chr2 15180167 15180269 -238076314 + GA-rich Low_complexity Low_complexity 3 98 0 323 220 212 0 chr2 15180314 15180432 -238076151 - MIR SINE MIR -64 198 56 285 330 113 22 chr2 15181367 15181552 -238075031 - MIR SINE MIR 0 262 61 522 277 181 70 chr2 15182623 15183016 -238073567 + L2 LINE L2 2839 3269 -3 2570 98 13 16 chr2 15183138 15183514 -238073069 + THE1C LTR MaLR 1 375 0 305 327 102 29 chr2 15183524 15183729 -238072854 - MIR SINE MIR -38 224 5 328 349 8 23 chr2 15184156 15184285 -238072298 - MIR SINE MIR -111 151 25 920 330 63 67 chr2 15185099 15185493 -238071090 + L2 LINE L2 1947 2341 -931 2162 109 0 23 chr2 15185493 15185796 -238070787 - AluSx SINE Alu -16 296 1 920 330 63 67 chr2 15185796 15186735 -238069848 + L2 LINE L2 2341 3272 0 720 166 41 59 chr2 15187240 15187409 -238069174 + MER20 DNA MER1_type 1 166 -53 322 333 105 18 chr2 15188005 15188176 -238068407 - L2 LINE L2 -2 3270 3085 472 216 60 65 chr2 15188675 15188860 -238067723 - MER58C DNA MER1_type 0 215 32 1419 198 38 42 chr2 15188901 15189015 -238067568 - AluJo SINE Alu 0 312 199 183 80 0 0 chr2 15189015 15189040 -238067543 + (CCCA)n Simple_repeat Simple_repeat 2 26 0 1419 198 38 42 chr2 15189040 15189238 -238067345 - AluJo SINE Alu -113 199 1 2130 129 7 3 chr2 15189552 15189855 -238066728 + AluSc SINE Alu 1 304 -5 474 154 46 0 chr2 15189855 15189985 -238066598 + GA-rich Low_complexity Low_complexity 2 137 0 305 312 214 0 chr2 15190432 15190586 -238065997 + MIR3 SINE MIR 19 205 -3 707 267 42 33 chr2 15191028 15191268 -238065315 + MIR SINE MIR 14 255 -7 1890 134 0 50 chr2 15191819 15192117 -238064466 - AluSx SINE Alu -25 287 5 347 356 141 20 chr2 15193869 15194175 -238062408 - L2 LINE L2 -1 3271 2929 433 299 66 6 chr2 15195255 15195422 -238061161 + MIR SINE MIR 73 249 -13 247 333 111 21 chr2 15195620 15195764 -238060819 + MIR SINE MIR 26 182 -80 219 333 83 0 chr2 15195981 15196065 -238060518 + MIR3 SINE MIR 104 194 -14 1717 142 60 11 chr2 15196093 15196390 -238060193 + AluSx SINE Alu 1 310 0 1370 159 4 37 chr2 15196432 15196709 -238059874 + AluJo SINE Alu 48 316 0 253 309 114 57 chr2 15196925 15197100 -238059483 - MIR SINE MIR -59 203 19 1840 148 143 13 chr2 15197191 15197570 -238059013 + MSTA LTR MaLR 1 428 0 231 61 0 0 chr2 15197693 15197726 -238058857 + (TG)n Simple_repeat Simple_repeat 2 34 0 755 160 0 30 chr2 15197895 15198026 -238058557 + FLAM_C SINE Alu 1 127 -16 554 151 123 84 chr2 15201226 15201405 -238055178 - MER21A LTR ERV1 0 931 746 277 267 12 12 chr2 15201403 15201489 -238055094 - MLT2A2 LTR ERVL -175 278 193 * 187 317 0 87 chr2 15201538 15201642 -238054941 - L2 LINE L2 -164 3108 3014 261 365 33 43 chr2 15201766 15201977 -238054606 - L2 LINE L2 -556 2758 2550 2040 171 35 29 chr2 15202493 15203044 -238053539 + MLT2A2 LTR ERVL 1 554 0 1963 146 58 22 chr2 15203904 15204266 -238052317 + THE1C LTR MaLR 1 375 0 2668 129 21 5 chr2 15204266 15204748 -238051835 + THE1C-int LTR MaLR 1 486 -1150 1300 102 5 15 chr2 15204757 15204954 -238051629 + THE1C-int LTR MaLR 1386 1580 0 1833 134 62 56 chr2 15204954 15205286 -238051297 + THE1C LTR MaLR 1 337 -38 2299 91 20 0 chr2 15205286 15205583 -238051000 - AluSq SINE Alu -10 303 1 1833 134 62 56 chr2 15205583 15205623 -238050960 + THE1C LTR MaLR 337 375 0 2080 24 0 0 chr2 15208478 15208728 -238047855 - L1P LINE L1 -1976 4170 3921 1186 0 0 0 chr2 15208728 15208890 -238047693 + L1PA3 LINE L1 6014 6176 0 516 254 90 25 chr2 15210503 15210747 -238045836 + MER74B LTR ERVL 363 622 0 1001 172 78 16 chr2 15210892 15211148 -238045435 - MER46C DNA MER2_type -39 299 28 1488 210 7 23 chr2 15212103 15212413 -238044170 - AluJo SINE Alu -7 305 1 25 75 0 0 chr2 15213090 15213143 -238043440 + AT_rich Low_complexity Low_complexity 1 53 0 363 250 19 28 chr2 15213389 15213497 -238043086 - L1MC/D LINE L1 -2124 5684 5578 582 244 54 66 chr2 15213842 15213908 -238042675 + L1ME LINE L1 39 104 -5966 1936 151 0 22 chr2 15213908 15214227 -238042356 + AluSx SINE Alu 1 312 0 582 244 54 66 chr2 15214227 15214418 -238042165 + L1ME LINE L1 104 293 -5777 1359 228 84 39 chr2 15214453 15214988 -238041595 + L1ME2 LINE L1 5579 6137 -27 25 0 0 0 chr2 15215934 15215959 -238040624 + AT_rich Low_complexity Low_complexity 1 25 0 33504 86 7 10 chr2 15216091 15222268 -238034315 + L1PA6 LINE L1 11 6154 0 21 36 0 0 chr2 15222799 15222827 -238033756 + AT_rich Low_complexity Low_complexity 1 28 0 1377 181 4 20 chr2 15223421 15223718 -238032865 + AluJo SINE Alu 37 329 0 191 349 0 0 chr2 15223781 15223844 -238032739 - MER5B DNA MER1_type -113 65 3 204 269 0 0 chr2 15223999 15224051 -238032532 - MIR SINE MIR -111 151 100 374 324 79 79 chr2 15224242 15224560 -238032023 + L2 LINE L2 2925 3242 -30 2082 148 14 6 chr2 15225015 15225366 -238031217 - Tigger1 DNA MER2_type 0 2418 2065 * 5172 129 22 4 chr2 15225347 15226176 -238030407 - Tigger1 DNA MER2_type -1571 847 4 337 283 128 41 chr2 15226838 15227057 -238029526 + MLT1J LTR MaLR 102 339 -172 251 313 0 20 chr2 15228151 15228250 -238028333 + GA-rich Low_complexity Low_complexity 4 100 0 999 296 152 17 chr2 15229105 15229900 -238026683 + L2 LINE L2 2402 3313 0 24 32 0 0 chr2 15230964 15230995 -238025588 + AT_rich Low_complexity Low_complexity 1 31 0 2266 234 16 45 chr2 15231588 15232233 -238024350 + MLT1E2 LTR MaLR 1 626 0 21 107 0 0 chr2 15232447 15232531 -238024052 + AT_rich Low_complexity Low_complexity 1 84 0 293 327 201 28 chr2 15233154 15233408 -238023175 - L2 LINE L2 -452 2862 2565 406 266 85 40 chr2 15233817 15233994 -238022589 - MIR SINE MIR -1 261 77 2419 74 3 0 chr2 15234022 15234319 -238022264 - AluY SINE Alu -8 303 6 349 327 31 19 chr2 15234430 15234589 -238021994 - L1ME4a LINE L1 0 6121 5961 840 215 54 0 chr2 15234659 15234864 -238021719 - L1ME3A LINE L1 -85 6085 5870 709 158 0 24 chr2 15234908 15235035 -238021548 + FLAM_C SINE Alu 18 141 -2 1558 244 78 10 chr2 15235044 15235729 -238020854 - L1ME3A LINE L1 -355 5815 5086 1047 179 28 32 chr2 15235730 15235948 -238020635 + AluJo SINE Alu 85 301 -11 222 301 68 29 chr2 15236078 15236181 -238020402 + L2 LINE L2 3146 3252 -61 2003 131 7 0 chr2 15236288 15236579 -238020004 + AluSg SINE Alu 1 293 -17 746 195 0 0 chr2 15236834 15236962 -238019621 + AluJo SINE Alu 7 134 -178 33 56 0 0 chr2 15236964 15237018 -238019565 + AT_rich Low_complexity Low_complexity 1 54 0 650 200 131 0 chr2 15237018 15237127 -238019456 + AluJo SINE Alu 144 278 -34 1222 88 0 6 chr2 15237127 15237298 -238019285 + L1PB1 LINE L1 5980 6149 -2 650 200 131 0 chr2 15237298 15237333 -238019250 + AluJo SINE Alu 278 307 -5 405 39 0 0 chr2 15238497 15238548 -238018035 + (CA)n Simple_repeat Simple_repeat 2 52 0 1783 163 0 17 chr2 15238564 15238858 -238017725 + AluJo SINE Alu 1 289 -23 253 378 51 10 chr2 15239090 15239188 -238017395 - L2 LINE L2 -30 3242 3141 2451 267 88 77 chr2 15239328 15240818 -238015765 - L2 LINE L2 0 3313 1812 1844 176 0 14 chr2 15240940 15241276 -238015307 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 15241429 15241454 -238015129 + AT_rich Low_complexity Low_complexity 1 25 0 281 262 58 58 chr2 15242011 15242120 -238014463 + L1ME4a LINE L1 5672 5780 -341 247 75 0 38 chr2 15242120 15242173 -238014410 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 281 262 58 58 chr2 15242173 15242338 -238014245 + L1ME4a LINE L1 5779 5946 -175 32 43 0 0 chr2 15242511 15242557 -238014026 + AT_rich Low_complexity Low_complexity 1 46 0 228 224 17 0 chr2 15243441 15243499 -238013084 - L1ME3A LINE L1 -1158 4988 4930 1354 190 42 98 chr2 15243562 15244088 -238012495 + L1M4 LINE L1 5009 5463 -721 13694 110 9 3 chr2 15244088 15246969 -238009614 + L1PA8A LINE L1 3230 6122 -9 1354 190 42 98 chr2 15246969 15247269 -238009314 + L1M4 LINE L1 5463 5778 -406 226 222 0 0 chr2 15249419 15249473 -238007110 + MER3 DNA MER1_type 37 90 -119 * 399 125 0 0 chr2 15249436 15249508 -238007075 - MER3 DNA MER1_type -6 203 132 846 159 30 0 chr2 15249508 15249640 -238006943 + AluSq/x SINE Alu 1 136 -176 580 247 7 27 chr2 15249640 15249790 -238006793 - MER3 DNA MER1_type -62 147 1 25 0 0 0 chr2 15249926 15249951 -238006632 + AT_rich Low_complexity Low_complexity 1 25 0 886 279 57 84 chr2 15250510 15251231 -238005352 + L1ME3A LINE L1 5293 6005 -165 1931 135 14 3 chr2 15251231 15251520 -238005063 + AluSx SINE Alu 1 292 -20 886 279 57 84 chr2 15251520 15251667 -238004916 + L1ME3A LINE L1 6005 6155 -15 306 0 0 0 chr2 15251707 15251741 -238004842 + (CA)n Simple_repeat Simple_repeat 1 34 0 3378 179 20 10 chr2 15252148 15252845 -238003738 - MER50 LTR ERV1 -23 711 8 207 234 21 0 chr2 15253957 15254004 -238002579 + MIR SINE MIR 144 191 -71 2029 190 69 9 chr2 15254521 15254958 -238001625 + MER31B LTR ERV1 4 466 0 234 0 0 0 chr2 15255156 15255182 -238001401 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2288 148 59 5 chr2 15255347 15255753 -238000830 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr2 15255805 15255826 -238000757 + AT_rich Low_complexity Low_complexity 1 21 0 852 192 36 60 chr2 15256723 15257025 -237999558 + MER31A LTR ERV1 1 295 -190 774 159 62 11 chr2 15257110 15257286 -237999297 + MER93b LTR ERV1 189 373 0 389 109 0 0 chr2 15257286 15257341 -237999242 + MER31A LTR ERV1 360 414 -71 501 112 31 71 chr2 15257363 15257461 -237999122 - AluJb SINE Alu -179 133 40 2281 167 37 90 chr2 15257620 15258219 -237998364 + LTR35 LTR ERV1 1 567 -51 225 226 0 0 chr2 15258219 15258272 -237998311 + (TG)n Simple_repeat Simple_repeat 1 53 0 1613 214 0 0 chr2 15258286 15258580 -237998003 - AluJo SINE Alu -18 294 1 28 71 0 0 chr2 15259393 15259449 -237997134 + AT_rich Low_complexity Low_complexity 1 56 0 235 283 151 28 chr2 15259561 15259667 -237996916 + L2 LINE L2 3175 3293 -20 2804 137 28 8 chr2 15259670 15260166 -237996417 - Tigger3b DNA MER2_type 0 1231 726 1379 216 0 51 chr2 15260189 15260485 -237996098 - AluJo SINE Alu -31 281 1 2447 148 81 6 chr2 15260496 15261015 -237995568 - Tigger3b DNA MER2_type -656 575 18 2227 122 0 0 chr2 15261066 15261369 -237995214 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr2 15261502 15261523 -237995060 + AT_rich Low_complexity Low_complexity 1 21 0 2376 101 0 16 chr2 15261532 15261850 -237994733 + AluSp SINE Alu 1 313 0 1621 154 0 93 chr2 15262031 15262355 -237994228 + AluJo SINE Alu 1 294 -8 499 225 141 31 chr2 15262578 15262769 -237993814 + MLT2C1 LTR ERVL 13 224 -173 853 139 0 53 chr2 15262776 15262927 -237993656 + FLAM_C SINE Alu 1 143 0 234 273 8 61 chr2 15263020 15263152 -237993431 + MLT2C1 LTR ERVL 336 460 -4 1501 193 30 10 chr2 15263668 15263969 -237992614 + MLT1F1 LTR MaLR 85 391 -176 377 289 65 107 chr2 15263964 15264086 -237992497 + MLT1G LTR MaLR 52 178 -377 * 2282 94 7 0 chr2 15264086 15264383 -237992200 + AluSp SINE Alu 1 299 -14 377 289 65 107 chr2 15264383 15264786 -237991797 + MLT1G LTR MaLR 178 555 0 288 281 161 45 chr2 15265230 15265409 -237991174 - MIR SINE MIR -51 211 14 291 290 113 61 chr2 15265753 15265984 -237990599 + MIR SINE MIR 14 256 -6 337 113 62 1 chr2 15266227 15266311 -237990272 + Alu SINE Alu 242 290 -12 549 216 134 47 chr2 15267286 15267457 -237989126 - MIR SINE MIR -29 233 48 269 261 23 11 chr2 15267647 15267735 -237988848 - L1MC4 LINE L1 -14 8028 7940 280 227 9 18 chr2 15267809 15267919 -237988664 + (CATATA)n Simple_repeat Simple_repeat 2 110 0 512 189 0 0 chr2 15267923 15268018 -237988565 - L1MC4 LINE L1 -126 7916 7822 2372 101 0 0 chr2 15268027 15268333 -237988250 - AluSg SINE Alu -4 306 1 356 294 39 20 chr2 15268554 15268707 -237987876 + MLT1I LTR MaLR 93 248 -161 186 133 0 0 chr2 15269642 15269672 -237986911 + (CA)n Simple_repeat Simple_repeat 2 31 0 654 205 25 56 chr2 15269973 15270134 -237986449 + MIR SINE MIR 17 172 -90 1660 156 7 18 chr2 15270144 15270426 -237986157 - AluJb SINE Alu -27 285 7 2775 89 18 8 chr2 15270426 15270819 -237985764 + THE1C-int LTR MaLR 1184 1580 0 1795 151 51 38 chr2 15270819 15271189 -237985394 + THE1C LTR MaLR 1 375 0 232 250 200 0 chr2 15271192 15271272 -237985311 + MIR SINE MIR 163 258 -4 247 316 113 38 chr2 15271349 15271482 -237985101 - MIR SINE MIR -81 181 39 446 236 161 35 chr2 15271763 15271937 -237984646 - MIR SINE MIR -1 261 66 1758 185 0 0 chr2 15273180 15273466 -237983117 - AluJb SINE Alu -26 286 1 21 0 0 0 chr2 15274227 15274248 -237982335 + AT_rich Low_complexity Low_complexity 1 21 0 368 275 47 62 chr2 15274629 15274822 -237981761 - MIR SINE MIR -5 257 68 350 323 116 12 chr2 15275536 15275787 -237980796 + L1MC4a LINE L1 5633 5909 -1899 434 304 111 37 chr2 15276755 15277133 -237979450 + L1MB5 LINE L1 4976 5381 -765 250 239 0 0 chr2 15277223 15277269 -237979314 + L1MB5 LINE L1 5589 5634 -2174 722 239 86 14 chr2 15277287 15277496 -237979087 - MIR SINE MIR -37 225 2 2258 140 0 19 chr2 15278287 15278659 -237977924 - MER47A DNA MER2_type -1 365 1 25 31 0 0 chr2 15278772 15278804 -237977779 + AT_rich Low_complexity Low_complexity 1 32 0 643 151 0 0 chr2 15279774 15279880 -237976703 + L1MB5 LINE L1 6069 6174 0 21 36 0 0 chr2 15279928 15279956 -237976627 + AT_rich Low_complexity Low_complexity 1 28 0 727 137 7 72 chr2 15280062 15280215 -237976368 - FLAM_C SINE Alu 0 143 1 28 86 0 0 chr2 15280341 15280411 -237976172 + AT_rich Low_complexity Low_complexity 1 70 0 28 0 0 0 chr2 15281161 15281189 -237975394 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr2 15281319 15281349 -237975234 + AT_rich Low_complexity Low_complexity 1 30 0 309 344 120 32 chr2 15282119 15282722 -237973861 - L2 LINE L2 -3 3269 2596 21 36 0 0 chr2 15283001 15283029 -237973554 + AT_rich Low_complexity Low_complexity 1 28 0 245 305 11 74 chr2 15284076 15284171 -237972412 + MIR SINE MIR 51 139 -69 204 385 33 11 chr2 15286082 15286173 -237970410 - L2 LINE L2 -187 3085 2993 233 306 93 0 chr2 15286408 15286516 -237970067 + L2 LINE L2 2219 2336 -978 237 119 68 34 chr2 15286582 15286641 -237969942 - L1M LINE L1 -800 5378 5318 2056 82 45 0 chr2 15286919 15287186 -237969397 - AluY SINE Alu -16 295 17 1804 159 0 10 chr2 15287474 15287770 -237968813 - AluJb SINE Alu -19 293 1 636 253 73 4 chr2 15287894 15288127 -237968456 - L1M4 LINE L1 -1538 4608 4360 1981 237 16 20 chr2 15288237 15288786 -237967797 + L1ME3A LINE L1 5416 5962 -208 608 263 17 17 chr2 15289030 15289205 -237967378 + LTR16C LTR ERVL 287 461 -30 243 263 0 62 chr2 15289226 15289306 -237967277 + L1ME3A LINE L1 6041 6115 -55 200 238 0 24 chr2 15289339 15289381 -237967202 - MIR SINE MIR -137 71 31 258 223 233 0 chr2 15289478 15289581 -237967002 + L1ME1 LINE L1 53 179 -6217 529 125 0 0 chr2 15289593 15289673 -237966910 - AluJ/FRAM SINE Alu -11 301 222 1106 278 147 8 chr2 15289673 15290163 -237966420 + L1ME1 LINE L1 191 748 -5648 * 1356 250 32 22 chr2 15290160 15290564 -237966019 + L1MA9 LINE L1 5867 6274 -38 1305 254 65 80 chr2 15290583 15290668 -237965915 + L1ME1 LINE L1 738 823 -5573 2232 87 14 3 chr2 15290668 15290957 -237965626 + AluSg SINE Alu 1 292 -18 1305 254 65 80 chr2 15290957 15292112 -237964471 + L1ME1 LINE L1 823 1960 -4436 1821 226 73 35 chr2 15292179 15293925 -237962658 + L1ME1 LINE L1 4282 6095 -140 1479 282 20 56 chr2 15293298 15293997 -237962586 + L1MB8 LINE L1 5574 6247 0 * 24 0 0 0 chr2 15294007 15294031 -237962552 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr2 15295629 15295669 -237960914 + AT_rich Low_complexity Low_complexity 1 40 0 357 274 335 6 chr2 15295885 15296064 -237960519 - MIR SINE MIR -6 256 19 25 0 0 0 chr2 15297178 15297203 -237959380 + AT_rich Low_complexity Low_complexity 1 25 0 198 71 0 0 chr2 15297926 15297954 -237958629 + (TG)n Simple_repeat Simple_repeat 2 29 0 1591 160 52 4 chr2 15297956 15298266 -237958317 - AluJo SINE Alu 0 323 1 1026 268 208 34 chr2 15299461 15300473 -237956110 + HAL1 LINE L1 1243 2430 -77 330 221 19 91 chr2 15300579 15300733 -237955850 - L1MC4 LINE L1 -408 7634 7492 326 296 31 0 chr2 15300712 15300810 -237955773 - L1MC5 LINE L1 -548 7413 7313 * 492 291 93 32 chr2 15300796 15301109 -237955474 - L1MC4a LINE L1 -393 7415 7084 244 230 27 27 chr2 15301201 15301275 -237955308 + GA-rich Low_complexity Low_complexity 2 75 0 296 289 0 13 chr2 15301279 15301355 -237955228 - MIR3 SINE MIR -49 159 85 239 325 0 0 chr2 15302778 15302855 -237953728 + MIR SINE MIR 124 200 -62 1864 133 32 52 chr2 15303197 15303544 -237953039 - MER2 DNA MER2_type -1 343 4 324 0 0 0 chr2 15303700 15303736 -237952847 + (TG)n Simple_repeat Simple_repeat 2 37 0 887 144 0 0 chr2 15303744 15303876 -237952707 - FLAM_C SINE Alu -1 132 1 866 255 19 14 chr2 15303885 15304093 -237952490 - MIR SINE MIR -25 237 29 2168 122 0 6 chr2 15304336 15304648 -237951935 - AluSx SINE Alu -2 310 1 1460 273 67 34 chr2 15305559 15306956 -237949627 + L1MC/D LINE L1 4278 5734 -748 336 218 168 0 chr2 15306969 15307070 -237949513 + MER3 DNA MER1_type 92 209 0 236 250 11 33 chr2 15307420 15307512 -237949071 + L1ME LINE L1 5410 5499 -671 1961 186 110 22 chr2 15307578 15308040 -237948543 - MLT1D LTR MaLR -2 503 1 296 304 65 6 chr2 15308333 15308501 -237948082 - L1M1 LINE L1 -4528 3037 2860 472 320 110 14 chr2 15308502 15308721 -237947862 + MIR SINE MIR 2 241 -21 716 159 0 16 chr2 15308725 15308851 -237947732 + FLAM_C SINE Alu 1 124 -19 370 366 41 5 chr2 15308911 15309105 -237947478 - L1MEc LINE L1 -4797 1513 1313 1000 295 101 69 chr2 15309138 15310024 -237946559 - L1MEc LINE L1 -4893 1226 313 418 326 40 43 chr2 15311069 15311345 -237945238 - L1MEc LINE L1 -5831 288 14 181 374 44 0 chr2 15311563 15311654 -237944929 - MER5A DNA MER1_type -24 165 71 1017 301 69 6 chr2 15312006 15312368 -237944215 + MLT1I LTR MaLR 25 409 0 1844 209 28 43 chr2 15312541 15313073 -237943510 + MER65B LTR ERV1 1 524 -7 384 376 110 19 chr2 15313098 15313417 -237943166 - L2 LINE L2 0 3272 2925 186 396 38 0 chr2 15313477 15313636 -237942947 - L2 LINE L2 -463 2851 2687 285 297 92 46 chr2 15314164 15314359 -237942224 - L3 LINE CR1 -10 1567 1364 2369 86 0 0 chr2 15314498 15314799 -237941784 + AluSx SINE Alu 1 301 -11 624 297 36 10 chr2 15314895 15315090 -237941493 + MIR SINE MIR 8 207 -55 216 0 0 0 chr2 15315921 15315945 -237940638 + (GA)n Simple_repeat Simple_repeat 2 25 0 2266 101 0 7 chr2 15316357 15316665 -237939918 + AluSx SINE Alu 1 306 -6 207 230 0 150 chr2 15317953 15318053 -237938530 + L2 LINE L2 3223 3307 -6 265 299 133 77 chr2 15318268 15318673 -237937910 - L2 LINE L2 -14 3258 2831 225 0 0 0 chr2 15319171 15319196 -237937387 + (TG)n Simple_repeat Simple_repeat 2 26 0 246 81 0 0 chr2 15319225 15319262 -237937321 + (TG)n Simple_repeat Simple_repeat 2 38 0 774 214 7 7 chr2 15319263 15319417 -237937166 - FAM SINE Alu -17 158 5 2260 107 0 3 chr2 15319547 15319847 -237936736 - AluY SINE Alu -12 299 1 2853 159 56 16 chr2 15321654 15322226 -237934357 - L1MC1 LINE L1 -6 6327 5733 603 176 114 0 chr2 15322231 15322362 -237934221 + L1MC2 LINE L1 6189 6334 -10 225 231 119 90 chr2 15322930 15323064 -237933519 + MIR3 SINE MIR 41 178 -30 34 0 0 0 chr2 15323307 15323341 -237933242 + AT_rich Low_complexity Low_complexity 1 34 0 236 393 8 33 chr2 15323538 15323660 -237932923 - MIR3 SINE MIR -75 133 15 208 239 0 0 chr2 15324367 15324413 -237932170 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 272 292 35 35 chr2 15324591 15324735 -237931848 + MER5B DNA MER1_type 29 172 -6 197 281 171 91 chr2 15325123 15325333 -237931250 + MIR SINE MIR 19 245 -17 181 305 76 47 chr2 15325638 15325874 -237930709 + L2 LINE L2 1935 2177 -1137 532 320 75 9 chr2 15325952 15326180 -237930403 - HAL1 LINE L1 -880 1627 1385 580 275 101 27 chr2 15326190 15326637 -237929946 - HAL1 LINE L1 -1173 1334 855 359 294 122 20 chr2 15326639 15326884 -237929699 - HAL1 LINE L1 -1708 799 530 915 172 43 48 chr2 15327989 15328198 -237928385 + MER3 DNA MER1_type 2 209 0 1277 188 0 52 chr2 15328283 15328533 -237928050 + AluJo SINE Alu 1 237 -75 2167 114 17 0 chr2 15328597 15328894 -237927689 + AluY SINE Alu 1 302 -9 258 243 43 0 chr2 15329020 15329090 -237927493 + MIR3 SINE MIR 133 205 -3 188 324 0 15 chr2 15329324 15329392 -237927191 - L2 LINE L2 -526 2788 2722 204 125 0 0 chr2 15330197 15330229 -237926354 + (ATG)n Simple_repeat Simple_repeat 2 33 0 620 299 60 20 chr2 15330280 15330531 -237926052 - MIR SINE MIR 0 262 2 1976 138 7 7 chr2 15330644 15330942 -237925641 - AluSx SINE Alu -14 298 1 422 328 15 8 chr2 15331279 15331410 -237925173 + L2 LINE L2 3182 3313 0 760 284 34 21 chr2 15332997 15333233 -237923350 + MIR SINE MIR 10 248 -14 1356 157 12 94 chr2 15333650 15333969 -237922614 + AluJo SINE Alu 1 293 -19 203 206 49 39 chr2 15334048 15334150 -237922433 + (CAAGA)n Simple_repeat Simple_repeat 5 107 0 815 228 86 39 chr2 15335245 15335477 -237921106 - MIR SINE MIR -10 252 10 252 276 14 145 chr2 15336516 15336661 -237919922 + L2 LINE L2 3040 3165 -107 219 296 0 28 chr2 15336732 15336803 -237919780 + (TGGA)n Simple_repeat Simple_repeat 4 72 0 540 234 24 0 chr2 15337038 15337162 -237919421 + FLAM_A SINE Alu 1 127 -6 21 0 0 0 chr2 15337588 15337609 -237918974 + AT_rich Low_complexity Low_complexity 1 21 0 1503 266 49 67 chr2 15338240 15338849 -237917734 + L1MEc LINE L1 11 605 -5791 2234 86 3 25 chr2 15338849 15339164 -237917419 + AluY SINE Alu 1 308 -3 1503 266 49 67 chr2 15339164 15339314 -237917269 + L1MEc LINE L1 605 756 -5640 44111 37 1 4 chr2 15339336 15345503 -237911080 + L1PA3 LINE L1 2 6154 -1 2339 247 74 43 chr2 15345528 15346869 -237909714 + L1MEc LINE L1 758 2219 -4177 302 253 21 77 chr2 15346929 15347123 -237909460 + L1MEc LINE L1 2178 2360 -4036 572 266 148 5 chr2 15347275 15347478 -237909105 + L1ME3A LINE L1 5937 6168 -2 1135 199 77 106 chr2 15347623 15347999 -237908584 - MLT1A1 LTR MaLR 0 365 1 228 227 162 3 chr2 15348242 15348323 -237908260 - MIR SINE MIR -56 152 72 32 0 0 0 chr2 15349056 15349088 -237907495 + AT_rich Low_complexity Low_complexity 1 32 0 195 306 16 16 chr2 15350220 15350282 -237906301 + L2 LINE L2 2998 3059 -213 309 109 0 0 chr2 15350860 15350906 -237905677 + (TTCA)n Simple_repeat Simple_repeat 3 48 0 1594 183 7 4 chr2 15350907 15351186 -237905397 - AluJo SINE Alu -32 280 1 1485 161 45 3 chr2 15351814 15352105 -237904478 + L1MB2 LINE L1 5855 6157 -14 2393 52 24 0 chr2 15352153 15352440 -237904143 + AluY SINE Alu 5 298 -13 2441 83 0 0 chr2 15353606 15353908 -237902675 - AluSc SINE Alu -3 306 5 558 126 27 45 chr2 15354182 15354293 -237902290 + L1MD3 LINE L1 7730 7838 -157 2342 78 10 0 chr2 15354745 15355038 -237901545 - AluSx SINE Alu -16 296 1 437 248 44 0 chr2 15355209 15355322 -237901261 + L1MD3 LINE L1 7838 7955 -40 596 243 71 12 chr2 15355413 15355582 -237901001 - MIR SINE MIR 0 262 84 431 256 34 8 chr2 15356293 15356410 -237900173 - L2 LINE L2 0 3313 3194 680 254 68 42 chr2 15356422 15356686 -237899897 - L2 LINE L2 0 3313 3043 513 286 136 14 chr2 15356700 15356980 -237899603 - L2 LINE L2 -144 3169 2856 2294 167 49 5 chr2 15358153 15358561 -237898022 + MSTB LTR MaLR 1 426 0 2186 82 53 0 chr2 15359332 15359614 -237896969 - AluY SINE Alu -14 297 1 201 287 357 6 chr2 15359731 15359888 -237896695 + MIR SINE MIR 50 261 -1 27 29 0 0 chr2 15360926 15360960 -237895623 + AT_rich Low_complexity Low_complexity 1 34 0 404 223 65 50 chr2 15362020 15362159 -237894424 - L2 LINE L2 0 3313 3173 259 270 0 139 chr2 15362299 15362414 -237894169 + L2 LINE L2 3174 3272 0 353 289 155 56 chr2 15362442 15362816 -237893767 - L2 LINE L2 -907 2407 1997 1707 192 0 3 chr2 15362826 15363118 -237893465 + AluJo SINE Alu 1 291 -21 534 319 111 28 chr2 15363119 15363589 -237892994 + L2 LINE L2 725 1233 -2081 533 236 70 79 chr2 15363595 15363938 -237892645 + L1MC5 LINE L1 7556 7895 -66 910 290 112 39 chr2 15363982 15364571 -237892012 + L2 LINE L2 1218 1849 -1465 426 274 105 26 chr2 15364753 15364906 -237891677 + MIR SINE MIR 6 170 -92 366 266 62 0 chr2 15364980 15365093 -237891490 - L2 LINE L2 -5 3308 3189 180 353 163 41 chr2 15365147 15365368 -237891215 + L2 LINE L2 3021 3268 -4 27 29 0 0 chr2 15365636 15365670 -237890913 + AT_rich Low_complexity Low_complexity 1 34 0 1886 173 3 0 chr2 15366492 15366787 -237889796 + AluJb SINE Alu 2 297 -15 2420 50 0 0 chr2 15368933 15369250 -237887333 - L1P LINE L1 -2891 3255 2939 4680 54 0 3 chr2 15369250 15369835 -237886748 + L1PA5 LINE L1 5565 6152 -2 462 271 9 0 chr2 15370281 15370388 -237886195 - L2 LINE L2 -2 3311 3204 1397 120 0 10 chr2 15370608 15370816 -237885767 + AluSq SINE Alu 96 301 -12 1351 236 52 35 chr2 15371452 15371820 -237884763 + MLT1A2 LTR MaLR 1 374 0 438 220 207 7 chr2 15371917 15372067 -237884516 + LTR41 LTR ERVL 8 187 -586 387 276 91 47 chr2 15372511 15372765 -237883818 + LTR41 LTR ERVL 503 767 -6 2075 113 3 0 chr2 15374382 15374696 -237881887 - AluSx SINE Alu 0 315 1 22 80 0 0 chr2 15375762 15375812 -237880771 + AT_rich Low_complexity Low_complexity 1 50 0 2135 114 24 0 chr2 15376276 15376574 -237880009 + AluSg SINE Alu 1 305 -5 2071 96 35 0 chr2 15377104 15377386 -237879197 - AluSx SINE Alu -19 293 2 239 139 0 0 chr2 15377623 15377666 -237878917 - L1ME4a LINE L1 -1 6120 6078 204 228 152 25 chr2 15379672 15379751 -237876832 + L2 LINE L2 3184 3272 0 1708 197 3 3 chr2 15379894 15380198 -237876385 + AluJo SINE Alu 1 304 -8 27 0 0 0 chr2 15380263 15380290 -237876293 + AT_rich Low_complexity Low_complexity 1 27 0 2586 188 12 2 chr2 15380653 15381149 -237875434 - L1MB5 LINE L1 -8 6166 5666 241 213 0 0 chr2 15381402 15381449 -237875134 + MER39 LTR ERV1 1 47 -660 2119 130 76 80 chr2 15381501 15381985 -237874598 + MER39 LTR ERV1 1 554 -153 1672 146 52 4 chr2 15381985 15382253 -237874330 - AluJb SINE Alu -31 281 1 2119 130 76 80 chr2 15382253 15382407 -237874176 + MER39 LTR ERV1 554 707 0 657 142 0 9 chr2 15382654 15382760 -237873823 + MER39 LTR ERV1 598 702 -5 262 321 160 0 chr2 15383000 15383106 -237873477 - L2 LINE L2 -2 3270 3148 861 70 86 0 chr2 15384267 15384395 -237872188 - MER85 DNA T2_type 0 139 1 21 0 0 0 chr2 15385117 15385138 -237871445 + AT_rich Low_complexity Low_complexity 1 21 0 182 345 0 18 chr2 15385371 15385426 -237871157 + MIR SINE MIR 54 107 -155 993 220 72 5 chr2 15387189 15387412 -237869171 + MER8 DNA MER2_type 2 239 0 224 295 13 0 chr2 15389308 15389386 -237867197 + GA-rich Low_complexity Low_complexity 2 80 0 379 279 74 0 chr2 15389788 15389910 -237866673 + Charlie8 DNA MER1_type 136 266 -2151 301 254 0 0 chr2 15389991 15390054 -237866529 + Charlie8 DNA MER1_type 2343 2405 -12 275 357 39 31 chr2 15390462 15390591 -237865992 - MIR3 SINE MIR -53 155 26 27 29 0 0 chr2 15390873 15390907 -237865676 + AT_rich Low_complexity Low_complexity 1 34 0 1011 225 76 86 chr2 15390919 15391290 -237865293 + MER39 LTR ERV1 1 536 -171 2539 71 0 0 chr2 15391290 15391601 -237864982 + AluY SINE Alu 1 311 0 1011 225 76 86 chr2 15391601 15391772 -237864811 + MER39 LTR ERV1 536 707 0 410 220 85 51 chr2 15391948 15392125 -237864458 - L1MC5 LINE L1 -64 7897 7715 1945 148 0 14 chr2 15392297 15392594 -237863989 - AluJb SINE Alu -17 295 3 1802 155 57 35 chr2 15392770 15393137 -237863446 + THE1C LTR MaLR 1 375 0 2075 139 3 0 chr2 15393221 15393522 -237863061 + AluSx SINE Alu 1 302 -10 2036 116 23 0 chr2 15393658 15393959 -237862624 - AluSx SINE Alu -4 308 1 335 323 32 38 chr2 15394084 15394242 -237862341 + MIR SINE MIR 57 213 -49 387 203 138 89 chr2 15395076 15395367 -237861216 + L1MC5 LINE L1 7223 7527 -434 3206 191 46 10 chr2 15395578 15395909 -237860674 + L1MB8 LINE L1 5444 5762 -416 378 91 0 0 chr2 15395909 15395964 -237860619 + (CA)n Simple_repeat Simple_repeat 2 56 0 3206 191 46 10 chr2 15395964 15396333 -237860250 + L1MB8 LINE L1 5762 6169 -9 343 216 10 10 chr2 15396413 15396515 -237860068 + GA-rich Low_complexity Low_complexity 4 105 0 885 340 135 36 chr2 15396583 15397574 -237859009 - L2 LINE L2 -29 3284 2196 24 0 0 70 chr2 15398173 15398216 -237858367 + AT_rich Low_complexity Low_complexity 1 40 0 4577 88 22 12 chr2 15398260 15398419 -237858164 + L1PA13 LINE L1 5482 5638 -525 1552 118 226 47 chr2 15398419 15398582 -237858001 + MSTA LTR MaLR 1 133 -295 192 40 0 0 chr2 15398582 15398607 -237857976 + (TC)n Simple_repeat Simple_repeat 1 25 0 1552 118 226 47 chr2 15398607 15398765 -237857818 + MSTA LTR MaLR 133 261 -167 2074 138 10 3 chr2 15398765 15399063 -237857520 - AluSx SINE Alu -12 300 1 1552 118 226 47 chr2 15399063 15399103 -237857480 + MSTA LTR MaLR 261 428 0 4577 88 22 12 chr2 15399103 15399610 -237856973 + L1PA13 LINE L1 5638 6155 -8 379 228 0 142 chr2 15400178 15400305 -237856278 - L2 LINE L2 -7 3306 3198 342 0 0 0 chr2 15400338 15400376 -237856207 + (CA)n Simple_repeat Simple_repeat 1 38 0 2255 58 51 7 chr2 15400489 15400781 -237855802 + AluY SINE Alu 1 305 -6 1958 106 73 0 chr2 15400855 15401130 -237855453 + AluY SINE Alu 1 295 -16 899 10 0 0 chr2 15401420 15401520 -237855063 - AluYa5/8 SINE Alu -7 303 204 1095 155 0 0 chr2 15401604 15401765 -237854818 - AluJb SINE Alu -18 294 134 5406 129 36 26 chr2 15402186 15403125 -237853458 - Tigger3b DNA MER2_type 0 1231 284 319 231 0 15 chr2 15403125 15403190 -237853393 - MER2 DNA MER2_type 0 345 282 * 442 287 0 0 chr2 15403165 15403259 -237853324 - MER8 DNA MER2_type -60 179 86 239 256 16 74 chr2 15403774 15403895 -237852688 - L1ME3 LINE L1 -8 6154 6041 1302 165 30 0 chr2 15404544 15404781 -237851802 + L1M4 LINE L1 5485 5728 -446 202 318 0 11 chr2 15405869 15405957 -237850626 + A-rich Low_complexity Low_complexity 4 90 0 480 285 66 41 chr2 15406097 15406490 -237850093 + HAL1b LINE L1 231 633 -715 1451 252 150 4 chr2 15406724 15407176 -237849407 - L2 LINE L2 -1405 1909 1392 196 240 0 20 chr2 15407379 15407429 -237849154 - MIR SINE MIR -55 207 159 542 179 5 122 chr2 15408359 15408555 -237848028 - L1MC4 LINE L1 -4 8038 7866 1739 103 4 0 chr2 15408557 15408791 -237847792 + AluSq SINE Alu 1 235 -78 217 211 18 18 chr2 15409107 15409164 -237847419 + MIR SINE MIR 98 154 -108 2394 73 0 0 chr2 15409694 15409983 -237846600 - AluSg SINE Alu -21 289 1 311 306 150 17 chr2 15410049 15410229 -237846354 + MLT1I LTR MaLR 3 206 -203 248 243 108 0 chr2 15410455 15410529 -237846054 + L2 LINE L2 3232 3313 0 578 249 76 35 chr2 15410572 15410769 -237845814 + MIR SINE MIR 48 252 -10 1844 187 70 41 chr2 15412247 15412706 -237843877 + MLT1D LTR MaLR 1 472 -33 288 263 17 25 chr2 15413317 15413435 -237843148 + L1MC5 LINE L1 7329 7445 -516 1566 194 10 17 chr2 15413542 15413831 -237842752 + AluJo SINE Alu 1 287 -25 1041 207 37 43 chr2 15413842 15414141 -237842442 + L1MC5 LINE L1 7617 7913 -48 34 84 0 0 chr2 15414473 15414556 -237842027 + AT_rich Low_complexity Low_complexity 1 83 0 231 287 81 11 chr2 15414977 15415064 -237841519 - L2 LINE L2 -23 3249 3157 530 146 125 0 chr2 15415198 15415294 -237841289 + AluJb SINE Alu 81 188 -124 368 179 51 0 chr2 15415294 15415372 -237841211 + AluS SINE Alu 220 301 0 320 267 109 63 chr2 15415917 15416138 -237840445 + L1ME LINE L1 4466 4696 -1450 2032 109 3 3 chr2 15416296 15416579 -237840004 + AluSx SINE Alu 21 303 -9 230 239 132 13 chr2 15416579 15416738 -237839845 + L1ME LINE L1 5212 5389 -757 227 284 31 0 chr2 15416787 15416859 -237839724 + L1ME LINE L1 5521 5586 -535 970 97 0 19 chr2 15416972 15417126 -237839457 - L1PA15 LINE L1 -1 6164 6014 1129 203 166 66 chr2 15417460 15417840 -237838743 - Tigger5 DNA MER2_type 0 2323 1 2281 115 25 27 chr2 15418506 15418871 -237837712 - THE1B LTR MaLR 0 364 1 1604 144 20 52 chr2 15419265 15419571 -237837012 - AluJb SINE Alu -7 305 10 463 143 13 0 chr2 15419578 15419655 -237836928 - MER5A DNA MER1_type -111 78 1 1544 212 0 14 chr2 15419955 15420252 -237836331 + AluJb SINE Alu 1 293 -19 1180 195 113 13 chr2 15420347 15420649 -237835934 - MER58B DNA MER1_type -1 340 9 245 337 163 12 chr2 15420688 15420854 -237835729 + MIR SINE MIR 66 256 -6 214 367 31 20 chr2 15420907 15421005 -237835578 - L2 LINE L2 -27 3245 3147 603 219 0 31 chr2 15421267 15421395 -237835188 - L2 LINE L2 -1 3312 3189 193 306 59 24 chr2 15421442 15421527 -237835056 - L2 LINE L2 0 3272 3185 978 207 32 18 chr2 15421601 15421818 -237834765 + MER58A DNA MER1_type 1 220 -4 438 359 141 23 chr2 15421820 15422475 -237834108 - L2 LINE L2 -433 2881 2150 1099 151 80 0 chr2 15422545 15422784 -237833799 - Tigger2 DNA MER2_type 0 2718 2461 1736 123 14 11 chr2 15422815 15423100 -237833483 - Tigger2 DNA MER2_type -1940 778 493 2219 140 9 3 chr2 15423100 15423442 -237833141 - MER2 DNA MER2_type 0 344 1 2024 142 0 0 chr2 15423467 15423781 -237832802 + AluSx SINE Alu 1 314 0 263 266 11 53 chr2 15424601 15424695 -237831888 + MER5B DNA MER1_type 89 178 0 369 318 8 32 chr2 15425192 15425318 -237831265 - MIR SINE MIR -70 138 16 21 0 0 0 chr2 15425318 15425339 -237831244 + AT_rich Low_complexity Low_complexity 1 21 0 239 236 0 0 chr2 15425359 15425414 -237831169 + L1MB7 LINE L1 6070 6124 -60 243 346 0 0 chr2 15426921 15427025 -237829558 + A-rich Low_complexity Low_complexity 1 104 0 209 267 56 67 chr2 15427076 15427166 -237829417 - L2 LINE L2 -41 3231 3143 1108 245 13 71 chr2 15427183 15427562 -237829021 - MLT1A1 LTR MaLR -8 357 1 373 174 41 6 chr2 15428176 15428348 -237828235 + (TA)n Simple_repeat Simple_repeat 1 178 0 2155 116 3 0 chr2 15428421 15428715 -237827868 + AluSx SINE Alu 1 295 -17 229 229 0 0 chr2 15428716 15428777 -237827806 + L1MC4 LINE L1 6652 6712 -1330 1813 162 26 0 chr2 15429053 15429356 -237827227 + AluJb SINE Alu 1 311 -1 28 0 0 0 chr2 15429888 15429916 -237826667 + AT_rich Low_complexity Low_complexity 1 28 0 226 257 71 7 chr2 15430162 15430302 -237826281 + L1MEd LINE L1 893 1041 -5078 1628 248 75 40 chr2 15430471 15431202 -237825381 + HAL1 LINE L1 1151 1907 -600 294 180 0 0 chr2 15431204 15431254 -237825329 + 5S rRNA rRNA 2 51 -70 255 225 54 18 chr2 15431294 15431405 -237825178 + HAL1 LINE L1 1954 2068 -439 1098 266 88 23 chr2 15431424 15431913 -237824670 + L2 LINE L2 2784 3313 0 2557 63 0 0 chr2 15432043 15432346 -237824237 + AluY SINE Alu 1 303 -8 443 258 55 0 chr2 15432427 15432590 -237823993 + HAL1 LINE L1 2240 2411 -96 23 54 0 0 chr2 15432645 15432682 -237823901 + AT_rich Low_complexity Low_complexity 1 37 0 1100 276 96 19 chr2 15432742 15433386 -237823197 + L1ME3 LINE L1 5258 5951 -211 483 18 0 0 chr2 15433509 15433565 -237823018 + (TG)n Simple_repeat Simple_repeat 2 57 0 257 276 213 8 chr2 15434011 15434138 -237822445 - MIR SINE MIR -6 256 104 2392 235 29 25 chr2 15434514 15434977 -237821606 + L1ME2 LINE L1 5429 5898 -266 1689 170 57 33 chr2 15434977 15435075 -237821508 + MER2 DNA MER2_type 1 95 -249 2195 112 0 3 chr2 15435075 15435422 -237821161 + AluY SINE Alu 1 311 0 1689 170 57 33 chr2 15435422 15435659 -237820924 + MER2 DNA MER2_type 95 344 0 2392 235 29 25 chr2 15435659 15435918 -237820665 + L1ME2 LINE L1 5898 6154 -10 331 320 84 39 chr2 15435957 15436160 -237820423 + L1MC4 LINE L1 7829 8040 -2 601 259 34 94 chr2 15436948 15437331 -237819252 + MER34 LTR ERV1 1 360 -182 321 233 9 8 chr2 15437331 15437559 -237819024 + AluJo SINE Alu 1 297 -5 507 200 37 63 chr2 15437561 15437751 -237818832 + MER34 LTR ERV1 353 537 -5 841 183 26 17 chr2 15437794 15438024 -237818559 + MER33 DNA MER1_type 45 276 -48 610 190 15 103 chr2 15438235 15438430 -237818153 + MER5B DNA MER1_type 1 178 0 255 103 0 0 chr2 15439693 15439732 -237816851 + (CA)n Simple_repeat Simple_repeat 2 40 0 231 303 79 0 chr2 15439829 15439905 -237816678 - L2 LINE L2 -1882 1432 1351 273 346 99 49 chr2 15440162 15440486 -237816097 + L2 LINE L2 2523 2862 -452 2360 97 3 6 chr2 15440548 15440859 -237815724 - AluSx SINE Alu -2 310 1 253 293 186 55 chr2 15440868 15441121 -237815462 + L2 LINE L2 2933 3218 -54 6283 40 7 56 chr2 15441583 15442504 -237814079 + SVA Other Other 534 1386 0 807 285 71 38 chr2 15443059 15443295 -237813288 + L2 LINE L2 2910 3164 -149 1946 142 11 62 chr2 15443295 15443669 -237812914 - THE1A LTR MaLR 0 355 1 807 285 71 38 chr2 15443669 15443800 -237812783 + L2 LINE L2 3164 3289 -24 265 312 152 32 chr2 15443839 15443964 -237812619 + MIR3 SINE MIR 5 144 -64 324 188 0 0 chr2 15444193 15444262 -237812321 + GA-rich Low_complexity Low_complexity 2 70 0 282 274 63 21 chr2 15444311 15444536 -237812047 + L1MDa LINE L1 1315 1656 -4726 1955 140 3 10 chr2 15444566 15444859 -237811724 + AluSg SINE Alu 1 291 -19 1015 259 109 31 chr2 15444874 15445717 -237810866 + L1MDa LINE L1 2893 3971 -2411 2150 117 3 0 chr2 15446282 15446581 -237810002 + AluSx SINE Alu 1 300 -12 337 333 15 15 chr2 15448053 15448185 -237808398 - L2 LINE L2 -23 3290 3159 2093 118 0 3 chr2 15448195 15448484 -237808099 + AluSx SINE Alu 1 288 -24 636 251 80 25 chr2 15448890 15449089 -237807494 - MIR SINE MIR 0 262 53 213 383 25 0 chr2 15449180 15449261 -237807322 - L2 LINE L2 -682 2632 2550 1651 174 11 7 chr2 15449282 15449607 -237806976 + AluJb SINE Alu 1 326 0 1929 134 6 35 chr2 15449706 15450020 -237806563 + AluJo SINE Alu 1 305 -7 276 234 13 0 chr2 15450177 15450254 -237806329 + MIR SINE MIR 183 260 -2 2274 123 0 0 chr2 15450411 15450720 -237805863 - AluSx SINE Alu -1 311 3 223 369 18 27 chr2 15450862 15450973 -237805610 + L2 LINE L2 3155 3264 -8 21 0 0 0 chr2 15451194 15451215 -237805368 + AT_rich Low_complexity Low_complexity 1 21 0 306 265 0 0 chr2 15451641 15451721 -237804862 - MER5A DNA MER1_type -49 140 50 22 35 0 0 chr2 15451892 15451921 -237804662 + AT_rich Low_complexity Low_complexity 1 29 0 347 292 39 0 chr2 15451923 15452053 -237804530 + L1ME4a LINE L1 5548 5682 -439 1175 162 4 40 chr2 15452158 15452386 -237804197 + Tigger2a DNA MER2_type 2 221 -213 2126 65 0 43 chr2 15452629 15452907 -237803676 - AluSc SINE Alu -12 297 32 21 57 0 0 chr2 15453379 15453414 -237803169 + AT_rich Low_complexity Low_complexity 1 35 0 948 175 0 0 chr2 15453519 15453743 -237802840 + CT-rich Low_complexity Low_complexity 1 224 0 368 366 8 0 chr2 15454266 15454400 -237802183 + L1MEd LINE L1 43 177 -5942 399 302 74 41 chr2 15454453 15454914 -237801669 + L1MEd LINE L1 269 881 -5238 1044 185 12 0 chr2 15454940 15455113 -237801470 + FAM SINE Alu 1 175 0 206 133 0 44 chr2 15455906 15455951 -237800632 + (CATA)n Simple_repeat Simple_repeat 2 44 0 302 292 83 24 chr2 15457138 15457306 -237799277 + L1ME4a LINE L1 5931 6108 -13 448 83 0 0 chr2 15457907 15457967 -237798616 - MER1B DNA MER1_type 0 333 274 * 1276 173 0 0 chr2 15457963 15458165 -237798418 - MER1B DNA MER1_type -95 202 1 261 182 0 0 chr2 15458249 15458304 -237798279 + (TA)n Simple_repeat Simple_repeat 1 55 0 1864 144 37 17 chr2 15458625 15458923 -237797660 + AluJb SINE Alu 4 307 -5 239 344 88 32 chr2 15459391 15459516 -237797067 - L2 LINE L2 -5 3267 3136 342 261 0 0 chr2 15460000 15460069 -237796514 + L2 LINE L2 3240 3308 -5 191 59 0 29 chr2 15460080 15460114 -237796469 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 307 289 149 25 chr2 15460310 15460431 -237796152 + L2 LINE L2 3108 3243 -29 209 283 57 104 chr2 15461304 15461410 -237795173 + MIR SINE MIR 59 159 -103 187 333 107 28 chr2 15461511 15461688 -237794895 - L2 LINE L2 -163 3109 2919 1124 165 95 126 chr2 15461715 15462127 -237794456 - MER83 LTR ERV1 0 448 50 548 186 0 26 chr2 15462126 15462239 -237794344 - MER83 LTR ERV1 -338 110 1 * 192 77 0 0 chr2 15462338 15462364 -237794219 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 1172 252 87 57 chr2 15462540 15463102 -237793481 + L2 LINE L2 2727 3311 -2 1458 191 89 0 chr2 15463602 15463884 -237792699 - AluJb SINE Alu -5 307 1 431 295 8 0 chr2 15464372 15464501 -237792082 + MER94 DNA DNA 5 134 0 361 279 119 78 chr2 15464812 15465081 -237791502 + MLT1K LTR MaLR 267 546 -42 1051 160 0 0 chr2 15465211 15465367 -237791216 - AluJ SINE Alu -23 289 134 224 314 265 0 chr2 15465533 15465635 -237790948 - MIR SINE MIR -114 148 20 753 141 0 63 chr2 15465913 15466055 -237790528 - AluJ SINE Alu -169 133 1 186 43 0 0 chr2 15466200 15466223 -237790360 + (CAT)n Simple_repeat Simple_repeat 1 23 0 187 247 52 78 chr2 15466279 15466356 -237790227 - MIR SINE MIR -125 137 63 2236 92 0 33 chr2 15466620 15466926 -237789657 + AluSx SINE Alu 1 296 -16 23 33 0 0 chr2 15467238 15467268 -237789315 + AT_rich Low_complexity Low_complexity 1 30 0 2347 87 0 3 chr2 15467627 15467926 -237788657 + AluSq SINE Alu 1 298 -15 315 301 68 8 chr2 15468075 15468208 -237788375 + L1MC4 LINE L1 7899 8039 -3 2364 71 0 3 chr2 15468494 15468790 -237787793 - AluY SINE Alu -16 295 1 1175 174 4 51 chr2 15468890 15469125 -237787458 + AluJo SINE Alu 85 308 -4 448 303 90 6 chr2 15469187 15469365 -237787218 - L1MEd LINE L1 -5015 1104 912 707 291 123 13 chr2 15469443 15469548 -237787035 - L1MEd LINE L1 -5290 829 737 306 0 0 0 chr2 15469548 15469582 -237787001 + (TG)n Simple_repeat Simple_repeat 2 35 0 707 291 123 13 chr2 15469582 15469858 -237786725 - L1MEd LINE L1 -5382 737 406 185 271 240 0 chr2 15470588 15470684 -237785899 + L2 LINE L2 3154 3272 0 287 380 0 9 chr2 15471574 15471682 -237784901 + MIR SINE MIR 26 132 -130 464 169 36 0 chr2 15471727 15471793 -237784790 + MER67A LTR ERV1 15 83 -460 1752 203 127 56 chr2 15471793 15472384 -237784199 + MER67B LTR ERV1 1 633 -28 202 254 14 86 chr2 15472508 15472624 -237783959 + MER5B DNA MER1_type 15 112 -66 2016 143 3 13 chr2 15472661 15472968 -237783615 - AluSx SINE Alu -8 304 1 2158 220 10 44 chr2 15473235 15473754 -237782829 + LTR31 LTR ERV1 104 604 -15 3105 64 59 7 chr2 15473899 15474320 -237782263 - MLT2A1 LTR ERVL 0 444 2 271 169 0 51 chr2 15474351 15474410 -237782173 + MLT1H1 LTR MaLR 53 108 -447 1555 237 69 98 chr2 15474807 15474903 -237781680 + MER72 LTR ERV1 4 101 -621 2193 99 0 3 chr2 15474903 15475207 -237781376 + AluSx SINE Alu 1 303 0 1555 237 69 98 chr2 15475207 15475728 -237780855 + MER72 LTR ERV1 101 601 -121 1706 148 83 0 chr2 15475728 15475883 -237780700 - AluJb SINE Alu -12 300 159 221 0 0 33 chr2 15475883 15475913 -237780670 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1706 148 83 0 chr2 15475913 15476034 -237780549 - AluJb SINE Alu -153 159 1 1555 237 69 98 chr2 15476034 15476135 -237780448 + MER72 LTR ERV1 601 703 -19 232 308 88 31 chr2 15476433 15476503 -237780080 + L2 LINE L2 1637 1702 -1612 1755 169 10 10 chr2 15476503 15476805 -237779778 + AluJo SINE Alu 1 302 -10 232 308 88 31 chr2 15476805 15476961 -237779622 + L2 LINE L2 1702 1876 -1438 365 268 197 0 chr2 15477152 15477294 -237779289 + MER5A DNA MER1_type 17 186 -3 202 345 180 16 chr2 15477294 15477616 -237778967 + L2 LINE L2 2126 2500 -814 741 183 30 71 chr2 15477875 15478072 -237778511 + MER5A DNA MER1_type 1 189 0 1924 207 131 20 chr2 15478209 15478697 -237777886 + MLT1F LTR MaLR 1 542 0 379 318 15 108 chr2 15478704 15479103 -237777480 + L2 LINE L2 2907 3268 -4 250 121 0 0 chr2 15479246 15479279 -237777304 + MLT1G1 LTR MaLR 1 33 -562 4513 139 20 20 chr2 15479279 15480010 -237776573 + ERVL-D LTR ERVL 4724 5454 -310 281 176 29 0 chr2 15480015 15480083 -237776500 + (TATG)n Simple_repeat Simple_repeat 3 72 0 904 147 0 15 chr2 15480131 15480267 -237776316 - AluJo SINE Alu -178 134 1 1758 123 30 23 chr2 15480267 15480568 -237776015 + ERVL-D LTR ERVL 5447 5749 -15 1933 159 18 95 chr2 15480576 15480647 -237775936 + MLT2D LTR ERVL 1 76 -338 2200 110 7 13 chr2 15480647 15480955 -237775628 + AluSq SINE Alu 1 306 -7 1933 159 18 95 chr2 15480955 15481009 -237775574 + MLT2D LTR ERVL 76 133 -281 1766 150 11 25 chr2 15481009 15481295 -237775288 + AluJb SINE Alu 11 292 -20 1933 159 18 95 chr2 15481295 15481609 -237774974 + MLT2D LTR ERVL 133 407 -7 1876 163 3 3 chr2 15481666 15481960 -237774623 + AluJo SINE Alu 3 296 -16 784 260 218 25 chr2 15481968 15482404 -237774179 + MLT1G3 LTR MaLR 1 595 0 1861 237 35 51 chr2 15483550 15484098 -237772485 + MLT1F LTR MaLR 1 539 -3 1637 264 57 22 chr2 15484105 15484560 -237772023 - MLT1J LTR MaLR -2 509 39 1520 256 70 25 chr2 15484695 15485223 -237771360 + MLT1H1 LTR MaLR 3 554 -1 1471 179 13 42 chr2 15486506 15486616 -237769967 - AluJb SINE Alu -14 298 186 1859 73 0 45 chr2 15486616 15486863 -237769720 + AluY SINE Alu 60 295 -16 1471 179 13 42 chr2 15486863 15487059 -237769524 - AluJb SINE Alu -126 186 1 1177 199 61 101 chr2 15487103 15487479 -237769104 + MLT1A1 LTR MaLR 1 361 -4 2341 80 0 3 chr2 15487813 15488099 -237768484 - AluSx SINE Alu -27 285 1 581 131 180 0 chr2 15488121 15488243 -237768340 - L1MB7 LINE L1 0 6184 6041 1849 153 14 4 chr2 15489610 15489891 -237766692 - AluJo SINE Alu -28 284 1 923 241 36 5 chr2 15490208 15490432 -237766151 - MIR SINE MIR -26 236 6 946 124 0 0 chr2 15490433 15490570 -237766013 - AluSg/x SINE Alu -9 303 167 2336 80 10 0 chr2 15490578 15490755 -237765828 - AluSg SINE Alu -5 305 122 279 0 0 0 chr2 15490755 15490786 -237765797 + (TG)n Simple_repeat Simple_repeat 2 32 0 2336 80 10 0 chr2 15490786 15490910 -237765673 - AluSg SINE Alu -188 122 1 262 306 99 0 chr2 15491013 15491124 -237765459 + MIR SINE MIR 51 172 -90 1875 104 0 4 chr2 15492774 15493024 -237763559 - AluSx SINE Alu -30 282 34 2220 107 10 10 chr2 15493631 15493939 -237762644 + AluY SINE Alu 2 309 -2 437 256 152 5 chr2 15494647 15494838 -237761745 - MIR SINE MIR -24 238 20 1795 168 3 7 chr2 15495713 15496010 -237760573 - AluJo SINE Alu -4 308 13 22 0 0 0 chr2 15497943 15497965 -237758618 + AT_rich Low_complexity Low_complexity 1 22 0 395 365 109 8 chr2 15498209 15498604 -237757979 + L3 LINE CR1 1098 1532 -45 2200 95 0 47 chr2 15499105 15499448 -237757135 - AluSx SINE Alu 0 312 1 270 276 125 30 chr2 15499678 15499910 -237756673 + L1 LINE L1 4763 5016 -1130 3055 181 41 5 chr2 15500008 15500572 -237756011 - MER21B-int LTR ERV1 -2914 3844 3261 915 54 0 0 chr2 15500572 15500683 -237755900 - AluY SINE Alu 0 311 201 1420 193 16 0 chr2 15500686 15500929 -237755654 - MER21B-int LTR ERV1 -3944 247 1 303 256 24 12 chr2 15500979 15501061 -237755522 - MER21B LTR ERV1 -54 809 727 1998 173 106 3 chr2 15501133 15501502 -237755081 - MER21B LTR ERV1 -128 735 329 1966 119 12 44 chr2 15502527 15502846 -237753737 - AluSx SINE Alu -3 309 1 1008 305 72 4 chr2 15504460 15505051 -237751532 - L2 LINE L2 -9 3304 2659 1368 249 150 43 chr2 15505053 15505767 -237750816 - L2 LINE L2 -1121 2193 1404 858 233 89 21 chr2 15506321 15506557 -237750026 - MIR SINE MIR 0 262 11 735 190 6 62 chr2 15506655 15506834 -237749749 - FRAM SINE Alu -14 162 1 1481 183 119 4 chr2 15507422 15507690 -237748893 - AluJb SINE Alu -13 299 1 483 102 8 161 chr2 15508040 15508082 -237748501 - L1MB7 LINE L1 -30 6154 6107 2142 114 7 3 chr2 15508082 15508379 -237748204 + AluSx SINE Alu 1 298 -14 483 102 8 161 chr2 15508379 15508454 -237748129 - L1MB7 LINE L1 -77 6107 6055 887 175 35 23 chr2 15508499 15508670 -237747913 - FAM SINE Alu -4 45 1 1729 181 16 0 chr2 15509763 15510066 -237746517 - AluJo SINE Alu -4 308 1 1114 198 54 7 chr2 15510066 15510344 -237746239 - L1M4 LINE L1 -948 5198 4908 6846 60 9 42 chr2 15510717 15512022 -237744561 - SVA Other Other -520 1386 432 5951 75 27 18 chr2 15512036 15512890 -237743693 - SVA Other Other -520 866 5 25 0 0 0 chr2 15513014 15513039 -237743544 + AT_rich Low_complexity Low_complexity 1 25 0 1989 108 63 7 chr2 15513669 15513956 -237742627 - AluSq SINE Alu -10 303 1 819 211 128 40 chr2 15514290 15514634 -237741949 + MLT1A1 LTR MaLR 1 396 0 289 227 30 0 chr2 15515269 15515335 -237741248 + L2 LINE L2 3227 3294 -19 207 0 0 0 chr2 15515720 15515743 -237740840 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1972 112 18 0 chr2 15515746 15515898 -237740685 - AluSx SINE Alu -30 282 121 225 0 0 0 chr2 15515898 15515923 -237740660 + (TG)n Simple_repeat Simple_repeat 2 26 0 1972 112 18 0 chr2 15515923 15516047 -237740536 - AluSx SINE Alu -191 121 1 464 238 69 48 chr2 15516061 15516250 -237740333 - MIR SINE MIR 0 262 70 231 307 92 26 chr2 15516389 15516542 -237740041 + MIR SINE MIR 100 262 0 427 251 114 43 chr2 15516579 15516790 -237739793 - MIR SINE MIR -4 258 33 21 0 0 0 chr2 15516938 15516959 -237739624 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr2 15517309 15517347 -237739236 + AT_rich Low_complexity Low_complexity 1 38 0 1508 179 61 7 chr2 15518160 15518456 -237738127 - MER52A LTR ERV1 0 1755 1444 * 2222 204 131 14 chr2 15518442 15518947 -237737636 - MER52A LTR ERV1 -990 765 202 268 247 72 10 chr2 15519292 15519389 -237737194 - MER52A LTR ERV1 -1652 103 1 254 229 71 0 chr2 15519836 15519906 -237736677 - MIR SINE MIR -112 150 76 23 0 0 0 chr2 15519988 15520011 -237736572 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr2 15520638 15520668 -237735915 + AT_rich Low_complexity Low_complexity 1 30 0 1982 120 20 23 chr2 15521142 15521441 -237735142 - AluSq SINE Alu -15 298 1 2176 135 0 3 chr2 15521485 15521789 -237734794 - AluSx SINE Alu -9 303 1 1054 110 30 0 chr2 15521986 15522150 -237734433 - L1MB3 LINE L1 -1 6182 6014 553 235 80 44 chr2 15523913 15524138 -237732445 + L1M4 LINE L1 2174 2407 -3739 2226 104 116 0 chr2 15524207 15524543 -237732040 - THE1C LTR MaLR 0 375 1 2297 222 103 37 chr2 15524550 15525276 -237731307 + L1ME2 LINE L1 5381 6154 -10 357 220 59 118 chr2 15525337 15525523 -237731060 + L1MC4 LINE L1 7864 8038 -4 329 280 42 49 chr2 15525528 15525671 -237730912 + L1M4 LINE L1 2475 2616 -3530 329 206 71 52 chr2 15528975 15529130 -237727453 - L1MC4 LINE L1 -2 8040 7883 24 67 0 0 chr2 15530422 15530467 -237726116 + AT_rich Low_complexity Low_complexity 1 45 0 1709 132 0 63 chr2 15531383 15531738 -237724845 - AluJb SINE Alu 0 312 1 358 309 119 12 chr2 15532233 15532401 -237724182 - MIR3 SINE MIR -17 191 6 292 262 0 0 chr2 15532777 15532838 -237723745 + MLT1J LTR MaLR 148 208 -303 916 191 0 11 chr2 15533703 15533886 -237722697 - AluJb SINE Alu -1 311 131 337 335 132 0 chr2 15534381 15534563 -237722020 - L1ME LINE L1 -391 5730 5525 331 265 10 39 chr2 15535445 15535547 -237721036 - MER5A DNA MER1_type -90 99 1 616 228 111 19 chr2 15535721 15535883 -237720700 - MER5B DNA MER1_type -1 177 1 263 257 50 50 chr2 15536134 15536235 -237720348 - MARNA DNA Mariner -73 513 413 811 276 49 11 chr2 15538442 15538697 -237717886 - MIR SINE MIR 0 262 3 240 206 29 73 chr2 15538859 15538927 -237717656 - MIR SINE MIR -55 153 89 2072 130 0 6 chr2 15538935 15539250 -237717333 - AluSq SINE Alu 0 313 1 1889 153 0 13 chr2 15539377 15539691 -237716892 - AluJo SINE Alu -2 310 1 199 284 68 14 chr2 15540590 15540664 -237715919 + L2 LINE L2 3187 3264 -8 1026 220 29 4 chr2 15541068 15541313 -237715270 + L1M4 LINE L1 2479 2729 -3417 1849 201 7 14 chr2 15541316 15541753 -237714830 + L1M4 LINE L1 2813 3246 -2900 306 281 0 12 chr2 15541754 15541836 -237714747 - MIR SINE MIR -150 112 32 429 265 52 22 chr2 15541845 15541981 -237714602 + L2 LINE L2 3132 3271 -1 250 202 67 45 chr2 15543584 15543673 -237712910 - MLT1J LTR MaLR -5 506 416 773 267 34 103 chr2 15543720 15544165 -237712418 - MLT1J LTR MaLR -93 418 5 433 309 88 48 chr2 15544242 15544514 -237712069 - L2 LINE L2 0 3272 2990 886 248 191 51 chr2 15544669 15545186 -237711397 - MLT1K LTR MaLR 0 615 2 323 289 67 30 chr2 15545229 15545364 -237711219 - MIR3 SINE MIR -68 140 1 1263 159 133 30 chr2 15545491 15545761 -237710822 + AluJb SINE Alu 1 298 -14 2244 95 0 0 chr2 15546228 15546532 -237710051 - AluSx SINE Alu -8 304 1 2695 172 42 0 chr2 15546562 15547063 -237709520 + L1MB3 LINE L1 5622 6143 -40 2132 112 0 3 chr2 15547063 15547368 -237709215 - AluSx SINE Alu -8 304 1 528 118 12 0 chr2 15547701 15547786 -237708797 + L1MB8 LINE L1 6087 6172 -6 1503 184 8 15 chr2 15548125 15548392 -237708191 + AluJb SINE Alu 2 266 -46 838 26 26 52 chr2 15548419 15548573 -237708010 + (GGAA)n Simple_repeat Simple_repeat 3 152 0 953 161 0 0 chr2 15549077 15549232 -237707351 + AluSg/x SINE Alu 132 286 -24 473 309 135 32 chr2 15550058 15550340 -237706243 - L3 LINE CR1 -281 1296 986 1889 141 10 7 chr2 15551360 15551657 -237704926 - AluSx SINE Alu -14 298 1 2360 70 0 22 chr2 15551657 15551973 -237704610 - AluY SINE Alu -2 309 1 23 0 0 0 chr2 15551983 15552006 -237704577 + AT_rich Low_complexity Low_complexity 1 23 0 443 305 83 20 chr2 15552509 15552742 -237703841 - MIR SINE MIR -14 248 3 306 296 138 37 chr2 15553200 15553389 -237703194 + MIR SINE MIR 34 241 -21 306 366 18 6 chr2 15555476 15555640 -237700943 - L2 LINE L2 -559 2755 2590 435 296 2 15 chr2 15555798 15555973 -237700610 + MER5A DNA MER1_type 7 178 0 236 274 142 18 chr2 15556012 15556125 -237700458 + L2 LINE L2 3144 3270 -2 712 253 50 0 chr2 15556882 15557080 -237699503 - MER3 DNA MER1_type 0 209 2 1853 126 0 14 chr2 15557247 15557563 -237699020 + AluY SINE Alu 1 312 0 422 218 18 55 chr2 15558137 15558247 -237698336 - LTR67 LTR ERVL -449 108 3 1194 333 42 57 chr2 15558279 15559243 -237697340 + L2 LINE L2 2242 3191 -81 585 302 37 37 chr2 15559298 15559540 -237697043 + MIR SINE MIR 20 261 -1 1079 250 28 20 chr2 15559720 15559972 -237696611 - MIR SINE MIR -8 254 1 871 258 18 28 chr2 15560772 15560989 -237695594 - MIR SINE MIR -41 221 7 223 342 88 44 chr2 15561507 15561621 -237694962 - L3b LINE CR1 -24 1559 1441 2152 80 0 10 chr2 15562888 15563177 -237693406 - AluY SINE Alu -11 300 15 2375 207 103 4 chr2 15563605 15564156 -237692427 + L1MB5 LINE L1 5569 6174 0 205 341 76 8 chr2 15566288 15566449 -237690134 - MIR SINE MIR -50 212 40 443 218 99 10 chr2 15566671 15566772 -237689811 - L2 LINE L2 0 3313 3204 222 179 71 18 chr2 15566766 15566822 -237689761 + MIR SINE MIR 199 257 -5 * 191 392 40 20 chr2 15568050 15568249 -237688334 - L2 LINE L2 -244 3028 2826 207 0 0 0 chr2 15569680 15569703 -237686880 + (T)n Simple_repeat Simple_repeat 1 23 0 2335 82 0 13 chr2 15569721 15570036 -237686547 - AluY SINE Alu 0 311 1 2813 148 19 2 chr2 15570038 15570505 -237686078 - L1M3 LINE L1 -345 5823 5349 309 286 67 9 chr2 15570506 15570611 -237685972 - MIR3 SINE MIR -88 120 10 282 277 40 113 chr2 15571160 15571337 -237685246 + MIR SINE MIR 5 168 -40 212 232 18 36 chr2 15571358 15571414 -237685169 - L2 LINE L2 -14 3299 3245 1982 209 72 59 chr2 15571505 15571551 -237685032 + MLT1F LTR MaLR 1 45 -497 2232 100 3 0 chr2 15571551 15571851 -237684732 - AluSp SINE Alu -12 301 1 1982 209 72 59 chr2 15571851 15572330 -237684253 + MLT1F LTR MaLR 45 533 -9 196 330 17 42 chr2 15572978 15573096 -237683487 - L2 LINE L2 -477 2837 2723 296 311 52 37 chr2 15573368 15573503 -237683080 + MIR SINE MIR 35 171 -91 1506 192 32 3 chr2 15573998 15574310 -237682273 + L1MB8 LINE L1 5852 6172 -6 287 294 49 10 chr2 15574416 15574518 -237682065 - MIR3 SINE MIR -43 165 60 437 305 29 29 chr2 15574884 15575058 -237681525 - MIR3 SINE MIR -23 185 12 333 307 158 8 chr2 15575467 15575594 -237680989 + MIR SINE MIR 47 192 -70 2110 127 7 0 chr2 15575898 15576190 -237680393 - AluSq SINE Alu -19 294 1 2293 107 24 0 chr2 15576637 15576935 -237679648 + AluSx SINE Alu 1 305 -7 286 328 40 56 chr2 15577155 15577280 -237679303 - MIR SINE MIR -66 142 20 840 250 29 41 chr2 15577876 15578120 -237678463 + MIR SINE MIR 22 262 0 1981 66 0 59 chr2 15578366 15578699 -237677884 + L1PA7 LINE L1 5867 6182 0 355 278 8 24 chr2 15578813 15578939 -237677644 + MLT1I LTR MaLR 25 148 -261 619 255 98 0 chr2 15578990 15579143 -237677440 - MER58B DNA MER1_type 0 341 174 418 211 17 51 chr2 15579155 15579277 -237677306 + MER3 DNA MER1_type 6 2335 0 560 245 92 0 chr2 15579288 15579451 -237677132 + MLT1I LTR MaLR 232 409 0 315 372 11 21 chr2 15579451 15579639 -237676944 + L2 LINE L2 2864 3049 -223 5825 59 22 16 chr2 15579711 15580925 -237675658 - SVA Other Other -520 1047 1 2044 178 51 12 chr2 15581872 15582282 -237674301 + MSTB1 LTR MaLR 7 432 0 26 50 0 0 chr2 15583652 15583692 -237672891 + AT_rich Low_complexity Low_complexity 1 40 0 270 305 51 11 chr2 15584153 15584270 -237672313 + MIR SINE MIR 74 193 -42 279 244 100 0 chr2 15584297 15584387 -237672196 - L2 LINE L2 -264 3008 2910 767 207 7 0 chr2 15585236 15585381 -237671202 - MLT1G1 LTR MaLR 0 595 450 2178 75 0 0 chr2 15585418 15585684 -237670899 + AluY SINE Alu 33 298 -13 1119 223 9 0 chr2 15585818 15586038 -237670545 - AluJo SINE Alu 0 312 91 487 296 43 26 chr2 15586053 15586286 -237670297 - MLT1G1-int LTR MaLR -821 550 314 735 264 213 10 chr2 15586441 15586737 -237669846 - MLT1G1 LTR MaLR 0 595 240 355 171 43 0 chr2 15586831 15586901 -237669682 - MLT1G1 LTR MaLR -522 73 1 329 154 0 0 chr2 15586947 15586999 -237669584 + Alu SINE Alu 1 52 -250 * 621 243 26 7 chr2 15586960 15587112 -237669471 + MLT1E3 LTR MaLR 464 618 -6 829 233 37 96 chr2 15587113 15587490 -237669093 - MLT1B LTR MaLR -2 388 34 331 373 24 19 chr2 15587928 15588137 -237668446 - MIR SINE MIR -36 226 17 208 319 44 11 chr2 15588976 15589067 -237667516 - L2 LINE L2 -42 3230 3137 215 325 72 0 chr2 15589221 15589304 -237667279 - MIR SINE MIR -78 184 96 2374 79 0 13 chr2 15590057 15590362 -237666221 + AluSx SINE Alu 6 306 -6 896 270 109 31 chr2 15590719 15591141 -237665442 - MER115 DNA AcHobo -238 455 1 246 217 98 7 chr2 15591338 15591417 -237665166 + MIR SINE MIR 48 130 -78 644 196 0 0 chr2 15592899 15593001 -237663582 + FLAM_A SINE Alu 20 121 -21 353 62 297 0 chr2 15593305 15593414 -237663169 + AluSc SINE Alu 196 323 0 2478 176 20 14 chr2 15593418 15593906 -237662677 + L1MC1 LINE L1 5830 6320 -13 268 338 70 7 chr2 15594471 15594613 -237661970 - L2 LINE L2 -1 3312 3162 196 264 6 154 chr2 15594771 15594953 -237661630 - L2 LINE L2 -424 2890 2736 351 65 0 0 chr2 15595497 15595543 -237661040 + (TG)n Simple_repeat Simple_repeat 2 47 0 1454 104 26 2 chr2 15595717 15595962 -237660621 - pTR5 LTR ERV1 -2046 392 42 270 254 0 0 chr2 15595965 15596036 -237660547 - LTR30 LTR ERV1 -108 614 544 4459 108 26 35 chr2 15596040 15597119 -237659464 - pTR5 LTR ERV1 -417 2021 743 1738 132 8 0 chr2 15597223 15597474 -237659109 - L1PB3 LINE L1 -9 6145 5893 37 0 0 0 chr2 15597480 15597517 -237659066 + AT_rich Low_complexity Low_complexity 1 37 0 2127 70 3 54 chr2 15597717 15598066 -237658517 + AluY SINE Alu 1 334 0 225 298 10 96 chr2 15598956 15599060 -237657523 - MIR SINE MIR -89 119 30 460 276 23 35 chr2 15599072 15599246 -237657337 + MLT1L LTR MaLR 28 199 -416 5468 90 6 1 chr2 15599246 15600023 -237656560 - L1PA8 LINE L1 -14 6158 5378 1073 221 62 96 chr2 15600042 15600459 -237656124 + MLT1L LTR MaLR 196 598 -17 411 254 97 118 chr2 15600499 15600838 -237655745 + L2 LINE L2 2927 3258 -14 295 230 195 0 chr2 15601166 15601253 -237655330 + MIR SINE MIR 42 145 -63 4208 124 45 17 chr2 15601306 15601997 -237654586 - MER50 LTR ERV1 -24 710 1 938 194 6 6 chr2 15602140 15602310 -237654273 - FRAM SINE Alu -11 165 1 2100 201 62 40 chr2 15602364 15602853 -237653730 + MER74A LTR ERVL 16 519 -39 2715 87 3 8 chr2 15602853 15603210 -237653373 - THE1A LTR MaLR 0 355 1 2100 201 62 40 chr2 15603210 15603251 -237653332 + MER74A LTR ERVL 519 558 0 210 374 136 4 chr2 15604833 15605106 -237651477 + L2 LINE L2 2446 2754 -560 2004 212 26 11 chr2 15605268 15605721 -237650862 - MLT1C LTR MaLR -7 460 1 458 297 95 0 chr2 15605847 15605995 -237650588 + L2 LINE L2 3111 3272 0 219 306 108 25 chr2 15606065 15606222 -237650361 + L2 LINE L2 2623 2792 -522 254 265 60 0 chr2 15606233 15606316 -237650267 + L1ME LINE L1 5756 5843 -278 2332 160 29 47 chr2 15606332 15606782 -237649801 - MLT2B2 LTR ERVL -73 442 1 1938 216 58 11 chr2 15607050 15607512 -237649071 + MLT1E2 LTR MaLR 143 626 0 1826 161 48 7 chr2 15607527 15607819 -237648764 - AluJb SINE Alu -8 304 1 258 280 30 113 chr2 15608126 15608294 -237648289 - MIR SINE MIR -74 188 35 182 349 198 0 chr2 15609670 15609776 -237646807 + MIR3 SINE MIR 11 137 -71 245 200 15 15 chr2 15610530 15610595 -237645988 - MLT2B2 LTR ERVL 0 515 451 2937 3 0 0 chr2 15610655 15610964 -237645619 - AluYa5 SINE Alu -2 309 1 216 365 19 9 chr2 15611372 15611479 -237645104 - L2 LINE L2 -286 2986 2879 2538 37 44 0 chr2 15611798 15612093 -237644490 + AluY SINE Alu 1 308 -3 339 287 45 38 chr2 15612128 15612285 -237644298 - L2 LINE L2 -814 2500 2343 408 308 103 27 chr2 15613158 15613546 -237643037 - L1ME3A LINE L1 -304 5866 5445 406 286 40 8 chr2 15613670 15613796 -237642787 - MIR SINE MIR -2 260 131 183 217 87 0 chr2 15613813 15613859 -237642724 - L2 LINE L2 0 3313 3264 309 265 20 10 chr2 15614291 15614389 -237642194 + LTR67 LTR ERVL 459 557 0 1916 142 126 0 chr2 15614617 15614935 -237641648 - THE1B LTR MaLR -2 362 5 1886 175 7 0 chr2 15615052 15615360 -237641223 - AluJo SINE Alu -2 310 1 272 239 60 60 chr2 15615583 15615700 -237640883 + L2 LINE L2 3122 3238 -34 348 331 77 8 chr2 15615844 15615974 -237640609 - L2 LINE L2 -13 3259 3121 203 336 98 25 chr2 15616036 15616158 -237640425 - MIR SINE MIR -122 140 10 308 268 47 47 chr2 15616199 15616326 -237640257 - L2 LINE L2 -14 3258 3132 1887 157 10 0 chr2 15616333 15616633 -237639950 - AluJo SINE Alu -9 303 1 193 185 37 93 chr2 15616730 15616784 -237639799 - L2 LINE L2 0 3313 3263 325 368 125 32 chr2 15617676 15617956 -237638627 - L2 LINE L2 -49 3223 2918 180 286 20 0 chr2 15619169 15619218 -237637365 - L2 LINE L2 -8 3305 3256 * 625 307 226 46 chr2 15619207 15620113 -237636470 - L3 LINE CR1 -16 1561 419 1996 151 0 3 chr2 15620113 15620430 -237636153 - AluSx SINE Alu 0 312 1 625 307 226 46 chr2 15620430 15620627 -237635956 - L3 LINE CR1 -1158 419 259 1807 140 81 31 chr2 15620684 15621041 -237635542 + THE1C LTR MaLR 1 375 0 388 266 37 0 chr2 15621315 15621424 -237635159 + MER94 DNA DNA 1 113 -21 219 232 7 162 chr2 15621872 15622014 -237634569 - MIR3 SINE MIR -3 205 86 231 349 31 14 chr2 15622487 15622656 -237633927 + MIR SINE MIR 88 262 0 748 201 88 34 chr2 15622674 15622878 -237633705 - MER20 DNA MER1_type -3 216 2 334 271 97 52 chr2 15622912 15623067 -237633516 + MIR SINE MIR 6 167 -95 2412 64 0 3 chr2 15623349 15623645 -237632938 - AluY SINE Alu -14 297 3 322 264 131 0 chr2 15623766 15623915 -237632668 - MIR SINE MIR -73 189 23 218 247 9 76 chr2 15623980 15624011 -237632572 + GA-rich Low_complexity Low_complexity 1 33 -434 2127 172 21 3 chr2 15624011 15624394 -237632189 - MLT1B LTR MaLR 0 390 1 218 247 9 76 chr2 15624394 15624481 -237632102 + GA-rich Low_complexity Low_complexity 33 467 0 224 257 29 0 chr2 15625086 15625156 -237631427 - MIR SINE MIR -56 152 81 1211 243 23 32 chr2 15625641 15625987 -237630596 - MLT1C LTR MaLR 0 467 125 488 310 103 59 chr2 15626956 15627057 -237629526 - L2 LINE L2 -2 3311 3216 2351 87 7 0 chr2 15627057 15627346 -237629237 + AluSc SINE Alu 3 293 -16 488 310 103 59 chr2 15627346 15627583 -237629000 - L2 LINE L2 -97 3216 2958 1350 57 119 0 chr2 15627676 15627870 -237628713 + MER30 DNA MER1_type 14 230 0 188 310 152 43 chr2 15628435 15628619 -237627964 - L2 LINE L2 -12 3301 3098 321 261 34 0 chr2 15628897 15628985 -237627598 - MIR SINE MIR -71 137 47 205 294 23 90 chr2 15629297 15629474 -237627109 + L3 LINE CR1 774 938 -639 933 120 8 15 chr2 15629478 15629611 -237626972 - AluSq/x SINE Alu -181 132 1 563 338 71 11 chr2 15629627 15629896 -237626687 + L3 LINE CR1 938 1222 -355 202 356 81 0 chr2 15629995 15630082 -237626501 + L3 LINE CR1 1417 1510 -67 662 215 246 0 chr2 15630097 15630292 -237626291 - MIR SINE MIR 0 262 20 192 311 14 40 chr2 15630288 15630362 -237626221 + L3 LINE CR1 1504 1575 -2 * 268 317 122 19 chr2 15631180 15631385 -237625198 + L2 LINE L2 2946 3171 -101 201 74 0 0 chr2 15632087 15632114 -237624469 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 193 286 0 20 chr2 15632505 15632554 -237624029 - MIR SINE MIR -89 173 126 2152 104 27 7 chr2 15632883 15633180 -237623403 - AluSg SINE Alu -7 303 1 476 246 271 10 chr2 15633725 15633924 -237622659 - MIR SINE MIR -7 255 5 255 298 178 48 chr2 15634659 15634867 -237621716 - MIR SINE MIR -15 247 13 429 328 55 37 chr2 15635262 15635588 -237620995 + L2 LINE L2 2555 2886 -428 303 260 0 13 chr2 15635644 15635721 -237620862 + L2 LINE L2 2894 2969 -303 1872 139 18 4 chr2 15636089 15636392 -237620191 - AluSx SINE Alu 0 307 1 247 319 11 43 chr2 15636406 15636500 -237620083 - MIR SINE MIR -164 98 8 498 244 208 25 chr2 15637065 15637339 -237619244 + MLT1J2 LTR MaLR 1 324 -126 395 253 12 0 chr2 15637357 15637440 -237619143 + L2 LINE L2 3189 3272 0 181 307 188 0 chr2 15637470 15637571 -237619012 - MIR SINE MIR -72 190 71 269 320 34 54 chr2 15637731 15637878 -237618705 + MER5A DNA MER1_type 18 161 -28 * 426 340 27 7 chr2 15637752 15637902 -237618681 - MER5B DNA MER1_type -22 156 4 602 293 44 0 chr2 15637914 15638095 -237618488 + MIR SINE MIR 20 208 -54 981 261 80 3 chr2 15638423 15638737 -237617846 - L1MD2 LINE L1 -205 6154 5817 1038 93 7 0 chr2 15638743 15638883 -237617700 - AluSg/x SINE Alu -2 310 170 1790 218 107 6 chr2 15638885 15639353 -237617230 - L1ME1 LINE L1 -340 5826 5312 2498 241 43 30 chr2 15639374 15640343 -237616240 - L1ME1 LINE L1 -5 6095 5109 1270 233 167 12 chr2 15640347 15640767 -237615816 - L1MD2 LINE L1 -10 6349 5865 562 117 47 39 chr2 15640773 15640901 -237615682 - L1MDa LINE L1 -3922 2618 2490 * 1267 170 26 26 chr2 15640884 15641195 -237615388 - L1MDa LINE L1 -4375 2165 1855 * 2070 237 94 16 chr2 15641194 15641690 -237614893 - L1ME1 LINE L1 -1054 5026 4570 1036 203 85 42 chr2 15641690 15642020 -237614563 + MER2 DNA MER2_type 1 344 0 2070 237 94 16 chr2 15642020 15642355 -237614228 - L1ME1 LINE L1 -1510 4570 3977 895 201 6 0 chr2 15642355 15642519 -237614064 - MLT1E LTR MaLR 0 593 429 255 191 0 0 chr2 15642519 15642561 -237614022 + AluSp SINE Alu 136 177 -126 1731 191 26 0 chr2 15642641 15642945 -237613638 - AluJo SINE Alu 0 312 1 4044 246 20 25 chr2 15642947 15644274 -237612309 - L1ME1 LINE L1 -2299 3781 2462 300 253 42 42 chr2 15644267 15644362 -237612221 - L1ME1 LINE L1 -5970 100 6 * 198 345 95 0 chr2 15644928 15645044 -237611539 - MIR3 SINE MIR -69 139 13 751 295 0 20 chr2 15645453 15645653 -237610930 - MIR SINE MIR 0 262 67 511 308 133 56 chr2 15646300 15646622 -237609961 + L2 LINE L2 2926 3272 0 341 256 53 6 chr2 15646836 15646967 -237609616 - MIR SINE MIR -9 199 58 277 224 0 66 chr2 15648244 15648320 -237608263 - MIR SINE MIR -100 108 38 290 241 36 24 chr2 15648357 15648440 -237608143 + MIR3 SINE MIR 110 193 -15 297 235 139 12 chr2 15648647 15648765 -237607818 + MIR SINE MIR 54 182 -68 411 277 62 15 chr2 15649122 15649252 -237607331 - MIR SINE MIR -70 192 57 194 321 36 0 chr2 15649463 15649519 -237607064 - L2 LINE L2 0 3272 3215 525 270 56 42 chr2 15650181 15650396 -237606187 + MIR SINE MIR 13 230 -32 400 323 214 5 chr2 15650536 15650728 -237605855 - L3 LINE CR1 -8 1569 1338 251 333 82 0 chr2 15651091 15651248 -237605335 + MIR SINE MIR 1 171 -37 285 159 159 0 chr2 15652961 15653024 -237603559 + L1MC1 LINE L1 6259 6331 -2 424 329 7 0 chr2 15653127 15653264 -237603319 + MIR SINE MIR 109 246 -16 185 354 31 31 chr2 15654386 15654516 -237602067 - MIR3 SINE MIR -76 132 3 257 298 85 21 chr2 15655042 15655136 -237601447 + MIR3 SINE MIR 60 159 -49 194 343 125 28 chr2 15655304 15655520 -237601063 - L2 LINE L2 -337 2977 2741 186 189 0 0 chr2 15655544 15655581 -237601002 + (TAA)n Simple_repeat Simple_repeat 2 38 0 1122 198 28 32 chr2 15655613 15655865 -237600718 + MLT1A1 LTR MaLR 115 365 0 237 245 98 98 chr2 15656129 15656333 -237600250 + L2 LINE L2 2507 2710 -604 3687 160 26 75 chr2 15656335 15657208 -237599375 + L1MB5 LINE L1 5344 6174 0 1197 271 89 19 chr2 15657266 15657831 -237598752 + L2 LINE L2 2703 3313 0 226 284 0 15 chr2 15657964 15658031 -237598552 + MIR SINE MIR 173 238 -24 1767 181 10 44 chr2 15658195 15658582 -237598001 + MLT1B LTR MaLR 6 379 -11 266 0 29 0 chr2 15659130 15659164 -237597419 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1493 218 68 2 chr2 15659217 15659612 -237596971 + MER97b DNA MER1_type? 243 663 -390 1635 142 84 18 chr2 15659612 15659887 -237596696 - AluJb SINE Alu -13 299 7 381 226 43 34 chr2 15659893 15659952 -237596631 + MER97b DNA MER1_type? 725 782 -271 627 149 0 26 chr2 15659952 15660066 -237596517 + L1MA3 LINE L1 6195 6305 0 381 226 43 34 chr2 15660066 15660175 -237596408 + MER97b DNA MER1_type? 782 1051 -2 294 357 24 0 chr2 15660391 15660517 -237596066 + MIR3 SINE MIR 52 180 -28 272 294 106 44 chr2 15661653 15661833 -237594750 - MIR SINE MIR -33 229 39 2508 112 3 32 chr2 15661921 15662296 -237594287 + THE1B LTR MaLR 1 364 0 363 283 30 41 chr2 15662949 15663130 -237593453 - MIR SINE MIR -63 145 16 381 272 169 42 chr2 15663763 15663976 -237592607 + MIR SINE MIR 12 251 -11 391 229 77 77 chr2 15664101 15664271 -237592312 - MIR3 SINE MIR -32 176 7 221 245 230 0 chr2 15664359 15664469 -237592114 + MIR SINE MIR 45 190 -56 477 318 35 12 chr2 15664636 15664809 -237591774 + MIR3 SINE MIR 15 191 -17 201 333 28 9 chr2 15666020 15666128 -237590455 + MIR SINE MIR 38 147 -61 187 295 172 0 chr2 15666811 15666933 -237589650 + MIR3 SINE MIR 10 152 -56 259 341 91 0 chr2 15667007 15667139 -237589444 + MIR SINE MIR 48 191 -71 2262 101 0 46 chr2 15667227 15667554 -237589029 + AluSq SINE Alu 1 312 -1 182 254 141 45 chr2 15667610 15667787 -237588796 + L2 LINE L2 2760 2953 -361 304 235 15 0 chr2 15667813 15667881 -237588702 + MER81 DNA DNA 26 94 -20 396 248 31 16 chr2 15667982 15668111 -237588472 + L2 LINE L2 3102 3232 -81 277 306 149 15 chr2 15668133 15668267 -237588316 - MIR SINE MIR -77 185 34 211 315 43 11 chr2 15668295 15668387 -237588196 + L2 LINE L2 3219 3313 0 464 302 23 17 chr2 15669178 15669350 -237587233 - MIR SINE MIR -43 219 47 279 244 61 12 chr2 15669423 15669505 -237587078 - MIR3 SINE MIR -21 187 102 212 317 77 0 chr2 15671917 15672021 -237584562 + MIR3 SINE MIR 82 193 -15 1193 249 12 15 chr2 15672735 15673072 -237583511 + L1ME2 LINE L1 5820 6155 -9 1939 179 97 2 chr2 15673085 15673516 -237583067 + L1MB8 LINE L1 5707 6178 0 225 273 168 28 chr2 15673742 15673885 -237582698 + MIR SINE MIR 97 259 -3 * 229 328 26 35 chr2 15673875 15673991 -237582592 - MIR SINE MIR -102 160 46 7224 41 1 0 chr2 15674298 15675645 -237580938 - L1PA4 LINE L1 0 6155 4808 1817 167 15 6 chr2 15675645 15675974 -237580609 + MLT1A1 LTR MaLR 34 365 0 2030 159 36 0 chr2 15676840 15677231 -237579352 - L1MB4 LINE L1 -8 6172 5768 185 298 35 0 chr2 15677253 15677310 -237579273 - L2 LINE L2 -31 3282 3224 2119 127 0 0 chr2 15677993 15678326 -237578257 - AluSx SINE Alu 0 333 1 1820 176 3 3 chr2 15678683 15678985 -237577598 + AluJo SINE Alu 5 306 -6 1949 154 3 0 chr2 15679040 15679359 -237577224 - AluSx SINE Alu 0 320 1 726 133 4 16 chr2 15680783 15681040 -237575543 + (TG)n Simple_repeat Simple_repeat 1 254 0 244 273 91 30 chr2 15681380 15681479 -237575104 - L2 LINE L2 0 3313 3209 324 292 39 23 chr2 15682561 15682691 -237573892 - L3 LINE CR1 -47 1530 1399 459 231 97 31 chr2 15682914 15683099 -237573484 - MIR3 SINE MIR -40 168 7 478 258 137 11 chr2 15685853 15686035 -237570548 - MIR SINE MIR -20 242 38 463 322 65 15 chr2 15686027 15686226 -237570357 + MIR SINE MIR 37 245 -17 * 761 262 93 4 chr2 15686376 15686443 -237570140 - MIR SINE MIR -5 257 197 2175 124 0 0 chr2 15686443 15686741 -237569842 - AluSx SINE Alu -14 298 1 761 262 93 4 chr2 15686741 15686898 -237569685 - MIR SINE MIR -65 197 13 445 248 28 28 chr2 15686929 15687074 -237569509 + L2 LINE L2 3169 3313 0 673 117 36 0 chr2 15687465 15687602 -237568981 + (TCCA)n Simple_repeat Simple_repeat 3 144 0 633 149 37 0 chr2 15687630 15687791 -237568792 + (TCCA)n Simple_repeat Simple_repeat 4 170 0 338 317 28 35 chr2 15688775 15688917 -237567666 - MIR SINE MIR -19 243 103 396 207 21 79 chr2 15689082 15689222 -237567361 + MIR SINE MIR 119 250 -12 991 228 5 5 chr2 15689494 15689700 -237566883 + MER58A DNA MER1_type 18 223 -1 194 314 74 58 chr2 15689720 15689841 -237566742 + L2 LINE L2 3137 3259 -13 904 90 60 0 chr2 15691100 15691233 -237565350 + LTR24 LTR ERV1 11 151 -316 5158 107 34 5 chr2 15691245 15692059 -237564524 + L1PB3 LINE L1 5317 6154 0 1623 160 98 3 chr2 15692070 15692377 -237564206 + LTR24 LTR ERV1 132 467 0 263 289 16 58 chr2 15692379 15692500 -237564083 + MIR SINE MIR 27 142 -120 2144 115 0 4 chr2 15692504 15692782 -237563801 + AluSc SINE Alu 1 277 -32 411 21 0 0 chr2 15692783 15692831 -237563752 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 2851 248 27 2 chr2 15693442 15694079 -237562504 - MER82 DNA MER2_type 0 653 1 268 347 61 0 chr2 15694325 15694423 -237562160 + MIR3 SINE MIR 85 188 -20 912 253 13 9 chr2 15694643 15694868 -237561715 - MIR SINE MIR -29 233 8 329 130 191 2 chr2 15694912 15694983 -237561600 + MER5A DNA MER1_type 27 98 -80 238 289 78 31 chr2 15695042 15695170 -237561413 - MIR SINE MIR -86 176 43 388 351 118 11 chr2 15695605 15695876 -237560707 - L3 LINE CR1 -33 1544 1245 308 312 58 14 chr2 15696384 15696522 -237560061 + MIR SINE MIR 93 236 -26 264 276 49 81 chr2 15696818 15696941 -237559642 - MIR SINE MIR -73 189 71 272 217 0 17 chr2 15697845 15697905 -237558678 + L2 LINE L2 3009 3067 -205 183 276 219 8 chr2 15698279 15698402 -237558181 + L2 LINE L2 3160 3308 -5 228 246 0 0 chr2 15698413 15698482 -237558101 + GA-rich Low_complexity Low_complexity 4 72 0 192 302 0 32 chr2 15699580 15699643 -237556940 - MIR SINE MIR -168 94 34 475 279 75 30 chr2 15700468 15700669 -237555914 - MIR SINE MIR -3 259 50 338 344 8 0 chr2 15701563 15701685 -237554898 - MIR SINE MIR -67 141 19 1272 194 78 34 chr2 15702194 15702488 -237554095 + AluJb SINE Alu 3 309 -3 314 275 179 23 chr2 15703190 15703376 -237553207 + MIR SINE MIR 2 206 -56 381 273 0 27 chr2 15703529 15703639 -237552944 - MER94 DNA DNA -27 107 1 345 288 91 26 chr2 15704036 15704236 -237552347 - MIR SINE MIR -42 220 17 375 289 127 17 chr2 15704363 15704536 -237552047 - MIR3 SINE MIR -1 207 16 366 258 232 56 chr2 15704888 15705121 -237551462 - L2 LINE L2 -2 3270 2997 268 365 54 24 chr2 15705156 15705323 -237551260 - L2 LINE L2 -463 2851 2680 408 287 127 11 chr2 15705378 15705559 -237551024 + L2 LINE L2 2567 2768 -546 461 331 78 59 chr2 15705642 15706013 -237550570 + L2 LINE L2 2895 3272 0 215 351 54 0 chr2 15706297 15706371 -237550212 + L2 LINE L2 3104 3181 -91 198 286 32 0 chr2 15706440 15706503 -237550080 - L2 LINE L2 -86 3186 3122 334 287 139 0 chr2 15706718 15706847 -237549736 - MLT1J2 LTR MaLR -23 427 281 922 186 27 41 chr2 15706852 15706939 -237549644 - MER20 DNA MER1_type -1 218 131 1858 137 14 75 chr2 15706939 15707298 -237549285 + MER1B DNA MER1_type 1 337 0 922 186 27 41 chr2 15707298 15707431 -237549152 - MER20 DNA MER1_type -88 131 1 717 250 27 87 chr2 15707432 15707732 -237548851 - MLT1J2 LTR MaLR -167 283 2 309 280 19 38 chr2 15709723 15709880 -237546703 + CT-rich Low_complexity Low_complexity 2 155 0 1015 169 12 0 chr2 15711400 15711566 -237545017 - AluJb SINE Alu -8 304 137 181 240 53 13 chr2 15711827 15711902 -237544681 - MIR3 SINE MIR -20 188 111 333 240 29 10 chr2 15712227 15712331 -237544252 + MIR3 SINE MIR 10 115 -93 315 290 183 0 chr2 15712646 15712777 -237543806 - MIR3 SINE MIR -22 186 32 203 232 36 0 chr2 15712797 15712853 -237543730 - MIR SINE MIR -63 145 88 582 110 11 0 chr2 15713684 15713775 -237542808 - AluSg SINE Alu -218 92 1 253 208 42 28 chr2 15715256 15715328 -237541255 - LTR16A LTR ERVL -97 353 281 475 308 39 0 chr2 15716186 15716342 -237540241 - MIR SINE MIR -44 218 57 246 147 51 46 chr2 15716390 15716455 -237540128 - MIR SINE MIR -63 145 97 1932 83 0 0 chr2 15716925 15717154 -237539429 - AluSx SINE Alu -83 229 1 2408 98 0 0 chr2 15717354 15717650 -237538933 - AluSg SINE Alu -14 296 1 247 280 10 31 chr2 15717692 15717805 -237538778 + GA-rich Low_complexity Low_complexity 3 189 0 800 193 118 112 chr2 15717958 15718563 -237538020 - LTR50 LTR ERVL -4 791 18 276 222 28 0 chr2 15718714 15718786 -237537797 - L1ME4a LINE L1 -81 6040 5967 2076 98 8 0 chr2 15718801 15719067 -237537516 - AluSx SINE Alu -32 280 13 1890 203 64 2 chr2 15719163 15719601 -237536982 + MLT1C LTR MaLR 1 465 -2 1404 176 203 8 chr2 15719858 15720228 -237536355 - L1MA4A LINE L1 -29 6274 5833 37 0 0 0 chr2 15720233 15720270 -237536313 + AT_rich Low_complexity Low_complexity 1 37 0 602 216 8 13 chr2 15720283 15720477 -237536106 + L1MA4A LINE L1 5774 5969 -162 34 24 0 0 chr2 15720478 15720519 -237536064 + AT_rich Low_complexity Low_complexity 1 41 0 9093 154 41 24 chr2 15720519 15721695 -237534888 - L1M1 LINE L1 -512 5791 4636 2299 125 0 0 chr2 15721695 15722007 -237534576 - AluSx SINE Alu 0 312 1 9093 154 41 24 chr2 15722007 15722716 -237533867 - L1M1 LINE L1 -1667 4636 3856 2135 132 3 3 chr2 15722716 15723019 -237533564 - AluSx SINE Alu -8 304 2 9093 154 41 24 chr2 15723019 15723442 -237533141 - L1M1 LINE L1 -2447 3856 3442 437 307 87 64 chr2 15723714 15723832 -237532751 - L1ME LINE L1 -589 5532 5418 2149 149 3 0 chr2 15723832 15724140 -237532443 + AluSx SINE Alu 1 309 -3 437 307 87 64 chr2 15724140 15724584 -237531999 - L1ME LINE L1 -703 5418 4991 2611 34 3 0 chr2 15725203 15725500 -237531083 + AluY SINE Alu 1 298 -13 445 311 48 82 chr2 15725679 15726033 -237530550 - L2 LINE L2 -435 2879 2538 1507 224 18 23 chr2 15726398 15726786 -237529797 - L1ME LINE L1 -1805 4341 3956 195 323 162 20 chr2 15727596 15727695 -237528888 - L2 LINE L2 -5 3267 3155 226 294 20 98 chr2 15727964 15728168 -237528415 + MIR SINE MIR 73 260 -2 2149 128 0 0 chr2 15728209 15728513 -237528070 + AluSx SINE Alu 1 304 -8 260 238 138 25 chr2 15728842 15728922 -237527661 - L2 LINE L2 -5 3267 3179 210 114 71 171 chr2 15729356 15729426 -237527157 - MER91B DNA MER1_type 0 140 78 620 323 36 0 chr2 15730498 15730690 -237525893 - L2 LINE L2 -12 3301 3103 2097 109 7 0 chr2 15730704 15731006 -237525577 - AluSq SINE Alu -9 304 1 239 297 11 22 chr2 15731071 15731162 -237525421 - L2 LINE L2 -611 2703 2614 1314 234 246 30 chr2 15731175 15731846 -237524737 + HAL1 LINE L1 1692 2507 0 2949 200 55 29 chr2 15731873 15732661 -237523922 + L1ME2 LINE L1 5192 6006 -158 2423 146 25 15 chr2 15732841 15733246 -237523337 + Tigger2a DNA MER2_type 26 434 0 489 236 0 0 chr2 15733249 15733359 -237523224 + L1ME2 LINE L1 6046 6155 -9 667 161 0 17 chr2 15733371 15733489 -237523094 + U5 snRNA snRNA 1 116 0 2067 119 7 0 chr2 15733562 15733865 -237522718 + AluSx SINE Alu 1 305 -7 543 107 0 0 chr2 15733876 15733951 -237522632 + AluSc SINE Alu 159 233 -76 546 57 0 0 chr2 15733963 15734033 -237522550 + (CA)n Simple_repeat Simple_repeat 2 71 0 719 190 56 14 chr2 15734220 15734362 -237522221 + MLT1G1 LTR MaLR 448 595 0 298 330 12 0 chr2 15734364 15734399 -237522184 + MLT1G1-int LTR MaLR 3 36 -1350 225 65 0 0 chr2 15734399 15734430 -237522153 + (CA)n Simple_repeat Simple_repeat 2 32 0 298 330 12 0 chr2 15734430 15734502 -237522081 + MLT1G1-int LTR MaLR 36 112 -1274 326 232 10 0 chr2 15734623 15734722 -237521861 + L1MA7 LINE L1 6192 6291 0 21 0 0 0 chr2 15734751 15734772 -237521811 + AT_rich Low_complexity Low_complexity 1 21 0 352 234 70 23 chr2 15734785 15734913 -237521670 + MLT1G1-int LTR MaLR 419 552 -819 3741 150 30 7 chr2 15734914 15735586 -237520997 + L1MC1 LINE L1 5647 6333 0 547 210 8 40 chr2 15736181 15736305 -237520278 + MLT1G1 LTR MaLR 471 590 -5 1972 137 0 13 chr2 15736312 15736626 -237519957 + AluSx SINE Alu 1 310 -2 427 201 58 26 chr2 15736647 15736801 -237519782 + L1MEc LINE L1 1315 1473 -4923 329 255 88 0 chr2 15737459 15737561 -237519022 - MER91C DNA MER1_type -2 138 28 186 43 0 0 chr2 15737895 15737918 -237518665 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 310 301 14 14 chr2 15738095 15738238 -237518345 + L2 LINE L2 2849 2991 -281 262 181 345 26 chr2 15738416 15738532 -237518051 - MIR SINE MIR 0 262 110 27 0 0 0 chr2 15738897 15738924 -237517659 + AT_rich Low_complexity Low_complexity 1 27 0 312 275 83 8 chr2 15739385 15739505 -237517078 + MIR3 SINE MIR 42 170 -38 241 308 184 17 chr2 15739490 15739724 -237516859 + L3 LINE CR1 1301 1573 -4 * 496 210 0 10 chr2 15740301 15740401 -237516182 + MLT1J2 LTR MaLR 349 447 -3 322 320 140 0 chr2 15740416 15740566 -237516017 + L2 LINE L2 3102 3272 0 204 182 45 0 chr2 15741002 15741046 -237515537 - MIR SINE MIR -82 126 81 327 382 20 7 chr2 15741213 15741365 -237515218 + MIR3 SINE MIR 36 189 -19 674 291 105 49 chr2 15741898 15742242 -237514341 - L2 LINE L2 0 3313 2951 388 316 45 8 chr2 15743032 15743165 -237513418 + L2 LINE L2 3134 3271 -1 316 205 193 0 chr2 15743178 15743261 -237513322 + MIR SINE MIR 58 156 -106 251 282 24 35 chr2 15744624 15744709 -237511874 - MIR3 SINE MIR -31 177 94 251 240 221 10 chr2 15744746 15744811 -237511772 - L2 LINE L2 0 3313 3263 2116 125 3 0 chr2 15744811 15745114 -237511469 + AluSx SINE Alu 1 304 -8 251 240 221 10 chr2 15745114 15745152 -237511431 - L2 LINE L2 -50 3263 3188 262 192 141 40 chr2 15745616 15745715 -237510868 - MIR3 SINE MIR -14 194 86 315 240 103 75 chr2 15745786 15745854 -237510729 + MIR3 SINE MIR 58 123 -85 2047 136 10 0 chr2 15745854 15746162 -237510421 - AluSx SINE Alu -1 311 1 315 240 103 75 chr2 15746162 15746239 -237510344 + MIR3 SINE MIR 123 207 -1 1513 197 13 13 chr2 15746393 15746698 -237509885 - AluJo SINE Alu -7 305 1 307 128 0 0 chr2 15746735 15746782 -237509801 + L2 LINE L2 3225 3271 -1 197 250 244 31 chr2 15747288 15747448 -237509135 + L2 LINE L2 3076 3269 -3 395 286 127 10 chr2 15747664 15747861 -237508722 - MIR3 SINE MIR -3 205 20 279 0 0 0 chr2 15747908 15747939 -237508644 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 235 200 0 122 chr2 15748268 15748358 -237508225 + MIR SINE MIR 66 144 -118 254 156 0 87 chr2 15748382 15748428 -237508155 + L2 LINE L2 3219 3301 -12 2020 125 3 6 chr2 15748524 15748837 -237507746 - AluSx SINE Alu 0 312 1 389 256 83 16 chr2 15748911 15749032 -237507551 + MIR SINE MIR 83 211 -51 201 290 0 29 chr2 15749071 15749140 -237507443 + MIR3 SINE MIR 12 78 -130 373 279 58 41 chr2 15749248 15749420 -237507163 - MER5B DNA MER1_type -3 175 1 333 292 80 26 chr2 15750177 15750290 -237506293 + MIR SINE MIR 30 148 -60 464 287 36 30 chr2 15750941 15751108 -237505475 + MIR SINE MIR 80 247 -15 344 214 137 43 chr2 15751207 15751324 -237505259 + MIR3 SINE MIR 70 197 -11 1763 146 14 0 chr2 15751804 15752091 -237504492 - AluJb SINE Alu -21 291 1 990 139 0 0 chr2 15752193 15752368 -237504215 + AluSg/x SINE Alu 138 312 0 255 254 71 71 chr2 15752715 15752841 -237503742 - MIR SINE MIR -49 213 88 2643 148 14 99 chr2 15753029 15753478 -237503105 - MLT2B2 LTR ERVL -2 513 118 1837 140 7 23 chr2 15753478 15753786 -237502797 + AluSx SINE Alu 9 311 -1 2643 148 14 99 chr2 15753786 15753892 -237502691 - MLT2B2 LTR ERVL -397 118 5 275 115 0 96 chr2 15753948 15754000 -237502583 + MLT1B LTR MaLR 1 47 -343 2172 176 36 5 chr2 15754001 15754393 -237502190 + MLT2B3 LTR ERVL 2 405 -149 2846 222 45 25 chr2 15754649 15754763 -237501820 + MER82 DNA MER2_type 1 111 -542 2176 95 3 13 chr2 15754763 15755067 -237501516 - AluSx SINE Alu -11 301 1 2846 222 45 25 chr2 15755067 15755592 -237500991 + MER82 DNA MER2_type 111 653 0 2191 252 43 10 chr2 15755683 15756287 -237500296 + L1ME3 LINE L1 5539 6162 0 245 217 15 14 chr2 15756439 15756509 -237500074 - MIR3 SINE MIR -53 155 110 382 297 62 33 chr2 15756583 15756972 -237499611 + MLT1L LTR MaLR 89 567 0 225 359 39 8 chr2 15757049 15757177 -237499406 + LTR16C LTR ERVL 292 423 -68 2231 128 22 33 chr2 15757641 15758009 -237498574 - THE1B LTR MaLR 0 364 1 379 182 0 0 chr2 15758245 15758311 -237498272 + LTR16C LTR ERVL 426 491 0 1388 250 76 16 chr2 15758441 15758877 -237497706 - MLT1C LTR MaLR 0 467 6 266 235 109 42 chr2 15758961 15759080 -237497503 + MIR3 SINE MIR 30 156 -52 327 282 282 6 chr2 15759591 15759765 -237496818 - MIR SINE MIR -13 249 28 2556 175 60 20 chr2 15759863 15760400 -237496183 + L1MB3 LINE L1 5586 6143 -40 825 111 0 8 chr2 15760404 15760530 -237496053 + FLAM_C SINE Alu 7 131 -12 286 47 0 23 chr2 15760541 15760584 -237495999 + L1MB3 LINE L1 6134 6175 -8 * 536 150 19 33 chr2 15760576 15760694 -237495889 + L1ME LINE L1 5491 5604 -560 1955 121 0 10 chr2 15761344 15761659 -237494924 + AluSx SINE Alu 1 312 0 246 321 46 9 chr2 15761869 15761978 -237494605 - MIR SINE MIR -29 233 121 190 364 39 23 chr2 15762355 15762484 -237494099 + MIR SINE MIR 20 150 -112 1346 243 2 57 chr2 15762506 15762910 -237493673 + L1ME1 LINE L1 5423 5804 -362 975 202 50 0 chr2 15762911 15763129 -237493454 + L1ME1 LINE L1 5930 6158 -8 234 291 63 0 chr2 15763704 15763783 -237492800 + MIR3 SINE MIR 91 174 -34 767 281 104 18 chr2 15765407 15765734 -237490849 - L1ME3A LINE L1 -5 6165 5811 290 238 238 9 chr2 15766369 15766583 -237490000 + L1ME1 LINE L1 2896 3158 -2988 621 122 8 15 chr2 15766583 15766821 -237489762 + AluSx SINE Alu 19 303 -6 6864 215 43 83 chr2 15766827 15766919 -237489664 + L1ME1 LINE L1 3170 3264 -2902 2423 180 13 15 chr2 15766919 15767381 -237489202 + MER65C LTR ERV1 1 461 0 6864 215 43 83 chr2 15767381 15768822 -237487761 + L1ME1 LINE L1 3264 4761 -1405 1921 120 9 46 chr2 15768822 15769146 -237487437 + AluSx SINE Alu 1 312 0 6864 215 43 83 chr2 15769146 15769688 -237486895 + L1ME1 LINE L1 4761 5323 -843 1441 181 62 20 chr2 15769688 15769980 -237486603 + AluJo SINE Alu 1 304 -8 6864 215 43 83 chr2 15769980 15770372 -237486211 + L1ME1 LINE L1 5323 5729 -437 2379 113 25 22 chr2 15770372 15770735 -237485848 + THE1B LTR MaLR 1 364 0 6864 215 43 83 chr2 15770735 15770772 -237485811 + L1ME1 LINE L1 5729 5766 -400 2233 111 0 0 chr2 15770772 15771079 -237485504 + AluSx SINE Alu 1 307 -5 6864 215 43 83 chr2 15771079 15771323 -237485260 + L1ME1 LINE L1 5766 6018 -148 2373 82 3 0 chr2 15771323 15771629 -237484954 + AluSp SINE Alu 5 311 -2 6864 215 43 83 chr2 15771629 15771690 -237484893 + L1ME1 LINE L1 6018 6080 -86 602 217 9 0 chr2 15771690 15771805 -237484778 + FLAM_A SINE Alu 1 116 -17 6864 215 43 83 chr2 15771805 15771818 -237484765 + L1ME1 LINE L1 6080 6092 -74 266 85 0 21 chr2 15771818 15771865 -237484718 + (TA)n Simple_repeat Simple_repeat 1 46 0 6864 215 43 83 chr2 15771865 15771928 -237484655 + L1ME1 LINE L1 6092 5929 -237 2076 115 26 0 chr2 15771928 15772233 -237484350 + AluSq SINE Alu 1 313 0 6864 215 43 83 chr2 15772233 15772326 -237484257 + L1ME1 LINE L1 5928 6023 -143 2073 114 0 0 chr2 15772326 15772624 -237483959 + AluSx SINE Alu 1 298 -14 703 195 19 19 chr2 15772632 15772791 -237483792 + L1MA10 LINE L1 6176 6334 0 1099 255 64 75 chr2 15772841 15773000 -237483583 + HAL1 LINE L1 1810 1969 -538 1965 112 22 0 chr2 15773000 15773324 -237483259 + AluSx SINE Alu 1 330 0 1099 255 64 75 chr2 15773324 15773868 -237482715 + HAL1 LINE L1 1969 2506 -1 918 151 7 0 chr2 15774682 15774828 -237481755 - AluSg/x SINE Alu -26 284 138 217 200 44 0 chr2 15774858 15774903 -237481680 + CT-rich Low_complexity Low_complexity 3 49 0 24 0 0 0 chr2 15774903 15774927 -237481656 + AT_rich Low_complexity Low_complexity 1 24 0 524 294 80 33 chr2 15774982 15775257 -237481326 - L2 LINE L2 -101 3212 2925 301 263 128 38 chr2 15775348 15775481 -237481102 - LTR16A LTR ERVL -10 440 296 770 267 68 28 chr2 15775495 15775821 -237480762 - HERV16 LTR ERVL -4468 528 190 521 319 72 50 chr2 15775997 15776084 -237480499 - LTR16A LTR ERVL -30 420 336 2272 119 0 0 chr2 15776084 15776394 -237480189 + AluSx SINE Alu 2 311 -1 521 319 72 50 chr2 15776394 15776626 -237479957 - LTR16A LTR ERVL -114 336 94 2319 116 3 0 chr2 15777159 15777470 -237479113 + AluSx SINE Alu 1 312 0 624 163 15 2 chr2 15777496 15777759 -237478824 + AluSx SINE Alu 1 309 0 538 229 80 23 chr2 15778783 15778958 -237477625 + MIR SINE MIR 27 211 -51 2050 133 0 3 chr2 15779368 15779691 -237476892 - AluSx SINE Alu 0 322 1 197 365 177 0 chr2 15779698 15779890 -237476693 + L2 LINE L2 2532 2757 -557 181 329 12 37 chr2 15780090 15780172 -237476411 - L2 LINE L2 0 3313 3234 1178 143 46 19 chr2 15780476 15780692 -237475891 + AluJb SINE Alu 85 306 -6 698 248 103 52 chr2 15780742 15780799 -237475784 + L1ME3A LINE L1 5254 5307 -863 2218 126 32 24 chr2 15780799 15781171 -237475412 - THE1C LTR MaLR 0 375 1 698 248 103 52 chr2 15781171 15781500 -237475083 + L1ME3A LINE L1 5307 5660 -510 25 0 0 0 chr2 15781974 15781999 -237474584 + AT_rich Low_complexity Low_complexity 1 25 0 690 263 39 109 chr2 15781999 15782298 -237474285 + L1ME3A LINE L1 5653 5899 -271 261 0 0 0 chr2 15782298 15782327 -237474256 + (CA)n Simple_repeat Simple_repeat 2 30 0 690 263 39 109 chr2 15782327 15782568 -237474015 + L1ME3A LINE L1 5899 6155 -15 2507 135 3 0 chr2 15783358 15783721 -237472862 + THE1B LTR MaLR 1 364 0 246 313 84 0 chr2 15783837 15783920 -237472663 - L2 LINE L2 -4 3268 3179 1426 266 184 8 chr2 15784111 15784644 -237471939 + MER69 DNA AcHobo 27 653 -1873 1039 157 18 0 chr2 15784646 15784812 -237471771 + AluSg/x SINE Alu 133 301 -9 685 250 13 0 chr2 15784832 15784984 -237471599 + MER69 DNA AcHobo 648 801 -425 1656 183 92 36 chr2 15784995 15785086 -237471497 + MER69 DNA AcHobo 2031 2116 -410 2344 86 3 3 chr2 15785086 15785388 -237471195 + AluSq SINE Alu 1 302 -11 1656 183 92 36 chr2 15785388 15785453 -237471130 + MER69 DNA AcHobo 2116 2176 -350 2088 138 24 3 chr2 15785453 15785751 -237470832 + AluSx SINE Alu 1 304 -8 1656 183 92 36 chr2 15785751 15786062 -237470521 + MER69 DNA AcHobo 2176 2525 -1 214 322 54 13 chr2 15787041 15787190 -237469393 - MIR3 SINE MIR -43 165 11 1611 149 58 0 chr2 15787554 15787795 -237468788 + AluSq SINE Alu 1 255 -58 1793 171 7 3 chr2 15787837 15788130 -237468453 - AluJo SINE Alu -18 294 1 1000 259 36 68 chr2 15788555 15789131 -237467452 + L1MC4a LINE L1 4637 5194 -952 7249 56 2 1 chr2 15789189 15790187 -237466396 + L1PA6 LINE L1 5158 6154 0 296 257 0 0 chr2 15790212 15790286 -237466297 + L1MC4a LINE L1 5368 5441 -733 26 0 0 0 chr2 15790297 15790323 -237466260 + AT_rich Low_complexity Low_complexity 1 26 0 911 283 100 29 chr2 15790323 15790748 -237465835 + L1ME3 LINE L1 5358 5834 -328 2084 93 62 0 chr2 15790748 15791039 -237465544 + AluSx SINE Alu 1 309 -3 911 283 100 29 chr2 15791039 15791149 -237465434 + L1ME3 LINE L1 5834 5935 -227 765 272 22 18 chr2 15791333 15791665 -237464918 + L1MC4a LINE L1 5683 6017 -104 2202 119 10 0 chr2 15791758 15792060 -237464523 + AluSp SINE Alu 1 305 -8 633 251 115 36 chr2 15792656 15792940 -237463643 + L1MC4a LINE L1 5706 6021 -1787 1235 133 23 144 chr2 15792940 15793287 -237463296 + AluSc SINE Alu 1 305 -4 633 251 115 36 chr2 15793287 15793332 -237463251 + L1MC4a LINE L1 6021 6061 -1747 359 300 120 71 chr2 15793349 15793825 -237462758 + L1MC4a LINE L1 6098 6596 -1212 279 191 0 0 chr2 15793825 15793888 -237462695 + GA-rich Low_complexity Low_complexity 1 63 0 245 182 45 0 chr2 15793891 15793935 -237462648 + L1MC4 LINE L1 6697 6742 -1300 1773 42 9 0 chr2 15793935 15794149 -237462434 + L1PA3 LINE L1 5937 6152 -3 1923 220 32 131 chr2 15794207 15794932 -237461651 + L1MC5 LINE L1 6669 7230 -731 453 81 0 0 chr2 15794932 15794994 -237461589 + (TGGA)n Simple_repeat Simple_repeat 3 64 0 1923 220 32 131 chr2 15794994 15795466 -237461117 + L1MC5 LINE L1 7230 7747 -214 423 197 28 0 chr2 15795597 15795668 -237460915 + MER81 DNA DNA 5 77 -37 1612 181 54 0 chr2 15795671 15795947 -237460636 + AluJb SINE Alu 1 291 -21 521 292 143 34 chr2 15795951 15796365 -237460218 + L1MC/D LINE L1 5320 5778 -2030 1857 145 0 53 chr2 15796366 15796669 -237459914 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr2 15796674 15796696 -237459887 + AT_rich Low_complexity Low_complexity 1 22 0 321 236 97 0 chr2 15796833 15796905 -237459678 - MER58 DNA MER1_type 0 2420 2342 275 323 96 25 chr2 15796896 15797094 -237459489 + MLT1J2 LTR MaLR 116 327 -123 * 1468 164 141 0 chr2 15797173 15797429 -237459154 + AluJo SINE Alu 2 293 -9 199 279 33 0 chr2 15797708 15797769 -237458814 - MIR SINE MIR -107 155 93 206 303 49 25 chr2 15798217 15798339 -237458244 + MIR SINE MIR 64 188 -74 1139 231 108 91 chr2 15798585 15798682 -237457901 + MLT1G1 LTR MaLR 1 95 -500 2183 123 0 0 chr2 15798682 15798982 -237457601 + AluSq SINE Alu 1 300 -13 1139 231 108 91 chr2 15798982 15799469 -237457114 + MLT1G1 LTR MaLR 95 595 0 299 298 63 27 chr2 15799847 15800030 -237456553 - L2 LINE L2 -245 3068 2865 2211 116 0 10 chr2 15800030 15800341 -237456242 + AluSx SINE Alu 1 308 -4 299 298 63 27 chr2 15800341 15800482 -237456101 - L2 LINE L2 -448 2865 2731 432 0 0 0 chr2 15800776 15800824 -237455759 + (CA)n Simple_repeat Simple_repeat 1 48 0 243 88 0 0 chr2 15801316 15801350 -237455233 + (CA)n Simple_repeat Simple_repeat 1 34 0 259 100 125 75 chr2 15802143 15802223 -237454360 + MER5A DNA MER1_type 9 92 -97 180 186 68 34 chr2 15802753 15802812 -237453771 - MIR SINE MIR -70 192 132 384 309 67 6 chr2 15803990 15804155 -237452428 - MIR SINE MIR -80 182 8 1958 157 0 10 chr2 15804610 15804923 -237451660 + AluSx SINE Alu 2 311 -1 3066 150 2 43 chr2 15805077 15805658 -237450925 + L1MB3 LINE L1 5613 6169 -14 386 226 104 0 chr2 15805708 15805823 -237450760 - MIR SINE MIR -66 142 16 184 311 37 30 chr2 15805951 15806086 -237450497 + MIR3 SINE MIR 66 201 -7 198 0 0 0 chr2 15806555 15806577 -237450006 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 856 249 117 36 chr2 15806786 15807289 -237449294 - L1ME4a LINE L1 0 6121 5578 584 222 54 76 chr2 15808597 15808782 -237447801 + HAL1 LINE L1 25 205 -2302 244 252 119 84 chr2 15808972 15808991 -237447592 + HAL1 LINE L1 1301 1318 -1189 486 0 0 0 chr2 15808991 15809045 -237447538 + (TA)n Simple_repeat Simple_repeat 2 55 0 1560 171 0 8 chr2 15809045 15809297 -237447286 - AluJb SINE Alu -26 286 37 244 252 119 84 chr2 15809297 15809419 -237447164 + HAL1 LINE L1 1317 1448 -1059 203 54 81 0 chr2 15809431 15809468 -237447115 + T-rich Low_complexity Low_complexity 3 42 0 810 207 59 17 chr2 15809483 15809720 -237446863 + HAL1 LINE L1 1508 1754 -753 4767 231 67 109 chr2 15809739 15810347 -237446236 + L1MEc LINE L1 66 698 -5698 947 129 8 0 chr2 15810347 15810479 -237446104 + FLAM_C SINE Alu 1 133 0 4767 231 67 109 chr2 15810479 15810669 -237445914 + L1MEc LINE L1 698 895 -5501 1839 157 3 23 chr2 15810669 15810975 -237445608 + AluSx SINE Alu 1 300 -12 4767 231 67 109 chr2 15810975 15811315 -237445268 + L1MEc LINE L1 895 1248 -5148 293 274 23 3 chr2 15811315 15811431 -237445152 + MLT1F1 LTR MaLR 30 147 -420 4767 231 67 109 chr2 15811431 15811483 -237445100 + L1MEc LINE L1 1248 1301 -5095 2022 140 3 0 chr2 15811483 15811775 -237444808 + AluSx SINE Alu 1 293 -19 4767 231 67 109 chr2 15811775 15812773 -237443810 + L1MEc LINE L1 1301 2274 -4122 421 287 32 43 chr2 15812778 15812966 -237443617 + MLT1F1 LTR MaLR 1 186 -356 225 132 0 0 chr2 15812966 15813004 -237443579 + (TC)n Simple_repeat Simple_repeat 2 39 0 212 119 0 24 chr2 15813025 15813067 -237443516 + (TC)n Simple_repeat Simple_repeat 2 42 0 962 216 118 15 chr2 15813067 15813384 -237443199 + MLT1F1 LTR MaLR 184 567 0 3701 146 41 65 chr2 15813435 15813743 -237442840 + L1MB4 LINE L1 5444 5758 -422 2019 117 0 4 chr2 15813743 15814016 -237442567 + AluSx SINE Alu 21 292 -20 3701 146 41 65 chr2 15814016 15814174 -237442409 + L1MB4 LINE L1 5758 5918 -262 2272 113 3 3 chr2 15814174 15814483 -237442100 + AluSg1 SINE Alu 1 309 0 3701 146 41 65 chr2 15814483 15814770 -237441813 + L1MB4 LINE L1 5918 6180 0 555 259 102 25 chr2 15814768 15815042 -237441541 + L1MEc LINE L1 2262 2556 -3659 * 2044 127 0 10 chr2 15815043 15815334 -237441249 + AluSx SINE Alu 1 288 -24 534 196 0 0 chr2 15815363 15815465 -237441118 + U13 snRNA snRNA 1 102 -2 22 0 0 0 chr2 15815474 15815496 -237441087 + AT_rich Low_complexity Low_complexity 1 22 0 1724 212 20 36 chr2 15815496 15815779 -237440804 + L1MEc LINE L1 2546 2821 -3394 2180 128 0 0 chr2 15815779 15816077 -237440506 - AluSx SINE Alu -14 298 1 1724 212 20 36 chr2 15816077 15816237 -237440346 + L1MEc LINE L1 2821 2982 -3233 29 0 0 0 chr2 15816337 15816366 -237440217 + AT_rich Low_complexity Low_complexity 1 29 0 201 227 0 0 chr2 15816650 15816694 -237439889 - MIR SINE MIR -115 147 104 2307 106 7 0 chr2 15817263 15817564 -237439019 - AluSp SINE Alu -10 303 1 2300 98 3 16 chr2 15818383 15818690 -237437893 + AluSx SINE Alu 1 303 -9 306 0 0 0 chr2 15818818 15818852 -237437731 + (TA)n Simple_repeat Simple_repeat 1 34 0 205 237 0 144 chr2 15820082 15820157 -237436426 - L3 LINE CR1 -16 1561 1507 2020 189 45 13 chr2 15820157 15820606 -237435977 - MLT1C LTR MaLR -1 466 4 205 237 0 144 chr2 15820606 15820648 -237435935 - L3 LINE CR1 -70 1507 1461 209 200 25 0 chr2 15820707 15820747 -237435836 + CT-rich Low_complexity Low_complexity 1 41 0 274 289 0 0 chr2 15820747 15820823 -237435760 - L2 LINE L2 -13 3300 3225 374 247 0 0 chr2 15820982 15821063 -237435520 + MER94 DNA DNA 2 82 -52 195 265 137 51 chr2 15823003 15823120 -237433463 + L2 LINE L2 3129 3255 -17 266 279 38 0 chr2 15823208 15823287 -237433296 + ORSL DNA AcHobo 1 82 -193 2147 113 24 3 chr2 15823287 15823580 -237433003 + AluSx SINE Alu 1 299 -13 229 216 39 0 chr2 15823580 15823631 -237432952 + ORSL DNA AcHobo 221 273 -2 2393 107 0 0 chr2 15823897 15824206 -237432377 - AluSx SINE Alu -3 309 1 2142 141 0 0 chr2 15825169 15825468 -237431115 + AluSx SINE Alu 1 299 -13 2056 132 4 0 chr2 15825485 15825793 -237430790 + AluSx SINE Alu 1 309 0 607 346 24 8 chr2 15825801 15826055 -237430528 - L3 LINE CR1 -25 1552 1295 2267 115 0 7 chr2 15826251 15826555 -237430028 + AluSg SINE Alu 1 302 -8 547 242 194 5 chr2 15826843 15827029 -237429554 + MIR SINE MIR 30 250 -12 2210 111 20 3 chr2 15827479 15827777 -237428806 - AluSx SINE Alu -9 303 1 2343 67 17 3 chr2 15828029 15828329 -237428254 - AluY SINE Alu -7 304 1 205 273 15 15 chr2 15829261 15829327 -237427256 + L3 LINE CR1 878 943 -634 186 336 115 26 chr2 15829410 15829523 -237427060 + MIR SINE MIR 12 134 -128 634 277 184 0 chr2 15830202 15830408 -237426175 - MIR SINE MIR -4 258 15 255 346 122 33 chr2 15830882 15831096 -237425487 + MIR SINE MIR 25 257 -5 547 299 29 15 chr2 15831117 15831321 -237425262 - L3 LINE CR1 -191 1386 1180 375 387 53 27 chr2 15832170 15832545 -237424038 + L3b LINE CR1 1123 1507 -76 347 203 38 0 chr2 15832990 15833069 -237423514 + Tigger3(Golem) DNA MER2_type 1 82 -2947 * 1116 158 92 79 chr2 15833067 15833091 -237423492 + Tigger3(Golem) DNA MER2_type 2721 2743 -285 2042 156 0 0 chr2 15833091 15833386 -237423197 - AluSx SINE Alu -17 295 1 1116 158 92 79 chr2 15833386 15833431 -237423152 + Tigger3(Golem) DNA MER2_type 2743 2786 -242 2206 68 0 90 chr2 15833431 15833798 -237422785 - AluSg SINE Alu 0 339 1 183 42 0 0 chr2 15833799 15833823 -237422760 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2208 98 3 3 chr2 15833823 15834109 -237422474 - AluSq SINE Alu -27 286 1 1116 158 92 79 chr2 15834109 15834338 -237422245 + Tigger3(Golem) DNA MER2_type 2785 3028 0 222 283 0 0 chr2 15834338 15834398 -237422185 + (TATG)n Simple_repeat Simple_repeat 3 62 0 2332 231 66 21 chr2 15834420 15834983 -237421600 + MER82 DNA MER2_type 7 594 -59 890 179 19 12 chr2 15834985 15835147 -237421436 - AluSp SINE Alu -16 297 135 260 254 16 0 chr2 15835147 15835210 -237421373 + MER82 DNA MER2_type 589 652 -1 264 161 37 0 chr2 15835664 15835745 -237420838 + (TG)n Simple_repeat Simple_repeat 1 84 0 893 291 42 0 chr2 15835801 15836042 -237420541 + MIR SINE MIR 12 262 0 324 87 0 0 chr2 15836618 15836664 -237419919 - Alu SINE Alu -254 46 1 246 160 0 20 chr2 15836727 15836777 -237419806 - L2 LINE L2 -1 3312 3264 2006 141 0 35 chr2 15837076 15837388 -237419195 + AluSx SINE Alu 1 301 -11 574 186 0 0 chr2 15837729 15837831 -237418752 + MLT1I LTR MaLR 308 409 0 270 272 123 41 chr2 15838710 15838850 -237417733 - MIR SINE MIR -68 140 23 2175 121 6 19 chr2 15839349 15839664 -237416919 + AluSx SINE Alu 1 311 -1 1861 108 76 0 chr2 15839880 15840168 -237416415 + AluSx SINE Alu 1 310 -2 1137 145 19 39 chr2 15841621 15841655 -237414928 + AluSg/x SINE Alu 106 139 -173 2261 124 0 0 chr2 15841655 15841954 -237414629 + AluSx SINE Alu 1 299 -13 1137 145 19 39 chr2 15841954 15842126 -237414457 + AluSg/x SINE Alu 139 308 -4 407 287 102 37 chr2 15842182 15842877 -237413706 - L1ME4a LINE L1 -113 6008 5219 2115 133 0 7 chr2 15843127 15843427 -237413156 - AluJb SINE Alu -14 298 1 200 111 28 0 chr2 15843516 15843552 -237413031 + (TG)n Simple_repeat Simple_repeat 2 38 0 1056 195 180 0 chr2 15843785 15844057 -237412526 - MSTD LTR MaLR 0 396 76 3076 131 23 4 chr2 15844140 15844627 -237411956 + MER41E LTR ERV1 1 496 -16 376 200 12 12 chr2 15844618 15844698 -237411885 - MSTD LTR MaLR -316 80 1 * 218 237 301 11 chr2 15844969 15845062 -237411521 - MIR SINE MIR -73 135 16 276 274 27 0 chr2 15846196 15846269 -237410314 - MIR SINE MIR -87 175 101 216 135 0 0 chr2 15850114 15850151 -237406432 + (T)n Simple_repeat Simple_repeat 1 37 0 543 270 220 10 chr2 15851360 15851560 -237405023 - MIR SINE MIR -1 261 20 231 167 0 0 chr2 15851632 15851674 -237404909 + (TA)n Simple_repeat Simple_repeat 2 43 0 2300 103 0 0 chr2 15851680 15851982 -237404601 - AluSq SINE Alu -11 302 1 203 175 0 0 chr2 15852173 15852213 -237404370 + GA-rich Low_complexity Low_complexity 3 42 0 194 287 53 43 chr2 15853806 15853900 -237402683 - MIR SINE MIR -87 175 81 211 292 92 0 chr2 15854400 15854465 -237402118 + L3 LINE CR1 1265 1335 -242 238 273 45 34 chr2 15854639 15854727 -237401856 - MIR SINE MIR -60 148 60 2208 117 0 7 chr2 15854762 15855061 -237401522 - AluSc SINE Alu -12 297 1 219 353 69 0 chr2 15856490 15856592 -237399991 + L2 LINE L2 3146 3254 -18 3792 150 93 50 chr2 15857373 15858315 -237398268 - THE1C-int LTR MaLR -597 983 1 2523 112 11 16 chr2 15858315 15858691 -237397892 - THE1C LTR MaLR 0 375 2 2642 237 38 3 chr2 15858692 15859275 -237397308 + MER82 DNA MER2_type 45 647 -6 2110 141 3 3 chr2 15859611 15859910 -237396673 + AluSx SINE Alu 1 299 -13 482 318 103 20 chr2 15861718 15861913 -237394670 - MIR SINE MIR -15 247 37 185 289 58 0 chr2 15862536 15862588 -237393995 + L2 LINE L2 3217 3271 -1 612 167 0 0 chr2 15862642 15862744 -237393839 + MER81 DNA DNA 7 108 -6 271 333 72 56 chr2 15862751 15862940 -237393643 - L2 LINE L2 -21 3251 3067 1516 51 0 0 chr2 15862940 15863117 -237393466 - AluY SINE Alu -14 297 121 271 333 72 56 chr2 15863117 15863359 -237393224 - L2 LINE L2 -205 3067 2813 330 211 0 0 chr2 15863468 15863525 -237393058 - L2 LINE L2 -1 3271 3215 460 211 238 7 chr2 15865004 15865151 -237391432 + MER5A DNA MER1_type 9 189 0 680 222 0 81 chr2 15865159 15865344 -237391239 + MER5B DNA MER1_type 1 170 -8 582 278 22 120 chr2 15865521 15865747 -237390836 + L2 LINE L2 2981 3167 -105 1958 88 4 0 chr2 15865747 15865996 -237390587 - AluSc SINE Alu -45 264 15 582 278 22 120 chr2 15865996 15866093 -237390490 + L2 LINE L2 3167 3272 0 206 333 43 0 chr2 15866100 15866169 -237390414 - L2 LINE L2 -64 3249 3178 248 283 109 0 chr2 15867747 15867885 -237388698 + L1ME1 LINE L1 3006 3158 -2988 631 122 8 15 chr2 15867885 15868123 -237388460 + AluSx SINE Alu 19 306 -6 6482 218 43 81 chr2 15868129 15868221 -237388362 + L1ME1 LINE L1 3170 3264 -2902 2440 180 13 15 chr2 15868221 15868683 -237387900 + MER65C LTR ERV1 1 461 0 6482 218 43 81 chr2 15868683 15870124 -237386459 + L1ME1 LINE L1 3264 4758 -1408 2191 122 10 10 chr2 15870124 15870436 -237386147 + AluSx SINE Alu 1 312 0 6482 218 43 81 chr2 15870436 15870978 -237385605 + L1ME1 LINE L1 4758 5319 -847 1606 198 44 3 chr2 15870978 15871271 -237385312 + AluJo SINE Alu 1 305 -7 6482 218 43 81 chr2 15871271 15871663 -237384920 + L1ME1 LINE L1 5319 5724 -442 2407 113 25 22 chr2 15871663 15872026 -237384557 + THE1B LTR MaLR 1 364 0 6482 218 43 81 chr2 15872026 15872063 -237384520 + L1ME1 LINE L1 5724 5761 -405 2389 113 0 0 chr2 15872063 15872373 -237384210 + AluSx SINE Alu 1 310 -2 6482 218 43 81 chr2 15872373 15872614 -237383969 + L1ME1 LINE L1 5761 6010 -156 2543 81 3 0 chr2 15872614 15872922 -237383661 + AluSp SINE Alu 5 313 0 6482 218 43 81 chr2 15872922 15872984 -237383599 + L1ME1 LINE L1 6010 6073 -93 626 217 9 0 chr2 15872984 15873099 -237383484 + FLAM_A SINE Alu 1 116 -17 266 85 0 21 chr2 15873108 15873155 -237383428 + (TA)n Simple_repeat Simple_repeat 1 46 0 6482 218 43 81 chr2 15873155 15873218 -237383365 + L1ME1 LINE L1 6081 5929 -237 2227 115 26 0 chr2 15873218 15873523 -237383060 + AluSq SINE Alu 1 313 0 6482 218 43 81 chr2 15873523 15873616 -237382967 + L1ME1 LINE L1 5928 6023 -143 2207 114 0 0 chr2 15873616 15873913 -237382670 + AluSx SINE Alu 1 297 -15 661 200 19 19 chr2 15873924 15874079 -237382504 + L1MA10 LINE L1 6180 6334 0 248 299 60 22 chr2 15874129 15874263 -237382320 + HAL1 LINE L1 1810 1948 -559 2222 102 7 0 chr2 15874288 15874571 -237382012 + AluSx SINE Alu 1 285 -27 885 285 131 53 chr2 15874971 15875732 -237380851 + L2 LINE L2 1863 2683 -631 186 316 130 52 chr2 15875777 15875981 -237380602 + L2 LINE L2 3005 3236 -77 2139 148 0 0 chr2 15875981 15876292 -237380291 - AluSx SINE Alu -1 311 1 186 316 130 52 chr2 15876292 15876345 -237380238 + L2 LINE L2 3236 3283 -30 464 281 20 48 chr2 15876345 15876491 -237380092 + MIR3 SINE MIR 4 145 -63 25 0 0 0 chr2 15877100 15877125 -237379458 + AT_rich Low_complexity Low_complexity 1 25 0 333 273 114 38 chr2 15877479 15877743 -237378840 + HAL1 LINE L1 2220 2503 -4 742 149 24 34 chr2 15877750 15877990 -237378593 + GA-rich Low_complexity Low_complexity 1 237 0 216 0 0 0 chr2 15878095 15878119 -237378464 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2306 73 0 3 chr2 15878119 15878406 -237378177 - AluY SINE Alu -25 286 1 513 264 16 8 chr2 15879184 15879305 -237377278 - MIR3 SINE MIR -49 159 38 369 267 68 62 chr2 15879461 15879569 -237377014 - L1ME4a LINE L1 -213 5908 5797 2247 99 0 0 chr2 15879569 15879871 -237376712 + AluSx SINE Alu 2 303 -9 369 267 68 62 chr2 15879871 15879908 -237376675 - L1ME4a LINE L1 -324 5797 5762 1618 171 7 30 chr2 15880695 15880999 -237375584 - AluJo SINE Alu -15 297 1 504 296 84 47 chr2 15881111 15881517 -237375066 - HAL1 LINE L1 -264 2243 1823 944 288 43 29 chr2 15881547 15881853 -237374730 + MLT1I LTR MaLR 57 352 -57 1999 186 28 0 chr2 15881919 15882274 -237374309 + MLT1A1 LTR MaLR 1 365 0 1336 265 79 36 chr2 15882298 15882929 -237373654 - HAL1 LINE L1 -767 1740 1083 2251 91 7 3 chr2 15883294 15883601 -237372982 + AluSc SINE Alu 1 308 -1 1781 139 0 7 chr2 15884173 15884461 -237372122 - AluJb SINE Alu -1 311 26 386 318 40 0 chr2 15885027 15885153 -237371430 - MIR3 SINE MIR -6 202 72 378 243 18 36 chr2 15887040 15887151 -237369432 + L3 LINE CR1 1312 1420 -157 205 256 0 0 chr2 15887169 15887208 -237369375 - L2 LINE L2 -20 3293 3255 388 285 73 29 chr2 15887233 15887370 -237369213 - MIR3 SINE MIR -63 145 3 1064 207 122 89 chr2 15887383 15887775 -237368808 - MLT1G1 LTR MaLR -98 497 93 2181 144 58 32 chr2 15887976 15888512 -237368071 - MLT2A2 LTR ERVL 0 554 3 199 364 82 0 chr2 15888517 15888627 -237367956 - L2 LINE L2 -575 2739 2621 313 319 64 0 chr2 15889239 15889333 -237367250 - MLT1G1 LTR MaLR -489 106 7 1700 230 49 37 chr2 15889420 15889489 -237367094 - MER119 DNA MER1_type -38 545 478 216 0 0 0 chr2 15889489 15889513 -237367070 + (TA)n Simple_repeat Simple_repeat 1 24 0 1700 230 49 37 chr2 15889513 15889880 -237366703 - MER119 DNA MER1_type -105 478 71 2030 130 10 0 chr2 15889880 15890188 -237366395 + AluSq SINE Alu 1 311 -2 1700 230 49 37 chr2 15890188 15890260 -237366323 - MER119 DNA MER1_type -512 71 1 2239 103 0 0 chr2 15890705 15891006 -237365577 + AluSx SINE Alu 2 302 -10 2758 128 25 11 chr2 15892173 15892292 -237364291 - L1PA16 LINE L1 0 6166 6050 2453 44 0 0 chr2 15892292 15892588 -237363995 - AluY SINE Alu -15 296 1 2758 128 25 11 chr2 15892588 15892913 -237363670 - L1PA16 LINE L1 -116 6050 5716 200 125 125 0 chr2 15892918 15892958 -237363625 - MIR SINE MIR -62 146 102 1977 127 0 0 chr2 15894117 15894423 -237362160 - AluSq SINE Alu 0 306 1 200 139 0 23 chr2 15894712 15894755 -237361828 + (TCC)n Simple_repeat Simple_repeat 1 42 0 232 108 0 0 chr2 15894809 15894846 -237361737 - MIR SINE MIR -67 141 105 186 397 25 0 chr2 15895047 15895168 -237361415 + MIR SINE MIR 114 237 -25 1119 236 63 0 chr2 15895202 15895439 -237361144 + MIR SINE MIR 10 261 -1 1277 177 104 19 chr2 15895590 15895850 -237360733 + AluJo SINE Alu 1 282 -30 22 0 0 0 chr2 15895850 15895872 -237360711 + AT_rich Low_complexity Low_complexity 1 22 0 268 333 99 58 chr2 15895931 15896243 -237360340 - L2 LINE L2 -6 3266 2942 282 313 72 45 chr2 15897007 15897254 -237359329 + MIR3 SINE MIR 5 253 -9 304 299 112 19 chr2 15897349 15897456 -237359127 - L2 LINE L2 0 3272 3156 2518 107 13 16 chr2 15897693 15898067 -237358516 - THE1C LTR MaLR -2 373 1 4646 131 33 11 chr2 15898067 15898800 -237357783 - THE1C-int LTR MaLR 0 1580 832 192 298 18 0 chr2 15899509 15899566 -237357017 - L3 LINE CR1 -5 1572 1515 1597 186 9 25 chr2 15899616 15899939 -237356644 - 7SLRNA srpRNA srpRNA -1 319 2 679 226 66 104 chr2 15899976 15900264 -237356319 - L2 LINE L2 0 3313 3037 2266 105 0 0 chr2 15900389 15900695 -237355888 + AluSg SINE Alu 1 306 -4 191 279 39 126 chr2 15900772 15900799 -237355784 + MIR SINE MIR 8 36 -226 2082 110 0 7 chr2 15900799 15901091 -237355492 + AluSx SINE Alu 1 290 -22 191 279 39 126 chr2 15901091 15901125 -237355458 + MIR SINE MIR 36 71 -191 2307 84 3 0 chr2 15901125 15901424 -237355159 + AluSp SINE Alu 1 300 -13 191 279 39 126 chr2 15901424 15901562 -237355021 + MIR SINE MIR 71 184 -78 1523 174 4 7 chr2 15901562 15901838 -237354745 - AluJb SINE Alu -37 275 1 191 279 39 126 chr2 15901838 15901890 -237354693 + MIR SINE MIR 184 239 -23 297 305 63 42 chr2 15902670 15902832 -237353751 + MIR3 SINE MIR 20 187 -21 1855 201 0 79 chr2 15902908 15903069 -237353514 + MSTD LTR MaLR 3 175 -221 4957 96 39 0 chr2 15903069 15903734 -237352849 + LTR8 LTR ERV1 1 691 0 1855 201 0 79 chr2 15903734 15903918 -237352665 + MSTD LTR MaLR 175 310 -86 2311 87 3 0 chr2 15903918 15904230 -237352353 + AluSp SINE Alu 1 313 0 1855 201 0 79 chr2 15904230 15904311 -237352272 + MSTD LTR MaLR 310 396 0 333 316 66 0 chr2 15904316 15904452 -237352131 + MIR SINE MIR 47 191 -71 205 281 31 0 chr2 15904646 15904710 -237351873 + L2 LINE L2 3246 3311 -2 311 175 78 117 chr2 15905677 15905737 -237350846 - MER81 DNA DNA 0 114 58 2079 114 3 0 chr2 15905737 15906044 -237350539 + AluSx SINE Alu 1 308 -4 311 175 78 117 chr2 15906044 15906086 -237350497 - MER81 DNA DNA -56 58 16 2169 97 3 0 chr2 15906646 15906954 -237349629 + AluSx SINE Alu 1 309 -3 2081 108 3 0 chr2 15907838 15908156 -237348427 + AluSq SINE Alu 1 319 0 821 205 0 0 chr2 15909147 15909303 -237347280 + AluSg/x SINE Alu 120 275 -35 20073 51 3 1 chr2 15909305 15912576 -237344007 + L1PA5 LINE L1 2875 6149 -5 26 0 0 0 chr2 15912577 15912603 -237343980 + AT_rich Low_complexity Low_complexity 1 26 0 318 185 380 0 chr2 15912606 15912698 -237343885 + MER5B DNA MER1_type 49 175 -3 279 362 43 5 chr2 15912726 15912911 -237343672 + L2 LINE L2 2275 2466 -848 425 244 215 29 chr2 15913401 15913610 -237342973 + MIR SINE MIR 7 254 -8 1876 139 0 23 chr2 15913613 15913915 -237342668 - AluJb SINE Alu -17 295 1 24 0 0 0 chr2 15913921 15913945 -237342638 + AT_rich Low_complexity Low_complexity 1 24 0 232 254 70 0 chr2 15914241 15914312 -237342271 + MIR SINE MIR 121 196 -66 180 175 140 70 chr2 15914374 15914431 -237342152 - MIR SINE MIR -65 197 137 1549 212 107 21 chr2 15915217 15915647 -237340936 - MLT1C LTR MaLR 0 467 1 2463 51 0 0 chr2 15915667 15915963 -237340620 - AluY SINE Alu -15 296 1 321 293 70 38 chr2 15915966 15916123 -237340460 - L2 LINE L2 -10 3262 3101 1972 144 0 6 chr2 15916438 15916751 -237339832 - AluSx SINE Alu -1 311 1 228 274 169 31 chr2 15917960 15918111 -237338472 + MIR SINE MIR 1 156 -65 230 219 0 0 chr2 15918144 15918185 -237338398 - MER69 DNA AcHobo -954 272 232 * 5864 133 37 47 chr2 15918183 15918950 -237337633 - Tigger1 DNA MER2_type -1406 1012 256 2382 81 10 0 chr2 15918950 15919260 -237337323 + AluSq SINE Alu 1 313 0 5864 133 37 47 chr2 15919260 15919513 -237337070 - Tigger1 DNA MER2_type -2162 256 2 263 317 29 19 chr2 15920281 15920385 -237336198 + MIR SINE MIR 30 134 -74 1555 194 10 0 chr2 15920607 15920901 -237335682 + AluJb SINE Alu 1 297 -15 208 348 104 26 chr2 15921541 15921656 -237334927 + MIR3 SINE MIR 7 130 -78 1927 148 3 0 chr2 15921660 15921970 -237334613 - AluSx SINE Alu -1 311 1 346 231 29 29 chr2 15922230 15922334 -237334249 + MIR SINE MIR 49 152 -110 361 174 72 0 chr2 15923461 15923530 -237333053 - MER3 DNA MER1_type 0 209 136 2180 130 28 47 chr2 15923538 15923802 -237332781 + L1MB4 LINE L1 5758 6013 -167 1224 83 193 0 chr2 15923802 15923994 -237332589 - MER30 DNA MER1_type 0 230 2 2180 130 28 47 chr2 15923994 15924153 -237332430 + L1MB4 LINE L1 6013 6173 -7 768 203 44 0 chr2 15924155 15924313 -237332270 - MER3 DNA MER1_type -44 165 1 443 259 40 75 chr2 15925499 15925673 -237330910 - MIR3 SINE MIR -5 203 36 1615 129 4 0 chr2 15925744 15925985 -237330598 - AluSq SINE Alu -14 299 58 1654 101 8 8 chr2 15925986 15926224 -237330359 - AluSx SINE Alu -74 238 1 29 28 0 0 chr2 15926313 15926349 -237330234 + AT_rich Low_complexity Low_complexity 1 36 0 2322 87 0 0 chr2 15926359 15926657 -237329926 + AluY SINE Alu 1 298 -13 353 328 86 11 chr2 15926694 15926880 -237329703 + MIR SINE MIR 20 219 -43 310 297 34 23 chr2 15927123 15927271 -237329312 + MIR SINE MIR 1 144 -67 2163 107 7 0 chr2 15927473 15927772 -237328811 - AluSx SINE Alu -11 301 1 229 297 57 97 chr2 15928083 15928258 -237328325 - L3 LINE CR1 -14 1563 1396 227 100 0 25 chr2 15928283 15928323 -237328260 + (TTTTC)n Simple_repeat Simple_repeat 3 41 0 807 189 0 0 chr2 15928328 15928460 -237328123 - FLAM_C SINE Alu -1 132 1 1832 157 0 13 chr2 15928464 15928777 -237327806 - AluJb SINE Alu -1 311 3 871 253 64 40 chr2 15928859 15929129 -237327454 - MIR SINE MIR 0 262 9 2303 116 3 0 chr2 15929625 15929936 -237326647 - AluSx SINE Alu 0 312 1 261 0 0 0 chr2 15930009 15930038 -237326545 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2245 90 7 0 chr2 15930040 15930319 -237326264 - AluSq SINE Alu -31 282 2 181 208 19 75 chr2 15930638 15930691 -237325892 + L2 LINE L2 3241 3290 -23 209 56 0 56 chr2 15932894 15932930 -237323653 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 198 270 0 0 chr2 15932956 15933030 -237323553 + (TG)n Simple_repeat Simple_repeat 1 74 0 529 197 0 22 chr2 15934008 15934191 -237322392 + (TG)n Simple_repeat Simple_repeat 2 180 0 540 204 0 0 chr2 15934219 15934395 -237322188 + (TG)n Simple_repeat Simple_repeat 2 177 0 605 193 0 6 chr2 15934412 15934593 -237321990 + (TG)n Simple_repeat Simple_repeat 1 180 0 537 217 0 0 chr2 15934604 15934784 -237321799 + (TG)n Simple_repeat Simple_repeat 1 180 0 1947 132 0 0 chr2 15935679 15935951 -237320632 - AluSq SINE Alu -24 289 18 479 314 52 13 chr2 15935976 15936129 -237320454 - MIR SINE MIR -12 250 92 2242 91 13 17 chr2 15936762 15937060 -237319523 - AluSx SINE Alu -15 297 1 339 267 104 7 chr2 15937148 15937283 -237319300 + MIR3 SINE MIR 54 201 -7 918 127 0 0 chr2 15937780 15937938 -237318645 + (CA)n Simple_repeat Simple_repeat 1 158 0 2394 96 0 0 chr2 15937960 15938261 -237318322 + AluSg SINE Alu 1 301 -9 339 277 32 0 chr2 15938589 15938683 -237317900 - MIR3 SINE MIR -5 203 107 1549 219 58 11 chr2 15939254 15939601 -237316982 + MLT1A1 LTR MaLR 1 363 -2 2201 118 0 3 chr2 15939605 15939911 -237316672 - AluSx SINE Alu -7 305 1 281 293 0 13 chr2 15939938 15940013 -237316570 - MIR SINE MIR -63 145 72 296 268 60 104 chr2 15940362 15940545 -237316038 + MIR SINE MIR 77 251 -11 2342 107 0 0 chr2 15940887 15941187 -237315396 - AluSx SINE Alu -10 302 3 339 236 0 14 chr2 15941214 15941286 -237315297 + MIR SINE MIR 79 149 -113 963 114 0 0 chr2 15941439 15941570 -237315013 - FLAM_C SINE Alu -2 131 1 213 39 0 0 chr2 15941709 15941735 -237314848 + (GA)n Simple_repeat Simple_repeat 1 26 0 428 247 120 27 chr2 15941736 15941886 -237314697 + MIR SINE MIR 8 171 -91 312 302 0 0 chr2 15942365 15942451 -237314132 + MIR3 SINE MIR 114 199 -9 933 159 7 7 chr2 15942771 15942999 -237313584 + CT-rich Low_complexity Low_complexity 1 228 -339 2362 103 0 13 chr2 15942999 15943310 -237313273 - AluSp SINE Alu -6 307 1 933 159 7 7 chr2 15943310 15943338 -237313245 + CT-rich Low_complexity Low_complexity 227 567 0 2063 154 10 0 chr2 15943338 15943644 -237312939 - AluSx SINE Alu -3 309 1 360 152 0 0 chr2 15943803 15943869 -237312714 + GA-rich Low_complexity Low_complexity 1 66 0 2005 113 0 0 chr2 15943980 15944245 -237312338 + AluSx SINE Alu 5 269 -43 189 0 0 0 chr2 15944272 15944293 -237312290 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 181 343 55 14 chr2 15944619 15944692 -237311891 - L2 LINE L2 -39 3274 3199 294 361 68 8 chr2 15944897 15945030 -237311553 + L2 LINE L2 3124 3264 -8 253 287 93 46 chr2 15945032 15945140 -237311443 - MIR SINE MIR -75 133 21 721 134 29 29 chr2 15945306 15945478 -237311105 + CT-rich Low_complexity Low_complexity 3 174 0 747 180 0 180 chr2 15945548 15945798 -237310785 - AluSp SINE Alu -107 206 2 1755 123 8 0 chr2 15945851 15946095 -237310488 + AluSx SINE Alu 53 298 -14 252 345 88 9 chr2 15946240 15946353 -237310230 - MIR3 SINE MIR -43 165 44 369 43 0 0 chr2 15946368 15946415 -237310168 + (CA)n Simple_repeat Simple_repeat 2 48 0 354 271 47 0 chr2 15947099 15947206 -237309377 - MIR SINE MIR -59 203 92 262 258 237 0 chr2 15947496 15947589 -237308994 + L2 LINE L2 3158 3272 0 * 326 299 95 47 chr2 15947578 15947789 -237308794 - L2 LINE L2 -15 3257 3037 276 256 98 112 chr2 15947763 15948040 -237308543 + L3 LINE CR1 1268 1540 -37 * 2214 126 7 0 chr2 15948069 15948378 -237308205 - AluSp SINE Alu 0 313 3 189 276 0 17 chr2 15948951 15949009 -237307574 - MIR SINE MIR -67 141 85 227 288 0 27 chr2 15949298 15949371 -237307212 - L2 LINE L2 -215 3057 2987 408 269 30 0 chr2 15949379 15949651 -237306932 + (TCCA)n Simple_repeat Simple_repeat 1 280 0 231 224 28 0 chr2 15949671 15949778 -237306805 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 301 225 33 0 chr2 15949793 15949944 -237306639 + (TCCA)n Simple_repeat Simple_repeat 1 156 0 398 258 67 8 chr2 15949999 15950119 -237306464 - MIR SINE MIR -16 246 120 217 360 96 45 chr2 15950211 15950525 -237306058 + L2 LINE L2 2622 2951 -363 1830 194 35 30 chr2 15951098 15951470 -237305113 + MLT1A2 LTR MaLR 1 374 0 229 336 77 0 chr2 15951893 15951997 -237304586 + MIR SINE MIR 33 144 -64 736 205 0 0 chr2 15952303 15952425 -237304158 + AluJo SINE Alu 2 123 -189 186 133 0 0 chr2 15952426 15952456 -237304127 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1068 193 5 0 chr2 15952467 15952654 -237303929 + AluJo SINE Alu 118 305 -7 222 152 0 65 chr2 15953104 15953150 -237303433 + MIR SINE MIR 210 252 -10 * 300 136 0 0 chr2 15953122 15953166 -237303417 + L2 LINE L2 3270 3313 0 208 143 29 0 chr2 15953612 15953647 -237302936 + GA-rich Low_complexity Low_complexity 1 36 0 369 142 39 39 chr2 15953658 15953813 -237302770 + (CAGAGA)n Simple_repeat Simple_repeat 2 156 0 213 320 48 63 chr2 15954811 15955017 -237301566 + L2 LINE L2 2637 2839 -475 1499 165 8 8 chr2 15956551 15956799 -237299784 + AluJo SINE Alu 33 280 -32 369 306 98 6 chr2 15956975 15957148 -237299435 + MIR SINE MIR 74 262 0 352 199 114 121 chr2 15957545 15957711 -237298872 + MIR SINE MIR 19 183 -79 522 57 0 0 chr2 15958036 15958106 -237298477 + (TTTC)n Simple_repeat Simple_repeat 4 73 0 244 145 0 48 chr2 15958109 15958171 -237298412 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 1186 77 6 17 chr2 15958171 15958352 -237298231 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1921 151 4 0 chr2 15958353 15958631 -237297952 - AluSx SINE Alu -33 279 1 422 268 183 0 chr2 15958877 15959030 -237297553 + MER5A DNA MER1_type 9 189 0 384 226 9 52 chr2 15959834 15959949 -237296634 - Charlie2 DNA MER1_type -2634 148 39 432 288 30 15 chr2 15959978 15960110 -237296473 - MIR SINE MIR -20 242 109 231 152 38 25 chr2 15960478 15960557 -237296026 + CT-rich Low_complexity Low_complexity 2 81 0 252 305 0 0 chr2 15960961 15961020 -237295563 + L2 LINE L2 3209 3267 -5 2232 125 3 6 chr2 15961246 15961559 -237295024 + AluSx SINE Alu 1 312 0 250 296 148 0 chr2 15961576 15961691 -237294892 + MIR SINE MIR 2 133 -129 221 305 86 19 chr2 15961897 15962002 -237294581 - MIR SINE MIR -74 134 23 274 377 31 8 chr2 15962065 15962195 -237294388 + MIR3 SINE MIR 70 202 -6 261 264 25 83 chr2 15962336 15962457 -237294126 + L2 LINE L2 3151 3264 -8 805 257 8 9 chr2 15962668 15962883 -237293700 - MIR SINE MIR -6 256 42 433 229 53 23 chr2 15962871 15963002 -237293581 - MIR SINE MIR -19 243 109 * 576 200 15 37 chr2 15963081 15963216 -237293367 + MIR SINE MIR 19 150 -112 21 0 0 0 chr2 15963672 15963693 -237292890 + AT_rich Low_complexity Low_complexity 1 21 0 187 336 8 69 chr2 15963937 15964068 -237292515 - L2 LINE L2 -5 3308 3186 190 266 125 0 chr2 15964137 15964201 -237292382 + MIR SINE MIR 84 155 -107 945 248 81 0 chr2 15964204 15964426 -237292157 + MIR SINE MIR 2 241 -21 207 280 65 19 chr2 15964447 15964554 -237292029 + MIR SINE MIR 148 259 -3 623 259 24 6 chr2 15964636 15964806 -237291777 + MER5B DNA MER1_type 3 175 -3 1918 132 63 0 chr2 15964850 15965137 -237291446 - AluSx SINE Alu -7 305 1 729 295 106 73 chr2 15965210 15965930 -237290653 - L2 LINE L2 -9 3304 2499 2193 126 19 43 chr2 15965930 15966303 -237290280 - THE1B LTR MaLR 0 364 1 729 295 106 73 chr2 15966303 15966633 -237289950 - L2 LINE L2 -814 2499 2181 321 336 0 8 chr2 15967089 15967208 -237289375 + MIR3 SINE MIR 70 187 -21 379 239 68 34 chr2 15967656 15967773 -237288810 - L1MC5 LINE L1 -910 7051 6931 308 242 105 52 chr2 15967740 15967802 -237288781 - L1MC4 LINE L1 -969 7073 7016 * 2148 128 23 0 chr2 15967802 15968107 -237288476 - AluSx SINE Alu 0 312 1 308 242 105 52 chr2 15968107 15968132 -237288451 - L1MC4 LINE L1 -1026 7016 6994 1910 109 0 8 chr2 15968132 15968389 -237288194 - AluSg SINE Alu -6 304 50 308 242 105 52 chr2 15968389 15968453 -237288130 - L1MC4 LINE L1 -1048 6994 6913 420 250 158 8 chr2 15968458 15968578 -237288005 - MIR SINE MIR -71 191 54 246 309 136 0 chr2 15968837 15968947 -237287636 - L2 LINE L2 -239 3033 2909 24 32 0 0 chr2 15969299 15969330 -237287253 + AT_rich Low_complexity Low_complexity 1 31 0 245 250 147 22 chr2 15969366 15969502 -237287081 + L1ME4a LINE L1 5636 5788 -333 1862 177 7 0 chr2 15969579 15969889 -237286694 - AluJb SINE Alu 0 312 1 300 196 196 38 chr2 15970006 15970139 -237286444 + L1ME4a LINE L1 5967 6120 -1 243 333 57 57 chr2 15971615 15971774 -237284809 - L2 LINE L2 -2 3270 3112 217 323 118 11 chr2 15972336 15972429 -237284154 - L2 LINE L2 -1 3271 3169 740 161 25 0 chr2 15972614 15972732 -237283851 - FLAM_C SINE Alu -11 122 2 1976 140 0 7 chr2 15972950 15973250 -237283333 - AluSx SINE Alu -14 298 1 2356 110 0 0 chr2 15973460 15973769 -237282814 - AluSx SINE Alu -3 309 1 218 157 20 20 chr2 15974785 15974836 -237281747 + (GAGTG)n Simple_repeat Simple_repeat 1 51 0 191 271 157 0 chr2 15974889 15974959 -237281624 + MIR3 SINE MIR 127 207 -1 614 329 69 0 chr2 15974977 15975266 -237281317 + L1ME4a LINE L1 5566 5874 -247 1914 147 35 0 chr2 15975469 15975754 -237280829 + AluJb SINE Alu 11 305 -7 296 273 127 33 chr2 15977738 15977888 -237278695 - MIR3 SINE MIR -29 179 16 297 208 26 11 chr2 16179538 16179647 -237076936 - AluJ/monomer SINE Alu -253 46 2 2285 82 0 10 chr2 16179877 16180181 -237076402 - AluSx SINE Alu -11 301 1 231 197 28 70 chr2 16180589 16180660 -237075923 + MIR SINE MIR 54 122 -86 310 239 18 64 chr2 16181166 16181275 -237075308 + MIR SINE MIR 43 146 -116 2266 91 0 3 chr2 16181285 16181594 -237074989 - AluSg SINE Alu -2 308 1 202 274 0 0 chr2 16181784 16181835 -237074748 + (TG)n Simple_repeat Simple_repeat 1 51 0 499 325 69 35 chr2 16182185 16182619 -237073964 + L1ME4a LINE L1 5293 5754 -367 1704 147 63 0 chr2 16182619 16182904 -237073679 + AluSx SINE Alu 6 308 -4 499 325 69 35 chr2 16182904 16183066 -237073517 + L1ME4a LINE L1 5754 5909 -212 665 314 114 29 chr2 16184512 16184593 -237071990 + L2 LINE L2 2521 2594 -719 1968 176 52 6 chr2 16184593 16184940 -237071643 + MLT1A1 LTR MaLR 1 363 -2 665 314 114 29 chr2 16184940 16185336 -237071247 + L2 LINE L2 2594 3046 -267 1864 126 0 0 chr2 16185444 16185713 -237070870 + AluSx SINE Alu 2 270 -42 1697 132 0 45 chr2 16186030 16186164 -237070419 + AluJo SINE Alu 9 147 -163 2095 118 14 0 chr2 16186164 16186460 -237070123 + AluSq SINE Alu 2 301 -12 1697 132 0 45 chr2 16186460 16186640 -237069943 + AluJo SINE Alu 147 310 0 216 319 29 14 chr2 16186674 16186743 -237069840 - MIR3 SINE MIR -126 82 13 22 0 0 0 chr2 16186812 16186834 -237069749 + AT_rich Low_complexity Low_complexity 1 22 0 261 247 47 24 chr2 16187778 16187863 -237068720 - MIR SINE MIR -80 128 42 1571 120 12 4 chr2 16188952 16189194 -237067389 + AluJo SINE Alu 63 306 -6 283 335 42 42 chr2 16189627 16189794 -237066789 + MIR3 SINE MIR 33 199 -9 617 212 66 100 chr2 16190194 16190453 -237066130 - MIR SINE MIR 0 262 13 210 346 56 0 chr2 16190605 16190712 -237065871 - L2 LINE L2 0 3272 3160 248 281 16 0 chr2 16190718 16190782 -237065801 - L3 LINE CR1 -174 1403 1339 345 234 37 19 chr2 16190797 16190904 -237065679 + MER94 DNA DNA 18 126 -8 243 306 48 20 chr2 16190948 16191095 -237065488 - L3 LINE CR1 -298 1279 1129 220 328 164 35 chr2 16191499 16191816 -237064767 - L2 LINE L2 -88 3184 2827 208 297 178 10 chr2 16192519 16192620 -237063963 + MIR SINE MIR 40 157 -105 206 325 65 13 chr2 16192622 16192699 -237063884 + MIR SINE MIR 117 197 -65 303 316 85 17 chr2 16193003 16193180 -237063403 + L2 LINE L2 2708 2896 -418 313 260 80 20 chr2 16193642 16193742 -237062841 - MIR SINE MIR -93 169 64 543 256 16 8 chr2 16194728 16194857 -237061726 - MIR SINE MIR -113 149 20 305 336 67 0 chr2 16195123 16195242 -237061341 + L2 LINE L2 3146 3272 0 281 244 139 29 chr2 16195979 16196151 -237060432 + L1ME LINE L1 5592 5782 -339 1963 139 0 0 chr2 16196225 16196526 -237060057 - AluSq SINE Alu -12 301 1 358 219 55 202 chr2 16196728 16197075 -237059508 - L2 LINE L2 -20 3252 2957 2066 115 20 0 chr2 16197418 16197722 -237058861 - AluSg SINE Alu 0 310 1 408 333 213 30 chr2 16197826 16198144 -237058439 - L2 LINE L2 -415 2899 2641 1738 165 0 32 chr2 16198144 16198453 -237058130 + AluJo SINE Alu 1 299 -13 408 333 213 30 chr2 16198453 16199073 -237057510 - L2 LINE L2 -673 2641 1789 1389 205 106 54 chr2 16199380 16199824 -237056759 - MLT1C LTR MaLR 0 467 1 180 0 0 0 chr2 16200509 16200529 -237056054 + (TTGG)n Simple_repeat Simple_repeat 1 20 0 880 153 0 0 chr2 16200531 16200662 -237055921 - FRAM SINE Alu -23 153 23 213 39 0 0 chr2 16201214 16201240 -237055343 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 251 114 23 0 chr2 16201260 16201304 -237055279 + CT-rich Low_complexity Low_complexity 4 48 0 226 250 196 11 chr2 16201548 16201640 -237054943 + MIR SINE MIR 20 128 -80 211 217 0 22 chr2 16201744 16201790 -237054793 + L2 LINE L2 3265 3309 -4 2221 67 7 0 chr2 16202229 16202542 -237054041 + AluSp SINE Alu 1 315 0 222 150 0 0 chr2 16202563 16202603 -237053980 + (TTCCC)n Simple_repeat Simple_repeat 2 41 0 374 274 196 17 chr2 16203174 16203353 -237053230 + MIR SINE MIR 49 259 -3 2155 125 0 3 chr2 16204913 16205226 -237051357 - AluSx SINE Alu 0 312 1 2269 57 0 0 chr2 16205253 16205585 -237050998 - AluY SINE Alu 0 332 1 1651 187 0 10 chr2 16206281 16206586 -237049997 - AluJb SINE Alu -10 302 1 843 134 15 22 chr2 16207665 16207799 -237048784 + FLAM_C SINE Alu 1 133 0 4017 196 18 54 chr2 16207843 16208481 -237048102 - L1MB5 LINE L1 -36 6138 5479 2125 110 3 10 chr2 16208481 16208791 -237047792 - AluSq SINE Alu -3 310 3 4017 196 18 54 chr2 16208791 16209006 -237047577 - L1MB5 LINE L1 -695 5479 5258 1770 162 7 0 chr2 16209006 16209296 -237047287 - AluSx SINE Alu -20 292 1 4017 196 18 54 chr2 16209296 16209646 -237046937 - L1MB5 LINE L1 -916 5258 4964 622 264 38 50 chr2 16210035 16210296 -237046287 - MER46C DNA MER2_type -1 337 80 1175 142 16 129 chr2 16210330 16210640 -237045943 - AluJb SINE Alu -14 298 24 939 159 0 2 chr2 16210648 16210887 -237045696 - AluJb SINE Alu -8 304 22 261 0 0 0 chr2 16210903 16210932 -237045651 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2064 107 0 0 chr2 16210933 16211213 -237045370 - AluSx SINE Alu -32 280 1 231 169 73 140 chr2 16213234 16213412 -237043171 - L2 LINE L2 -190 3082 2917 317 206 21 202 chr2 16213467 16213533 -237043050 - L1MC4 LINE L1 0 8042 7966 2105 112 7 0 chr2 16213533 16213827 -237042756 - AluSx SINE Alu -16 296 1 317 206 21 202 chr2 16213827 16214003 -237042580 - L1MC4 LINE L1 -76 7966 7844 478 304 37 19 chr2 16214178 16214339 -237042244 - MIR SINE MIR -77 185 22 2005 125 3 28 chr2 16214343 16214663 -237041920 - AluSx SINE Alu 0 312 1 2025 132 0 3 chr2 16214665 16214969 -237041614 - AluSx SINE Alu -8 304 2 354 234 69 86 chr2 16215301 16215476 -237041107 + MIR SINE MIR 61 232 -30 475 262 39 0 chr2 16215707 16215810 -237040773 + L2 LINE L2 3199 3305 -8 2175 101 0 0 chr2 16215818 16216105 -237040478 + AluSq SINE Alu 8 294 -19 573 285 93 36 chr2 16216352 16216427 -237040156 - MLT1I LTR MaLR 0 409 340 1396 195 3 25 chr2 16216427 16216745 -237039838 + AluJo SINE Alu 2 312 0 573 285 93 36 chr2 16216745 16216971 -237039612 - MLT1I LTR MaLR -69 340 91 221 276 112 0 chr2 16217137 16217235 -237039348 - MIR3 SINE MIR -2 206 98 861 173 0 0 chr2 16217326 16217476 -237039107 + FRAM SINE Alu 12 161 -15 221 323 85 80 chr2 16217564 16217765 -237038818 - L2 LINE L2 -40 3232 3031 296 314 29 44 chr2 16218082 16218263 -237038320 - MIR SINE MIR -67 141 3 224 228 18 18 chr2 16218378 16218435 -237038148 + L2 LINE L2 3256 3312 -1 2140 121 0 0 chr2 16218554 16218861 -237037722 - AluY SINE Alu -4 307 1 247 336 84 17 chr2 16218917 16219036 -237037547 + MIR SINE MIR 49 175 -87 234 311 219 12 chr2 16219151 16219315 -237037268 + MIR SINE MIR 6 203 -59 235 208 0 0 chr2 16219727 16219780 -237036803 - MER91A DNA MER1_type -143 53 1 381 330 32 80 chr2 16220867 16221267 -237035316 - L2 LINE L2 -19 3253 2873 204 172 31 31 chr2 16221509 16221573 -237035010 + A-rich Low_complexity Low_complexity 6 69 0 2183 113 0 0 chr2 16221578 16221878 -237034705 + AluSx SINE Alu 1 300 -12 1030 215 14 14 chr2 16222138 16222357 -237034226 + MER20 DNA MER1_type 1 219 0 730 192 96 59 chr2 16222465 16222720 -237033863 + MLT1A2 LTR MaLR 1 351 -23 325 102 70 173 chr2 16223723 16223877 -237032706 - MLT1L LTR MaLR 0 577 449 375 225 23 78 chr2 16224211 16224340 -237032243 - MLT1L LTR MaLR -350 265 144 274 188 10 125 chr2 16225173 16225269 -237031314 - MER69 DNA AcHobo -13 2513 2429 1754 206 74 0 chr2 16225274 16225641 -237030942 + MLT2D LTR ERVL 1 444 -20 518 187 0 27 chr2 16225641 16225894 -237030689 + CT-rich Low_complexity Low_complexity 1 246 0 234 295 26 0 chr2 16225953 16226031 -237030552 - MER69 DNA AcHobo -97 80 1 1101 217 66 37 chr2 16228417 16228810 -237027773 + MLT1C LTR MaLR 8 467 0 23 0 0 0 chr2 16229124 16229147 -237027436 + AT_rich Low_complexity Low_complexity 1 23 0 2701 200 65 42 chr2 16229755 16230466 -237026117 - LTR8A LTR ERV1 0 727 1 1459 260 46 8 chr2 16230521 16231025 -237025558 + LTR28 LTR ERV1 1 1232 -131 336 284 37 0 chr2 16231629 16231710 -237024873 - MLT1G LTR MaLR -195 395 312 202 299 58 35 chr2 16232496 16232583 -237024000 + L2 LINE L2 2976 3064 -208 1261 206 8 4 chr2 16232699 16232952 -237023631 - AluJo SINE Alu -58 254 1 490 282 31 57 chr2 16233367 16233594 -237022989 - L2 LINE L2 -865 2449 2229 481 280 150 5 chr2 16233656 16233849 -237022734 + MLT1J LTR MaLR 89 309 -202 1945 224 35 23 chr2 16233857 16234374 -237022209 - MER39 LTR ERV1 0 707 5 2577 108 14 11 chr2 16234499 16234869 -237021714 - THE1C LTR MaLR -4 371 1 35 24 0 0 chr2 16234883 16234925 -237021658 + AT_rich Low_complexity Low_complexity 1 42 0 3335 191 25 47 chr2 16234928 16235752 -237020831 - L1MD2 LINE L1 -384 5975 5176 1734 150 38 0 chr2 16235752 16236045 -237020538 - AluSx SINE Alu -8 304 1 3335 191 25 47 chr2 16236045 16236128 -237020455 - L1MD2 LINE L1 -1183 5176 5093 289 301 157 30 chr2 16236512 16236678 -237019905 - L2 LINE L2 -6 3307 3121 423 232 27 72 chr2 16236792 16236958 -237019625 + MER45A DNA AcHobo 1 145 -33 1878 191 3 11 chr2 16237364 16237715 -237018868 + MER7A DNA MER2_type 1 346 0 252 282 0 51 chr2 16237744 16237822 -237018761 - MIR SINE MIR -118 144 71 300 250 133 8 chr2 16238599 16238727 -237017856 - MIR SINE MIR -100 162 19 281 302 23 12 chr2 16239707 16239793 -237016790 - MIR SINE MIR -118 144 58 231 321 131 0 chr2 16239804 16239888 -237016695 + MIR3 SINE MIR 62 156 -52 320 348 62 0 chr2 16240045 16240157 -237016426 - L2 LINE L2 -18 3254 3136 2143 92 24 0 chr2 16240175 16240470 -237016113 + AluSq SINE Alu 1 302 -11 1436 154 91 18 chr2 16240483 16240769 -237015814 + AluJo SINE Alu 4 310 -2 240 226 118 43 chr2 16240829 16240922 -237015661 + MIR SINE MIR 76 175 -87 601 240 34 28 chr2 16241207 16241386 -237015197 + MIR SINE MIR 13 192 -70 221 234 21 0 chr2 16241514 16241561 -237015022 + C-rich Low_complexity Low_complexity 2 49 0 563 219 35 0 chr2 16241721 16241835 -237014748 + MIR SINE MIR 75 192 -70 1968 117 0 59 chr2 16242203 16242527 -237014056 + AluSg SINE Alu 1 305 -5 255 264 68 96 chr2 16242549 16242642 -237013941 - MIR SINE MIR 0 262 168 1752 166 0 31 chr2 16242642 16242822 -237013761 - AluJo SINE Alu -2 310 143 2370 65 0 7 chr2 16242822 16243131 -237013452 - AluY SINE Alu -4 307 1 1752 166 0 31 chr2 16243131 16243270 -237013313 - AluJo SINE Alu -169 143 1 255 264 68 96 chr2 16243270 16243426 -237013157 - MIR SINE MIR -94 168 20 436 315 72 52 chr2 16244612 16244917 -237011666 + L2 LINE L2 2920 3230 -42 547 211 163 15 chr2 16244941 16245229 -237011354 - MLT1J2 LTR MaLR -22 424 71 222 260 0 0 chr2 16245267 16245317 -237011266 + L3 LINE CR1 1346 1395 -182 215 296 102 87 chr2 16246515 16246703 -237009880 - L2 LINE L2 0 3272 3082 285 306 33 16 chr2 16246703 16246824 -237009759 + MIR3 SINE MIR 3 125 -83 374 196 118 10 chr2 16246973 16247075 -237009508 - MIR3 SINE MIR -31 177 65 370 251 48 78 chr2 16248055 16248144 -237008439 - MER112 DNA MER1_type -7 253 170 2014 136 0 0 chr2 16248144 16248452 -237008131 + AluSx SINE Alu 1 308 -4 370 251 48 78 chr2 16248452 16248529 -237008054 - MER112 DNA MER1_type -90 170 92 263 313 61 9 chr2 16248675 16248790 -237007793 + MIR SINE MIR 89 209 -53 482 284 0 0 chr2 16249881 16249997 -237006586 - MIR SINE MIR -10 252 137 544 219 19 45 chr2 16250029 16250184 -237006399 + MER63 DNA MER1_type 1 777 -59 337 322 41 33 chr2 16250217 16250338 -237006245 - MIR SINE MIR -84 124 3 351 65 0 0 chr2 16250451 16250497 -237006086 + (CACCC)n Simple_repeat Simple_repeat 2 47 0 190 359 57 19 chr2 16251026 16251132 -237005451 - L2 LINE L2 0 3272 3163 * 250 365 112 17 chr2 16251131 16251309 -237005274 + L2 LINE L2 2865 3059 -213 284 301 26 35 chr2 16251763 16251876 -237004707 - MIR3 SINE MIR -9 199 88 363 244 0 106 chr2 16252182 16252305 -237004278 - MER94 DNA DNA -5 129 20 25793 24 0 7 chr2 16252372 16256198 -237000385 - L1PA3 LINE L1 0 6155 2351 12800 46 79 5 chr2 16256198 16257830 -236998753 - L1P LINE L1 -4389 1757 1 1994 128 0 16 chr2 16258841 16259146 -236997437 + AluJb SINE Alu 13 312 0 735 154 0 0 chr2 16259317 16259453 -236997130 + (TCCA)n Simple_repeat Simple_repeat 2 137 0 291 267 95 26 chr2 16259453 16259569 -236997014 - L2 LINE L2 0 3272 3149 1801 163 3 0 chr2 16259831 16260125 -236996458 - AluJb SINE Alu -17 295 1 359 246 52 52 chr2 16260125 16260259 -236996324 + MIR SINE MIR 91 224 -38 211 288 45 0 chr2 16260267 16260333 -236996250 - L2 LINE L2 0 3272 3204 417 271 111 60 chr2 16260477 16260676 -236995907 - MIR SINE MIR -3 259 51 399 214 201 17 chr2 16261063 16261196 -236995387 - FLAM_A SINE Alu -5 128 3 438 20 0 0 chr2 16261770 16261821 -236994762 + (CAG)n Simple_repeat Simple_repeat 1 51 0 228 163 0 0 chr2 16261821 16261864 -236994719 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 397 238 75 159 chr2 16261957 16262171 -236994412 + MER91A DNA MER1_type 1 196 0 2102 224 8 3 chr2 16262549 16262941 -236993642 - MER70A LTR ERVL 0 472 79 1163 166 9 18 chr2 16262943 16263160 -236993423 - AluJo SINE Alu -14 298 84 422 299 11 48 chr2 16263232 16263419 -236993164 - L2 LINE L2 -3 3310 3131 189 255 78 0 chr2 16264360 16264411 -236992172 - L2 LINE L2 -1 3271 3217 180 301 63 77 chr2 16264515 16264658 -236991925 - L2 LINE L2 -161 3111 2971 232 217 29 58 chr2 16265165 16265234 -236991349 + MIR3 SINE MIR 119 185 -23 230 294 59 25 chr2 16265418 16265537 -236991046 - MIR SINE MIR -68 140 18 211 343 110 23 chr2 16267218 16267437 -236989146 - MIR SINE MIR -16 246 9 225 333 30 20 chr2 16267920 16268019 -236988564 - MIR SINE MIR -22 240 141 2453 198 11 19 chr2 16268389 16268863 -236987720 + MER82 DNA MER2_type 1 470 -183 853 143 0 7 chr2 16268867 16269007 -236987576 + FLAM_C SINE Alu 1 139 -4 565 311 67 0 chr2 16269009 16269189 -236987394 + MER82 DNA MER2_type 447 638 -15 234 0 0 0 chr2 16270316 16270342 -236986241 + (T)n Simple_repeat Simple_repeat 1 26 0 246 295 86 19 chr2 16270787 16270892 -236985691 + MIR SINE MIR 24 135 -73 258 284 27 0 chr2 16272156 16272230 -236984353 - MIR3 SINE MIR -21 187 112 283 287 47 33 chr2 16272578 16272728 -236983855 + MIR3 SINE MIR 20 171 -37 1014 254 35 19 chr2 16273544 16273800 -236982783 - MIR SINE MIR 0 262 3 346 302 149 27 chr2 16275042 16275264 -236981319 - MIR SINE MIR 0 262 14 383 294 118 18 chr2 16276189 16276359 -236980224 + MIR SINE MIR 72 258 -4 4202 160 24 21 chr2 16276399 16277119 -236979464 + MER72 LTR ERV1 1 722 0 2816 242 15 23 chr2 16277281 16277725 -236978858 + MER82 DNA MER2_type 5 444 -209 9310 112 6 0 chr2 16277725 16279004 -236977579 + HSMAR1 DNA Mariner 1 1287 0 2816 242 15 23 chr2 16279004 16279213 -236977370 + MER82 DNA MER2_type 444 653 0 187 350 92 6 chr2 16279275 16279438 -236977145 - L2 LINE L2 -1903 1411 1235 189 0 0 0 chr2 16279651 16279672 -236976911 + (A)n Simple_repeat Simple_repeat 1 21 0 497 276 147 0 chr2 16280053 16280209 -236976374 + MER5A DNA MER1_type 10 188 -1 974 239 96 96 chr2 16281046 16281365 -236975218 - L1ME4a LINE L1 -12 6109 5792 185 222 0 67 chr2 16281365 16281410 -236975173 + L2 LINE L2 3266 3307 -6 974 239 96 96 chr2 16281410 16281982 -236974601 - L1ME4a LINE L1 -329 5792 5170 2018 157 0 0 chr2 16283754 16284059 -236972524 + AluSx SINE Alu 1 305 -7 312 256 65 53 chr2 16286466 16286738 -236969845 - L1ME LINE L1 -551 5570 5297 388 299 46 31 chr2 16287116 16287310 -236969273 + MER117 DNA MER1_type 1 197 0 261 271 139 33 chr2 16287332 16287454 -236969129 - MIR3 SINE MIR -52 156 22 218 180 20 20 chr2 16287940 16287990 -236968593 + (TTAA)n Simple_repeat Simple_repeat 2 51 0 288 327 71 9 chr2 16288224 16288337 -236968246 - L2 LINE L2 -13 3259 3140 2295 115 0 3 chr2 16288358 16288672 -236967911 + AluSq SINE Alu 1 313 0 461 113 0 0 chr2 16288707 16288769 -236967814 - L1PA16 LINE L1 -95 6071 6010 394 116 130 0 chr2 16288769 16288834 -236967749 + L1PA16 LINE L1 6078 6155 -11 1783 174 3 3 chr2 16288896 16289189 -236967394 - AluJb SINE Alu -16 296 4 326 180 16 0 chr2 16289229 16289290 -236967293 - MER2 DNA MER2_type -16 329 268 1146 168 14 5 chr2 16289317 16289526 -236967057 - MER2 DNA MER2_type -134 211 1 546 236 93 33 chr2 16290256 16290438 -236966145 + MIR SINE MIR 68 260 -2 262 309 21 10 chr2 16290524 16290621 -236965962 + MIR3 SINE MIR 99 196 -12 4012 190 62 23 chr2 16290842 16291662 -236964921 + MER21B LTR ERV1 1 852 -11 38 51 0 0 chr2 16292125 16292184 -236964399 + AT_rich Low_complexity Low_complexity 1 59 0 284 264 118 56 chr2 16292201 16292345 -236964238 - MIR SINE MIR -18 244 92 250 271 17 0 chr2 16293019 16293078 -236963505 + C-rich Low_complexity Low_complexity 1 60 0 224 325 174 58 chr2 16293078 16293491 -236963092 - L2 LINE L2 -5 3267 2807 327 318 82 15 chr2 16294187 16294382 -236962201 - MIR SINE MIR -26 236 29 186 296 19 19 chr2 16294445 16294499 -236962084 + MIR SINE MIR 17 70 -192 186 289 72 41 chr2 16294529 16294626 -236961957 + MIR SINE MIR 163 262 0 417 247 112 18 chr2 16295247 16295417 -236961166 - MIR SINE MIR -71 191 6 1847 180 7 0 chr2 16295959 16296259 -236960324 - AluJb SINE Alu -10 302 1 387 0 0 0 chr2 16296262 16296305 -236960278 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 2152 91 4 4 chr2 16296309 16296585 -236959998 - AluSx SINE Alu -24 288 13 859 243 0 20 chr2 16296654 16296856 -236959727 + MER3 DNA MER1_type 12 209 0 26 30 0 0 chr2 16297857 16297890 -236958693 + AT_rich Low_complexity Low_complexity 1 33 0 1128 206 0 0 chr2 16298431 16298620 -236957963 + MER5A DNA MER1_type 1 189 0 2171 121 7 0 chr2 16298655 16298952 -236957631 + AluSx SINE Alu 1 299 -13 215 355 125 34 chr2 16298958 16299279 -236957304 - L2 LINE L2 -568 2746 2397 2220 117 10 0 chr2 16299790 16300097 -236956486 - AluSx SINE Alu -2 310 1 362 280 17 42 chr2 16300097 16300204 -236956379 - MIR3 SINE MIR -10 198 93 543 323 12 36 chr2 16300320 16300571 -236956012 - MIR SINE MIR -17 245 1 345 306 127 52 chr2 16300699 16300872 -236955711 + L2 LINE L2 3077 3262 -10 2333 107 7 0 chr2 16300892 16301202 -236955381 + AluSx SINE Alu 1 312 0 206 260 87 58 chr2 16301234 16301338 -236955245 + L2 LINE L2 3166 3272 0 342 134 0 97 chr2 16301345 16301415 -236955168 + AluS SINE Alu 2 57 -246 302 350 71 7 chr2 16301885 16302025 -236954558 - MIR SINE MIR -94 168 20 426 287 116 12 chr2 16303215 16303379 -236953204 - MIR SINE MIR -19 243 63 2298 74 0 23 chr2 16303387 16303720 -236952863 - AluSg SINE Alu 0 310 1 359 299 28 9 chr2 16304023 16304130 -236952453 + MIR3 SINE MIR 82 190 -18 2085 115 24 3 chr2 16306460 16306748 -236949835 - AluSq SINE Alu -17 296 3 187 31 62 0 chr2 16306955 16306987 -236949596 + T-rich Low_complexity Low_complexity 2 35 0 568 210 153 45 chr2 16307091 16307248 -236949335 + MER5A DNA MER1_type 16 189 0 269 290 84 30 chr2 16307834 16307965 -236948618 - MIR SINE MIR 0 262 125 183 167 24 24 chr2 16308903 16308945 -236947638 - L2 LINE L2 -5 3308 3267 945 230 140 4 chr2 16309166 16309431 -236947152 + MLT1D LTR MaLR 205 505 0 258 288 131 25 chr2 16309692 16309852 -236946731 - L2 LINE L2 -173 3099 2923 203 380 44 32 chr2 16309917 16310075 -236946508 - L2 LINE L2 -498 2816 2657 248 397 47 34 chr2 16310332 16310629 -236945954 + L3 LINE CR1 49 349 -1228 210 37 0 0 chr2 16311460 16311487 -236945096 + (CA)n Simple_repeat Simple_repeat 1 27 0 3111 199 98 32 chr2 16312555 16312697 -236943886 - MER21B LTR ERV1 -2 861 730 204 40 0 0 chr2 16312697 16312722 -236943861 + (CAATT)n Simple_repeat Simple_repeat 2 26 0 3111 199 98 32 chr2 16312722 16313304 -236943279 - MER21B LTR ERV1 -133 730 89 346 405 16 5 chr2 16314699 16314884 -236941699 + MIR SINE MIR 24 210 -52 198 271 106 24 chr2 16314854 16314939 -236941644 + L2 LINE L2 2766 2857 -457 * 194 98 78 20 chr2 16315144 16315246 -236941337 + (TA)n Simple_repeat Simple_repeat 2 109 0 477 34 0 0 chr2 16315627 16315686 -236940897 + (CA)n Simple_repeat Simple_repeat 2 60 0 3625 191 12 21 chr2 16317366 16317566 -236939017 - L1MC2 LINE L1 -2 7764 7564 2378 85 0 0 chr2 16317566 16317860 -236938723 - AluSg SINE Alu -16 294 1 3625 191 12 21 chr2 16317860 16318405 -236938178 - L1MC2 LINE L1 -202 7564 6137 241 325 78 95 chr2 16318624 16319036 -236937547 + L2 LINE L2 2825 3229 -43 539 241 69 0 chr2 16319945 16320061 -236936522 + L1ME4a LINE L1 5519 5642 -479 2681 212 100 111 chr2 16320080 16321117 -236935466 - L1MC5 LINE L1 -33 7928 6883 1962 163 165 11 chr2 16321117 16321553 -236935030 + MLT1D LTR MaLR 3 505 0 2681 212 100 111 chr2 16321553 16321982 -236934601 - L1MC5 LINE L1 -1078 6883 6451 285 98 0 0 chr2 16321988 16322029 -236934554 + (TA)n Simple_repeat Simple_repeat 2 42 0 260 184 0 0 chr2 16322103 16322181 -236934402 - Alu SINE Alu 0 323 246 796 304 73 72 chr2 16322205 16322903 -236933680 - L1M4 LINE L1 -1723 4423 3722 893 200 65 0 chr2 16322903 16323058 -236933525 - FAM SINE Alu -10 165 1 796 304 73 72 chr2 16323058 16323457 -236933126 - L1M4 LINE L1 -2424 3722 3325 284 289 167 4 chr2 16323603 16323842 -236932741 + L1ME4a LINE L1 5733 6010 -111 264 269 0 15 chr2 16324078 16324145 -236932438 + CT-rich Low_complexity Low_complexity 4 69 0 199 266 239 18 chr2 16324220 16324329 -236932254 - L2 LINE L2 -1 3312 3180 689 214 65 13 chr2 16324364 16324518 -236932065 + MER5A DNA MER1_type 2 163 -26 1488 228 21 9 chr2 16324535 16324860 -236931723 - MER58B DNA MER1_type -1 340 12 681 246 146 80 chr2 16324872 16325298 -236931285 - L3 LINE CR1 -174 1403 950 653 322 118 42 chr2 16325477 16326719 -236929864 + L2 LINE L2 1973 3313 0 228 305 195 0 chr2 16326745 16326827 -236929756 + L2 LINE L2 3159 3256 -16 249 274 14 0 chr2 16326844 16326917 -236929666 + (TGAA)n Simple_repeat Simple_repeat 3 76 0 185 252 46 130 chr2 16327448 16327579 -236929004 - L2 LINE L2 -13 3300 3181 186 133 0 0 chr2 16328473 16328503 -236928080 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 266 343 34 46 chr2 16329481 16329656 -236926927 - MIR SINE MIR -55 207 35 2290 99 0 13 chr2 16329907 16330220 -236926363 + AluY SINE Alu 1 309 -2 3891 188 21 6 chr2 16330315 16331032 -236925551 - L1MB2 LINE L1 -1 6170 5443 3362 241 74 44 chr2 16331394 16332561 -236924022 + L1ME1 LINE L1 3974 5228 -938 2099 132 3 28 chr2 16332561 16332879 -236923704 - AluSx SINE Alu -2 310 1 3362 241 74 44 chr2 16332879 16333842 -236922741 + L1ME1 LINE L1 5228 6161 -5 213 320 90 62 chr2 16334078 16334256 -236922327 + MIR3 SINE MIR 9 191 -17 22 0 0 0 chr2 16334284 16334306 -236922277 + AT_rich Low_complexity Low_complexity 1 22 0 1677 283 111 33 chr2 16335328 16335898 -236920685 - L2 LINE L2 -3 3310 2786 1162 234 167 34 chr2 16335898 16336342 -236920241 - MLT1D LTR MaLR -2 503 1 1677 283 111 33 chr2 16336342 16336924 -236919659 - L2 LINE L2 -527 2786 2057 847 197 80 5 chr2 16338166 16338354 -236918229 - MER20 DNA MER1_type -17 202 1 449 289 24 6 chr2 16338362 16338528 -236918055 + MER5A DNA MER1_type 1 169 -20 343 245 10 29 chr2 16338563 16338665 -236917918 + MER5B DNA MER1_type 18 117 -61 343 162 162 66 chr2 16339655 16339791 -236916792 + LTR50 LTR ERVL 1 149 -646 427 263 149 69 chr2 16339917 16340293 -236916290 + LTR33A LTR ERVL 292 523 0 257 354 71 9 chr2 16340308 16340520 -236916063 - L2 LINE L2 -222 3050 2826 250 330 10 0 chr2 16340684 16340781 -236915802 - L2 LINE L2 -572 2742 2645 200 274 110 0 chr2 16340851 16340924 -236915659 + MIR3 SINE MIR 78 158 -50 2134 97 10 35 chr2 16342606 16342897 -236913686 + AluSq SINE Alu 1 285 -28 180 97 0 0 chr2 16342897 16342928 -236913655 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 2134 97 10 35 chr2 16342928 16342946 -236913637 + AluSq SINE Alu 285 302 -11 300 221 44 15 chr2 16343874 16343942 -236912641 + MIR SINE MIR 84 153 -109 506 316 5 38 chr2 16344143 16344352 -236912231 - MIR SINE MIR -59 203 2 208 362 73 59 chr2 16345228 16345401 -236911182 + L2 LINE L2 2539 2708 -606 1485 173 64 0 chr2 16345401 16345680 -236910903 - AluJb SINE Alu 0 314 20 208 362 73 59 chr2 16345680 16345845 -236910738 + L2 LINE L2 2708 2883 -431 209 359 54 0 chr2 16346117 16346209 -236910374 + L2 LINE L2 3208 3304 -9 258 81 0 0 chr2 16346373 16346410 -236910173 + (TG)n Simple_repeat Simple_repeat 1 37 0 183 273 30 0 chr2 16348220 16348286 -236908297 - MIR3 SINE MIR -41 167 100 198 170 21 21 chr2 16349909 16349956 -236906627 + MIR SINE MIR 86 132 -130 207 0 0 0 chr2 16350010 16350033 -236906550 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2241 108 0 0 chr2 16350044 16350331 -236906252 - AluSx SINE Alu -25 287 1 283 256 85 0 chr2 16350708 16350858 -236905725 + MIR SINE MIR 30 194 -58 1394 107 56 5 chr2 16350998 16351214 -236905369 + MER30 DNA MER1_type 1 227 -3 334 299 8 0 chr2 16353034 16353151 -236903432 - MIR SINE MIR -58 150 33 265 266 6 6 chr2 16354497 16354674 -236901909 + (CATA)n Simple_repeat Simple_repeat 2 178 0 422 286 0 20 chr2 16354676 16354823 -236901760 + (CA)n Simple_repeat Simple_repeat 1 144 0 375 247 0 0 chr2 16354841 16354999 -236901584 + (CA)n Simple_repeat Simple_repeat 1 158 0 22 0 0 0 chr2 16355915 16355937 -236900646 + AT_rich Low_complexity Low_complexity 1 22 0 2481 44 40 0 chr2 16356277 16356575 -236900008 - AluY SINE Alu -1 310 1 814 288 107 36 chr2 16357015 16357428 -236899155 + LTR16A LTR ERVL 4 445 -5 215 59 0 29 chr2 16357862 16357896 -236898687 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 254 289 191 29 chr2 16358783 16358956 -236897627 - MIR3 SINE MIR -3 205 5 3496 126 55 17 chr2 16359596 16360175 -236896408 + MER7C DNA MER2_type 2 602 0 10525 186 39 4 chr2 16360206 16362808 -236893775 + L1MA4A LINE L1 923 3615 -3233 8983 128 6 0 chr2 16362814 16364089 -236892494 + HSMAR1 DNA Mariner 1 1282 -5 10777 172 46 9 chr2 16364094 16364957 -236891626 + L1MA4A LINE L1 3622 4452 -2553 213 39 0 0 chr2 16364957 16364983 -236891600 + (TA)n Simple_repeat Simple_repeat 2 27 0 10777 172 46 9 chr2 16364983 16367384 -236889199 + L1MA4A LINE L1 4452 6997 -8 22 35 0 0 chr2 16367385 16367414 -236889169 + AT_rich Low_complexity Low_complexity 1 29 0 2046 117 10 10 chr2 16367502 16367800 -236888783 + AluSc SINE Alu 3 300 -9 1639 256 157 39 chr2 16368000 16368763 -236887820 - HAL1 LINE L1 -1653 854 2 3210 185 24 26 chr2 16370145 16370565 -236886018 + L1MB3 LINE L1 5497 5917 -266 2139 141 0 0 chr2 16370565 16370869 -236885714 - AluSx SINE Alu -7 305 2 3210 185 24 26 chr2 16370869 16371103 -236885480 + L1MB3 LINE L1 5917 6150 -33 1408 164 13 4 chr2 16371103 16371362 -236885221 + AluJb SINE Alu 50 310 0 272 71 0 0 chr2 16371362 16371404 -236885179 + L1MB4 LINE L1 6139 6180 0 788 191 62 11 chr2 16372122 16372300 -236884283 - MER5A DNA MER1_type 0 189 3 1460 144 104 15 chr2 16372571 16372841 -236883742 + MSTA LTR MaLR 2 295 -133 9530 148 14 22 chr2 16372876 16373378 -236883205 + MSTA-int LTR MaLR 5 510 -1070 207 0 0 0 chr2 16373378 16373401 -236883182 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9530 148 14 22 chr2 16373401 16374481 -236882102 + MSTA-int LTR MaLR 510 1574 -6 1558 180 196 14 chr2 16374487 16374849 -236881734 + MSTA LTR MaLR 1 428 0 2517 87 0 0 chr2 16375524 16375833 -236880750 - AluY SINE Alu -2 309 1 495 311 39 14 chr2 16376064 16376352 -236880231 - L1ME3A LINE L1 -154 5967 5678 443 274 100 66 chr2 16376392 16376943 -236879640 - L1 LINE L1 -1273 4873 4343 2336 103 0 6 chr2 16376943 16377254 -236879329 - AluSq SINE Alu -3 310 2 443 274 100 66 chr2 16377254 16377594 -236878989 - L1 LINE L1 -1803 4343 3943 2261 114 0 0 chr2 16377594 16377900 -236878683 + AluSg SINE Alu 1 306 -4 443 274 100 66 chr2 16377900 16377928 -236878655 - L1 LINE L1 -2203 3943 3917 602 268 150 38 chr2 16377943 16378778 -236877805 - L1 LINE L1 -2479 3667 2740 1901 166 0 22 chr2 16378817 16379130 -236877453 - AluJo SINE Alu -2 310 5 369 298 70 0 chr2 16379439 16379597 -236876986 - L1 LINE L1 -3537 2609 2441 2167 113 0 0 chr2 16379828 16380135 -236876448 - AluSx SINE Alu 0 307 1 21 57 0 0 chr2 16380224 16380259 -236876324 + AT_rich Low_complexity Low_complexity 1 35 0 889 105 0 15 chr2 16380331 16380464 -236876119 + L1PB1 LINE L1 6020 6150 -1 273 86 52 0 chr2 16380471 16380529 -236876054 + (TA)n Simple_repeat Simple_repeat 2 62 0 394 318 78 31 chr2 16380735 16380949 -236875634 - HAL1 LINE L1 -833 1674 1432 2016 88 3 88 chr2 16380949 16381311 -236875272 + AluY SINE Alu 1 336 0 394 318 78 31 chr2 16381311 16381482 -236875101 - HAL1 LINE L1 -1075 1432 1270 186 43 0 0 chr2 16381516 16381539 -236875044 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2162 107 7 0 chr2 16381541 16381821 -236874762 - AluSp SINE Alu -31 282 1 339 343 28 28 chr2 16382470 16382613 -236873970 + MIR3 SINE MIR 44 186 -22 627 254 50 28 chr2 16383866 16384077 -236872506 - MER20B DNA MER1_type 0 219 1 272 275 61 84 chr2 16384349 16384480 -236872103 + L2 LINE L2 3145 3272 0 275 209 275 0 chr2 16384749 16384840 -236871743 - MER96 DNA MER1_type? -9 166 51 394 297 78 8 chr2 16384885 16385013 -236871570 - MIR SINE MIR -110 152 16 333 267 20 0 chr2 16385024 16385125 -236871458 + MER5C DNA MER1_type 26 128 -196 185 205 103 26 chr2 16385178 16385256 -236871327 + MER5C DNA MER1_type 241 324 0 22 56 0 0 chr2 16385374 16385410 -236871173 + AT_rich Low_complexity Low_complexity 1 36 0 262 191 118 88 chr2 16385632 16385768 -236870815 - L1ME LINE L1 -291 5879 5740 393 224 31 10 chr2 16385772 16385870 -236870713 + LTR41 LTR ERVL 2 101 -672 958 223 125 105 chr2 16386023 16386432 -236870151 + LTR41 LTR ERVL 351 767 -6 500 287 121 24 chr2 16386441 16387294 -236869289 - L1ME LINE L1 -425 5739 4802 617 297 94 5 chr2 16387380 16387592 -236868991 - MIR SINE MIR -31 231 1 522 304 130 4 chr2 16387888 16388111 -236868472 + MIR SINE MIR 2 249 -13 697 264 24 6 chr2 16388810 16388977 -236867606 - MIR SINE MIR -8 254 85 377 274 11 0 chr2 16391248 16391343 -236865240 + MER94 DNA DNA 39 134 0 26 88 0 0 chr2 16391643 16391711 -236864872 + AT_rich Low_complexity Low_complexity 1 68 0 383 293 0 32 chr2 16391865 16392009 -236864574 - L1M4 LINE L1 -1091 5055 4916 757 277 106 43 chr2 16392250 16392976 -236863607 - L1M4 LINE L1 -1404 4742 3971 1559 181 20 3 chr2 16393037 16393335 -236863248 - L1MA4 LINE L1 -20 6280 5978 230 204 20 0 chr2 16393478 16393527 -236863056 + (TATG)n Simple_repeat Simple_repeat 2 51 0 3891 226 167 37 chr2 16393641 16395001 -236861582 - L1MD3 LINE L1 0 7995 6459 1977 139 7 3 chr2 16395154 16395442 -236861141 - AluJb SINE Alu -23 289 1 418 294 14 28 chr2 16396070 16396213 -236860370 + CT-rich Low_complexity Low_complexity 4 144 0 492 297 73 10 chr2 16396216 16396408 -236860175 + MIR SINE MIR 47 250 -12 1825 193 20 50 chr2 16397242 16397642 -236858941 - MLT1B LTR MaLR 0 390 3 246 293 233 13 chr2 16398881 16399031 -236857552 + MIR SINE MIR 15 197 -65 334 282 9 18 chr2 16399037 16399147 -236857436 + MIR SINE MIR 56 164 -98 228 222 139 83 chr2 16399179 16399287 -236857296 + MIR SINE MIR 149 262 0 1249 196 80 3 chr2 16399658 16399784 -236856799 + MER33 DNA MER1_type 1 116 -2469 1826 171 13 3 chr2 16399784 16400088 -236856495 + AluJo SINE Alu 1 307 -5 1249 196 80 3 chr2 16400088 16400262 -236856321 + MER33 DNA MER1_type 116 324 0 286 270 44 80 chr2 16400510 16400647 -236855936 + L2 LINE L2 2919 3050 -222 2141 132 0 28 chr2 16401224 16401543 -236855040 - AluSx SINE Alu -2 310 1 302 324 48 28 chr2 16402028 16402173 -236854410 + HAL1 LINE L1 1287 1434 -1073 2296 105 0 0 chr2 16402260 16402554 -236854029 - AluSq SINE Alu -17 296 3 361 322 25 89 chr2 16402748 16403233 -236853350 + L1ME LINE L1 5316 5769 -352 32 67 0 0 chr2 16403235 16403295 -236853288 + AT_rich Low_complexity Low_complexity 1 60 0 1646 264 90 40 chr2 16403532 16404480 -236852103 - L2 LINE L2 0 3313 2305 2375 111 18 12 chr2 16404722 16405055 -236851528 - L1PA10 LINE L1 -4 6164 5830 509 257 78 5 chr2 16405055 16405273 -236851310 - L1M4 LINE L1 -2753 3393 3160 242 244 64 26 chr2 16405285 16405363 -236851220 + MIR SINE MIR 170 250 -12 271 197 14 56 chr2 16405846 16405917 -236850666 + MER91 DNA MER1_type 73 140 0 643 266 121 8 chr2 16406195 16406567 -236850016 + L1ME4a LINE L1 5705 6118 -3 227 353 134 10 chr2 16407171 16407372 -236849211 + MIR SINE MIR 14 239 -23 363 331 135 0 chr2 16408040 16408218 -236848365 - MIR SINE MIR -16 246 45 189 74 0 0 chr2 16409093 16409120 -236847463 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 215 263 58 73 chr2 16409122 16409259 -236847324 + MIR3 SINE MIR 10 144 -64 317 299 98 17 chr2 16409783 16409957 -236846626 - MER5A DNA MER1_type -1 188 1 187 238 225 0 chr2 16409985 16410065 -236846518 - MIR3 SINE MIR -8 200 103 1510 193 25 0 chr2 16410447 16410722 -236845861 + AluJo SINE Alu 11 292 -20 2174 107 10 3 chr2 16410724 16411022 -236845561 + AluSq SINE Alu 1 300 -13 228 348 115 20 chr2 16411210 16411515 -236845068 + L2 LINE L2 1615 1948 -1366 201 261 60 82 chr2 16411503 16411637 -236844946 + MIR SINE MIR 120 250 -12 * 363 169 0 0 chr2 16412124 16412195 -236844388 + (TG)n Simple_repeat Simple_repeat 1 71 0 275 258 75 21 chr2 16412590 16412683 -236843900 + MIR SINE MIR 50 147 -61 297 307 86 14 chr2 16412697 16412837 -236843746 - L2 LINE L2 -1 3271 3122 406 303 173 40 chr2 16412858 16413426 -236843157 - L2 LINE L2 -823 2491 1849 816 65 0 0 chr2 16413544 16413651 -236842932 + (TTCC)n Simple_repeat Simple_repeat 1 107 0 4606 88 0 5 chr2 16413651 16414250 -236842333 - L1PB1 LINE L1 -13 6138 5543 244 184 0 26 chr2 16417614 16417690 -236838893 + (CA)n Simple_repeat Simple_repeat 2 75 0 441 136 36 28 chr2 16418117 16418376 -236838207 + (CA)n Simple_repeat Simple_repeat 1 261 0 264 115 80 0 chr2 16418440 16418553 -236838030 + (CA)n Simple_repeat Simple_repeat 2 123 0 328 114 57 40 chr2 16418588 16418764 -236837819 + (CA)n Simple_repeat Simple_repeat 2 180 0 504 102 73 0 chr2 16418828 16419081 -236837502 + (CA)n Simple_repeat Simple_repeat 1 271 0 282 124 74 0 chr2 16419097 16419218 -236837365 + (CA)n Simple_repeat Simple_repeat 2 131 0 246 214 51 10 chr2 16419230 16419328 -236837255 + (CA)n Simple_repeat Simple_repeat 1 102 0 248 0 31 0 chr2 16419394 16419426 -236837157 + (CA)n Simple_repeat Simple_repeat 2 34 0 454 230 24 24 chr2 16419660 16419825 -236836758 + (CA)n Simple_repeat Simple_repeat 1 165 0 319 231 57 46 chr2 16420190 16420299 -236836284 + MIR SINE MIR 42 150 -62 22 0 0 0 chr2 16420376 16420398 -236836185 + AT_rich Low_complexity Low_complexity 1 22 0 212 245 0 0 chr2 16420538 16420587 -236835996 + T-rich Low_complexity Low_complexity 1 49 0 288 267 0 13 chr2 16421216 16421291 -236835292 + L2 LINE L2 3198 3271 -1 2272 113 3 0 chr2 16423236 16423545 -236833038 + AluSg SINE Alu 1 310 0 221 208 52 31 chr2 16424002 16424098 -236832485 - L3b LINE CR1 -207 1376 1279 339 217 22 28 chr2 16424552 16424732 -236831851 + (TA)n Simple_repeat Simple_repeat 2 180 0 333 274 219 0 chr2 16424787 16424951 -236831632 - MIR SINE MIR -56 206 7 1368 77 0 0 chr2 16425078 16425248 -236831335 + AluY SINE Alu 130 299 -12 301 226 147 10 chr2 16425378 16425480 -236831103 - L2 LINE L2 -2 3311 3196 379 229 42 2 chr2 16426120 16426235 -236830348 - MIR SINE MIR -62 146 37 237 286 0 0 chr2 16426629 16426692 -236829891 + (TCCA)n Simple_repeat Simple_repeat 4 66 0 247 361 57 25 chr2 16426698 16426856 -236829727 - L2 LINE L2 0 3272 3110 204 313 109 47 chr2 16427667 16428056 -236828527 - L2 LINE L2 -238 3034 2606 266 301 124 9 chr2 16429113 16429226 -236827357 - MIR3 SINE MIR -41 167 42 2061 144 102 3 chr2 16429336 16429689 -236826894 - MLT1B LTR MaLR -2 388 1 300 287 70 38 chr2 16429823 16429980 -236826603 - MIR SINE MIR -49 213 52 203 147 29 0 chr2 16431646 16431680 -236824903 + L2 LINE L2 3255 3289 -24 352 268 130 7 chr2 16431832 16431970 -236824613 + MIR SINE MIR 104 258 -4 231 359 35 47 chr2 16433831 16434001 -236822582 - MIR SINE MIR -70 192 25 210 220 0 0 chr2 16434086 16434145 -236822438 + (CAT)n Simple_repeat Simple_repeat 1 59 0 867 183 0 0 chr2 16434194 16434374 -236822209 + (CAT)n Simple_repeat Simple_repeat 1 180 0 559 71 24 0 chr2 16434888 16434972 -236821611 - L1PB2 LINE L1 -3 6148 6063 857 244 62 0 chr2 16435126 16435335 -236821248 + MER58A DNA MER1_type 3 224 0 2853 253 107 75 chr2 16435341 16435999 -236820584 + L2 LINE L2 1486 2122 -1191 915 203 184 44 chr2 16435999 16436319 -236820264 - MLT1A1 LTR MaLR 0 365 1 2853 253 107 75 chr2 16436319 16437436 -236819147 + L2 LINE L2 2122 3313 0 302 352 49 6 chr2 16437951 16438113 -236818470 + MIR SINE MIR 23 191 -71 180 278 151 48 chr2 16438526 16438652 -236817931 - MIR3 SINE MIR -68 140 2 2367 85 7 3 chr2 16438711 16439018 -236817565 + AluSq SINE Alu 1 308 -5 820 174 29 17 chr2 16439063 16439235 -236817348 + MLT1A1 LTR MaLR 3 176 -189 2854 178 11 15 chr2 16439455 16439990 -236816593 - L1MA6 LINE L1 -6 6294 5762 387 225 83 138 chr2 16439995 16440163 -236816420 - L2 LINE L2 -7 3306 3163 1926 148 7 0 chr2 16440163 16440447 -236816136 + AluSx SINE Alu 1 286 -26 387 225 83 138 chr2 16440447 16440603 -236815980 - L2 LINE L2 -150 3163 3000 21 36 0 0 chr2 16440603 16440631 -236815952 + AT_rich Low_complexity Low_complexity 1 28 0 253 331 41 8 chr2 16440749 16440870 -236815713 - L3 LINE CR1 -142 1435 1311 806 262 99 60 chr2 16440870 16441252 -236815331 + MLT1J2 LTR MaLR 1 397 -53 223 241 17 17 chr2 16441568 16441626 -236814957 + L2 LINE L2 3215 3272 0 2586 44 0 19 chr2 16443446 16443763 -236812820 - AluY SINE Alu 0 311 1 185 116 43 101 chr2 16443816 16443885 -236812698 - L2 LINE L2 -95 3218 3154 432 323 80 67 chr2 16444233 16444863 -236811720 - L2 LINE L2 -39 3233 2542 480 321 96 65 chr2 16444863 16445627 -236810956 + L1M4 LINE L1 4134 4920 -1226 194 308 93 9 chr2 16447284 16447391 -236809192 - MIR SINE MIR -13 249 134 579 246 153 5 chr2 16448202 16448405 -236808178 - MLT1L LTR MaLR -339 276 44 256 324 0 0 chr2 16448693 16448764 -236807819 - MIR SINE MIR -132 130 60 1618 229 106 1 chr2 16448816 16449277 -236807306 - MLT1F1 LTR MaLR 0 542 1 273 341 64 70 chr2 16452427 16452785 -236803798 - L2 LINE L2 0 3272 2917 400 228 343 14 chr2 16453102 16453321 -236803262 - MER5C DNA MER1_type -2 322 32 256 335 130 31 chr2 16454013 16454241 -236802342 + L2 LINE L2 2077 2281 -1033 2327 195 71 25 chr2 16454241 16454722 -236801861 + MLT1D LTR MaLR 3 505 0 256 335 130 31 chr2 16454722 16454878 -236801705 + L2 LINE L2 2281 2499 -815 183 288 68 14 chr2 16454901 16454974 -236801609 + L2 LINE L2 2764 2840 -474 318 313 102 54 chr2 16455054 16455348 -236801235 + L2 LINE L2 2956 3263 -9 363 245 43 0 chr2 16455585 16455679 -236800904 - MIR SINE MIR 0 262 165 646 252 7 0 chr2 16455769 16455908 -236800675 - MIR SINE MIR -120 142 3 266 323 100 8 chr2 16455976 16456106 -236800477 - L2 LINE L2 0 3313 3172 252 366 29 23 chr2 16456776 16456948 -236799635 + MIR SINE MIR 47 219 -43 223 178 0 0 chr2 16457052 16457097 -236799486 - L2 LINE L2 0 3313 3269 225 269 32 65 chr2 16457647 16457740 -236798843 + MIR SINE MIR 118 207 -55 1548 187 92 38 chr2 16457770 16458139 -236798444 - MLT1B LTR MaLR -1 389 1 1286 265 98 70 chr2 16459829 16460129 -236796454 - HAL1 LINE L1 -21 2486 2196 834 244 60 5 chr2 16460129 16460330 -236796253 + MER58C DNA MER1_type 3 214 -1 1286 265 98 70 chr2 16460330 16460968 -236795615 - HAL1 LINE L1 -311 2196 1522 404 351 176 28 chr2 16461071 16461458 -236795125 - HAL1 LINE L1 -1757 750 307 195 266 153 95 chr2 16461774 16462015 -236794568 - L2 LINE L2 -4 3268 3014 469 299 48 39 chr2 16462260 16462491 -236794092 - MIR SINE MIR -25 237 5 268 310 136 11 chr2 16463590 16463774 -236792809 - MIR SINE MIR -16 246 40 207 0 0 0 chr2 16464535 16464558 -236792025 + (TA)n Simple_repeat Simple_repeat 1 23 0 2103 123 0 13 chr2 16464559 16464867 -236791716 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr2 16464994 16465018 -236791565 + AT_rich Low_complexity Low_complexity 1 24 0 399 294 94 71 chr2 16465815 16466155 -236790428 + L2 LINE L2 2907 3254 -18 255 323 10 0 chr2 16466340 16466439 -236790144 - MER117 DNA MER1_type -96 101 2 323 265 7 143 chr2 16467264 16467411 -236789172 - MER91C DNA MER1_type -13 127 1 27 62 0 0 chr2 16467626 16467674 -236788909 + AT_rich Low_complexity Low_complexity 1 48 0 1179 242 5 96 chr2 16467759 16468156 -236788427 - MLT1A2 LTR MaLR -13 361 1 506 288 50 3 chr2 16468203 16468407 -236788176 + MLT1F1 LTR MaLR 7 285 -282 354 259 83 102 chr2 16468697 16469010 -236787573 + MLT1F-int LTR MaLR 1028 1334 -37 1842 248 100 22 chr2 16469025 16469525 -236787058 + MLT1F LTR MaLR 4 542 0 304 305 49 37 chr2 16469608 16469772 -236786811 + MIR3 SINE MIR 24 189 -19 454 234 27 98 chr2 16470049 16470186 -236786397 + MIR SINE MIR 42 164 -98 1725 155 67 67 chr2 16470186 16470518 -236786065 + THE1C LTR MaLR 1 335 -40 2236 125 3 0 chr2 16470518 16470822 -236785761 - AluSq SINE Alu -8 305 1 1725 155 67 67 chr2 16470822 16470864 -236785719 + THE1C LTR MaLR 334 375 0 454 234 27 98 chr2 16470864 16470910 -236785673 + MIR SINE MIR 164 212 -50 203 286 92 107 chr2 16471373 16471579 -236785004 + L2 LINE L2 2994 3196 -76 2847 10 0 0 chr2 16471613 16471920 -236784663 - AluYa5 SINE Alu -4 307 1 222 191 0 0 chr2 16471954 16472001 -236784582 + GA-rich Low_complexity Low_complexity 2 48 0 263 272 136 0 chr2 16472116 16472197 -236784386 - MIR SINE MIR -105 157 66 2950 41 0 9 chr2 16472719 16473061 -236783522 - L1PA5 LINE L1 -2 6152 5814 355 333 41 10 chr2 16473087 16473282 -236783301 + L2 LINE L2 2148 2348 -966 185 318 71 12 chr2 16473441 16473526 -236783057 - MIR SINE MIR -79 129 40 208 235 0 0 chr2 16473781 16473832 -236782751 + (CAA)n Simple_repeat Simple_repeat 1 51 0 243 0 0 0 chr2 16474572 16474599 -236781984 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 187 247 63 134 chr2 16474922 16475145 -236781438 + MIR SINE MIR 47 253 -9 278 264 103 70 chr2 16475281 16475454 -236781129 + MLT1J LTR MaLR 1 156 -294 556 145 0 103 chr2 16475575 16475684 -236780899 + MLT1J LTR MaLR 339 458 -53 2100 110 0 0 chr2 16475684 16475996 -236780587 + AluY SINE Alu 1 312 0 1998 134 20 0 chr2 16475999 16476297 -236780286 + AluSq SINE Alu 1 304 -9 556 145 0 103 chr2 16476297 16476327 -236780256 + MLT1J LTR MaLR 460 468 -43 338 308 51 8 chr2 16476890 16477007 -236779576 - L2 LINE L2 -1 3312 3191 189 273 68 0 chr2 16477071 16477115 -236779468 - L2 LINE L2 -75 3197 3151 233 366 99 30 chr2 16478290 16478421 -236778162 + L2 LINE L2 2600 2739 -575 293 338 51 13 chr2 16479083 16479240 -236777343 - MIR SINE MIR -65 197 35 240 269 30 30 chr2 16479240 16479307 -236777276 + L2 LINE L2 3232 3298 -15 472 287 100 32 chr2 16479409 16479907 -236776676 - L1ME4a LINE L1 -70 6051 5520 887 260 79 62 chr2 16480038 16480512 -236776071 - L1ME LINE L1 -549 5684 5192 2204 121 0 3 chr2 16480512 16480809 -236775774 + AluSc SINE Alu 1 296 -13 887 260 79 62 chr2 16480809 16480953 -236775630 - L1ME LINE L1 -1041 5192 5052 * 1166 270 31 47 chr2 16480951 16481622 -236774961 - L1MEc LINE L1 -3467 2748 2116 2893 251 50 60 chr2 16481660 16481785 -236774798 - L1MEc LINE L1 -4451 1945 1820 1672 174 24 17 chr2 16481785 16482078 -236774505 - AluJb SINE Alu -17 295 1 2893 251 50 60 chr2 16482078 16482878 -236773705 - L1MEc LINE L1 -4576 1820 1013 1822 134 76 10 chr2 16482878 16483169 -236773414 - AluSg SINE Alu 0 310 1 2893 251 50 60 chr2 16483169 16484130 -236772453 - L1MEc LINE L1 -5383 1013 37 242 271 0 0 chr2 16484131 16484190 -236772393 + MER5B DNA MER1_type 115 173 -5 323 303 86 45 chr2 16484204 16484429 -236772154 - L1ME4a LINE L1 -639 5482 5271 1683 172 72 19 chr2 16484431 16484751 -236771832 - MER44D DNA MER2_type 0 609 3 1888 156 175 80 chr2 16485218 16485300 -236771283 - MLT2B1 LTR ERVL 0 520 447 316 21 62 0 chr2 16485300 16485348 -236771235 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1888 156 175 80 chr2 16485348 16485740 -236770843 - MLT2B1 LTR ERVL -73 447 1 497 243 41 93 chr2 16486136 16486404 -236770179 - L1MCb LINE L1 -5471 574 321 373 328 8 15 chr2 16488076 16488207 -236768376 + MIR SINE MIR 17 146 -62 201 247 43 0 chr2 16489604 16489671 -236766912 - MIR SINE MIR -80 182 113 207 373 0 13 chr2 16489785 16489860 -236766723 + MIR3 SINE MIR 15 88 -120 406 338 63 34 chr2 16489925 16490194 -236766389 + L2 LINE L2 2608 2884 -430 206 329 0 55 chr2 16490520 16490593 -236765990 + L2 LINE L2 3245 3313 0 395 237 44 0 chr2 16491560 16491674 -236764909 + MIR SINE MIR 61 179 -83 377 276 41 0 chr2 16491872 16491970 -236764613 - MER94 DNA DNA -32 102 1 215 248 214 17 chr2 16492754 16492871 -236763712 + MIR3 SINE MIR 62 201 -7 264 240 177 0 chr2 16493039 16493135 -236763448 + L2 LINE L2 3201 3313 0 402 206 14 0 chr2 16493360 16493433 -236763150 + MER2 DNA MER2_type 1 74 -271 5297 140 18 13 chr2 16494257 16495093 -236761490 + L1MC1 LINE L1 5494 6333 0 248 296 169 12 chr2 16496390 16496562 -236760021 - MIR SINE MIR -4 258 60 2358 181 91 44 chr2 16496645 16497080 -236759503 + MLT2B1 LTR ERVL 1 463 -57 279 114 0 0 chr2 16497080 16497124 -236759459 + (TG)n Simple_repeat Simple_repeat 1 44 0 2358 181 91 44 chr2 16497124 16497185 -236759398 + MLT2B1 LTR ERVL 463 520 0 2304 107 7 0 chr2 16497452 16497761 -236758822 + AluSx SINE Alu 1 311 -1 213 355 71 12 chr2 16498214 16498383 -236758200 - MIR SINE MIR 0 262 84 209 303 56 63 chr2 16499116 16499258 -236757325 + MIR SINE MIR 52 192 -70 1909 204 52 12 chr2 16499725 16500126 -236756457 - MSTB LTR MaLR -2 424 8 2117 258 65 21 chr2 16500991 16501666 -236754917 - MER20B DNA MER1_type -14 769 65 370 254 29 43 chr2 16503728 16503866 -236752717 - L1ME LINE L1 -393 5728 5593 308 334 116 36 chr2 16505268 16505608 -236750975 + L2 LINE L2 2624 2997 -275 2008 135 28 0 chr2 16506046 16506335 -236750248 - AluSx SINE Alu -15 297 1 184 261 22 0 chr2 16507897 16507943 -236748640 + L2 LINE L2 3267 3313 0 202 352 0 11 chr2 16508190 16508278 -236748305 + L3 LINE CR1 1289 1375 -202 1932 271 110 27 chr2 16508312 16509020 -236747563 + LTR41 LTR ERVL 1 767 -6 27 29 0 0 chr2 16509353 16509387 -236747196 + AT_rich Low_complexity Low_complexity 1 34 0 493 273 182 16 chr2 16509398 16509585 -236746998 - MIR SINE MIR -16 246 29 268 357 77 58 chr2 16510313 16510638 -236745945 + L2 LINE L2 2942 3272 0 343 368 7 0 chr2 16510673 16510809 -236745774 + MIR3 SINE MIR 72 208 0 2076 150 16 0 chr2 16511426 16511798 -236744785 - AluSx SINE Alu 0 377 1 326 227 30 0 chr2 16512181 16512247 -236744336 - MIR SINE MIR -68 140 73 21 0 0 0 chr2 16512716 16512737 -236743846 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr2 16513487 16513527 -236743056 + AT_rich Low_complexity Low_complexity 1 40 0 315 274 55 62 chr2 16513608 16513754 -236742829 - HAL1 LINE L1 -740 1767 1623 610 249 67 79 chr2 16513770 16513849 -236742734 - HAL1 LINE L1 -976 1531 1453 195 42 0 0 chr2 16513849 16513873 -236742710 + (TC)n Simple_repeat Simple_repeat 1 24 0 610 249 67 79 chr2 16513873 16514007 -236742576 - HAL1 LINE L1 -1054 1453 1319 2034 73 0 22 chr2 16514007 16514279 -236742304 + AluY SINE Alu 1 266 -45 610 249 67 79 chr2 16514279 16514571 -236742012 - HAL1 LINE L1 -1188 1319 1031 22 70 0 0 chr2 16514588 16514631 -236741952 + AT_rich Low_complexity Low_complexity 1 43 0 1292 199 81 75 chr2 16515573 16515945 -236740638 - MLT1A2 LTR MaLR 0 374 1 6830 87 19 0 chr2 16515996 16517120 -236739463 + L1PA14 LINE L1 5023 6159 -2 22 0 0 0 chr2 16517230 16517252 -236739331 + AT_rich Low_complexity Low_complexity 1 22 0 267 300 153 40 chr2 16518297 16518447 -236738136 - MIR3 SINE MIR -23 185 19 1204 256 52 59 chr2 16518478 16518936 -236737647 + L2 LINE L2 2804 3258 -55 281 317 48 75 chr2 16519784 16519970 -236736613 + MIR3 SINE MIR 25 205 -3 183 355 32 0 chr2 16520318 16520411 -236736172 + L2 LINE L2 2942 3037 -235 330 265 151 52 chr2 16521722 16521858 -236734725 - MIR3 SINE MIR -53 155 4 327 298 115 25 chr2 16521938 16522173 -236734410 - LTR33 LTR ERVL -67 454 199 470 233 17 0 chr2 16522206 16522326 -236734257 - LTR33 LTR ERVL -387 134 13 5039 94 5 6 chr2 16522584 16523252 -236733331 - L1PA13 LINE L1 -2 6161 5495 890 276 124 49 chr2 16524361 16525122 -236731461 + L2 LINE L2 2448 3313 0 198 246 70 18 chr2 16525313 16525370 -236731213 + MIR SINE MIR 107 166 -96 247 270 0 0 chr2 16525761 16525824 -236730759 + MIR SINE MIR 161 223 -39 414 335 62 22 chr2 16526386 16526610 -236729973 - MIR SINE MIR -10 252 20 227 308 62 0 chr2 16526856 16526921 -236729662 + MIR3 SINE MIR 116 184 -24 1728 176 43 54 chr2 16527270 16527639 -236728944 - MLT1A1 LTR MaLR 0 365 1 2744 208 75 61 chr2 16528100 16529017 -236727566 - MER63C DNA MER1_type 0 930 1 328 303 55 35 chr2 16529658 16529803 -236726780 - MIR SINE MIR -16 246 99 1917 139 17 7 chr2 16529803 16530104 -236726479 - AluSx SINE Alu -8 304 1 21 36 0 0 chr2 16630551 16630579 -236626004 + GC_rich Low_complexity Low_complexity 1 28 0 2554 105 39 86 chr2 16630629 16631621 -236624962 + SVA Other Other 393 868 -520 3536 72 7 55 chr2 16631703 16632290 -236624293 + SVA Other Other 519 1077 -309 236 68 0 45 chr2 16632803 16632847 -236623736 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 187 396 113 17 chr2 16633041 16633579 -236623004 + L2 LINE L2 1821 2410 -904 3274 85 16 5 chr2 16633599 16634036 -236622547 - MLT2A1 LTR ERVL 0 444 3 1256 220 10 0 chr2 16634038 16634334 -236622249 - HERVL LTR ERVL 0 5654 5356 396 310 88 55 chr2 16634532 16634896 -236621687 - L1MEc LINE L1 -2368 4014 3639 312 278 128 39 chr2 16634926 16635207 -236621376 - L1MEc LINE L1 -2794 3588 3283 471 289 30 20 chr2 16635618 16635815 -236620768 + MLT1A2 LTR MaLR 1 199 -175 21 0 0 0 chr2 16635886 16635907 -236620676 + GC_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 16635960 16635985 -236620598 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr2 16636037 16636058 -236620525 + GC_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 16636086 16636109 -236620474 + GC_rich Low_complexity Low_complexity 1 23 0 296 29 0 0 chr2 16636221 16636255 -236620328 + (G)n Simple_repeat Simple_repeat 1 34 0 412 197 0 22 chr2 16636550 16636687 -236619896 + CT-rich Low_complexity Low_complexity 1 134 0 210 118 0 0 chr2 16637812 16637846 -236618737 + (CA)n Simple_repeat Simple_repeat 1 34 0 1579 158 217 17 chr2 16638232 16638637 -236617946 + MER51A LTR ERV1 1 486 -148 1856 119 58 7 chr2 16639051 16639328 -236617255 - AluSx SINE Alu -20 292 2 543 286 115 24 chr2 16639331 16639865 -236616718 - L2 LINE L2 -161 3152 2579 2149 89 14 3 chr2 16641939 16642231 -236614352 - AluY SINE Alu -14 297 3 203 329 0 14 chr2 16643178 16643248 -236613335 - MIR3 SINE MIR -49 159 91 1979 208 22 7 chr2 16643987 16644435 -236612148 - Tigger1 DNA MER2_type -1963 455 1 1680 228 55 84 chr2 16644440 16645368 -236611215 - L1MEc LINE L1 -3291 3091 2206 363 300 75 6 chr2 16645448 16645608 -236610975 - L1MEc LINE L1 -4271 2113 1943 231 217 109 0 chr2 16645949 16646041 -236610542 + MER76 LTR ERV 114 215 -473 468 138 43 11 chr2 16646066 16646160 -236610423 + MER76 LTR ERV 584 680 -8 232 353 66 0 chr2 16646307 16646429 -236610154 - MIR3 SINE MIR -19 189 60 224 263 128 45 chr2 16646528 16646661 -236609922 - L3 LINE CR1 -414 1163 1020 703 269 33 0 chr2 16646697 16646909 -236609674 + MER20 DNA MER1_type 1 219 0 1866 211 15 19 chr2 16647557 16647969 -236608614 + MER70B LTR ERVL 166 575 -3 240 246 16 0 chr2 16647981 16648042 -236608541 - MER58 DNA MER1_type -123 92 31 930 231 71 19 chr2 16648042 16648350 -236608233 - MLT1I-int LTR MaLR -797 574 251 21 0 0 0 chr2 16648628 16648649 -236607934 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr2 16649276 16649300 -236607283 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2064 149 0 3 chr2 16649334 16649630 -236606953 - AluSx SINE Alu -17 295 1 368 344 24 8 chr2 16650466 16650591 -236605992 + MIR SINE MIR 34 160 -102 425 311 19 30 chr2 16651231 16651501 -236605082 + AluJo SINE Alu 1 267 -45 2290 167 31 7 chr2 16651677 16652121 -236604462 - L1MC2 LINE L1 -426 5918 5464 347 309 13 19 chr2 16653078 16653292 -236603291 + C-rich Low_complexity Low_complexity 1 212 0 302 313 63 78 chr2 16654345 16654677 -236601906 - MLT1I LTR MaLR -2 407 81 406 268 9 36 chr2 16655816 16655928 -236600655 - MIR SINE MIR -135 127 19 238 333 83 9 chr2 16656918 16657026 -236599557 - MIR SINE MIR -80 182 67 274 23 47 0 chr2 16657293 16657336 -236599247 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 220 322 0 0 chr2 16657645 16657704 -236598879 + CT-rich Low_complexity Low_complexity 2 60 0 306 50 0 0 chr2 16658156 16658196 -236598387 + (TG)n Simple_repeat Simple_repeat 2 41 0 351 0 0 0 chr2 16658338 16658377 -236598206 + (ATG)n Simple_repeat Simple_repeat 1 39 0 305 275 0 11 chr2 16658803 16658894 -236597689 - MIR SINE MIR -57 205 116 310 253 121 43 chr2 16659013 16659270 -236597313 - L1M4 LINE L1 -2796 3350 3074 242 277 8 23 chr2 16659297 16659427 -236597156 + T-rich Low_complexity Low_complexity 3 130 0 390 262 29 10 chr2 16659445 16659548 -236597035 - MIR SINE MIR -113 149 45 1364 219 44 25 chr2 16659567 16659928 -236596655 + LTR9 LTR ERV1 245 612 0 1703 169 75 21 chr2 16659937 16660418 -236596165 - MLT2A2 LTR ERVL -44 510 2 352 0 42 0 chr2 16661204 16661252 -236595331 + (TG)n Simple_repeat Simple_repeat 2 51 0 198 317 99 70 chr2 16661430 16661572 -236595011 + MIR SINE MIR 7 152 -110 221 350 0 48 chr2 16662570 16662673 -236593910 + MIR SINE MIR 33 130 -78 354 156 0 0 chr2 16663738 16663802 -236592781 + (CA)n Simple_repeat Simple_repeat 2 65 0 316 250 0 0 chr2 16663833 16663905 -236592678 - MIR SINE MIR -106 156 85 704 234 40 54 chr2 16664301 16664523 -236592060 - MER20 DNA MER1_type 0 219 1 2424 159 34 2 chr2 16664868 16665229 -236591354 + MSTA LTR MaLR 1 378 -50 252 0 0 0 chr2 16665229 16665257 -236591326 + (TA)n Simple_repeat Simple_repeat 1 28 0 2424 159 34 2 chr2 16665257 16665310 -236591273 + MSTA LTR MaLR 378 428 0 1553 188 0 8 chr2 16665470 16665731 -236590852 + AluJo SINE Alu 39 297 -15 188 197 66 33 chr2 16665797 16665858 -236590725 - MIR SINE MIR -2 260 198 1758 220 39 11 chr2 16666788 16667170 -236589413 + MSTD LTR MaLR 4 396 0 199 238 12 24 chr2 16667540 16667624 -236588959 + G-rich Low_complexity Low_complexity 6 88 0 201 349 0 12 chr2 16667625 16667711 -236588872 + GA-rich Low_complexity Low_complexity 2 86 0 453 181 75 30 chr2 16667820 16667953 -236588630 + MSTC LTR MaLR 290 428 0 442 311 221 23 chr2 16668377 16668474 -236588109 - L2 LINE L2 -135 3178 3102 1002 79 0 7 chr2 16668474 16668614 -236587969 - MER85 DNA T2_type 0 139 1 442 311 221 23 chr2 16668614 16669045 -236587538 - L2 LINE L2 -211 3102 2543 353 353 86 11 chr2 16669794 16669981 -236586602 - L1ME3A LINE L1 -8 6162 5962 923 258 20 74 chr2 16670132 16670589 -236585994 - L1MC5 LINE L1 -495 7466 7035 839 215 211 15 chr2 16671983 16672248 -236584335 + MSTD LTR MaLR 1 317 -79 1152 159 171 27 chr2 16672269 16672523 -236584060 + MSTA LTR MaLR 1 306 -69 2415 118 21 16 chr2 16672523 16672896 -236583687 + THE1C LTR MaLR 1 375 0 1152 159 171 27 chr2 16672896 16672978 -236583605 + MSTA LTR MaLR 306 375 0 1263 301 91 60 chr2 16672978 16674390 -236582193 - L2 LINE L2 -32 3281 1820 469 165 173 45 chr2 16674737 16674870 -236581713 + MER3 DNA MER1_type 60 209 0 384 226 60 0 chr2 16674870 16674911 -236581672 - MER3 DNA MER1_type -162 47 2 190 257 95 68 chr2 16675754 16675828 -236580755 - MIR3 SINE MIR -50 158 83 275 331 53 38 chr2 16676294 16676427 -236580156 - L2 LINE L2 -4 3268 3134 260 240 140 10 chr2 16676566 16676666 -236579917 + LTR50 LTR ERVL 104 216 -579 248 185 56 0 chr2 16676692 16676746 -236579837 + LTR50 LTR ERVL 328 384 -411 25 31 0 0 chr2 16676885 16676917 -236579666 + AT_rich Low_complexity Low_complexity 1 32 0 257 284 14 0 chr2 16677001 16677080 -236579503 + HERVL LTR ERVL 559 630 -5024 2204 98 0 44 chr2 16677081 16677397 -236579186 - AluSg SINE Alu -8 302 1 339 332 77 19 chr2 16677526 16677785 -236578798 + HERVL LTR ERVL 858 1131 -4633 805 191 25 0 chr2 16677828 16677990 -236578593 + MLT1D LTR MaLR 340 505 0 250 252 96 35 chr2 16678403 16678518 -236578065 - L2 LINE L2 -227 3086 2965 1969 158 3 0 chr2 16679074 16679384 -236577199 + AluSq SINE Alu 3 313 0 1814 192 0 19 chr2 16680198 16680505 -236576078 + AluJb SINE Alu 1 301 -11 1738 157 4 0 chr2 16680603 16680864 -236575719 + AluSq SINE Alu 1 262 -51 392 196 17 73 chr2 16680879 16681058 -236575525 + (CACCC)n Simple_repeat Simple_repeat 3 171 0 283 306 115 32 chr2 16681781 16681938 -236574645 + MIR SINE MIR 93 262 0 1760 188 35 35 chr2 16682802 16683350 -236573233 + MLT2A2 LTR ERVL 3 554 0 21 0 0 0 chr2 16683369 16683390 -236573193 + AT_rich Low_complexity Low_complexity 1 21 0 1980 199 38 20 chr2 16683437 16683944 -236572639 - L1MB7 LINE L1 -7 6177 5662 726 236 19 34 chr2 16683945 16684208 -236572375 - L1MB7 LINE L1 -1617 4529 4271 415 270 9 0 chr2 16684212 16684327 -236572256 - L1MB7 LINE L1 -2234 3912 3797 208 278 10 0 chr2 16684426 16684523 -236572060 + (TA)n Simple_repeat Simple_repeat 2 99 0 1531 259 38 0 chr2 16684554 16685059 -236571524 - L1MB7 LINE L1 -2367 3779 3256 2231 244 43 31 chr2 16685067 16685144 -236571439 - L1MB7 LINE L1 -2985 3161 3086 2376 87 0 7 chr2 16685144 16685454 -236571129 - AluSx SINE Alu -4 308 1 2231 244 43 31 chr2 16685454 16686072 -236570511 - L1MB7 LINE L1 -3060 3086 2452 258 81 0 0 chr2 16686072 16686109 -236570474 + (TG)n Simple_repeat Simple_repeat 2 38 0 2231 244 43 31 chr2 16686109 16686225 -236570358 - L1MB7 LINE L1 -3694 2452 2339 * 4164 234 72 77 chr2 16686221 16687667 -236568916 - L1M4c LINE L1 -4146 2679 1228 2154 106 0 3 chr2 16687667 16687986 -236568597 - AluSx SINE Alu 0 318 1 4164 234 72 77 chr2 16687986 16688112 -236568471 - L1M4c LINE L1 -5597 1228 1103 231 88 0 0 chr2 16688112 16688146 -236568437 + (TTG)n Simple_repeat Simple_repeat 3 36 0 4164 234 72 77 chr2 16688146 16689077 -236567506 - L1M4c LINE L1 -5722 1103 17 21 36 0 0 chr2 16689091 16689119 -236567464 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 16691280 16691301 -236565282 + AT_rich Low_complexity Low_complexity 1 21 0 12851 176 36 15 chr2 16691660 16691826 -236564757 - L1MA3 LINE L1 -11 7713 7552 2128 123 0 0 chr2 16691826 16692118 -236564465 + AluSg SINE Alu 3 294 -16 12851 176 36 15 chr2 16692118 16695716 -236560867 - L1MA3 LINE L1 -172 7552 3866 451 87 43 0 chr2 16695699 16695768 -236560815 - L1MA3 LINE L1 -3927 3638 3567 * 10792 186 78 31 chr2 16695770 16697402 -236559181 - L1MA3 LINE L1 -4099 3466 2012 7904 97 11 17 chr2 16697402 16699382 -236557201 - L1PA8 LINE L1 0 6172 4198 10792 186 78 31 chr2 16699382 16700860 -236555723 - L1MA3 LINE L1 -5553 2012 605 260 273 67 79 chr2 16700978 16701143 -236555440 + MER103 DNA DNA 3 165 -1 385 336 24 8 chr2 16701629 16701754 -236554829 + MIR SINE MIR 34 160 -102 1554 178 14 14 chr2 16702394 16702681 -236553902 + AluJo SINE Alu 1 287 -25 253 262 85 61 chr2 16703877 16704041 -236552542 - L2 LINE L2 -37 3276 3109 262 338 83 7 chr2 16704350 16704495 -236552088 - MLT1L LTR MaLR -392 223 68 218 306 106 12 chr2 16704503 16704588 -236551995 - L2 LINE L2 -266 3047 2955 306 271 35 0 chr2 16704599 16704684 -236551899 - MIR SINE MIR -8 254 167 1000 139 6 0 chr2 16704686 16704844 -236551739 - MLT2D LTR ERVL -246 168 10 1288 315 192 28 chr2 16704944 16706197 -236550386 + L2 LINE L2 931 2389 -925 281 236 0 14 chr2 16706642 16706714 -236549869 - LTR66 LTR ERVL -172 438 368 867 300 108 27 chr2 16706807 16706941 -236549642 - L2 LINE L2 -9 3304 3182 210 71 0 0 chr2 16706941 16706969 -236549614 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 867 300 108 27 chr2 16706969 16707204 -236549379 - L2 LINE L2 -131 3182 2905 225 398 26 18 chr2 16707616 16707729 -236548854 - L2 LINE L2 -21 3251 3138 211 325 162 0 chr2 16707813 16707930 -236548653 + MIR SINE MIR 62 197 -65 201 333 26 0 chr2 16708778 16708856 -236547727 - L2 LINE L2 0 3313 3234 1696 198 46 48 chr2 16709377 16709624 -236546959 - MLT2D LTR ERVL 0 414 167 1885 169 36 3 chr2 16709624 16709956 -236546627 - MER61A LTR ERV1 0 343 1 1696 198 46 48 chr2 16709956 16710123 -236546460 - MLT2D LTR ERVL -247 167 1 240 167 0 0 chr2 16710271 16710319 -236546264 + (TCCA)n Simple_repeat Simple_repeat 4 51 0 284 193 0 35 chr2 16710434 16710491 -236546092 - MIR3 SINE MIR -27 181 127 26 30 0 0 chr2 16711012 16711045 -236545538 + AT_rich Low_complexity Low_complexity 1 33 0 591 197 98 0 chr2 16711046 16711168 -236545415 - AluJo SINE Alu -178 134 1 22 35 0 0 chr2 16711217 16711246 -236545337 + AT_rich Low_complexity Low_complexity 1 29 0 478 150 24 24 chr2 16713800 16713927 -236542656 + CT-rich Low_complexity Low_complexity 4 130 0 319 301 34 91 chr2 16714824 16715033 -236541550 - MIR SINE MIR -56 206 10 933 223 45 18 chr2 16715761 16715981 -236540602 - MIR SINE MIR -6 256 31 617 135 129 31 chr2 16716091 16716254 -236540329 + MER53 DNA DNA 10 188 -1 382 368 42 10 chr2 16717830 16718023 -236538560 - MIR SINE MIR -63 199 1 188 289 0 0 chr2 16718737 16718782 -236537801 + L3 LINE CR1 1524 1568 -9 4141 138 38 28 chr2 16719359 16720079 -236536504 + MER50 LTR ERV1 1 727 -7 559 284 110 21 chr2 16720113 16720349 -236536234 + MIR SINE MIR 3 259 -3 277 57 0 0 chr2 16720773 16720808 -236535775 - MADE1 DNA Mariner 0 80 46 1582 161 62 4 chr2 16721808 16722082 -236534501 - AluJo SINE Alu -22 290 1 942 191 21 2 chr2 16722431 16722646 -236533937 + L1MA8 LINE L1 5724 5939 -361 705 259 38 34 chr2 16722860 16723324 -236533259 - L1MEc LINE L1 -1949 4266 657 321 367 41 38 chr2 16723528 16723869 -236532714 - L1MEc LINE L1 -5918 478 137 3253 137 16 11 chr2 16724424 16724988 -236531595 + L1PBa LINE L1 1468 2034 -4829 247 368 128 32 chr2 16725170 16725701 -236530882 + L2 LINE L2 2535 3118 -154 311 288 12 0 chr2 16725893 16725973 -236530610 - MIR3 SINE MIR -16 192 112 27 29 0 0 chr2 16726551 16726585 -236529998 + AT_rich Low_complexity Low_complexity 1 34 0 238 150 0 0 chr2 16727050 16727090 -236529493 - LTR67 LTR ERVL -21 536 497 347 322 31 46 chr2 16727098 16727359 -236529224 - MER65A LTR ERV1 -2 443 187 21 0 0 0 chr2 16727792 16727813 -236528770 + AT_rich Low_complexity Low_complexity 1 21 0 299 228 100 118 chr2 16727927 16728251 -236528332 - MER65B LTR ERV1 -146 385 68 1974 124 112 6 chr2 16728251 16728590 -236527993 - THE1C LTR MaLR 0 375 1 299 228 100 118 chr2 16728590 16728656 -236527927 - MER65B LTR ERV1 -463 68 2 263 275 208 20 chr2 16729058 16729207 -236527376 - L2 LINE L2 -25 3288 3112 255 408 8 8 chr2 16729805 16729925 -236526658 + MIR SINE MIR 23 142 -66 251 193 35 0 chr2 16730899 16730956 -236525627 + CT-rich Low_complexity Low_complexity 3 61 0 21 36 0 0 chr2 16731577 16731605 -236524978 + AT_rich Low_complexity Low_complexity 1 28 0 2499 50 3 3 chr2 16732097 16732397 -236524186 - AluY SINE Alu -11 300 1 21 0 0 0 chr2 16733172 16733193 -236523390 + AT_rich Low_complexity Low_complexity 1 21 0 1011 141 17 23 chr2 16733368 16733545 -236523038 - MER2 DNA MER2_type -48 297 122 511 75 88 0 chr2 16733545 16733625 -236522958 - L1MA1 LINE L1 -135 6167 6081 257 36 0 214 chr2 16733625 16733709 -236522874 + L1MA2 LINE L1 6239 6304 0 726 178 0 68 chr2 16733729 16733875 -236522708 - MER2 DNA MER2_type -209 136 1 213 39 0 0 chr2 16733875 16733901 -236522682 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 26 0 0 0 chr2 16733928 16733954 -236522629 + AT_rich Low_complexity Low_complexity 1 26 0 806 271 5 0 chr2 16734471 16734663 -236521920 + MLT1J LTR MaLR 1 193 -318 973 113 60 0 chr2 16734794 16734945 -236521638 - MLT2A1 LTR ERVL 0 444 285 778 79 26 0 chr2 16734945 16735059 -236521524 - MLT2A2 LTR ERVL -336 117 1 27979 73 16 6 chr2 16735059 16738869 -236517714 - HERVL-A2 LTR ERVL 0 5654 1808 279 224 0 13 chr2 16738896 16738972 -236517611 + MLT1J LTR MaLR 427 501 -10 2136 137 50 6 chr2 16738983 16739342 -236517241 + THE1C LTR MaLR 1 375 0 27 0 0 0 chr2 16739948 16739975 -236516608 + AT_rich Low_complexity Low_complexity 1 27 0 1879 153 45 11 chr2 16740286 16740639 -236515944 + L1PB4 LINE L1 5790 6154 -2 1983 173 12 26 chr2 16740694 16741116 -236515467 + Tigger2a DNA MER2_type 12 427 -7 374 315 159 19 chr2 16741190 16741498 -236515085 - L1ME LINE L1 -434 5736 5386 2118 92 0 14 chr2 16741587 16741869 -236514714 - AluY SINE Alu -33 278 1 21 0 0 0 chr2 16741969 16741990 -236514593 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr2 16742414 16742453 -236514130 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 16742470 16742492 -236514091 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr2 16742554 16742583 -236514000 + AT_rich Low_complexity Low_complexity 1 29 0 957 233 19 20 chr2 16742652 16742929 -236513654 + MLT2D LTR ERVL 66 342 -72 2094 124 7 0 chr2 16743350 16743660 -236512923 - AluSg SINE Alu 0 312 1 319 231 103 0 chr2 16743684 16743762 -236512821 + L2 LINE L2 3192 3277 -36 2033 112 47 0 chr2 16743981 16744259 -236512324 - AluSx SINE Alu -21 291 1 23 33 0 0 chr2 16744604 16744634 -236511949 + AT_rich Low_complexity Low_complexity 1 30 0 3330 73 35 0 chr2 16744789 16745216 -236511367 + MLT2A1 LTR ERVL 3 444 0 22539 85 12 7 chr2 16745216 16745632 -236510951 + HERVL-A1 LTR ERVL 1 413 -5241 1543 23 0 0 chr2 16745632 16745808 -236510775 + L1PA5 LINE L1 5968 6143 -11 240 35 0 0 chr2 16745809 16745838 -236510745 + (TA)n Simple_repeat Simple_repeat 1 29 0 22539 85 12 7 chr2 16745838 16748570 -236508013 + HERVL-A1 LTR ERVL 412 3168 -2486 1073 81 7 0 chr2 16748566 16748715 -236507868 - HERVL LTR ERVL -3797 1857 1708 * 1197 99 0 0 chr2 16748712 16748883 -236507700 + HERVL-A1 LTR ERVL 3171 3341 -2313 3776 150 42 70 chr2 16748885 16749693 -236506890 - LTR1 LTR ERV1 0 785 1 2696 134 25 16 chr2 16749740 16750189 -236506394 - HUERS-P2 LTR ERV1 -5 3083 2631 1057 86 33 0 chr2 16750264 16750415 -236506168 + LTR1 LTR ERV1 434 589 -196 737 86 0 243 chr2 16750416 16750638 -236505945 + MLT2A1 LTR ERVL 277 444 0 27 0 0 0 chr2 16752526 16752553 -236504030 + AT_rich Low_complexity Low_complexity 1 27 0 760 95 0 95 chr2 16752582 16752719 -236503864 + FLAM_C SINE Alu 20 143 0 26 0 0 0 chr2 16752720 16752746 -236503837 + AT_rich Low_complexity Low_complexity 1 26 0 2053 146 0 31 chr2 16752986 16753308 -236503275 + AluSx SINE Alu 1 312 0 2371 175 39 0 chr2 16753662 16754153 -236502430 - MER45B DNA AcHobo -11 1029 520 558 278 69 0 chr2 16754155 16754328 -236502255 - MER45B DNA AcHobo -703 337 153 309 289 27 52 chr2 16754869 16755103 -236501480 - L1 LINE L1 -1279 4867 4640 462 309 111 36 chr2 16755180 16755487 -236501096 - L1 LINE L1 -1783 4363 4034 24 0 0 0 chr2 16755566 16755590 -236500993 + AT_rich Low_complexity Low_complexity 1 24 0 25 75 0 0 chr2 16755993 16756046 -236500537 + AT_rich Low_complexity Low_complexity 1 53 0 221 224 15 15 chr2 16756366 16756433 -236500150 + T-rich Low_complexity Low_complexity 3 69 0 325 256 53 23 chr2 16756576 16756709 -236499874 - HAL1 LINE L1 -871 1636 1500 1820 180 0 3 chr2 16756848 16757159 -236499424 + AluJo SINE Alu 1 310 -2 339 354 10 29 chr2 16757433 16757639 -236498944 - L1MEd LINE L1 -5047 1072 871 408 65 0 32 chr2 16758033 16758095 -236498488 - Charlie3 DNA MER1_type -8 2702 2643 * 16267 103 9 15 chr2 16758093 16759799 -236496784 - Charlie3 DNA MER1_type -239 2467 778 2076 147 13 32 chr2 16759799 16760179 -236496404 - THE1C LTR MaLR -2 373 1 16267 103 9 15 chr2 16760179 16760908 -236495675 - Charlie3 DNA MER1_type -1928 778 46 436 88 0 0 chr2 16761226 16761294 -236495289 + L1MA3 LINE L1 6238 6305 0 397 214 151 31 chr2 16761299 16761458 -236495125 + L1M4 LINE L1 3023 3200 -2946 271 331 45 64 chr2 16761727 16761884 -236494699 - MIR SINE MIR -108 154 1 274 339 73 23 chr2 16762183 16762360 -236494223 + MIR SINE MIR 50 235 -27 3692 231 51 83 chr2 16762479 16762837 -236493746 + L1M4 LINE L1 2451 2819 -3327 832 81 0 0 chr2 16762837 16762948 -236493635 + AluY SINE Alu 200 310 -1 3692 231 51 83 chr2 16762948 16763800 -236492783 + L1M4 LINE L1 2819 3696 -2450 2384 79 0 0 chr2 16763800 16764092 -236492491 - AluSp SINE Alu -21 292 1 3692 231 51 83 chr2 16764092 16764650 -236491933 + L1M4 LINE L1 3696 4270 -1876 537 187 32 8 chr2 16764667 16764790 -236491793 + L1MB7 LINE L1 6059 6184 0 481 211 16 0 chr2 16766270 16766398 -236490185 + GA-rich Low_complexity Low_complexity 3 132 0 553 259 85 21 chr2 16766607 16766796 -236489787 + MIR SINE MIR 47 247 -15 271 206 130 54 chr2 16767826 16767918 -236488665 + L2 LINE L2 3198 3296 -17 229 286 61 0 chr2 16767932 16768030 -236488553 + L1ME4a LINE L1 5992 6095 -26 410 317 55 18 chr2 16769368 16769532 -236487051 + MIR SINE MIR 21 190 -72 3422 129 27 15 chr2 16770893 16771414 -236485169 + MER1A DNA MER1_type 1 527 0 9284 27 0 8 chr2 16771485 16772696 -236483887 - L1PA3 LINE L1 -2391 3755 2555 13920 23 5 0 chr2 16772696 16775111 -236481472 + L1PA3 LINE L1 3750 6168 0 248 322 56 22 chr2 16775827 16775917 -236480666 + L3 LINE CR1 1279 1371 -206 4525 134 10 34 chr2 16775951 16776320 -236480263 - L1PB4 LINE L1 0 6156 5780 279 0 0 0 chr2 16776320 16776351 -236480232 + (TG)n Simple_repeat Simple_repeat 2 32 0 4525 134 10 34 chr2 16776351 16776812 -236479771 - L1PB4 LINE L1 -376 5780 5346 598 226 52 94 chr2 16777597 16777925 -236478658 - LTR37A LTR ERV1 -2 424 111 219 292 42 41 chr2 16781034 16781223 -236475360 - L2 LINE L2 -302 2970 2791 186 333 0 0 chr2 16781365 16781413 -236475170 - L2 LINE L2 -678 2636 2589 209 221 135 77 chr2 16781453 16781557 -236475026 + L2 LINE L2 3178 3287 -26 312 263 117 23 chr2 16781898 16782069 -236474514 - L1ME3A LINE L1 -222 5948 5762 225 264 107 50 chr2 16782825 16782946 -236473637 + MIR SINE MIR 85 212 -50 1855 194 30 89 chr2 16783141 16783637 -236472946 + MLT1C LTR MaLR 1 467 0 1771 183 3 0 chr2 16783729 16784014 -236472569 + AluJb SINE Alu 2 287 -25 503 322 113 27 chr2 16784103 16784476 -236472107 + L1ME4a LINE L1 5378 5782 -339 707 210 6 54 chr2 16784550 16784670 -236471913 + Charlie1 DNA MER1_type 1 112 -2649 2214 128 0 0 chr2 16784670 16784974 -236471609 - AluSg SINE Alu -6 304 1 707 210 6 54 chr2 16784974 16785020 -236471563 + Charlie1 DNA MER1_type 112 159 -2602 1322 196 99 35 chr2 16785026 16785317 -236471266 + Charlie1 DNA MER1_type 2307 2636 -125 2149 57 45 0 chr2 16785317 16785587 -236470996 + AluY SINE Alu 1 282 -29 282 48 48 0 chr2 16785587 16785629 -236470954 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1322 196 99 35 chr2 16785629 16785759 -236470824 + Charlie1 DNA MER1_type 2636 2756 -5 311 271 42 0 chr2 16785834 16785952 -236470631 + L1ME4a LINE L1 5992 6114 -7 205 317 195 24 chr2 16786303 16786467 -236470116 - L3 LINE CR1 -11 1566 1375 840 228 0 12 chr2 16786549 16786716 -236469867 - FRAM SINE Alu -10 166 2 187 145 133 72 chr2 16786742 16786825 -236469758 + MIR SINE MIR 145 232 -30 2325 91 3 0 chr2 16787975 16788271 -236468312 + AluSp SINE Alu 1 297 -16 192 152 0 0 chr2 16789168 16789201 -236467382 + (TG)n Simple_repeat Simple_repeat 2 34 0 6151 61 65 13 chr2 16790732 16791881 -236464702 + L1PA7 LINE L1 4969 6150 -4 2412 135 5 13 chr2 16791978 16792356 -236464227 - THE1C LTR MaLR 0 375 1 4666 180 29 3 chr2 16792417 16793920 -236462663 + L1PA16 LINE L1 4628 6166 0 497 249 20 43 chr2 16793925 16794147 -236462436 + L1ME LINE L1 5471 5686 -478 272 310 94 25 chr2 16794308 16794553 -236462030 + HAL1b LINE L1 83 344 -1004 * 318 265 22 38 chr2 16794550 16794735 -236461848 + HAL1b LINE L1 641 822 -526 304 308 53 81 chr2 16795687 16795934 -236460649 + L1M2a LINE L1 344 583 -6585 1021 252 35 46 chr2 16796181 16796681 -236459902 - PABL_B LTR ERV1 -20 647 2 329 258 371 0 chr2 16797356 16797515 -236459068 - MIR SINE MIR -41 221 4 229 294 49 29 chr2 16798208 16798310 -236458273 + L2 LINE L2 3137 3240 -32 383 122 51 0 chr2 16798736 16798834 -236457749 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 1261 188 110 99 chr2 16798843 16798946 -236457637 + MLT1D LTR MaLR 27 127 -378 1971 154 7 0 chr2 16798946 16799239 -236457344 + AluSx SINE Alu 1 295 -17 1261 188 110 99 chr2 16799239 16799609 -236456974 + MLT1D LTR MaLR 127 505 0 1108 187 24 125 chr2 16799615 16799984 -236456599 - MLT1C LTR MaLR 0 390 59 451 357 30 30 chr2 16800199 16800468 -236456115 + L3 LINE CR1 1067 1335 -242 1241 267 65 29 chr2 16800650 16801096 -236455487 - LTR40b LTR ERVL 0 462 1 963 225 15 59 chr2 16801108 16801439 -236455144 - HERVL40 LTR ERVL -8 5522 2803 1254 59 5 48 chr2 16801967 16802154 -236454429 + L1PA11 LINE L1 5994 6172 -2 705 274 82 105 chr2 16802396 16802798 -236453785 - HERVL40 LTR ERVL -613 4671 2036 * 1717 246 28 43 chr2 16802794 16803241 -236453342 - HERVL40 LTR ERVL -1237 4293 3854 1236 153 161 15 chr2 16803241 16803502 -236453081 + AluJo SINE Alu 1 299 -3 1717 246 28 43 chr2 16803502 16803587 -236452996 - HERVL40 LTR ERVL -1676 3854 3769 2095 141 0 3 chr2 16803588 16803900 -236452683 + AluSq SINE Alu 3 313 0 348 246 56 56 chr2 16803902 16804044 -236452539 - HERVL40 LTR ERVL -1747 3783 3642 221 317 12 24 chr2 16804482 16804564 -236452019 - L2 LINE L2 -6 3307 3227 223 191 44 44 chr2 16805003 16805071 -236451512 + (CTTTA)n Simple_repeat Simple_repeat 5 72 0 185 372 58 45 chr2 16805243 16805399 -236451184 - L2 LINE L2 -763 2551 2394 340 315 108 21 chr2 16805464 16805780 -236450803 - L2 LINE L2 -1071 2243 1840 1652 179 47 0 chr2 16805972 16806251 -236450332 - AluJb SINE Alu -8 304 13 2222 116 0 3 chr2 16806868 16807199 -236449384 - AluSg SINE Alu 0 330 1 2312 81 0 0 chr2 16807510 16807817 -236448766 + L1PA8A LINE L1 5807 6113 -18 210 91 0 0 chr2 16807824 16807857 -236448726 + (CATA)n Simple_repeat Simple_repeat 2 34 0 360 0 0 0 chr2 16808973 16809013 -236447570 + (TG)n Simple_repeat Simple_repeat 1 40 0 402 294 132 35 chr2 16809569 16809858 -236446725 - L2 LINE L2 -915 2399 2083 192 239 0 0 chr2 16810578 16810624 -236445959 - MIR SINE MIR -97 111 66 1583 169 33 4 chr2 16810681 16810996 -236445587 - AluJb SINE Alu 0 323 1 385 251 59 39 chr2 16813353 16813556 -236443027 - L1ME2 LINE L1 -9 6155 5949 339 338 70 6 chr2 16813584 16813741 -236442842 - L1MEc LINE L1 -6194 202 36 249 139 0 0 chr2 16814301 16814344 -236442239 + (GGGAA)n Simple_repeat Simple_repeat 3 45 0 715 312 39 13 chr2 16815152 16815383 -236441200 + MIR SINE MIR 3 239 -23 265 246 31 0 chr2 16815383 16815448 -236441135 - MSTC LTR MaLR -356 72 6 1789 166 28 0 chr2 16816003 16816293 -236440290 + AluJb SINE Alu 1 298 -14 202 374 42 24 chr2 16816658 16816824 -236439759 - MIR3 SINE MIR 0 208 40 368 327 0 0 chr2 16817710 16817820 -236438763 - MER81 DNA DNA 0 114 5 1746 150 200 11 chr2 16817826 16818186 -236438397 - MSTA LTR MaLR 0 428 1 1959 104 3 13 chr2 16818186 16818495 -236438088 - MSTA-int LTR MaLR 0 1580 1275 180 0 0 0 chr2 16818695 16818715 -236437868 + (A)n Simple_repeat Simple_repeat 1 20 0 30 0 0 0 chr2 16818815 16818845 -236437738 + AT_rich Low_complexity Low_complexity 1 30 0 40 21 0 0 chr2 16819713 16819760 -236436823 + AT_rich Low_complexity Low_complexity 1 47 0 485 324 163 28 chr2 16820123 16820546 -236436037 + L1MC4a LINE L1 5696 6175 -1633 29 28 0 0 chr2 16820704 16820740 -236435843 + AT_rich Low_complexity Low_complexity 1 36 0 1170 213 46 72 chr2 16820769 16821338 -236435245 + L1MC5 LINE L1 7109 7662 -299 339 235 0 0 chr2 16821368 16821453 -236435130 - MER53 DNA DNA -8 181 97 234 174 0 0 chr2 16821525 16821571 -236435012 + (TA)n Simple_repeat Simple_repeat 1 46 0 410 231 30 41 chr2 16821640 16821809 -236434774 + L1MC5 LINE L1 7719 7885 -76 23 33 0 0 chr2 16821827 16821857 -236434726 + AT_rich Low_complexity Low_complexity 1 30 0 323 302 9 19 chr2 16822488 16822594 -236433989 - MIR3 SINE MIR -54 154 50 13945 142 22 20 chr2 16823684 16824096 -236432487 + Tigger1 DNA MER2_type 1 410 -2008 1278 161 203 0 chr2 16824096 16824362 -236432221 + AluSp SINE Alu 1 314 0 13945 142 22 20 chr2 16824362 16826360 -236430223 + Tigger1 DNA MER2_type 410 2418 0 454 203 17 0 chr2 16826805 16826923 -236429660 + GA-rich Low_complexity Low_complexity 2 121 0 28 61 0 0 chr2 16827184 16827233 -236429350 + AT_rich Low_complexity Low_complexity 1 49 0 2399 180 9 5 chr2 16827500 16827949 -236428634 + LOR1b LTR ERV1 1 451 -10 719 322 142 34 chr2 16827995 16828857 -236427726 - L2 LINE L2 0 3313 2377 22 0 0 0 chr2 16828996 16829018 -236427565 + AT_rich Low_complexity Low_complexity 1 22 0 389 304 104 0 chr2 16829419 16829534 -236427049 + MER91B DNA MER1_type 20 146 -44 475 309 58 16 chr2 16829573 16829764 -236426819 - MIR SINE MIR -60 202 4 6509 51 4 0 chr2 16830825 16831631 -236424952 + L1PA7 LINE L1 5346 6154 0 300 280 247 27 chr2 16831661 16831808 -236424775 + L3 LINE CR1 1060 1258 -319 1232 195 121 76 chr2 16831808 16832295 -236424288 - LTR54 LTR ERV1 -1 509 1 300 280 247 27 chr2 16832295 16832333 -236424250 + L3 LINE CR1 1258 1286 -291 258 203 39 23 chr2 16832346 16832355 -236424228 + (TA)n Simple_repeat Simple_repeat 2 9 -122 207 0 0 0 chr2 16832355 16832378 -236424205 + (TG)n Simple_repeat Simple_repeat 2 24 0 258 203 39 23 chr2 16832378 16832496 -236424087 + (TA)n Simple_repeat Simple_repeat 9 131 0 352 326 90 34 chr2 16832496 16832729 -236423854 + L3 LINE CR1 1292 1537 -40 264 289 148 44 chr2 16833215 16833350 -236423233 - MIR SINE MIR -62 200 52 423 326 143 9 chr2 16833367 16833597 -236422986 + MIR SINE MIR 2 262 0 321 293 33 50 chr2 16833835 16834016 -236422567 + L1ME LINE L1 5098 5275 -871 1365 315 61 54 chr2 16834042 16835077 -236421506 - L2 LINE L2 -5 3308 2272 232 224 0 20 chr2 16835121 16835170 -236421413 + G-rich Low_complexity Low_complexity 1 48 0 641 387 58 17 chr2 16835239 16835601 -236420982 - L2 LINE L2 -2777 537 161 3234 199 29 18 chr2 16836013 16836696 -236419887 + MER54A LTR ERVL 15 894 -7 2228 112 75 26 chr2 16836715 16837062 -236419521 + THE1B LTR MaLR 1 364 0 2042 179 91 17 chr2 16837385 16837848 -236418735 + MLT1D LTR MaLR 2 498 -7 310 345 112 4 chr2 16837995 16838227 -236418356 + L1ME LINE L1 5309 5565 -597 322 237 97 9 chr2 16838479 16838593 -236417990 + L1MA7 LINE L1 6161 6284 -7 1295 247 142 13 chr2 16838658 16839367 -236417216 + L1ME2 LINE L1 5092 5894 -270 1506 183 67 0 chr2 16839367 16839689 -236416894 + AluJb SINE Alu 1 340 0 673 245 13 0 chr2 16839736 16839895 -236416688 + L1ME2 LINE L1 5879 6039 -125 32 26 0 0 chr2 16840205 16840244 -236416339 + AT_rich Low_complexity Low_complexity 1 39 0 2994 235 33 16 chr2 16841233 16841981 -236414602 - L1ME1 LINE L1 -5 6230 5470 1405 260 46 16 chr2 16842130 16842912 -236413671 - L1ME1 LINE L1 -3857 2358 647 1758 309 9 33 chr2 16842913 16843492 -236413091 - L1ME1 LINE L1 -5797 599 35 1298 308 44 33 chr2 16843494 16844356 -236412227 - L1M3b LINE L1 -4286 2110 1266 2803 135 21 63 chr2 16844360 16844931 -236411652 - L1M3 LINE L1 -366 5802 5256 757 199 6 74 chr2 16844942 16845044 -236411539 - L1M3 LINE L1 -854 5292 5185 2084 135 93 9 chr2 16845044 16845378 -236411205 + THE1B LTR MaLR 3 364 0 12545 93 10 0 chr2 16845379 16846943 -236409640 + THE1B-int LTR MaLR 2 1580 0 2407 120 42 25 chr2 16846943 16847300 -236409283 + THE1B LTR MaLR 1 363 -1 757 199 6 74 chr2 16847300 16847421 -236409162 - L1M3 LINE L1 -959 5187 5086 * 3265 229 31 3 chr2 16847416 16848184 -236408399 + L1M3 LINE L1 4304 5093 -1053 1522 159 116 29 chr2 16848239 16848515 -236408068 - AluJb SINE Alu -8 304 5 1056 47 0 0 chr2 16848661 16848788 -236407795 + HERV17 LTR ERV1 8500 8626 0 2562 40 28 31 chr2 16848788 16849113 -236407470 + LTR17 LTR ERV1 1 324 -456 1030 112 13 0 chr2 16849187 16849339 -236407244 - MER11B LTR ERVK -23 1213 1060 29 28 0 0 chr2 16849351 16849387 -236407196 + AT_rich Low_complexity Low_complexity 1 36 0 636 226 47 94 chr2 16849979 16850213 -236406370 - MER39 LTR ERV1 -214 493 271 231 247 59 47 chr2 16850199 16850284 -236406299 - LTR48B LTR ERV1 -555 89 4 * 272 338 186 8 chr2 16850794 16851057 -236405526 + L3 LINE CR1 271 580 -997 1718 146 42 3 chr2 16851129 16851417 -236405166 + AluSx SINE Alu 3 301 -11 293 328 40 24 chr2 16851730 16851760 -236404823 - MIR SINE MIR -83 179 151 1204 249 120 15 chr2 16851760 16852153 -236404430 + MER57B LTR ERV1 1 434 0 293 328 40 24 chr2 16852153 16852247 -236404336 - MIR SINE MIR -111 151 53 594 252 35 0 chr2 16852910 16853053 -236403530 - MIR SINE MIR -108 154 7 784 190 41 56 chr2 16853109 16853304 -236403279 + MER72 LTR ERV1 3 194 -528 579 138 0 11 chr2 16853304 16853381 -236403202 + THE1C LTR MaLR 1 78 -297 2864 90 58 21 chr2 16853381 16853813 -236402770 + LTR7 LTR ERV1 1 448 -2 20337 93 14 20 chr2 16853822 16856819 -236399764 + HERVH LTR ERV1 8 2987 -4726 889 149 20 0 chr2 16856813 16856961 -236399622 + HERVH LTR ERV1 3140 3290 -4423 * 3451 104 6 0 chr2 16856960 16857451 -236399132 + HERVH LTR ERV1 3500 3993 -3720 4312 151 3 1 chr2 16857453 16858114 -236398469 + HERVH LTR ERV1 4488 5149 -2564 2617 94 43 33 chr2 16858115 16858709 -236397874 + HERVH LTR ERV1 5600 7713 0 2861 86 60 21 chr2 16858709 16859140 -236397443 + LTR7 LTR ERV1 1 448 -2 2237 113 3 0 chr2 16859142 16859444 -236397139 + THE1C LTR MaLR 73 375 0 489 188 42 0 chr2 16859444 16859539 -236397044 + MER72 LTR ERV1 190 288 -434 1597 179 186 13 chr2 16859561 16859786 -236396797 - MER31B LTR ERV1 0 466 281 2772 144 28 19 chr2 16859786 16860210 -236396373 + MSTA LTR MaLR 1 428 0 1597 179 186 13 chr2 16860210 16860381 -236396202 - MER31B LTR ERV1 -185 281 1 233 344 47 23 chr2 16860421 16860549 -236396034 + MIR3 SINE MIR 14 144 -64 2426 143 14 45 chr2 16860640 16861061 -236395522 - MER72 LTR ERV1 -4 718 311 366 159 0 0 chr2 16861076 16861139 -236395444 + MER31B LTR ERV1 404 466 0 283 252 81 36 chr2 16861613 16861724 -236394859 + MIR SINE MIR 117 232 -30 880 195 0 13 chr2 16861986 16862145 -236394438 + FRAM SINE Alu 1 157 -19 181 342 75 17 chr2 16862168 16862288 -236394295 + MIR SINE MIR 124 250 -12 254 269 10 67 chr2 16862660 16862764 -236393819 - MIR3 SINE MIR -15 193 96 338 277 223 22 chr2 16863017 16863378 -236393205 + L2 LINE L2 2787 3221 -51 21 36 0 0 chr2 16863558 16863586 -236392997 + AT_rich Low_complexity Low_complexity 1 28 0 370 333 0 25 chr2 16863705 16863867 -236392716 + CT-rich Low_complexity Low_complexity 4 161 0 1964 151 0 10 chr2 16864818 16865117 -236391466 + AluSx SINE Alu 1 296 -16 2055 143 0 3 chr2 16865120 16865427 -236391156 + AluSx SINE Alu 1 306 -6 183 207 85 110 chr2 16865438 16865520 -236391063 + L2 LINE L2 3038 3117 -155 253 280 0 90 chr2 16866168 16866268 -236390315 - MIR SINE MIR -144 118 28 182 346 20 10 chr2 16866275 16866376 -236390207 + MIR3 SINE MIR 3 104 -104 2564 143 2 10 chr2 16866376 16866769 -236389814 - MLT1B LTR MaLR 0 390 1 1126 221 119 14 chr2 16866771 16867074 -236389509 - MLT1D LTR MaLR -115 390 32 1311 280 79 30 chr2 16867704 16868233 -236388350 - MLT1H1 LTR MaLR 0 555 1 291 341 146 8 chr2 16868555 16868678 -236387905 - L2 LINE L2 0 3272 3133 276 262 115 16 chr2 16868959 16869081 -236387502 - L2 LINE L2 -3 3269 3136 691 245 77 63 chr2 16869118 16869404 -236387179 - L2 LINE L2 -2 3311 3022 289 258 30 15 chr2 16870214 16870280 -236386303 - MIR SINE MIR -159 103 37 2379 101 59 34 chr2 16870367 16870722 -236385861 - THE1B LTR MaLR 0 364 1 339 234 303 59 chr2 16870752 16871191 -236385392 - MLT1H1 LTR MaLR -3 552 1 1815 231 17 3 chr2 16871367 16871727 -236384856 - MLT1A1 LTR MaLR 0 365 1 193 263 35 0 chr2 16871775 16871832 -236384751 - L2 LINE L2 -220 3052 2994 476 323 129 5 chr2 16872789 16873006 -236383577 + MIR SINE MIR 16 259 -3 453 76 0 0 chr2 16873642 16873708 -236382875 + (CA)n Simple_repeat Simple_repeat 1 66 0 23 54 0 0 chr2 16874101 16874138 -236382445 + AT_rich Low_complexity Low_complexity 1 37 0 1620 148 61 25 chr2 16874340 16874617 -236381966 - AluJo SINE Alu -25 287 1 441 303 48 45 chr2 16874618 16874948 -236381635 - L1ME4a LINE L1 -222 5899 5569 545 249 22 61 chr2 16875247 16875428 -236381155 + MIR SINE MIR 13 186 -76 613 148 95 143 chr2 16876616 16876805 -236379778 - MER58C DNA MER1_type 0 215 36 421 257 20 0 chr2 16876829 16876930 -236379653 + MER5A DNA MER1_type 10 112 -77 256 348 67 0 chr2 16877317 16877452 -236379131 + MIR SINE MIR 104 247 -15 1031 239 95 35 chr2 16878124 16878584 -236377999 - L2 LINE L2 -252 3061 2573 274 184 40 40 chr2 16878618 16878694 -236377889 - Charlie7 DNA MER1_type -2490 122 47 226 201 52 178 chr2 16879177 16879351 -236377232 - MER5A DNA MER1_type -1 188 37 216 228 0 0 chr2 16879410 16879467 -236377116 + CT-rich Low_complexity Low_complexity 1 57 0 312 293 28 0 chr2 16879482 16879588 -236376995 - L2 LINE L2 -11 3261 3153 193 362 49 53 chr2 16879874 16880117 -236376466 + L2 LINE L2 3007 3248 -24 1842 244 20 24 chr2 16880529 16880984 -236375599 - MER82 DNA MER2_type 0 653 201 372 275 11 0 chr2 16881467 16881558 -236375025 - MER82 DNA MER2_type -560 93 2 908 186 88 5 chr2 16881606 16881821 -236374762 + MLT1H LTR MaLR 1 233 -316 272 243 9 103 chr2 16881979 16882086 -236374497 + MLT1H LTR MaLR 453 549 0 332 333 27 33 chr2 16882939 16883122 -236373461 + LTR37B LTR ERV1 17 198 -270 1854 236 65 35 chr2 16883681 16884201 -236372382 - MLT1E LTR MaLR -1 592 57 381 328 35 11 chr2 16884316 16884490 -236372093 + L1ME LINE L1 5524 5701 -420 260 282 0 0 chr2 16884608 16884679 -236371904 - L1MC/D LINE L1 -1925 5883 5813 213 154 0 0 chr2 16886376 16886415 -236370168 + (CA)n Simple_repeat Simple_repeat 2 40 0 2837 146 162 9 chr2 16886801 16887351 -236369232 + MER51A LTR ERV1 1 634 0 22 94 0 0 chr2 16888144 16888208 -236368375 + AT_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr2 16888364 16888387 -236368196 + AT_rich Low_complexity Low_complexity 1 23 0 2824 151 44 4 chr2 16888836 16889333 -236367250 - L1MA4A LINE L1 -4 6299 5783 200 125 50 0 chr2 16889350 16889390 -236367193 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 895 112 8 8 chr2 16889431 16889565 -236367018 - L1MA4A LINE L1 -514 5789 5656 299 257 47 41 chr2 16890152 16890323 -236366260 - L2 LINE L2 -629 2685 2514 2165 97 0 0 chr2 16890619 16890942 -236365641 - AluSg SINE Alu 0 323 1 301 274 52 26 chr2 16891037 16891190 -236365393 - MIR SINE MIR -97 165 9 431 298 65 28 chr2 16892108 16892323 -236364260 - MIR SINE MIR 0 262 40 401 282 99 65 chr2 16892560 16893071 -236363512 + L2 LINE L2 2691 3229 -84 25 0 0 0 chr2 16893284 16893309 -236363274 + AT_rich Low_complexity Low_complexity 1 25 0 441 328 16 11 chr2 16893337 16893523 -236363060 + MIR3 SINE MIR 8 194 -14 233 250 65 109 chr2 16895880 16896064 -236360519 + MIR3 SINE MIR 33 208 0 486 215 179 36 chr2 16896475 16896670 -236359913 - MLT1D LTR MaLR -267 238 16 3322 84 9 9 chr2 16896675 16897114 -236359469 + MLT2A1 LTR ERVL 6 444 0 44245 76 13 1 chr2 16897114 16902699 -236353884 + HERVL-A1-A1 LTR ERVL 1 5654 0 3387 78 16 0 chr2 16902701 16903136 -236353447 + MLT2A1 LTR ERVL 3 444 0 193 417 7 0 chr2 16903156 16903295 -236353288 - L2 LINE L2 -904 2410 2271 268 22 22 43 chr2 16903886 16903932 -236352651 + (TTTTTG)n Simple_repeat Simple_repeat 1 45 0 219 303 174 30 chr2 16904015 16904418 -236352165 - L2 LINE L2 -1887 1427 967 389 227 9 0 chr2 16904425 16904535 -236352048 + GA-rich Low_complexity Low_complexity 1 111 0 515 254 150 22 chr2 16904747 16905114 -236351469 - LTR16A1 LTR ERVL 0 457 1 230 350 17 33 chr2 16906162 16906282 -236350301 + MIR SINE MIR 60 177 -85 1146 197 34 88 chr2 16907324 16907633 -236348950 - MLT1B LTR MaLR 0 467 189 2103 131 0 19 chr2 16907633 16907947 -236348636 - AluSc SINE Alu -1 308 1 1146 197 34 88 chr2 16907947 16908127 -236348456 - MLT1B LTR MaLR -278 189 1 286 157 0 0 chr2 16909930 16909981 -236346602 - MLT1A2 LTR MaLR -268 106 56 1369 176 35 24 chr2 16909985 16910274 -236346309 + MLT1A1 LTR MaLR 59 350 -15 545 279 42 6 chr2 16910554 16910719 -236345864 + MER5B DNA MER1_type 8 178 0 363 281 41 8 chr2 16910888 16911009 -236345574 + MIR SINE MIR 25 149 -59 805 261 58 0 chr2 16911024 16911250 -236345333 + MIR SINE MIR 16 254 -8 2253 200 29 2 chr2 16911823 16912238 -236344345 + MSTB LTR MaLR 1 426 0 425 338 26 7 chr2 16913337 16913491 -236343092 + MIR SINE MIR 20 176 -86 * 637 308 49 59 chr2 16913489 16913914 -236342669 + L2 LINE L2 2892 3312 -1 972 201 50 65 chr2 16915908 16916187 -236340396 - ORSL DNA AcHobo 0 275 1 183 256 120 17 chr2 16916190 16916307 -236340276 + L2 LINE L2 3139 3267 -5 363 241 63 90 chr2 16916884 16917091 -236339492 - MIR3 SINE MIR -1 207 2 331 358 73 35 chr2 16918022 16918363 -236338220 + L1MEd LINE L1 6 359 -5760 536 266 110 86 chr2 16918582 16919153 -236337430 + L1MEd LINE L1 564 1148 -4971 363 44 0 0 chr2 16919468 16919513 -236337070 + (TG)n Simple_repeat Simple_repeat 2 46 0 206 196 11 76 chr2 16919530 16919596 -236336987 + GA-rich Low_complexity Low_complexity 3 63 -25 2116 139 0 0 chr2 16919596 16919897 -236336686 + AluSx SINE Alu 5 305 -7 206 196 11 76 chr2 16919897 16919922 -236336661 + GA-rich Low_complexity Low_complexity 63 88 0 685 272 72 60 chr2 16919948 16920349 -236336234 + L1ME3 LINE L1 5544 5949 -213 1971 135 76 22 chr2 16922786 16923142 -236333441 - THE1C LTR MaLR 0 375 1 245 366 36 0 chr2 16924151 16924263 -236332320 - L2 LINE L2 -36 3236 3121 207 321 25 12 chr2 16924293 16924374 -236332209 - MIR SINE MIR -94 114 33 258 176 0 0 chr2 16924534 16924585 -236331998 + GA-rich Low_complexity Low_complexity 2 52 0 253 329 47 22 chr2 16924989 16925132 -236331451 + MIR SINE MIR 9 154 -78 426 320 82 37 chr2 16925288 16925557 -236331026 - L2 LINE L2 -1 3271 2991 252 86 0 0 chr2 16926343 16926378 -236330205 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 35 0 0 chr2 16927335 16927364 -236329219 + AT_rich Low_complexity Low_complexity 1 29 0 327 380 25 0 chr2 16928223 16928386 -236328197 + LTR16C LTR ERVL 71 237 -254 202 325 25 0 chr2 16928460 16928540 -236328043 - L2 LINE L2 -517 2797 2716 2385 102 0 0 chr2 16929004 16929309 -236327274 - AluSc SINE Alu -4 305 1 259 189 306 9 chr2 16929321 16929432 -236327151 + MIR SINE MIR 53 196 -66 1955 129 190 11 chr2 16930012 16930375 -236326208 + MSTA LTR MaLR 1 428 0 5468 143 30 1 chr2 16930437 16931324 -236325259 + L1PA16 LINE L1 5254 6166 0 321 307 35 18 chr2 16931573 16931702 -236324881 - MIR SINE MIR -62 146 37 23 0 0 0 chr2 16932216 16932239 -236324344 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chr2 16932558 16932582 -236324001 + (T)n Simple_repeat Simple_repeat 1 24 0 215 313 0 15 chr2 16933185 16933252 -236323331 + L2 LINE L2 2992 3057 -215 205 195 13 13 chr2 16934545 16934622 -236321961 + (CA)n Simple_repeat Simple_repeat 1 77 0 1130 212 91 74 chr2 16934816 16935236 -236321347 + LTR16A LTR ERVL 17 443 -7 285 281 11 0 chr2 16936583 16936672 -236319911 + (CA)n Simple_repeat Simple_repeat 1 90 0 638 182 8 62 chr2 16937196 16937359 -236319224 + L1MA7 LINE L1 6121 6295 -5 326 321 45 0 chr2 16938286 16938398 -236318185 - MIR SINE MIR -48 214 98 332 313 35 21 chr2 16938719 16938863 -236317720 - L3 LINE CR1 -1 1576 1431 * 836 296 12 28 chr2 16938850 16939103 -236317480 - MIR SINE MIR 0 262 14 528 255 122 32 chr2 16939394 16939582 -236317001 - MIR SINE MIR -13 249 45 1349 311 140 27 chr2 16939733 16940684 -236315899 + L2 LINE L2 1974 3026 -287 516 239 76 66 chr2 16940694 16941096 -236315487 - MLT1G1 LTR MaLR -2 528 107 2047 145 13 41 chr2 16941284 16941677 -236314906 + MLT1B LTR MaLR 1 382 -8 23 0 0 0 chr2 16941698 16941721 -236314862 + AT_rich Low_complexity Low_complexity 1 23 0 2051 151 0 0 chr2 16941933 16942245 -236314338 + AluSx SINE Alu 1 312 0 209 287 39 62 chr2 16942931 16943060 -236313523 - MIR SINE MIR -28 234 109 1780 212 30 30 chr2 16943531 16943961 -236312622 + MER74A LTR ERVL 2 431 -127 1190 203 232 11 chr2 16944440 16944789 -236311794 + MSTB LTR MaLR 1 426 0 292 304 0 0 chr2 16945046 16945125 -236311458 + MIR3 SINE MIR 105 183 -25 1511 283 42 39 chr2 16947201 16948259 -236308324 + L1M4 LINE L1 3920 4980 -1166 355 279 92 71 chr2 16949291 16949725 -236306858 - L1M4 LINE L1 -2660 3486 3044 230 319 120 69 chr2 16949802 16950096 -236306487 + L2 LINE L2 2418 2742 -572 1212 255 30 14 chr2 16950096 16950464 -236306119 + MLT1A2 LTR MaLR 1 374 0 230 319 120 69 chr2 16950464 16950601 -236305982 + L2 LINE L2 2742 2871 -443 207 351 0 13 chr2 16950736 16950813 -236305770 + L2 LINE L2 3237 3312 -1 2208 90 10 7 chr2 16951223 16951522 -236305061 + AluSg SINE Alu 1 300 -10 2255 147 3 13 chr2 16951868 16952243 -236304340 - L1PB3 LINE L1 -2 6152 5782 396 0 0 0 chr2 16952292 16952336 -236304247 + (TA)n Simple_repeat Simple_repeat 2 45 0 3003 119 10 10 chr2 16952336 16952839 -236303744 - L1PB3 LINE L1 -374 5780 5278 23 0 0 0 chr2 16952885 16952908 -236303675 + AT_rich Low_complexity Low_complexity 1 23 0 6612 164 14 27 chr2 16952988 16953995 -236302588 + L1PB3 LINE L1 3750 4768 -1386 2263 138 25 3 chr2 16953995 16954351 -236302232 - THE1B LTR MaLR 0 364 1 6612 164 14 27 chr2 16954351 16954727 -236301856 + L1PB3 LINE L1 4768 5147 -1007 2614 102 3 0 chr2 16954727 16955081 -236301502 - THE1A LTR MaLR 0 355 1 6612 164 14 27 chr2 16955081 16956138 -236300445 + L1PB3 LINE L1 5147 6154 0 22 0 0 0 chr2 16956154 16956176 -236300407 + AT_rich Low_complexity Low_complexity 1 22 0 364 289 123 22 chr2 16956186 16956463 -236300120 + L1M4 LINE L1 3208 3512 -2634 278 277 7 35 chr2 16957501 16957642 -236298941 - L1M4 LINE L1 -1480 4666 4530 311 317 64 70 chr2 16958093 16958339 -236298244 - L1M4 LINE L1 -2219 3927 3682 305 47 23 0 chr2 16958339 16958382 -236298201 + (TG)n Simple_repeat Simple_repeat 1 44 0 311 317 64 70 chr2 16958382 16958447 -236298136 - L1M4 LINE L1 -2464 3682 3618 22 0 0 0 chr2 16958692 16958714 -236297869 + AT_rich Low_complexity Low_complexity 1 22 0 279 51 0 0 chr2 16959135 16959174 -236297409 - L1ME3A LINE L1 -8 6162 6124 356 303 38 57 chr2 16959778 16959989 -236296594 - L1M4 LINE L1 -3612 2534 2328 22 56 0 0 chr2 16960504 16960540 -236296043 + AT_rich Low_complexity Low_complexity 1 36 0 520 364 52 30 chr2 16960646 16961014 -236295569 - HAL1 LINE L1 -757 1750 1375 1723 225 86 45 chr2 16961194 16961790 -236294793 + MLT1E2 LTR MaLR 1 620 -6 2331 92 0 0 chr2 16961959 16962253 -236294330 - AluY SINE Alu -17 294 1 228 318 91 31 chr2 16962320 16962450 -236294133 - MIR SINE MIR -68 140 34 252 288 12 0 chr2 16962884 16962964 -236293619 + MER20 DNA MER1_type 138 218 -1 201 308 13 51 chr2 16963176 16963254 -236293329 - L3 LINE CR1 -111 1466 1392 222 91 0 0 chr2 16963366 16963399 -236293184 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 862 106 7 7 chr2 16965292 16965434 -236291149 + (GAAA)n Simple_repeat Simple_repeat 4 145 0 985 177 0 0 chr2 16966134 16966292 -236290291 - AluJb SINE Alu -22 290 133 263 85 21 0 chr2 16966416 16966463 -236290120 + (TG)n Simple_repeat Simple_repeat 1 48 0 6232 37 0 3 chr2 16968790 16969540 -236287043 + L1PA4 LINE L1 5408 6155 0 192 303 13 0 chr2 16969647 16969723 -236286860 - L3 LINE CR1 -200 1377 1301 371 245 38 9 chr2 16970108 16970214 -236286369 - MIR SINE MIR -75 133 25 393 329 109 73 chr2 16971567 16971918 -236284665 + L1ME LINE L1 41 378 -5741 1930 144 13 17 chr2 16971918 16972217 -236284366 + AluSx SINE Alu 1 298 -14 393 329 109 73 chr2 16972217 16972562 -236284021 + L1ME LINE L1 378 762 -5357 489 317 55 39 chr2 16972617 16973044 -236283539 + L1ME LINE L1 3778 4223 -1906 875 287 5 0 chr2 16973044 16973267 -236283316 - MER58A DNA MER1_type 0 224 1 489 317 55 39 chr2 16973267 16973561 -236283022 + L1ME LINE L1 4223 4511 -1618 186 219 21 10 chr2 16973664 16973760 -236282823 + (TA)n Simple_repeat Simple_repeat 2 98 0 267 86 0 0 chr2 16973825 16973860 -236282723 + U2 snRNA snRNA 1 35 -153 633 313 79 11 chr2 16974004 16974372 -236282211 + L1ME LINE L1 4889 5281 -848 380 295 49 41 chr2 16974433 16974704 -236281879 + L1ME LINE L1 5327 5601 -552 280 138 138 0 chr2 16975073 16975138 -236281445 - MLT1J2 LTR MaLR -312 138 65 221 56 0 28 chr2 16975696 16975732 -236280851 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 299 329 53 48 chr2 16975851 16976058 -236280525 - MIR SINE MIR -43 219 12 641 221 27 17 chr2 16976312 16976484 -236280099 + MIR3 SINE MIR 23 197 -11 416 344 152 23 chr2 16977432 16977827 -236278756 - L2 LINE L2 -347 2967 2522 23 33 0 0 chr2 16977953 16977983 -236278600 + AT_rich Low_complexity Low_complexity 1 30 0 222 264 110 33 chr2 16978332 16978423 -236278160 + MIR SINE MIR 32 129 -79 2654 132 9 21 chr2 16978859 16979291 -236277292 + MSTA LTR MaLR 1 427 -1 231 204 0 0 chr2 16979362 16979406 -236277177 + L2 LINE L2 3265 3308 -5 * 268 341 15 44 chr2 16979404 16979539 -236277044 - MIR SINE MIR -86 176 46 331 347 7 67 chr2 16979990 16980140 -236276443 - L2 LINE L2 0 3272 3132 2925 198 30 24 chr2 16980155 16980431 -236276152 - MER82 DNA MER2_type -22 631 358 2151 107 0 7 chr2 16980431 16980721 -236275862 + AluSc SINE Alu 1 288 -21 2925 198 30 24 chr2 16980721 16981071 -236275512 - MER82 DNA MER2_type -295 358 1 285 378 21 34 chr2 16981137 16981370 -236275213 - L2 LINE L2 -179 3093 2864 183 42 0 0 chr2 16981868 16981892 -236274691 + (CA)n Simple_repeat Simple_repeat 1 24 0 284 331 183 0 chr2 16981937 16982079 -236274504 - MIR SINE MIR -76 186 19 411 21 0 0 chr2 16983586 16983634 -236272949 + (TG)n Simple_repeat Simple_repeat 2 49 0 2249 107 0 3 chr2 16983708 16984007 -236272576 + AluSg SINE Alu 4 301 -9 309 286 124 72 chr2 16985022 16985169 -236271414 - L1M2 LINE L1 -5825 1024 886 318 67 0 0 chr2 16985169 16985214 -236271369 + (CGGGG)n Simple_repeat Simple_repeat 5 49 0 309 286 124 72 chr2 16985214 16985412 -236271171 - L1M2 LINE L1 -5963 886 661 425 279 57 0 chr2 16986980 16987102 -236269481 - MIR SINE MIR -50 212 84 264 240 62 0 chr2 16987755 16987832 -236268751 + MIR SINE MIR 86 152 -56 241 356 67 48 chr2 16988075 16988283 -236268300 - L2 LINE L2 0 3272 3061 403 347 110 23 chr2 16988539 16988758 -236267825 + MIR SINE MIR 1 238 -24 453 292 90 2 chr2 16989144 16989320 -236267263 - MIR SINE MIR -49 213 28 1658 148 30 0 chr2 16989787 16990057 -236266526 - AluJb SINE Alu -8 304 27 330 222 171 34 chr2 16990443 16990560 -236266023 - L2 LINE L2 -2 3270 3138 295 267 44 22 chr2 16990822 16990912 -236265671 + MIR3 SINE MIR 111 202 -6 435 304 65 27 chr2 16991633 16991834 -236264749 - MIR SINE MIR -49 213 6 348 167 20 39 chr2 16992328 16992430 -236264153 + A-rich Low_complexity Low_complexity 1 100 0 295 252 179 53 chr2 16992534 16992685 -236263898 + MIR SINE MIR 32 201 -61 346 193 136 11 chr2 16993121 16993209 -236263374 + MER46C DNA MER2_type 7 105 -233 518 218 57 0 chr2 16993273 16993397 -236263186 + MER46C DNA MER2_type 207 337 -1 208 173 0 19 chr2 16993573 16993625 -236262958 + A-rich Low_complexity Low_complexity 2 52 0 283 245 6 6 chr2 16994760 16994919 -236261664 + (TG)n Simple_repeat Simple_repeat 2 160 0 446 282 58 6 chr2 16995618 16995774 -236260809 + MIR3 SINE MIR 16 179 -29 200 327 75 75 chr2 16996295 16996521 -236260062 - MIR SINE MIR -5 257 32 23 33 0 0 chr2 16996569 16996599 -236259984 + AT_rich Low_complexity Low_complexity 1 30 0 1474 230 59 61 chr2 16997375 16997870 -236258713 - L2 LINE L2 0 3313 2820 255 329 42 36 chr2 16997883 16998050 -236258533 + L2 LINE L2 3081 3248 -24 181 244 289 0 chr2 16999099 16999189 -236257394 - L2 LINE L2 -6 3307 3192 404 278 73 69 chr2 17000900 17001188 -236255395 - MLT1I LTR MaLR -23 386 98 349 296 0 18 chr2 17001321 17001490 -236255093 + (TACTG)n Simple_repeat Simple_repeat 3 168 0 1051 209 88 4 chr2 17001809 17002082 -236254501 + MER2 DNA MER2_type 49 344 -1 242 318 31 62 chr2 17002239 17002368 -236254215 + L2 LINE L2 3189 3313 0 722 207 7 8 chr2 17002933 17003086 -236253497 + MIR SINE MIR 63 213 -49 345 313 62 33 chr2 17003238 17003511 -236253072 - L2 LINE L2 -249 3064 2795 494 35 0 0 chr2 17003892 17003949 -236252634 + ERVL LTR ERVL 2501 2557 -3207 2017 196 58 58 chr2 17003949 17004469 -236252114 - MLT2B1 LTR ERVL 0 520 1 226 288 0 30 chr2 17004915 17004981 -236251602 - MIR3 SINE MIR -41 167 104 313 361 52 13 chr2 17005582 17005737 -236250846 - MIR SINE MIR -12 250 90 301 383 52 7 chr2 17006848 17007002 -236249581 - MIR SINE MIR -12 250 90 251 235 118 15 chr2 17007120 17007188 -236249395 - L2 LINE L2 -5 3267 3193 349 216 0 54 chr2 17007834 17007908 -236248675 - L2 LINE L2 0 3313 3244 242 247 33 20 chr2 17007942 17008092 -236248491 + (TAA)n Simple_repeat Simple_repeat 2 153 0 2459 276 138 12 chr2 17008130 17009253 -236247330 - L2 LINE L2 -160 3153 1901 23 33 0 0 chr2 17011093 17011123 -236245460 + AT_rich Low_complexity Low_complexity 1 30 0 247 244 79 71 chr2 17012132 17012259 -236244324 - MIR SINE MIR -65 197 70 367 272 69 9 chr2 17013162 17013297 -236243286 + MIR3 SINE MIR 15 170 -38 1608 201 19 35 chr2 17013466 17013835 -236242748 - MLT1A1 LTR MaLR 0 365 3 1096 170 0 5 chr2 17014084 17014272 -236242311 - AluJb SINE Alu -6 306 120 229 391 22 17 chr2 17014471 17014650 -236241933 + MIR3 SINE MIR 13 192 -16 228 343 15 0 chr2 17015572 17015639 -236240944 - L2 LINE L2 -1 3271 3204 763 186 96 51 chr2 17015795 17015972 -236240611 - MER20 DNA MER1_type 0 219 35 385 253 110 3 chr2 17015991 17016118 -236240465 - MIR SINE MIR -68 140 24 874 228 10 35 chr2 17016134 17016336 -236240247 + MER63A DNA MER1_type 1 197 -13 191 311 19 19 chr2 17016683 17016786 -236239797 - L2 LINE L2 -964 2350 2248 272 265 48 0 chr2 17016809 17016892 -236239691 + MIR SINE MIR 105 191 -71 346 344 101 16 chr2 17017210 17017399 -236239184 - L2 LINE L2 -516 2798 2594 1066 148 188 64 chr2 17017404 17017677 -236238906 + AluSg SINE Alu 2 305 0 295 283 9 38 chr2 17018598 17018704 -236237879 - MIR SINE MIR -72 136 33 201 196 18 54 chr2 17018923 17018979 -236237604 - MIR3 SINE MIR -144 64 11 219 298 183 29 chr2 17019385 17019489 -236237094 - MIR SINE MIR -30 232 113 244 250 29 128 chr2 17019898 17020070 -236236513 - MIR SINE MIR -61 201 47 440 314 54 54 chr2 17020763 17021021 -236235562 + MIR SINE MIR 4 261 -1 613 250 0 0 chr2 17022379 17022511 -236234072 - MER94 DNA DNA -2 132 1 307 314 151 5 chr2 17022729 17022914 -236233669 + MIR SINE MIR 51 262 0 940 277 22 0 chr2 17023440 17023671 -236232912 + MIR SINE MIR 27 262 0 278 309 118 18 chr2 17024007 17024117 -236232466 + MIR SINE MIR 31 151 -57 186 43 0 0 chr2 17026455 17026478 -236230105 + (GA)n Simple_repeat Simple_repeat 2 24 0 454 274 71 36 chr2 17026811 17026979 -236229604 + MIR3 SINE MIR 35 208 0 402 325 30 54 chr2 17028306 17028509 -236228074 + MIR SINE MIR 5 202 -60 725 297 103 62 chr2 17029053 17029521 -236227062 - L2 LINE L2 0 3313 2827 360 289 82 86 chr2 17029903 17030218 -236226365 - L2 LINE L2 -2 3270 2957 440 302 68 64 chr2 17030917 17031212 -236225371 - L2 LINE L2 -3 3269 2974 246 157 0 20 chr2 17031673 17031724 -236224859 - LTR66 LTR ERVL -171 439 390 317 225 11 0 chr2 17031730 17031819 -236224764 + (TATG)n Simple_repeat Simple_repeat 3 92 0 278 291 136 0 chr2 17032003 17032113 -236224470 - MIR3 SINE MIR -70 138 14 232 364 0 0 chr2 17032300 17032366 -236224217 - L3 LINE CR1 -113 1464 1399 257 248 248 8 chr2 17033127 17033252 -236223331 + MIR3 SINE MIR 33 187 -21 640 306 6 0 chr2 17034165 17034348 -236222235 + MIR SINE MIR 79 262 0 210 239 55 92 chr2 17035400 17035509 -236221074 - MIR3 SINE MIR 0 208 104 192 333 0 0 chr2 17035567 17035624 -236220959 + MIR SINE MIR 189 245 -17 404 203 326 14 chr2 17035828 17035966 -236220617 - MER5A DNA MER1_type 0 189 9 248 304 59 39 chr2 17037538 17037640 -236218943 + MIR SINE MIR 157 260 -2 2491 126 3 3 chr2 17037931 17038295 -236218288 - THE1B LTR MaLR 0 364 1 222 198 49 0 chr2 17038671 17038752 -236217831 + CT-rich Low_complexity Low_complexity 4 88 0 2176 102 0 23 chr2 17039702 17040006 -236216577 - AluSc SINE Alu -12 297 1 202 286 157 14 chr2 17040026 17040096 -236216487 - L2 LINE L2 -38 3234 3155 360 0 0 0 chr2 17040146 17040186 -236216397 + (TA)n Simple_repeat Simple_repeat 2 41 0 381 317 68 16 chr2 17040741 17040990 -236215593 + MIR SINE MIR 1 262 0 401 361 93 19 chr2 17041032 17041353 -236215230 + L3 LINE CR1 916 1260 -317 294 308 0 0 chr2 17041344 17041422 -236215161 - L2 LINE L2 -2 3311 3234 * 273 268 144 0 chr2 17041559 17041656 -236214927 - L2 LINE L2 -340 2973 2863 194 352 0 28 chr2 17041630 17041701 -236214882 - MIR SINE MIR -80 128 60 * 349 333 36 18 chr2 17042349 17042517 -236214066 - MIR SINE MIR -13 249 79 2039 125 3 26 chr2 17043187 17043490 -236213093 + AluSx SINE Alu 1 296 -16 192 365 35 35 chr2 17045398 17045513 -236211070 - MIR SINE MIR -59 149 35 253 329 0 0 chr2 17046063 17046136 -236210447 - Charlie8 DNA MER1_type -2182 235 163 1547 197 14 40 chr2 17046443 17046813 -236209770 - MLT1A1 LTR MaLR 0 365 6 12523 149 30 32 chr2 17047184 17049227 -236207356 + Tigger1 DNA MER2_type 1 2048 -370 1513 197 43 0 chr2 17049227 17049526 -236207057 + AluJb SINE Alu 1 312 0 12523 149 30 32 chr2 17049526 17049735 -236206848 + Tigger1 DNA MER2_type 2048 2249 -169 2162 116 7 0 chr2 17049735 17050027 -236206556 + AluSx SINE Alu 1 294 -18 12523 149 30 32 chr2 17050027 17050197 -236206386 + Tigger1 DNA MER2_type 2249 2418 0 1518 205 22 11 chr2 17050343 17050709 -236205874 - L1MA10 LINE L1 -349 5819 5450 2195 156 70 15 chr2 17050709 17051161 -236205422 + L1MA10 LINE L1 5852 6331 -3 293 262 161 36 chr2 17052480 17052648 -236203935 - MIR SINE MIR -54 208 20 238 259 222 19 chr2 17052682 17052790 -236203793 + MIR3 SINE MIR 73 202 -6 1499 223 122 5 chr2 17052832 17053235 -236203348 - LTR40a LTR ERVL 0 519 70 238 334 158 42 chr2 17053373 17053971 -236202612 - L2 LINE L2 -23 3249 2581 26 0 0 0 chr2 17053971 17053997 -236202586 + AT_rich Low_complexity Low_complexity 1 26 0 644 264 50 88 chr2 17054139 17054400 -236202183 + MIR SINE MIR 12 262 0 26 0 0 0 chr2 17054540 17054566 -236202017 + AT_rich Low_complexity Low_complexity 1 26 0 4806 134 10 11 chr2 17054566 17055369 -236201214 - L1PA15 LINE L1 -3 6162 5361 180 268 54 0 chr2 17055757 17055813 -236200770 + MIR SINE MIR 74 132 -130 255 177 42 42 chr2 17056987 17057083 -236199500 - L1M4 LINE L1 -410 5774 5679 3049 217 29 34 chr2 17057309 17058437 -236198146 - L1M4 LINE L1 -469 5705 4579 1880 141 40 45 chr2 17058437 17058814 -236197769 - THE1C LTR MaLR 0 375 1 3049 217 29 34 chr2 17058814 17059035 -236197548 - L1M4 LINE L1 -1595 4579 4358 * 6191 205 17 22 chr2 17059033 17059085 -236197498 - L1MC1 LINE L1 -1 6332 6281 2361 21 11 4 chr2 17059085 17059365 -236197218 + AluY SINE Alu 17 298 -13 6191 205 17 22 chr2 17059365 17060321 -236196262 - L1MC1 LINE L1 -52 6281 5321 470 160 59 0 chr2 17060321 17060440 -236196143 - L1MA5 LINE L1 -4 6296 6171 6191 205 17 22 chr2 17060440 17062332 -236194251 - L1MC1 LINE L1 -1012 5321 3443 3861 209 30 13 chr2 17062335 17062657 -236193926 - L1M4 LINE L1 -377 6299 5984 4024 142 14 1 chr2 17062657 17063325 -236193258 - L1PA15 LINE L1 -6 6159 5484 1575 36 20 0 chr2 17063331 17063527 -236193056 - L1PA4 LINE L1 0 6155 5956 3861 209 30 13 chr2 17063527 17064499 -236192084 - L1M4 LINE L1 -696 5980 4974 891 231 4 19 chr2 17064503 17064759 -236191824 + L1P LINE L1 4202 4453 -1693 9794 164 22 9 chr2 17064772 17066605 -236189978 - Tigger1 DNA MER2_type -562 1856 1 4501 258 78 52 chr2 17066610 17069767 -236186816 - L1M4c LINE L1 -3291 3353 1 21 0 0 0 chr2 17070443 17070464 -236186119 + AT_rich Low_complexity Low_complexity 1 21 0 197 216 0 0 chr2 17071043 17071080 -236185503 + L3 LINE CR1 1535 1571 -6 2198 130 7 0 chr2 17071196 17071495 -236185088 - AluSx SINE Alu -11 301 1 8675 134 33 14 chr2 17071496 17072978 -236183605 - THE1C-int LTR MaLR -70 1510 1 1030 122 70 52 chr2 17072984 17073213 -236183370 - THE1C LTR MaLR -5 370 138 294 219 0 0 chr2 17073214 17073278 -236183305 - L1PB4 LINE L1 -55 6101 6038 242 359 132 0 chr2 17073280 17073447 -236183136 + L2 LINE L2 2860 3048 -265 1133 312 147 35 chr2 17073766 17074249 -236182334 + L2 LINE L2 1797 2225 -1088 2171 145 3 0 chr2 17074249 17074553 -236182030 - AluSx SINE Alu -7 305 1 1133 312 147 35 chr2 17074553 17075421 -236181162 + L2 LINE L2 2225 3313 0 361 282 145 0 chr2 17075881 17075998 -236180585 - L2 LINE L2 0 3313 3180 1109 306 63 27 chr2 17076037 17076482 -236180101 - L2 LINE L2 0 3313 2853 425 326 94 56 chr2 17076498 17076838 -236179745 + L2 LINE L2 2820 3172 -100 180 183 14 28 chr2 17076872 17076943 -236179640 + GA-rich Low_complexity Low_complexity 2 71 0 350 153 0 47 chr2 17077479 17077564 -236179019 - L1PA11 LINE L1 0 6174 6094 2203 95 3 0 chr2 17078741 17079037 -236177546 - AluY SINE Alu -14 297 1 374 297 81 39 chr2 17079735 17080633 -236175950 + L1MC4a LINE L1 4109 5048 -1098 1823 250 118 42 chr2 17080809 17081193 -236175390 + L1MC4a LINE L1 5254 5608 -2200 2304 109 0 0 chr2 17081193 17081504 -236175079 + AluSq SINE Alu 1 311 -2 1823 250 118 42 chr2 17081504 17082060 -236174523 + L1MC4a LINE L1 5608 6265 -1543 414 335 28 6 chr2 17082418 17082594 -236173989 + MIR SINE MIR 14 193 -69 248 348 26 0 chr2 17082648 17082763 -236173820 + L2 LINE L2 3196 3313 0 270 454 27 6 chr2 17083907 17084090 -236172493 + MIR3 SINE MIR 5 191 -17 448 234 28 48 chr2 17084133 17084278 -236172305 - MIR3 SINE MIR -48 160 19 22 70 0 0 chr2 17084413 17084456 -236172127 + AT_rich Low_complexity Low_complexity 1 43 0 349 274 34 26 chr2 17084562 17084679 -236171904 + MIR SINE MIR 109 226 -36 198 211 0 19 chr2 17084694 17084746 -236171837 - MIR SINE MIR -107 155 105 377 364 29 12 chr2 17084828 17085001 -236171582 + MIR SINE MIR 13 188 -74 2159 133 96 20 chr2 17085661 17086059 -236170524 - MSTA LTR MaLR 0 428 1 285 332 216 29 chr2 17086453 17086763 -236169820 + L3 LINE CR1 438 805 -772 610 256 6 0 chr2 17086963 17087135 -236169448 + MER119 DNA MER1_type 106 278 -305 249 333 220 0 chr2 17087519 17087669 -236168914 + L2 LINE L2 2913 3095 -218 1781 161 39 0 chr2 17087715 17088045 -236168538 - L1MC2 LINE L1 -5 6339 5997 2402 164 30 7 chr2 17088047 17088509 -236168074 - L1MC2 LINE L1 -408 5936 5464 203 205 0 0 chr2 17089545 17089584 -236166999 + MIR SINE MIR 66 104 -104 268 353 23 23 chr2 17090687 17090820 -236165763 - MIR3 SINE MIR -11 197 65 222 37 0 0 chr2 17091065 17091092 -236165491 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 293 350 29 21 chr2 17091966 17092106 -236164477 - MIR SINE MIR -108 154 14 1466 196 16 57 chr2 17092656 17093044 -236163539 + MLT1A2 LTR MaLR 1 372 -2 1678 180 9 25 chr2 17093901 17094218 -236162365 - AluJo SINE Alu 0 312 1 562 225 107 24 chr2 17095323 17095612 -236160971 + HsTC2 DNA Tc2 1579 1891 -7 278 332 97 10 chr2 17095749 17096038 -236160545 + L1 LINE L1 3625 3938 -2208 373 315 150 31 chr2 17096397 17096657 -236159926 - L2 LINE L2 0 3313 3023 230 271 58 37 chr2 17096729 17096917 -236159666 + L1 LINE L1 4371 4562 -1584 1846 174 14 20 chr2 17096934 17097278 -236159305 + MER61A LTR ERV1 2 343 0 270 343 27 20 chr2 17097361 17097507 -236159076 - L2 LINE L2 -924 2390 2244 331 178 0 55 chr2 17098238 17098311 -236158272 + MER76 LTR ERV 1 69 -619 323 182 13 0 chr2 17099586 17099663 -236156920 + GA-rich Low_complexity Low_complexity 3 80 0 192 400 0 0 chr2 17100152 17100217 -236156366 - MIR SINE MIR -106 102 38 32 0 0 0 chr2 17100390 17100422 -236156161 + AT_rich Low_complexity Low_complexity 1 32 0 26 0 0 0 chr2 17100676 17100702 -236155881 + AT_rich Low_complexity Low_complexity 1 26 0 1011 276 19 91 chr2 17101223 17101684 -236154899 + L1ME LINE L1 132 559 -5837 297 280 86 33 chr2 17101852 17102281 -236154302 + L1ME LINE L1 3597 4048 -2167 1081 171 21 28 chr2 17102304 17102716 -236153867 - MLT1D LTR MaLR 0 505 6 216 0 0 0 chr2 17102752 17102776 -236153807 + (TC)n Simple_repeat Simple_repeat 2 25 0 218 103 0 26 chr2 17102776 17102815 -236153768 + (TA)n Simple_repeat Simple_repeat 2 39 0 439 309 101 42 chr2 17102863 17103338 -236153245 + L1ME LINE L1 4168 4670 -1545 1942 152 3 0 chr2 17103626 17103922 -236152661 + AluSx SINE Alu 1 297 -15 27 0 0 0 chr2 17104183 17104210 -236152373 + AT_rich Low_complexity Low_complexity 1 27 0 288 257 30 10 chr2 17104370 17104471 -236152112 + L1MC5 LINE L1 7808 7910 -51 2375 90 3 0 chr2 17105129 17105429 -236151154 - AluSc SINE Alu -8 301 1 329 252 40 80 chr2 17105694 17105786 -236150797 + L1ME LINE L1 5333 5418 -2459 7497 31 2 0 chr2 17105786 17106874 -236149709 + L1PA3 LINE L1 5066 6155 0 329 252 40 80 chr2 17106874 17106932 -236149651 + L1ME LINE L1 5418 5477 -2400 234 269 23 8 chr2 17107151 17107281 -236149302 + L1ME LINE L1 5763 5894 -296 344 240 210 0 chr2 17107657 17107757 -236148826 - L2 LINE L2 -8 3305 3185 21 36 0 0 chr2 17108259 17108287 -236148296 + AT_rich Low_complexity Low_complexity 1 28 0 459 282 84 15 chr2 17109265 17109538 -236147045 - L1ME3A LINE L1 -104 6066 5775 1623 189 93 31 chr2 17109538 17110066 -236146517 - MLT2A2 LTR ERVL 0 554 1 9164 124 42 47 chr2 17110067 17111656 -236144927 + THE1B-int LTR MaLR 1 1580 0 2582 102 14 11 chr2 17111656 17112019 -236144564 + THE1B LTR MaLR 1 364 0 845 262 58 9 chr2 17112019 17112480 -236144103 - L1ME3A LINE L1 -391 5779 5266 1704 221 20 6 chr2 17112612 17112969 -236143614 + MLT1A2 LTR MaLR 2 363 -11 2421 225 19 21 chr2 17112980 17113606 -236142977 + MLT1A2-int LTR MaLR 1 625 -1110 1881 226 11 20 chr2 17114032 17114470 -236142113 + MLT1A2-int LTR MaLR 1302 1735 0 1321 191 55 76 chr2 17114470 17114852 -236141731 + MLT1A2 LTR MaLR 1 374 0 287 238 228 0 chr2 17114973 17115074 -236141509 - MER5C DNA MER1_type -200 124 1 1029 184 35 4 chr2 17115128 17115384 -236141199 - Charlie5 DNA MER1_type -87 2525 2262 280 158 26 66 chr2 17115392 17115468 -236141115 - Charlie5 DNA MER1_type -2513 99 27 719 138 0 21 chr2 17115469 17115614 -236140969 + L1P LINE L1 4600 4741 -1405 222 345 34 14 chr2 17116114 17116262 -236140321 + MIR SINE MIR 99 249 -13 2082 146 3 0 chr2 17117490 17117799 -236138784 - AluSg SINE Alu 0 310 1 2570 119 3 11 chr2 17118121 17118498 -236138085 + THE1C LTR MaLR 2 375 0 9454 136 24 31 chr2 17118498 17120090 -236136493 + THE1C-int LTR MaLR 1 1580 0 2156 93 10 13 chr2 17120090 17120401 -236136182 + THE1C LTR MaLR 1 310 -65 1158 171 4 80 chr2 17120394 17120669 -236135914 - MER7A DNA MER2_type -94 252 1 * 236 294 28 28 chr2 17120669 17120778 -236135805 - MIR SINE MIR -2 260 152 348 301 187 0 chr2 17120786 17120909 -236135674 - MER5A DNA MER1_type -8 181 36 430 317 0 28 chr2 17120926 17121068 -236135515 - MIR SINE MIR -90 172 35 511 343 42 13 chr2 17121722 17121961 -236134622 - MIR SINE MIR -5 257 12 2249 100 10 3 chr2 17122803 17123103 -236133480 - AluSq SINE Alu -11 302 1 21 0 0 0 chr2 17123395 17123416 -236133167 + AT_rich Low_complexity Low_complexity 1 21 0 234 378 36 69 chr2 17124373 17124942 -236131641 + L2 LINE L2 2660 3271 -1 215 186 23 0 chr2 17126027 17126070 -236130513 + A-rich Low_complexity Low_complexity 3 46 0 24 67 0 0 chr2 17126190 17126235 -236130348 + AT_rich Low_complexity Low_complexity 1 45 0 1915 149 48 107 chr2 17126406 17126902 -236129681 + MLT1C LTR MaLR 1 467 0 5682 149 21 12 chr2 17126902 17127929 -236128654 - Tigger1 DNA MER2_type -2 2416 1380 1084 128 55 66 chr2 17127919 17127961 -236128622 - Tigger1 DNA MER2_type -2164 254 213 * 1567 189 50 4 chr2 17127961 17128265 -236128318 + AluJb SINE Alu 1 317 0 1084 128 55 66 chr2 17128265 17128477 -236128106 - Tigger1 DNA MER2_type -2205 213 1 641 239 19 19 chr2 17128888 17128951 -236127632 - MER20 DNA MER1_type 0 219 157 549 0 0 0 chr2 17128951 17129012 -236127571 + (CA)n Simple_repeat Simple_repeat 1 61 0 641 239 19 19 chr2 17129012 17129107 -236127476 - MER20 DNA MER1_type -61 158 61 1438 184 125 33 chr2 17129396 17129917 -236126666 - MLT2A2 LTR ERVL 0 554 1 346 272 144 17 chr2 17131692 17131865 -236124718 - MIR SINE MIR -60 202 8 202 351 11 21 chr2 17132013 17132107 -236124476 - MIR SINE MIR -156 106 14 1374 179 120 99 chr2 17132171 17132566 -236124017 + MLT2B1 LTR ERVL 1 409 -111 2264 100 7 0 chr2 17132566 17132857 -236123726 + AluSp SINE Alu 1 293 -20 1374 179 120 99 chr2 17132857 17132936 -236123647 + MLT2B1 LTR ERVL 409 485 -35 2519 137 11 48 chr2 17133046 17133485 -236123098 + MSTB LTR MaLR 4 426 0 288 0 0 0 chr2 17133506 17133538 -236123045 + (CA)n Simple_repeat Simple_repeat 1 32 0 3471 248 58 72 chr2 17134185 17136662 -236119921 - L1ME1 LINE L1 -3 6163 3730 1449 59 5 0 chr2 17136662 17136849 -236119734 - L1PA5 LINE L1 0 6154 5967 3471 248 58 72 chr2 17136849 17137365 -236119218 - L1ME1 LINE L1 -2436 3730 3208 1563 127 17 4 chr2 17137381 17137617 -236118966 - AluSx SINE Alu -12 300 62 300 213 43 0 chr2 17137617 17137701 -236118882 - L1M4 LINE L1 -1416 4730 4640 533 114 0 0 chr2 17137704 17137783 -236118800 - AluSx SINE Alu -233 79 1 728 319 16 40 chr2 17137973 17138224 -236118359 + MIR SINE MIR 16 260 -2 213 94 0 0 chr2 17138435 17138467 -236118116 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1973 129 7 0 chr2 17138471 17138750 -236117833 - AluSx SINE Alu -31 281 1 2351 268 107 24 chr2 17140538 17140858 -236115725 - L2 LINE L2 -26 3287 2995 1687 184 33 6 chr2 17140858 17141195 -236115388 + L1PA16 LINE L1 5821 6166 0 2351 268 107 24 chr2 17141195 17141935 -236114648 - L2 LINE L2 -318 2995 2151 435 181 101 14 chr2 17141997 17142135 -236114448 - MER5C DNA MER1_type -48 276 127 1219 106 35 26 chr2 17142667 17142894 -236113689 - L1MA9 LINE L1 0 6312 6084 476 227 8 34 chr2 17143130 17143249 -236113334 - MER5C DNA MER1_type -196 128 13 443 270 203 22 chr2 17143348 17143570 -236113013 - L2 LINE L2 -1162 2152 1891 195 42 0 0 chr2 17144023 17144047 -236112536 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2247 115 0 3 chr2 17144054 17144410 -236112173 - AluSx SINE Alu 0 355 1 207 319 125 0 chr2 17146504 17146576 -236110007 - L2 LINE L2 -5 3267 3187 511 309 126 50 chr2 17147334 17147939 -236108644 - L2 LINE L2 -440 2874 2224 25 0 0 0 chr2 17149099 17149124 -236107459 + AT_rich Low_complexity Low_complexity 1 25 0 807 135 11 34 chr2 17149731 17149909 -236106674 - L1MA8 LINE L1 0 6291 6118 1756 223 6 11 chr2 17150887 17151250 -236105333 - MLT1A1 LTR MaLR -2 363 3 363 296 72 0 chr2 17151577 17151702 -236104881 + L2 LINE L2 3180 3313 0 646 324 28 47 chr2 17152222 17152475 -236104108 - MIR SINE MIR 0 262 15 427 254 192 6 chr2 17153394 17153571 -236103012 - L1MC5 LINE L1 -728 7233 7024 285 265 60 0 chr2 17154381 17154464 -236102119 + MIR SINE MIR 123 210 -52 317 175 32 0 chr2 17155185 17155248 -236101335 - MER94 DNA DNA -45 89 25 396 167 0 0 chr2 17155892 17155964 -236100619 + (CA)n Simple_repeat Simple_repeat 1 72 0 676 295 5 36 chr2 17156249 17156442 -236100141 + MER20 DNA MER1_type 28 214 -5 333 329 68 81 chr2 17156847 17157416 -236099167 + L1MC4a LINE L1 6119 6680 -1128 399 286 48 5 chr2 17157648 17157837 -236098746 + L1M4 LINE L1 2320 2516 -3630 2072 253 52 11 chr2 17157987 17158703 -236097880 - L1M4 LINE L1 -1857 4289 3545 341 274 0 0 chr2 17158741 17158836 -236097747 - L1M4 LINE L1 -2740 3406 3312 207 0 0 0 chr2 17159180 17159203 -236097380 + (TAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr2 17159839 17159860 -236096723 + AT_rich Low_complexity Low_complexity 1 21 0 245 220 34 0 chr2 17159879 17159938 -236096645 - L1ME LINE L1 -280 5841 5781 1645 96 42 27 chr2 17162045 17162306 -236094277 + AluY SINE Alu 36 300 -11 473 369 5 0 chr2 17162401 17162588 -236093995 + MIR SINE MIR 65 252 -10 826 145 24 92 chr2 17162946 17163153 -236093430 - 7SK RNA RNA 0 193 1 3471 123 63 22 chr2 17163257 17163844 -236092739 - LTR36 LTR ERV1 0 611 1 421 343 45 0 chr2 17164600 17164778 -236091805 + MIR SINE MIR 23 208 -54 318 243 0 0 chr2 17164820 17164890 -236091693 + MIR SINE MIR 81 150 -112 284 333 36 30 chr2 17165386 17165551 -236091032 + L2 LINE L2 2208 2373 -941 381 282 19 45 chr2 17165874 17166052 -236090531 + MIR SINE MIR 42 208 -54 569 326 84 45 chr2 17166120 17166679 -236089904 + L2 LINE L2 1465 2045 -1269 256 185 46 0 chr2 17167335 17167400 -236089183 - L1ME1 LINE L1 -7 6954 6887 1466 230 21 12 chr2 17167452 17167787 -236088796 - L1ME1 LINE L1 -79 6882 6545 1148 248 25 89 chr2 17167806 17168323 -236088260 + MLT1D LTR MaLR 22 505 0 1118 241 136 50 chr2 17168323 17168780 -236087803 - L1ME1 LINE L1 -410 6551 6056 1417 220 46 76 chr2 17168782 17169359 -236087224 - MLT1E3 LTR MaLR -2 622 1 1358 228 21 75 chr2 17169359 17169828 -236086755 - L1ME1 LINE L1 -881 6060 5617 300 252 84 7 chr2 17169823 17169966 -236086617 + L1M4 LINE L1 2836 2989 -3157 * 1745 32 0 0 chr2 17170035 17170251 -236086332 - L1PA4 LINE L1 -914 5232 5017 7018 34 19 35 chr2 17170251 17171196 -236085387 + L1PA4 LINE L1 5223 6152 -3 2929 272 76 26 chr2 17171243 17172655 -236083928 + L1M4 LINE L1 3073 4554 -1592 300 250 42 0 chr2 17172652 17172748 -236083835 - L1ME1 LINE L1 -3663 3278 3179 * 1317 276 64 29 chr2 17172852 17173481 -236083102 + MER49 LTR ERV1 94 923 0 1097 282 65 45 chr2 17173482 17173664 -236082919 - L1ME1 LINE L1 -4136 2986 2809 2526 71 0 3 chr2 17173664 17173973 -236082610 - AluY SINE Alu -3 308 1 1097 282 65 45 chr2 17173973 17174549 -236082034 - L1ME1 LINE L1 -4313 2809 2213 381 186 24 0 chr2 17174551 17174675 -236081908 + (TA)n Simple_repeat Simple_repeat 2 128 0 1213 241 47 39 chr2 17174709 17175474 -236081109 - L1ME1 LINE L1 -4891 1532 1218 388 297 113 21 chr2 17175561 17175888 -236080695 - L1ME1 LINE L1 -6056 367 11 27 49 0 0 chr2 17176961 17177002 -236079581 + AT_rich Low_complexity Low_complexity 1 41 0 236 169 15 46 chr2 17177516 17177581 -236079002 - HAL1b LINE L1 -535 813 751 1931 151 3 0 chr2 17178303 17178614 -236077969 + AluSx SINE Alu 1 312 0 941 193 22 37 chr2 17178866 17179242 -236077341 - MER4C LTR ERV1 0 695 149 646 152 12 109 chr2 17179317 17179397 -236077186 - MER4C LTR ERV1 -316 149 92 202 28 28 28 chr2 17179397 17179433 -236077150 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 646 152 12 109 chr2 17179433 17179517 -236077066 - MER4C LTR ERV1 -373 92 1 576 246 80 6 chr2 17179746 17179921 -236076662 + L1MCa LINE L1 7 194 -6232 758 187 97 87 chr2 17179921 17180231 -236076352 - LTR48 LTR ERV1 0 787 475 2486 138 44 50 chr2 17180364 17180864 -236075719 + L1MC2 LINE L1 5833 6329 -15 2853 254 107 44 chr2 17180990 17183178 -236073405 + L1M4 LINE L1 2262 4619 -1527 1455 141 52 19 chr2 17183192 17183462 -236073121 - Tigger7 DNA MER2_type -1 2586 2308 370 250 12 0 chr2 17183465 17183545 -236073038 - Tigger7 DNA MER2_type -380 170 90 2563 126 40 75 chr2 17183551 17183898 -236072685 - L1PA16 LINE L1 -9 6157 5830 426 39 0 0 chr2 17183898 17183950 -236072633 + (TG)n Simple_repeat Simple_repeat 2 53 0 2563 126 40 75 chr2 17183950 17184096 -236072487 - L1PA16 LINE L1 -336 5830 5681 815 214 21 31 chr2 17184101 17184293 -236072290 + L1P LINE L1 4833 5022 -1124 582 162 9 9 chr2 17184294 17184399 -236072184 - Tigger7 DNA MER2_type -620 113 9 1247 271 40 4 chr2 17184410 17184863 -236071720 + L1M4 LINE L1 4639 5107 -1039 299 294 50 25 chr2 17185050 17185169 -236071414 - L2 LINE L2 0 3313 3192 2093 93 20 3 chr2 17186769 17187069 -236069514 - AluSq SINE Alu -8 305 1 310 316 115 0 chr2 17188495 17188634 -236067949 - MIR SINE MIR -6 256 102 401 382 51 0 chr2 17189025 17189203 -236067380 - L2 LINE L2 0 3272 3086 231 181 24 24 chr2 17190523 17190606 -236065977 + (TATATG)n Simple_repeat Simple_repeat 4 86 0 2283 104 0 0 chr2 17191284 17191583 -236065000 - AluSx SINE Alu -13 299 1 2948 112 73 20 chr2 17191780 17192270 -236064313 - MER1A DNA MER1_type -13 516 1 27 62 0 0 chr2 17192398 17192446 -236064137 + AT_rich Low_complexity Low_complexity 1 48 0 269 253 0 13 chr2 17192495 17192570 -236064013 + (TG)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr2 17192592 17192620 -236063963 + AT_rich Low_complexity Low_complexity 1 28 0 7161 49 5 2 chr2 17192640 17193623 -236062960 + L1PA5 LINE L1 5163 6148 -6 285 314 95 0 chr2 17193871 17193976 -236062607 + MIR SINE MIR 128 242 -20 2248 82 0 0 chr2 17194126 17194419 -236062164 + AluY SINE Alu 2 294 -17 1984 131 3 14 chr2 17195300 17195430 -236061153 + AluSx SINE Alu 1 131 -181 423 0 0 0 chr2 17195430 17195477 -236061106 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1984 131 3 14 chr2 17195477 17195637 -236060946 + AluSx SINE Alu 131 288 -24 222 323 108 0 chr2 17195907 17196000 -236060583 + L2 LINE L2 3170 3272 0 388 313 21 28 chr2 17196048 17196192 -236060391 - MIR3 SINE MIR 0 208 66 205 350 50 12 chr2 17196467 17196547 -236060036 - MIR SINE MIR -109 99 17 2389 80 7 0 chr2 17196591 17196892 -236059691 + AluSc SINE Alu 1 303 -6 276 292 92 17 chr2 17197046 17197166 -236059417 - L2 LINE L2 -1 3312 3184 553 304 70 10 chr2 17201890 17202091 -236054492 - MIR SINE MIR -41 221 9 275 250 125 25 chr2 17202407 17202487 -236054096 + L2 LINE L2 3185 3272 0 23 0 0 0 chr2 17202860 17202883 -236053700 + AT_rich Low_complexity Low_complexity 1 23 0 392 336 93 22 chr2 17203381 17203607 -236052976 - MIR SINE MIR -2 260 19 1682 221 100 18 chr2 17204081 17204743 -236051840 - L1M4 LINE L1 -2896 3250 2535 741 219 6 0 chr2 17204752 17204921 -236051662 - L1MB7 LINE L1 -19 6165 5996 5501 55 25 1 chr2 17205270 17206004 -236050579 - L1PA7 LINE L1 -3 6151 5401 356 318 121 20 chr2 17206513 17206711 -236049872 - L3b LINE CR1 -227 1356 1139 183 356 58 0 chr2 17206808 17206895 -236049688 - MIR SINE MIR -122 140 49 692 207 29 23 chr2 17206895 17207069 -236049514 + MER5B DNA MER1_type 4 178 0 3471 164 17 5 chr2 17207075 17207735 -236048848 + L1PA13 LINE L1 4486 5153 -993 4703 125 6 31 chr2 17207766 17208600 -236047983 + L1PA13 LINE L1 5347 6159 -4 406 238 158 67 chr2 17208615 17208779 -236047804 - MER5A DNA MER1_type -1 188 10 684 297 8 1 chr2 17208798 17208975 -236047608 + MER5B DNA MER1_type 1 189 0 385 355 20 0 chr2 17209190 17209342 -236047241 + L3 LINE CR1 1255 1409 -168 889 289 76 65 chr2 17209415 17210113 -236046470 + L2 LINE L2 2457 3172 -141 522 279 8 0 chr2 17210102 17210224 -236046359 - L2 LINE L2 0 3313 3191 * 286 278 42 68 chr2 17210228 17210419 -236046164 + L2 LINE L2 3128 3313 0 589 233 92 18 chr2 17210547 17210649 -236045934 + MER5A DNA MER1_type 10 130 -59 1006 179 0 18 chr2 17210649 17210817 -236045766 - FAM SINE Alu -9 166 2 589 233 92 18 chr2 17210817 17210877 -236045706 + MER5A DNA MER1_type 130 184 -5 212 246 46 0 chr2 17210884 17210949 -236045634 - MIR3 SINE MIR -51 157 90 407 305 73 13 chr2 17211974 17212125 -236044458 + MIR SINE MIR 12 171 -91 208 284 91 2 chr2 17212630 17212711 -236043872 + MER5B DNA MER1_type 86 183 -6 586 340 47 13 chr2 17213248 17213483 -236043100 - MIR SINE MIR 0 262 20 201 229 0 0 chr2 17213755 17213803 -236042780 + CT-rich Low_complexity Low_complexity 4 51 0 338 353 191 13 chr2 17213885 17214188 -236042395 + L2 LINE L2 2897 3253 -19 2168 162 45 38 chr2 17215222 17215647 -236040936 - MSTA LTR MaLR 0 428 1 328 339 48 58 chr2 17215652 17215841 -236040742 + L2 LINE L2 3125 3311 -2 215 77 51 51 chr2 17215864 17215903 -236040680 - MIR SINE MIR -106 156 118 191 369 0 0 chr2 17216653 17216718 -236039865 - L2 LINE L2 -62 3210 3146 221 322 0 0 chr2 17217362 17217421 -236039162 - L2 LINE L2 -51 3221 3163 492 321 71 19 chr2 17217617 17217829 -236038754 - MIR SINE MIR -28 234 12 619 200 36 6 chr2 17219105 17219270 -236037313 + L1ME3 LINE L1 5786 5955 -207 211 263 145 0 chr2 17219361 17219437 -236037146 + L2 LINE L2 2935 3021 -251 2457 71 0 0 chr2 17219619 17219915 -236036668 - AluY SINE Alu -15 296 1 220 333 83 0 chr2 17220800 17220896 -236035687 + MIR SINE MIR 51 133 -75 456 312 91 74 chr2 17221642 17221995 -236034588 - L2 LINE L2 0 3272 2914 4320 181 25 22 chr2 17222888 17223857 -236032726 + L1MA9 LINE L1 5341 6312 0 1061 273 52 9 chr2 17224545 17225043 -236031540 + MER69 DNA AcHobo 8 568 -658 638 236 239 14 chr2 17225031 17225458 -236031125 + MER69 DNA AcHobo 2000 2522 -4 * 204 301 12 36 chr2 17226684 17226767 -236029816 + MIR SINE MIR 54 134 -74 437 201 65 26 chr2 17226921 17227075 -236029508 - MER103 DNA DNA -4 162 3 438 88 0 0 chr2 17227760 17227828 -236028755 + (TGGA)n Simple_repeat Simple_repeat 2 69 0 191 284 30 0 chr2 17228048 17228115 -236028468 - L2 LINE L2 -73 3240 3172 288 363 79 46 chr2 17228815 17229184 -236027399 - L2 LINE L2 -663 2651 2271 251 324 19 0 chr2 17229278 17229383 -236027200 - MIR SINE MIR -10 252 146 647 270 157 22 chr2 17229390 17229620 -236026963 + MIR SINE MIR 2 262 0 256 291 10 29 chr2 17229600 17229703 -236026880 - MIR SINE MIR -93 169 69 * 227 386 26 33 chr2 17230894 17231047 -236025536 + MIR3 SINE MIR 52 203 -5 251 0 59 0 chr2 17231623 17231657 -236024926 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2247 109 0 0 chr2 17231738 17232040 -236024543 + AluSx SINE Alu 3 304 -8 192 256 0 0 chr2 17232210 17232253 -236024330 + L2 LINE L2 3262 3304 -9 2572 144 86 46 chr2 17233182 17233878 -236022705 + pTR5 LTR ERV1 743 1466 -972 3857 112 108 101 chr2 17234302 17235687 -236020896 + pTR5 LTR ERV1 66 2438 0 314 339 188 14 chr2 17235924 17236254 -236020329 + L2 LINE L2 2716 3090 -182 21 57 0 0 chr2 17237290 17237325 -236019258 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr2 17238425 17238462 -236018121 + AT_rich Low_complexity Low_complexity 1 37 0 195 364 64 69 chr2 17240968 17241405 -236015178 - L2 LINE L2 -14 3258 2824 546 153 14 10 chr2 17241447 17241740 -236014843 + (TA)n Simple_repeat Simple_repeat 1 294 0 343 37 19 19 chr2 17243207 17243261 -236013322 + (TG)n Simple_repeat Simple_repeat 2 55 0 316 183 19 77 chr2 17243264 17243368 -236013215 - LTR50 LTR ERVL -3 792 695 445 211 46 11 chr2 17243636 17243745 -236012838 - MLT1E1 LTR MaLR -128 509 347 345 246 140 9 chr2 17243775 17243889 -236012694 - MLT1E1 LTR MaLR -349 277 149 1856 194 7 65 chr2 17243997 17244415 -236012168 - MSTD LTR MaLR -2 394 1 908 205 82 61 chr2 17245031 17245324 -236011259 + MLT1E2 LTR MaLR 1 299 -327 652 243 24 12 chr2 17245346 17245515 -236011068 + MLT1E2 LTR MaLR 402 572 -52 1532 121 8 4 chr2 17245515 17245764 -236010819 - L1PA6 LINE L1 0 6154 5905 5241 48 3 12 chr2 17245868 17246875 -236009708 - L1PA6 LINE L1 -245 5909 4912 254 173 0 120 chr2 17246877 17246952 -236009631 + MLT1E2 LTR MaLR 559 624 0 219 88 0 0 chr2 17247089 17247123 -236009460 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 290 359 23 16 chr2 17248054 17248182 -236008401 + MIR SINE MIR 12 140 -122 280 303 22 34 chr2 17248487 17248576 -236008007 + L2 LINE L2 3185 3272 0 528 239 50 70 chr2 17249167 17249368 -236007215 - MLT1D LTR MaLR -286 219 23 2394 251 45 20 chr2 17249406 17250210 -236006373 + L1ME3A LINE L1 3611 4434 -1712 11903 200 45 20 chr2 17250249 17251016 -236005567 - L1MA9 LINE L1 -256 7077 6330 198 0 0 0 chr2 17251016 17251038 -236005545 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 11903 200 45 20 chr2 17251038 17251267 -236005316 - L1MA9 LINE L1 -1003 6330 6108 2583 40 0 0 chr2 17251267 17251566 -236005017 + AluY SINE Alu 1 299 -12 11903 200 45 20 chr2 17251566 17254284 -236002299 - L1MA9 LINE L1 -1225 6108 3275 1857 222 78 50 chr2 17254277 17254606 -236001977 - L1MA9 LINE L1 -4517 2581 2262 * 1748 185 13 0 chr2 17254606 17254908 -236001675 - AluJb SINE Alu -6 306 1 1857 222 78 50 chr2 17254908 17254931 -236001652 - L1MA9 LINE L1 -4836 2262 2241 2191 102 10 3 chr2 17254931 17255225 -236001358 - AluSg SINE Alu -14 296 1 1857 222 78 50 chr2 17255225 17255500 -236001083 - L1MA9 LINE L1 -4857 2241 1975 261 0 0 0 chr2 17255500 17255529 -236001054 + (TG)n Simple_repeat Simple_repeat 2 30 0 1857 222 78 50 chr2 17255529 17255834 -236000749 - L1MA9 LINE L1 -5123 1975 1675 300 264 55 142 chr2 17255954 17256265 -236000318 - L1MA9 LINE L1 -5552 1616 1333 238 349 6 40 chr2 17256470 17256645 -235999938 - L1MA9 LINE L1 -5967 1131 963 1761 221 18 37 chr2 17256653 17257164 -235999419 + L1ME3A LINE L1 4862 5362 -784 2014 268 25 2 chr2 17257165 17257736 -235998847 + L1ME1 LINE L1 5578 6161 -5 260 70 23 0 chr2 17257893 17257936 -235998647 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 687 148 35 0 chr2 17257936 17258051 -235998532 - AluSp/q SINE Alu -32 281 163 1420 131 4 48 chr2 17258053 17258282 -235998301 - AluSp SINE Alu -94 219 1 1381 287 123 21 chr2 17258320 17259063 -235997520 + L1ME3A LINE L1 5347 6164 -6 24 53 0 0 chr2 17259597 17259635 -235996948 + AT_rich Low_complexity Low_complexity 1 38 0 330 295 84 0 chr2 17260141 17260236 -235996347 + L2 LINE L2 3208 3310 -3 184 268 18 0 chr2 17261680 17261736 -235994847 - MIR SINE MIR 0 262 206 1520 199 7 24 chr2 17262225 17262517 -235994066 + AluJo SINE Alu 1 287 -25 26 0 0 0 chr2 17262519 17262545 -235994038 + AT_rich Low_complexity Low_complexity 1 26 0 185 279 23 0 chr2 17263726 17263769 -235992814 + L2 LINE L2 3210 3253 -19 203 279 114 57 chr2 17264012 17264170 -235992413 - MIR3 SINE MIR -6 202 36 30 0 0 0 chr2 17264867 17264897 -235991686 + AT_rich Low_complexity Low_complexity 1 30 0 2991 97 4 21 chr2 17264898 17265363 -235991220 - L1MA3 LINE L1 -1 6304 5848 252 0 0 0 chr2 17265903 17265931 -235990652 + (A)n Simple_repeat Simple_repeat 1 28 0 279 0 0 0 chr2 17266537 17266568 -235990015 + (GA)n Simple_repeat Simple_repeat 2 32 0 1562 167 12 87 chr2 17267298 17267633 -235988950 + AluJb SINE Alu 1 310 -2 269 260 0 10 chr2 17267660 17267760 -235988823 + GA-rich Low_complexity Low_complexity 1 99 0 495 294 77 28 chr2 17269006 17269084 -235987499 + MLT1I LTR MaLR 63 136 -273 2511 118 37 55 chr2 17269084 17269518 -235987065 - MSTA LTR MaLR -2 426 1 495 294 77 28 chr2 17269518 17269687 -235986896 + MLT1I LTR MaLR 136 322 -87 2059 137 23 3 chr2 17269695 17270001 -235986582 - AluSx SINE Alu 0 312 1 298 342 27 27 chr2 17270676 17270787 -235985796 + L2 LINE L2 3162 3272 0 311 306 136 14 chr2 17271458 17271605 -235984978 + MIR SINE MIR 36 200 -62 2277 119 26 98 chr2 17272820 17273281 -235983302 + MSTA LTR MaLR 1 428 0 286 258 55 9 chr2 17273374 17273483 -235983100 + MIR SINE MIR 37 155 -66 5167 117 24 10 chr2 17273907 17274716 -235981867 + L1PA15 LINE L1 5346 6165 0 371 209 93 71 chr2 17274722 17274904 -235981679 + L1M4 LINE L1 4614 4799 -1347 447 276 30 15 chr2 17276331 17276465 -235980118 + MIR SINE MIR 126 261 -1 21 0 0 0 chr2 17276504 17276525 -235980058 + AT_rich Low_complexity Low_complexity 1 21 0 601 285 150 74 chr2 17277393 17278764 -235977819 + L1MDa LINE L1 897 2254 -841 828 220 31 63 chr2 17278921 17279176 -235977407 + LTR55 LTR ERV 4 250 -298 2212 191 51 8 chr2 17279180 17279689 -235976894 - L1 LINE L1 -1861 4285 3755 343 357 64 11 chr2 17280319 17280585 -235975998 + L1ME LINE L1 4722 5001 -1145 54 62 0 0 chr2 17280721 17280817 -235975766 + AT_rich Low_complexity Low_complexity 1 96 0 324 284 131 17 chr2 17280839 17281075 -235975508 + L1ME LINE L1 5542 5804 -317 2359 75 10 0 chr2 17281297 17281602 -235974981 - AluYa5 SINE Alu -3 308 1 463 208 47 9 chr2 17281975 17282081 -235974502 - MER81 DNA DNA -2 112 3 390 259 103 14 chr2 17282515 17282672 -235973911 - MIR SINE MIR -54 208 41 22 0 0 0 chr2 17282933 17282955 -235973628 + AT_rich Low_complexity Low_complexity 1 22 0 189 362 0 0 chr2 17283509 17283567 -235973016 - L2 LINE L2 -220 3052 2995 306 0 0 0 chr2 17285134 17285168 -235971415 + (A)n Simple_repeat Simple_repeat 1 34 0 279 0 0 0 chr2 17285773 17285804 -235970779 + (GA)n Simple_repeat Simple_repeat 2 32 0 362 127 32 0 chr2 17286749 17286812 -235969771 + MER53 DNA DNA 124 188 -1 303 318 47 0 chr2 17287077 17287206 -235969377 + MIR SINE MIR 64 198 -64 184 277 0 46 chr2 17287282 17287347 -235969236 + L2 LINE L2 3252 3313 0 2193 120 0 7 chr2 17287633 17287941 -235968642 + AluSq SINE Alu 1 306 -7 228 234 32 117 chr2 17288043 17288137 -235968446 + L2 LINE L2 3226 3311 -2 232 209 0 0 chr2 17288140 17288183 -235968400 - MIR SINE MIR 0 262 220 497 292 81 89 chr2 17288190 17288735 -235967848 + L2 LINE L2 2738 3272 0 278 327 161 47 chr2 17290609 17291013 -235965570 + L2 LINE L2 2336 2785 -529 372 71 0 0 chr2 17291583 17291639 -235964944 + (TC)n Simple_repeat Simple_repeat 2 57 0 258 56 0 0 chr2 17291639 17291675 -235964908 + (CA)n Simple_repeat Simple_repeat 1 36 0 201 290 16 16 chr2 17292626 17292688 -235963895 - MIR SINE MIR -5 257 196 465 133 0 0 chr2 17292690 17292765 -235963818 + (CA)n Simple_repeat Simple_repeat 2 76 0 328 319 0 0 chr2 17292778 17292872 -235963711 - MIR SINE MIR -73 189 96 363 347 102 27 chr2 17293429 17293878 -235962705 + L2 LINE L2 1491 1973 -1341 258 294 0 0 chr2 17293953 17294021 -235962562 - L2 LINE L2 -1 3312 3245 2065 120 7 7 chr2 17294203 17294502 -235962081 - AluSx SINE Alu -13 299 1 538 143 11 0 chr2 17294678 17294769 -235961814 + L1PB1 LINE L1 5691 5782 -369 2485 117 5 3 chr2 17295800 17296177 -235960406 + L1PB1 LINE L1 5769 6146 -5 442 329 41 62 chr2 17296256 17296751 -235959832 - L2 LINE L2 -226 3046 2555 189 0 0 0 chr2 17297678 17297699 -235958884 + (TTA)n Simple_repeat Simple_repeat 1 21 0 881 159 29 58 chr2 17299321 17299529 -235957054 + MLT1A1 LTR MaLR 1 202 -163 393 233 117 0 chr2 17299554 17299657 -235956926 - MER45 DNA AcHobo -61 117 3 228 326 28 85 chr2 17299793 17299934 -235956649 + MIR3 SINE MIR 3 135 -73 216 333 12 12 chr2 17299926 17300010 -235956573 + MER5A DNA MER1_type 85 168 -21 * 237 250 18 0 chr2 17299959 17300015 -235956568 - MER5B DNA MER1_type -105 73 17 3952 145 38 16 chr2 17300529 17301259 -235955324 - L1MC1 LINE L1 0 6333 5588 618 294 42 32 chr2 17301283 17301862 -235954721 - L1ME LINE L1 -358 5804 5218 351 282 125 32 chr2 17301895 17302143 -235954440 - L1ME LINE L1 -1119 5027 4757 946 152 28 128 chr2 17302200 17302450 -235954133 - L1MC1 LINE L1 -87 6246 6022 358 244 12 0 chr2 17302452 17302538 -235954045 + Charlie5 DNA MER1_type 15 101 -2511 833 267 96 81 chr2 17302712 17303390 -235953193 - L1ME LINE L1 -2749 3397 2710 2653 99 7 24 chr2 17303482 17303907 -235952676 - MER11C LTR ERVK 0 1071 654 1540 202 67 21 chr2 17304019 17304395 -235952188 - MER52A LTR ERV1 -1362 393 1 238 255 20 10 chr2 17305416 17305518 -235951065 + L1MEc LINE L1 829 931 -5465 24 0 0 0 chr2 17305750 17305774 -235950809 + AT_rich Low_complexity Low_complexity 1 24 0 416 305 138 34 chr2 17306412 17306681 -235949902 - MLT1J1 LTR MaLR -23 423 127 643 162 0 0 chr2 17307107 17307212 -235949371 + AluSg/x SINE Alu 197 301 -11 247 209 174 0 chr2 17307545 17307660 -235948923 - L1ME LINE L1 -220 5901 5767 244 235 0 44 chr2 17307712 17307780 -235948803 - MIR SINE MIR -67 195 131 852 286 11 34 chr2 17309867 17310129 -235946454 + MIR SINE MIR 2 257 -5 270 347 27 48 chr2 17310529 17310676 -235945907 - MIR3 SINE MIR -7 201 58 2013 147 7 0 chr2 17310688 17311104 -235945479 + L1PA15 LINE L1 5392 5981 -184 441 310 28 0 chr2 17311168 17311313 -235945270 - L2 LINE L2 0 3313 3165 1235 153 0 5 chr2 17311364 17311573 -235945010 + L1PA15 LINE L1 5955 6162 -3 284 294 18 28 chr2 17313211 17313320 -235943263 + MIR SINE MIR 155 262 0 1470 306 117 24 chr2 17314902 17315049 -235941534 - L2 LINE L2 -10 3303 3171 2465 191 2 23 chr2 17315049 17315521 -235941062 - MER88 LTR ERVL 0 464 3 1470 306 117 24 chr2 17315521 17316288 -235940295 - L2 LINE L2 -142 3171 2302 293 307 128 46 chr2 17316633 17316851 -235939732 - L2 LINE L2 -58 3214 2979 209 298 93 26 chr2 17317366 17317517 -235939066 + L2 LINE L2 2851 3011 -261 2112 123 3 0 chr2 17317706 17317998 -235938585 + AluSq SINE Alu 17 309 -4 485 282 70 40 chr2 17318753 17318980 -235937603 - MIR SINE MIR -8 254 21 637 286 17 0 chr2 17319969 17320147 -235936436 - MIR SINE MIR -10 252 72 1426 114 5 9 chr2 17320152 17320371 -235936212 + MER30 DNA MER1_type 13 230 0 376 302 130 47 chr2 17320373 17320602 -235935981 - HAL1 LINE L1 -1148 1359 1098 695 226 0 0 chr2 17320602 17320717 -235935866 - FLAM_A SINE Alu -18 115 1 376 302 130 47 chr2 17320717 17320788 -235935795 - HAL1 LINE L1 -1409 1098 1034 219 171 0 0 chr2 17321099 17321134 -235935449 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 1666 187 15 80 chr2 17321818 17322229 -235934354 - MLT1B LTR MaLR -6 384 1 523 270 119 11 chr2 17322229 17322414 -235934169 - L2 LINE L2 -1008 2306 2102 187 143 0 0 chr2 17322930 17322958 -235933625 - L2 LINE L2 -5 3267 3240 236 315 41 14 chr2 17323160 17323233 -235933350 + L3b LINE CR1 1507 1581 -2 2115 112 10 3 chr2 17324874 17325170 -235931413 - AluSq SINE Alu -15 298 1 187 315 83 46 chr2 17325179 17325287 -235931296 + L2 LINE L2 3202 3313 0 414 309 7 0 chr2 17325594 17325746 -235930837 - LTR16B LTR ERVL -303 161 9 225 328 124 48 chr2 17326644 17326958 -235929625 - L2 LINE L2 -23 3249 2912 416 256 88 37 chr2 17327464 17327549 -235929034 + L1M4 LINE L1 2944 3023 -3123 2016 126 28 0 chr2 17327549 17327834 -235928749 + AluSx SINE Alu 1 293 -19 416 256 88 37 chr2 17327834 17328021 -235928562 + L1M4 LINE L1 3023 3230 -2916 909 262 77 5 chr2 17328083 17328472 -235928111 + L1M4 LINE L1 3364 3780 -2366 204 133 50 0 chr2 17328544 17328604 -235927979 + (TA)n Simple_repeat Simple_repeat 1 63 0 542 240 109 66 chr2 17328807 17329284 -235927299 + MLT1F LTR MaLR 88 529 -13 269 303 42 34 chr2 17330093 17330212 -235926371 + L2 LINE L2 3160 3279 -34 328 338 93 36 chr2 17330303 17330442 -235926141 + L2 LINE L2 3124 3270 -2 279 312 124 25 chr2 17330608 17330769 -235925814 - MIR SINE MIR -50 212 35 204 270 22 34 chr2 17330846 17330935 -235925648 + MIR SINE MIR 78 165 -97 58 87 0 0 chr2 17330950 17331099 -235925484 + AT_rich Low_complexity Low_complexity 1 149 0 395 323 55 0 chr2 17332015 17332142 -235924441 - MIR SINE MIR -109 153 20 274 322 59 0 chr2 17332504 17332622 -235923961 - MIR3 SINE MIR -26 182 58 452 210 0 10 chr2 17332662 17332762 -235923821 + MER94 DNA DNA 2 100 -34 752 259 44 35 chr2 17332829 17333057 -235923526 - MIR SINE MIR -21 241 12 198 250 132 0 chr2 17333215 17333291 -235923292 + MIR3 SINE MIR 98 183 -25 338 362 80 0 chr2 17333453 17333616 -235922967 - MIR SINE MIR -82 180 5 1686 195 0 16 chr2 17337415 17337722 -235918861 + AluJo SINE Alu 1 302 -10 2186 100 0 0 chr2 17337786 17338102 -235918481 - AluSg SINE Alu 0 316 1 428 251 82 41 chr2 17338423 17338594 -235917989 - MER5B DNA MER1_type 0 178 1 686 279 5 15 chr2 17339774 17339975 -235916608 + MER58A DNA MER1_type 1 199 -25 253 364 46 13 chr2 17340909 17341060 -235915523 + MIR SINE MIR 77 232 -30 2137 111 16 16 chr2 17341201 17341507 -235915076 - AluSp SINE Alu -7 306 1 869 235 98 125 chr2 17341591 17342161 -235914422 - MLT1H1 LTR MaLR 0 555 1 462 305 69 20 chr2 17342522 17342725 -235913858 - MIR SINE MIR -30 232 20 352 176 20 0 chr2 17343668 17343770 -235912813 + (CA)n Simple_repeat Simple_repeat 2 105 0 419 217 66 38 chr2 17344057 17344163 -235912420 - MER103 DNA DNA -53 113 5 300 235 154 22 chr2 17344402 17344538 -235912045 - MIR3 SINE MIR -21 187 34 2968 75 6 3 chr2 17345087 17345448 -235911135 - THE1B LTR MaLR 0 364 3 196 310 86 0 chr2 17347181 17347239 -235909344 - L3 LINE CR1 -12 1565 1503 674 235 12 53 chr2 17347258 17347428 -235909155 + MER45A DNA AcHobo 16 178 0 203 133 0 0 chr2 17347590 17347620 -235908963 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 531 243 107 6 chr2 17348049 17348218 -235908365 - MIR SINE MIR -2 260 75 507 357 38 13 chr2 17348305 17348540 -235908043 - L3 LINE CR1 -87 1490 1250 438 311 0 25 chr2 17348712 17348831 -235907752 - MIR SINE MIR -133 129 14 24 0 0 0 chr2 17349381 17349405 -235907178 + AT_rich Low_complexity Low_complexity 1 24 0 633 299 61 34 chr2 17352487 17352815 -235903768 - MLT1K LTR MaLR -8 580 244 1450 182 48 4 chr2 17353148 17353417 -235903166 + MLT2B1 LTR ERVL 1 281 -239 332 297 18 45 chr2 17353518 17353629 -235902954 - L3 LINE CR1 -840 737 630 742 170 57 19 chr2 17353663 17353822 -235902761 + MLT2B2 LTR ERVL 332 496 -19 206 265 33 26 chr2 17354000 17354151 -235902432 + (CACCC)n Simple_repeat Simple_repeat 5 156 0 272 246 55 82 chr2 17354366 17354476 -235902107 + L2 LINE L2 3203 3309 -4 346 358 128 20 chr2 17354482 17354926 -235901657 - L3 LINE CR1 -814 763 272 519 327 43 14 chr2 17355244 17355455 -235901128 - MIR SINE MIR 0 262 46 208 295 196 18 chr2 17355867 17355979 -235900604 + L2 LINE L2 3140 3271 -1 330 191 107 12 chr2 17357011 17357095 -235899488 - MER81 DNA DNA -3 111 20 324 168 76 0 chr2 17357445 17357576 -235899007 + (TA)n Simple_repeat Simple_repeat 2 142 0 646 338 100 30 chr2 17357890 17358412 -235898171 - L2 LINE L2 0 3313 2761 6161 177 47 29 chr2 17358427 17359148 -235897435 - L1MC3 LINE L1 -6 7779 7024 183 100 0 0 chr2 17359148 17359178 -235897405 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6161 177 47 29 chr2 17359178 17359700 -235896883 - L1MC3 LINE L1 -761 7024 6513 294 36 455 0 chr2 17359749 17359804 -235896779 - MADE1 DNA Mariner 0 80 1 5033 222 16 9 chr2 17359826 17360922 -235895661 - L1MC3 LINE L1 -1238 6547 5445 555 315 79 21 chr2 17361148 17361427 -235895156 - MER102b DNA MER1_type 0 341 47 437 320 132 30 chr2 17361505 17361839 -235894744 - L2 LINE L2 -568 2746 2379 505 312 3 4 chr2 17361841 17362006 -235894577 - MIR SINE MIR -15 193 30 2136 176 90 9 chr2 17363061 17363493 -235893090 - MLT1C LTR MaLR 0 467 1 252 0 0 0 chr2 17364040 17364068 -235892515 + (TC)n Simple_repeat Simple_repeat 1 28 0 2264 159 63 0 chr2 17365461 17365812 -235890771 + MER83C LTR ERV1 1 373 0 264 302 108 23 chr2 17366486 17366615 -235889968 + MIR SINE MIR 2 141 -121 221 306 16 0 chr2 17366677 17366739 -235889844 + L2 LINE L2 3188 3250 -22 709 266 112 17 chr2 17366889 17367122 -235889461 + MIR SINE MIR 8 262 0 262 149 43 0 chr2 17367437 17367484 -235889099 - L2 LINE L2 0 3313 3265 1293 194 164 27 chr2 17368525 17368890 -235887693 - Tigger5 DNA MER2_type 0 2323 4 309 216 182 0 chr2 17369006 17369094 -235887489 + MER5A DNA MER1_type 83 186 -3 354 244 35 0 chr2 17369190 17369276 -235887307 - L2 LINE L2 -2044 1270 1182 608 159 10 3 chr2 17369276 17369395 -235887188 + MLT1D LTR MaLR 350 505 0 573 291 119 0 chr2 17369438 17369648 -235886935 + MLT1J2 LTR MaLR 198 432 -18 1817 152 31 58 chr2 17371550 17371931 -235884652 + MLT1B LTR MaLR 20 390 0 214 278 28 14 chr2 17372274 17372346 -235884237 + L2 LINE L2 3240 3312 -1 227 412 76 0 chr2 17372410 17372541 -235884042 - L2 LINE L2 -5 3267 3127 253 330 11 0 chr2 17372879 17372967 -235883616 - MER94 DNA DNA 0 134 46 773 136 0 14 chr2 17423146 17423286 -235833297 + L1MA4 LINE L1 6159 6296 -4 182 293 147 13 chr2 17423446 17423521 -235833062 + L2 LINE L2 3187 3271 -1 212 338 27 0 chr2 17423721 17423795 -235832788 + L2 LINE L2 2978 3053 -219 6592 115 15 18 chr2 17424512 17426215 -235830368 - L1MA3 LINE L1 0 6305 4605 302 283 57 38 chr2 17426275 17426381 -235830202 - MIR3 SINE MIR -41 167 60 360 312 39 54 chr2 17427666 17427871 -235828712 - L2 LINE L2 0 3313 3112 192 254 79 16 chr2 17428023 17428086 -235828497 + L2 LINE L2 2969 3035 -237 953 70 0 0 chr2 17429080 17429209 -235827374 - L1PBa LINE L1 -6728 135 7 2697 23 0 0 chr2 17429209 17429513 -235827070 - AluYa5 SINE Alu -7 304 1 268 275 64 9 chr2 17430007 17430116 -235826467 - MIR SINE MIR -78 130 16 306 316 65 36 chr2 17430620 17430759 -235825824 + L2 LINE L2 3125 3267 -5 26 30 0 0 chr2 17430970 17431003 -235825580 + AT_rich Low_complexity Low_complexity 1 33 0 336 348 76 8 chr2 17431695 17431813 -235824770 - MIR SINE MIR -59 149 24 490 259 265 6 chr2 17433106 17433276 -235823307 - MIR SINE MIR -33 229 16 239 182 0 0 chr2 17433398 17433442 -235823141 + MIR SINE MIR 109 152 -110 365 310 47 51 chr2 17433585 17433840 -235822743 + HERVL LTR ERVL 2511 2764 -2890 262 288 68 0 chr2 17436639 17436712 -235819871 + MIR SINE MIR 46 123 -139 211 196 0 43 chr2 17437562 17437608 -235818975 - MIR SINE MIR 0 262 219 185 306 124 33 chr2 17438122 17438243 -235818340 - MIR SINE MIR -116 146 15 358 309 59 25 chr2 17439467 17439703 -235816880 + L1MC5 LINE L1 4360 4603 -1543 648 240 0 0 chr2 17439704 17439883 -235816700 + (TA)n Simple_repeat Simple_repeat 2 180 0 235 289 0 0 chr2 17439890 17439980 -235816603 - L1MC4 LINE L1 -1339 6703 6614 25 0 0 0 chr2 17440024 17440049 -235816534 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr2 17440071 17440093 -235816490 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2383 112 27 3 chr2 17440146 17440512 -235816071 + THE1C LTR MaLR 1 375 0 6514 182 128 62 chr2 17440512 17441985 -235814598 + THE1C-int LTR MaLR 1 1571 -9 2193 134 21 21 chr2 17441995 17442368 -235814215 + THE1C LTR MaLR 3 375 0 1335 193 0 0 chr2 17442369 17442623 -235813960 - L1 LINE L1 -1797 4349 4096 * 5905 162 7 4 chr2 17442615 17444316 -235812267 + L1PB1 LINE L1 4437 6146 -5 33 25 0 0 chr2 17444323 17444363 -235812220 + AT_rich Low_complexity Low_complexity 1 40 0 1702 99 63 0 chr2 17444363 17444649 -235811934 + L1PA14 LINE L1 5884 6185 0 1833 271 58 38 chr2 17444748 17445462 -235811121 + L1MC5 LINE L1 4762 5066 -1080 2174 99 7 13 chr2 17445462 17445765 -235810818 - AluSx SINE Alu -11 301 1 1833 271 58 38 chr2 17445765 17446111 -235810472 + L1MC5 LINE L1 5066 5403 -743 1120 245 82 68 chr2 17446389 17446964 -235809619 + L1MC5 LINE L1 6637 7219 -742 229 219 94 0 chr2 17447091 17447155 -235809428 + L1MC5 LINE L1 7275 7344 -617 289 164 194 0 chr2 17447155 17447222 -235809361 + MER116 DNA Mariner 1 80 0 585 258 70 58 chr2 17447227 17447696 -235808887 + L1MC5 LINE L1 7357 7831 -130 1239 258 101 90 chr2 17448499 17448741 -235807842 + MLT1E LTR MaLR 1 239 -354 2808 148 6 48 chr2 17448741 17449236 -235807347 + MER101 LTR ERV1 1 474 0 1239 258 101 90 chr2 17449236 17449529 -235807054 + MLT1E LTR MaLR 239 542 -51 228 370 0 0 chr2 17449875 17449948 -235806635 - L2 LINE L2 0 3272 3200 234 136 0 0 chr2 17450182 17450226 -235806357 + (A)n Simple_repeat Simple_repeat 1 44 0 29 70 0 0 chr2 17450642 17450699 -235805884 + AT_rich Low_complexity Low_complexity 1 57 0 365 276 179 24 chr2 17451109 17451490 -235805093 - L1M4 LINE L1 -2535 3611 3172 4729 209 40 10 chr2 17451716 17452430 -235804153 - L1 LINE L1 -2546 3600 2836 2040 148 0 6 chr2 17452430 17452741 -235803842 - AluSq SINE Alu -4 309 1 4729 209 40 10 chr2 17452741 17453187 -235803396 - L1 LINE L1 -3310 2836 2405 8654 171 17 13 chr2 17453201 17455880 -235800703 + L1MA5A LINE L1 3595 6280 -17 282 302 112 39 chr2 17455910 17456241 -235800342 - L1M4 LINE L1 -3385 2761 2407 1869 152 19 45 chr2 17456333 17456707 -235799876 + THE1B LTR MaLR 1 364 0 11313 108 10 1 chr2 17456707 17458272 -235798311 + THE1B-int LTR MaLR 1 1579 -1 1861 152 16 51 chr2 17458274 17458649 -235797934 + THE1B LTR MaLR 3 364 0 283 256 60 15 chr2 17458650 17458783 -235797800 - L1M4 LINE L1 -3861 2285 2147 1495 193 0 40 chr2 17459065 17459387 -235797196 - AluJb SINE Alu -3 309 1 884 274 129 11 chr2 17459442 17459822 -235796761 + LTR16B LTR ERVL 38 462 -2 2239 116 48 22 chr2 17461093 17461448 -235795135 + THE1B LTR MaLR 1 364 0 336 302 88 25 chr2 17461603 17461762 -235794821 - L1M4 LINE L1 -786 5360 5192 189 308 13 26 chr2 17461883 17461961 -235794622 + MIR SINE MIR 30 106 -102 273 333 54 0 chr2 17462075 17462168 -235794415 - MIR SINE MIR -142 120 23 349 296 100 1 chr2 17462551 17462696 -235793887 - MIR SINE MIR -14 248 90 236 300 121 66 chr2 17464044 17464317 -235792266 + L2 LINE L2 2447 2734 -580 313 319 65 36 chr2 17464349 17464487 -235792096 + MER5A DNA MER1_type 1 142 -47 557 299 110 39 chr2 17464877 17465158 -235791425 + L1MEd LINE L1 425 725 -5394 1605 235 27 64 chr2 17465260 17465821 -235790762 + L1MC5 LINE L1 6695 7234 -727 848 228 97 20 chr2 17465841 17466181 -235790402 + L1MC5 LINE L1 7250 7524 -437 1402 182 119 62 chr2 17466181 17466550 -235790033 - MLT1B LTR MaLR 0 390 1 2160 187 24 22 chr2 17466564 17466981 -235789602 - MLT1B-int LTR MaLR -15 1356 939 388 253 21 0 chr2 17466997 17467092 -235789491 - MLT1B LTR MaLR -291 99 3 316 262 90 0 chr2 17467092 17467214 -235789369 + L1MC5 LINE L1 7516 7648 -313 5643 135 28 8 chr2 17467240 17468202 -235788381 + L1MA5 LINE L1 5316 6296 -4 557 224 88 18 chr2 17468223 17468451 -235788132 + L1MC5 LINE L1 7683 7926 -35 253 301 18 0 chr2 17468608 17468721 -235787862 + L1ME3A LINE L1 4537 4651 -1495 282 143 0 0 chr2 17468782 17468831 -235787752 + (GAA)n Simple_repeat Simple_repeat 2 50 0 424 313 107 8 chr2 17468847 17469109 -235787474 + L1ME3A LINE L1 4712 4999 -1147 5880 318 82 14 chr2 17469219 17470700 -235785883 + L2 LINE L2 92 1790 -1524 180 0 0 0 chr2 17470700 17470720 -235785863 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5880 318 82 14 chr2 17470720 17471559 -235785024 + L2 LINE L2 1790 2570 -744 1609 218 56 127 chr2 17471562 17472309 -235784274 - LTR8A LTR ERV1 0 727 34 760 250 154 11 chr2 17472397 17472804 -235783779 + L2 LINE L2 2754 3235 -78 25 108 0 0 chr2 17472868 17472970 -235783613 + AT_rich Low_complexity Low_complexity 1 102 0 1044 282 52 63 chr2 17473097 17473619 -235782964 + L1ME3A LINE L1 5333 5848 -322 309 300 150 22 chr2 17474741 17474999 -235781584 + L2 LINE L2 2791 3084 -188 218 216 14 0 chr2 17476891 17476965 -235779618 + (TA)n Simple_repeat Simple_repeat 1 75 0 899 152 28 0 chr2 17480281 17480466 -235776117 - AluSc SINE Alu 0 320 132 2048 88 35 0 chr2 17480466 17480750 -235775833 - AluY SINE Alu -17 294 1 585 264 159 42 chr2 17482679 17483217 -235773366 + L1ME4a LINE L1 5373 5955 -166 346 270 9 61 chr2 17483282 17483397 -235773186 - L2 LINE L2 -47 3266 3158 334 218 52 15 chr2 17483680 17483783 -235772800 + MIR SINE MIR 42 153 -68 489 342 35 5 chr2 17483923 17484122 -235772461 - MIR SINE MIR 0 262 58 230 299 23 23 chr2 17484537 17484624 -235771959 + MIR SINE MIR 38 124 -84 282 106 0 0 chr2 17484839 17484886 -235771697 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr2 17485546 17485575 -235771008 + AT_rich Low_complexity Low_complexity 1 29 0 182 217 87 0 chr2 17485821 17485867 -235770716 + MIR SINE MIR 122 171 -91 1666 169 180 96 chr2 17486009 17486602 -235769981 + L1ME2 LINE L1 5344 5986 -178 396 280 69 52 chr2 17486786 17487208 -235769375 - L1 LINE L1 -3045 3101 2673 484 304 77 0 chr2 17487531 17487738 -235768845 + Charlie8 DNA MER1_type 1570 1792 -625 533 230 44 88 chr2 17489361 17489587 -235766996 - L2 LINE L2 -1 3312 3097 2175 110 3 0 chr2 17490102 17490393 -235766190 + AluSq SINE Alu 1 292 -21 1824 186 39 14 chr2 17490720 17491135 -235765448 - L1PBa LINE L1 -5834 1029 605 1395 246 99 8 chr2 17491148 17491644 -235764939 - L1PBa LINE L1 -6316 547 7 2035 246 74 49 chr2 17491654 17492022 -235764561 + L1M4 LINE L1 3504 3861 -2285 1527 177 9 40 chr2 17492022 17492344 -235764239 + AluJo SINE Alu 1 312 0 2035 246 74 49 chr2 17492344 17492809 -235763774 + L1M4 LINE L1 3861 4358 -1788 725 313 18 3 chr2 17492982 17493308 -235763275 + L1ME3A LINE L1 2669 2999 -3147 22 0 0 0 chr2 17493567 17493589 -235762994 + AT_rich Low_complexity Low_complexity 1 22 0 885 269 60 85 chr2 17493683 17494749 -235761834 + L1ME3A LINE L1 4013 5051 -1095 297 0 0 0 chr2 17494925 17494958 -235761625 + (CA)n Simple_repeat Simple_repeat 2 34 0 242 308 8 8 chr2 17494958 17495075 -235761508 + L1ME3A LINE L1 5321 5437 -725 2832 177 4 2 chr2 17495080 17495582 -235761001 + L1PA8 LINE L1 1 503 -5372 25909 143 10 20 chr2 17495610 17501339 -235755244 + L1PA8 LINE L1 797 6476 -11 755 287 117 13 chr2 17501320 17501759 -235754824 + L1ME3A LINE L1 5416 5890 -280 * 284 281 22 22 chr2 17501784 17501873 -235754710 - MER45C DNA AcHobo -502 451 363 1090 266 86 0 chr2 17501932 17502188 -235754395 - MER45C DNA AcHobo -675 278 1 882 255 34 40 chr2 17502254 17502552 -235754031 + L1MC4 LINE L1 6810 7105 -937 269 247 0 12 chr2 17502620 17502701 -235753882 + L1MC5 LINE L1 7002 7081 -880 491 320 76 0 chr2 17502792 17503017 -235753566 + L1MC4 LINE L1 7189 7430 -612 352 266 83 18 chr2 17503001 17503219 -235753364 + L1MC5 LINE L1 7252 7483 -478 * 265 270 184 9 chr2 17503298 17503511 -235753072 + L1MC4 LINE L1 7648 8025 -17 2242 191 41 59 chr2 17505732 17505847 -235750736 - MER54A LTR ERVL 0 644 528 1402 40 0 60 chr2 17505847 17506047 -235750536 + L1PA6 LINE L1 5967 6154 0 2242 191 41 59 chr2 17506047 17506086 -235750497 - MER54A LTR ERVL -116 528 490 8250 75 2 4 chr2 17506086 17507159 -235749424 - MER11C LTR ERVK 0 1071 1 2242 191 41 59 chr2 17507159 17507868 -235748715 - MER54A LTR ERVL -154 490 1 1269 251 109 41 chr2 17507934 17508400 -235748183 + MLT1D LTR MaLR 8 505 0 398 261 27 60 chr2 17508486 17508670 -235747913 - MER5B DNA MER1_type 0 178 1 296 223 330 10 chr2 17508690 17508793 -235747790 + L2 LINE L2 3137 3272 0 1317 264 89 33 chr2 17508941 17509425 -235747158 - MLT1J LTR MaLR 0 511 1 190 300 0 0 chr2 17509524 17509574 -235747009 - L2 LINE L2 -259 3054 3005 192 253 103 46 chr2 17510312 17510399 -235746184 - MIR SINE MIR -7 255 164 233 331 84 28 chr2 17511166 17511308 -235745275 + L2 LINE L2 2905 3054 -218 289 278 83 30 chr2 17511716 17511849 -235744734 - L2 LINE L2 -171 3142 3003 186 332 82 46 chr2 17511938 17512134 -235744449 + L2 LINE L2 2891 3093 -179 21 36 0 0 chr2 17512387 17512415 -235744168 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 17514160 17514202 -235742381 + AT_rich Low_complexity Low_complexity 1 42 0 5238 72 0 16 chr2 17514219 17514929 -235741654 - L1PA7 LINE L1 -1668 4478 3780 6734 74 1 0 chr2 17514933 17516606 -235739977 + L1PA7 LINE L1 4466 6143 -11 419 207 0 26 chr2 17516700 17516816 -235739767 - HAL1 LINE L1 -105 2402 2290 6439 175 65 12 chr2 17516918 17518487 -235738096 - L1M1 LINE L1 -4065 1263 2 2740 178 41 6 chr2 17518498 17519038 -235737545 - L1 LINE L1 -1957 4189 3631 23 33 0 0 chr2 17519044 17519074 -235737509 + AT_rich Low_complexity Low_complexity 1 30 0 296 274 71 0 chr2 17519079 17519192 -235737391 - HAL1 LINE L1 -865 1642 1522 523 290 44 1 chr2 17519327 17519484 -235737099 + MIR SINE MIR 8 172 -36 21 0 0 0 chr2 17520601 17520622 -235735961 + AT_rich Low_complexity Low_complexity 1 21 0 2458 222 83 32 chr2 17521066 17521814 -235734769 - L1MB7 LINE L1 -10 6174 5389 25 31 0 0 chr2 17521993 17522025 -235734558 + AT_rich Low_complexity Low_complexity 1 32 0 207 191 0 43 chr2 17522178 17522225 -235734358 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 328 356 44 7 chr2 17523818 17523953 -235732630 + MIR3 SINE MIR 9 148 -60 255 335 84 77 chr2 17523965 17524356 -235732227 - LTR16C LTR ERVL -12 479 86 1290 141 5 0 chr2 17524536 17524745 -235731838 + L1PB3 LINE L1 5954 6160 -345 977 111 6 22 chr2 17524745 17524925 -235731658 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 1290 141 5 0 chr2 17524925 17525087 -235731496 + L1PB3 LINE L1 6160 6505 0 361 260 39 78 chr2 17525177 17525260 -235731323 - MIR SINE MIR -87 175 99 890 216 72 29 chr2 17525260 17525468 -235731115 - MER20 DNA MER1_type -2 217 1 361 260 39 78 chr2 17525468 17525538 -235731045 - MIR SINE MIR -163 99 28 204 91 61 0 chr2 17525769 17525802 -235730781 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 406 303 80 86 chr2 17525811 17526148 -235730435 - L2 LINE L2 -2 3270 2936 281 344 23 31 chr2 17527247 17527375 -235729208 + MER5A DNA MER1_type 63 189 0 1500 288 98 14 chr2 17528528 17529388 -235727195 - L2 LINE L2 -5 3308 2377 685 270 90 17 chr2 17530634 17530706 -235725877 - MIR SINE MIR -7 255 190 1456 87 73 23 chr2 17530706 17530925 -235725658 - MER30 DNA MER1_type 0 230 1 685 270 90 17 chr2 17530925 17531085 -235725498 - MIR SINE MIR -72 190 6 1912 157 0 3 chr2 17531605 17531905 -235724678 + AluJo SINE Alu 13 311 -1 286 326 79 28 chr2 17532409 17532624 -235723959 - MIR SINE MIR -34 228 3 1694 172 48 43 chr2 17533735 17534107 -235722476 - THE1C LTR MaLR -1 374 1 401 305 92 62 chr2 17534900 17535205 -235721378 + HAL1 LINE L1 812 1125 -1382 12784 86 37 2 chr2 17535448 17537956 -235718627 - L1PA7 LINE L1 -3 6151 3437 338 298 14 20 chr2 17538159 17538321 -235718262 + L1M4c LINE L1 1549 1913 -830 465 277 31 13 chr2 17538321 17538480 -235718103 - MLT1K LTR MaLR -8 580 419 408 257 45 56 chr2 17539351 17539530 -235717053 - MER5B DNA MER1_type -1 177 1 6459 32 0 4 chr2 17540458 17541232 -235715351 - L1PA4 LINE L1 -3 6152 5382 4985 278 109 20 chr2 17541730 17543976 -235712607 + L2 LINE L2 299 2718 -596 925 252 47 50 chr2 17543975 17544293 -235712290 + L2 LINE L2 2991 3307 -6 * 39 68 0 0 chr2 17544337 17544411 -235712172 + AT_rich Low_complexity Low_complexity 1 74 0 286 369 40 0 chr2 17544450 17544599 -235711984 - MIR SINE MIR -2 260 106 21 0 0 0 chr2 17545340 17545361 -235711222 + AT_rich Low_complexity Low_complexity 1 21 0 1044 146 39 10 chr2 17545581 17545787 -235710796 - L1PA13 LINE L1 -2 6161 5950 385 271 80 97 chr2 17545897 17546116 -235710467 - HAL1 LINE L1 -385 2122 1901 2332 100 0 0 chr2 17546116 17546416 -235710167 + AluSx SINE Alu 5 304 -8 385 271 80 97 chr2 17546416 17546672 -235709911 - HAL1 LINE L1 -606 1901 1655 6204 158 43 12 chr2 17546698 17548474 -235708109 - L1MA8 LINE L1 -156 7554 5593 979 229 0 0 chr2 17548487 17548688 -235707895 - L1MA8 LINE L1 -4553 3012 2812 1126 124 6 0 chr2 17548790 17548959 -235707624 - L1P4 LINE L1 -382 5779 5610 23 0 0 0 chr2 17549428 17549451 -235707132 + AT_rich Low_complexity Low_complexity 1 23 0 288 155 0 107 chr2 17550118 17550202 -235706381 + L1MB4 LINE L1 6106 6180 0 201 306 0 0 chr2 17550526 17550575 -235706008 - MIR SINE MIR -24 238 190 2182 162 50 29 chr2 17552058 17552539 -235704044 + L1MC2 LINE L1 5852 6342 -2 576 288 131 4 chr2 17554251 17554480 -235702103 + MIR SINE MIR 2 259 -3 26 0 0 0 chr2 17555496 17555522 -235701061 + AT_rich Low_complexity Low_complexity 1 26 0 1960 281 139 8 chr2 17556168 17557092 -235699491 - L2 LINE L2 -10 3303 2256 467 284 86 25 chr2 17558697 17558859 -235697724 - MIR SINE MIR -16 246 75 385 283 33 8 chr2 17558879 17558999 -235697584 - L2 LINE L2 0 3313 3191 2100 91 7 11 chr2 17559362 17559680 -235696903 + AluSq SINE Alu 1 317 0 234 215 187 56 chr2 17559716 17559823 -235696760 + L2 LINE L2 3192 3312 -1 308 253 13 13 chr2 17559981 17560056 -235696527 + MIR3 SINE MIR 85 159 -49 356 237 254 34 chr2 17560631 17560808 -235695775 - MIR SINE MIR -10 252 37 23 33 0 0 chr2 17561466 17561496 -235695087 + AT_rich Low_complexity Low_complexity 1 30 0 2274 87 7 0 chr2 17562822 17563122 -235693461 - AluY SINE Alu -9 302 1 200 143 18 71 chr2 17563282 17563338 -235693245 + L2 LINE L2 2294 2346 -968 1992 110 0 33 chr2 17564065 17564366 -235692217 + AluSg SINE Alu 1 291 -19 259 202 11 43 chr2 17568127 17568221 -235688362 + (CCCCG)n Simple_repeat Simple_repeat 5 95 0 224 284 142 62 chr2 17570468 17570693 -235685890 + L2 LINE L2 3015 3257 -56 22 0 0 0 chr2 17571150 17571172 -235685411 + AT_rich Low_complexity Low_complexity 1 22 0 297 382 65 58 chr2 17571374 17571939 -235684644 + L2 LINE L2 2398 2966 -348 542 286 74 30 chr2 17572562 17572793 -235683790 + MIR SINE MIR 3 243 -19 794 206 32 92 chr2 17572834 17573052 -235683531 - MER63A DNA MER1_type -3 207 3 198 289 0 0 chr2 17573541 17573586 -235682997 - L2 LINE L2 -19 3253 3209 449 330 81 73 chr2 17573827 17574088 -235682495 - L2 LINE L2 -5 3267 3005 219 411 28 0 chr2 17574237 17574344 -235682239 + L2 LINE L2 3177 3286 -27 277 230 138 0 chr2 17576724 17576811 -235679772 + L1ME3A LINE L1 6046 6144 -26 295 256 11 33 chr2 17576823 17576913 -235679670 + GA-rich Low_complexity Low_complexity 2 89 0 1602 171 7 10 chr2 17578150 17578448 -235678135 + AluJb SINE Alu 6 302 -10 22 56 0 0 chr2 17578728 17578764 -235677819 + AT_rich Low_complexity Low_complexity 1 36 0 36 23 0 0 chr2 17578833 17578876 -235677707 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr2 17578953 17578988 -235677595 + AT_rich Low_complexity Low_complexity 1 35 0 1175 157 5 20 chr2 17579995 17580199 -235676384 + AluJb SINE Alu 112 312 0 288 47 47 0 chr2 17581059 17581102 -235675481 + L1MC1 LINE L1 6288 6332 -1 420 276 20 20 chr2 17581482 17581595 -235674988 - MIR SINE MIR -59 149 37 208 200 57 29 chr2 17581675 17581745 -235674838 - L3b LINE CR1 -189 1394 1323 1302 229 35 10 chr2 17581750 17582060 -235674523 - MLT1C LTR MaLR -6 461 144 342 119 0 17 chr2 17582057 17582116 -235674467 + FLAM SINE Alu 75 132 -1 * 240 35 0 0 chr2 17582287 17582316 -235674267 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 601 324 68 30 chr2 17582675 17583101 -235673482 + L2 LINE L2 2148 2589 -725 1366 188 0 4 chr2 17583239 17583473 -235673110 + AluJo SINE Alu 24 256 -56 184 318 0 16 chr2 17584644 17584707 -235671876 - MIR SINE MIR -49 213 152 215 383 45 31 chr2 17584712 17585045 -235671538 - L2 LINE L2 -221 3051 2709 319 368 64 42 chr2 17585078 17585437 -235671146 - L2 LINE L2 -703 2611 2245 216 0 0 0 chr2 17585522 17585546 -235671037 + (A)n Simple_repeat Simple_repeat 1 24 0 1880 138 0 24 chr2 17586634 17586930 -235669653 + AluJo SINE Alu 11 299 -13 21 0 0 0 chr2 17588569 17588590 -235667993 + GC_rich Low_complexity Low_complexity 1 21 0 238 322 113 26 chr2 17589122 17589237 -235667346 + L2 LINE L2 3185 3309 -4 23 0 0 0 chr2 17590430 17590453 -235666130 + AT_rich Low_complexity Low_complexity 1 23 0 351 232 11 32 chr2 17592402 17592497 -235664086 - MIR3 SINE MIR -3 205 113 321 305 0 0 chr2 17593399 17593481 -235663102 + CT-rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr2 17594902 17594930 -235661653 + AT_rich Low_complexity Low_complexity 1 28 0 268 307 217 12 chr2 17596754 17596920 -235659663 + MIR SINE MIR 59 258 -4 275 269 120 9 chr2 17597072 17597180 -235659403 - L2 LINE L2 -19 3294 3175 186 287 98 16 chr2 17598067 17598189 -235658394 + MIR SINE MIR 101 232 -30 193 115 19 39 chr2 17598955 17599007 -235657576 + (CATA)n Simple_repeat Simple_repeat 4 54 0 260 236 81 73 chr2 17599496 17599671 -235656912 + MIR SINE MIR 16 184 -64 180 0 0 0 chr2 17601483 17601503 -235655080 + (A)n Simple_repeat Simple_repeat 1 20 0 2548 43 0 10 chr2 17601506 17601811 -235654772 + AluY SINE Alu 3 304 -7 392 332 50 20 chr2 17601811 17602009 -235654574 - MIR SINE MIR -25 237 34 25 0 0 0 chr2 17602036 17602061 -235654522 + AT_rich Low_complexity Low_complexity 1 25 0 389 216 94 41 chr2 17602078 17602392 -235654191 - L1MC5 LINE L1 -71 7890 7528 233 294 106 50 chr2 17602464 17602624 -235653959 + MIR SINE MIR 84 252 -10 268 288 15 0 chr2 17602635 17602701 -235653882 + GA-rich Low_complexity Low_complexity 2 68 0 209 333 39 0 chr2 17603118 17603196 -235653387 + MIR3 SINE MIR 85 165 -43 467 340 86 5 chr2 17603212 17603409 -235653174 + MIR SINE MIR 2 214 -48 255 143 131 12 chr2 17604299 17604383 -235652200 - L1ME4a LINE L1 -4 6117 6024 404 302 115 21 chr2 17604452 17604687 -235651896 - L1ME4a LINE L1 -225 5896 5640 220 204 0 0 chr2 17605050 17605094 -235651489 + (CAT)n Simple_repeat Simple_repeat 2 45 0 261 411 40 0 chr2 17605434 17605558 -235651025 - L2 LINE L2 -2 3270 3142 253 399 21 0 chr2 17606077 17606220 -235650363 + MIR SINE MIR 117 262 0 201 344 41 25 chr2 17606275 17606397 -235650186 + L2 LINE L2 3189 3312 -1 512 235 132 29 chr2 17606637 17606847 -235649736 - MIR SINE MIR -10 252 14 469 241 157 31 chr2 17606913 17607104 -235649479 - L2 LINE L2 0 3313 3099 201 259 52 0 chr2 17607900 17607958 -235648625 + MIR SINE MIR 129 189 -73 431 277 72 39 chr2 17608074 17608253 -235648330 - MIR SINE MIR -57 205 18 222 150 0 0 chr2 17608271 17608311 -235648272 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1445 211 143 46 chr2 17608456 17608910 -235647673 - MLT1J LTR MaLR -10 501 4 371 313 41 20 chr2 17609077 17609224 -235647359 + MIR3 SINE MIR 36 185 -23 27 29 0 0 chr2 17609785 17609819 -235646764 + AT_rich Low_complexity Low_complexity 1 34 0 553 317 31 21 chr2 17609918 17610262 -235646321 + L1M4 LINE L1 4696 5059 -1087 489 169 12 0 chr2 17610776 17610859 -235645724 - AluS SINE Alu -228 85 2 28 29 0 0 chr2 17611181 17611216 -235645367 + AT_rich Low_complexity Low_complexity 1 35 0 369 270 97 30 chr2 17611401 17611638 -235644945 + L1ME LINE L1 4733 4985 -1161 612 280 106 27 chr2 17611695 17612307 -235644276 + L1ME LINE L1 5131 5805 -357 2324 105 30 21 chr2 17612307 17612679 -235643904 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr2 17613721 17613743 -235642840 + AT_rich Low_complexity Low_complexity 1 22 0 1342 80 0 0 chr2 17614685 17614847 -235641736 - AluSc SINE Alu -16 293 132 253 208 57 75 chr2 17615132 17615238 -235641345 + MIR SINE MIR 109 212 -50 22 70 0 0 chr2 17616188 17616231 -235640352 + AT_rich Low_complexity Low_complexity 1 43 0 506 356 85 36 chr2 17616740 17617375 -235639208 + L2 LINE L2 2594 3258 -14 537 315 36 24 chr2 17617752 17618096 -235638487 - L1 LINE L1 -1087 5059 4696 204 40 0 0 chr2 17618206 17618231 -235638352 + (TA)n Simple_repeat Simple_repeat 2 26 0 358 306 41 20 chr2 17618792 17618939 -235637644 - MIR3 SINE MIR -23 185 36 1445 211 143 46 chr2 17619106 17619560 -235637023 + MLT1J LTR MaLR 4 501 -10 222 150 0 0 chr2 17619705 17619745 -235636838 + (TAA)n Simple_repeat Simple_repeat 2 41 0 431 277 72 39 chr2 17619763 17619942 -235636641 + MIR SINE MIR 18 205 -57 201 259 52 0 chr2 17620058 17620116 -235636467 - MIR SINE MIR -73 189 129 469 241 157 31 chr2 17620912 17621103 -235635480 + L2 LINE L2 3099 3313 0 512 235 132 29 chr2 17621169 17621379 -235635204 + MIR SINE MIR 14 252 -10 201 344 41 25 chr2 17621619 17621741 -235634842 - L2 LINE L2 -1 3312 3189 259 399 21 0 chr2 17621796 17621939 -235634644 - MIR SINE MIR 0 262 117 261 411 40 0 chr2 17622458 17622582 -235634001 + L2 LINE L2 3142 3270 -2 220 204 0 0 chr2 17622922 17622966 -235633617 + (ATG)n Simple_repeat Simple_repeat 2 45 0 404 302 115 21 chr2 17623329 17623564 -235633019 + L1ME4a LINE L1 5640 5896 -225 501 279 134 0 chr2 17624715 17624887 -235631696 - MIR SINE MIR -24 238 44 321 295 25 25 chr2 17625109 17625231 -235631352 + L3 LINE CR1 1148 1269 -308 330 284 0 0 chr2 17625231 17625326 -235631257 + L1M4 LINE L1 4774 4868 -1278 1664 133 149 0 chr2 17625549 17625850 -235630733 + MER7A DNA MER2_type 3 346 0 21 0 0 0 chr2 17626314 17626335 -235630248 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 17626777 17626806 -235629777 + AT_rich Low_complexity Low_complexity 1 29 0 2494 71 0 3 chr2 17626940 17627249 -235629334 + AluSg SINE Alu 1 308 -2 235 276 124 48 chr2 17627288 17627393 -235629190 - MIR SINE MIR -76 132 20 916 125 8 0 chr2 17627647 17627775 -235628808 + AluJb SINE Alu 1 129 -183 212 98 0 49 chr2 17627776 17627817 -235628766 + (GAAAA)n Simple_repeat Simple_repeat 5 43 0 1161 128 0 0 chr2 17627836 17628000 -235628583 + AluJb SINE Alu 129 292 -20 357 349 31 26 chr2 17628828 17629023 -235627560 - MIR3 SINE MIR -7 201 6 262 343 102 19 chr2 17629328 17629544 -235627039 + L2 LINE L2 2628 2861 -453 233 301 125 7 chr2 17629698 17629834 -235626749 + L2 LINE L2 3161 3312 -1 233 342 40 0 chr2 17630074 17630150 -235626433 + MIR SINE MIR 36 114 -148 192 152 0 0 chr2 17630230 17630263 -235626320 + CT-rich Low_complexity Low_complexity 2 34 0 475 224 47 0 chr2 17630598 17630705 -235625878 + MER94 DNA DNA 7 118 -16 1015 263 79 67 chr2 17630719 17631198 -235625385 + L2 LINE L2 2825 3309 -4 22 0 0 0 chr2 17631700 17631722 -235624861 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 17631881 17631904 -235624679 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1058 202 0 20 chr2 17631905 17632103 -235624480 - AluJb SINE Alu -32 280 87 467 278 108 19 chr2 17632281 17632639 -235623944 - L1MEd LINE L1 -865 1625 1277 2140 132 3 0 chr2 17632644 17632954 -235623629 + AluSx SINE Alu 2 312 0 35 0 0 0 chr2 17632954 17632989 -235623594 + AT_rich Low_complexity Low_complexity 1 35 0 512 231 12 24 chr2 17633143 17633312 -235623271 - L1MEd LINE L1 -4991 1128 962 398 303 66 0 chr2 17634220 17634372 -235622211 - MIR SINE MIR -13 249 88 1742 130 70 0 chr2 17634382 17634652 -235621931 + AluSg1 SINE Alu 1 289 -20 1934 120 24 3 chr2 17635558 17635849 -235620734 - AluSx SINE Alu -15 297 1 737 266 211 27 chr2 17636458 17637019 -235619564 + L2 LINE L2 2381 3036 -277 1190 157 5 20 chr2 17637799 17638003 -235618580 + AluJb SINE Alu 112 312 0 2376 197 84 47 chr2 17639745 17640446 -235616137 + LTR8A LTR ERV1 1 727 0 235 304 51 29 chr2 17642084 17642189 -235614394 - MER5A DNA MER1_type -61 128 11 192 255 11 85 chr2 17642287 17642381 -235614202 - L2 LINE L2 0 3272 3186 225 0 0 0 chr2 17642405 17642430 -235614153 + (CAGTG)n Simple_repeat Simple_repeat 1 25 0 282 279 98 16 chr2 17642923 17643045 -235613538 + MIR3 SINE MIR 46 177 -31 227 195 187 0 chr2 17644430 17644533 -235612050 + MIR SINE MIR 114 246 -16 337 200 47 47 chr2 17644932 17645017 -235611566 - L1MA6 LINE L1 -13 6287 6203 425 280 118 65 chr2 17645139 17645673 -235610910 - MLT1L LTR MaLR -19 492 3 212 263 0 74 chr2 17646676 17646771 -235609812 - MIR3 SINE MIR -17 191 104 1947 154 3 3 chr2 17646798 17647090 -235609493 + AluSx SINE Alu 3 294 -18 231 214 0 0 chr2 17647446 17647488 -235609095 + (CA)n Simple_repeat Simple_repeat 1 42 0 2193 188 94 30 chr2 17647763 17648232 -235608351 - MLT1D LTR MaLR 0 505 7 445 255 71 42 chr2 17648285 17648497 -235608086 - MIR SINE MIR 0 262 45 327 344 8 16 chr2 17648744 17648872 -235607711 - MIR SINE MIR -116 146 20 287 254 14 0 chr2 17649382 17649453 -235607130 - L2 LINE L2 0 3313 3242 183 327 24 54 chr2 17649889 17650057 -235606526 - L2 LINE L2 -555 2759 2597 587 80 36 27 chr2 17650813 17650925 -235605658 + CT-rich Low_complexity Low_complexity 4 116 0 2057 148 0 3 chr2 17650927 17651232 -235605351 - AluSx SINE Alu -3 309 6 1484 181 36 53 chr2 17651239 17651542 -235605041 - AluJo SINE Alu -14 298 1 1978 97 60 0 chr2 17651845 17652228 -235604355 + AluSx SINE Alu 1 399 0 2271 183 45 0 chr2 17652248 17652652 -235603931 - MER61C LTR ERV1 0 434 13 2491 72 0 3 chr2 17653001 17653306 -235603277 + AluY SINE Alu 1 304 -7 243 290 38 2 chr2 17653852 17653959 -235602624 + MIR SINE MIR 33 143 -65 1740 209 39 70 chr2 17653969 17654482 -235602101 + MLT1D LTR MaLR 1 497 -8 2093 108 35 52 chr2 17654545 17654914 -235601669 + THE1B LTR MaLR 2 364 0 207 0 0 0 chr2 17655454 17655477 -235601106 + (T)n Simple_repeat Simple_repeat 1 23 0 1580 115 0 63 chr2 17655479 17655732 -235600851 - AluSx SINE Alu -75 237 1 2689 184 86 48 chr2 17656964 17657665 -235598918 - LTR8A LTR ERV1 0 727 1 24 32 0 0 chr2 17659929 17659960 -235596623 + AT_rich Low_complexity Low_complexity 1 31 0 227 277 45 54 chr2 17660581 17660693 -235595890 + MER5B DNA MER1_type 2 112 -66 540 289 40 73 chr2 17660912 17661466 -235595117 - MLT1F1 LTR MaLR -35 520 1 237 279 0 15 chr2 17661753 17661821 -235594762 + (TA)n Simple_repeat Simple_repeat 2 68 0 2321 100 3 13 chr2 17661979 17662289 -235594294 - AluSq SINE Alu -6 307 1 247 250 143 0 chr2 17662526 17662610 -235593973 + MIR SINE MIR 96 191 -71 2493 71 0 0 chr2 17663305 17663601 -235592982 - AluSg SINE Alu -14 296 1 25 51 0 0 chr2 17663696 17663735 -235592848 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 17664428 17664466 -235592117 + AT_rich Low_complexity Low_complexity 1 38 0 380 211 154 77 chr2 17664694 17664850 -235591733 - MER5A DNA MER1_type -12 177 10 423 231 110 0 chr2 17664987 17665078 -235591505 + Charlie1 DNA MER1_type 11 111 -2650 825 80 0 9 chr2 17665178 17665290 -235591293 + L1MA4A LINE L1 5863 5973 -330 1230 126 69 0 chr2 17665290 17665465 -235591118 + AluJo SINE Alu 87 273 -39 1998 97 28 53 chr2 17665473 17665833 -235590750 + L1MA4A LINE L1 5953 6303 0 445 302 99 36 chr2 17665874 17666380 -235590203 + L1ME LINE L1 5262 5799 -322 261 207 135 0 chr2 17666418 17666498 -235590085 + MIR SINE MIR 83 176 -86 216 333 42 10 chr2 17669031 17669127 -235587456 + MIR SINE MIR 79 177 -85 5996 102 6 15 chr2 17670054 17670942 -235585641 - L1PB3 LINE L1 0 6154 5275 212 338 0 0 chr2 17670998 17671078 -235585505 - MIR SINE MIR -120 142 63 1811 166 54 0 chr2 17671985 17672281 -235584302 - AluSx SINE Alu 0 312 1 272 253 11 42 chr2 17672482 17672577 -235584006 - MIR SINE MIR -98 110 19 246 221 62 5 chr2 17673169 17673299 -235583284 - MER91 DNA MER1_type -4 192 1 269 278 43 40 chr2 17673398 17673547 -235583036 + MIR SINE MIR 21 172 -66 2327 100 3 0 chr2 17673626 17673925 -235582658 + AluSc SINE Alu 1 300 -9 795 226 6 11 chr2 17674094 17674271 -235582312 + MER97a DNA MER1_type? 2 177 -717 235 322 16 0 chr2 17674372 17674457 -235582126 + MIR SINE MIR 60 146 -62 21 0 0 0 chr2 17674480 17674501 -235582082 + AT_rich Low_complexity Low_complexity 1 21 0 182 304 0 0 chr2 17675232 17675288 -235581295 + L2 LINE L2 3009 3064 -208 229 333 67 0 chr2 17675508 17675628 -235580955 - L2 LINE L2 -20 3293 3166 226 167 0 0 chr2 17675672 17675708 -235580875 + MER91 DNA MER1_type 105 140 0 1733 138 4 54 chr2 17675942 17676240 -235580343 - AluJb SINE Alu 0 305 22 408 40 0 0 chr2 17676654 17676704 -235579879 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 1777 187 81 35 chr2 17676707 17677103 -235579480 - MLT2B1 LTR ERVL -105 415 2 652 215 130 35 chr2 17677128 17677328 -235579255 - MIR SINE MIR -32 230 12 195 139 0 0 chr2 17677641 17677677 -235578906 + (TG)n Simple_repeat Simple_repeat 2 37 0 1896 153 0 52 chr2 17677910 17678237 -235578346 - AluJb SINE Alu -2 310 1 331 274 16 48 chr2 17678240 17678364 -235578219 - MIR SINE MIR -114 148 29 374 250 62 44 chr2 17678694 17678854 -235577729 - MIR SINE MIR -21 241 79 2118 128 3 3 chr2 17679172 17679476 -235577107 + AluSx SINE Alu 1 304 -8 605 298 110 21 chr2 17681161 17681667 -235574916 + L1ME4a LINE L1 5269 5843 -278 490 344 0 7 chr2 17681843 17681997 -235574586 + MIR SINE MIR 35 187 -75 209 267 0 0 chr2 17682246 17682291 -235574292 + GA-rich Low_complexity Low_complexity 3 47 0 2239 99 0 0 chr2 17682699 17682991 -235573592 + AluSg1 SINE Alu 2 293 -16 193 281 0 18 chr2 17682994 17683051 -235573532 - MER5A DNA MER1_type -58 131 76 4241 117 19 56 chr2 17683055 17683772 -235572811 - LTR8 LTR ERV1 0 691 1 236 282 34 60 chr2 17684429 17684546 -235572037 - MIR SINE MIR -82 180 67 231 114 0 0 chr2 17685144 17685179 -235571404 + (TCCCC)n Simple_repeat Simple_repeat 2 36 0 326 273 10 0 chr2 17685841 17685940 -235570643 - MIR SINE MIR -87 175 76 2242 116 0 3 chr2 17686805 17687107 -235569476 - AluSx SINE Alu -9 303 3 604 220 35 14 chr2 17687279 17687420 -235569163 + MER33 DNA MER1_type 1 144 -180 727 138 59 69 chr2 17687479 17687649 -235568934 + MER33 DNA MER1_type 163 332 -2292 4970 26 0 11 chr2 17687649 17688223 -235568360 - L1PA5 LINE L1 -2 6152 5585 727 138 59 69 chr2 17688223 17688255 -235568328 + MER33 DNA MER1_type 332 363 0 189 381 0 0 chr2 17688346 17688409 -235568174 - L2 LINE L2 -202 3070 3008 219 114 0 0 chr2 17689033 17689068 -235567515 + (A)n Simple_repeat Simple_repeat 1 35 0 261 253 32 21 chr2 17689330 17689425 -235567158 + MER5A DNA MER1_type 89 184 -5 212 233 82 0 chr2 17689659 17689732 -235566851 - L2 LINE L2 -55 3258 3180 268 217 14 14 chr2 17691161 17691230 -235565353 + MIR SINE MIR 128 196 -66 329 330 41 4 chr2 17691744 17691922 -235564661 + MIR SINE MIR 5 186 -62 524 294 147 27 chr2 17693510 17694163 -235562420 - L2 LINE L2 0 3313 2580 216 77 0 26 chr2 17694513 17694552 -235562031 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2372 63 0 3 chr2 17694552 17694838 -235561745 - AluSp SINE Alu -1 323 1 516 248 113 50 chr2 17695073 17695230 -235561353 + MIR SINE MIR 6 183 -79 2313 101 0 0 chr2 17695230 17695527 -235561056 - AluSx SINE Alu -15 297 1 516 248 113 50 chr2 17695527 17695601 -235560982 + MIR SINE MIR 183 251 -11 416 333 106 40 chr2 17697100 17697118 -235559465 - L2 LINE L2 -3 3269 3254 2064 123 31 0 chr2 17697118 17697410 -235559173 - AluSq SINE Alu -12 301 1 416 333 106 40 chr2 17697410 17697664 -235558919 - L2 LINE L2 -18 3254 2979 221 224 20 0 chr2 17697782 17697831 -235558752 + L2 LINE L2 3223 3272 0 378 242 111 0 chr2 17698217 17698316 -235558267 - L2 LINE L2 -38 3275 3166 216 235 59 0 chr2 17698356 17698407 -235558176 - L2 LINE L2 -266 3047 2994 354 253 36 0 chr2 17698435 17698518 -235558065 + MIR SINE MIR 37 122 -86 271 159 0 0 chr2 17698919 17698963 -235557620 + L2 LINE L2 3193 3236 -36 1867 114 29 39 chr2 17699140 17699448 -235557135 - AluSx SINE Alu -7 305 1 2152 152 3 0 chr2 17699839 17700175 -235556408 - MER1B DNA MER1_type 0 337 1 3040 181 74 15 chr2 17700500 17701680 -235554903 - L1M4 LINE L1 -442 5978 4731 507 220 64 58 chr2 17701682 17701702 -235554881 - L1M4 LINE L1 -1806 4576 4558 1894 162 10 7 chr2 17701702 17702011 -235554572 + AluSx SINE Alu 1 310 -2 507 220 64 58 chr2 17702011 17702163 -235554420 - L1M4 LINE L1 -1824 4558 4403 2146 92 6 64 chr2 17705141 17705455 -235551128 + AluSq SINE Alu 1 296 -17 2093 116 3 7 chr2 17705838 17706130 -235550453 + AluSx SINE Alu 1 291 -21 21 0 0 0 chr2 17706388 17706409 -235550174 + AT_rich Low_complexity Low_complexity 1 21 0 307 283 0 22 chr2 17706613 17706705 -235549878 - L1MC4 LINE L1 -1339 6703 6614 315 316 0 0 chr2 17706711 17706844 -235549739 + (TATATG)n Simple_repeat Simple_repeat 3 135 0 234 286 0 10 chr2 17706845 17706943 -235549640 + L1MC4 LINE L1 6614 6710 -1332 277 291 91 2 chr2 17707215 17707521 -235549062 - L1M4 LINE L1 -3679 2703 2365 25 65 0 0 chr2 17707738 17707784 -235548799 + AT_rich Low_complexity Low_complexity 1 46 0 1641 168 32 7 chr2 17707930 17708215 -235548368 - AluSx SINE Alu -20 292 1 228 270 54 18 chr2 17708306 17708417 -235548166 - HAL1 LINE L1 -918 1589 1475 1660 226 153 38 chr2 17708431 17708919 -235547664 - L1MC5 LINE L1 -2 8040 7442 1624 156 85 14 chr2 17708919 17709202 -235547381 - AluSx SINE Alu -5 307 5 1660 226 153 38 chr2 17709202 17709477 -235547106 - L1MC5 LINE L1 -600 7442 7200 21 36 0 0 chr2 17710008 17710036 -235546547 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr2 17710790 17710812 -235545771 + AT_rich Low_complexity Low_complexity 1 22 0 457 277 186 0 chr2 17710944 17711164 -235545419 + MIR SINE MIR 2 262 0 335 299 193 25 chr2 17711237 17711434 -235545149 - MIR SINE MIR -13 249 20 239 278 165 30 chr2 17712012 17712145 -235544438 - L3 LINE CR1 -31 1546 1396 197 250 77 0 chr2 17712527 17712579 -235544004 + L2 LINE L2 3254 3309 -4 27 49 0 0 chr2 17713111 17713152 -235543431 + AT_rich Low_complexity Low_complexity 1 41 0 230 121 0 0 chr2 17713580 17713613 -235542970 - L2 LINE L2 -9 3263 3231 219 69 0 0 chr2 17714133 17714162 -235542421 + (TA)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr2 17714288 17714310 -235542273 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr2 17714785 17714826 -235541757 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr2 17715243 17715265 -235541318 + AT_rich Low_complexity Low_complexity 1 22 0 950 128 23 0 chr2 17715682 17715815 -235540768 + AluJ SINE Alu 1 136 -176 29 60 0 0 chr2 17715815 17715865 -235540718 + AT_rich Low_complexity Low_complexity 1 50 0 1037 183 0 0 chr2 17715876 17716040 -235540543 + AluJ SINE Alu 137 300 -12 23 33 0 0 chr2 17716081 17716111 -235540472 + AT_rich Low_complexity Low_complexity 1 30 0 349 308 101 6 chr2 17716342 17716501 -235540082 + L1MC4a LINE L1 5732 5905 -1903 2154 130 0 7 chr2 17718590 17718889 -235537694 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr2 17719093 17719115 -235537468 + AT_rich Low_complexity Low_complexity 1 22 0 353 286 26 7 chr2 17719556 17719710 -235536873 - L1ME LINE L1 -349 5772 5616 269 280 90 20 chr2 17719845 17719945 -235536638 - MIR SINE MIR 0 262 156 421 191 99 75 chr2 17720296 17720548 -235536035 + L1MC5 LINE L1 7603 7860 -101 448 305 210 42 chr2 17721944 17722535 -235534048 + L1ME4a LINE L1 5254 5943 -178 2363 75 0 25 chr2 17722553 17722872 -235533711 + AluY SINE Alu 1 311 0 23 78 0 0 chr2 17722941 17722992 -235533591 + AT_rich Low_complexity Low_complexity 1 51 0 313 328 79 23 chr2 17723165 17723342 -235533241 - MIR SINE MIR -44 218 32 1973 137 14 3 chr2 17723818 17724111 -235532472 - AluJb SINE Alu -16 296 1 2284 97 0 7 chr2 17724122 17724420 -235532163 - AluSg SINE Alu -14 296 1 649 340 98 3 chr2 17724420 17724717 -235531866 - L2 LINE L2 -561 2753 2429 281 266 138 0 chr2 17724718 17724812 -235531771 - L2 LINE L2 -996 2318 2212 1068 148 0 0 chr2 17726190 17726352 -235530231 - AluSg/x SINE Alu -14 298 137 341 294 92 5 chr2 17726799 17726983 -235529600 + L1MC/D LINE L1 5591 5790 -2018 811 129 14 43 chr2 17728334 17728474 -235528109 + AluSq/x SINE Alu 1 136 -176 258 308 33 22 chr2 17728827 17728918 -235527665 + MIR SINE MIR 23 114 -148 21 36 0 0 chr2 17729528 17729556 -235527027 + AT_rich Low_complexity Low_complexity 1 28 0 341 345 111 34 chr2 17729598 17729833 -235526750 - L2 LINE L2 -10 3262 3010 24 0 0 0 chr2 17730922 17730946 -235525637 + GC_rich Low_complexity Low_complexity 1 24 0 229 188 0 0 chr2 17732343 17732391 -235524192 + Charlie7 DNA MER1_type 58 105 -2507 216 329 13 13 chr2 17732534 17732610 -235523973 + MIR SINE MIR 79 154 -108 1282 121 113 38 chr2 17732614 17732879 -235523704 - MER2 DNA MER2_type -14 331 47 501 279 134 0 chr2 17733752 17733924 -235522659 + MIR SINE MIR 44 238 -24 2544 58 0 6 chr2 17734968 17735280 -235521303 - AluY SINE Alu -1 310 1 339 278 10 10 chr2 17735450 17735547 -235521036 - MIR SINE MIR -67 141 45 212 254 34 0 chr2 17735890 17735949 -235520634 + MIR SINE MIR 99 159 -103 338 289 10 10 chr2 17736387 17736484 -235520099 + MIR SINE MIR 45 141 -67 237 235 134 8 chr2 17736729 17736848 -235519735 - L1ME4a LINE L1 -3 6118 5985 351 239 31 63 chr2 17737256 17737476 -235519107 - L1ME4a LINE L1 -298 5823 5637 857 305 81 44 chr2 17738063 17738677 -235517906 - L2 LINE L2 -410 2904 2268 539 335 53 8 chr2 17739812 17740057 -235516526 - MIR SINE MIR 0 262 7 301 287 78 35 chr2 17740710 17740825 -235515758 + MIR3 SINE MIR 73 192 -16 383 297 28 41 chr2 17741501 17741646 -235514937 + MIR3 SINE MIR 50 192 -16 2406 100 0 10 chr2 17741664 17741975 -235514608 - AluSq SINE Alu -5 308 1 182 336 33 33 chr2 17742611 17742733 -235513850 - L2 LINE L2 -220 3052 2931 441 0 0 0 chr2 17743168 17743217 -235513366 + (CA)n Simple_repeat Simple_repeat 2 50 0 251 275 27 101 chr2 17743394 17743543 -235513040 - L2 LINE L2 -636 2678 2541 * 363 300 12 0 chr2 17743515 17743650 -235512933 + MIR SINE MIR 34 169 -67 531 250 22 7 chr2 17744125 17744261 -235512322 - MIR3 SINE MIR -9 199 62 212 345 177 0 chr2 17744434 17744547 -235512036 - L2 LINE L2 -1 3271 3139 455 320 156 44 chr2 17744708 17745342 -235511241 - L2 LINE L2 0 3272 2567 311 337 0 20 chr2 17745819 17745917 -235510666 + MIR SINE MIR 28 123 -139 209 122 0 24 chr2 17746803 17746844 -235509739 + (TTA)n Simple_repeat Simple_repeat 3 42 0 283 328 34 8 chr2 17746954 17747073 -235509510 - MIR SINE MIR -82 180 59 267 152 0 0 chr2 17748445 17748491 -235508092 + T-rich Low_complexity Low_complexity 1 46 0 710 243 116 36 chr2 17748934 17749185 -235507398 + L1ME3A LINE L1 5568 5838 -332 241 262 71 63 chr2 17750719 17750845 -235505738 - MIR3 SINE MIR -81 127 1 234 282 0 14 chr2 17750863 17750934 -235505649 + L2 LINE L2 2659 2728 -586 243 242 16 0 chr2 17751001 17751063 -235505520 + L2 LINE L2 3207 3269 -3 187 178 0 67 chr2 17751133 17751178 -235505405 - L2 LINE L2 -90 3182 3141 1480 139 28 12 chr2 17751382 17751634 -235504949 + MLT1B LTR MaLR 1 256 -134 285 277 10 30 chr2 17751722 17751823 -235504760 - L1ME LINE L1 -333 5837 5739 717 140 18 0 chr2 17751823 17751937 -235504646 + MLT1B LTR MaLR 275 390 0 192 333 53 0 chr2 17752594 17752669 -235503914 + MIR SINE MIR 74 152 -110 225 297 44 11 chr2 17754112 17754203 -235502380 + MIR3 SINE MIR 64 157 -51 420 344 44 27 chr2 17754208 17754391 -235502192 - MER5A DNA MER1_type -2 187 2 295 320 64 84 chr2 17754857 17755107 -235501476 - L2 LINE L2 -24 3248 3004 211 274 14 27 chr2 17755387 17755460 -235501123 + CT-rich Low_complexity Low_complexity 1 72 0 194 318 123 45 chr2 17755518 17755672 -235500911 - MIR3 SINE MIR -28 180 15 301 185 10 205 chr2 17755944 17756086 -235500497 + MIR SINE MIR 38 151 -100 276 213 13 80 chr2 17756981 17757056 -235499527 - MIR3 SINE MIR -23 185 116 2020 141 0 0 chr2 17757165 17757462 -235499121 + AluSx SINE Alu 1 297 -15 2152 118 0 3 chr2 17757464 17757777 -235498806 + AluSx SINE Alu 1 312 0 1945 127 11 0 chr2 17758272 17758608 -235497975 + AluSx SINE Alu 1 339 0 2018 161 46 3 chr2 17758982 17759331 -235497252 - MLT1A1 LTR MaLR -1 364 1 240 326 15 44 chr2 17760789 17760925 -235495658 + MIR SINE MIR 13 143 -65 1078 197 97 13 chr2 17761727 17761955 -235494628 - MIR SINE MIR 0 262 16 407 293 29 29 chr2 17762102 17762276 -235494307 + MIR SINE MIR 9 182 -80 640 255 223 18 chr2 17762642 17762979 -235493604 + MLT1L LTR MaLR 208 613 -2 219 298 25 50 chr2 17763028 17763149 -235493434 + MIR SINE MIR 74 191 -71 297 291 0 13 chr2 17763308 17763387 -235493196 + MIR3 SINE MIR 117 194 -14 246 137 78 39 chr2 17763476 17763527 -235493056 + L2 LINE L2 3160 3212 -60 201 147 0 0 chr2 17764792 17764826 -235491757 + (CATA)n Simple_repeat Simple_repeat 3 36 0 609 271 67 2 chr2 17765107 17765294 -235491289 - MLT1J LTR MaLR -281 169 5 312 373 121 20 chr2 17766020 17766326 -235490257 - L2 LINE L2 0 3272 2936 784 301 13 4 chr2 17766909 17767154 -235489429 - MIR SINE MIR 0 262 18 294 238 131 0 chr2 17767133 17767217 -235489366 + MIR SINE MIR 59 153 -109 * 2288 183 4 73 chr2 17768025 17768594 -235487989 - LTR27 LTR ERV1 -139 497 2 355 308 8 15 chr2 17768726 17768859 -235487724 + L1ME4a LINE L1 4491 4622 -1524 2257 107 0 0 chr2 17769094 17769402 -235487181 - AluSg SINE Alu -2 308 1 335 297 97 16 chr2 17769470 17769655 -235486928 + L1ME4a LINE L1 4970 5169 -977 296 260 53 53 chr2 17769985 17770135 -235486448 + L1ME4a LINE L1 5764 5913 -208 207 0 0 0 chr2 17770200 17770223 -235486360 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1630 133 68 0 chr2 17770227 17770491 -235486092 - AluSx SINE Alu -30 282 1 261 244 174 0 chr2 17770492 17770578 -235486005 + L2 LINE L2 3212 3312 -1 2135 106 6 13 chr2 17770609 17770921 -235485662 - AluSg SINE Alu 0 310 1 1699 148 0 80 chr2 17771196 17771310 -235485273 + AluSx SINE Alu 3 125 -187 2457 103 59 0 chr2 17771310 17771650 -235484933 - THE1B LTR MaLR -4 360 1 1699 148 0 80 chr2 17771650 17771859 -235484724 + AluSx SINE Alu 125 300 -12 206 289 0 0 chr2 17771915 17771960 -235484623 - L2 LINE L2 -6 3307 3263 246 286 54 54 chr2 17772163 17772331 -235484252 - L2 LINE L2 -207 3065 2898 906 178 14 0 chr2 17772547 17772693 -235483890 + MER45A DNA AcHobo 31 178 0 237 211 0 0 chr2 17773268 17773320 -235483263 + (CA)n Simple_repeat Simple_repeat 2 53 0 466 228 167 31 chr2 17773867 17774029 -235482554 + MIR SINE MIR 23 206 -56 182 211 14 113 chr2 17774325 17774396 -235482187 - MER5B DNA MER1_type -78 100 37 1051 185 48 81 chr2 17774810 17775145 -235481438 + MER33 DNA MER1_type 1 324 0 367 271 16 49 chr2 17775218 17775340 -235481243 - MIR3 SINE MIR -2 206 89 205 264 97 0 chr2 17775968 17776040 -235480543 + MER5A DNA MER1_type 28 106 -83 226 190 203 51 chr2 17776087 17776166 -235480417 + L2 LINE L2 3166 3256 -16 900 252 48 0 chr2 17776477 17776687 -235479896 + MIR SINE MIR 38 257 -5 346 306 69 7 chr2 17776732 17776876 -235479707 - MIR3 SINE MIR -6 202 50 186 293 85 37 chr2 17777753 17777835 -235478748 + L2 LINE L2 3181 3266 -6 241 280 0 127 chr2 17778264 17778289 -235478294 - MIR SINE MIR -118 144 117 2122 120 0 13 chr2 17778289 17778605 -235477978 + AluSx SINE Alu 1 312 0 241 280 0 127 chr2 17778605 17778729 -235477854 - MIR SINE MIR -145 117 14 1719 78 47 0 chr2 17779019 17779276 -235477307 - L1MA5 LINE L1 0 6300 6032 241 293 6 52 chr2 17780005 17780179 -235476404 + (CAGAGA)n Simple_repeat Simple_repeat 3 168 0 299 365 16 24 chr2 17780306 17780432 -235476151 - MIR3 SINE MIR 0 208 84 2343 77 0 0 chr2 17780632 17780930 -235475653 - AluY SINE Alu -13 298 1 508 275 23 15 chr2 17781847 17781978 -235474605 - L2 LINE L2 0 3272 3141 211 294 71 12 chr2 17782891 17782976 -235473607 + MIR SINE MIR 20 109 -153 324 218 92 11 chr2 17784432 17784519 -235472064 + L2 LINE L2 3179 3272 0 367 301 74 49 chr2 17784740 17784903 -235471680 + MIR SINE MIR 38 204 -58 180 200 0 0 chr2 17784904 17784944 -235471639 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 420 143 24 12 chr2 17786352 17786436 -235470147 + MLT1G1 LTR MaLR 511 595 0 329 337 117 17 chr2 17788392 17788802 -235467781 + L2 LINE L2 2841 3291 -22 334 330 85 5 chr2 17788836 17789024 -235467559 - MLT1K LTR MaLR -346 242 40 1881 218 185 2 chr2 17789517 17790036 -235466547 - MER90 LTR ERV1 0 614 1 572 280 35 43 chr2 17790089 17790435 -235466148 - L1MEc LINE L1 -5515 881 539 1088 296 30 26 chr2 17790463 17790922 -235465661 - L2 LINE L2 -1100 2214 1754 373 278 53 27 chr2 17791091 17791381 -235465202 - L1MEc LINE L1 -5986 410 100 1521 204 110 37 chr2 17792039 17792528 -235464055 - L1MB7 LINE L1 0 6184 5660 214 364 16 16 chr2 17792829 17792950 -235463633 + L2 LINE L2 2343 2463 -851 29 60 0 0 chr2 17793067 17793117 -235463466 + GC_rich Low_complexity Low_complexity 1 50 0 1516 213 111 35 chr2 17793830 17794318 -235462265 - L1MB7 LINE L1 0 6184 5660 293 333 15 15 chr2 17794619 17794751 -235461832 + L2 LINE L2 2343 2474 -840 365 305 102 0 chr2 17794977 17795095 -235461488 - L2 LINE L2 -5 3308 3179 414 0 0 0 chr2 17795569 17795615 -235460968 + (CA)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr2 17796312 17796333 -235460250 + AT_rich Low_complexity Low_complexity 1 21 0 721 206 120 11 chr2 17796831 17797015 -235459568 + MER3 DNA MER1_type 1 204 -5 224 263 32 53 chr2 17797425 17797520 -235459063 - L2 LINE L2 0 3313 3221 729 217 46 57 chr2 17798234 17798736 -235457847 - MLT1G LTR MaLR -4 538 1 330 266 69 113 chr2 17798755 17799090 -235457493 - MLT1G-int LTR MaLR -24 1347 1028 300 363 14 7 chr2 17799662 17799808 -235456775 - MLT1G-int LTR MaLR -832 539 393 575 278 115 44 chr2 17799999 17800529 -235456054 - MLT1G LTR MaLR -4 551 1 1785 152 28 3 chr2 17800863 17801153 -235455430 - AluSx SINE Alu -15 297 1 556 165 41 72 chr2 17801275 17801469 -235455114 + Charlie1 DNA MER1_type 55 242 -2519 2288 113 7 0 chr2 17801473 17801783 -235454800 + AluSx SINE Alu 1 312 0 384 174 284 9 chr2 17801783 17801887 -235454696 + Charlie1 DNA MER1_type 2627 2760 -1 752 229 63 23 chr2 17801957 17802170 -235454413 - L1MDa LINE L1 -5764 776 420 461 219 24 65 chr2 17802179 17802302 -235454281 - L1MDa LINE L1 -6014 526 409 852 200 0 7 chr2 17802999 17803144 -235453439 - MLT1D LTR MaLR -50 455 312 2764 257 38 76 chr2 17803613 17804183 -235452400 + L1M4 LINE L1 3180 3770 -2376 383 204 39 29 chr2 17804183 17804286 -235452297 + MER2 DNA MER2_type 2 105 -240 2764 257 38 76 chr2 17804286 17804965 -235451618 + L1M4 LINE L1 3770 4399 -1747 5634 138 37 8 chr2 17804965 17805859 -235450724 + L1MC1 LINE L1 5414 6333 0 2764 257 38 76 chr2 17805859 17806124 -235450459 + L1M4 LINE L1 4399 4673 -1473 2140 147 125 2 chr2 17806124 17806547 -235450036 + L1MD1 LINE L1 5768 6242 0 210 333 69 40 chr2 17806758 17806932 -235449651 - MIR SINE MIR -21 241 63 1082 157 15 35 chr2 17807130 17807327 -235449256 + MER20 DNA MER1_type 24 216 -3 2231 104 16 3 chr2 17808396 17808704 -235447879 - AluSx SINE Alu 0 312 1 658 75 9 9 chr2 17809347 17809454 -235447129 + (TG)n Simple_repeat Simple_repeat 2 108 0 534 135 10 52 chr2 17809459 17809555 -235447028 - FRAM SINE Alu -30 146 55 2219 93 6 16 chr2 17809769 17810081 -235446502 - AluY SINE Alu -2 309 1 279 54 0 0 chr2 17810704 17810741 -235445842 + (TA)n Simple_repeat Simple_repeat 2 38 0 243 0 0 0 chr2 17810741 17810768 -235445815 + (TG)n Simple_repeat Simple_repeat 1 27 0 1841 161 4 0 chr2 17810768 17811048 -235445535 - AluSx SINE Alu -31 281 1 1530 202 17 0 chr2 17811630 17811917 -235444666 + AluJo SINE Alu 1 292 -20 226 348 11 0 chr2 17812577 17812666 -235443917 + (TG)n Simple_repeat Simple_repeat 2 91 0 311 129 0 16 chr2 17813050 17813112 -235443471 - L1MA4A LINE L1 -295 6008 5948 287 327 103 6 chr2 17813345 17813501 -235443082 - MIR SINE MIR -24 238 68 240 275 79 87 chr2 17814873 17814933 -235441650 - L2 LINE L2 -411 2903 2844 4867 26 0 0 chr2 17814933 17815462 -235441121 + L1PA5 LINE L1 5626 6154 0 324 0 0 0 chr2 17815462 17815498 -235441085 + (TA)n Simple_repeat Simple_repeat 2 37 0 240 275 79 87 chr2 17815498 17815792 -235440791 - L2 LINE L2 -468 2846 2551 22 0 0 0 chr2 17816159 17816181 -235440402 + AT_rich Low_complexity Low_complexity 1 22 0 1750 216 43 54 chr2 17816591 17817053 -235439530 - MLT2C2 LTR ERVL -7 457 1 263 140 0 0 chr2 17817189 17817239 -235439344 + Alu SINE Alu 251 300 0 718 122 8 8 chr2 17817861 17817992 -235438591 + (TCCA)n Simple_repeat Simple_repeat 1 131 0 23 0 0 0 chr2 17818270 17818293 -235438290 + AT_rich Low_complexity Low_complexity 1 23 0 6156 125 10 28 chr2 17818313 17818678 -235437905 - L1PB1 LINE L1 0 6867 6497 471 60 0 0 chr2 17818678 17818745 -235437838 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 6156 125 10 28 chr2 17818745 17819661 -235436922 - L1PB1 LINE L1 -370 6497 5614 648 38 0 0 chr2 17819661 17819741 -235436842 + L1PA5 LINE L1 5990 6069 -85 960 274 150 32 chr2 17819996 17820649 -235435934 - L1MEd LINE L1 -4894 1225 496 204 269 45 0 chr2 17821340 17821407 -235435176 - MIR SINE MIR -71 191 122 331 241 65 9 chr2 17822767 17822875 -235433708 + MIR SINE MIR 69 182 -80 2505 87 67 17 chr2 17823474 17823831 -235432752 + THE1C LTR MaLR 1 375 0 1644 230 8 37 chr2 17823986 17824360 -235432223 - MLT1A1 LTR MaLR 0 365 3 1731 174 0 17 chr2 17824631 17824929 -235431654 + AluJo SINE Alu 2 294 -18 1391 170 134 48 chr2 17825206 17825542 -235431041 + MLT1A1 LTR MaLR 1 365 0 1929 145 20 7 chr2 17825752 17826049 -235430534 + AluSx SINE Alu 4 304 -8 828 122 17 0 chr2 17826991 17827106 -235429477 + AluJ SINE Alu 14 130 -182 2078 132 0 0 chr2 17827116 17827397 -235429186 + AluJb SINE Alu 1 281 -31 225 0 0 0 chr2 17827648 17827673 -235428910 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1011 150 22 33 chr2 17828057 17828209 -235428374 + AluJ SINE Alu 123 274 -38 2802 104 0 29 chr2 17828209 17828251 -235428332 - THE1B LTR MaLR 0 364 322 2444 73 0 3 chr2 17828251 17828552 -235428031 + AluY SINE Alu 1 300 -11 2802 104 0 29 chr2 17828552 17828884 -235427699 - THE1B LTR MaLR -42 322 1 1011 150 22 33 chr2 17828884 17828911 -235427672 + AluJ SINE Alu 274 300 -12 396 0 0 0 chr2 17829141 17829185 -235427398 + (TA)n Simple_repeat Simple_repeat 1 44 0 13627 191 81 7 chr2 17829187 17831975 -235424608 - L1PB1 LINE L1 -1241 5621 3042 183 42 0 0 chr2 17831975 17831999 -235424584 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 13627 191 81 7 chr2 17831999 17834437 -235422146 - L1PB1 LINE L1 -3820 3042 6 234 0 0 0 chr2 17834452 17834478 -235422105 + (T)n Simple_repeat Simple_repeat 1 26 0 24 0 0 0 chr2 17835511 17835535 -235421048 + AT_rich Low_complexity Low_complexity 1 24 0 344 366 105 16 chr2 17836242 17836544 -235420039 - L2 LINE L2 -222 3050 2702 1729 160 16 35 chr2 17836546 17836864 -235419719 - AluJo SINE Alu 0 312 1 633 209 0 22 chr2 17837442 17837624 -235418959 + GA-rich Low_complexity Low_complexity 1 178 0 198 71 0 0 chr2 17838571 17838599 -235417984 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2106 113 3 10 chr2 17838653 17838954 -235417629 - AluSx SINE Alu -13 299 1 318 310 32 10 chr2 17839794 17839913 -235416670 + MIR SINE MIR 16 144 -64 430 261 127 30 chr2 17839959 17840038 -235416545 + MIR SINE MIR 63 133 -129 1454 262 47 33 chr2 17840038 17840550 -235416033 + LTR53 LTR ERVL 1 519 0 430 261 127 30 chr2 17840550 17840635 -235415948 + MIR SINE MIR 133 243 -19 231 327 127 0 chr2 17841043 17841153 -235415430 + MIR3 SINE MIR 33 156 -52 * 268 243 19 87 chr2 17841151 17841254 -235415329 - L2 LINE L2 -31 3241 3146 981 276 56 43 chr2 17841341 17841787 -235414796 + MLT1J LTR MaLR 1 452 -59 242 302 31 10 chr2 17842725 17842821 -235413762 - L2 LINE L2 -24 3289 3192 2345 110 0 0 chr2 17843176 17843485 -235413098 + AluSg SINE Alu 1 309 -1 2658 39 0 0 chr2 17843657 17843962 -235412621 + AluY SINE Alu 1 305 -6 1343 191 135 28 chr2 17843984 17844309 -235412274 + MLT1A1 LTR MaLR 6 365 0 188 294 29 0 chr2 17844498 17844566 -235412017 + MIR SINE MIR 121 190 -72 200 186 47 0 chr2 17846028 17846071 -235410512 - L2 LINE L2 -85 3187 3143 312 245 10 59 chr2 17846369 17846471 -235410112 - L1MEd LINE L1 -5538 581 485 804 145 0 0 chr2 17847666 17847811 -235408772 + (TCCA)n Simple_repeat Simple_repeat 3 147 0 180 0 0 0 chr2 17848225 17848245 -235408338 + (CAT)n Simple_repeat Simple_repeat 3 22 0 2271 112 0 3 chr2 17849519 17849824 -235406759 - AluSx SINE Alu -8 304 1 415 90 0 45 chr2 17849847 17849914 -235406669 - MLT1A1 LTR MaLR -300 65 2 1761 151 191 38 chr2 17850151 17850543 -235406040 - LTR47A LTR ERVL 0 452 1 2419 124 32 5 chr2 17850607 17850987 -235405596 + L1PA16 LINE L1 5768 6157 -9 933 226 43 0 chr2 17851139 17851325 -235405258 - MER63A DNA MER1_type -16 194 1 1736 178 4 0 chr2 17851636 17851911 -235404672 + AluJo SINE Alu 2 277 -35 198 0 0 0 chr2 17851911 17851933 -235404650 + (GAAAA)n Simple_repeat Simple_repeat 4 25 0 655 215 11 11 chr2 17851935 17852112 -235404471 + GA-rich Low_complexity Low_complexity 2 178 0 237 274 0 0 chr2 17852112 17852163 -235404420 + polypurine Low_complexity Low_complexity 3 53 0 197 378 67 0 chr2 17852288 17852407 -235404176 + MIR3 SINE MIR 56 182 -26 3508 103 10 12 chr2 17852805 17853243 -235403340 + L1PB2 LINE L1 5664 6102 -49 2750 91 10 58 chr2 17853243 17853637 -235402946 - THE1C LTR MaLR 0 375 1 3508 103 10 12 chr2 17853637 17853685 -235402898 + L1PB2 LINE L1 6102 6149 -2 811 255 19 14 chr2 17853690 17853906 -235402677 + MER58B DNA MER1_type 122 338 -3 1969 176 29 11 chr2 17854033 17854413 -235402170 + L1PA16 LINE L1 5743 6129 -37 334 247 0 26 chr2 17854717 17854794 -235401789 + L2 LINE L2 3196 3270 -2 334 293 80 25 chr2 17855247 17855420 -235401163 + MIR SINE MIR 5 184 -65 219 36 0 0 chr2 17856253 17856281 -235400302 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2101 146 0 3 chr2 17856533 17856842 -235399741 - AluSx SINE Alu -4 308 1 622 239 48 32 chr2 17856934 17857122 -235399461 + LTR40b LTR ERVL 272 462 0 702 202 22 165 chr2 17857428 17857700 -235398883 + MIR SINE MIR 4 236 -26 563 255 54 13 chr2 17858418 17858567 -235398016 - MIR SINE MIR -88 174 20 231 307 51 88 chr2 17858600 17858737 -235397846 + L2 LINE L2 3140 3271 -1 263 286 33 104 chr2 17860389 17860519 -235396064 - MIR SINE MIR -38 170 55 2114 119 3 3 chr2 17860519 17860804 -235395779 + AluSx SINE Alu 1 285 -27 263 286 33 104 chr2 17860804 17860855 -235395728 - MIR SINE MIR -153 55 2 706 281 106 0 chr2 17861188 17861405 -235395178 - MIR SINE MIR -12 250 11 1822 216 92 15 chr2 17861480 17861948 -235394635 + MLT1D LTR MaLR 1 504 -1 293 365 36 16 chr2 17862066 17862258 -235394325 + L3b LINE CR1 1177 1372 -211 872 233 45 29 chr2 17862450 17862759 -235393824 + L1MC5 LINE L1 7618 7931 -30 325 222 0 48 chr2 17862760 17862927 -235393656 + GA-rich Low_complexity Low_complexity 1 159 0 2700 136 64 5 chr2 17862977 17863381 -235393202 - MSTA LTR MaLR 0 428 1 180 83 0 0 chr2 17863408 17863432 -235393151 + MIR SINE MIR 124 147 -115 286 253 0 13 chr2 17864191 17864266 -235392317 - MER116 DNA Mariner -1 79 6 220 139 0 0 chr2 17864794 17864830 -235391753 + L2 LINE L2 3016 3051 -221 513 239 91 35 chr2 17865970 17866157 -235390426 + MIR SINE MIR 3 195 -63 185 224 17 0 chr2 17866168 17866226 -235390357 + (TTA)n Simple_repeat Simple_repeat 1 59 0 281 301 36 24 chr2 17870414 17870497 -235386086 - MIR SINE MIR -167 95 12 2490 123 103 5 chr2 17870671 17871061 -235385522 + MSTA LTR MaLR 1 428 0 254 324 150 30 chr2 17871103 17871436 -235385147 - L2 LINE L2 -481 2833 2461 620 236 56 38 chr2 17871593 17871736 -235384847 + L1MB8 LINE L1 3115 3254 -2892 1716 156 0 18 chr2 17871736 17872019 -235384564 + AluSx SINE Alu 33 310 -2 620 236 56 38 chr2 17872019 17872163 -235384420 + L1MB8 LINE L1 3254 3407 -2739 3222 119 3 108 chr2 17872194 17872473 -235384110 - MER4B LTR ERV1 -36 574 267 2110 155 62 6 chr2 17872473 17872827 -235383756 + THE1C LTR MaLR 1 374 -1 10924 115 7 46 chr2 17872829 17874473 -235382110 + THE1C-int LTR MaLR 2 1580 0 2323 123 56 8 chr2 17874473 17874831 -235381752 + THE1C LTR MaLR 1 375 0 3222 119 3 108 chr2 17874831 17875188 -235381395 - MER4B LTR ERV1 -342 268 1 4857 212 40 16 chr2 17875188 17876403 -235380180 + L1MB8 LINE L1 3406 4649 -1497 3486 175 84 46 chr2 17876462 17877781 -235378802 + L1MB8 LINE L1 4819 6178 0 683 143 0 0 chr2 17877789 17877880 -235378703 + FLAM_C SINE Alu 28 118 -25 26 0 0 0 chr2 17877886 17877912 -235378671 + AT_rich Low_complexity Low_complexity 1 26 0 793 212 148 116 chr2 17877926 17878316 -235378267 + L1MC5 LINE L1 7127 7503 -458 229 65 0 0 chr2 17878316 17878362 -235378221 - LTR66 LTR ERVL -171 439 394 793 212 148 116 chr2 17878362 17878399 -235378184 + L1MC5 LINE L1 7503 7537 -424 1955 156 167 16 chr2 17878399 17878771 -235377812 + MSTA LTR MaLR 1 428 0 793 212 148 116 chr2 17878771 17879072 -235377511 + L1MC5 LINE L1 7537 7926 -35 291 268 24 12 chr2 17879142 17879224 -235377359 + L2 LINE L2 3190 3272 0 226 296 148 9 chr2 17879231 17879339 -235377244 - MIR SINE MIR -74 188 66 219 287 103 35 chr2 17880753 17880840 -235375743 + MIR SINE MIR 19 111 -97 883 208 35 55 chr2 17881861 17881927 -235374656 - AluJb SINE Alu -113 199 133 2067 156 0 0 chr2 17881927 17882228 -235374355 - AluSx SINE Alu -11 301 1 883 208 35 55 chr2 17882228 17882363 -235374220 - AluJb SINE Alu -179 133 2 410 227 154 9 chr2 17882515 17882625 -235373958 - L2 LINE L2 -1 3312 3187 1471 163 21 4 chr2 17882642 17882881 -235373702 + AluJo SINE Alu 1 243 -69 37 0 0 0 chr2 17884647 17884684 -235371899 + AT_rich Low_complexity Low_complexity 1 37 0 1559 155 41 31 chr2 17884708 17884998 -235371585 - AluSx SINE Alu -19 293 1 2270 115 3 0 chr2 17886560 17886864 -235369719 + AluSx SINE Alu 1 305 -7 376 100 0 33 chr2 17887134 17887194 -235369389 + MER5B DNA MER1_type 1 58 -120 973 161 42 7 chr2 17887973 17888185 -235368398 - L1MD3 LINE L1 0 7995 7577 2338 102 0 0 chr2 17888869 17889174 -235367409 - AluSx SINE Alu -7 305 1 2317 82 0 41 chr2 17890677 17890992 -235365591 + AluSq SINE Alu 1 302 -11 318 367 30 30 chr2 17891391 17891560 -235365023 - MIR3 SINE MIR -37 171 3 610 189 63 24 chr2 17891655 17891782 -235364801 + MER3 DNA MER1_type 13 144 -65 216 341 8 41 chr2 17892065 17892188 -235364395 - L3 LINE CR1 -130 1447 1329 984 167 107 38 chr2 17892321 17892543 -235364040 + MER33 DNA MER1_type 44 288 -2297 2032 142 0 3 chr2 17892543 17892839 -235363744 + AluSx SINE Alu 1 295 -17 984 167 107 38 chr2 17892839 17892879 -235363704 + MER33 DNA MER1_type 288 324 0 687 124 0 50 chr2 17893031 17893152 -235363431 - FLAM_C SINE Alu -1 142 28 1929 145 7 0 chr2 17893157 17893439 -235363144 - AluJb SINE Alu -28 284 1 3195 88 4 77 chr2 17893999 17894477 -235362106 - MLT2A1 LTR ERVL 0 444 2 305 260 70 40 chr2 17894667 17894767 -235361816 - MIR3 SINE MIR -102 106 4 1987 162 0 0 chr2 17895478 17895781 -235360802 - AluSx SINE Alu -3 309 7 28 29 0 0 chr2 17897453 17897488 -235359095 + AT_rich Low_complexity Low_complexity 1 35 0 436 319 194 53 chr2 17897766 17899569 -235357014 - L2 LINE L2 -2 3270 1220 22 0 0 0 chr2 17899650 17899672 -235356911 + AT_rich Low_complexity Low_complexity 1 22 0 1734 81 0 0 chr2 17899684 17899893 -235356690 + AluSc SINE Alu 86 294 -15 303 243 0 0 chr2 17900682 17900752 -235355831 + MER116 DNA Mariner 2 71 -9 642 136 0 0 chr2 17901385 17901488 -235355095 - L1MB8 LINE L1 -1 6177 6075 248 191 0 0 chr2 17901491 17901533 -235355050 - L1M4b LINE L1 -6816 43 2 190 336 44 44 chr2 17902142 17902255 -235354328 + L2 LINE L2 3198 3310 -3 577 263 8 0 chr2 17902391 17902524 -235354059 + MER58B DNA MER1_type 206 339 -2 330 358 12 18 chr2 17902863 17903028 -235353555 + L2 LINE L2 2933 3096 -176 180 158 0 0 chr2 17903209 17903247 -235353336 + (TTATA)n Simple_repeat Simple_repeat 4 41 0 1678 178 7 13 chr2 17903584 17903893 -235352690 - AluJb SINE Alu -5 307 1 2191 99 0 10 chr2 17903900 17904203 -235352380 - AluSg SINE Alu -10 300 1 237 191 43 0 chr2 17904995 17905042 -235351541 - MER66A LTR ERV1 -147 331 283 207 176 0 0 chr2 17905736 17905770 -235350813 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 215 255 20 0 chr2 17905884 17905935 -235350648 + L3 LINE CR1 1521 1572 -5 1713 158 13 28 chr2 17907199 17907516 -235349067 + AluSx SINE Alu 1 312 0 974 229 28 47 chr2 17908106 17908359 -235348224 + MIR SINE MIR 2 249 -13 258 232 14 0 chr2 17908431 17908500 -235348083 + (TA)n Simple_repeat Simple_repeat 1 70 0 285 272 193 0 chr2 17909216 17909330 -235347253 - L2 LINE L2 -782 2532 2397 268 311 172 0 chr2 17910749 17910929 -235345654 + L2 LINE L2 1894 2104 -1210 1725 174 17 0 chr2 17911025 17911318 -235345265 + AluJb SINE Alu 3 300 -12 2076 288 180 12 chr2 17912038 17913166 -235343417 + L2 LINE L2 1735 3052 -261 581 249 133 25 chr2 17914541 17914782 -235341801 - L2 LINE L2 -1 3312 3046 1720 173 31 0 chr2 17915095 17915384 -235341199 - AluSx SINE Alu -14 298 1 2186 112 0 16 chr2 17915390 17915704 -235340879 - AluSx SINE Alu -3 309 1 477 186 153 8 chr2 17915963 17916087 -235340496 - MER104 DNA Tc2 -38 142 1 1188 138 53 0 chr2 17916656 17916844 -235339739 - Tigger2a DNA MER2_type -3 431 234 1504 134 29 12 chr2 17916910 17917156 -235339427 - Tigger2a DNA MER2_type -183 251 2 21 0 0 0 chr2 17917523 17917544 -235339039 + AT_rich Low_complexity Low_complexity 1 21 0 1518 222 109 17 chr2 17917608 17917737 -235338846 - Charlie1b DNA MER1_type -2239 522 406 2035 125 44 36 chr2 17917737 17918098 -235338485 - THE1B LTR MaLR 0 364 1 1518 222 109 17 chr2 17918098 17918446 -235338137 - Charlie1b DNA MER1_type -2355 406 1 381 311 0 10 chr2 17919403 17919506 -235337077 - L2 LINE L2 -12 3301 3200 1973 120 11 7 chr2 17919608 17919929 -235336654 - AluSq SINE Alu 0 322 1 2016 197 113 2 chr2 17920986 17922312 -235334271 + L1MDa LINE L1 1429 2898 -3642 3870 175 100 1 chr2 17922384 17923246 -235333337 - L1MB7 LINE L1 -17 6167 5221 342 264 13 110 chr2 17923469 17923624 -235332959 - L1MB7 LINE L1 -1973 4173 4034 257 234 60 54 chr2 17923629 17923813 -235332770 - L1MEc LINE L1 -4180 2216 2032 259 257 91 27 chr2 17925817 17925977 -235330606 + L1ME LINE L1 5367 5534 -587 465 312 42 8 chr2 17926002 17926143 -235330440 + MIR SINE MIR 21 162 -46 2440 132 75 30 chr2 17926273 17926701 -235329882 - L1MA4A LINE L1 -29 6274 5824 2160 121 0 13 chr2 17926701 17927015 -235329568 - AluSq SINE Alu -3 310 1 2440 132 75 30 chr2 17927015 17927027 -235329556 - L1MA4A LINE L1 -479 5824 5814 7016 32 1 0 chr2 17927033 17928566 -235328017 - L1PA4 LINE L1 0 6155 4599 1153 134 45 25 chr2 17928676 17928877 -235327706 - MER2 DNA MER2_type -139 206 2 638 191 20 14 chr2 17928969 17929116 -235327467 - L1MC4 LINE L1 -138 7904 7757 1323 265 38 36 chr2 17929206 17929678 -235326905 - L1MC4 LINE L1 -502 7540 7068 937 149 0 0 chr2 17929929 17930077 -235326506 - AluJb SINE Alu -18 294 147 1265 273 102 39 chr2 17930086 17930547 -235326036 - L1MC4a LINE L1 -889 7155 6666 1593 220 92 96 chr2 17930581 17931418 -235325165 - L1MC4a LINE L1 -1447 6597 5764 2394 101 90 3 chr2 17931418 17931785 -235324798 - Tigger4(Zombi) DNA MER2_type 0 2731 2333 1294 153 0 100 chr2 17931807 17932019 -235324564 - Tigger4(Zombi) DNA MER2_type -2507 224 39 1923 133 0 20 chr2 17932019 17932312 -235324271 - AluSx SINE Alu -25 287 1 1294 153 0 100 chr2 17932312 17932348 -235324235 - Tigger4(Zombi) DNA MER2_type -2692 39 1 507 270 100 104 chr2 17932491 17932983 -235323600 - L1MC4a LINE L1 -751 5631 5142 231 289 0 26 chr2 17933061 17933137 -235323446 - L1MC4a LINE L1 -4739 1645 1572 396 292 96 55 chr2 17933186 17933477 -235323106 - HAL1 LINE L1 -1129 1378 1076 189 0 0 0 chr2 17933650 17933671 -235322912 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1825 169 3 10 chr2 17933674 17933964 -235322619 - AluJo SINE Alu -24 288 1 236 361 116 7 chr2 17935003 17935158 -235321425 - L3 LINE CR1 -5 1572 1401 461 222 111 26 chr2 17935233 17935350 -235321233 + L2 LINE L2 3187 3313 0 1221 263 22 3 chr2 17935724 17936036 -235320547 - L1MC4a LINE L1 -5696 867 550 777 100 67 0 chr2 17936237 17936357 -235320226 + Tigger1 DNA MER2_type 1626 1753 -665 354 179 39 13 chr2 17936367 17936445 -235320138 - L1MC4a LINE L1 -6261 302 223 10345 124 25 5 chr2 17936539 17938126 -235318457 + Tigger1 DNA MER2_type 1 1618 -800 789 146 0 8 chr2 17938126 17938249 -235318334 + Tigger1 DNA MER2_type 2294 2415 -3 1337 175 100 65 chr2 17938598 17939027 -235317556 + L1MC4 LINE L1 6715 7158 -884 281 281 48 14 chr2 17939315 17939461 -235317122 - L1ME4a LINE L1 -3 6118 5968 1942 147 0 43 chr2 17939694 17940020 -235316563 - AluJo SINE Alu 0 312 1 2528 227 19 20 chr2 17941334 17942029 -235314554 + L1M4 LINE L1 4027 4720 -1426 283 169 84 0 chr2 17942022 17942093 -235314490 + L1MA10 LINE L1 6256 6332 -2 * 2697 263 84 30 chr2 17942141 17944473 -235312110 + L1ME3 LINE L1 863 3458 -2968 2362 85 3 10 chr2 17944637 17944943 -235311640 + AluSp SINE Alu 1 304 -9 1614 248 138 43 chr2 17944971 17946036 -235310547 + L1ME3 LINE L1 5231 6395 -47 25 31 0 0 chr2 17946483 17946515 -235310068 + AT_rich Low_complexity Low_complexity 1 32 0 45 79 0 0 chr2 17946757 17946858 -235309725 + AT_rich Low_complexity Low_complexity 1 101 0 1474 133 8 52 chr2 17946872 17947121 -235309462 - AluJb SINE Alu -8 304 67 1076 162 0 12 chr2 17947582 17947749 -235308834 + AluSc SINE Alu 125 289 -20 260 267 67 42 chr2 17948690 17948855 -235307728 + MIR SINE MIR 94 262 0 205 240 150 20 chr2 17949852 17949952 -235306631 + L2 LINE L2 2952 3064 -249 42 65 0 0 chr2 17950010 17950087 -235306496 + AT_rich Low_complexity Low_complexity 1 77 0 322 333 63 53 chr2 17950248 17950533 -235306050 + MARNA DNA Mariner 105 392 -194 247 321 37 0 chr2 17950645 17950726 -235305857 - MIR SINE MIR -177 85 2 2013 157 0 6 chr2 17950736 17951049 -235305534 - AluSx SINE Alu 0 312 2 1513 213 7 10 chr2 17951618 17951919 -235304664 - AluJo SINE Alu -12 300 1 182 238 24 0 chr2 17952586 17952628 -235303955 - L2 LINE L2 -10 3303 3261 250 232 122 0 chr2 17953930 17954012 -235302571 - HsTC2 DNA Tc2 -1806 92 1 619 275 161 45 chr2 17955830 17956063 -235300520 - L2 LINE L2 0 3313 3108 2135 97 0 14 chr2 17956063 17956382 -235300201 - AluSx SINE Alu 0 315 1 619 275 161 45 chr2 17956382 17956951 -235299632 - L2 LINE L2 -205 3108 2398 428 330 59 14 chr2 17957622 17957843 -235298740 - Charlie8 DNA MER1_type -2183 234 4 270 267 128 0 chr2 17959288 17959374 -235297209 - L2 LINE L2 -8 3264 3168 287 122 27 27 chr2 17959683 17959757 -235296826 + CT-rich Low_complexity Low_complexity 3 76 0 399 291 133 14 chr2 17960350 17960560 -235296023 - MIR SINE MIR 0 262 28 1049 200 9 36 chr2 17962106 17962331 -235294252 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr2 17962934 17962958 -235293625 + AT_rich Low_complexity Low_complexity 1 24 0 714 274 103 4 chr2 17963829 17964088 -235292495 + L1ME LINE L1 5558 5844 -297 550 323 35 13 chr2 17964097 17964329 -235292254 - MIR SINE MIR -24 238 2 227 246 193 29 chr2 17964390 17964561 -235292022 + L1ME4a LINE L1 5902 6100 -21 937 203 44 22 chr2 17965625 17965852 -235290731 + Charlie4 DNA MER1_type 17 248 -1713 706 231 65 19 chr2 17967591 17967807 -235288776 + MIR SINE MIR 29 254 -8 371 270 0 10 chr2 17968189 17968289 -235288294 + MIR SINE MIR 162 260 -2 21 0 0 0 chr2 17968556 17968577 -235288006 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr2 17970554 17970589 -235285994 + GC_rich Low_complexity Low_complexity 1 35 0 231 88 0 0 chr2 17970665 17970699 -235285884 + (CGGGG)n Simple_repeat Simple_repeat 5 38 0 28 48 0 0 chr2 17970750 17970792 -235285791 + GC_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 17970855 17970876 -235285707 + GC_rich Low_complexity Low_complexity 1 21 0 2017 164 0 0 chr2 17974137 17974449 -235282134 + AluJb SINE Alu 1 312 0 211 244 268 16 chr2 17974482 17974609 -235281974 + MIR3 SINE MIR 45 203 -5 299 323 91 70 chr2 17975105 17975390 -235281193 + L2 LINE L2 2977 3267 -5 2205 119 3 0 chr2 17975394 17975688 -235280895 + AluSx SINE Alu 1 295 -17 483 292 0 0 chr2 17975998 17976111 -235280472 - MER81 DNA DNA 0 114 2 684 304 44 15 chr2 17976118 17976391 -235280192 + MLT1J LTR MaLR 83 363 -148 775 215 6 6 chr2 17976513 17976671 -235279912 + Charlie4 DNA MER1_type 1803 1960 -1 696 254 93 18 chr2 17976672 17977027 -235279556 + L2 LINE L2 2684 3070 -243 43416 54 1 0 chr2 17977052 17983201 -235273382 + L1PA5 LINE L1 11 6163 0 516 247 5 76 chr2 17983232 17983455 -235273128 + L2 LINE L2 3107 3313 0 369 0 0 0 chr2 17984273 17984314 -235272269 + (CA)n Simple_repeat Simple_repeat 2 42 0 538 273 92 55 chr2 17984628 17984954 -235271629 - MER102b DNA MER1_type -2 339 2 240 295 265 0 chr2 17985036 17985236 -235271347 + L2 LINE L2 2233 2485 -829 825 241 35 18 chr2 17985543 17985771 -235270812 + MIR SINE MIR 30 261 -1 2258 104 0 17 chr2 17985859 17986156 -235270427 + AluSx SINE Alu 1 292 -20 217 280 80 0 chr2 17986392 17986467 -235270116 + L2 LINE L2 3139 3219 -53 560 222 144 0 chr2 17986929 17987109 -235269474 - MIR SINE MIR -10 252 47 22 0 0 0 chr2 17987247 17987269 -235269314 + AT_rich Low_complexity Low_complexity 1 22 0 318 252 9 26 chr2 17987270 17987385 -235269198 + MIR SINE MIR 149 261 -1 195 42 0 0 chr2 17987390 17987414 -235269169 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1498 106 0 0 chr2 17987419 17987618 -235268965 - AluSc SINE Alu -25 284 86 5677 145 21 7 chr2 17987718 17988816 -235267767 + L1PA16 LINE L1 5051 6163 -3 326 183 28 0 chr2 17991090 17991161 -235265422 - L1ME4a LINE L1 -75 6046 5974 2162 124 0 7 chr2 17991517 17991823 -235264760 + AluJo SINE Alu 1 304 -8 293 317 33 17 chr2 17991829 17991949 -235264634 - MIR SINE MIR -66 142 21 285 29 0 0 chr2 17992720 17992754 -235263829 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 186 133 0 0 chr2 17993145 17993175 -235263408 + (TA)n Simple_repeat Simple_repeat 2 31 0 670 187 71 33 chr2 17993220 17993402 -235263181 + MER53 DNA DNA 1 189 0 233 167 0 67 chr2 17993795 17993855 -235262728 + (TCTCTG)n Simple_repeat Simple_repeat 6 61 0 182 91 30 0 chr2 17993865 17993898 -235262685 + CT-rich Low_complexity Low_complexity 2 35 0 325 268 79 37 chr2 17994660 17994824 -235261759 + MIR SINE MIR 65 235 -27 194 308 48 48 chr2 17994832 17994936 -235261647 - L2 LINE L2 0 3272 3169 210 295 26 0 chr2 17994964 17995042 -235261541 + MIR SINE MIR 13 92 -170 2490 138 16 47 chr2 17995312 17995718 -235260865 - MER57B LTR ERV1 0 434 42 2204 110 0 0 chr2 17995718 17996009 -235260574 + AluSg SINE Alu 3 293 -17 2490 138 16 47 chr2 17996009 17996050 -235260533 - MER57B LTR ERV1 -392 42 1 430 268 172 0 chr2 17997560 17997758 -235258825 - MIR SINE MIR 0 262 31 249 275 22 22 chr2 17999320 17999411 -235257172 - MLT1K LTR MaLR -308 280 190 1824 169 0 29 chr2 17999939 18000247 -235256336 - AluJo SINE Alu -13 299 1 596 334 81 46 chr2 18001393 18002072 -235254511 - L1MEd LINE L1 -5366 753 51 2106 142 3 0 chr2 18003584 18003893 -235252690 - AluSx SINE Alu -2 310 1 282 304 174 0 chr2 18004474 18004589 -235251994 - L2 LINE L2 0 3313 3179 1681 183 18 0 chr2 18005716 18006000 -235250583 + AluJb SINE Alu 1 289 -23 884 184 14 0 chr2 18006269 18006416 -235250167 + BC200 scRNA scRNA 2 150 -50 4176 171 8 19 chr2 18056928 18057659 -235198924 - Ricksha DNA DNA -814 2432 1710 594 138 8 54 chr2 18057644 18057774 -235198809 - Ricksha DNA DNA -1049 132 9 * 352 195 81 0 chr2 18057930 18058017 -235198566 - L1MB7 LINE L1 0 6184 6091 * 1112 143 55 46 chr2 18058013 18058251 -235198332 - L1M4 LINE L1 -650 5534 5295 226 247 13 65 chr2 18058424 18058501 -235198082 + MIR SINE MIR 66 138 -124 287 345 34 20 chr2 18058953 18059101 -235197482 + MIR SINE MIR 20 169 -93 487 313 133 23 chr2 18059109 18059461 -235197122 + L2 LINE L2 2882 3272 0 201 325 13 13 chr2 18059484 18059561 -235197022 + MIR SINE MIR 172 248 -14 2059 151 3 3 chr2 18059828 18060146 -235196437 + MSTA LTR MaLR 111 428 0 349 300 10 10 chr2 18060226 18060326 -235196257 - HAL1 LINE L1 -1326 1181 1082 1553 128 23 19 chr2 18060948 18061206 -235195377 + AluSq SINE Alu 1 259 -54 976 152 95 14 chr2 18061311 18061521 -235195062 - MLT1B LTR MaLR -78 312 86 584 147 32 0 chr2 18061583 18061678 -235194905 - MLT1B LTR MaLR -292 98 1 228 309 96 21 chr2 18063564 18063658 -235192925 + MIR SINE MIR 37 137 -71 1978 318 30 20 chr2 18063908 18064818 -235191765 + HERVI LTR ERV1 4840 5758 -2027 185 250 0 21 chr2 18065869 18065917 -235190666 - MER5C DNA MER1_type -277 47 1 * 600 341 119 25 chr2 18065917 18066469 -235190114 - L2 LINE L2 -609 2705 2102 247 239 42 14 chr2 18066724 18066795 -235189788 + MIR3 SINE MIR 126 198 -10 184 255 21 106 chr2 18067075 18067169 -235189414 + L2 LINE L2 2647 2732 -582 339 320 23 68 chr2 18067768 18067987 -235188596 + LTR67 LTR ERVL 349 557 0 363 270 20 0 chr2 18067987 18068087 -235188496 + MIR SINE MIR 159 260 -2 2250 116 123 76 chr2 18068192 18068558 -235188025 + MSTA LTR MaLR 1 389 -39 2261 99 3 34 chr2 18068558 18068881 -235187702 - AluSp SINE Alu 0 313 1 2250 116 123 76 chr2 18068881 18068921 -235187662 + MSTA LTR MaLR 389 426 -2 989 165 57 16 chr2 18068926 18069120 -235187463 + MER20 DNA MER1_type 18 219 0 2942 261 43 31 chr2 18069770 18070752 -235185831 - L1PA13 LINE L1 -4509 2278 1354 2597 138 6 3 chr2 18070962 18071325 -235185258 - THE1B LTR MaLR 0 364 1 1305 85 6 0 chr2 18071325 18071502 -235185081 - THE1B-int LTR MaLR 0 1580 1403 234 170 0 0 chr2 18071604 18071651 -235184932 + G-rich Low_complexity Low_complexity 2 48 0 371 299 0 12 chr2 18071654 18071898 -235184685 + L1PA4 LINE L1 5914 6154 -1 1166 105 6 11 chr2 18071900 18072081 -235184502 - MSTA LTR MaLR -248 180 1 1017 204 18 69 chr2 18072081 18072356 -235184227 + L1ME1 LINE L1 5904 6164 -2 201 138 0 0 chr2 18073081 18073110 -235183473 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 529 269 0 6 chr2 18073117 18073292 -235183291 - AluSc SINE Alu -38 271 98 12631 31 25 8 chr2 18073657 18075244 -235181339 - L1P LINE L1 -2065 4081 2468 21 0 0 0 chr2 18075382 18075403 -235181180 + AT_rich Low_complexity Low_complexity 1 21 0 239 282 13 39 chr2 18076253 18076331 -235180252 + MER5A DNA MER1_type 84 159 -30 219 231 31 46 chr2 18076279 18076344 -235180239 - MER5A DNA MER1_type -98 91 28 * 1764 310 33 33 chr2 18076520 18077279 -235179304 - HERVI LTR ERV1 -129 7656 6898 361 152 0 0 chr2 18077514 18077580 -235179003 - L1M4 LINE L1 -2444 3702 3637 1898 180 30 13 chr2 18077581 18078015 -235178568 + MER61D LTR ERV1 1 501 0 680 255 119 54 chr2 18078015 18078592 -235177991 + MER61D-int LTR ERV1 2 568 -2520 931 193 87 94 chr2 18078666 18078973 -235177610 + MER52-int LTR ERV1 279 893 -4740 * 2979 197 10 21 chr2 18078972 18079675 -235176908 + MER52-int LTR ERV1 2174 4825 -392 223 264 19 0 chr2 18079802 18079855 -235176728 - MIR SINE MIR -86 122 69 3063 158 26 2 chr2 18080460 18080953 -235175630 + Tigger7 DNA MER2_type 22 526 -1961 587 194 0 0 chr2 18080946 18081039 -235175544 + Tigger7 DNA MER2_type 2495 2587 0 * 269 314 49 0 chr2 18081077 18081179 -235175404 - MIR SINE MIR -71 191 85 292 241 36 12 chr2 18081862 18081945 -235174638 + CT-rich Low_complexity Low_complexity 4 88 0 1471 296 119 16 chr2 18081973 18082623 -235173960 - L1MEc LINE L1 -4383 2013 1245 3259 55 3 0 chr2 18082623 18083008 -235173575 - L1PA5 LINE L1 0 6154 5769 1471 296 119 16 chr2 18083008 18083245 -235173338 - L1MEc LINE L1 -5151 1245 1034 301 151 19 0 chr2 18083558 18083611 -235172972 - L1M LINE L1 -829 5351 5298 1902 293 88 23 chr2 18083614 18084474 -235172109 - L1MEc LINE L1 -5459 937 22 663 277 52 29 chr2 18084483 18084830 -235171753 - L1MEc LINE L1 -4306 2816 2462 491 303 11 17 chr2 18084884 18085062 -235171521 + L1MCc LINE L1 1220 1396 -5027 715 268 95 53 chr2 18085096 18085696 -235170887 - L1MEc LINE L1 -4613 2328 1704 2106 154 10 3 chr2 18085741 18086052 -235170531 - MER1B DNA MER1_type 0 339 27 421 286 29 19 chr2 18086052 18086262 -235170321 - L1MEc LINE L1 -4918 1505 1294 1171 257 107 15 chr2 18086480 18086959 -235169624 - L1M4 LINE L1 -1621 4525 4003 1099 110 186 80 chr2 18086959 18087223 -235169360 + THE1C LTR MaLR 1 292 -83 6895 120 29 29 chr2 18087223 18088335 -235168248 + THE1C-int LTR MaLR 469 1580 0 2001 111 52 83 chr2 18088335 18088722 -235167861 + THE1C LTR MaLR 1 375 0 1262 177 33 23 chr2 18088722 18089021 -235167562 - L1M4 LINE L1 -2139 4007 3706 3537 172 24 23 chr2 18089462 18090544 -235166039 - L1PA16 LINE L1 -213 5953 4873 * 3917 214 20 50 chr2 18090543 18091657 -235164926 - L1M4 LINE L1 -2438 3708 2629 4167 141 34 36 chr2 18091770 18092929 -235163654 + MER61-int LTR ERV1 609 1970 -3616 * 4283 144 24 20 chr2 18092923 18093789 -235162794 + MER61-int LTR ERV1 1346 4387 -3080 5067 83 3 0 chr2 18093789 18094441 -235162142 + L1PA8A LINE L1 5309 5962 -169 373 315 132 30 chr2 18094547 18094744 -235161839 + L2 LINE L2 3039 3255 -17 250 280 13 0 chr2 18094919 18094994 -235161589 + L2 LINE L2 3195 3270 -2 24 53 0 0 chr2 18095453 18095491 -235161092 + AT_rich Low_complexity Low_complexity 1 38 0 11115 105 29 17 chr2 18095714 18097404 -235159179 + MER61-int LTR ERV1 2287 6151 -1054 385 224 0 0 chr2 18097505 18097581 -235159002 - THE1B-int LTR MaLR -1501 79 4 1170 126 22 6 chr2 18097586 18097768 -235158815 - THE1B LTR MaLR -2 362 178 1105 320 22 19 chr2 18097768 18098181 -235158402 - L1PA13 LINE L1 -6373 414 1 922 269 67 10 chr2 18098196 18098597 -235157986 - L1M4 LINE L1 -1381 4765 4342 26 93 0 0 chr2 18098622 18098697 -235157886 + AT_rich Low_complexity Low_complexity 1 75 0 869 187 14 95 chr2 18098762 18099036 -235157547 - L1MC4 LINE L1 -113 7882 7652 1714 150 32 35 chr2 18099051 18099390 -235157193 - L1MA7 LINE L1 -1 6290 5953 412 239 34 18 chr2 18099412 18099550 -235157033 - MER34 LTR ERV1 -432 110 1 2111 75 16 38 chr2 18100541 18100859 -235155724 - AluY SINE Alu 0 311 1 1680 316 48 30 chr2 18101323 18102429 -235154154 - BaEV-int LTR ERV1 -4558 2091 966 559 279 70 64 chr2 18102628 18102987 -235153596 - BaEV-int LTR ERV1 -6768 1017 657 358 243 19 19 chr2 18103096 18103199 -235153384 - BaEV-int LTR ERV1 -6279 370 268 192 200 0 0 chr2 18104423 18104463 -235152120 + T-rich Low_complexity Low_complexity 1 40 0 182 118 29 0 chr2 18104922 18104956 -235151627 + CT-rich Low_complexity Low_complexity 1 35 0 1378 170 58 4 chr2 18106288 18106547 -235150036 + LTR28-int LTR ERV1 4931 5203 -14 234 194 16 16 chr2 18106553 18106615 -235149968 + LTR28 LTR ERV1 1 62 -958 * 1931 173 28 9 chr2 18106583 18106991 -235149592 + MER61D LTR ERV1 14 501 0 1144 295 39 41 chr2 18106991 18107169 -235149414 - L1M4 LINE L1 -2507 3639 3462 7301 66 7 1 chr2 18107169 18108153 -235148430 + L1PA7 LINE L1 5167 6154 0 1144 295 39 41 chr2 18108153 18108686 -235147897 - L1M4 LINE L1 -2684 3462 2929 552 282 6 18 chr2 18108698 18108868 -235147715 + MER5B DNA MER1_type 11 178 0 181 250 17 33 chr2 18109058 18109118 -235147465 - MER5A DNA MER1_type -124 65 7 573 307 6 6 chr2 18109724 18109890 -235146693 - L1MCc LINE L1 -5126 1297 1132 423 283 64 106 chr2 18110328 18110752 -235145831 - L1MCc LINE L1 -5987 436 31 338 250 13 0 chr2 18111042 18111118 -235145465 + L2 LINE L2 3231 3307 -6 197 344 120 0 chr2 18111163 18111288 -235145295 - MIR SINE MIR -4 258 119 36 23 0 0 chr2 18111814 18111857 -235144726 + AT_rich Low_complexity Low_complexity 1 43 0 747 232 7 0 chr2 18111857 18111999 -235144584 - AluJo SINE Alu -168 144 2 317 315 16 39 chr2 18112807 18112934 -235143649 - MIR SINE MIR -57 205 82 183 333 0 46 chr2 18113081 18113168 -235143415 + L2 LINE L2 3189 3271 -1 186 171 0 0 chr2 18113480 18113521 -235143062 + CT-rich Low_complexity Low_complexity 2 42 0 288 360 0 0 chr2 18113532 18113618 -235142965 + polypyrimidine Low_complexity Low_complexity 5 90 0 204 295 62 45 chr2 18114047 18114159 -235142424 + L2 LINE L2 2626 2739 -575 12996 77 102 4 chr2 18115045 18116875 -235139708 - L1P LINE L1 -4120 2026 17 1821 126 4 0 chr2 18116875 18117137 -235139446 + MSTA LTR MaLR 166 428 0 1091 222 52 46 chr2 18117137 18117461 -235139122 - L1ME1 LINE L1 -258 5908 5583 4146 161 95 89 chr2 18117467 18117870 -235138713 + L1MC3 LINE L1 6707 7106 -679 337 256 23 0 chr2 18117870 18117956 -235138627 + MLT1F1 LTR MaLR 50 137 -430 4146 161 95 89 chr2 18117956 18118539 -235138044 + L1MC3 LINE L1 7106 7785 0 533 252 0 16 chr2 18118532 18118659 -235137924 - L1ME1 LINE L1 -576 5590 5466 * 795 220 64 46 chr2 18118689 18118971 -235137612 - L1ME1 LINE L1 -782 5364 5078 2643 71 14 11 chr2 18119072 18119437 -235137146 - L1PA8 LINE L1 -140 6032 5667 408 155 28 0 chr2 18119437 18119508 -235137075 - L1MA6 LINE L1 -319 5981 5909 1702 246 37 19 chr2 18119517 18120142 -235136441 - L1ME1 LINE L1 -1073 5073 2272 4784 141 3 11 chr2 18120161 18120915 -235135668 - L1MA4A LINE L1 -1 6302 5555 1864 147 3 46 chr2 18120915 18121241 -235135342 - AluJb SINE Alu 0 312 1 1789 113 19 20 chr2 18121243 18121675 -235134908 - L1M1 LINE L1 -755 5391 5053 826 169 81 6 chr2 18121674 18121974 -235134609 + L1 LINE L1 3114 4274 -1872 * 2292 117 0 0 chr2 18121982 18122289 -235134294 + AluSg1 SINE Alu 3 309 0 2462 178 18 2 chr2 18122293 18122747 -235133836 + L1 LINE L1 4558 5018 -1128 582 234 66 30 chr2 18122735 18122932 -235133651 - L1MEc LINE L1 -4014 2382 2179 * 1933 128 25 0 chr2 18123973 18124267 -235132316 - AluSx SINE Alu 0 301 1 1940 182 11 22 chr2 18124537 18124906 -235131677 - MLT1A1 LTR MaLR 0 365 1 729 296 141 17 chr2 18125123 18125557 -235131026 + L2 LINE L2 2559 3050 -263 1733 165 44 104 chr2 18125557 18125681 -235130902 + MLT1B LTR MaLR 1 131 -259 445 147 0 0 chr2 18125681 18125756 -235130827 + L1MA6 LINE L1 6226 6300 0 1733 165 44 104 chr2 18125756 18126044 -235130539 + MLT1B LTR MaLR 131 388 -2 647 251 147 0 chr2 18126050 18126281 -235130302 + L2 LINE L2 3049 3313 0 492 311 13 0 chr2 18127222 18127373 -235129210 - MIR SINE MIR 0 262 110 313 319 50 8 chr2 18128535 18128654 -235127929 - MIR SINE MIR -136 126 3 294 118 0 0 chr2 18128747 18128798 -235127785 - Alu SINE Alu 0 302 252 2075 54 10 61 chr2 18128898 18129195 -235127388 - AluY SINE Alu -29 282 1 209 286 0 0 chr2 18130587 18130636 -235125947 + L3 LINE CR1 1523 1571 -6 409 329 92 50 chr2 18130919 18131420 -235125163 + L2 LINE L2 1386 1907 -1407 1148 313 198 23 chr2 18131461 18132330 -235124253 + L2 LINE L2 1449 2527 -787 2524 151 53 19 chr2 18132330 18132742 -235123841 - MSTC LTR MaLR 0 428 3 1148 313 198 23 chr2 18132742 18132902 -235123681 + L2 LINE L2 2527 2658 -656 340 312 48 16 chr2 18134644 18134769 -235121814 - MER5A DNA MER1_type 0 189 61 2511 192 44 15 chr2 18134797 18135322 -235121261 - L1MB3 LINE L1 -2 6181 5642 404 303 25 31 chr2 18135671 18135833 -235120750 - MIR SINE MIR -25 237 77 187 253 27 40 chr2 18137074 18137149 -235119434 - MIR SINE MIR -188 74 1 565 258 132 0 chr2 18137399 18137581 -235119002 + MIR SINE MIR 50 255 -7 419 261 88 65 chr2 18138086 18138301 -235118282 + MIR SINE MIR 30 249 -13 208 185 163 87 chr2 18138337 18138429 -235118154 - MIR SINE MIR -92 170 72 1267 222 65 4 chr2 18138692 18138967 -235117616 + MLT1E2 LTR MaLR 4 295 -331 294 291 30 52 chr2 18139246 18139380 -235117203 + L2 LINE L2 2965 3095 -177 2038 118 3 3 chr2 18140198 18140487 -235116096 - AluSq SINE Alu -24 289 1 1015 136 28 34 chr2 18140487 18140664 -235115919 + THE1B LTR MaLR 189 364 0 217 242 121 44 chr2 18142248 18142339 -235114244 + MIR SINE MIR 43 140 -68 202 316 105 0 chr2 18143246 18143322 -235113261 + L2 LINE L2 2667 2750 -564 456 175 192 0 chr2 18143708 18143828 -235112755 - MER97a DNA MER1_type? -725 169 27 286 292 88 84 chr2 18144709 18144959 -235111624 + L2 LINE L2 2820 3070 -202 546 250 151 19 chr2 18144975 18145187 -235111396 + MIR SINE MIR 23 262 0 188 286 41 0 chr2 18145328 18145377 -235111206 + L2 LINE L2 3213 3263 -9 212 256 0 103 chr2 18146787 18146865 -235109718 - L2 LINE L2 -3 3269 3200 924 295 48 48 chr2 18146905 18147318 -235109265 + MLT1J2 LTR MaLR 36 448 -2 687 262 63 48 chr2 18148190 18148522 -235108061 - MLT1I LTR MaLR -2 407 71 1732 173 67 36 chr2 18148582 18148940 -235107643 + MLT1A2 LTR MaLR 6 374 0 1027 189 32 1 chr2 18149092 18149451 -235107132 - MSTB LTR MaLR -2 430 3 398 342 26 22 chr2 18151312 18151543 -235105040 + L2 LINE L2 2620 2851 -463 432 309 21 31 chr2 18151572 18151763 -235104820 - MER5A DNA MER1_type 0 189 1 2130 101 10 7 chr2 18151765 18152063 -235104520 + AluSx SINE Alu 1 299 -13 1955 255 74 14 chr2 18153404 18153988 -235102595 + L1ME3A LINE L1 5552 6170 0 1234 276 48 39 chr2 18154522 18154935 -235101648 - MLT1J1 LTR MaLR -29 417 1 198 378 145 0 chr2 18155422 18155615 -235100968 + L2 LINE L2 2601 2821 -493 204 311 33 11 chr2 18155751 18155841 -235100742 + L2 LINE L2 2979 3070 -202 327 321 15 22 chr2 18156467 18156604 -235099979 + MIR SINE MIR 10 145 -117 2033 111 14 10 chr2 18156762 18157050 -235099533 - AluSc SINE Alu -15 294 6 427 317 59 36 chr2 18157548 18157769 -235098814 - MIR SINE MIR -1 261 36 956 210 0 0 chr2 18157769 18157945 -235098638 - AluJb SINE Alu -2 310 135 1349 244 95 18 chr2 18159403 18159712 -235096871 + MLT1D LTR MaLR 13 370 -135 1814 128 146 3 chr2 18159712 18160040 -235096543 - THE1C LTR MaLR 0 375 1 1349 244 95 18 chr2 18160040 18160184 -235096399 + MLT1D LTR MaLR 370 501 -4 184 318 9 73 chr2 18160189 18160299 -235096284 + L2 LINE L2 3165 3267 -5 183 360 54 27 chr2 18160373 18160484 -235096099 - L2 LINE L2 0 3313 3200 552 282 63 90 chr2 18161089 18161501 -235095082 - MLT1E LTR MaLR -152 441 41 275 244 47 35 chr2 18161875 18161961 -235094622 + MIR SINE MIR 61 147 -115 365 295 122 29 chr2 18161973 18162112 -235094471 + LTR67 LTR ERVL 23 174 -383 233 231 0 64 chr2 18162047 18162125 -235094458 + MLT1J2 LTR MaLR 70 142 -308 * 385 345 17 0 chr2 18162608 18162727 -235093856 + MIR SINE MIR 21 141 -67 2363 81 0 37 chr2 18164163 18164486 -235092097 + AluY SINE Alu 1 311 0 279 140 0 0 chr2 18164488 18164538 -235092045 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 261 310 103 75 chr2 18164610 18164784 -235091799 - L2 LINE L2 -38 3234 3056 399 73 0 0 chr2 18165085 18165140 -235091443 + (TG)n Simple_repeat Simple_repeat 2 56 0 350 211 31 86 chr2 18165862 18165990 -235090593 + MIR3 SINE MIR 84 204 -4 322 326 67 1 chr2 18167907 18168067 -235088516 - MIR SINE MIR -65 143 15 306 307 52 52 chr2 18169209 18169362 -235087221 - MIR3 SINE MIR -18 190 38 401 284 31 8 chr2 18170884 18171011 -235085572 - MIR SINE MIR -35 227 98 633 281 20 0 chr2 18171082 18171235 -235085348 + MIR SINE MIR 11 166 -96 22 0 0 0 chr2 18171272 18171294 -235085289 + AT_rich Low_complexity Low_complexity 1 22 0 271 280 100 39 chr2 18171713 18172054 -235084529 - MLT1F1 LTR MaLR -184 411 3 275 276 114 9 chr2 18172748 18172853 -235083730 - MIR SINE MIR -26 236 121 1382 206 74 53 chr2 18172886 18173375 -235083208 - MLT1D LTR MaLR 0 505 7 353 277 50 0 chr2 18173380 18173481 -235083102 - MLT1D-int LTR MaLR 0 1371 1266 307 303 138 0 chr2 18173605 18173714 -235082869 + L2 LINE L2 3190 3313 0 1439 186 4 8 chr2 18174276 18174524 -235082059 + L1PA16 LINE L1 5918 6164 -2 42252 39 29 4 chr2 18174707 18180345 -235076238 + L1P1 LINE L1 1 5780 -375 892 292 42 37 chr2 18180556 18181124 -235075459 - L1M4 LINE L1 -1501 6064 5494 242 281 123 0 chr2 18181826 18181940 -235074643 + MER5C DNA MER1_type 18 145 -179 184 266 37 156 chr2 18182093 18182311 -235074272 + L2 LINE L2 3000 3191 -81 416 295 14 7 chr2 18182449 18182588 -235073995 - L2 LINE L2 0 3313 3174 624 277 113 56 chr2 18183219 18183790 -235072793 - L2 LINE L2 0 3313 2701 1947 295 112 35 chr2 18183793 18184768 -235071815 - L2 LINE L2 -1771 1543 494 2324 113 44 41 chr2 18185337 18185700 -235070883 + THE1B LTR MaLR 1 364 0 11100 97 57 4 chr2 18185700 18187200 -235069383 + THE1B-int LTR MaLR 1 1580 0 2161 136 44 33 chr2 18187200 18187560 -235069023 + THE1B LTR MaLR 1 364 0 1578 116 26 21 chr2 18188056 18188289 -235068294 - MER46A DNA MER2_type 0 236 3 342 298 66 20 chr2 18188445 18188643 -235067940 + MIR SINE MIR 34 240 -22 507 198 38 0 chr2 18188940 18189046 -235067537 + MER91C DNA MER1_type 1 110 -30 690 164 22 7 chr2 18189110 18189257 -235067326 - L1M4 LINE L1 -3942 3625 3476 2590 135 6 3 chr2 18189257 18189620 -235066963 - THE1B LTR MaLR 0 364 1 291 123 18 18 chr2 18189620 18189677 -235066906 - THE1B-int LTR MaLR 0 1580 1524 * 1074 89 19 0 chr2 18189672 18189830 -235066753 + THE1-int LTR MaLR 904 1064 -516 585 307 178 28 chr2 18191014 18191534 -235065049 - L2 LINE L2 -4 3309 2703 36 40 0 0 chr2 18191536 18191586 -235064997 + AT_rich Low_complexity Low_complexity 1 50 0 321 369 72 9 chr2 18191876 18192098 -235064485 - L2 LINE L2 -528 2786 2551 22 0 0 0 chr2 18192169 18192191 -235064392 + AT_rich Low_complexity Low_complexity 1 22 0 270 324 144 6 chr2 18192682 18192855 -235063728 + MIR SINE MIR 60 256 -6 5466 149 46 15 chr2 18193158 18194521 -235062062 + L1MA4 LINE L1 4887 6284 -16 237 210 92 59 chr2 18194573 18194692 -235061891 + MIR SINE MIR 20 142 -120 271 360 36 29 chr2 18195151 18195290 -235061293 - L2 LINE L2 -9 3263 3124 994 288 95 27 chr2 18195533 18195977 -235060606 - MLT1K LTR MaLR -21 567 94 2269 159 33 14 chr2 18196105 18196526 -235060057 + L1MA7 LINE L1 5859 6287 -4 207 267 17 17 chr2 18196938 18196998 -235059585 + L2 LINE L2 2667 2726 -588 210 322 78 11 chr2 18197140 18197230 -235059353 + L2 LINE L2 2965 3060 -212 292 296 121 30 chr2 18197659 18197791 -235058792 + MIR3 SINE MIR 3 146 -62 1301 291 59 67 chr2 18197841 18198618 -235057965 - L3 LINE CR1 0 1577 807 606 331 79 19 chr2 18198979 18199296 -235057287 - L3 LINE CR1 -758 819 484 185 339 17 0 chr2 18199323 18199382 -235057201 - L2 LINE L2 -39 3233 3174 261 295 11 32 chr2 18199536 18199631 -235056952 - L2 LINE L2 -215 3057 2965 1556 207 7 17 chr2 18201980 18202280 -235054303 - AluJo SINE Alu -15 297 1 187 318 186 34 chr2 18202797 18203184 -235053399 + L2 LINE L2 1981 2426 -888 198 0 0 0 chr2 18203273 18203295 -235053288 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6905 58 21 5 chr2 18203295 18204681 -235051902 - L1PA6 LINE L1 -11 6143 4743 667 126 96 0 chr2 18204681 18204796 -235051787 + L1P LINE L1 2327 2458 -3688 324 0 0 0 chr2 18204796 18204832 -235051751 + (TA)n Simple_repeat Simple_repeat 1 36 0 667 126 96 0 chr2 18204832 18204851 -235051732 + L1P LINE L1 2458 2474 -3672 3351 130 19 4 chr2 18204951 18205474 -235051109 + THE1B-int LTR MaLR 1044 1574 -6 2022 137 76 15 chr2 18205479 18205822 -235050761 + THE1B LTR MaLR 1 364 0 607 292 74 25 chr2 18206061 18206414 -235050169 + MLT1K LTR MaLR 217 586 -2 400 153 318 0 chr2 18206659 18206744 -235049839 - FLAM_C SINE Alu -20 123 12 432 143 0 0 chr2 18206820 18206904 -235049679 + (TG)n Simple_repeat Simple_repeat 1 84 0 211 319 0 44 chr2 18206910 18207001 -235049582 + MIR SINE MIR 156 242 -20 189 0 0 0 chr2 18207177 18207198 -235049385 + (TA)n Simple_repeat Simple_repeat 1 21 0 200 280 0 0 chr2 18208475 18208525 -235048058 + GA-rich Low_complexity Low_complexity 3 52 0 189 270 0 0 chr2 18208619 18208708 -235047875 + GA-rich Low_complexity Low_complexity 3 91 0 2052 250 53 5 chr2 18208889 18209528 -235047055 - MST-int LTR MaLR -955 696 27 306 301 37 7 chr2 18209525 18209661 -235046922 + THE1-int LTR MaLR 466 605 -975 * 532 253 50 11 chr2 18209665 18209847 -235046736 - MSTA LTR MaLR -162 266 78 497 241 195 29 chr2 18209854 18210095 -235046488 + MST-int LTR MaLR 976 1256 -395 314 191 32 0 chr2 18210256 18210319 -235046264 - MSTA LTR MaLR -363 65 1 1181 213 30 42 chr2 18210319 18210652 -235045931 - MSTA-int LTR MaLR 0 1651 1323 280 267 109 0 chr2 18210657 18210758 -235045825 - MSTA LTR MaLR -257 171 60 394 237 21 0 chr2 18210807 18210904 -235045679 - MSTA LTR MaLR -329 99 1 3515 233 70 32 chr2 18210904 18211989 -235044594 - MSTA-int LTR MaLR 0 1651 526 34049 94 9 8 chr2 18212094 18217236 -235039347 - L1P LINE L1 -987 5159 11 209 257 20 20 chr2 18217599 18217700 -235038883 + (TA)n Simple_repeat Simple_repeat 2 102 0 702 214 41 38 chr2 18217887 18218154 -235038429 - L1MC4 LINE L1 0 8042 7775 21 57 0 0 chr2 18218567 18218602 -235037981 + AT_rich Low_complexity Low_complexity 1 35 0 264 299 0 0 chr2 18218926 18218993 -235037590 - HAL1 LINE L1 -611 1896 1830 326 331 103 38 chr2 18219036 18219220 -235037363 - HAL1 LINE L1 -752 1755 1560 232 277 124 29 chr2 18219277 18219519 -235037064 - HAL1 LINE L1 -1030 1477 1213 1158 265 135 32 chr2 18219521 18220046 -235036537 + MLT2E LTR ERVL 27 605 -23 182 349 64 18 chr2 18220720 18220829 -235035754 + L2 LINE L2 2733 2846 -468 196 389 80 18 chr2 18221096 18221209 -235035374 + L2 LINE L2 3136 3255 -17 2268 143 60 38 chr2 18221447 18221866 -235034717 - MSTC LTR MaLR 0 428 1 222 307 148 55 chr2 18222259 18222461 -235034122 - L2 LINE L2 0 3272 3052 374 261 152 7 chr2 18222692 18222830 -235033753 - MER5B DNA MER1_type -1 177 20 237 341 24 0 chr2 18222856 18222938 -235033645 - MIR3 SINE MIR -5 203 120 1723 169 129 33 chr2 18222966 18223060 -235033523 + MLT1C LTR MaLR 1 85 -382 2332 169 36 7 chr2 18223060 18223474 -235033109 - MSTA LTR MaLR -2 426 1 1723 169 129 33 chr2 18223474 18223805 -235032778 + MLT1C LTR MaLR 85 467 0 214 250 0 0 chr2 18224170 18224214 -235032369 + (TG)n Simple_repeat Simple_repeat 1 44 0 304 290 97 51 chr2 18224592 18224768 -235031815 - MIR3 SINE MIR -2 206 23 246 291 25 13 chr2 18224793 18224872 -235031711 + MIR SINE MIR 71 150 -112 1131 131 75 5 chr2 18224906 18225120 -235031463 - L1PB4 LINE L1 -258 5898 5670 223 255 0 0 chr2 18225493 18225544 -235031039 + GA-rich Low_complexity Low_complexity 1 51 0 184 358 49 0 chr2 18225715 18225796 -235030787 - MIR3 SINE MIR -19 189 105 923 180 26 11 chr2 18226117 18226306 -235030277 + MLT1D LTR MaLR 1 192 -313 2126 149 40 36 chr2 18226327 18226876 -235029707 - MLT2A2 LTR ERVL 0 554 1 868 220 105 29 chr2 18226882 18227159 -235029424 + MLT1D LTR MaLR 208 505 0 1834 87 0 0 chr2 18227897 18228126 -235028457 - AluSg SINE Alu -81 229 1 464 335 126 5 chr2 18228221 18228427 -235028156 + MIR SINE MIR 3 233 -29 404 293 24 24 chr2 18228559 18228682 -235027901 + L2 LINE L2 3149 3271 -1 233 152 22 0 chr2 18229051 18229097 -235027486 - L1M4 LINE L1 -2073 4073 4027 237 219 104 10 chr2 18229130 18229226 -235027357 - L1MDa LINE L1 -4787 1342 1238 518 319 90 18 chr2 18229234 18229513 -235027070 - L1MDa LINE L1 -4883 1236 938 450 323 132 25 chr2 18230746 18231065 -235025518 + L1ME4a LINE L1 5532 5884 -237 2063 108 30 7 chr2 18231080 18231377 -235025206 - AluSg SINE Alu -6 304 1 28 61 0 0 chr2 18231574 18231623 -235024960 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr2 18232184 18232206 -235024377 + AT_rich Low_complexity Low_complexity 1 22 0 275 26 51 0 chr2 18232659 18232698 -235023885 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 293 264 42 0 chr2 18233670 18233742 -235022841 + MIR SINE MIR 54 128 -134 1370 231 101 90 chr2 18235357 18236123 -235020460 - LTR41 LTR ERVL 0 767 3 217 277 188 0 chr2 18236425 18236526 -235020057 - MIR SINE MIR -11 251 132 578 304 6 0 chr2 18236596 18236754 -235019829 + MIR SINE MIR 70 228 -34 227 333 12 12 chr2 18236873 18236954 -235019629 - MIR SINE MIR -173 89 9 333 172 104 45 chr2 18237221 18237355 -235019228 + LTR19A LTR ERV1 342 483 -3 330 389 79 26 chr2 18238124 18238515 -235018068 - L2 LINE L2 -838 2476 2065 221 188 83 0 chr2 18238634 18238682 -235017901 - MER91C DNA MER1_type -35 105 54 183 250 0 0 chr2 18240044 18240076 -235016507 + MIR SINE MIR 33 64 -144 337 344 36 40 chr2 18241227 18241451 -235015132 - L2 LINE L2 -221 3051 2829 2086 314 121 34 chr2 18242241 18243770 -235012813 + L2 LINE L2 1286 2947 -367 314 264 23 23 chr2 18243923 18244010 -235012573 + L2 LINE L2 3221 3307 -6 442 253 0 10 chr2 18244029 18244128 -235012455 - MIR3 SINE MIR -24 184 87 403 369 39 39 chr2 18244594 18244903 -235011680 - L2 LINE L2 -472 2842 2534 280 305 54 29 chr2 18245449 18245688 -235010895 + L1ME LINE L1 5593 5837 -284 1517 135 87 8 chr2 18245696 18245962 -235010621 - MSTA LTR MaLR 0 428 142 878 222 18 114 chr2 18246098 18246441 -235010142 - L2 LINE L2 -1 3312 3003 247 159 130 43 chr2 18246567 18246636 -235009947 + MIR3 SINE MIR 111 185 -23 254 287 155 39 chr2 18246702 18246831 -235009752 - L2 LINE L2 0 3272 3129 207 336 58 19 chr2 18247498 18247602 -235008981 + L2 LINE L2 2987 3094 -178 213 284 14 27 chr2 18247720 18247789 -235008794 - MIR SINE MIR -65 143 76 935 215 11 0 chr2 18247789 18247975 -235008608 - MER5A DNA MER1_type -1 188 1 247 263 98 8 chr2 18248586 18248719 -235007864 - L1ME4a LINE L1 -11 6110 5966 240 122 0 0 chr2 18248758 18248799 -235007784 + (TA)n Simple_repeat Simple_repeat 2 42 0 452 299 102 0 chr2 18249025 18249167 -235007416 - L1ME4a LINE L1 -320 5801 5675 2408 43 7 4 chr2 18249167 18249448 -235007135 + AluY SINE Alu 27 308 -3 452 299 102 0 chr2 18249448 18249559 -235007024 - L1ME4a LINE L1 -446 5675 5522 1054 184 62 53 chr2 18250572 18250893 -235005690 - MER33 DNA MER1_type 0 324 1 790 257 32 5 chr2 18251236 18251454 -235005129 + MER58A DNA MER1_type 1 224 0 197 308 217 50 chr2 18252016 18252136 -235004447 + MIR3 SINE MIR 8 147 -61 680 218 170 0 chr2 18252214 18252379 -235004204 + MIR SINE MIR 41 233 -29 367 281 105 7 chr2 18252501 18252643 -235003940 - MIR SINE MIR -17 191 24 346 345 31 27 chr2 18252844 18253067 -235003516 + MLT1K LTR MaLR 2 225 -363 30973 101 12 57 chr2 18253753 18260192 -234996391 - L1PA7 LINE L1 -4 6150 12 1010 225 28 0 chr2 18260931 18261149 -234995434 - MER58A DNA MER1_type 0 224 1 2521 100 17 0 chr2 18261454 18261803 -234994780 + THE1A LTR MaLR 1 355 0 26 0 0 0 chr2 18261887 18261913 -234994670 + AT_rich Low_complexity Low_complexity 1 26 0 410 363 41 24 chr2 18261927 18262222 -234994361 - L2 LINE L2 -559 2755 2456 806 229 133 9 chr2 18262765 18262983 -234993600 + MIR SINE MIR 8 252 -10 257 61 0 0 chr2 18264145 18264178 -234992405 + U2 snRNA snRNA 1 33 -155 1816 182 3 0 chr2 18265993 18266289 -234990294 - AluJo SINE Alu -15 297 1 5763 112 13 0 chr2 18266687 18267610 -234988973 + L1PB1 LINE L1 5215 6147 -4 29 98 0 0 chr2 18267854 18267946 -234988637 + AT_rich Low_complexity Low_complexity 1 92 0 1977 99 19 75 chr2 18268789 18269055 -234987528 - L1MA3 LINE L1 0 6305 6064 2002 108 56 0 chr2 18269055 18269225 -234987358 - AluY SINE Alu -9 302 108 2207 54 0 4 chr2 18269225 18269484 -234987099 - AluY SINE Alu -6 305 48 2002 108 56 0 chr2 18269484 18269599 -234986984 - AluY SINE Alu -203 108 1 1977 99 19 75 chr2 18269599 18269705 -234986878 - L1MA3 LINE L1 -241 6064 5954 261 305 38 29 chr2 18269717 18269822 -234986761 - MIR SINE MIR -67 141 36 21 57 0 0 chr2 18270599 18270634 -234985949 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 18270766 18270787 -234985796 + AT_rich Low_complexity Low_complexity 1 21 0 336 244 126 31 chr2 18270846 18270973 -234985610 - L1MC/D LINE L1 -893 5466 5328 362 249 97 113 chr2 18272512 18272821 -234983762 + MLT1K LTR MaLR 271 574 -14 597 319 169 36 chr2 18272981 18273392 -234983191 + L2 LINE L2 2312 2802 -512 2172 116 3 3 chr2 18273392 18273685 -234982898 + AluSx SINE Alu 1 293 -19 597 319 169 36 chr2 18273685 18273771 -234982812 + L2 LINE L2 2802 2875 -439 325 315 42 24 chr2 18273942 18274107 -234982476 - MIR SINE MIR -48 214 47 5466 63 3 4 chr2 18275453 18276153 -234980430 - L1PA7 LINE L1 0 6154 5456 225 236 18 0 chr2 18276276 18276331 -234980252 + MIR SINE MIR 86 141 -121 211 346 224 0 chr2 18276356 18276463 -234980120 - L2 LINE L2 -8 3264 3134 583 240 56 0 chr2 18276516 18276641 -234979942 - MER91C DNA MER1_type -6 134 3 459 331 81 43 chr2 18277564 18278057 -234978526 + LTR33 LTR ERVL 8 519 -2 219 139 0 0 chr2 18279509 18279545 -234977038 + (T)n Simple_repeat Simple_repeat 1 36 0 288 371 112 20 chr2 18279967 18280164 -234976419 - L2 LINE L2 0 3272 3058 281 322 43 9 chr2 18280560 18280675 -234975908 + MIR3 SINE MIR 78 196 -12 181 270 124 22 chr2 18282811 18282900 -234973683 + MIR3 SINE MIR 11 108 -100 1538 186 19 31 chr2 18283100 18283460 -234973123 + MLT1A1 LTR MaLR 10 365 0 2325 104 18 47 chr2 18283844 18284230 -234972353 + THE1C LTR MaLR 1 375 0 312 279 205 26 chr2 18285000 18285229 -234971354 - L3 LINE CR1 -87 1490 1221 525 115 13 0 chr2 18285942 18286020 -234970563 + LTR8 LTR ERV1 613 691 0 206 229 43 0 chr2 18286068 18286138 -234970445 + (TA)n Simple_repeat Simple_repeat 2 74 0 183 347 94 41 chr2 18287059 18287229 -234969354 + L2 LINE L2 2884 3062 -210 1976 141 10 0 chr2 18287364 18287654 -234968929 - AluSx SINE Alu -19 293 1 186 333 62 0 chr2 18288145 18288226 -234968357 - L2 LINE L2 -33 3239 3154 279 157 0 0 chr2 18288264 18288315 -234968268 + (CA)n Simple_repeat Simple_repeat 2 52 0 272 309 99 31 chr2 18288797 18288959 -234967624 + MIR SINE MIR 34 206 -56 637 262 84 5 chr2 18289678 18289869 -234966714 + MIR SINE MIR 57 262 0 283 175 48 0 chr2 18290112 18290175 -234966408 - MIR SINE MIR -62 146 81 355 315 79 0 chr2 18290708 18290835 -234965748 - MIR3 SINE MIR -34 174 38 276 260 63 47 chr2 18291876 18292003 -234964580 - MIR SINE MIR -45 217 89 365 316 44 0 chr2 18293451 18293565 -234963018 + MIR SINE MIR 30 148 -60 247 299 28 47 chr2 18293639 18293746 -234962837 + L2 LINE L2 2955 3059 -213 2243 123 26 9 chr2 18293887 18294236 -234962347 + THE1A LTR MaLR 1 355 0 11769 98 3 0 chr2 18294236 18295811 -234960772 + THE1A-int LTR MaLR 1 1580 0 2072 109 40 3 chr2 18295813 18296142 -234960441 + THE1A LTR MaLR 15 355 0 209 190 190 52 chr2 18296147 18296205 -234960378 + L2 LINE L2 3200 3265 -7 183 186 0 0 chr2 18296246 18296289 -234960294 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 28 0 0 0 chr2 18297128 18297156 -234959427 + AT_rich Low_complexity Low_complexity 1 28 0 2509 175 41 4 chr2 18297174 18297660 -234958923 - L1MC1 LINE L1 -6 6327 5824 443 118 13 0 chr2 18297660 18297736 -234958847 + (TCCC)n Simple_repeat Simple_repeat 1 77 0 1603 189 13 28 chr2 18297736 18298053 -234958530 - AluJo SINE Alu 0 312 1 5471 224 23 13 chr2 18298053 18300128 -234956455 - L1MC1 LINE L1 -507 5826 3729 182 395 13 13 chr2 18300443 18300519 -234956064 - MIR SINE MIR -182 80 5 1762 141 0 0 chr2 18300997 18301239 -234955344 - AluSx SINE Alu -70 242 1 578 363 12 12 chr2 18302915 18303166 -234953417 - MIR SINE MIR -1 261 11 196 365 56 28 chr2 18303472 18303579 -234953004 + MIR SINE MIR 1 110 -152 216 0 0 0 chr2 18304555 18304579 -234952004 + (T)n Simple_repeat Simple_repeat 1 24 0 22 56 0 0 chr2 18304646 18304682 -234951901 + AT_rich Low_complexity Low_complexity 1 36 0 261 83 0 0 chr2 18305190 18305226 -234951357 + (TTTTC)n Simple_repeat Simple_repeat 4 39 0 2268 112 0 3 chr2 18305240 18305552 -234951031 - AluSx SINE Alu -1 311 1 396 0 0 0 chr2 18307481 18307525 -234949058 + (CA)n Simple_repeat Simple_repeat 1 44 0 2134 106 7 20 chr2 18308045 18308347 -234948236 + AluSx SINE Alu 1 298 -14 2272 105 0 0 chr2 18308350 18308646 -234947937 + AluSx SINE Alu 1 296 -16 348 24 0 0 chr2 18308834 18308877 -234947706 + (TG)n Simple_repeat Simple_repeat 1 43 -388 1710 182 20 35 chr2 18308877 18309224 -234947359 - MER2 DNA MER2_type 0 344 3 348 24 0 0 chr2 18309224 18309265 -234947318 + (TG)n Simple_repeat Simple_repeat 2 42 0 219 146 0 0 chr2 18309405 18309446 -234947137 + (TC)n Simple_repeat Simple_repeat 2 42 0 241 188 12 141 chr2 18309447 18309532 -234947051 - L1MEd LINE L1 -6042 77 4 408 329 66 28 chr2 18309755 18309968 -234946615 + MIR SINE MIR 22 242 -20 21 36 0 0 chr2 18310688 18310716 -234945867 + AT_rich Low_complexity Low_complexity 1 28 0 255 95 238 48 chr2 18311166 18311229 -234945354 - MADE1 DNA Mariner -3 77 3 180 289 92 13 chr2 18311405 18311481 -234945102 - L2 LINE L2 -563 2751 2670 2021 223 66 36 chr2 18313720 18314356 -234942227 + L1MC4 LINE L1 6783 7437 -605 344 322 91 83 chr2 18314452 18314825 -234941758 + L2 LINE L2 2894 3269 -3 666 241 47 11 chr2 18314929 18315120 -234941463 - MER3 DNA MER1_type -1 208 11 1774 176 27 44 chr2 18315123 18315301 -234941282 - L1M4 LINE L1 -432 5752 5573 2558 75 0 0 chr2 18315301 18315609 -234940974 - AluY SINE Alu -3 308 1 1774 176 27 44 chr2 18315609 18316023 -234940560 - L1M4 LINE L1 -611 5573 5172 22 0 0 0 chr2 18316033 18316055 -234940528 + AT_rich Low_complexity Low_complexity 1 22 0 4848 128 31 56 chr2 18316442 18317134 -234939449 - L1PA15 LINE L1 -4 6161 5453 2072 143 27 19 chr2 18317134 18317504 -234939079 + THE1C LTR MaLR 1 373 -2 9681 116 33 42 chr2 18317508 18319100 -234937483 + THE1C-int LTR MaLR 3 1580 0 1878 164 19 32 chr2 18319100 18319478 -234937105 + THE1C LTR MaLR 1 373 -2 4848 128 31 56 chr2 18319478 18319679 -234936904 - L1PA15 LINE L1 -714 5451 5246 2117 127 6 19 chr2 18319679 18319995 -234936588 - AluSx SINE Alu 0 312 1 2189 120 3 0 chr2 18319999 18320290 -234936293 - AluSx SINE Alu -20 292 1 4848 128 31 56 chr2 18320290 18321179 -234935404 - L1PA15 LINE L1 -922 5243 4132 1813 165 7 0 chr2 18321179 18321452 -234935131 + AluSx SINE Alu 1 275 -37 4848 128 31 56 chr2 18321452 18321596 -234934987 - L1PA15 LINE L1 -2033 4132 3986 4084 216 26 18 chr2 18321591 18322686 -234933897 + L1PA15 LINE L1 2914 4017 -2129 * 21 0 0 0 chr2 18322776 18322797 -234933786 + AT_rich Low_complexity Low_complexity 1 21 0 271 373 57 6 chr2 18323275 18323433 -234933150 - MIR SINE MIR 0 262 97 983 281 56 20 chr2 18325007 18325402 -234931181 + MLT1I LTR MaLR 1 409 0 229 340 68 19 chr2 18325750 18325853 -234930730 + L2 LINE L2 3157 3264 -8 237 117 50 0 chr2 18326022 18326082 -234930501 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 266 257 92 0 chr2 18326241 18326350 -234930233 - HAL1 LINE L1 -146 2361 2243 373 279 66 47 chr2 18326395 18326616 -234929967 - HAL1b LINE L1 -129 2378 746 647 270 118 48 chr2 18326938 18327401 -234929182 - HAL1 LINE L1 -710 1797 1293 2300 114 0 0 chr2 18327401 18327709 -234928874 - AluSg SINE Alu -2 308 1 647 270 118 48 chr2 18327709 18327764 -234928819 - HAL1 LINE L1 -1214 1293 1243 2228 118 0 6 chr2 18327799 18328113 -234928470 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 18328252 18328273 -234928310 + AT_rich Low_complexity Low_complexity 1 21 0 401 340 20 0 chr2 18328535 18328682 -234927901 + LTR16A LTR ERVL 201 350 -100 180 359 23 31 chr2 18329456 18329584 -234926999 - L2 LINE L2 -14 3299 3173 774 259 92 0 chr2 18329652 18329880 -234926703 - MIR SINE MIR -13 249 1 22 70 0 0 chr2 18330153 18330196 -234926387 + AT_rich Low_complexity Low_complexity 1 43 0 364 312 63 28 chr2 18330302 18330619 -234925964 + L1ME LINE L1 5493 5820 -350 188 241 114 13 chr2 18330971 18331050 -234925533 - L2 LINE L2 -260 3012 2926 545 287 54 0 chr2 18331205 18331334 -234925249 - L2 LINE L2 0 3272 3137 252 0 0 0 chr2 18331784 18331812 -234924771 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2005 116 22 4 chr2 18331813 18332089 -234924494 - AluSq SINE Alu -32 281 1 1827 118 28 42 chr2 18332460 18332747 -234923836 - AluSc SINE Alu -3 306 24 469 324 29 29 chr2 18333266 18333507 -234923076 - L2 LINE L2 0 3313 3073 1164 265 124 12 chr2 18333601 18334028 -234922555 + MLT1E LTR MaLR 101 575 -18 2052 140 45 24 chr2 18334195 18334573 -234922010 + MSTA LTR MaLR 1 386 -42 651 88 0 0 chr2 18334588 18334679 -234921904 + (TTCC)n Simple_repeat Simple_repeat 3 93 0 2132 124 13 3 chr2 18334681 18334987 -234921596 - AluSg SINE Alu -1 309 1 291 98 0 0 chr2 18334987 18335028 -234921555 + MSTA LTR MaLR 388 428 0 246 100 0 0 chr2 18335865 18335905 -234920678 + L1ME LINE L1 5311 5350 -1009 244 324 55 36 chr2 18335969 18336244 -234920339 + L1ME LINE L1 5452 5731 -390 228 272 12 37 chr2 18336244 18336325 -234920258 - MLT1F LTR MaLR -413 129 51 21 36 0 0 chr2 18336919 18336947 -234919636 + AT_rich Low_complexity Low_complexity 1 28 0 190 278 167 40 chr2 18337369 18337495 -234919088 - MER5B DNA MER1_type 0 178 37 676 133 19 0 chr2 18338887 18338992 -234917591 + AluY SINE Alu 173 279 -32 381 109 0 0 chr2 18338992 18339056 -234917527 + (TAAA)n Simple_repeat Simple_repeat 1 64 0 679 300 76 17 chr2 18339320 18339557 -234917026 + MIR SINE MIR 2 252 -10 494 243 20 64 chr2 18339589 18339791 -234916792 + LTR65 LTR ERV1 1 193 -476 2178 182 14 43 chr2 18339816 18340255 -234916328 - MSTB LTR MaLR 0 426 1 651 217 66 50 chr2 18341509 18341707 -234914876 + MER3 DNA MER1_type 9 209 0 1524 150 62 91 chr2 18342988 18343374 -234913209 - THE1C LTR MaLR 0 375 1 514 238 76 39 chr2 18343625 18343975 -234912608 - MER52A LTR ERV1 -32 753 334 334 173 49 0 chr2 18344227 18344308 -234912275 - MER61E LTR ERV1 -484 85 1 36 53 0 0 chr2 18344320 18344377 -234912206 + AT_rich Low_complexity Low_complexity 1 57 0 211 226 12 83 chr2 18344470 18344509 -234912074 + CT-rich Low_complexity Low_complexity 2 42 -37 2043 168 34 14 chr2 18344509 18344866 -234911717 + THE1B LTR MaLR 1 364 0 11767 91 4 4 chr2 18344867 18346446 -234910137 + THE1B-int LTR MaLR 2 1580 0 2064 171 34 14 chr2 18346446 18346803 -234909780 + THE1B LTR MaLR 1 364 0 211 226 12 83 chr2 18346803 18346844 -234909739 + CT-rich Low_complexity Low_complexity 40 79 0 804 160 0 15 chr2 18347756 18347887 -234908696 + FLAM_C SINE Alu 1 129 -4 442 181 67 9 chr2 18348245 18348350 -234908233 - Tigger6 DNA MER2_type -95 1502 1392 2281 171 14 0 chr2 18348357 18348790 -234907793 - L1MB7 LINE L1 0 6184 5746 244 154 31 31 chr2 18350026 18350091 -234906492 - LTR37B LTR ERV1 -250 218 154 655 204 34 116 chr2 18350107 18350385 -234906198 + MER31-int LTR ERV1 3841 5398 -881 1205 228 56 60 chr2 18350573 18351038 -234905545 + LTR37B LTR ERV1 6 468 0 280 319 66 60 chr2 18351969 18352151 -234904432 - MER5A DNA MER1_type -6 183 1 286 353 52 44 chr2 18351980 18352116 -234904467 + MER5B DNA MER1_type 18 154 -24 2165 89 3 14 chr2 18352151 18352442 -234904141 + AluY SINE Alu 1 288 -23 317 282 89 0 chr2 18352853 18352977 -234903606 + L2 LINE L2 3138 3272 0 1661 153 7 29 chr2 18353047 18353328 -234903255 - AluSx SINE Alu -37 275 1 22 0 0 0 chr2 18353413 18353435 -234903148 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 18354733 18354754 -234901829 + AT_rich Low_complexity Low_complexity 1 21 0 877 147 0 7 chr2 18354920 18355056 -234901527 + AluJo SINE Alu 1 135 -177 707 321 30 28 chr2 18356962 18357288 -234899295 - MLT1G LTR MaLR -303 288 1 484 258 8 16 chr2 18357994 18358118 -234898465 - L2 LINE L2 -2 3311 3189 2134 154 66 33 chr2 18358120 18358659 -234897924 - MLT2A2 LTR ERVL 0 554 1 189 244 259 8 chr2 18358660 18358791 -234897792 - L2 LINE L2 -142 3171 3008 255 61 0 0 chr2 18358920 18358953 -234897630 + (TG)n Simple_repeat Simple_repeat 2 34 0 1597 203 4 4 chr2 18358953 18359229 -234897354 - AluJo SINE Alu -34 278 3 1427 182 14 47 chr2 18359298 18359595 -234896988 + AluJo SINE Alu 1 287 -25 368 260 5 10 chr2 18359831 18359930 -234896653 + MIR SINE MIR 66 169 -39 600 189 0 0 chr2 18360533 18360644 -234895939 + FLAM_C SINE Alu 1 111 -32 234 0 0 0 chr2 18360655 18360681 -234895902 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 274 361 0 0 chr2 18361318 18361401 -234895182 - MIR SINE MIR -88 120 38 378 0 0 0 chr2 18362038 18362080 -234894503 + (CA)n Simple_repeat Simple_repeat 2 43 0 3391 130 50 20 chr2 18362080 18362680 -234893903 + HSMAR2 DNA Mariner 2 619 -683 403 186 0 23 chr2 18362681 18362767 -234893816 - MER52A LTR ERV1 0 1755 1672 * 3244 198 199 31 chr2 18362745 18363731 -234892852 - MER52A LTR ERV1 -559 1196 46 4134 147 28 6 chr2 18363984 18364656 -234891927 + HSMAR2 DNA Mariner 615 1301 -1 2459 187 37 9 chr2 18364656 18365116 -234891467 - MLT2B2 LTR ERVL -42 473 1 906 210 78 45 chr2 18365429 18365830 -234890753 - L1MDa LINE L1 -3934 2195 1797 387 154 0 15 chr2 18365839 18365904 -234890679 + MLT1B LTR MaLR 1 64 -310 1076 190 26 0 chr2 18365910 18366136 -234890447 + Tigger2 DNA MER2_type 1 232 -2486 * 1867 186 30 8 chr2 18366135 18366496 -234890087 + Tigger2 DNA MER2_type 2349 2717 -1 1007 231 28 69 chr2 18366496 18366814 -234889769 + MLT1B LTR MaLR 75 379 -11 1880 213 43 47 chr2 18366831 18366904 -234889679 - L1MDa LINE L1 -4377 1752 1680 1886 147 55 33 chr2 18366904 18367271 -234889312 - THE1C LTR MaLR 0 375 1 1880 213 43 47 chr2 18367271 18367799 -234888784 - L1MDa LINE L1 -4449 1680 1153 21 0 0 0 chr2 18367922 18367943 -234888640 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 18369044 18369065 -234887518 + AT_rich Low_complexity Low_complexity 1 21 0 282 281 49 12 chr2 18369923 18370005 -234886578 + MIR SINE MIR 88 172 -90 21 57 0 0 chr2 18370743 18370778 -234885805 + AT_rich Low_complexity Low_complexity 1 35 0 239 154 31 15 chr2 18370916 18370981 -234885602 + (TA)n Simple_repeat Simple_repeat 1 66 0 2646 105 6 0 chr2 18371066 18371427 -234885156 - THE1B LTR MaLR 0 364 2 2143 115 7 0 chr2 18371668 18371956 -234884627 - AluY SINE Alu -21 290 1 185 333 95 9 chr2 18372014 18372119 -234884464 - MIR SINE MIR 0 262 149 515 259 18 35 chr2 18372210 18372380 -234884203 - MIR3 SINE MIR -24 184 18 532 305 97 35 chr2 18373155 18373608 -234882975 - L1MDa LINE L1 -5044 1075 595 181 250 179 45 chr2 18373944 18374056 -234882527 + MIR SINE MIR 136 262 0 2148 67 0 11 chr2 18374651 18374920 -234881663 + AluY SINE Alu 28 293 -18 475 277 29 7 chr2 18375138 18375275 -234881308 + MER69B DNA AcHobo 2 141 -1085 2238 117 10 0 chr2 18375281 18375590 -234880993 + AluSx SINE Alu 1 312 0 374 249 94 12 chr2 18375616 18375805 -234880778 - MER69B DNA AcHobo -256 970 766 * 2647 260 106 18 chr2 18375795 18376276 -234880307 + MER69B DNA AcHobo 152 589 -1937 7025 75 10 7 chr2 18376276 18377994 -234878589 + L1PA7 LINE L1 4429 6154 0 2647 260 106 18 chr2 18377994 18378492 -234878091 + MER69B DNA AcHobo 589 1226 0 1319 182 33 28 chr2 18379659 18380022 -234876561 - MER31A LTR ERV1 0 485 8 294 95 0 0 chr2 18380640 18380682 -234875901 + (GA)n Simple_repeat Simple_repeat 1 42 0 3847 218 45 18 chr2 18382160 18382978 -234873605 - MER21B LTR ERV1 -9 854 15 26 30 0 0 chr2 18383120 18383153 -234873430 + AT_rich Low_complexity Low_complexity 1 33 0 242 278 122 42 chr2 18383952 18384094 -234872489 + MIR SINE MIR 37 181 -69 320 258 94 30 chr2 18384596 18384696 -234871887 - MIR SINE MIR -86 122 39 209 108 27 0 chr2 18385702 18385739 -234870844 + (TATG)n Simple_repeat Simple_repeat 4 41 0 398 133 49 42 chr2 18385750 18386016 -234870567 + (TA)n Simple_repeat Simple_repeat 1 268 0 305 99 0 104 chr2 18386044 18386226 -234870357 + (TA)n Simple_repeat Simple_repeat 1 163 0 344 112 0 96 chr2 18386292 18386489 -234870094 + (TA)n Simple_repeat Simple_repeat 1 178 0 486 119 62 45 chr2 18386491 18386668 -234869915 + (CTATA)n Simple_repeat Simple_repeat 1 180 0 466 75 104 8 chr2 18386668 18386802 -234869781 + (TTATA)n Simple_repeat Simple_repeat 3 149 0 557 116 11 63 chr2 18386902 18387092 -234869491 + (TA)n Simple_repeat Simple_repeat 1 180 0 249 303 148 45 chr2 18388166 18388321 -234868262 + L3 LINE CR1 1274 1444 -133 200 159 0 23 chr2 18388738 18388782 -234867801 + (TA)n Simple_repeat Simple_repeat 1 43 0 1664 196 0 13 chr2 18389142 18389443 -234867140 - AluJo SINE Alu -15 297 1 229 385 11 0 chr2 18391216 18391307 -234865276 - MIR SINE MIR -87 121 30 38 75 0 0 chr2 18393049 18393129 -234863454 + AT_rich Low_complexity Low_complexity 1 80 0 320 213 193 100 chr2 18393846 18394085 -234862498 + L3 LINE CR1 1191 1451 -126 248 328 49 86 chr2 18395482 18395808 -234860775 - L2 LINE L2 -52 3220 2907 246 289 159 50 chr2 18396026 18396265 -234860318 - L2 LINE L2 -739 2575 2311 5333 159 57 20 chr2 18396313 18396397 -234860186 - L1MC1 LINE L1 -11 6322 6243 2197 117 47 33 chr2 18396397 18396756 -234859827 + THE1B LTR MaLR 1 364 0 5333 159 57 20 chr2 18396756 18397768 -234858815 - L1MC1 LINE L1 -90 6243 5186 2562 168 37 63 chr2 18397831 18398432 -234858151 - L1MD3 LINE L1 -8 7987 7403 332 185 46 0 chr2 18398434 18398499 -234858084 - MLT1F1 LTR MaLR -445 122 55 2204 145 80 10 chr2 18398764 18399164 -234857419 + MSTA LTR MaLR 1 428 0 324 379 86 0 chr2 18401758 18401898 -234854685 - L2 LINE L2 -5 3267 3116 217 321 73 9 chr2 18402100 18402209 -234854374 - MIR SINE MIR -122 140 25 300 242 95 0 chr2 18402914 18403009 -234853574 + MIR SINE MIR 76 179 -83 7085 40 24 0 chr2 18403742 18405205 -234851378 + L1PA5 LINE L1 4668 6151 -3 201 417 52 0 chr2 18405264 18405379 -234851204 - L2 LINE L2 -460 2854 2734 623 299 42 17 chr2 18405474 18405715 -234850868 + MIR SINE MIR 12 258 -4 265 429 40 0 chr2 18405863 18405989 -234850594 - L2 LINE L2 -176 3096 2966 2039 130 10 0 chr2 18407568 18407869 -234848714 + AluY SINE Alu 1 304 -7 449 254 129 26 chr2 18407873 18408066 -234848517 + MIR SINE MIR 49 261 -1 323 317 122 44 chr2 18409015 18409286 -234847297 - L2 LINE L2 -63 3209 2918 369 269 147 61 chr2 18409698 18410044 -234846539 - L2 LINE L2 -908 2406 2031 246 62 0 0 chr2 18410512 18410544 -234846039 + (TG)n Simple_repeat Simple_repeat 1 32 0 2634 33 3 0 chr2 18411320 18411625 -234844958 + AluY SINE Alu 1 306 -5 30 27 0 0 chr2 18411676 18411713 -234844870 + AT_rich Low_complexity Low_complexity 1 37 0 353 274 189 13 chr2 18412168 18412321 -234844262 + MIR SINE MIR 24 203 -59 385 261 15 8 chr2 18416262 18416396 -234840187 + (TAG)n Simple_repeat Simple_repeat 1 135 0 396 330 55 61 chr2 18416512 18416987 -234839596 - MLT1K LTR MaLR -25 563 92 1811 194 59 14 chr2 18417588 18418026 -234838557 - L1MB5 LINE L1 0 6174 5717 446 246 106 0 chr2 18418328 18418470 -234838113 - MIR SINE MIR -56 206 50 1868 244 69 52 chr2 18418475 18419054 -234837529 + MLT1E LTR MaLR 2 590 -3 580 253 49 8 chr2 18419057 18419346 -234837237 + MLT1E-int LTR MaLR 1 451 -920 1697 197 0 3 chr2 18419349 18419643 -234836940 - AluJo SINE Alu -19 293 1 2917 188 32 140 chr2 18419646 18420700 -234835883 - MER52A LTR ERV1 -452 1303 379 2387 186 10 0 chr2 18421003 18421503 -234835080 + L1P LINE L1 4773 5277 -869 575 203 68 17 chr2 18421508 18421685 -234834898 - L1MB5 LINE L1 -821 5325 5140 751 298 52 22 chr2 18421691 18422053 -234834530 - L1MEc LINE L1 -5997 399 27 187 375 0 0 chr2 18422787 18422835 -234833748 + L2 LINE L2 3242 3289 -24 488 308 102 84 chr2 18423024 18423358 -234833225 + L2 LINE L2 2932 3271 -1 231 114 0 0 chr2 18426445 18426480 -234830103 + (ATG)n Simple_repeat Simple_repeat 2 36 0 382 337 35 43 chr2 18426480 18426735 -234829848 - MIR SINE MIR -6 256 4 21 0 0 0 chr2 18426939 18426960 -234829623 + AT_rich Low_complexity Low_complexity 1 21 0 306 329 49 53 chr2 18427090 18427315 -234829268 + L1MC4a LINE L1 5703 5926 -1882 210 91 0 0 chr2 18428606 18428639 -234827944 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 254 364 102 0 chr2 18428681 18428799 -234827784 - MIR SINE MIR -61 147 18 200 347 0 0 chr2 18428859 18428908 -234827675 - L2 LINE L2 -23 3290 3242 416 229 65 90 chr2 18429512 18429783 -234826800 + L1MDa LINE L1 2453 2711 -3829 347 200 15 0 chr2 18429874 18429939 -234826644 + Tigger3(Golem) DNA MER2_type 15 80 -2949 3989 128 44 19 chr2 18429941 18430690 -234825893 + Tigger3(Golem) DNA MER2_type 2261 3028 -1 385 290 83 19 chr2 18430834 18431049 -234825534 + L1MDa LINE L1 2975 3175 -3365 4138 80 11 0 chr2 18431049 18431596 -234824987 + MER41A LTR ERV1 2 554 0 385 290 83 19 chr2 18431596 18432010 -234824573 + L1MDa LINE L1 3175 3643 -2897 3045 64 5 0 chr2 18432154 18432545 -234824038 - L1PA5 LINE L1 0 6154 5762 418 134 0 0 chr2 18432548 18432615 -234823968 - L1PA11 LINE L1 -12 6162 6096 595 347 60 24 chr2 18432777 18433160 -234823423 + L1MDa LINE L1 3938 4334 -2206 739 277 146 9 chr2 18433808 18434151 -234822432 - LTR16A LTR ERVL -43 407 18 229 325 102 37 chr2 18434163 18434409 -234822174 - L2 LINE L2 -804 2510 2249 591 309 64 27 chr2 18434464 18434652 -234821931 - MER91A DNA MER1_type -1 195 1 221 329 95 37 chr2 18434655 18434950 -234821633 - L2 LINE L2 -1095 2219 1908 491 267 102 26 chr2 18435161 18435402 -234821181 - MIR SINE MIR 0 262 3 200 29 114 0 chr2 18435504 18435539 -234821044 + (TTTAA)n Simple_repeat Simple_repeat 2 40 0 407 271 48 60 chr2 18436338 18436607 -234819976 + L1MC4a LINE L1 5888 6153 -1655 * 1809 240 96 1 chr2 18436599 18437287 -234819296 - L1M4 LINE L1 -3112 3034 2282 434 218 10 59 chr2 18437591 18437692 -234818891 - L2 LINE L2 -24 3289 3194 384 298 149 6 chr2 18437815 18437996 -234818587 - MIR SINE MIR 0 262 56 597 134 0 0 chr2 18438334 18438431 -234818152 + L1PB1 LINE L1 6047 6143 -8 2676 97 23 0 chr2 18438773 18439164 -234817419 - L1PA13 LINE L1 0 6163 5764 282 373 180 8 chr2 18439511 18439755 -234816828 - L2 LINE L2 -20 3252 2967 434 258 58 53 chr2 18439897 18439946 -234816637 - L1M4 LINE L1 -1662 4484 4437 900 106 8 0 chr2 18439946 18440078 -234816505 - L1PA7 LINE L1 -3 6151 6019 434 258 58 53 chr2 18440078 18440408 -234816175 - L1M4 LINE L1 -1709 4437 4103 230 271 45 77 chr2 18440639 18440678 -234815905 - HAL1b LINE L1 -768 580 541 2305 103 0 0 chr2 18440678 18440978 -234815605 + AluSx SINE Alu 1 300 -12 230 271 45 77 chr2 18440978 18441093 -234815490 - HAL1b LINE L1 -807 541 431 334 301 11 0 chr2 18441405 18441498 -234815085 - L1MC4 LINE L1 -1318 6724 6631 434 236 16 47 chr2 18441667 18441794 -234814789 - LTR67 LTR ERVL -30 527 405 1686 300 173 15 chr2 18442851 18443846 -234812737 + L2 LINE L2 1985 3138 -175 257 321 86 68 chr2 18444123 18444518 -234812065 + L2 LINE L2 2560 2961 -353 228 333 0 24 chr2 18444544 18444628 -234811955 + L2 LINE L2 2972 3053 -219 201 147 0 0 chr2 18444660 18444694 -234811889 + (GA)n Simple_repeat Simple_repeat 1 34 0 272 213 9 65 chr2 18444710 18444818 -234811765 + A-rich Low_complexity Low_complexity 4 105 0 219 254 227 9 chr2 18444914 18445024 -234811559 + L2 LINE L2 3139 3272 0 205 256 22 139 chr2 18445036 18445173 -234811410 - L2 LINE L2 -176 3096 2976 586 302 36 9 chr2 18445222 18445444 -234811139 - MIR SINE MIR -14 248 21 469 310 35 23 chr2 18446414 18446585 -234809998 + MIR SINE MIR 20 192 -70 189 0 0 0 chr2 18446620 18446641 -234809942 + (TC)n Simple_repeat Simple_repeat 2 22 0 2196 130 0 0 chr2 18446656 18446949 -234809634 - AluSx SINE Alu -19 293 1 462 279 8 8 chr2 18448353 18448475 -234808108 + MIR SINE MIR 15 136 -126 186 43 0 0 chr2 18449222 18449245 -234807338 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 229 293 37 0 chr2 18449335 18449417 -234807166 - L2 LINE L2 0 3313 3229 305 371 40 0 chr2 18449509 18449633 -234806950 - MIR SINE MIR -26 236 108 368 325 65 46 chr2 18449875 18450244 -234806339 - L2 LINE L2 -428 2886 2511 206 310 23 69 chr2 18451054 18451141 -234805442 + L2 LINE L2 3198 3280 -33 1373 156 30 7 chr2 18452021 18452291 -234804292 + L1MA4A LINE L1 5982 6257 -46 2505 132 63 89 chr2 18452291 18452906 -234803677 - LTR1 LTR ERV1 0 785 187 1282 159 8 4 chr2 18452887 18453126 -234803457 - LTR1 LTR ERV1 -534 251 12 * 329 91 0 0 chr2 18453133 18453188 -234803395 + L1MA4A LINE L1 6248 6302 -1 1713 205 5 30 chr2 18453675 18454045 -234802538 + MLT1A1 LTR MaLR 1 361 -4 1153 283 54 13 chr2 18454051 18454600 -234801983 - L1MCa LINE L1 -4352 2255 1493 201 197 0 0 chr2 18455233 18455294 -234801289 + T-rich Low_complexity Low_complexity 1 61 0 181 339 81 0 chr2 18455555 18455617 -234800966 + L2 LINE L2 3168 3234 -38 222 156 0 0 chr2 18456512 18456557 -234800026 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 693 189 20 0 chr2 18456768 18456916 -234799667 + L1MA10 LINE L1 6175 6325 -9 1380 226 20 10 chr2 18458501 18458807 -234797776 + MER47B DNA MER2_type 7 315 -103 947 249 0 0 chr2 18458901 18459110 -234797473 - MER2 DNA MER2_type -135 210 2 453 204 0 0 chr2 18459111 18459199 -234797384 + MER47B DNA MER2_type 331 418 0 1810 261 55 17 chr2 18459199 18460069 -234796514 + L1MEc LINE L1 1415 2317 -4079 3879 207 113 126 chr2 18460073 18461210 -234795373 + L1MEc LINE L1 -191 958 -5257 8010 125 11 28 chr2 18461210 18462532 -234794051 + HSMAR2 DNA Mariner 2 1301 -1 3879 207 113 126 chr2 18462532 18463126 -234793457 + L1MEc LINE L1 958 1510 -4705 2344 77 0 7 chr2 18463126 18463426 -234793157 - AluY SINE Alu -13 298 1 3879 207 113 126 chr2 18463426 18463914 -234792669 + L1MEc LINE L1 1510 2002 -4213 293 283 117 8 chr2 18463914 18464034 -234792549 + MLT1J LTR MaLR 334 466 -45 698 200 19 0 chr2 18464034 18464189 -234792394 - L1MB1 LINE L1 0 6168 6011 373 316 64 28 chr2 18464262 18464686 -234791897 + L1MEc LINE L1 3495 3933 -2282 1224 264 161 14 chr2 18464687 18465207 -234791376 - MLT1E2 LTR MaLR 0 626 30 428 291 47 17 chr2 18465353 18465587 -234790996 + L1MEc LINE L1 4087 4327 -1888 22 56 0 0 chr2 18465595 18465631 -234790952 + AT_rich Low_complexity Low_complexity 1 36 0 725 349 60 17 chr2 18466644 18467072 -234789511 - LTR16A LTR ERVL -7 443 4 502 228 2 23 chr2 18467411 18467544 -234789039 + MIR SINE MIR 59 185 -71 229 323 8 24 chr2 18467614 18467729 -234788854 + (TATATG)n Simple_repeat Simple_repeat 2 116 -10 905 227 27 32 chr2 18467729 18467949 -234788634 + MER20 DNA MER1_type 1 219 0 229 323 8 24 chr2 18467949 18467960 -234788623 + (TATATG)n Simple_repeat Simple_repeat 116 126 0 1933 108 11 126 chr2 18467980 18468361 -234788222 + MER1B DNA MER1_type 1 337 0 183 42 0 0 chr2 18468403 18468427 -234788156 + (A)n Simple_repeat Simple_repeat 1 24 0 522 316 106 43 chr2 18468840 18469537 -234787046 + L1MCa LINE L1 2 791 -5328 229 239 83 83 chr2 18469860 18470078 -234786505 + L1MCa LINE L1 793 1010 -5109 342 286 46 14 chr2 18470268 18470485 -234786098 + L1MCa LINE L1 2111 2334 -3795 642 316 30 27 chr2 18470491 18470931 -234785652 + L1MEc LINE L1 37 477 -5919 1619 274 97 13 chr2 18470999 18471856 -234784727 + L1MEc LINE L1 2626 3554 -2661 276 200 17 0 chr2 18472000 18472060 -234784523 - L1ME LINE L1 -528 5593 5533 30 0 0 0 chr2 18472300 18472330 -234784253 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr2 18472343 18472370 -234784213 + (TG)n Simple_repeat Simple_repeat 1 27 0 297 313 159 30 chr2 18472896 18473129 -234783454 + L2 LINE L2 3010 3272 0 1205 173 195 12 chr2 18473207 18473530 -234783053 + MLT1B LTR MaLR 8 389 -1 212 298 0 0 chr2 18473655 18473702 -234782881 + MIR SINE MIR 99 145 -63 2097 138 75 0 chr2 18473968 18474344 -234782239 + L1PA16 LINE L1 5759 6162 -4 2698 171 3 91 chr2 18474812 18475419 -234781164 + MLT2B3 LTR ERVL 1 554 0 224 0 0 61 chr2 18476328 18476361 -234780222 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 367 297 149 7 chr2 18476437 18476585 -234779998 + MIR SINE MIR 50 218 -44 787 169 58 9 chr2 18476768 18476993 -234779590 + MER113 DNA MER1_type? 8 243 -278 27 29 0 0 chr2 18477241 18477275 -234779308 + AT_rich Low_complexity Low_complexity 1 34 0 1925 161 6 3 chr2 18477818 18478129 -234778454 + AluSx SINE Alu 1 312 0 323 237 11 21 chr2 18480247 18480340 -234776243 - L2 LINE L2 0 3313 3222 8270 157 14 3 chr2 18480401 18481009 -234775574 + L1PA13 LINE L1 3836 4436 -1727 2466 11 60 0 chr2 18481009 18481293 -234775290 - AluY SINE Alu -10 301 1 8270 157 14 3 chr2 18481293 18483005 -234773578 + L1PA13 LINE L1 4436 6161 -2 647 237 73 6 chr2 18483243 18483420 -234773163 + MER5A DNA MER1_type 1 189 0 415 290 49 38 chr2 18484461 18484644 -234771939 + MIR SINE MIR 59 243 -19 860 292 109 5 chr2 18484644 18485028 -234771555 + MLT1J2 LTR MaLR 3 426 -24 1046 219 30 0 chr2 18485033 18485234 -234771349 + MER63A DNA MER1_type 1 207 -3 1214 234 8 14 chr2 18485545 18485908 -234770675 + L1 LINE L1 4299 4659 -1487 * 2812 187 44 16 chr2 18485884 18486552 -234770031 - L1M1 LINE L1 -743 5403 4778 378 0 0 0 chr2 18486552 18486594 -234769989 + (TG)n Simple_repeat Simple_repeat 2 43 0 2812 187 44 16 chr2 18486594 18486694 -234769889 - L1M1 LINE L1 -1368 4778 4682 3977 145 35 4 chr2 18486694 18487416 -234769167 + L1MA4 LINE L1 5557 6300 0 262 119 34 0 chr2 18487421 18487480 -234769103 + L1MB4 LINE L1 6120 6180 0 351 0 0 0 chr2 18488057 18488096 -234768487 + (TA)n Simple_repeat Simple_repeat 1 39 0 392 213 42 75 chr2 18488397 18488693 -234767890 + MLT1H LTR MaLR 216 549 0 38 22 0 0 chr2 18489200 18489245 -234767338 + AT_rich Low_complexity Low_complexity 1 45 0 337 197 53 0 chr2 18489741 18489817 -234766766 - MLT1J2 LTR MaLR -370 80 1 183 80 0 0 chr2 18490331 18490356 -234766227 + (TG)n Simple_repeat Simple_repeat 2 26 0 309 365 47 0 chr2 18490430 18490537 -234766046 - L2 LINE L2 -20 3252 3141 2225 168 5 15 chr2 18490984 18491378 -234765205 - MLT1B LTR MaLR 0 390 1 459 261 103 18 chr2 18491493 18491757 -234764826 - L2 LINE L2 -544 2770 2437 293 266 32 21 chr2 18491767 18491861 -234764722 + MIR SINE MIR 56 150 -112 332 279 29 19 chr2 18491984 18492088 -234764495 + MIR SINE MIR 124 228 -34 183 269 86 43 chr2 18492360 18492453 -234764130 + MIR SINE MIR 47 143 -119 33 73 0 0 chr2 18492563 18492631 -234763952 + AT_rich Low_complexity Low_complexity 1 68 0 381 279 103 7 chr2 18493765 18493901 -234762682 - MLT1J2 LTR MaLR -21 429 281 237 230 97 44 chr2 18494012 18494125 -234762458 - MLT1J1 LTR MaLR -323 123 5 1947 244 64 43 chr2 18494448 18495029 -234761554 - MLT1E LTR MaLR 0 593 1 235 275 33 11 chr2 18495292 18495383 -234761200 + MIR3 SINE MIR 74 166 -42 1084 235 155 13 chr2 18496570 18496858 -234759725 - MLT1D LTR MaLR 0 505 151 504 79 13 13 chr2 18496858 18496934 -234759649 + MADE1 DNA Mariner 1 76 -4 1084 235 155 13 chr2 18496934 18497019 -234759564 - MLT1D LTR MaLR -354 151 79 181 327 0 0 chr2 18497144 18497196 -234759387 - L2 LINE L2 -2 3270 3219 3831 150 37 23 chr2 18497200 18497901 -234758682 + MER50 LTR ERV1 1 711 -23 1143 318 52 33 chr2 18498534 18499340 -234757243 + L2 LINE L2 2489 3313 0 955 186 0 30 chr2 18499372 18499539 -234757044 - AluJo SINE Alu -26 286 125 285 128 0 0 chr2 18499539 18499586 -234756997 + (TA)n Simple_repeat Simple_repeat 1 47 0 701 189 8 8 chr2 18499586 18499713 -234756870 - AluJo SINE Alu -183 129 3 362 245 107 60 chr2 18500477 18500775 -234755808 - L1ME4a LINE L1 -224 5897 5586 25 95 0 0 chr2 18501051 18501125 -234755458 + AT_rich Low_complexity Low_complexity 1 74 0 21 36 0 0 chr2 18501316 18501344 -234755239 + AT_rich Low_complexity Low_complexity 1 28 0 446 326 71 55 chr2 18501344 18501779 -234754804 - L1MC/D LINE L1 -2046 5762 5321 254 382 61 0 chr2 18502040 18502171 -234754412 - L2 LINE L2 -459 2855 2717 1460 199 122 0 chr2 18504244 18504506 -234752077 - AluJb SINE Alu -7 295 2 843 221 227 10 chr2 18504509 18504817 -234751766 - MER57A LTR ERV1 -21 382 8 1522 221 39 22 chr2 18504842 18505199 -234751384 + MLT1A1 LTR MaLR 1 363 -2 279 217 17 75 chr2 18505221 18505341 -234751242 - MER104 DNA Tc2 -64 116 4 227 383 25 0 chr2 18505344 18505425 -234751158 - MIR SINE MIR -156 106 24 198 328 125 16 chr2 18506267 18506395 -234750188 + MIR3 SINE MIR 60 201 -7 196 316 22 73 chr2 18508222 18508358 -234748225 - L2 LINE L2 -3 3310 3182 238 193 35 0 chr2 18509360 18509417 -234747166 + L1P LINE L1 4987 5045 -1101 535 340 87 28 chr2 18509467 18510145 -234746438 + L1MC4a LINE L1 5114 5756 -365 300 221 0 47 chr2 18510219 18510305 -234746278 + L1ME4a LINE L1 5935 6016 -105 30 69 0 0 chr2 18510324 18510382 -234746201 + AT_rich Low_complexity Low_complexity 1 58 0 197 208 0 19 chr2 18510458 18510511 -234746072 + GA-rich Low_complexity Low_complexity 1 52 0 1587 231 81 34 chr2 18510565 18511033 -234745550 - MER74B LTR ERVL -50 572 83 1844 128 0 28 chr2 18513199 18513488 -234743095 - L1PA16 LINE L1 -305 5861 5581 * 3029 178 21 3 chr2 18513486 18514357 -234742226 + L1PA16 LINE L1 4721 5603 -563 1744 188 6 3 chr2 18514349 18514678 -234741905 - L1MB1 LINE L1 -239 5950 5621 * 1125 152 26 0 chr2 18514678 18514863 -234741720 + L1MA10 LINE L1 6128 6323 -11 928 214 63 0 chr2 18514866 18515072 -234741511 - Charlie4 DNA MER1_type -1726 235 17 367 319 34 8 chr2 18515699 18515818 -234740765 + L2 LINE L2 3146 3267 -5 579 257 46 0 chr2 18515944 18516096 -234740487 + MIR SINE MIR 84 242 -20 1293 197 10 38 chr2 18516452 18516741 -234739842 + AluJo SINE Alu 1 281 -31 186 103 0 0 chr2 18516744 18516773 -234739810 + (TTG)n Simple_repeat Simple_repeat 2 30 0 248 328 32 64 chr2 18517787 18517912 -234738671 + MIR SINE MIR 3 124 -84 1142 263 40 65 chr2 18517912 18518388 -234738195 + LTR16B LTR ERVL 1 464 0 332 270 87 108 chr2 18518407 18518822 -234737761 + MLT1K LTR MaLR 16 421 -167 564 288 128 21 chr2 18522182 18522516 -234734067 - MLT1I LTR MaLR -19 390 15 255 276 0 23 chr2 18523445 18523532 -234733051 - MLT1I LTR MaLR -15 394 310 181 211 308 0 chr2 18523684 18523736 -234732847 - MIR SINE MIR -147 115 48 358 327 200 0 chr2 18523843 18523993 -234732590 - MER5A DNA MER1_type -1 188 9 21 0 0 0 chr2 18524117 18524138 -234732445 + AT_rich Low_complexity Low_complexity 1 21 0 33348 116 20 15 chr2 18524448 18530560 -234726023 - L1PA7 LINE L1 -1 6153 12 1537 187 0 26 chr2 18530692 18531002 -234725581 + AluJo SINE Alu 1 302 -10 2239 138 39 30 chr2 18531915 18532276 -234724307 - THE1B LTR MaLR 0 364 1 29 0 0 0 chr2 18532281 18532310 -234724273 + AT_rich Low_complexity Low_complexity 1 29 0 247 295 39 0 chr2 18532317 18532395 -234724188 + MLT1K LTR MaLR 424 504 -84 180 280 0 0 chr2 18533004 18533054 -234723529 + L2 LINE L2 3179 3228 -85 261 0 0 0 chr2 18534628 18534657 -234721926 + (TG)n Simple_repeat Simple_repeat 1 29 0 410 264 54 31 chr2 18535862 18535991 -234720592 + MIR SINE MIR 58 189 -73 1864 214 19 19 chr2 18536353 18536727 -234719856 - MLT1A2 LTR MaLR 0 374 1 2033 123 23 0 chr2 18538084 18538385 -234718198 + AluSx SINE Alu 1 308 -4 187 375 163 12 chr2 18539172 18539332 -234717251 + L2 LINE L2 3088 3271 -1 361 300 53 24 chr2 18540152 18540322 -234716261 + MIR SINE MIR 42 216 -46 258 156 0 0 chr2 18541901 18541946 -234714637 + (TGG)n Simple_repeat Simple_repeat 1 45 0 710 181 8 8 chr2 18541962 18542208 -234714375 + GA-rich Low_complexity Low_complexity 1 246 0 263 244 78 44 chr2 18543733 18543823 -234712760 + MER91C DNA MER1_type 1 93 -47 206 386 48 24 chr2 18543862 18544072 -234712511 - L2 LINE L2 -91 3222 3008 313 261 252 8 chr2 18544095 18544214 -234712369 - MIR SINE MIR -65 197 50 340 263 43 50 chr2 18544493 18544677 -234711906 + MIR SINE MIR 37 216 -46 2703 96 16 8 chr2 18544715 18545105 -234711478 + L1PA11 LINE L1 5766 6156 -18 253 372 43 18 chr2 18545642 18545806 -234710777 - MIR SINE MIR -75 187 20 511 224 6 117 chr2 18547071 18547250 -234709333 - MLT1F LTR MaLR 0 542 384 430 285 0 41 chr2 18547325 18547448 -234709135 - MLT1F LTR MaLR -286 304 187 773 241 127 4 chr2 18547674 18547902 -234708681 - MIR SINE MIR 0 262 7 261 246 146 36 chr2 18548571 18548681 -234707902 + L2 LINE L2 3151 3272 0 239 220 40 0 chr2 18549970 18550020 -234706563 + MIR SINE MIR 77 128 -80 300 311 98 8 chr2 18550823 18550955 -234705628 - MIR SINE MIR -37 225 82 844 224 59 59 chr2 18553164 18553383 -234703200 - MER20 DNA MER1_type 0 219 1 349 267 93 24 chr2 18553978 18554142 -234702441 + MIR SINE MIR 22 153 -55 369 86 0 0 chr2 18554166 18554224 -234702359 + (CA)n Simple_repeat Simple_repeat 2 59 0 236 295 114 19 chr2 18554674 18554779 -234701804 + MIR SINE MIR 20 134 -74 2451 58 3 26 chr2 18556083 18556392 -234700191 - AluY SINE Alu -9 302 1 266 153 17 0 chr2 18556909 18556968 -234699615 + CT-rich Low_complexity Low_complexity 2 61 0 718 272 75 65 chr2 18559856 18560242 -234696341 + MLT1J1 LTR MaLR 29 418 -28 242 349 0 0 chr2 18561497 18561563 -234695020 + polypyrimidine Low_complexity Low_complexity 3 68 0 538 172 32 13 chr2 18561569 18561726 -234694857 + CT-rich Low_complexity Low_complexity 1 160 0 428 297 57 40 chr2 18561741 18561916 -234694667 - L2 LINE L2 -20 3252 3075 22 0 0 0 chr2 18562650 18562672 -234693911 + AT_rich Low_complexity Low_complexity 1 22 0 288 342 40 13 chr2 18562694 18562843 -234693740 - MIR SINE MIR -76 186 34 1687 154 186 32 chr2 18563083 18563454 -234693129 - MSTA LTR MaLR 0 428 1 213 39 0 0 chr2 18563626 18563652 -234692931 + (TA)n Simple_repeat Simple_repeat 2 27 0 1379 93 56 42 chr2 18563789 18564003 -234692580 - MER20 DNA MER1_type -2 217 1 189 296 257 20 chr2 18564224 18564376 -234692207 + MIR SINE MIR 17 204 -58 358 171 14 0 chr2 18564386 18564456 -234692127 + MER53 DNA DNA 1 71 -118 233 162 10 101 chr2 18564402 18564501 -234692082 - MER53 DNA DNA -7 182 93 * 381 322 65 7 chr2 18564846 18565021 -234691562 + MIR SINE MIR 23 206 -56 208 108 54 0 chr2 18565053 18565090 -234691493 + CT-rich Low_complexity Low_complexity 1 39 0 273 376 0 0 chr2 18565243 18565344 -234691239 + MIR SINE MIR 20 120 -142 3055 101 0 2 chr2 18565374 18565789 -234690794 - L1PA13 LINE L1 0 6163 5750 395 283 119 86 chr2 18565962 18566449 -234690134 + MLT1J LTR MaLR 1 503 -8 318 286 56 43 chr2 18567294 18567455 -234689128 - MIR SINE MIR -23 239 77 228 377 63 25 chr2 18567736 18567895 -234688688 + MIR3 SINE MIR 3 167 -41 233 261 63 81 chr2 18568606 18568717 -234687866 - L2 LINE L2 -3 3269 3161 273 209 0 0 chr2 18569814 18569881 -234686702 + (TA)n Simple_repeat Simple_repeat 2 68 0 5057 35 2 0 chr2 18570804 18571371 -234685212 - L1PA4 LINE L1 -1 6154 5587 231 125 0 0 chr2 18572157 18572197 -234684386 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 182 258 16 0 chr2 18572615 18572677 -234683906 + CT-rich Low_complexity Low_complexity 3 65 0 461 246 62 71 chr2 18572713 18572924 -234683659 - L1ME3A LINE L1 -36 6117 5909 243 0 0 0 chr2 18573002 18573029 -234683554 + (CA)n Simple_repeat Simple_repeat 2 28 0 420 158 32 0 chr2 18573031 18573126 -234683457 + (TA)n Simple_repeat Simple_repeat 1 98 0 956 278 75 87 chr2 18573145 18573809 -234682774 - L1ME3A LINE L1 -290 5859 5189 2526 40 0 10 chr2 18573809 18574106 -234682477 - AluY SINE Alu -17 294 1 956 278 75 87 chr2 18574106 18574627 -234681956 - L1ME3A LINE L1 -960 5189 4663 945 189 6 6 chr2 18574627 18574786 -234681797 + FRAM SINE Alu 2 160 -6 956 278 75 87 chr2 18574786 18575488 -234681095 - L1ME3A LINE L1 -1486 4663 3993 290 136 250 11 chr2 18575569 18575657 -234680926 - MER7A DNA MER2_type -178 168 62 544 325 72 7 chr2 18575739 18576167 -234680416 - L1ME3A LINE L1 -3571 2558 2103 1921 207 0 24 chr2 18576495 18576867 -234679716 + MLT1A1 LTR MaLR 1 363 -2 806 301 49 60 chr2 18576929 18577993 -234678590 - L1MEd LINE L1 -4641 1669 600 2187 120 0 3 chr2 18578022 18578331 -234678252 - AluSg SINE Alu -2 308 1 23 0 0 0 chr2 18578729 18578752 -234677831 + AT_rich Low_complexity Low_complexity 1 23 0 727 293 80 0 chr2 18580191 18580416 -234676167 + MIR SINE MIR 20 262 0 228 394 4 40 chr2 18582754 18583003 -234673580 + L2 LINE L2 2490 2729 -585 191 191 16 95 chr2 18583007 18583070 -234673513 + L2 LINE L2 1999 2056 -1258 32 64 0 13 chr2 18584727 18584745 -234671838 + AT_rich Low_complexity Low_complexity 1 18 -59 2100 84 8 0 chr2 18584745 18585008 -234671575 - AluSc SINE Alu -24 285 21 32 64 0 13 chr2 18585008 18585067 -234671516 + AT_rich Low_complexity Low_complexity 18 77 0 219 229 0 0 chr2 18585155 18585216 -234671367 + (TA)n Simple_repeat Simple_repeat 1 61 0 1294 130 12 50 chr2 18585318 18585570 -234671013 - L1MA7 LINE L1 -183 6108 5868 279 0 0 0 chr2 18585883 18585914 -234670669 + (CCA)n Simple_repeat Simple_repeat 3 33 0 268 252 202 0 chr2 18586761 18586880 -234669703 - MER102b DNA MER1_type -6 335 193 203 308 0 0 chr2 18588604 18588656 -234667927 - L2 LINE L2 -8 3305 3254 2755 137 21 2 chr2 18589331 18589763 -234666820 - L1PA16 LINE L1 -1 6165 5726 294 346 56 0 chr2 18590058 18590165 -234666418 - L2 LINE L2 -3 3269 3157 245 316 51 31 chr2 18590897 18590995 -234665588 + MIR3 SINE MIR 82 181 -27 252 362 15 56 chr2 18591263 18591459 -234665124 - MER5A DNA MER1_type 0 189 2 225 191 159 87 chr2 18594296 18594422 -234662161 + MIR SINE MIR 117 251 -11 269 304 68 47 chr2 18596535 18596683 -234659900 - L2 LINE L2 -208 3064 2914 318 331 78 24 chr2 18596802 18596968 -234659615 + MER5B DNA MER1_type 2 176 -2 222 255 82 71 chr2 18597038 18597136 -234659447 + MIR SINE MIR 65 163 -99 219 69 0 0 chr2 18597745 18597774 -234658809 + (TAA)n Simple_repeat Simple_repeat 2 30 0 273 236 82 0 chr2 18598274 18598346 -234658237 - MIR3 SINE MIR -33 175 96 729 284 101 24 chr2 18600290 18600869 -234655714 - L1ME3A LINE L1 -321 5849 5226 349 290 164 38 chr2 18600869 18601210 -234655373 - L2 LINE L2 -7 3306 2923 1466 241 166 33 chr2 18601420 18601909 -234654674 + MLT1E LTR MaLR 40 593 0 180 0 0 0 chr2 18601986 18602006 -234654577 + (T)n Simple_repeat Simple_repeat 1 20 0 232 158 0 0 chr2 18602006 18602044 -234654539 + Tigger5 DNA MER2_type 37 74 -2249 247 206 32 32 chr2 18602044 18602107 -234654476 - Tigger5 DNA MER2_type -19 2304 2242 * 425 218 0 0 chr2 18602101 18602179 -234654404 + Tigger5 DNA MER2_type 2246 2323 0 220 310 178 8 chr2 18603080 18603209 -234653374 - MIR SINE MIR -31 231 81 382 255 23 13 chr2 18603354 18603482 -234653101 - MIR SINE MIR -64 144 14 718 267 88 74 chr2 18604308 18604935 -234651648 + L2 LINE L2 2665 3313 0 192 250 50 0 chr2 18604951 18605011 -234651572 + MIR SINE MIR 96 158 -104 196 371 98 23 chr2 18605509 18605641 -234650942 + L2 LINE L2 2949 3090 -182 1799 153 66 45 chr2 18605696 18606076 -234650507 - MLT1B LTR MaLR 0 390 3 393 329 93 69 chr2 18606783 18607051 -234649532 + L2 LINE L2 2906 3185 -87 2192 105 10 0 chr2 18607051 18607346 -234649237 - AluSx SINE Alu -14 298 1 393 329 93 69 chr2 18607346 18607411 -234649172 + L2 LINE L2 3185 3247 -25 403 163 68 0 chr2 18608588 18608673 -234647910 + MIR SINE MIR 100 188 -57 485 272 74 97 chr2 18608680 18609001 -234647582 - Tigger8 DNA MER2_type 0 666 364 198 71 0 0 chr2 18609001 18609029 -234647554 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 485 272 74 97 chr2 18609029 18609328 -234647255 - Tigger8 DNA MER2_type -302 364 60 296 330 10 19 chr2 18609582 18609685 -234646898 + MER5B DNA MER1_type 7 108 -70 229 356 56 0 chr2 18609695 18609785 -234646798 + MIR SINE MIR 49 143 -119 900 259 0 5 chr2 18610262 18610459 -234646124 + MER21B LTR ERV1 175 370 -493 616 251 92 85 chr2 18610457 18610740 -234645843 + MER21B LTR ERV1 518 802 -61 * 884 267 41 85 chr2 18610887 18610931 -234645652 - L1MEc LINE L1 -3191 3191 3147 1531 103 85 0 chr2 18610931 18611155 -234645428 + AluSp SINE Alu 62 304 -9 884 267 41 85 chr2 18611155 18611967 -234644616 - L1MEc LINE L1 -3235 3147 2373 206 176 33 66 chr2 18612253 18612344 -234644239 + T-rich Low_complexity Low_complexity 1 88 0 420 305 58 30 chr2 18612358 18612719 -234643864 - L1MEc LINE L1 -4642 1921 1551 2014 190 50 20 chr2 18612721 18613178 -234643405 - L1MC1 LINE L1 -204 6129 5659 290 249 51 8 chr2 18613196 18613322 -234643261 - L1MEc LINE L1 -4987 1531 1259 692 58 0 10 chr2 18614035 18614138 -234642445 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 192 291 18 18 chr2 18614965 18615020 -234641563 + MIR SINE MIR 86 140 -68 183 42 0 0 chr2 18615450 18615474 -234641109 + (ATG)n Simple_repeat Simple_repeat 2 25 0 190 345 103 26 chr2 18615795 18615911 -234640672 - L2 LINE L2 0 3272 3148 21 0 0 0 chr2 18618673 18618694 -234637889 + AT_rich Low_complexity Low_complexity 1 21 0 5931 129 15 38 chr2 18619619 18619815 -234636768 + Tigger1 DNA MER2_type 1 200 -2218 2426 72 0 0 chr2 18619815 18620106 -234636477 + AluY SINE Alu 1 291 -20 5931 129 15 38 chr2 18620106 18620894 -234635689 + Tigger1 DNA MER2_type 200 963 -1455 2228 127 33 30 chr2 18620895 18621258 -234635325 + THE1B LTR MaLR 1 364 0 * 8646 134 33 7 chr2 18621258 18622675 -234633908 + Tigger1 DNA MER2_type 964 2418 0 387 250 11 11 chr2 18622995 18623083 -234633500 + L2 LINE L2 3224 3311 -2 191 216 27 0 chr2 18624062 18624099 -234632484 - L2 LINE L2 -25 3247 3210 * 441 311 39 17 chr2 18624072 18624252 -234632331 - MIR SINE MIR -30 232 49 247 306 74 19 chr2 18625640 18625748 -234630835 - L2 LINE L2 -233 3039 2926 481 238 155 6 chr2 18625808 18625989 -234630594 - MER3 DNA MER1_type -1 208 1 223 306 57 48 chr2 18628260 18628384 -234628199 - MIR SINE MIR -130 132 8 2069 176 62 31 chr2 18629629 18630076 -234626507 + MER119 DNA MER1_type 4 464 -119 3955 78 25 88 chr2 18630076 18630747 -234625836 + MER4A LTR ERV1 1 629 -35 295 167 67 0 chr2 18630741 18630801 -234625782 + MER119 DNA MER1_type 479 542 -41 * 505 232 0 27 chr2 18631065 18631177 -234625406 + MIR SINE MIR 87 195 -67 187 288 68 0 chr2 18631218 18631277 -234625306 + MIR SINE MIR 200 262 0 390 279 181 72 chr2 18631774 18632317 -234624266 + L1M2 LINE L1 838 1374 -5475 855 158 0 149 chr2 18632786 18633007 -234623576 - MER5A DNA MER1_type -1 188 1 393 351 29 44 chr2 18634406 18634611 -234621972 + MIR SINE MIR 34 235 -27 343 284 55 0 chr2 18635993 18636120 -234620463 + MER94 DNA DNA 1 134 0 453 341 42 37 chr2 18636988 18637390 -234619193 - HAL1b LINE L1 -713 635 232 21 36 0 0 chr2 18637422 18637450 -234619133 + AT_rich Low_complexity Low_complexity 1 28 0 265 157 93 46 chr2 18638311 18638419 -234618164 + Charlie7 DNA MER1_type 2443 2555 -57 1166 311 71 19 chr2 18638441 18639030 -234617553 + L1ME1 LINE L1 51 670 -5753 723 277 85 21 chr2 18639128 18639363 -234617220 + L1ME1 LINE L1 974 1223 -5200 627 277 105 11 chr2 18639380 18639746 -234616837 + L1ME1 LINE L1 1335 1740 -4891 342 0 0 0 chr2 18639746 18639784 -234616799 + (CA)n Simple_repeat Simple_repeat 2 39 0 750 276 41 30 chr2 18639799 18640085 -234616498 + L1ME1 LINE L1 2156 2448 -4674 186 43 0 0 chr2 18640085 18640108 -234616475 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 750 276 41 30 chr2 18640108 18640184 -234616399 + L1ME1 LINE L1 2448 2522 -4600 403 200 11 21 chr2 18640274 18640369 -234616214 + MER4A LTR ERV1 5 98 -566 1431 159 5 8 chr2 18640369 18640693 -234615890 + MER4A LTR ERV1 261 664 0 2400 235 61 36 chr2 18640694 18641962 -234614621 + L1ME1 LINE L1 2608 3883 -3058 3170 250 90 31 chr2 18641972 18643343 -234613240 + L1ME1 LINE L1 4018 5469 -1472 414 0 0 0 chr2 18643377 18643423 -234613160 + (TA)n Simple_repeat Simple_repeat 1 46 0 388 216 34 34 chr2 18643535 18643711 -234612872 + A-rich Low_complexity Low_complexity 2 177 0 258 303 0 0 chr2 18643735 18643834 -234612749 + A-rich Low_complexity Low_complexity 1 99 0 198 0 0 0 chr2 18643962 18643984 -234612599 + (TA)n Simple_repeat Simple_repeat 2 23 0 2801 231 98 34 chr2 18643993 18644038 -234612545 + L1ME1 LINE L1 5497 5538 -1423 1978 115 56 0 chr2 18644038 18644325 -234612258 + AluSg SINE Alu 1 303 -7 2801 231 98 34 chr2 18644325 18645653 -234610930 + L1ME1 LINE L1 5538 6952 -9 270 56 0 0 chr2 18645663 18645699 -234610884 + (CA)n Simple_repeat Simple_repeat 2 37 0 1431 160 23 22 chr2 18646181 18647210 -234609373 + L1MA10 LINE L1 5133 6334 0 185 237 40 40 chr2 18647385 18647461 -234609122 + L3b LINE CR1 1327 1402 -181 23 68 0 0 chr2 18648340 18648384 -234608199 + AT_rich Low_complexity Low_complexity 1 44 0 374 308 23 8 chr2 18648631 18648764 -234607819 + L2 LINE L2 1680 1814 -1500 288 289 186 6 chr2 18649364 18649520 -234607063 - MIR SINE MIR -56 206 23 553 54 0 0 chr2 18649589 18649663 -234606920 + AluSc SINE Alu 229 302 -7 11061 182 17 24 chr2 18649671 18652548 -234604035 + L1PA15 LINE L1 2837 5684 -481 2258 103 0 3 chr2 18652548 18652849 -234603734 + AluSp SINE Alu 1 300 -13 11061 182 17 24 chr2 18652849 18653278 -234603305 + L1PA15 LINE L1 5684 6115 -50 528 255 56 46 chr2 18653374 18653590 -234602993 + L1ME LINE L1 5513 5730 -391 200 307 54 96 chr2 18653912 18654078 -234602505 - L2 LINE L2 -57 3215 3057 515 182 10 0 chr2 18655584 18655683 -234600900 - U6 snRNA snRNA 0 107 8 1657 180 81 3 chr2 18656951 18657284 -234599299 - MSTB LTR MaLR -63 363 5 801 303 94 39 chr2 18657291 18657674 -234598909 + L2 LINE L2 2910 3313 0 2330 111 0 0 chr2 18657749 18658046 -234598537 - AluSx SINE Alu -15 297 1 698 181 9 158 chr2 18658173 18658237 -234598346 - MER5A DNA MER1_type 0 189 117 2257 149 57 32 chr2 18658237 18658708 -234597875 + L1MD1 LINE L1 5753 6235 -7 698 181 9 158 chr2 18658708 18658864 -234597719 - MER5A DNA MER1_type -72 117 2 613 168 7 88 chr2 18659158 18659295 -234597288 + MER5B DNA MER1_type 5 130 -48 337 359 39 11 chr2 18659538 18659719 -234596864 + L2 LINE L2 2558 2743 -571 748 219 14 24 chr2 18659872 18660082 -234596501 - L1MB8 LINE L1 -12 6166 5959 293 314 111 26 chr2 18660121 18660274 -234596309 + MIR SINE MIR 21 186 -76 1715 212 137 70 chr2 18660655 18661268 -234595315 - MLT1E1 LTR MaLR 0 654 1 306 370 42 16 chr2 18661740 18661929 -234594654 + MIR SINE MIR 19 212 -50 472 270 17 35 chr2 18661986 18662160 -234594423 + MLT1H LTR MaLR 73 243 -306 2037 128 44 33 chr2 18662488 18662848 -234593735 - THE1B LTR MaLR 0 364 1 240 349 0 28 chr2 18663411 18663520 -234593063 + MIR SINE MIR 111 216 -46 496 265 153 0 chr2 18664575 18664764 -234591819 + MIR SINE MIR 30 247 -15 437 328 113 28 chr2 18665517 18665694 -234590889 + L2 LINE L2 3080 3271 -1 199 333 13 0 chr2 18665973 18666048 -234590535 + L2 LINE L2 2335 2410 -904 2802 237 178 11 chr2 18666445 18666852 -234589731 - L1MC4 LINE L1 -51 7991 7653 1946 144 34 7 chr2 18666852 18667144 -234589439 - AluJb SINE Alu -12 300 1 2802 237 178 11 chr2 18667144 18667869 -234588714 - L1MC4 LINE L1 -389 7653 6640 393 22 0 0 chr2 18667869 18667915 -234588668 + (CA)n Simple_repeat Simple_repeat 2 47 0 2802 237 178 11 chr2 18667915 18668000 -234588583 - L1MC4 LINE L1 -1402 6640 6570 186 111 56 0 chr2 18668487 18668523 -234588060 + L2 LINE L2 3234 3271 -1 311 305 182 5 chr2 18668696 18668883 -234587700 - MIR SINE MIR -11 251 32 2323 88 3 7 chr2 18669154 18669451 -234587132 + AluSx SINE Alu 1 296 -16 440 254 167 0 chr2 18669470 18669584 -234586999 - MIR3 SINE MIR -73 135 3 211 214 60 107 chr2 18669644 18669728 -234586855 - L2 LINE L2 -5 3308 3229 388 189 119 92 chr2 18670984 18671169 -234585414 - MIR SINE MIR -65 197 8 244 320 40 0 chr2 18672206 18672281 -234584302 + L2 LINE L2 3186 3263 -9 1605 307 95 40 chr2 18672325 18673221 -234583362 + L2 LINE L2 1925 2869 -445 784 130 29 120 chr2 18673697 18673905 -234582678 + MER53 DNA DNA 1 189 0 300 180 0 16 chr2 18674267 18674328 -234582255 - L1ME4a LINE L1 -4 6117 6058 274 216 49 39 chr2 18675874 18675976 -234580607 - MER69 DNA AcHobo -42 2484 2382 2077 171 18 5 chr2 18676378 18676758 -234579825 + MLT1B LTR MaLR 6 390 0 315 367 57 19 chr2 18677364 18677522 -234579061 + L2 LINE L2 3081 3244 -28 389 323 37 43 chr2 18677633 18677794 -234578789 - L2 LINE L2 -2 3270 3111 2742 158 8 11 chr2 18677950 18678418 -234578165 - MLT1C LTR MaLR 0 467 1 260 398 0 16 chr2 18678836 18678964 -234577619 + MER115 DNA AcHobo 158 283 -410 1568 221 40 118 chr2 18679276 18679877 -234576706 + MLT2B3 LTR ERVL 1 554 0 304 352 44 31 chr2 18680282 18680441 -234576142 + MER5A DNA MER1_type 29 189 0 1452 86 0 24 chr2 18680444 18680653 -234575930 - L1PA11 LINE L1 -2 6172 5969 1021 137 54 0 chr2 18680965 18681170 -234575413 + L1MA8 LINE L1 6057 6272 -19 551 230 81 6 chr2 18681627 18681788 -234574795 + MLT1B LTR MaLR 3 175 -215 9881 30 1 1 chr2 18681830 18683780 -234572803 - L1PA4 LINE L1 -8 6147 4197 880 210 20 0 chr2 18683854 18684049 -234572534 + MLT1B LTR MaLR 192 390 0 1149 232 16 0 chr2 18684132 18684378 -234572205 - MLT1E1 LTR MaLR 0 654 405 552 192 53 34 chr2 18684423 18684625 -234571958 - MLT1E1 LTR MaLR -394 260 1 406 344 75 0 chr2 18685342 18685502 -234571081 + L2 LINE L2 3100 3271 -1 2546 50 0 7 chr2 18686082 18686380 -234570203 - AluY SINE Alu -13 298 3 356 324 110 40 chr2 18687162 18687335 -234569248 - MIR3 SINE MIR -21 187 3 218 234 340 0 chr2 18687809 18687903 -234568680 - L2 LINE L2 -2 3270 3145 599 300 39 26 chr2 18688748 18688978 -234567605 - MIR SINE MIR -23 239 7 26 0 0 0 chr2 18689013 18689039 -234567544 + AT_rich Low_complexity Low_complexity 1 26 0 239 323 0 0 chr2 18689164 18689226 -234567357 + L3 LINE CR1 1511 1572 -5 421 288 14 7 chr2 18689400 18689536 -234567047 + MIR SINE MIR 31 144 -64 450 329 96 12 chr2 18689774 18689941 -234566642 - MIR3 SINE MIR -11 197 17 406 253 163 12 chr2 18690157 18690323 -234566260 + MIR SINE MIR 71 261 -1 686 176 8 8 chr2 18690924 18691084 -234565499 + AluJb SINE Alu 160 319 0 221 290 16 0 chr2 18691858 18691920 -234564663 + GA-rich Low_complexity Low_complexity 4 66 0 1797 173 84 11 chr2 18692709 18693078 -234563505 + MSTD LTR MaLR 1 396 0 283 328 86 8 chr2 18693207 18693335 -234563248 - L2 LINE L2 -3 3310 3173 312 354 42 14 chr2 18693344 18693488 -234563095 + MIR SINE MIR 45 192 -70 210 289 0 0 chr2 18693589 18693634 -234562949 + MIR SINE MIR 51 95 -167 383 83 17 0 chr2 18693658 18693718 -234562865 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 902 225 20 10 chr2 18693781 18693981 -234562602 - MER58A DNA MER1_type -18 206 5 185 284 23 34 chr2 18693999 18694087 -234562496 - L2 LINE L2 -86 3227 3141 23 33 0 0 chr2 18695070 18695100 -234561483 + AT_rich Low_complexity Low_complexity 1 30 0 189 175 0 0 chr2 18695122 18695162 -234561421 + (TA)n Simple_repeat Simple_repeat 1 40 0 478 287 25 13 chr2 18695180 18695337 -234561246 - MIR SINE MIR -72 190 32 2276 127 0 6 chr2 18695408 18695762 -234560821 - L1PB1 LINE L1 -1 6150 5799 847 245 148 30 chr2 18696385 18696817 -234559766 + L2 LINE L2 2831 3313 0 402 356 91 68 chr2 18697107 18697548 -234559035 - L2 LINE L2 0 3272 2822 2329 118 19 22 chr2 18697648 18698013 -234558570 + THE1B LTR MaLR 1 364 0 3925 84 61 77 chr2 18698013 18698705 -234557878 + THE1B-int LTR MaLR 1 681 -899 * 4299 131 35 6 chr2 18698702 18700096 -234556487 - L1PA11 LINE L1 -256 5918 4495 1148 141 4 70 chr2 18700128 18700245 -234556338 - L1PA12 LINE L1 -1547 6037 5945 2364 87 3 19 chr2 18700245 18700555 -234556028 - AluSg SINE Alu -5 305 1 1148 141 4 70 chr2 18700555 18700693 -234555890 - L1PA12 LINE L1 -1639 5945 5799 732 23 0 0 chr2 18700795 18700881 -234555702 + (TA)n Simple_repeat Simple_repeat 2 87 0 9154 203 14 16 chr2 18700895 18703098 -234553485 - L1PA12 LINE L1 -2763 4821 2622 2092 147 61 33 chr2 18703099 18703615 -234552968 + MLT2A2 LTR ERVL 1 554 0 6971 217 21 31 chr2 18703617 18703785 -234552798 - L1PA12 LINE L1 -4952 2632 2464 2488 54 0 7 chr2 18703785 18704083 -234552500 - AluY SINE Alu -15 296 1 6971 217 21 31 chr2 18704083 18705777 -234550806 - L1PA12 LINE L1 -5120 2464 1 492 242 42 81 chr2 18706914 18707199 -234549384 + L1M4 LINE L1 1525 1798 -4586 881 246 187 13 chr2 18707282 18707807 -234548776 + L1M4 LINE L1 2473 3088 -3294 195 161 32 32 chr2 18707812 18707874 -234548709 + GA-rich Low_complexity Low_complexity 3 64 0 681 235 85 54 chr2 18707875 18708228 -234548355 + L1M4 LINE L1 4929 5292 -1090 237 306 28 0 chr2 18708264 18708336 -234548247 - L2 LINE L2 -688 2626 2553 453 227 9 27 chr2 18708624 18708734 -234547849 + MIR SINE MIR 113 220 -42 972 163 0 7 chr2 18709314 18709467 -234547116 - FRAM SINE Alu -30 146 1 368 339 70 0 chr2 18710066 18710237 -234546346 - MIR SINE MIR -75 187 5 2394 80 0 3 chr2 18710948 18711250 -234545333 + AluY SINE Alu 1 301 -10 233 329 110 97 chr2 18711268 18711496 -234545087 - L2 LINE L2 -4 3268 3038 420 176 0 0 chr2 18711632 18711700 -234544883 + MIR SINE MIR 84 151 -111 246 231 96 96 chr2 18712164 18712268 -234544315 + MIR SINE MIR 138 241 -21 267 276 0 0 chr2 18714216 18714292 -234542291 + (TA)n Simple_repeat Simple_repeat 2 77 0 213 211 0 35 chr2 18715144 18715201 -234541382 + A-rich Low_complexity Low_complexity 6 60 0 266 253 67 27 chr2 18715335 18715410 -234541173 - L2 LINE L2 -8 3264 3187 422 271 46 20 chr2 18716311 18716462 -234540121 + MIR3 SINE MIR 30 184 -24 231 309 40 59 chr2 18717393 18717545 -234539038 + L2 LINE L2 3165 3313 0 183 184 0 0 chr2 18718089 18718127 -234538456 + (TG)n Simple_repeat Simple_repeat 1 38 0 2204 82 0 3 chr2 18718334 18718648 -234537935 + AluSg SINE Alu 1 313 0 28 0 0 0 chr2 18719287 18719315 -234537268 + AT_rich Low_complexity Low_complexity 1 28 0 206 382 53 0 chr2 18719673 18719749 -234536834 + L2 LINE L2 3132 3211 -61 431 325 133 21 chr2 18719928 18720162 -234536421 - MIR SINE MIR 0 262 3 314 257 0 14 chr2 18720974 18721044 -234535539 + MIR3 SINE MIR 117 185 -23 452 255 0 0 chr2 18721129 18721235 -234535348 + MIR SINE MIR 49 154 -108 1604 240 21 30 chr2 18721397 18721868 -234534715 - MLT1C LTR MaLR 0 467 1 237 196 36 0 chr2 18722976 18723032 -234533551 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 23 0 0 0 chr2 18723052 18723075 -234533508 + AT_rich Low_complexity Low_complexity 1 23 0 276 283 10 20 chr2 18723291 18723390 -234533193 + CT-rich Low_complexity Low_complexity 3 100 0 272 197 51 8 chr2 18723422 18723539 -234533044 + GA-rich Low_complexity Low_complexity 5 126 0 261 364 34 17 chr2 18723934 18724052 -234532531 + MIR3 SINE MIR 4 123 -85 2414 77 0 3 chr2 18725365 18725665 -234530918 + AluY SINE Alu 1 299 -12 185 81 0 54 chr2 18725854 18725891 -234530692 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 247 414 40 0 chr2 18726026 18726125 -234530458 - L2 LINE L2 -48 3224 3122 278 339 18 18 chr2 18726782 18726894 -234529689 + MIR SINE MIR 24 135 -73 363 121 0 0 chr2 18727103 18727161 -234529422 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 205 204 41 0 chr2 18728343 18728392 -234528191 + (TG)n Simple_repeat Simple_repeat 2 52 0 448 289 102 21 chr2 18729166 18729353 -234527230 + MIR SINE MIR 46 247 -15 342 289 183 0 chr2 18729591 18729826 -234526757 - HsTC2 DNA Tc2 -1010 888 611 2001 86 50 11 chr2 18730074 18730354 -234526229 - AluY SINE Alu -20 291 1 351 121 0 48 chr2 18730654 18730737 -234525846 + L1MA6 LINE L1 6220 6298 -2 2233 162 11 37 chr2 18730903 18731367 -234525216 - Tigger2 DNA MER2_type 0 2718 2267 326 194 15 0 chr2 18731351 18731418 -234525165 - Tigger2 DNA MER2_type -2649 69 2 * 335 299 37 9 chr2 18731613 18731720 -234524863 + MIR SINE MIR 32 141 -121 2311 111 30 25 chr2 18732370 18732732 -234523851 + THE1B LTR MaLR 1 364 0 6513 226 55 61 chr2 18734075 18735048 -234521535 - L1PB3 LINE L1 -2 7571 6594 1981 115 3 21 chr2 18735048 18735374 -234521209 - AluY SINE Alu 0 321 1 6513 226 55 61 chr2 18735374 18737005 -234519578 - L1PB3 LINE L1 -979 6594 4955 2234 37 0 0 chr2 18737005 18737277 -234519306 + L1PA4 LINE L1 5878 6149 -6 6513 226 55 61 chr2 18737277 18739653 -234516930 - L1PB3 LINE L1 -2618 4955 3628 2077 70 0 4 chr2 18739653 18739910 -234516673 - AluY SINE Alu -16 295 40 6513 226 55 61 chr2 18739910 18742816 -234513767 - L1PB3 LINE L1 -3945 3628 706 193 223 85 64 chr2 18742875 18742969 -234513614 + MIR SINE MIR 148 243 -19 24 67 0 0 chr2 18743365 18743410 -234513173 + AT_rich Low_complexity Low_complexity 1 45 0 272 328 95 53 chr2 18744220 18744409 -234512174 - MIR SINE MIR -16 246 50 2695 102 5 3 chr2 18744942 18745316 -234511267 + THE1C LTR MaLR 1 375 0 1417 280 170 61 chr2 18745782 18747305 -234509278 - L2 LINE L2 0 3313 1638 207 0 0 0 chr2 18748531 18748554 -234508029 + (T)n Simple_repeat Simple_repeat 1 23 0 21 0 0 0 chr2 18749193 18749214 -234507369 + AT_rich Low_complexity Low_complexity 1 21 0 255 274 186 0 chr2 18749952 18750065 -234506518 - MIR SINE MIR 0 262 129 2224 204 16 45 chr2 18750213 18750699 -234505884 + MER70A LTR ERVL 1 472 0 1920 118 7 3 chr2 18750881 18751169 -234505414 - AluSc SINE Alu 0 309 21 468 344 62 0 chr2 18751564 18751756 -234504827 + MIR SINE MIR 59 262 0 929 171 0 11 chr2 18752123 18752310 -234504273 + L1M4 LINE L1 5480 5657 -511 2984 214 32 10 chr2 18752318 18753014 -234503569 - L1PB3 LINE L1 -6845 720 10 243 256 98 0 chr2 18753696 18753778 -234502805 - MIR3 SINE MIR -10 198 109 234 352 132 0 chr2 18753797 18753888 -234502695 + L2 LINE L2 3146 3248 -24 216 300 0 0 chr2 18754290 18754340 -234502243 + (TG)n Simple_repeat Simple_repeat 2 51 0 487 179 74 99 chr2 18755150 18755312 -234501271 + Charlie8 DNA MER1_type 1 158 -2259 1255 231 141 53 chr2 18755420 18755852 -234500731 + MER21B LTR ERV1 12 481 -382 2072 184 88 7 chr2 18755853 18756531 -234500052 + L1MA9 LINE L1 4786 5506 -743 783 242 11 0 chr2 18756533 18756711 -234499872 + L1MA9 LINE L1 5599 5778 -534 213 39 0 0 chr2 18756722 18756748 -234499835 + (TCCA)n Simple_repeat Simple_repeat 3 28 0 43423 44 4 1 chr2 18756748 18762887 -234493696 - L1PA4 LINE L1 0 6155 3 1373 167 53 111 chr2 18762901 18762917 -234493666 + L1MA9 LINE L1 5811 5826 -486 2107 101 21 3 chr2 18762917 18763205 -234493378 + AluSc SINE Alu 1 293 -16 1373 167 53 111 chr2 18763205 18763638 -234492945 + L1MA9 LINE L1 5826 6234 -78 705 198 12 17 chr2 18763599 18763771 -234492812 - L1M2 LINE L1 -582 5730 5560 * 30 59 0 0 chr2 18763887 18763938 -234492645 + AT_rich Low_complexity Low_complexity 1 51 0 996 239 46 31 chr2 18763961 18764221 -234492362 + MER21B LTR ERV1 472 735 -128 2552 193 52 4 chr2 18764224 18764722 -234491861 + Tigger7 DNA MER2_type 1 522 -211 497 202 11 0 chr2 18764722 18764811 -234491772 + Tigger7 DNA MER2_type 2402 2491 0 336 292 165 49 chr2 18765328 18765794 -234490789 - L1ME4a LINE L1 -77 6044 5525 414 238 102 20 chr2 18765858 18766005 -234490578 - MIR SINE MIR -50 212 54 204 366 54 9 chr2 18766041 18766153 -234490430 - MIR SINE MIR -73 135 19 213 121 0 0 chr2 18766227 18766260 -234490323 + (TG)n Simple_repeat Simple_repeat 2 34 0 3557 258 114 28 chr2 18768929 18770522 -234486061 + HAL1 LINE L1 84 1813 -694 2495 157 59 0 chr2 18770593 18771019 -234485564 - LTR47A LTR ERVL -1 451 1 445 277 158 32 chr2 18771020 18771298 -234485285 + MLT1J2 LTR MaLR 77 389 -61 1379 281 96 20 chr2 18771343 18771987 -234484596 + HAL1 LINE L1 1815 2507 0 2395 249 38 4 chr2 18773823 18774740 -234481843 - L1M LINE L1 -767 5379 2479 1777 208 102 71 chr2 18774740 18775347 -234481236 - MLT1E2 LTR MaLR 0 626 1 766 218 93 19 chr2 18775518 18776025 -234480558 - L1MDb LINE L1 -3667 2739 2200 7272 134 31 55 chr2 18776027 18777355 -234479228 - HSMAR2 DNA Mariner -1 1301 6 3322 231 55 20 chr2 18777358 18778786 -234477797 - L1MDb LINE L1 -4211 2195 716 254 33 0 0 chr2 18779160 18779190 -234477393 - THE1B LTR MaLR -2 362 333 2372 101 24 6 chr2 18779388 18779724 -234476859 - THE1B LTR MaLR -22 342 1 1497 171 111 62 chr2 18780181 18780619 -234475964 + LTR56 LTR ERV1 1 436 -1 411 304 0 0 chr2 18780638 18780750 -234475833 - L1MDb LINE L1 -6276 133 22 285 271 64 7 chr2 18780847 18780987 -234475596 - L1ME4a LINE L1 -13 6108 5961 1040 159 88 100 chr2 18781287 18781626 -234474957 + LTR49 LTR ERV1 3 337 -258 799 193 0 53 chr2 18781755 18781942 -234474641 - FRAM SINE Alu 0 176 1 267 31 0 0 chr2 18782670 18782702 -234473881 + (ATG)n Simple_repeat Simple_repeat 1 32 0 222 337 0 47 chr2 18784112 18784198 -234472385 - L2 LINE L2 0 3313 3232 258 299 85 60 chr2 18784490 18784691 -234471892 - L2 LINE L2 0 3272 3067 250 338 46 22 chr2 18785146 18785314 -234471269 - MIR SINE MIR -57 205 32 255 326 54 16 chr2 18785529 18785658 -234470925 + MIR SINE MIR 39 172 -90 251 122 20 0 chr2 18786215 18786264 -234470319 + (CA)n Simple_repeat Simple_repeat 1 50 0 351 243 0 0 chr2 18786806 18786876 -234469707 + L2 LINE L2 3200 3269 -44 366 350 11 28 chr2 18787596 18787773 -234468810 - L1ME4a LINE L1 -201 5920 5747 1403 143 5 0 chr2 18788225 18788449 -234468134 + L1MB3 LINE L1 5545 5769 -414 1706 171 35 9 chr2 18788487 18788827 -234467756 + L1MB3 LINE L1 5759 6107 -76 1578 96 14 0 chr2 18789263 18789483 -234467100 + MLT2A2 LTR ERVL 1 223 -230 622 71 0 0 chr2 18789483 18789568 -234467015 + MLT2A2 LTR ERVL 369 453 0 216 97 0 0 chr2 18790759 18790790 -234465793 + (TA)n Simple_repeat Simple_repeat 2 32 0 2170 134 0 0 chr2 18791110 18791408 -234465175 - AluSx SINE Alu -14 298 1 3817 143 68 52 chr2 18791618 18792432 -234464151 + L1MA9 LINE L1 5473 6299 -13 203 219 82 82 chr2 18792982 18793055 -234463528 + MIR SINE MIR 28 100 -162 22 35 0 0 chr2 18793324 18793353 -234463230 + AT_rich Low_complexity Low_complexity 1 29 0 357 281 28 40 chr2 18794032 18794283 -234462300 - HAL1b LINE L1 -79 2428 793 1801 163 52 0 chr2 18794326 18794614 -234461969 + AluSx SINE Alu 4 306 -6 1757 181 10 3 chr2 18794618 18794921 -234461662 + AluJb SINE Alu 1 305 -7 333 181 32 11 chr2 18794928 18795022 -234461561 + GA-rich Low_complexity Low_complexity 1 96 0 2062 150 12 0 chr2 18795058 18795391 -234461192 + MER1B DNA MER1_type 1 337 0 527 293 14 0 chr2 18795557 18795704 -234460879 + MIR SINE MIR 82 230 -32 1638 193 49 21 chr2 18796078 18796508 -234460075 - L1PB4 LINE L1 -824 5322 4881 4872 132 8 56 chr2 18796508 18797397 -234459186 + L1PB4 LINE L1 5308 6153 -3 311 310 11 0 chr2 18797774 18797861 -234458722 + L1M4b LINE L1 1360 1447 -5412 453 257 74 68 chr2 18798015 18798509 -234458074 + L1M4b LINE L1 1788 2283 -4674 13289 83 8 8 chr2 18798509 18800512 -234456071 + L1PA7 LINE L1 3532 5553 -601 8207 72 8 4 chr2 18800512 18801579 -234455004 + MER11C LTR ERVK 1 1071 0 13289 83 8 8 chr2 18801579 18802179 -234454404 + L1PA7 LINE L1 5552 6151 -3 453 257 74 68 chr2 18802179 18802306 -234454277 + L1M4b LINE L1 2283 2408 -4549 342 211 53 0 chr2 18802405 18802500 -234454083 + MLT1I LTR MaLR 304 403 -6 576 235 174 0 chr2 18802641 18802773 -234453810 - MER5A DNA MER1_type -6 183 29 1683 298 79 32 chr2 18802932 18804223 -234452360 - L1MEd LINE L1 -4480 1649 268 1683 182 28 25 chr2 18804317 18804679 -234451904 + MLT1A1 LTR MaLR 1 363 -2 577 323 53 8 chr2 18806207 18806459 -234450124 + MIR SINE MIR 5 262 0 198 325 162 52 chr2 18808241 18808432 -234448151 - MIR SINE MIR -31 231 20 233 279 19 87 chr2 18808864 18808968 -234447615 + MIR3 SINE MIR 67 163 -45 206 274 0 107 chr2 18809039 18809123 -234447460 - L2 LINE L2 -5 3308 3234 285 209 60 0 chr2 18809202 18809269 -234447314 - MLT1I LTR MaLR -8 401 331 354 245 86 26 chr2 18809447 18809598 -234446985 - MLT1J2 LTR MaLR -290 160 1 820 176 6 42 chr2 18810043 18810208 -234446375 - FRAM SINE Alu -7 159 1 22 0 0 0 chr2 18810299 18810321 -234446262 + AT_rich Low_complexity Low_complexity 1 22 0 2571 219 22 2 chr2 18810330 18810920 -234445663 - L1ME1 LINE L1 -6 6160 5559 223 278 221 11 chr2 18811087 18811210 -234445373 + MIR SINE MIR 29 183 -65 * 581 273 118 46 chr2 18811209 18811447 -234445136 + MIR SINE MIR 8 262 0 2264 121 0 6 chr2 18811522 18811836 -234444747 + AluSx SINE Alu 1 312 0 664 227 8 0 chr2 18811972 18812100 -234444483 + FLAM_A SINE Alu 1 129 -4 438 254 0 0 chr2 18812676 18812794 -234443789 - L1MC4 LINE L1 -1 8041 7924 519 251 18 31 chr2 18812833 18813060 -234443523 - L1MC4 LINE L1 -128 7914 7691 663 258 99 44 chr2 18813069 18813328 -234443255 - L1MC4a LINE L1 -1279 6529 6235 1824 83 4 11 chr2 18813328 18813592 -234442991 - L1PA8 LINE L1 0 6172 5911 663 258 99 44 chr2 18813592 18813767 -234442816 - L1MC4a LINE L1 -1573 6235 6071 207 222 33 22 chr2 18814778 18814868 -234441715 + (TA)n Simple_repeat Simple_repeat 2 92 0 329 342 57 16 chr2 18915813 18916006 -234340577 - L2 LINE L2 -234 3038 2838 2173 178 73 9 chr2 18916423 18916862 -234339721 + MLT1C LTR MaLR 1 467 0 24 32 0 0 chr2 18917162 18917193 -234339390 + AT_rich Low_complexity Low_complexity 1 31 0 191 167 42 28 chr2 18917433 18917505 -234339078 + GA-rich Low_complexity Low_complexity 3 75 0 333 0 0 0 chr2 18919566 18919603 -234336980 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 36 0 0 chr2 18919703 18919731 -234336852 + AT_rich Low_complexity Low_complexity 1 28 0 777 154 27 58 chr2 18919941 18919968 -234336615 + L1MA7 LINE L1 6108 6134 -157 1796 158 0 17 chr2 18919968 18920266 -234336317 - AluJb SINE Alu -19 293 1 777 154 27 58 chr2 18920266 18920426 -234336157 + L1MA7 LINE L1 6134 6289 -2 22 0 0 0 chr2 18920640 18920662 -234335921 + AT_rich Low_complexity Low_complexity 1 22 0 2003 127 68 14 chr2 18920718 18921073 -234335510 + THE1C LTR MaLR 2 375 0 311 304 20 0 chr2 18923527 18923629 -234332954 - MLT1J2 LTR MaLR 0 450 347 215 313 31 0 chr2 18923632 18923696 -234332887 + (CATG)n Simple_repeat Simple_repeat 2 67 0 293 263 113 0 chr2 18923708 18923788 -234332795 - MLT1J1 LTR MaLR -117 329 241 507 228 52 15 chr2 18923789 18923925 -234332658 - MLT1J2 LTR MaLR -240 210 70 453 220 0 119 chr2 18924157 18924316 -234332267 - MIR SINE MIR -2 260 121 366 298 71 34 chr2 18924458 18925273 -234331310 - L1MEd LINE L1 -2920 3209 2365 783 166 0 190 chr2 18925318 18925602 -234330981 + L1M4 LINE L1 4868 5097 -1049 633 259 32 37 chr2 18925640 18925829 -234330754 + MER58A DNA MER1_type 34 221 -3 349 335 66 19 chr2 18925882 18926139 -234330444 - HAL1 LINE L1 -753 1754 1486 232 306 24 16 chr2 18926402 18926526 -234330057 - L1MEd LINE L1 -5129 990 866 276 303 28 62 chr2 18927813 18928137 -234328446 + HAL1 LINE L1 2001 2313 -194 436 252 9 9 chr2 18928314 18928429 -234328154 + L1PA16 LINE L1 6046 6160 -6 8246 84 2 0 chr2 18928436 18929557 -234327026 - L1P LINE L1 -1833 4313 3191 7057 62 0 0 chr2 18929558 18930658 -234325925 + L1PA7 LINE L1 5037 6148 -6 856 276 30 8 chr2 18930690 18930958 -234325625 - MER97c DNA MER1_type? -570 520 247 76 61 0 0 chr2 18930968 18931100 -234325483 + AT_rich Low_complexity Low_complexity 1 132 0 26 30 0 0 chr2 18931149 18931182 -234325401 + AT_rich Low_complexity Low_complexity 1 33 0 643 207 78 47 chr2 18931231 18931424 -234325159 - MER97a DNA MER1_type? -640 254 56 6861 157 24 9 chr2 18933513 18934725 -234321858 - Tigger3b DNA MER2_type -1 1230 1 200 282 186 16 chr2 18935309 18935433 -234321150 - MIR SINE MIR -53 209 65 317 306 22 0 chr2 18936605 18936785 -234319798 + L1ME4a LINE L1 5691 5874 -247 6745 65 2 4 chr2 18936798 18938079 -234318504 - L1PA7 LINE L1 0 6154 4865 6443 95 0 0 chr2 18938079 18938966 -234317617 + L1PA7 LINE L1 3976 4862 -1284 1154 283 16 10 chr2 18939014 18939322 -234317261 + HsTC2b DNA Tc2 10 319 -596 2819 255 41 18 chr2 18939324 18940297 -234316286 + L1M4 LINE L1 4044 5039 -1107 1847 188 33 0 chr2 18941630 18941966 -234314617 + MER7A DNA MER2_type 1 345 -1 21 0 0 0 chr2 18942001 18942022 -234314561 + AT_rich Low_complexity Low_complexity 1 21 0 219 36 0 0 chr2 18942148 18942176 -234314407 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2414 40 0 30 chr2 18942178 18942482 -234314101 - AluY SINE Alu -16 295 1 22 0 0 0 chr2 18942488 18942510 -234314073 + AT_rich Low_complexity Low_complexity 1 22 0 2308 69 0 3 chr2 18942556 18942847 -234313736 - AluY SINE Alu -21 290 1 26 30 0 0 chr2 18942855 18942888 -234313695 + AT_rich Low_complexity Low_complexity 1 33 0 2270 163 75 5 chr2 18944255 18944655 -234311928 - MSTA LTR MaLR 0 428 1 349 246 183 0 chr2 18944660 18944802 -234311781 - MIR SINE MIR -2 260 93 381 301 145 62 chr2 18944946 18945401 -234311182 - L1ME4a LINE L1 -56 6065 5573 26 0 0 0 chr2 18945779 18945805 -234310778 + AT_rich Low_complexity Low_complexity 1 26 0 32 0 0 0 chr2 18945941 18945973 -234310610 + AT_rich Low_complexity Low_complexity 1 32 0 23 68 0 0 chr2 18946107 18946151 -234310432 + AT_rich Low_complexity Low_complexity 1 44 0 202 182 0 0 chr2 18946401 18946434 -234310149 + (TG)n Simple_repeat Simple_repeat 2 34 0 2551 52 7 0 chr2 18947011 18947316 -234309267 - AluY SINE Alu -4 307 1 22 56 0 0 chr2 18947531 18947567 -234309016 + AT_rich Low_complexity Low_complexity 1 36 0 27 65 0 26 chr2 18947653 18947675 -234308908 + AT_rich Low_complexity Low_complexity 1 22 -53 1486 96 36 0 chr2 18947675 18947894 -234308689 + L1PA10 LINE L1 5942 6168 0 27 65 0 26 chr2 18947894 18947948 -234308635 + AT_rich Low_complexity Low_complexity 22 75 0 1989 108 54 0 chr2 18948148 18948425 -234308158 + AluSg SINE Alu 1 292 -18 233 92 58 23 chr2 18948425 18948512 -234308071 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 316 306 52 43 chr2 18949189 18949513 -234307070 + L1MC4a LINE L1 5268 5594 -2214 372 328 34 60 chr2 18949536 18949771 -234306812 + L1MC4a LINE L1 5682 5910 -1898 2160 128 0 0 chr2 18949773 18950078 -234306505 - AluSq SINE Alu -8 305 1 28 71 0 0 chr2 18950300 18950356 -234306227 + AT_rich Low_complexity Low_complexity 1 56 0 282 206 0 0 chr2 18950668 18950736 -234305847 + (ATG)n Simple_repeat Simple_repeat 3 70 0 8615 138 26 15 chr2 18951279 18952681 -234303902 + Tigger1 DNA MER2_type 84 1501 -917 2425 140 3 0 chr2 18952681 18953060 -234303523 - Tigger1 DNA MER2_type -356 2062 1683 776 202 104 0 chr2 18953269 18953452 -234303131 - MER105 DNA DNA -1 203 2 290 282 10 10 chr2 18953489 18953592 -234302991 + MLT1L LTR MaLR 513 615 0 3436 235 66 35 chr2 18954200 18954907 -234301676 + L1ME1 LINE L1 4099 4783 -1383 1987 109 32 14 chr2 18954907 18955024 -234301559 + AluSc SINE Alu 3 116 -193 207 0 0 0 chr2 18955024 18955047 -234301536 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1987 109 32 14 chr2 18955047 18955213 -234301370 + AluSc SINE Alu 116 291 -18 3436 235 66 35 chr2 18955213 18956476 -234300107 + L1ME1 LINE L1 4783 6120 -46 180 158 0 0 chr2 18956941 18956979 -234299604 + (TA)n Simple_repeat Simple_repeat 2 39 0 288 0 0 0 chr2 18956981 18957013 -234299570 + (TC)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr2 18957012 18957037 -234299546 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 1392 183 28 41 chr2 18957573 18957951 -234298632 + MLT1C LTR MaLR 3 442 -25 742 239 144 1 chr2 18958322 18958625 -234297958 - MER57A LTR ERV1 -12 391 69 2360 99 7 0 chr2 18958627 18958931 -234297652 - AluSg SINE Alu -4 306 1 1500 93 13 49 chr2 18958931 18959156 -234297427 - AluSq SINE Alu -14 299 83 411 364 8 0 chr2 18959549 18959678 -234296905 - L2 LINE L2 0 3272 3143 1147 187 60 4 chr2 18960887 18961155 -234295428 + L1MC3 LINE L1 7476 7758 -27 1627 156 39 0 chr2 18962283 18962540 -234294043 - AluJb SINE Alu -45 267 1 10639 203 12 17 chr2 18963034 18966494 -234290089 + L1PB3 LINE L1 2712 6154 0 688 245 75 43 chr2 18966528 18966904 -234289679 + L1MC4 LINE L1 7654 8041 -1 417 287 161 31 chr2 18966971 18967326 -234289257 + L1ME4a LINE L1 5535 5935 -186 192 77 0 0 chr2 18967417 18967443 -234289140 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1060 154 0 6 chr2 18969942 18970104 -234286479 + FRAM SINE Alu 1 160 -16 2234 113 7 3 chr2 18971612 18971913 -234284670 - AluSq SINE Alu -11 302 1 183 205 0 0 chr2 18972150 18972189 -234284394 + CT-rich Low_complexity Low_complexity 2 40 0 213 311 16 0 chr2 18972904 18972965 -234283618 - MER91B DNA MER1_type -119 71 10 253 333 22 0 chr2 18972975 18973065 -234283518 - MIR3 SINE MIR -3 205 114 2311 84 0 0 chr2 18973259 18973546 -234283037 + AluSc SINE Alu 1 287 -22 441 286 70 60 chr2 18973866 18974051 -234282532 + MIR3 SINE MIR 13 199 -9 183 42 0 0 chr2 18975001 18975025 -234281558 + (GA)n Simple_repeat Simple_repeat 2 25 0 256 286 78 0 chr2 18975527 18975604 -234280979 + MIR3 SINE MIR 78 160 -48 410 218 96 102 chr2 18975606 18975803 -234280780 - MER102b DNA MER1_type -1 340 145 1039 229 175 16 chr2 18975813 18976201 -234280382 - MLT2B2 LTR ERVL -65 450 1 1508 234 58 42 chr2 18976223 18976705 -234279878 + MLT1E2 LTR MaLR 135 624 -2 227 251 6 75 chr2 18977017 18977123 -234279460 - MIR SINE MIR -52 156 88 264 248 30 69 chr2 18977247 18977348 -234279235 - MIR SINE MIR -102 160 64 202 283 0 17 chr2 18978200 18978260 -234278323 + L3 LINE CR1 1518 1576 -1 1035 257 84 42 chr2 18978628 18978994 -234277589 + MLT1E LTR MaLR 1 385 -208 401 63 21 179 chr2 18978994 18979058 -234277525 - MADE1 DNA Mariner 0 80 34 2381 72 0 3 chr2 18979058 18979349 -234277234 - AluY SINE Alu -11 300 11 401 63 21 179 chr2 18979349 18979379 -234277204 - MADE1 DNA Mariner -46 34 1 1035 257 84 42 chr2 18979379 18979597 -234276986 + MLT1E LTR MaLR 385 592 -1 250 326 138 0 chr2 18980263 18980401 -234276182 - MIR3 SINE MIR -19 189 33 237 313 9 18 chr2 18981011 18981123 -234275460 + GA-rich Low_complexity Low_complexity 5 115 0 220 302 24 63 chr2 18982362 18982488 -234274095 + MIR SINE MIR 61 181 -81 218 209 0 0 chr2 18982603 18982646 -234273937 + L2 LINE L2 3263 3305 -8 222 318 24 24 chr2 18983354 18983439 -234273144 + L2 LINE L2 2897 2981 -291 196 339 17 0 chr2 18983454 18983513 -234273070 + L2 LINE L2 3116 3175 -97 926 182 86 0 chr2 18983601 18983788 -234272795 + MER3 DNA MER1_type 7 209 0 312 160 0 0 chr2 18983745 18983795 -234272788 - MER3 DNA MER1_type -119 90 41 * 238 329 12 0 chr2 18984686 18984768 -234271815 - MIR SINE MIR -72 136 54 * 389 305 108 15 chr2 18984756 18984959 -234271624 - L3 LINE CR1 -925 652 431 223 356 91 30 chr2 18987629 18987761 -234268822 - MIR3 SINE MIR -63 145 6 259 219 19 38 chr2 18988479 18988584 -234267999 + (TA)n Simple_repeat Simple_repeat 2 104 0 205 346 79 64 chr2 18989237 18989517 -234267066 - L2 LINE L2 -53 3219 2936 427 316 120 44 chr2 18991402 18991627 -234264956 - MIR SINE MIR -13 249 8 335 253 33 22 chr2 18993264 18993355 -234263228 + MIR SINE MIR 49 140 -68 215 208 38 38 chr2 18993385 18993438 -234263145 - MER5A DNA MER1_type -74 115 63 269 260 0 13 chr2 18993733 18993810 -234262773 - MLT1J2 LTR MaLR -14 436 361 2276 99 0 13 chr2 18994082 18994396 -234262187 + AluY SINE Alu 1 310 -1 186 43 0 0 chr2 18995098 18995121 -234261462 + (GA)n Simple_repeat Simple_repeat 1 23 0 196 237 34 0 chr2 18995331 18995390 -234261193 - L2 LINE L2 -528 2786 2726 450 312 59 10 chr2 18995489 18995691 -234260892 + MLT1J LTR MaLR 3 214 -297 754 253 0 22 chr2 18995794 18996019 -234260564 - L1M4 LINE L1 -1239 4907 4688 409 231 49 107 chr2 18996021 18996264 -234260319 + MER112 DNA MER1_type 25 253 -7 324 307 49 19 chr2 18996580 18996752 -234259831 - MIR SINE MIR -55 207 30 557 194 34 27 chr2 18996917 18997078 -234259505 + MLT1J LTR MaLR 295 511 0 30084 103 16 22 chr2 18998785 19001331 -234255252 + L1PA7 LINE L1 5 2564 -3905 239 0 0 31 chr2 19001331 19001363 -234255220 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 30084 103 16 22 chr2 19001363 19005177 -234251406 + L1PA7 LINE L1 2564 6398 -71 203 61 30 0 chr2 19005177 19005210 -234251373 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 30084 103 16 22 chr2 19005210 19005221 -234251362 + L1PA7 LINE L1 6398 6408 -61 2269 108 23 0 chr2 19005221 19005527 -234251056 + AluSp SINE Alu 1 313 0 766 247 81 9 chr2 19005534 19005687 -234250896 - L1MD2 LINE L1 -55 6304 6129 * 300 53 0 0 chr2 19005687 19005725 -234250858 + (TG)n Simple_repeat Simple_repeat 2 39 0 766 247 81 9 chr2 19005725 19005794 -234250789 - L1MD2 LINE L1 -230 6129 6066 186 342 108 32 chr2 19006862 19007020 -234249563 + L2 LINE L2 2890 3059 -213 386 352 40 5 chr2 19007788 19007987 -234248596 - MIR SINE MIR -1 261 56 710 234 114 26 chr2 19010384 19010554 -234246029 - MIR SINE MIR -8 254 58 2130 161 72 15 chr2 19010554 19010957 -234245626 - MSTB LTR MaLR 0 426 1 710 234 114 26 chr2 19010957 19011013 -234245570 - MIR SINE MIR -204 58 8 313 301 59 65 chr2 19011067 19011253 -234245330 - L3 LINE CR1 -146 1431 1247 443 266 96 0 chr2 19011437 19011666 -234244917 + L1ME4a LINE L1 5675 5925 -196 372 197 239 0 chr2 19012142 19012259 -234244324 + MER53 DNA DNA 38 182 -7 2406 85 7 0 chr2 19012587 19012893 -234243690 + AluY SINE Alu 4 311 0 226 259 304 0 chr2 19013630 19013742 -234242841 - MIR SINE MIR -109 153 8 310 344 90 33 chr2 19013886 19014130 -234242453 - L2 LINE L2 -631 2683 2426 236 227 45 80 chr2 19016063 19016151 -234240432 - L2 LINE L2 0 3313 3229 872 338 83 28 chr2 19016363 19017038 -234239545 - L2 LINE L2 -376 2938 2227 194 233 0 23 chr2 19017336 19017379 -234239204 + L2 LINE L2 3222 3263 -9 292 247 0 12 chr2 19017423 19017504 -234239079 + L3 LINE CR1 1444 1523 -54 236 308 164 27 chr2 19017792 19017938 -234238645 + MIR3 SINE MIR 41 206 -2 233 265 91 83 chr2 19018074 19018206 -234238377 - MIR SINE MIR -109 153 21 263 279 0 0 chr2 19019105 19019173 -234237410 + HERVL LTR ERVL 4778 4845 -809 264 276 40 13 chr2 19019972 19020048 -234236535 + L2 LINE L2 3191 3268 -4 231 227 7 40 chr2 19020051 19020201 -234236382 + GA-rich Low_complexity Low_complexity 4 148 0 1026 142 0 17 chr2 19020353 19020641 -234235942 + (GGAA)n Simple_repeat Simple_repeat 4 284 0 398 355 33 0 chr2 19021654 19021806 -234234777 + MIR3 SINE MIR 29 185 -23 2310 97 3 0 chr2 19022499 19022799 -234233784 - AluSg SINE Alu -9 301 1 911 20 0 0 chr2 19022808 19022957 -234233626 - AluYb8 SINE Alu 0 336 188 471 135 0 0 chr2 19024358 19024432 -234232151 + LTR32 LTR ERVL 15 88 -383 1217 157 12 44 chr2 19024447 19024695 -234231888 + LTR32 LTR ERVL 232 471 0 500 353 45 0 chr2 19025246 19025447 -234231136 + MIR SINE MIR 50 259 -3 225 238 30 38 chr2 19026597 19026689 -234229894 - MIR SINE MIR -59 149 52 32 75 0 0 chr2 19026824 19026891 -234229692 + AT_rich Low_complexity Low_complexity 1 67 0 30 0 0 0 chr2 19027272 19027302 -234229281 + AT_rich Low_complexity Low_complexity 1 30 0 393 225 136 78 chr2 19027468 19027659 -234228924 - MIR SINE MIR -11 251 50 273 151 0 0 chr2 19030093 19030146 -234226437 + (CA)n Simple_repeat Simple_repeat 2 54 0 564 237 96 6 chr2 19030668 19030845 -234225738 - MER3 DNA MER1_type -2 207 15 252 296 38 75 chr2 19031569 19031728 -234224855 + MIR SINE MIR 54 206 -56 242 368 39 26 chr2 19032635 19032790 -234223793 + MIR SINE MIR 20 176 -86 215 319 0 0 chr2 19034203 19034275 -234222308 + L2 LINE L2 3242 3313 0 3092 188 79 17 chr2 19034559 19035340 -234221243 + L1MB2 LINE L1 5340 6169 -2 21 0 0 0 chr2 19035367 19035388 -234221195 + AT_rich Low_complexity Low_complexity 1 21 0 1931 142 25 0 chr2 19035613 19035910 -234220673 - AluSx SINE Alu 0 306 3 228 208 228 10 chr2 19035950 19036051 -234220532 - L1ME LINE L1 -425 5696 5574 35 0 0 0 chr2 19036440 19036475 -234220108 + AT_rich Low_complexity Low_complexity 1 35 0 547 256 71 50 chr2 19036698 19036936 -234219647 - MIR SINE MIR -18 244 2 686 291 14 38 chr2 19037560 19037770 -234218813 - MIR SINE MIR -45 217 13 194 103 0 26 chr2 19038494 19038533 -234218050 + (TAAAAA)n Simple_repeat Simple_repeat 4 41 0 687 196 78 7 chr2 19040369 19040522 -234216061 - MER96 DNA MER1_type? 0 175 12 272 389 51 5 chr2 19044992 19045208 -234211375 + L2 LINE L2 2631 2856 -458 405 313 17 0 chr2 19045342 19045457 -234211126 + L2 LINE L2 3143 3259 -13 330 304 50 44 chr2 19045480 19045661 -234210922 + L2 LINE L2 3118 3299 -14 646 254 85 10 chr2 19045785 19045986 -234210597 + MER58A DNA MER1_type 4 219 -5 352 306 25 0 chr2 19045998 19046119 -234210464 + MIR SINE MIR 138 261 -1 291 309 27 9 chr2 19046328 19046438 -234210145 - MIR SINE MIR -103 159 48 771 298 78 35 chr2 19046613 19047100 -234209483 + L1ME3 LINE L1 5369 5876 -286 23 0 0 0 chr2 19047391 19047414 -234209169 + AT_rich Low_complexity Low_complexity 1 23 0 193 430 37 9 chr2 19047433 19047540 -234209043 - L2 LINE L2 -22 3250 3141 468 0 0 0 chr2 19049276 19049328 -234207255 + (TG)n Simple_repeat Simple_repeat 2 53 0 746 298 25 44 chr2 19051026 19051342 -234205241 + L2 LINE L2 2991 3300 -13 406 211 26 9 chr2 19051363 19051477 -234205106 - MER97b DNA MER1_type? 0 1053 938 30 59 0 0 chr2 19051501 19051552 -234205031 + AT_rich Low_complexity Low_complexity 1 51 0 605 198 101 48 chr2 19051688 19051936 -234204647 - MER97b DNA MER1_type? -194 859 599 255 61 0 0 chr2 19051938 19051971 -234204612 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5804 208 22 14 chr2 19052032 19053511 -234203072 + L1P LINE L1 3862 5352 -794 5601 111 7 0 chr2 19153511 19154532 -234102051 - L1PA11 LINE L1 -100 6074 5049 545 304 54 38 chr2 19154723 19154963 -234101620 + L3 LINE CR1 1104 1347 -230 587 172 166 0 chr2 19155254 19155423 -234101160 + MER5C DNA MER1_type 128 324 0 27 29 0 0 chr2 19155559 19155593 -234100990 + AT_rich Low_complexity Low_complexity 1 34 0 710 311 43 48 chr2 19155660 19156055 -234100528 + L3 LINE CR1 1128 1520 -57 1766 133 4 8 chr2 19156283 19156538 -234100045 - AluSx SINE Alu -54 258 5 1787 109 0 0 chr2 19156539 19156804 -234099779 - L1P4 LINE L1 -484 5681 5417 1058 123 36 36 chr2 19156804 19156989 -234099594 + L1MA9 LINE L1 6118 6312 0 391 307 86 7 chr2 19157175 19157315 -234099268 - L2 LINE L2 0 3313 3163 270 81 0 0 chr2 19157335 19157372 -234099211 + (TG)n Simple_repeat Simple_repeat 1 37 0 232 215 0 31 chr2 19158849 19158914 -234097669 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 2829 172 47 40 chr2 19159096 19159177 -234097406 - L1MA9 LINE L1 0 6312 6233 207 0 0 0 chr2 19159177 19159200 -234097383 + (TA)n Simple_repeat Simple_repeat 2 24 0 2829 172 47 40 chr2 19159200 19159645 -234096938 - L1MA9 LINE L1 -79 6233 5779 338 0 24 0 chr2 19159645 19159687 -234096896 + (CA)n Simple_repeat Simple_repeat 1 43 0 2829 172 47 40 chr2 19159687 19159751 -234096832 - L1MA9 LINE L1 -533 5779 5717 216 356 111 30 chr2 19159794 19160162 -234096421 - L2 LINE L2 -559 2755 2358 454 230 236 6 chr2 19160173 19160334 -234096249 - MIR SINE MIR -1 261 64 219 278 103 31 chr2 19160612 19160709 -234095874 - L2 LINE L2 -13 3300 3197 831 212 104 0 chr2 19162393 19162592 -234093991 - MIR SINE MIR -10 252 35 180 331 143 19 chr2 19162955 19163109 -234093474 + MIR3 SINE MIR 36 208 0 1963 182 35 30 chr2 19163172 19163719 -234092864 - MLT2A2 LTR ERVL 0 554 1 227 346 98 45 chr2 19164111 19164244 -234092339 + MIR3 SINE MIR 21 160 -48 2115 93 61 0 chr2 19165671 19165951 -234090632 + AluY SINE Alu 1 297 -14 294 143 18 0 chr2 19166221 19166277 -234090306 + L1MA8 LINE L1 6232 6288 -3 25 51 0 0 chr2 19166594 19166633 -234089950 + AT_rich Low_complexity Low_complexity 1 39 0 2198 139 27 3 chr2 19166640 19166977 -234089606 - MER7A DNA MER2_type -1 345 3 279 247 0 0 chr2 19167317 19167390 -234089193 + (CATA)n Simple_repeat Simple_repeat 4 76 0 518 293 93 36 chr2 19167521 19167746 -234088837 + MIR SINE MIR 12 249 -13 226 220 110 33 chr2 19170030 19170121 -234086462 + MIR3 SINE MIR 1 98 -110 339 322 115 6 chr2 19171794 19171968 -234084615 - MIR SINE MIR -48 214 22 199 70 23 23 chr2 19171969 19172012 -234084571 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 30611 101 8 12 chr2 19172027 19172700 -234083883 - L1PA7 LINE L1 0 6154 5479 2250 86 0 30 chr2 19172700 19173002 -234083581 - AluY SINE Alu -18 293 1 30611 101 8 12 chr2 19173002 19177667 -234078916 - L1PA7 LINE L1 -675 5479 845 2303 100 0 0 chr2 19177671 19177970 -234078613 - AluY SINE Alu -12 299 1 189 330 60 20 chr2 19178241 19178341 -234078242 + L2 LINE L2 3150 3253 -19 267 221 116 47 chr2 19178943 19179029 -234077554 + L2 LINE L2 3162 3253 -19 2144 194 145 24 chr2 19179312 19179890 -234076693 + L1MC4 LINE L1 7376 8023 -19 681 274 114 13 chr2 19179943 19180180 -234076403 + MIR SINE MIR 2 262 0 339 323 75 10 chr2 19180243 19180444 -234076139 - MIR SINE MIR -11 251 38 339 305 114 96 chr2 19182505 19182777 -234073806 + L2 LINE L2 2993 3269 -3 237 108 0 0 chr2 19184077 19184114 -234072469 + (CA)n Simple_repeat Simple_repeat 1 37 0 249 211 0 0 chr2 19186582 19186639 -234069944 + (TG)n Simple_repeat Simple_repeat 2 58 0 216 0 0 0 chr2 19186889 19186913 -234069670 + (GA)n Simple_repeat Simple_repeat 2 25 0 876 115 15 0 chr2 19188191 19188321 -234068262 + AluSg/x SINE Alu 177 308 -2 250 210 0 65 chr2 19188345 19188407 -234068176 - MER81 DNA DNA -56 58 1 356 299 98 18 chr2 19188711 19188875 -234067708 + MIR SINE MIR 2 178 -84 2075 132 0 7 chr2 19188930 19189226 -234067357 + AluSc SINE Alu 1 294 -15 207 100 0 0 chr2 19190738 19190768 -234065815 + (TG)n Simple_repeat Simple_repeat 1 30 0 205 195 0 24 chr2 19190768 19190809 -234065774 + (CATA)n Simple_repeat Simple_repeat 1 40 0 180 111 0 0 chr2 19192141 19192168 -234064415 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 379 24 0 0 chr2 19192586 19192628 -234063955 - THE1B LTR MaLR 0 364 323 3051 50 3 8 chr2 19192679 19193039 -234063544 - L1PA7 LINE L1 -2 6152 5795 2441 91 9 26 chr2 19193185 19193526 -234063057 - THE1B LTR MaLR -29 335 1 225 299 39 13 chr2 19193610 19193687 -234062896 + Charlie4 DNA MER1_type 1883 1961 0 279 219 84 67 chr2 19193733 19193852 -234062731 - MIR SINE MIR -130 132 12 692 256 12 12 chr2 19193982 19194150 -234062433 + MER5B DNA MER1_type 8 175 -3 206 298 18 0 chr2 19194179 19194236 -234062347 + MIR SINE MIR 24 81 -127 257 235 20 0 chr2 19194494 19194545 -234062038 + L2 LINE L2 3221 3272 0 288 299 130 13 chr2 19195730 19195884 -234060699 - MIR SINE MIR -4 258 87 309 206 58 90 chr2 19196878 19197033 -234059550 - L1M4 LINE L1 -3864 2282 2133 23 68 0 0 chr2 19197693 19197737 -234058846 + AT_rich Low_complexity Low_complexity 1 44 0 381 329 49 28 chr2 19197794 19197937 -234058646 + MER5A DNA MER1_type 43 188 -1 496 274 94 21 chr2 19198215 19198449 -234058134 + MIR SINE MIR 6 256 -6 366 271 172 0 chr2 19199345 19199467 -234057116 + MIR3 SINE MIR 4 146 -62 203 235 0 20 chr2 19199567 19199618 -234056965 + L2 LINE L2 3264 3313 0 370 303 46 13 chr2 19199653 19199805 -234056778 + L2 LINE L2 3116 3272 0 335 172 82 41 chr2 19200096 19200218 -234056365 - L1ME4a LINE L1 -2 6119 5993 * 416 234 121 8 chr2 19200209 19200333 -234056250 - HAL1b LINE L1 -231 1117 980 277 277 209 34 chr2 19200768 19200916 -234055667 - MIR SINE MIR -25 237 64 487 286 50 19 chr2 19200973 19201134 -234055449 - MIR3 SINE MIR -23 185 20 184 277 21 0 chr2 19202711 19202758 -234053825 - L3 LINE CR1 -12 1565 1518 1215 241 93 59 chr2 19202762 19203289 -234053294 - MLT1H LTR MaLR -4 545 1 377 306 62 0 chr2 19204495 19204639 -234051944 - MIR3 SINE MIR -2 206 54 207 239 60 60 chr2 19207425 19207492 -234049091 - L2 LINE L2 -216 3056 2425 253 328 77 31 chr2 19208332 19208527 -234048056 + L2 LINE L2 2553 2756 -558 300 308 38 32 chr2 19208795 19208980 -234047603 + MLT1J2 LTR MaLR 265 450 0 564 236 40 80 chr2 19209551 19209801 -234046782 + MIR SINE MIR 4 243 -19 6598 104 125 54 chr2 19209804 19210998 -234045585 - MER52C LTR ERV1 0 1278 1 295 274 59 0 chr2 19211359 19211461 -234045122 - MIR3 SINE MIR -8 200 93 814 288 49 10 chr2 19211500 19211907 -234044676 + L1ME4a LINE L1 5518 5940 -181 1980 141 35 0 chr2 19212017 19212301 -234044282 - AluSx SINE Alu -18 294 1 590 271 66 11 chr2 19212529 19212710 -234043873 + MIR SINE MIR 20 210 -52 978 194 188 53 chr2 19212711 19212991 -234043592 - MSTC LTR MaLR 0 428 83 2775 96 3 5 chr2 19212991 19213367 -234043216 + THE1C LTR MaLR 1 375 0 978 194 188 53 chr2 19213367 19213463 -234043120 - MSTC LTR MaLR -345 83 1 201 226 0 0 chr2 19214047 19214100 -234042483 + (TA)n Simple_repeat Simple_repeat 2 54 0 285 217 15 13 chr2 19214256 19214330 -234042253 - MER5A DNA MER1_type -44 145 61 384 353 30 8 chr2 19214861 19214994 -234041589 - MIR SINE MIR -125 137 2 30 27 0 0 chr2 19217195 19217232 -234039351 + AT_rich Low_complexity Low_complexity 1 37 0 305 250 0 0 chr2 19218565 19218633 -234037950 + MIR SINE MIR 80 147 -115 251 313 94 23 chr2 19218923 19219051 -234037532 + L2 LINE L2 3136 3272 0 792 306 16 4 chr2 19219231 19219484 -234037099 - MIR SINE MIR -4 258 5 256 358 11 11 chr2 19220371 19220466 -234036117 - MIR SINE MIR -76 132 38 1288 197 10 33 chr2 19220646 19220945 -234035638 - L1MB7 LINE L1 -16 6168 5877 1196 136 90 3 chr2 19220950 19221251 -234035332 - L1PBa LINE L1 -4241 2622 2296 321 65 0 0 chr2 19221418 19221464 -234035119 - L1MB7 LINE L1 -262 5922 5877 * 10179 108 119 18 chr2 19221454 19223280 -234033303 - L1PBa LINE L1 -4219 2644 634 1157 138 10 0 chr2 19223280 19223476 -234033107 - L1PBa LINE L1 -6663 200 3 4693 245 55 26 chr2 19223489 19225945 -234030638 - L1M4 LINE L1 -2143 4239 1619 559 249 30 6 chr2 19225924 19226089 -234030494 - L1MB8 LINE L1 -6 6408 6240 * 1334 261 53 69 chr2 19226268 19226873 -234029710 + MLT1G LTR MaLR 1 590 0 807 203 31 6 chr2 19226875 19227038 -234029545 + MIR SINE MIR 87 253 -9 277 197 15 61 chr2 19228195 19228261 -234028322 + L2 LINE L2 3210 3272 0 293 363 73 50 chr2 19228779 19229307 -234027276 - L2 LINE L2 0 3272 2736 260 312 0 0 chr2 19230819 19230896 -234025687 + MIR SINE MIR 79 155 -107 189 154 0 0 chr2 19231593 19231632 -234024951 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr2 19232620 19232642 -234023941 + AT_rich Low_complexity Low_complexity 1 22 0 807 164 6 38 chr2 19232960 19233143 -234023440 - L1MA9 LINE L1 0 6312 6136 928 180 60 0 chr2 19233144 19233361 -234023222 - L1MA9 LINE L1 -484 5828 5599 180 0 0 0 chr2 19234680 19234700 -234021883 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 183 42 0 0 chr2 19234752 19234776 -234021807 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1034 330 102 45 chr2 19234782 19235802 -234020781 - L2 LINE L2 -13 3259 2175 375 149 0 0 chr2 19235945 19236019 -234020564 + (TG)n Simple_repeat Simple_repeat 2 75 0 285 314 57 9 chr2 19237428 19237533 -234019050 - L2 LINE L2 -25 3247 3138 4967 123 44 4 chr2 19237666 19239280 -234017303 - L1PA16 LINE L1 -2 6164 4531 450 324 80 27 chr2 19239394 19239619 -234016964 + L3 LINE CR1 1297 1533 -44 466 345 100 43 chr2 19241245 19242037 -234014546 - L2 LINE L2 -468 2846 2010 387 288 207 18 chr2 19242067 19242644 -234013939 + L2 LINE L2 2475 3142 -171 306 250 48 12 chr2 19242655 19242739 -234013844 - MIR SINE MIR -21 241 155 277 220 195 0 chr2 19242740 19242858 -234013725 - MLT2E LTR ERVL 0 628 488 366 289 35 28 chr2 19242951 19243093 -234013490 - MLT2E LTR ERVL -456 172 30 474 300 27 7 chr2 19243140 19243290 -234013293 - MIR SINE MIR -105 157 5 219 320 0 0 chr2 19243335 19243385 -234013198 + L2 LINE L2 3203 3252 -20 1021 158 0 6 chr2 19243517 19243700 -234012883 + L1PB1 LINE L1 3 184 -6679 * 13826 187 20 11 chr2 19243686 19245205 -234011378 + L1PB1 LINE L1 1894 3398 -3469 2163 139 3 0 chr2 19245205 19245515 -234011068 + AluSq SINE Alu 1 311 -2 13826 187 20 11 chr2 19245515 19248874 -234007709 + L1PB1 LINE L1 3398 6867 0 1114 262 37 13 chr2 19249343 19249824 -234006759 - L1ME3 LINE L1 -106 6056 5476 595 213 33 81 chr2 19250027 19250238 -234006345 - L1ME2 LINE L1 -8 6156 5956 189 296 19 0 chr2 19250847 19250901 -234005682 + MIR SINE MIR 85 139 -69 189 296 19 0 chr2 19252211 19252265 -234004318 + MIR SINE MIR 85 139 -69 590 314 120 20 chr2 19253154 19253511 -234003072 - HAL1 LINE L1 -1317 1190 798 1059 188 95 67 chr2 19254059 19254405 -234002178 + MER97b DNA MER1_type? 4 359 -694 * 1697 207 56 11 chr2 19254403 19254848 -234001735 + MER97a DNA MER1_type? 260 724 -170 342 181 96 0 chr2 19254902 19254985 -234001598 + MER97c DNA MER1_type? 1000 1090 0 369 326 86 21 chr2 19255516 19255795 -234000788 - MARNA DNA Mariner -213 373 77 186 43 0 0 chr2 19257052 19257075 -233999508 + (T)n Simple_repeat Simple_repeat 1 23 0 2613 107 28 26 chr2 19257075 19257497 -233999086 + MSTA LTR MaLR 6 428 0 22 35 0 0 chr2 19258049 19258078 -233998505 + AT_rich Low_complexity Low_complexity 1 29 0 221 98 24 0 chr2 19258322 19258363 -233998220 + (AATAG)n Simple_repeat Simple_repeat 1 42 0 470 197 66 53 chr2 19258365 19258517 -233998066 + L1MCc LINE L1 19 172 -6251 * 713 216 157 37 chr2 19258516 19258867 -233997716 + L1MCc LINE L1 1143 1535 -4888 403 288 33 41 chr2 19258887 19259158 -233997425 + L1MCc LINE L1 1812 2080 -5042 1072 232 32 0 chr2 19259185 19259469 -233997114 + L1MCc LINE L1 3281 3573 -3368 2404 145 44 0 chr2 19259469 19259877 -233996706 - MSTA LTR MaLR 0 428 3 531 194 102 0 chr2 19259949 19260047 -233996536 + FLAM_A SINE Alu 1 108 -34 23 68 0 0 chr2 19260682 19260726 -233995857 + AT_rich Low_complexity Low_complexity 1 44 0 3883 253 154 25 chr2 19261552 19263407 -233993176 + L1ME1 LINE L1 40 2132 -4264 596 205 31 0 chr2 19263405 19263566 -233993017 + L1ME1 LINE L1 5778 5943 -292 * 328 267 67 44 chr2 19263744 19263879 -233992704 + MIR3 SINE MIR 50 187 -21 180 254 0 51 chr2 19264190 19264249 -233992334 + MIR3 SINE MIR 12 67 -141 209 352 34 0 chr2 19264254 19264342 -233992241 + MIR SINE MIR 117 207 -55 201 293 19 66 chr2 19265118 19265224 -233991359 - L2 LINE L2 -215 3057 2957 295 318 36 24 chr2 19265276 19265443 -233991140 - MIR SINE MIR -62 200 30 1843 111 22 15 chr2 19266008 19266278 -233990305 - AluSg SINE Alu -23 287 16 338 310 35 9 chr2 19266312 19266428 -233990155 + MIR3 SINE MIR 83 201 -7 522 254 119 15 chr2 19266463 19266664 -233989919 + MIR SINE MIR 41 262 0 572 281 60 16 chr2 19266699 19266948 -233989635 - MIR SINE MIR 0 262 3 463 306 99 60 chr2 19267473 19267855 -233988728 + L2 LINE L2 2828 3224 -48 219 261 116 93 chr2 19268100 19268368 -233988215 - L2 LINE L2 0 3272 2999 200 246 35 0 chr2 19269592 19269649 -233986934 + CT-rich Low_complexity Low_complexity 2 60 0 310 288 140 54 chr2 19271001 19271223 -233985360 - L2 LINE L2 -208 3064 2824 180 0 0 0 chr2 19271544 19271564 -233985019 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 234 167 0 0 chr2 19273137 19273173 -233983410 - MIR SINE MIR -8 254 219 206 365 26 17 chr2 19273335 19273450 -233983133 - MIR SINE MIR -124 138 23 222 37 0 0 chr2 19273725 19273752 -233982831 + (GAAA)n Simple_repeat Simple_repeat 1 27 0 363 161 0 0 chr2 19274917 19274979 -233981604 - MER3 DNA MER1_type -136 73 12 344 175 0 0 chr2 19275171 19275228 -233981355 + AluS SINE Alu 1 57 -245 402 194 0 0 chr2 19275317 19275384 -233981199 + AluJ/FRAM SINE Alu 219 285 -27 25 51 0 0 chr2 19275413 19275452 -233981131 + AT_rich Low_complexity Low_complexity 1 39 0 351 243 62 97 chr2 19275464 19275608 -233980975 - MIR SINE MIR -61 201 63 5066 177 26 5 chr2 19276808 19278008 -233978575 + L1MA9 LINE L1 4255 5474 -694 200 117 50 17 chr2 19278043 19278103 -233978480 + (TA)n Simple_repeat Simple_repeat 1 62 0 383 207 23 17 chr2 19278130 19278304 -233978279 + (TA)n Simple_repeat Simple_repeat 1 175 0 286 258 0 0 chr2 19278307 19278396 -233978187 + L1MC4 LINE L1 6615 6703 -1339 227 267 0 22 chr2 19278394 19278484 -233978099 - L1MC4 LINE L1 -1339 6703 6616 * 570 138 24 42 chr2 19278510 19278778 -233977805 + (TA)n Simple_repeat Simple_repeat 1 263 0 1447 171 33 0 chr2 19278791 19279065 -233977518 + L1MA9 LINE L1 5492 5774 -538 344 39 0 20 chr2 19279078 19279129 -233977454 + (TA)n Simple_repeat Simple_repeat 2 51 0 1399 147 43 0 chr2 19279199 19279216 -233977367 + L1MA9 LINE L1 5776 5791 -521 270 0 0 0 chr2 19279216 19279246 -233977337 + (CA)n Simple_repeat Simple_repeat 1 30 0 1399 147 43 0 chr2 19279246 19279486 -233977097 + L1MA9 LINE L1 5791 6044 -268 814 175 83 70 chr2 19279587 19279901 -233976682 + L1MA10 LINE L1 6017 6334 0 2243 106 3 7 chr2 19281815 19282118 -233974465 - AluSx SINE Alu -10 302 1 262 287 126 0 chr2 19282443 19282530 -233974053 + MIR SINE MIR 57 154 -108 2653 129 21 21 chr2 19282918 19283343 -233973240 + MSTC LTR MaLR 4 428 0 395 281 118 0 chr2 19283445 19283580 -233973003 - L2 LINE L2 0 3313 3163 2463 114 7 42 chr2 19285827 19286231 -233970352 - MLT1B LTR MaLR 0 390 1 739 236 19 0 chr2 19286546 19286703 -233969880 - MER58A DNA MER1_type -25 199 40 229 329 40 13 chr2 19286707 19286783 -233969800 - MIR3 SINE MIR -125 83 6 232 302 0 0 chr2 19286890 19286943 -233969640 - MER58A DNA MER1_type -171 53 1 497 288 177 32 chr2 19287534 19287941 -233968642 - L2 LINE L2 -13 3300 2835 261 300 117 17 chr2 19290838 19290958 -233965625 - MER5A DNA MER1_type -49 140 9 424 319 104 22 chr2 19291185 19291367 -233965216 + L3 LINE CR1 1007 1203 -374 1048 279 71 57 chr2 19291449 19292115 -233964468 + HAL1 LINE L1 110 784 -1723 744 260 150 26 chr2 19292158 19292617 -233963966 + MLT1G1 LTR MaLR 72 587 -3 1270 0 0 0 chr2 19292790 19292928 -233963655 + AluYa5/8 SINE Alu 166 303 -8 275 332 66 43 chr2 19294427 19294728 -233961855 - L2 LINE L2 -453 2861 2554 1834 166 5 60 chr2 19295666 19296063 -233960520 + MLT1B LTR MaLR 1 375 -15 467 226 23 45 chr2 19296866 19297043 -233959540 - MER104 DNA Tc2 0 180 8 1793 54 35 139 chr2 19297090 19297406 -233959177 + AluY SINE Alu 29 311 0 288 336 65 0 chr2 19298020 19298127 -233958456 + MIR SINE MIR 77 190 -72 389 289 9 0 chr2 19298221 19298335 -233958248 + LTR33 LTR ERVL 103 217 -304 1807 92 17 4 chr2 19298381 19298620 -233957963 - AluSp SINE Alu -71 242 1 348 254 35 0 chr2 19298628 19298742 -233957841 + LTR33 LTR ERVL 399 516 -5 237 33 0 0 chr2 19300122 19300152 -233956431 + (TG)n Simple_repeat Simple_repeat 1 30 0 302 320 103 21 chr2 19300252 19300349 -233956234 + MIR SINE MIR 28 132 -130 1847 142 3 36 chr2 19300350 19300680 -233955903 - MER1B DNA MER1_type 0 339 21 1983 140 71 10 chr2 19300686 19301079 -233955504 - MER31A LTR ERV1 -6 479 63 1829 168 0 3 chr2 19301176 19301461 -233955122 - AluJb SINE Alu -24 288 5 246 295 45 18 chr2 19302345 19302457 -233954126 - MIR3 SINE MIR -25 183 69 22 0 0 0 chr2 19303076 19303098 -233953485 + AT_rich Low_complexity Low_complexity 1 22 0 1849 115 80 3 chr2 19303819 19304107 -233952476 + AluSx SINE Alu 1 310 -2 230 248 96 41 chr2 19305251 19305469 -233951114 + L1MEd LINE L1 874 1103 -5102 331 183 0 0 chr2 19305571 19305631 -233950952 - MER20 DNA MER1_type 0 219 160 822 271 107 60 chr2 19305770 19306256 -233950327 + L1MEd LINE L1 1403 1865 -4531 3046 195 11 7 chr2 19306256 19306816 -233949767 + MER68 LTR ERV1 1 562 0 822 271 107 60 chr2 19306816 19307179 -233949404 + L1MEd LINE L1 1865 2304 -4092 1607 201 0 17 chr2 19307179 19307472 -233949111 + AluJo SINE Alu 17 304 -8 822 271 107 60 chr2 19307472 19307573 -233949010 + L1MEd LINE L1 2304 2399 -3997 328 289 82 0 chr2 19307686 19307880 -233948703 + L1MEd LINE L1 2369 2578 -3637 1704 66 0 0 chr2 19307881 19308107 -233948476 - L1PA8 LINE L1 -35 6137 5912 229 253 51 51 chr2 19308995 19309074 -233947509 - L2 LINE L2 0 3313 3235 1164 165 25 38 chr2 19309691 19310036 -233946547 + MER33 DNA MER1_type 6 324 0 333 0 0 0 chr2 19310162 19310199 -233946384 + (CA)n Simple_repeat Simple_repeat 1 37 0 524 200 164 18 chr2 19311030 19311195 -233945388 + MER5A DNA MER1_type 1 189 0 369 331 51 0 chr2 19314790 19314947 -233941636 - MIR3 SINE MIR -43 165 1 2051 123 53 39 chr2 19315202 19315561 -233941022 - THE1B LTR MaLR 0 364 1 271 149 0 184 chr2 19315986 19316073 -233940510 + MLT1F1 LTR MaLR 49 119 -448 1418 237 169 4 chr2 19316073 19316588 -233939995 + L1MD3 LINE L1 7396 7995 0 274 311 66 42 chr2 19316792 19316959 -233939624 + L2 LINE L2 2100 2270 -1044 1109 218 146 11 chr2 19316975 19317324 -233939259 + MSTD LTR MaLR 1 396 0 279 307 93 80 chr2 19317324 19318060 -233938523 + L2 LINE L2 2295 3037 -235 250 258 16 0 chr2 19318060 19318122 -233938461 - MIR SINE MIR -131 131 69 292 289 158 26 chr2 19319564 19319678 -233936905 - L2 LINE L2 -10 3262 3134 2173 106 116 64 chr2 19320031 19320438 -233936145 + MSTA LTR MaLR 1 428 0 344 271 83 42 chr2 19321274 19321418 -233935165 + MIR3 SINE MIR 1 150 -58 209 302 48 0 chr2 19321462 19321525 -233935058 - MIR SINE MIR -83 125 60 594 279 153 13 chr2 19322332 19322561 -233934022 - MIR SINE MIR 0 262 2 3586 273 70 60 chr2 19322575 19324974 -233931609 - HAL1 LINE L1 -37 2470 47 3804 159 29 45 chr2 19326627 19327104 -233929479 + L1MC3 LINE L1 6908 7391 -394 2280 181 24 2 chr2 19327104 19327523 -233929060 - MSTA LTR MaLR 0 428 1 3804 159 29 45 chr2 19327523 19327912 -233928671 + L1MC3 LINE L1 7391 7785 0 284 173 25 25 chr2 19328136 19328217 -233928366 + (TA)n Simple_repeat Simple_repeat 2 82 0 189 107 0 0 chr2 19329007 19329035 -233927548 + (TTA)n Simple_repeat Simple_repeat 3 30 0 1065 201 5 27 chr2 19329196 19329364 -233927219 - MLT1D LTR MaLR 0 505 342 2205 133 19 30 chr2 19329364 19329732 -233926851 - THE1B LTR MaLR 0 364 1 1065 201 5 27 chr2 19329732 19329787 -233926796 - MLT1D LTR MaLR -163 342 287 311 281 94 0 chr2 19330159 19330255 -233926328 - MIR SINE MIR -102 160 56 192 242 0 91 chr2 19330824 19330890 -233925693 + L2 LINE L2 3210 3269 -3 573 274 11 40 chr2 19331473 19331648 -233924935 + MER5B DNA MER1_type 1 170 -8 852 187 22 0 chr2 19332199 19332338 -233924245 - MER5A DNA MER1_type -47 142 1 2137 92 0 25 chr2 19332454 19332736 -233923847 - AluSx SINE Alu -1 311 37 2017 118 45 0 chr2 19333967 19334254 -233922329 + AluSx SINE Alu 1 300 -12 25 51 0 0 chr2 19334520 19334559 -233922024 + AT_rich Low_complexity Low_complexity 1 39 0 814 279 60 9 chr2 19336731 19337216 -233919367 + L1MDb LINE L1 1117 1663 -4924 479 293 22 87 chr2 19337217 19337491 -233919092 + L1MDb LINE L1 1625 2008 -4528 22 35 0 0 chr2 19337609 19337638 -233918945 + AT_rich Low_complexity Low_complexity 1 29 0 926 169 0 0 chr2 19337984 19338126 -233918457 + AluSg/x SINE Alu 137 278 -34 225 0 0 0 chr2 19338128 19338153 -233918430 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 941 269 18 66 chr2 19338153 19338710 -233917873 + L1MDb LINE L1 2553 3082 -3324 643 183 70 0 chr2 19338712 19338827 -233917756 + FLAM_C SINE Alu 3 125 -18 1051 276 66 22 chr2 19338839 19339488 -233917095 + L1MDb LINE L1 3070 3747 -2659 1907 258 81 30 chr2 19339907 19340866 -233915717 + L1MDb LINE L1 3916 4923 -1483 919 142 74 16 chr2 19340884 19341074 -233915509 - L1MC3 LINE L1 0 7785 7585 428 266 19 44 chr2 19341088 19341246 -233915337 + L1MDb LINE L1 4965 5118 -1288 317 250 83 45 chr2 19341489 19341621 -233914962 - L1MEd LINE L1 -1333 1157 967 325 350 41 36 chr2 19342060 19342423 -233914160 + L1MEc LINE L1 34 398 -5998 1568 208 34 12 chr2 19342423 19342775 -233913808 - MLT1A1 LTR MaLR 0 365 4 299 250 0 37 chr2 19342871 19342979 -233913604 + L1MEc LINE L1 462 565 -5831 233 302 146 19 chr2 19343368 19343573 -233913010 + MIR SINE MIR 32 262 0 207 208 38 19 chr2 19343600 19343653 -233912930 + L2 LINE L2 3205 3258 -14 233 330 21 0 chr2 19343702 19343796 -233912787 + MIR SINE MIR 37 132 -76 29 0 0 0 chr2 19344828 19344857 -233911726 + AT_rich Low_complexity Low_complexity 1 29 0 675 111 52 31 chr2 19344961 19345273 -233911310 + GA-rich Low_complexity Low_complexity 1 318 0 304 302 54 59 chr2 19346100 19346322 -233910261 + L1M4 LINE L1 3417 3637 -2509 442 295 38 21 chr2 19346323 19346611 -233909972 + L1M4 LINE L1 3663 3955 -2191 251 283 105 55 chr2 19346845 19347133 -233909450 - L1ME LINE L1 -1527 4553 4281 1474 206 25 55 chr2 19347133 19347497 -233909086 - MLT1B LTR MaLR -4 386 33 231 36 0 0 chr2 19347497 19347525 -233909058 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1474 206 25 55 chr2 19347525 19347558 -233909025 - MLT1B LTR MaLR -357 33 1 251 283 105 55 chr2 19347558 19347795 -233908788 - L1ME LINE L1 -1799 4281 4002 2680 33 0 0 chr2 19347954 19348255 -233908328 + AluY SINE Alu 1 301 -10 255 231 5 0 chr2 19349542 19349617 -233906966 - L1ME LINE L1 -2193 3887 3811 1215 308 71 41 chr2 19349620 19349866 -233906717 - L1ME LINE L1 -2794 3286 3049 7539 34 0 0 chr2 19349866 19351106 -233905477 - L1PA4 LINE L1 -1 6154 4915 1215 308 71 41 chr2 19351106 19351646 -233904937 - L1ME LINE L1 -3031 3049 2476 359 245 39 0 chr2 19351668 19351770 -233904813 - L1ME LINE L1 -4840 1240 1135 1121 202 40 46 chr2 19351774 19352197 -233904386 - L1ME LINE L1 -5026 1004 631 22 0 0 0 chr2 19353034 19353056 -233903527 + AT_rich Low_complexity Low_complexity 1 22 0 295 199 99 153 chr2 19353123 19353254 -233903329 + MIR SINE MIR 7 130 -132 269 269 15 0 chr2 19353255 19353322 -233903261 + CT-rich Low_complexity Low_complexity 3 70 0 266 306 30 97 chr2 19353674 19353721 -233902862 + L2 LINE L2 3134 3183 -89 1921 159 3 13 chr2 19353721 19354029 -233902554 + AluJo SINE Alu 1 305 -7 266 306 30 97 chr2 19354029 19354115 -233902468 + L2 LINE L2 3183 3258 -14 180 309 49 81 chr2 19354121 19354244 -233902339 + MIR SINE MIR 110 228 -34 1978 118 48 3 chr2 19354438 19354727 -233901856 - AluSg SINE Alu -8 302 1 2475 78 3 0 chr2 19355049 19355358 -233901225 + AluY SINE Alu 1 310 -1 1209 189 9 30 chr2 19356692 19356925 -233899658 - AluJo SINE Alu -3 309 82 32 0 0 0 chr2 19359566 19359598 -233896985 + AT_rich Low_complexity Low_complexity 1 32 0 457 323 31 31 chr2 19359691 19359886 -233896697 - MIR SINE MIR -66 196 2 1922 201 31 72 chr2 19359967 19360454 -233896129 + MLT1D LTR MaLR 3 469 -36 299 302 52 48 chr2 19360895 19361358 -233895225 + L1MC/D LINE L1 4390 4854 -1292 345 301 26 21 chr2 19361448 19361641 -233894942 + L1MC/D LINE L1 4860 5053 -1093 21 36 0 0 chr2 19361752 19361780 -233894803 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr2 19361907 19361927 -233894656 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 32 43 0 0 chr2 19363068 19363114 -233893469 + AT_rich Low_complexity Low_complexity 1 46 0 401 284 67 120 chr2 19363435 19363943 -233892640 + LTR67 LTR ERVL 36 516 -41 741 155 20 147 chr2 19364156 19364408 -233892175 + L1MB8 LINE L1 5901 6120 -58 5035 94 12 1 chr2 19364423 19365115 -233891468 - L1PA13 LINE L1 -23 6140 5442 719 130 110 19 chr2 19365132 19365286 -233891297 + MER53 DNA DNA 22 189 0 591 241 21 7 chr2 19365742 19365883 -233890700 - MLT1G1 LTR MaLR -447 148 6 311 243 91 62 chr2 19366539 19366815 -233889768 + L1 LINE L1 4042 4325 -1821 21 0 0 0 chr2 19367479 19367500 -233889083 + AT_rich Low_complexity Low_complexity 1 21 0 1273 245 21 34 chr2 19367797 19368205 -233888378 + L1MC/D LINE L1 5265 5642 -2166 227 101 29 58 chr2 19369621 19369690 -233886893 + (TA)n Simple_repeat Simple_repeat 2 68 0 2326 111 0 0 chr2 19370072 19370379 -233886204 + AluSg SINE Alu 1 307 -3 21 36 0 0 chr2 19370613 19370641 -233885942 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr2 19370690 19370716 -233885867 + (TATAA)n Simple_repeat Simple_repeat 3 28 0 211 140 40 0 chr2 19370796 19370846 -233885737 + (ATATG)n Simple_repeat Simple_repeat 3 54 0 43953 50 2 0 chr2 19371383 19377515 -233879068 + L1PA4 LINE L1 11 6154 -1 989 258 53 78 chr2 19377659 19378093 -233878490 + MLT2C2 LTR ERVL 1 423 -41 7340 134 54 17 chr2 19378094 19379299 -233877284 + HSMAR2 DNA Mariner 46 1295 -7 237 132 0 0 chr2 19379299 19379337 -233877246 + (CA)n Simple_repeat Simple_repeat 2 39 0 300 130 0 0 chr2 19379337 19379383 -233877200 + MLT2C2 LTR ERVL 465 510 -10 908 244 71 19 chr2 19380004 19380511 -233876072 + L1ME LINE L1 5003 5533 -631 1336 282 157 27 chr2 19380534 19381119 -233875464 + MLT2F LTR ERVL 1 661 -2 882 179 21 137 chr2 19381153 19381387 -233875196 + Zaphod DNA AcHobo 331 537 -3494 318 301 0 0 chr2 19382015 19382108 -233874475 + MIR3 SINE MIR 113 205 -3 343 294 94 12 chr2 19383110 19383280 -233873303 + MIR3 SINE MIR 15 198 -10 1845 231 90 27 chr2 19385267 19385756 -233870827 + MLT2B1 LTR ERVL 1 520 0 1361 167 40 117 chr2 19386241 19386636 -233869947 + MLT1A1 LTR MaLR 1 365 0 9026 206 10 26 chr2 19386636 19388395 -233868188 + MLT1A1-int LTR MaLR 1 1730 -5 276 77 0 26 chr2 19388401 19388440 -233868143 + MLT1A1 LTR MaLR 1 38 -327 212 128 0 43 chr2 19388441 19388488 -233868095 + (GGAGAA)n Simple_repeat Simple_repeat 6 50 0 487 280 121 78 chr2 19389469 19389815 -233866768 - L2 LINE L2 -10 3262 2902 632 241 54 49 chr2 19390762 19391138 -233865445 - LTR50 LTR ERVL 0 601 326 544 263 58 0 chr2 19391200 19391337 -233865246 - LTR50 LTR ERVL -650 145 1 326 297 35 43 chr2 19391484 19391682 -233864901 - MIR SINE MIR -44 218 19 256 257 99 20 chr2 19393086 19393187 -233863396 + MIR3 SINE MIR 93 201 -7 350 238 50 0 chr2 19394173 19394253 -233862330 - MER5A DNA MER1_type -92 97 14 357 321 48 30 chr2 19394273 19394438 -233862145 + MIR SINE MIR 18 185 -77 481 294 12 29 chr2 19395770 19395940 -233860643 + MER5A DNA MER1_type 2 168 -21 207 0 0 0 chr2 19398026 19398049 -233858534 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 225 94 0 0 chr2 19398856 19398888 -233857695 + (TG)n Simple_repeat Simple_repeat 2 33 0 229 200 0 75 chr2 19402743 19402823 -233853760 + G-rich Low_complexity Low_complexity 3 76 0 315 0 0 0 chr2 19407062 19407097 -233849486 + (TG)n Simple_repeat Simple_repeat 1 35 0 542 161 127 0 chr2 19408636 19408754 -233847829 + MER3 DNA MER1_type 77 209 0 203 158 0 26 chr2 19409653 19409691 -233846892 + C-rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr2 19409957 19409985 -233846598 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 19413155 19413177 -233843406 + (CCCCG)n Simple_repeat Simple_repeat 5 26 0 195 238 86 38 chr2 19414063 19414168 -233842415 + MIR SINE MIR 91 200 -62 1630 181 3 14 chr2 19414717 19415004 -233841579 - AluJb SINE Alu -28 284 1 3266 21 0 0 chr2 19415929 19416305 -233840278 + L1P LINE L1 4900 5275 -871 211 177 32 0 chr2 19416410 19416472 -233840111 + (TA)n Simple_repeat Simple_repeat 2 65 0 21 0 0 0 chr2 19416687 19416708 -233839875 + AT_rich Low_complexity Low_complexity 1 21 0 441 174 54 0 chr2 19417235 19417327 -233839256 - L1MDa LINE L1 -4865 1675 1579 530 289 134 16 chr2 19417415 19417803 -233838780 - L1MC4 LINE L1 -9 8033 7600 834 162 281 21 chr2 19417809 19418044 -233838539 - L1MD2 LINE L1 -3 6356 6061 6113 181 107 47 chr2 19418054 19418628 -233837955 - L1MDa LINE L1 -4244 2296 1758 2111 118 7 0 chr2 19418628 19418916 -233837667 - AluSq SINE Alu -23 290 1 6113 181 107 47 chr2 19418916 19419956 -233836627 - L1MDa LINE L1 -4782 1758 586 273 312 56 11 chr2 19420816 19420951 -233835632 + MIR SINE MIR 28 164 -63 399 298 40 22 chr2 19422525 19422734 -233833849 - MIR SINE MIR -4 258 2 471 303 90 28 chr2 19424851 19425070 -233831513 - L1ME4a LINE L1 0 6121 5917 2051 117 0 3 chr2 19425070 19425380 -233831203 + AluSx SINE Alu 1 309 0 471 303 90 28 chr2 19425380 19425476 -233831107 - L1ME4a LINE L1 -204 5917 5828 2228 203 85 45 chr2 19425476 19426076 -233830507 - MLT1E3 LTR MaLR 0 624 1 471 303 90 28 chr2 19426076 19426145 -233830438 - L1ME4a LINE L1 -293 5828 5709 285 211 90 60 chr2 19426151 19426285 -233830298 - L1P5 LINE L1 -702 5449 5312 510 243 126 0 chr2 19426340 19426451 -233830132 - FLAM_C SINE Alu -17 126 2 398 304 97 34 chr2 19426807 19427156 -233829427 - L1ME4a LINE L1 -1320 4826 4456 1490 238 65 12 chr2 19427205 19427301 -233829282 - L1MC4 LINE L1 -137 7905 7816 2231 123 0 7 chr2 19427301 19427611 -233828972 + AluSx SINE Alu 2 309 -3 1490 238 65 12 chr2 19427611 19427913 -233828670 - L1MC4 LINE L1 -226 7816 7486 702 286 43 18 chr2 19427966 19428221 -233828362 - MIR SINE MIR -1 261 2 194 263 26 40 chr2 19428307 19428383 -233828200 + MIR SINE MIR 59 133 -129 * 322 243 144 36 chr2 19428372 19428483 -233828100 - L2 LINE L2 0 3313 3191 278 304 74 0 chr2 19428487 19428622 -233827961 + MIR SINE MIR 117 261 -1 249 33 0 0 chr2 19430132 19430162 -233826421 + (TG)n Simple_repeat Simple_repeat 1 30 0 224 77 26 0 chr2 19430165 19430204 -233826379 + (TA)n Simple_repeat Simple_repeat 2 41 0 399 73 0 0 chr2 19431275 19431330 -233825253 + (TG)n Simple_repeat Simple_repeat 2 56 0 29 70 0 0 chr2 19431544 19431601 -233824982 + AT_rich Low_complexity Low_complexity 1 57 0 244 277 92 59 chr2 19431601 19431720 -233824863 + MIR SINE MIR 140 262 0 280 254 17 0 chr2 19432699 19432758 -233823825 - L2 LINE L2 0 3272 3213 587 282 41 6 chr2 19432777 19432947 -233823636 + L2 LINE L2 2592 2767 -547 * 1005 301 82 10 chr2 19432941 19433323 -233823260 - L2 LINE L2 -724 2590 2178 543 56 37 19 chr2 19433323 19433430 -233823153 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 443 305 7 26 chr2 19433459 19433610 -233822973 - L2 LINE L2 -1405 1909 1762 226 252 61 69 chr2 19433867 19433998 -233822585 - MIR SINE MIR -1 261 132 23 0 0 0 chr2 19435075 19435098 -233821485 + AT_rich Low_complexity Low_complexity 1 23 0 236 300 29 0 chr2 19435407 19435477 -233821106 + CT-rich Low_complexity Low_complexity 1 72 0 35 0 0 0 chr2 19435477 19435512 -233821071 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr2 19435717 19435754 -233820829 + (TG)n Simple_repeat Simple_repeat 2 38 0 538 203 101 7 chr2 19435827 19435965 -233820618 + MIR SINE MIR 47 197 -65 201 175 0 0 chr2 19437223 19437263 -233819320 + CT-rich Low_complexity Low_complexity 2 41 0 230 293 34 57 chr2 19437329 19437487 -233819096 - MIR SINE MIR -34 174 23 * 319 340 10 10 chr2 19437429 19437532 -233819051 + MIR SINE MIR 10 112 -150 2208 173 8 6 chr2 19437656 19438020 -233818563 + MLT1A1 LTR MaLR 1 365 0 385 260 117 53 chr2 19438020 19438362 -233818221 - L1ME LINE L1 -488 5674 5311 2246 101 3 3 chr2 19439840 19440148 -233816435 - AluY SINE Alu -3 308 1 207 0 0 0 chr2 19440762 19440785 -233815798 + (TTG)n Simple_repeat Simple_repeat 2 24 0 521 238 122 24 chr2 19440797 19440961 -233815622 - MER5A DNA MER1_type 0 189 10 36 40 0 0 chr2 19442685 19442735 -233813848 + AT_rich Low_complexity Low_complexity 1 50 0 624 295 82 82 chr2 19442813 19443952 -233812631 + L1M4 LINE L1 4243 5381 -765 * 1913 199 14 9 chr2 19443949 19444370 -233812213 + L1PB3 LINE L1 4753 5175 -971 1688 160 0 4 chr2 19444374 19444637 -233811946 + AluSx SINE Alu 13 274 -38 5023 147 38 2 chr2 19444638 19445446 -233811137 + L1PB3 LINE L1 5317 6153 -1 417 306 123 47 chr2 19445464 19445899 -233810684 + L1ME LINE L1 5267 5628 -536 663 92 0 0 chr2 19447410 19447497 -233809086 - L1P LINE L1 -6049 97 11 506 288 30 0 chr2 19448061 19448193 -233808390 - MIR SINE MIR -70 192 57 1007 158 16 22 chr2 19449047 19449231 -233807352 - AluJb SINE Alu -8 304 122 43429 34 23 1 chr2 19449624 19455647 -233800936 - L1PA2 LINE L1 -2 6153 2 195 204 0 0 chr2 19455732 19455776 -233800807 + CT-rich Low_complexity Low_complexity 2 45 0 363 265 81 0 chr2 19456474 19456610 -233799973 + MIR SINE MIR 101 247 -15 1409 110 0 55 chr2 19457093 19457312 -233799271 + AluSq SINE Alu 1 207 -106 348 64 0 0 chr2 19457339 19457386 -233799197 + (TG)n Simple_repeat Simple_repeat 2 48 0 395 250 189 14 chr2 19457580 19457728 -233798855 - MIR SINE MIR -19 243 70 625 250 45 17 chr2 19458405 19458581 -233798002 - MIR SINE MIR -76 186 6 1377 223 63 17 chr2 19458769 19459119 -233797464 + MLT1A2 LTR MaLR 1 593 0 190 293 85 49 chr2 19459141 19459223 -233797360 + L2 LINE L2 3186 3270 -43 305 294 40 89 chr2 19459883 19460186 -233796397 - L3 LINE CR1 -45 1532 1245 272 246 72 0 chr2 19460246 19460315 -233796268 + MER91B DNA MER1_type 3 76 -114 229 324 183 23 chr2 19460393 19460612 -233795971 - L3 LINE CR1 -342 1235 982 269 373 65 0 chr2 19460777 19460930 -233795653 + L2 LINE L2 3104 3266 -6 2524 56 0 37 chr2 19464524 19464846 -233791737 - AluY SINE Alu -1 310 1 425 330 54 27 chr2 19465156 19465377 -233791206 + MIR SINE MIR 20 246 -16 2369 88 7 10 chr2 19465399 19465707 -233790876 - AluSp SINE Alu -6 307 1 186 43 0 0 chr2 19465821 19465844 -233790739 + (TG)n Simple_repeat Simple_repeat 2 24 0 221 292 72 26 chr2 19466537 19466698 -233789885 + MIR SINE MIR 20 188 -62 393 278 25 56 chr2 19466816 19466978 -233789605 - MIR3 SINE MIR -17 191 35 1950 270 96 18 chr2 19467593 19468838 -233787745 - L1MEc LINE L1 -1730 4485 3143 267 284 128 35 chr2 19468834 19468975 -233787608 - L1MEc LINE L1 -4719 1677 1524 * 685 353 19 6 chr2 19468986 19469346 -233787237 + HERVL LTR ERVL 3903 4267 -1387 482 279 60 60 chr2 19469563 19469832 -233786751 + LTR33 LTR ERVL 1 269 -252 276 291 47 0 chr2 19469914 19470000 -233786583 + LTR33 LTR ERVL 298 387 -134 373 238 0 49 chr2 19470194 19470316 -233786267 - MIR SINE MIR -28 234 119 783 256 74 9 chr2 19470417 19470647 -233785936 + MIR SINE MIR 7 251 -11 288 0 0 0 chr2 19472306 19472338 -233784245 + (TC)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr2 19472360 19472389 -233784194 + (GA)n Simple_repeat Simple_repeat 2 30 0 2131 113 3 36 chr2 19472433 19472742 -233783841 + AluSx SINE Alu 1 299 -13 180 311 123 0 chr2 19472789 19472895 -233783688 - L2 LINE L2 0 3313 3195 324 0 0 0 chr2 19475162 19475198 -233781385 + (TG)n Simple_repeat Simple_repeat 2 37 0 5297 118 0 14 chr2 19475684 19477453 -233779130 - L1PA13 LINE L1 0 6163 4398 411 292 7 21 chr2 19479071 19479231 -233777352 + MIR SINE MIR 24 141 -67 886 137 0 7 chr2 19479546 19479699 -233776884 - L1MB1 LINE L1 -291 5898 5747 1850 151 19 35 chr2 19479699 19480069 -233776514 + L1MA9 LINE L1 5947 6312 0 201 340 111 30 chr2 19480229 19480373 -233776210 + L2 LINE L2 3032 3204 -109 14697 127 8 0 chr2 19480373 19481427 -233775156 + L1PA8 LINE L1 2954 3998 -2174 2367 85 0 38 chr2 19481427 19481746 -233774837 + AluY SINE Alu 1 307 -4 14697 127 8 0 chr2 19481746 19483920 -233772663 + L1PA8 LINE L1 3998 6167 -5 201 340 111 30 chr2 19483920 19484010 -233772573 + L2 LINE L2 3204 3285 -28 1748 165 3 26 chr2 19484747 19485050 -233771533 - AluJo SINE Alu -16 296 1 411 312 124 24 chr2 19485192 19485522 -233771061 - LTR33 LTR ERVL -57 464 102 241 341 38 15 chr2 19486371 19486503 -233770080 - MIR3 SINE MIR -15 193 59 848 328 19 0 chr2 19486905 19487161 -233769422 - MIR SINE MIR 0 262 2 836 169 27 126 chr2 19487284 19487545 -233769038 + L1PA15 LINE L1 5931 6165 0 487 242 44 50 chr2 19487946 19488128 -233768455 + MIR3 SINE MIR 16 196 -12 272 292 31 54 chr2 19488751 19488881 -233767702 - MIR SINE MIR -64 144 18 1954 161 8 40 chr2 19488926 19489280 -233767303 - MER61A LTR ERV1 0 343 1 533 276 63 23 chr2 19489730 19489904 -233766679 + MIR SINE MIR 2 182 -80 758 63 0 0 chr2 19489953 19490048 -233766535 + AluSc SINE Alu 1 95 -214 1390 105 21 0 chr2 19490187 19490377 -233766206 + AluSg/x SINE Alu 99 292 -20 237 146 24 61 chr2 19491262 19491298 -233765285 + (CATA)n Simple_repeat Simple_repeat 1 37 -388 2561 65 0 31 chr2 19491298 19491620 -233764963 + AluSq SINE Alu 1 312 -1 237 146 24 61 chr2 19491620 19491704 -233764879 + (CATA)n Simple_repeat Simple_repeat 37 425 0 5087 164 17 25 chr2 19491770 19493320 -233763263 - L1MA4 LINE L1 0 6300 4766 559 298 85 29 chr2 19493493 19494009 -233762574 - L1MC/D LINE L1 -2002 5806 5262 379 280 9 9 chr2 19494173 19494280 -233762303 - MER5A DNA MER1_type -79 110 4 515 267 83 24 chr2 19495102 19495344 -233761239 + MLT1J1 LTR MaLR 1 250 -200 242 306 83 0 chr2 19497047 19497155 -233759428 - L2 LINE L2 0 3313 3197 600 313 28 0 chr2 19499517 19499696 -233756887 + MIR SINE MIR 78 261 -1 3619 151 39 0 chr2 19499727 19500363 -233756220 - L1MC1 LINE L1 -1 6332 5672 7369 30 4 0 chr2 19500979 19502207 -233754376 - L1PA4 LINE L1 -4 6151 4917 2224 45 0 0 chr2 19502209 19502498 -233754085 + L1PA4 LINE L1 4605 4893 -1253 217 318 0 71 chr2 19502949 19503075 -233753508 + MIR3 SINE MIR 63 179 -29 5634 119 6 4 chr2 19503149 19504064 -233752519 - L1PB2 LINE L1 -3 6148 5232 194 241 111 65 chr2 19504782 19504890 -233751693 - MIR SINE MIR -51 211 99 212 257 14 68 chr2 19505720 19505794 -233750789 - MIR SINE MIR -104 158 89 207 0 0 0 chr2 19506155 19506178 -233750405 + (T)n Simple_repeat Simple_repeat 1 23 0 231 237 26 26 chr2 19506395 19506471 -233750112 - L2 LINE L2 -4 3268 3193 182 310 0 0 chr2 19506593 19506651 -233749932 - L2 LINE L2 -555 2759 2702 5935 45 8 12 chr2 19506660 19507314 -233749269 - L1PA7 LINE L1 -16 6138 5486 2199 93 0 35 chr2 19507314 19507625 -233748958 - AluY SINE Alu -11 300 1 5935 45 8 12 chr2 19507625 19507747 -233748836 - L1PA7 LINE L1 -668 5486 5365 1045 101 30 0 chr2 19507738 19507907 -233748676 + L1PA7 LINE L1 5201 5374 -772 * 204 316 161 35 chr2 19508022 19508364 -233748219 - L2 LINE L2 -825 2489 2105 186 133 0 0 chr2 19509364 19509394 -233747189 + (ATGGTG)n Simple_repeat Simple_repeat 6 35 0 305 214 29 57 chr2 19511416 19511486 -233745097 + MLT1K LTR MaLR 179 246 -342 509 265 174 10 chr2 19512215 19512411 -233744172 - MIR SINE MIR -25 237 10 26 0 0 0 chr2 19512418 19512444 -233744139 + AT_rich Low_complexity Low_complexity 1 26 0 404 169 0 26 chr2 19512900 19512977 -233743606 + L1MA6 LINE L1 6226 6300 0 25 0 0 0 chr2 19512993 19513018 -233743565 + AT_rich Low_complexity Low_complexity 1 25 0 357 285 97 21 chr2 19514278 19514422 -233742161 - MIR3 SINE MIR -13 195 41 2046 141 3 0 chr2 19515470 19515769 -233740814 + AluSx SINE Alu 1 300 -12 396 259 107 8 chr2 19515828 19515959 -233740624 - MLT1H LTR MaLR 0 549 406 180 0 0 0 chr2 19515990 19516010 -233740573 + (TC)n Simple_repeat Simple_repeat 2 21 0 * 450 0 0 0 chr2 19516009 19516059 -233740524 + (TG)n Simple_repeat Simple_repeat 1 50 0 433 227 0 0 chr2 19516130 19516218 -233740365 - MLT1H LTR MaLR -381 168 81 1924 186 194 16 chr2 19517634 19518063 -233738520 - MLT1D LTR MaLR 0 505 1 432 190 5 9 chr2 19518194 19518301 -233738282 + L1MA9 LINE L1 6187 6291 0 2036 42 0 8 chr2 19519506 19519746 -233736837 + L1PA4 LINE L1 5917 6154 -1 510 220 62 14 chr2 19520628 19520783 -233735800 - MER5A DNA MER1_type -8 170 5 2144 129 0 25 chr2 19521197 19521515 -233735068 + AluSx SINE Alu 2 311 -1 218 327 45 36 chr2 19521698 19521808 -233734775 - L2 LINE L2 -4 3268 3158 298 252 157 34 chr2 19524570 19524717 -233731866 - MIR3 SINE MIR -4 204 40 486 49 0 0 chr2 19525260 19525321 -233731262 + (TG)n Simple_repeat Simple_repeat 1 61 0 183 345 103 9 chr2 19527163 19527279 -233729304 - L2 LINE L2 0 3272 3146 426 213 11 21 chr2 19527466 19527560 -233729023 + MER96 DNA MER1_type? 1 93 -82 255 262 145 14 chr2 19527591 19527736 -233728847 + MIR SINE MIR 98 261 -1 515 275 84 48 chr2 19527880 19528131 -233728452 + MIR SINE MIR 3 262 0 2190 116 17 0 chr2 19528384 19528685 -233727898 + AluSq SINE Alu 1 306 -7 31 68 0 0 chr2 19528711 19528770 -233727813 + AT_rich Low_complexity Low_complexity 1 59 0 647 136 19 39 chr2 19528792 19528895 -233727688 - FLAM_A SINE Alu -21 121 21 315 71 0 0 chr2 19529641 19529683 -233726900 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 2189 125 7 0 chr2 19530795 19531098 -233725485 - AluSx SINE Alu -7 305 1 373 234 65 19 chr2 19531268 19531375 -233725208 - MIR SINE MIR -148 114 3 602 307 120 26 chr2 19531600 19532092 -233724491 + L1ME4a LINE L1 5582 6119 -2 347 291 0 0 chr2 19533563 19533666 -233722917 + MIR SINE MIR 137 239 -23 208 344 16 0 chr2 19534833 19534897 -233721686 - L2 LINE L2 -82 3190 3126 309 283 133 9 chr2 19535736 19535849 -233720734 - MIR SINE MIR -14 248 122 384 281 82 15 chr2 19537781 19537916 -233718667 - MIR3 SINE MIR -34 174 31 21 36 0 0 chr2 19538285 19538313 -233718270 + AT_rich Low_complexity Low_complexity 1 28 0 540 179 47 0 chr2 19538375 19538481 -233718102 - MLT1H LTR MaLR -2 547 437 887 280 58 18 chr2 19538549 19538824 -233717759 - MLT1H LTR MaLR -252 297 12 453 279 7 14 chr2 19539576 19539716 -233716867 + MIR SINE MIR 118 256 -6 336 64 0 0 chr2 19540606 19540653 -233715930 + (CA)n Simple_repeat Simple_repeat 2 48 0 1983 269 30 31 chr2 19542088 19542665 -233713918 + MLT1E LTR MaLR 9 584 -9 993 226 34 64 chr2 19542666 19542710 -233713873 - MLT2C2 LTR ERVL 0 464 420 357 24 0 0 chr2 19542710 19542752 -233713831 + (CA)n Simple_repeat Simple_repeat 2 43 0 993 226 34 64 chr2 19542752 19543129 -233713454 - MLT2C2 LTR ERVL -44 420 1 210 37 0 0 chr2 19544185 19544212 -233712371 + (GA)n Simple_repeat Simple_repeat 2 28 0 2123 113 7 0 chr2 19545614 19545933 -233710650 + AluSq SINE Alu 2 313 0 696 277 30 20 chr2 19546184 19546386 -233710197 + MIR SINE MIR 49 252 -10 187 212 40 121 chr2 19547791 19547890 -233708693 - L2 LINE L2 -215 3057 2967 350 281 23 39 chr2 19548562 19548690 -233707893 - MIR SINE MIR -65 143 18 237 319 85 0 chr2 19548734 19548828 -233707755 - MIR SINE MIR -92 170 69 601 50 4 1 chr2 19548828 19548910 -233707673 - MSTA LTR MaLR 0 428 357 11202 40 4 1 chr2 19548910 19550252 -233706331 - L1PA5 LINE L1 -962 5184 3839 8099 29 5 1 chr2 19550252 19551213 -233705370 + L1PA5 LINE L1 5198 6154 0 1680 145 108 65 chr2 19551213 19551565 -233705018 - MSTA LTR MaLR -59 369 3 215 343 0 15 chr2 19551565 19551632 -233704951 - MIR SINE MIR -187 75 10 340 316 150 32 chr2 19551657 19551904 -233704679 + L3 LINE CR1 1290 1565 -12 25 31 0 0 chr2 19553003 19553035 -233703548 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 19553223 19553262 -233703321 + AT_rich Low_complexity Low_complexity 1 39 0 183 264 0 19 chr2 19553948 19554001 -233702582 - L2 LINE L2 -1 3312 3261 303 273 65 65 chr2 19554041 19554180 -233702403 + MIR SINE MIR 110 248 -14 1960 146 3 3 chr2 19554491 19554779 -233701804 - AluJb SINE Alu -6 306 19 343 333 0 90 chr2 19554876 19555077 -233701506 - L2 LINE L2 -1 3271 3089 211 292 0 15 chr2 19556539 19556604 -233699979 - L2 LINE L2 -4 3268 3205 281 304 128 49 chr2 19559897 19560203 -233696380 + MLT1L LTR MaLR 148 477 -138 31 44 0 0 chr2 19560439 19560484 -233696099 + AT_rich Low_complexity Low_complexity 1 45 0 4614 30 4 4 chr2 19560484 19561009 -233695574 - L1PA2 LINE L1 0 6155 5631 193 372 149 0 chr2 19561687 19561781 -233694802 - L2 LINE L2 -26 3246 3139 778 229 19 0 chr2 19561996 19562153 -233694430 + Tigger4(Zombi) DNA MER2_type 1 160 -2571 * 3342 125 12 14 chr2 19562151 19562662 -233693921 + Tigger4(Zombi) DNA MER2_type 2222 2731 0 2215 256 52 20 chr2 19562662 19563221 -233693362 - MLT1G1 LTR MaLR -16 579 3 4810 230 15 19 chr2 19563222 19564620 -233691963 - L1M4 LINE L1 -1947 4199 2807 321 326 35 18 chr2 19565331 19565467 -233691116 - MIR SINE MIR -57 151 11 21 36 0 0 chr2 19565812 19565840 -233690743 + AT_rich Low_complexity Low_complexity 1 28 0 358 320 69 26 chr2 19568506 19568737 -233687846 - L1 LINE L1 -1195 4951 4711 252 252 52 70 chr2 19568783 19569013 -233687570 - L1 LINE L1 -1446 4700 4475 589 275 26 10 chr2 19569160 19569353 -233687230 - LTR33 LTR ERVL 0 521 326 348 211 53 0 chr2 19569536 19569612 -233686971 - LTR33 LTR ERVL -435 86 7 291 316 62 42 chr2 19569626 19569914 -233686669 - L1 LINE L1 -1868 4278 3985 27 49 0 0 chr2 19570045 19570086 -233686497 + AT_rich Low_complexity Low_complexity 1 41 0 280 362 47 24 chr2 19570421 19570548 -233686035 + L2 LINE L2 3184 3313 0 642 304 57 17 chr2 19571461 19571691 -233684892 - MIR SINE MIR -4 258 20 298 316 94 8 chr2 19571825 19571942 -233684641 + L2 LINE L2 3146 3272 0 225 0 0 0 chr2 19572085 19572110 -233684473 + (T)n Simple_repeat Simple_repeat 1 25 0 363 346 74 84 chr2 19574074 19574383 -233682200 - L2 LINE L2 0 3272 2967 4048 248 62 17 chr2 19574464 19575845 -233680738 + L1M4 LINE L1 2798 4240 -1906 1126 168 5 0 chr2 19575868 19576065 -233680518 + L1PB3 LINE L1 3 200 -6663 14095 163 59 26 chr2 19576065 19582085 -233674498 + L1PB3 LINE L1 634 6870 0 2674 153 30 32 chr2 19582163 19582731 -233673852 + L1MC2 LINE L1 5762 6328 -16 268 321 8 61 chr2 19582969 19583100 -233673483 + MIR3 SINE MIR 9 132 -76 1089 196 28 49 chr2 19583155 19583482 -233673101 + MER33 DNA MER1_type 1 320 -4 222 37 0 0 chr2 19584565 19584592 -233671991 + (CA)n Simple_repeat Simple_repeat 2 28 0 450 310 30 84 chr2 19584833 19585130 -233671453 + L2 LINE L2 2992 3272 0 21 0 0 0 chr2 19585988 19586009 -233670574 + AT_rich Low_complexity Low_complexity 1 21 0 186 286 20 0 chr2 19586319 19586368 -233670215 + MER5A DNA MER1_type 4 53 -136 292 316 187 0 chr2 19587344 19587499 -233669084 + MIR SINE MIR 36 219 -43 21 71 0 0 chr2 19588423 19588465 -233668118 + AT_rich Low_complexity Low_complexity 1 42 0 401 195 8 59 chr2 19588754 19588872 -233667711 - L1MA9 LINE L1 -38 6274 6163 585 200 16 39 chr2 19589783 19589920 -233666663 + MSTC LTR MaLR 1 134 -231 2808 92 97 0 chr2 19589920 19590292 -233666291 + MLT2A2 LTR ERVL 3 420 -33 249 33 0 0 chr2 19590292 19590322 -233666261 + (TA)n Simple_repeat Simple_repeat 2 31 0 2808 92 97 0 chr2 19590322 19590360 -233666223 + MLT2A2 LTR ERVL 420 453 0 585 200 16 39 chr2 19590360 19590379 -233666204 + MSTC LTR MaLR 134 152 -213 1405 122 4 4 chr2 19590379 19590609 -233665974 + L1MA4 LINE L1 5835 6064 -236 1434 194 8 0 chr2 19590622 19590874 -233665709 + AluJb SINE Alu 13 266 -46 240 35 0 0 chr2 19590880 19590909 -233665674 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1382 139 0 4 chr2 19590910 19591162 -233665421 + L1MA4 LINE L1 6050 6300 0 514 182 74 8 chr2 19591277 19591398 -233665185 + MSTC LTR MaLR 262 390 -6 664 290 101 53 chr2 19592556 19593142 -233663441 - L1ME3A LINE L1 -264 5906 5293 315 360 46 10 chr2 19593152 19593349 -233663234 - L1ME3A LINE L1 -876 5270 5067 20701 30 4 0 chr2 19593828 19597093 -233659490 - L1PA3 LINE L1 -3 6152 2878 20610 40 0 3 chr2 19597094 19599612 -233656971 + L1PA3 LINE L1 374 2884 -3262 4915 180 24 21 chr2 19599745 19601326 -233655257 + L1MA9 LINE L1 4696 6274 -38 181 269 134 60 chr2 19601841 19601975 -233654608 - L2 LINE L2 -160 3112 2969 506 336 16 55 chr2 19602820 19603186 -233653397 - MLT1I LTR MaLR -18 391 40 272 313 148 13 chr2 19603292 19603522 -233653061 + MIR SINE MIR 2 262 0 226 296 70 0 chr2 19603865 19603936 -233652647 + MIR SINE MIR 39 114 -94 444 193 22 92 chr2 19604381 19604609 -233651974 + L1MB1 LINE L1 5115 5326 -820 239 212 61 0 chr2 19604629 19604695 -233651888 + LTR23 LTR ERV1 336 405 -32 335 225 11 49 chr2 19604716 19604832 -233651751 + L1MB1 LINE L1 5321 5436 -726 595 204 17 99 chr2 19604865 19604963 -233651620 + Tigger2 DNA MER2_type 2543 2621 -87 820 146 8 0 chr2 19604963 19605093 -233651490 + FLAM_C SINE Alu 3 133 0 595 204 17 99 chr2 19605093 19605175 -233651408 + Tigger2 DNA MER2_type 2621 2708 0 414 252 19 0 chr2 19605175 19605282 -233651301 + L1ME1 LINE L1 6053 6161 -5 1653 149 69 0 chr2 19605528 19605804 -233650779 - AluJb SINE Alu -12 300 6 7426 179 52 36 chr2 19605809 19607720 -233648863 - L1MC3 LINE L1 -743 5403 4941 342 227 60 60 chr2 19607729 19607879 -233648704 - L1M4 LINE L1 -812 5334 5185 377 300 52 70 chr2 19607976 19608359 -233648224 - L1M4 LINE L1 -978 5168 4793 2440 173 9 19 chr2 19608474 19608937 -233647646 + L1MB1 LINE L1 5559 6016 -152 2387 93 3 51 chr2 19608937 19609312 -233647271 + MER4A LTR ERV1 1 357 -307 2086 142 13 28 chr2 19609284 19609437 -233647146 + MER4A LTR ERV1 176 330 -334 * 2385 166 51 5 chr2 19609437 19609846 -233646737 + MSTA LTR MaLR 1 428 0 8933 175 22 19 chr2 19609846 19611492 -233645091 + MSTA-int LTR MaLR 1 1651 0 2544 128 54 7 chr2 19611492 19611899 -233644684 + MSTA LTR MaLR 1 426 -2 2086 142 13 28 chr2 19611899 19612128 -233644455 + MER4A LTR ERV1 327 664 0 542 142 228 0 chr2 19612128 19612255 -233644328 + L1MB1 LINE L1 6013 6168 0 404 259 87 39 chr2 19612274 19612472 -233644111 - L1M4 LINE L1 -1511 4635 4448 490 9 103 0 chr2 19612472 19612579 -233644004 + (TA)n Simple_repeat Simple_repeat 2 119 0 404 259 87 39 chr2 19612579 19612864 -233643719 - L1M4 LINE L1 -1698 4448 4099 1918 314 113 10 chr2 19613136 19613944 -233642639 - L2 LINE L2 -2389 925 35 315 208 0 83 chr2 19614325 19614421 -233642162 - L1P LINE L1 -2471 3675 3588 714 293 118 48 chr2 19614550 19615068 -233641515 - L1M4 LINE L1 -2644 3502 2949 276 97 39 48 chr2 19615253 19615356 -233641227 + (TA)n Simple_repeat Simple_repeat 2 103 0 196 263 137 11 chr2 19615728 19615823 -233640760 + MIR SINE MIR 124 230 -32 536 0 16 0 chr2 19615919 19615983 -233640600 + (ATATG)n Simple_repeat Simple_repeat 3 67 0 1846 133 105 12 chr2 19615986 19616318 -233640265 + THE1B LTR MaLR 2 364 0 1984 134 13 35 chr2 19616575 19616888 -233639695 - AluSx SINE Alu -6 306 1 423 0 0 0 chr2 19618724 19618771 -233637812 + (TG)n Simple_repeat Simple_repeat 1 47 0 2122 89 6 86 chr2 19621031 19621356 -233635227 - AluSc SINE Alu -10 299 1 362 281 21 0 chr2 19621447 19621543 -233635040 - L1MC4 LINE L1 -1339 6703 6606 305 211 119 9 chr2 19622039 19622148 -233634435 + MER103 DNA DNA 46 166 0 24 0 0 0 chr2 19622311 19622335 -233634248 + AT_rich Low_complexity Low_complexity 1 24 0 288 53 0 0 chr2 19622403 19622441 -233634142 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 486 312 39 13 chr2 19623258 19623412 -233633171 - MIR SINE MIR -98 164 7 529 266 60 64 chr2 19624101 19624162 -233632421 + MIR SINE MIR 12 72 -190 1817 156 0 33 chr2 19624162 19624464 -233632119 - AluSx SINE Alu -20 292 1 529 266 60 64 chr2 19624464 19624620 -233631963 + MIR SINE MIR 72 228 -34 400 280 92 19 chr2 19625254 19625487 -233631096 - L1MC4 LINE L1 -786 5360 5189 383 282 123 43 chr2 19625720 19625939 -233630644 - L1M4 LINE L1 -3201 2945 2690 2566 218 30 32 chr2 19625939 19626564 -233630019 - MLT1E3 LTR MaLR 0 624 1 383 282 123 43 chr2 19626564 19626670 -233629913 - L1M4 LINE L1 -3456 2690 2594 235 111 19 19 chr2 19626808 19626862 -233629721 + (TA)n Simple_repeat Simple_repeat 2 55 0 214 191 24 0 chr2 19627082 19627124 -233629459 + CT-rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr2 19627141 19627162 -233629421 + (CA)n Simple_repeat Simple_repeat 2 22 0 244 284 84 21 chr2 19627253 19627348 -233629235 + L2 LINE L2 3211 3311 -2 31 44 0 0 chr2 19627448 19627493 -233629090 + AT_rich Low_complexity Low_complexity 1 45 0 580 261 27 49 chr2 19627523 19627707 -233628876 + L2 LINE L2 2564 2743 -571 225 290 16 0 chr2 19627740 19627802 -233628781 - MER94 DNA DNA -2 132 70 187 360 41 29 chr2 19628755 19628927 -233627656 - L2 LINE L2 -173 3099 2926 296 377 33 25 chr2 19629446 19629568 -233627015 + MIR3 SINE MIR 3 125 -83 381 22 0 0 chr2 19630481 19630527 -233626056 + (TG)n Simple_repeat Simple_repeat 1 46 0 456 67 0 0 chr2 19630762 19630822 -233625761 + (CA)n Simple_repeat Simple_repeat 2 61 0 667 173 53 0 chr2 19632315 19632465 -233624118 - L1MA8 LINE L1 -2 6289 6132 207 418 28 14 chr2 19634226 19634367 -233622216 + L2 LINE L2 3128 3270 -2 249 83 0 0 chr2 19635677 19635713 -233620870 + (TC)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr2 19636063 19636091 -233620492 + AT_rich Low_complexity Low_complexity 1 28 0 236 320 53 0 chr2 19636400 19636475 -233620108 - MIR3 SINE MIR -19 189 111 1035 157 103 60 chr2 19636478 19636759 -233619824 + MLT1D LTR MaLR 1 293 -212 202 220 0 51 chr2 19637963 19638022 -233618561 + CT-rich Low_complexity Low_complexity 1 56 0 199 288 70 48 chr2 19638942 19639171 -233617412 + L2 LINE L2 2032 2265 -1049 397 275 124 50 chr2 19639319 19639537 -233617046 + MIR SINE MIR 20 253 -9 1914 126 11 0 chr2 19640159 19640471 -233616112 + AluSx SINE Alu 1 315 0 399 340 7 7 chr2 19641653 19641800 -233614783 + MIR SINE MIR 3 149 -113 1766 109 9 103 chr2 19641860 19642180 -233614403 - AluY SINE Alu -21 290 1 2067 240 96 94 chr2 19642466 19644165 -233612418 + L1MDa LINE L1 52 1754 -4786 1394 158 35 8 chr2 19644192 19644440 -233612143 - MSTB1 LTR MaLR 0 432 178 4202 74 22 36 chr2 19644440 19645584 -233610999 - MER11A LTR ERVK 0 1266 1 1085 128 0 6 chr2 19645584 19645747 -233610836 - MSTB1 LTR MaLR -248 178 17 481 150 0 0 chr2 19645761 19645861 -233610722 + L1MDa LINE L1 2005 2104 -4436 1397 206 110 0 chr2 19645932 19646213 -233610370 + AluJb SINE Alu 1 312 0 238 175 0 32 chr2 19646305 19646368 -233610215 - L1MC4 LINE L1 -1339 6703 6643 * 290 200 33 0 chr2 19646335 19646425 -233610158 + L1MDa LINE L1 2323 2415 -4125 * 12896 158 76 11 chr2 19646415 19650773 -233605810 + L1PB1 LINE L1 453 5163 -1699 216 0 0 0 chr2 19650773 19650797 -233605786 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 12896 158 76 11 chr2 19650797 19651280 -233605303 + L1PB1 LINE L1 5163 5613 -1249 1955 109 138 9 chr2 19651281 19651305 -233605278 + L1PB1 LINE L1 6473 6493 -374 360 0 0 0 chr2 19651305 19651345 -233605238 + (CA)n Simple_repeat Simple_repeat 2 41 0 1955 109 138 9 chr2 19651345 19651669 -233604914 + L1PB1 LINE L1 6493 6866 -1 783 141 7 27 chr2 19651825 19651974 -233604609 + L1MA10 LINE L1 6186 6331 -3 1127 181 54 10 chr2 19651983 19652408 -233604175 + L1MDa LINE L1 2393 2835 -3705 923 168 20 35 chr2 19652533 19652730 -233603853 - L1MD3 LINE L1 -710 7285 7092 893 259 91 53 chr2 19652744 19653250 -233603333 - L1MD3 LINE L1 -1988 5820 5296 2556 121 77 22 chr2 19653598 19654081 -233602502 - L1MA8 LINE L1 0 6291 5779 195 42 0 0 chr2 19654081 19654105 -233602478 + (CA)n Simple_repeat Simple_repeat 2 25 0 2556 121 77 22 chr2 19654105 19654117 -233602466 - L1MA8 LINE L1 -512 5779 5769 878 293 9 19 chr2 19654117 19654434 -233602149 + HsTC2a DNA Tc2 34 347 -397 763 215 45 19 chr2 19654505 19654770 -233601813 + HsTC2a DNA Tc2 471 742 0 361 274 40 8 chr2 19655084 19655208 -233601375 + L1M2b LINE L1 1588 1715 -5494 * 8002 210 36 26 chr2 19655198 19658618 -233597965 + L1M2 LINE L1 789 4244 -2604 335 280 4 17 chr2 19658655 19658776 -233597807 - MLT1I LTR MaLR -208 203 80 796 251 66 29 chr2 19659768 19659899 -233596684 + MER45C DNA AcHobo 14 139 -814 2150 167 82 18 chr2 19659899 19660337 -233596246 + MLT1C LTR MaLR 1 466 -1 796 251 66 29 chr2 19660337 19660448 -233596135 + MER45C DNA AcHobo 139 265 -688 709 223 154 0 chr2 19660518 19660706 -233595877 + MER45C DNA AcHobo 730 946 -7 194 271 140 47 chr2 19662427 19662534 -233594049 - L2 LINE L2 -5 3308 3192 923 294 189 18 chr2 19663101 19664099 -233592484 + L2 LINE L2 2140 3313 0 543 291 20 5 chr2 19664376 19664572 -233592011 - MIR SINE MIR 0 262 64 255 244 89 65 chr2 19664604 19664727 -233591856 + MLT1K LTR MaLR 378 503 -85 237 33 0 0 chr2 19665995 19666025 -233590558 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 734 86 0 0 chr2 19666435 19666540 -233590043 + AluSp/q SINE Alu 207 311 -2 23 0 0 0 chr2 19667858 19667881 -233588702 + AT_rich Low_complexity Low_complexity 1 23 0 333 341 29 59 chr2 19667965 19668238 -233588345 - L2 LINE L2 -2072 1242 978 292 240 115 44 chr2 19668338 19668521 -233588062 - L1ME4a LINE L1 -74 6047 5852 307 287 45 7 chr2 19668553 19668693 -233587890 - MIR SINE MIR -62 146 16 303 282 94 18 chr2 19669324 19669494 -233587089 - MIR SINE MIR -4 258 76 253 302 35 0 chr2 19669813 19669899 -233586684 - MIR3 SINE MIR -6 202 114 2165 128 0 0 chr2 19670100 19670390 -233586193 + AluSx SINE Alu 2 291 -21 195 42 0 0 chr2 19670393 19670417 -233586166 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 457 310 52 54 chr2 19670998 19671421 -233585162 - L2 LINE L2 -1905 1409 912 21 0 0 0 chr2 19672246 19672267 -233584316 + AT_rich Low_complexity Low_complexity 1 21 0 204 308 63 56 chr2 19672401 19672544 -233584039 - MIR SINE MIR -117 145 2 1931 203 57 5 chr2 19673987 19674425 -233582158 + L1MD3 LINE L1 7535 7995 0 403 278 66 54 chr2 19674665 19674924 -233581659 - MIR SINE MIR 0 262 1 198 286 29 14 chr2 19674954 19675024 -233581559 - L2 LINE L2 -24 3248 3178 270 264 9 57 chr2 19675048 19675154 -233581429 - MIR SINE MIR -66 196 96 515 56 99 0 chr2 19675840 19675911 -233580672 + MADE1 DNA Mariner 1 78 -2 192 77 0 0 chr2 19676050 19676076 -233580507 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 243 326 61 99 chr2 19676077 19676390 -233580193 - L2 LINE L2 -15 3257 2957 2302 104 0 0 chr2 19677524 19677822 -233578761 - AluY SINE Alu -13 298 1 230 196 28 75 chr2 19679545 19679652 -233576931 + GA-rich Low_complexity Low_complexity 2 103 0 448 256 100 18 chr2 19680567 19680726 -233575857 + MER5B DNA MER1_type 15 175 -3 221 290 178 0 chr2 19681307 19681414 -233575169 + MIR3 SINE MIR 81 206 -2 219 276 38 29 chr2 19681540 19681645 -233574938 - MIR SINE MIR -109 153 48 235 340 55 63 chr2 19683673 19683911 -233572672 - L2 LINE L2 -3 3269 3034 1470 215 90 54 chr2 19683941 19684387 -233572196 + MLT1C LTR MaLR 6 467 0 274 227 68 34 chr2 19684679 19684767 -233571816 + MLT1K LTR MaLR 142 232 -356 635 161 108 0 chr2 19685254 19685393 -233571190 - MSTC LTR MaLR -244 152 1 6379 235 67 44 chr2 19685393 19685737 -233570846 - MSTD-int LTR MaLR 0 1735 1401 1831 96 69 38 chr2 19685737 19686028 -233570555 - AluSx SINE Alu -8 304 5 6379 235 67 44 chr2 19686028 19687377 -233569206 - MSTD-int LTR MaLR -334 1401 2 1622 192 70 44 chr2 19687379 19687765 -233568818 - MSTD LTR MaLR 0 396 1 333 277 0 64 chr2 19688206 19688347 -233568236 + MIR SINE MIR 86 217 -45 2334 168 33 12 chr2 19689541 19689964 -233566619 + MSTB1 LTR MaLR 1 432 0 415 287 7 21 chr2 19690081 19690224 -233566359 - MIR SINE MIR -54 208 68 2319 105 0 0 chr2 19691118 19691413 -233565170 + AluSp SINE Alu 1 295 -18 225 390 50 7 chr2 19691595 19691736 -233564847 - L3b LINE CR1 -87 1496 1350 39 0 0 0 chr2 19691846 19691885 -233564698 + AT_rich Low_complexity Low_complexity 1 39 0 2170 143 0 83 chr2 19691897 19692295 -233564288 - MLT1A1 LTR MaLR 0 365 1 254 262 82 83 chr2 19692686 19692848 -233563735 - L1ME LINE L1 -426 5744 5583 2332 98 10 0 chr2 19692848 19693153 -233563430 - AluSq SINE Alu -5 308 1 254 262 82 83 chr2 19693153 19693314 -233563269 - L1ME LINE L1 -587 5583 5349 472 298 53 21 chr2 19693344 19693626 -233562957 - L1ME LINE L1 -805 5341 5051 183 297 47 16 chr2 19693782 19693846 -233562737 + MIR SINE MIR 111 176 -86 213 292 15 0 chr2 19695709 19695774 -233560809 + MIR SINE MIR 2 67 -195 2307 120 0 0 chr2 19695880 19696189 -233560394 + AluSx SINE Alu 1 309 -3 24 0 0 0 chr2 19697433 19697457 -233559126 + AT_rich Low_complexity Low_complexity 1 24 0 1394 197 15 4 chr2 19697564 19697833 -233558750 + L1MC1 LINE L1 6061 6332 -1 285 167 0 0 chr2 19698139 19698193 -233558390 + T-rich Low_complexity Low_complexity 1 54 0 952 295 77 19 chr2 19700794 19701106 -233555477 - MER115 DNA AcHobo -329 364 35 316 304 29 0 chr2 19701173 19701275 -233555308 + MIR SINE MIR 35 139 -123 1104 161 32 37 chr2 19702475 19702693 -233553890 - MER20 DNA MER1_type -2 217 1 393 317 34 47 chr2 19702888 19703106 -233553477 - MIR SINE MIR -31 231 11 293 0 0 26 chr2 19704278 19704316 -233552267 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 578 247 47 12 chr2 19704957 19705127 -233551456 + MIR3 SINE MIR 33 208 0 426 85 0 0 chr2 19705916 19705975 -233550608 + (TTA)n Simple_repeat Simple_repeat 2 60 0 261 0 0 0 chr2 19706675 19706704 -233549879 + (TC)n Simple_repeat Simple_repeat 1 29 0 200 360 73 0 chr2 19708772 19708908 -233547675 + L2 LINE L2 2609 2754 -560 237 316 20 46 chr2 19709009 19709161 -233547422 + L2 LINE L2 2895 3042 -230 * 1463 280 245 55 chr2 19709147 19710821 -233545762 + L2 LINE L2 316 2433 -881 288 0 0 0 chr2 19710821 19710853 -233545730 + (CA)n Simple_repeat Simple_repeat 1 32 0 1463 280 245 55 chr2 19710853 19711176 -233545407 + L2 LINE L2 2433 2693 -621 188 0 74 0 chr2 19711176 19711203 -233545380 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 3106 123 10 26 chr2 19711213 19711708 -233544875 - L1MC1 LINE L1 -420 5913 5427 528 302 28 74 chr2 19711709 19712097 -233544486 + L2 LINE L2 2688 3055 -258 559 205 80 113 chr2 19712840 19713079 -233543504 - MER112 DNA MER1_type -13 247 17 299 341 96 15 chr2 19713300 19713435 -233543148 + MIR3 SINE MIR 31 176 -32 1765 181 13 7 chr2 19713694 19714004 -233542579 - AluJb SINE Alu 0 312 1 2293 114 0 19 chr2 19714209 19714526 -233542057 - AluY SINE Alu 0 311 1 533 315 94 16 chr2 19715957 19716211 -233540372 - L3 LINE CR1 -175 1402 1129 1996 188 48 0 chr2 19717854 19718226 -233538357 + MLT1B LTR MaLR 1 390 0 481 312 39 24 chr2 19718386 19718591 -233537992 - MIR SINE MIR -34 228 21 197 254 79 16 chr2 19718937 19719000 -233537583 + MIR3 SINE MIR 135 201 -7 789 171 11 11 chr2 19719425 19719601 -233536982 + G-rich Low_complexity Low_complexity 4 179 0 587 199 13 32 chr2 19719619 19719873 -233536710 + G-rich Low_complexity Low_complexity 1 249 0 312 158 0 0 chr2 19719873 19719930 -233536653 + GA-rich Low_complexity Low_complexity 1 57 0 340 292 168 0 chr2 19720302 19720415 -233536168 + L2 LINE L2 3182 3313 0 2196 139 0 0 chr2 19720873 19721176 -233535407 + AluSx SINE Alu 7 309 -3 577 158 0 0 chr2 19721502 19721597 -233534986 - L1MC3 LINE L1 -492 7293 7199 292 272 43 0 chr2 19721597 19721689 -233534894 - MLT1F1 LTR MaLR -437 130 35 423 136 37 0 chr2 19721689 19721770 -233534813 - L1MC3 LINE L1 -688 7097 7014 2823 179 48 16 chr2 19721774 19722355 -233534228 - L1MC3 LINE L1 -820 6965 6366 1137 272 46 12 chr2 19722358 19722681 -233533902 - MER45C DNA AcHobo -140 813 480 896 204 47 5 chr2 19722678 19722869 -233533714 - MER45C DNA AcHobo -754 199 1 * 359 220 21 99 chr2 19723397 19723563 -233533020 + MIR SINE MIR 97 255 -7 181 307 0 40 chr2 19724470 19724545 -233532038 - L2 LINE L2 -20 3252 3181 645 292 0 0 chr2 19724611 19724779 -233531804 - MIR SINE MIR -14 248 81 857 253 101 34 chr2 19724779 19725167 -233531416 - LTR16B LTR ERVL 0 464 51 227 222 12 123 chr2 19725230 19725311 -233531272 - MIR SINE MIR -187 75 4 388 365 47 28 chr2 19725500 19725714 -233530869 - L2 LINE L2 -89 3183 2966 242 214 0 18 chr2 19725786 19725842 -233530741 - L2 LINE L2 -339 2974 2920 23 0 0 0 chr2 19726564 19726587 -233529996 + AT_rich Low_complexity Low_complexity 1 23 0 266 160 60 0 chr2 19726665 19726715 -233529868 - MLT1G1 LTR MaLR -182 413 361 917 252 20 31 chr2 19726758 19727012 -233529571 - MLT1G1 LTR MaLR -342 253 3 461 275 182 22 chr2 19727693 19727962 -233528621 + MLT1K LTR MaLR 277 588 0 1043 266 68 64 chr2 19729340 19729807 -233526776 - L2 LINE L2 -4 3309 2841 186 298 0 0 chr2 19730786 19730833 -233525750 + MIR SINE MIR 98 144 -64 537 272 90 23 chr2 19731668 19731993 -233524590 + MLT1I LTR MaLR 4 406 -3 423 315 23 15 chr2 19732906 19733036 -233523547 + MIR3 SINE MIR 78 208 0 219 146 0 0 chr2 19733137 19733178 -233523405 + (CA)n Simple_repeat Simple_repeat 2 42 0 186 43 0 0 chr2 19733677 19733700 -233522883 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 * 198 0 0 0 chr2 19733699 19733721 -233522862 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 333 0 0 0 chr2 19733720 19733757 -233522826 + (CA)n Simple_repeat Simple_repeat 1 37 0 329 327 50 0 chr2 19734564 19734665 -233521918 + MIR SINE MIR 40 145 -63 2411 134 0 30 chr2 19735355 19735757 -233520826 + MLT1B LTR MaLR 1 390 0 398 292 46 0 chr2 19735795 19735925 -233520658 - MIR3 SINE MIR -8 200 65 1838 149 27 7 chr2 19736762 19737057 -233519526 - AluSx SINE Alu -11 301 1 912 355 112 23 chr2 19738856 19739608 -233516975 + L1M4 LINE L1 3705 4523 -1623 180 276 0 69 chr2 19739707 19739765 -233516818 + L3 LINE CR1 1413 1466 -111 21 36 0 0 chr2 19740164 19740192 -233516391 + AT_rich Low_complexity Low_complexity 1 28 0 547 221 0 47 chr2 19740407 19740534 -233516049 + L2 LINE L2 3193 3313 0 310 293 162 39 chr2 19740541 19740800 -233515783 - L1M4 LINE L1 -786 5360 5070 425 331 15 15 chr2 19741691 19741821 -233514762 - MIR SINE MIR -121 141 12 474 248 19 0 chr2 19741823 19741928 -233514655 - MER81 DNA DNA 0 114 8 1234 174 70 52 chr2 19741929 19742284 -233514299 - MSTA LTR MaLR -2 426 3 201 94 0 0 chr2 19742356 19742388 -233514195 + (TC)n Simple_repeat Simple_repeat 2 33 0 465 295 31 81 chr2 19743636 19743894 -233512689 - MIR SINE MIR 0 262 18 240 35 0 0 chr2 19745317 19745346 -233511237 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2156 146 3 0 chr2 19746006 19746315 -233510268 - AluJb SINE Alu -2 310 1 1545 216 60 6 chr2 19746497 19746848 -233509735 + MLT1C LTR MaLR 95 464 -3 755 232 179 25 chr2 19746875 19747155 -233509428 + L2 LINE L2 2031 2353 -961 253 263 66 0 chr2 19747299 19747375 -233509208 - L2 LINE L2 -39 3233 3153 1305 263 24 29 chr2 19750140 19750419 -233506164 + L2 LINE L2 2164 2442 -872 1888 138 29 109 chr2 19750419 19750867 -233505716 + MLT2D LTR ERVL 1 412 -2 1305 263 24 29 chr2 19750867 19751006 -233505577 + L2 LINE L2 2442 2580 -734 1178 140 0 22 chr2 19751013 19751192 -233505391 + AluJb SINE Alu 136 310 -2 328 330 92 16 chr2 19751205 19751390 -233505193 + L2 LINE L2 3085 3283 -30 1624 219 23 6 chr2 19751392 19751744 -233504839 - MLT1A1 LTR MaLR -7 358 1 607 208 158 35 chr2 19752832 19753034 -233503549 - MIR SINE MIR -5 257 31 335 297 185 49 chr2 19753124 19753514 -233503069 + L2 LINE L2 2871 3313 0 346 280 8 8 chr2 19753726 19753844 -233502739 + Charlie5 DNA MER1_type 7 124 -2488 2077 113 25 6 chr2 19753855 19754217 -233502366 + Charlie5 DNA MER1_type 2245 2613 0 2383 131 44 109 chr2 19754659 19755162 -233501421 + MER101 LTR ERV1 4 473 -1 24 0 0 0 chr2 19755503 19755527 -233501056 + AT_rich Low_complexity Low_complexity 1 24 0 1980 192 21 45 chr2 19756135 19756604 -233499979 + MLT1D LTR MaLR 1 458 -47 444 232 92 14 chr2 19757002 19757144 -233499439 - MIR3 SINE MIR -31 177 25 275 235 0 15 chr2 19758545 19758613 -233497970 - MIR SINE MIR -16 246 180 718 214 15 82 chr2 19758633 19758829 -233497754 - MER5A DNA MER1_type -6 183 1 434 298 71 40 chr2 19758852 19759077 -233497506 - MIR SINE MIR -26 236 5 1031 235 70 9 chr2 19759701 19759931 -233496652 - MIR SINE MIR -17 245 2 246 200 29 0 chr2 19759995 19760065 -233496518 + (TAG)n Simple_repeat Simple_repeat 2 73 0 373 339 6 0 chr2 19760094 19760271 -233496312 + (TAG)n Simple_repeat Simple_repeat 2 179 0 222 225 0 0 chr2 19760305 19760385 -233496198 + (TAG)n Simple_repeat Simple_repeat 3 82 0 725 341 28 4 chr2 19760490 19760739 -233495844 + MIR SINE MIR 1 255 -7 538 290 56 28 chr2 19761717 19761931 -233494652 - MIR SINE MIR -6 256 37 288 346 74 52 chr2 19762217 19762448 -233494135 - L2 LINE L2 -470 2844 2609 741 117 0 0 chr2 19764297 19764434 -233492149 + (GGAA)n Simple_repeat Simple_repeat 3 139 0 1817 100 76 17 chr2 19766493 19766782 -233489801 - AluSx SINE Alu -6 306 1 180 345 0 17 chr2 19766900 19766958 -233489625 - MIR SINE MIR -6 256 200 459 326 22 11 chr2 19769128 19769306 -233487277 + MIR3 SINE MIR 22 201 -7 226 250 50 0 chr2 19769480 19769560 -233487023 + L1MC4 LINE L1 6617 6700 -1342 276 30 0 0 chr2 19769565 19769598 -233486985 + (TG)n Simple_repeat Simple_repeat 1 33 0 183 323 0 0 chr2 19769693 19769755 -233486828 + L2 LINE L2 2996 3057 -215 498 259 63 11 chr2 19770011 19770200 -233486383 + L1ME2 LINE L1 4943 5141 -1005 1097 142 18 60 chr2 19770201 19770419 -233486164 + AluJb SINE Alu 86 294 -18 3060 236 41 22 chr2 19770431 19771401 -233485182 + L1ME2 LINE L1 5162 6156 -8 240 329 25 0 chr2 19771431 19771510 -233485073 - L2 LINE L2 -4 3309 3229 378 0 0 0 chr2 19771588 19771630 -233484953 + (CA)n Simple_repeat Simple_repeat 1 42 0 541 303 91 0 chr2 19772506 19772704 -233483879 + MIR SINE MIR 46 261 -1 282 382 40 10 chr2 19772892 19773091 -233483492 - MIR SINE MIR -39 223 19 410 351 50 45 chr2 19773768 19774210 -233482373 - L2 LINE L2 0 3272 2829 1085 194 41 0 chr2 19774314 19774510 -233482073 - MER3 DNA MER1_type -5 204 1 315 0 0 0 chr2 19775790 19775825 -233480758 + (TG)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr2 19776705 19776728 -233479855 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 249 325 26 0 chr2 19778283 19778360 -233478223 - MIR SINE MIR -16 246 168 627 194 58 52 chr2 19778474 19778665 -233477918 - MER112 DNA MER1_type -3 257 66 673 302 60 65 chr2 19780333 19780684 -233475899 - L2 LINE L2 -2 3270 2922 576 367 84 19 chr2 19783084 19783770 -233472813 - L2 LINE L2 -176 3096 2363 429 204 0 11 chr2 19785439 19785527 -233471056 + MLT1C LTR MaLR 381 467 0 396 298 35 0 chr2 19787556 19787670 -233468913 - MIR SINE MIR -35 227 110 399 314 15 31 chr2 19787741 19787872 -233468711 - MIR3 SINE MIR -6 202 73 2082 124 3 0 chr2 19788759 19789065 -233467518 + AluSc SINE Alu 1 307 -2 208 271 21 0 chr2 19789207 19789255 -233467328 + L2 LINE L2 3250 3298 -15 1286 243 93 33 chr2 19789272 19789671 -233466912 + MLT1J2 LTR MaLR 3 425 -25 1983 117 43 0 chr2 19790858 19791157 -233465426 + AluSx SINE Alu 1 312 0 184 206 29 200 chr2 19791208 19791378 -233465205 + MIR SINE MIR 56 196 -66 192 135 0 0 chr2 19791654 19791691 -233464892 + (TG)n Simple_repeat Simple_repeat 1 37 0 192 333 18 105 chr2 19791782 19791896 -233464687 - L2 LINE L2 -182 3090 2987 227 39 0 0 chr2 19794681 19794707 -233461876 + AluY SINE Alu 11 36 -264 633 141 0 0 chr2 19794707 19794799 -233461784 + AluSg/x SINE Alu 206 297 -13 308 272 154 6 chr2 19794800 19794962 -233461621 + L1M4 LINE L1 2435 2620 -3526 1018 169 4 37 chr2 19795158 19795401 -233461182 + L1M4 LINE L1 2645 2879 -3267 1510 204 64 52 chr2 19795410 19795850 -233460733 - L1MA9 LINE L1 -37 6275 5831 * 1676 232 99 3 chr2 19795846 19796420 -233460163 + L1M4 LINE L1 2840 3468 -2678 2389 202 32 4 chr2 19796432 19796893 -233459690 + L1MB5 LINE L1 3 476 -6373 426 103 0 0 chr2 19796954 19797012 -233459571 - Alu SINE Alu -259 59 2 7371 206 30 15 chr2 19797097 19799578 -233457005 + L1MB5 LINE L1 4177 6694 -182 465 19 0 0 chr2 19799613 19799667 -233456916 + (TG)n Simple_repeat Simple_repeat 2 55 0 201 121 0 0 chr2 19799681 19799714 -233456869 + (TA)n Simple_repeat Simple_repeat 1 33 0 1971 149 30 41 chr2 19799720 19799865 -233456718 - MLT2D LTR ERVL -50 364 219 1821 157 24 42 chr2 19799865 19800247 -233456336 - THE1C LTR MaLR 0 375 1 1971 149 30 41 chr2 19800247 19800469 -233456114 - MLT2D LTR ERVL -195 219 1 569 240 47 47 chr2 19800469 19800499 -233456084 + L1MB5 LINE L1 6698 6727 -149 2502 175 33 4 chr2 19800499 19800951 -233455632 - MLT1C LTR MaLR -2 465 1 569 240 47 47 chr2 19800951 19801091 -233455492 + L1MB5 LINE L1 6726 6868 -8 1770 154 14 0 chr2 19801644 19801937 -233454646 + AluSx SINE Alu 3 299 -13 190 397 0 0 chr2 19802173 19802251 -233454332 - MER5C DNA MER1_type -245 79 2 1239 238 134 2 chr2 19802417 19802820 -233453763 + L1ME3A LINE L1 5710 6165 -5 437 195 73 0 chr2 19803501 19803583 -233453000 + MER91C DNA MER1_type 1 88 -52 420 20 0 0 chr2 19803599 19803648 -233452935 + (TC)n Simple_repeat Simple_repeat 1 49 0 183 235 47 47 chr2 19805396 19805407 -233451176 + MER5A DNA MER1_type 6 16 -173 282 250 79 85 chr2 19805407 19805548 -233451035 - MER5B DNA MER1_type -2 187 16 202 243 100 43 chr2 19806313 19806383 -233450200 + L2 LINE L2 3168 3241 -31 1255 298 100 49 chr2 19808430 19809437 -233447146 - L2 LINE L2 0 3272 2213 293 297 123 14 chr2 19809567 19809828 -233446755 + L2 LINE L2 2720 3002 -270 337 299 41 14 chr2 19810605 19810752 -233445831 + L2 LINE L2 2825 2975 -338 2433 92 14 20 chr2 19811266 19811623 -233444960 + THE1A LTR MaLR 1 355 0 9271 96 34 1 chr2 19811623 19812868 -233443715 + THE1A-int LTR MaLR 1 1286 -294 354 81 46 23 chr2 19813224 19813311 -233443272 + (CA)n Simple_repeat Simple_repeat 2 90 0 827 62 9 26 chr2 19813337 19813450 -233443133 + THE1B LTR MaLR 1 111 -253 394 135 49 34 chr2 19813451 19813779 -233442804 + (CA)n Simple_repeat Simple_repeat 1 333 0 429 240 40 16 chr2 19814189 19814314 -233442269 + MIR SINE MIR 19 146 -62 333 0 0 0 chr2 19814667 19814704 -233441879 + (CA)n Simple_repeat Simple_repeat 2 38 0 390 337 57 73 chr2 19815608 19815908 -233440675 - L2 LINE L2 -20 3252 2958 2010 143 3 26 chr2 19817555 19817862 -233438721 + AluJo SINE Alu 2 301 -11 510 250 18 0 chr2 19819610 19819722 -233436861 - MER81 DNA DNA 0 114 1 2052 108 6 71 chr2 19820238 19820563 -233436020 - AluY SINE Alu -5 306 3 1979 210 40 62 chr2 19820762 19821342 -233435241 - L1MD3 LINE L1 -1 7994 7428 1356 195 4 12 chr2 19821625 19821866 -233434717 - MER8 DNA MER2_type 0 239 1 1924 116 58 69 chr2 19821901 19822280 -233434303 - THE1C LTR MaLR 0 375 1 489 333 18 12 chr2 19822794 19822965 -233433618 - MIR3 SINE MIR -21 187 16 2282 105 0 0 chr2 19824116 19824412 -233432171 + AluSg SINE Alu 1 296 -14 279 292 159 18 chr2 19826163 19826276 -233430307 + L2 LINE L2 3181 3309 -4 417 356 37 6 chr2 19826953 19827116 -233429467 + MIR SINE MIR 9 176 -86 193 336 18 45 chr2 19827287 19827397 -233429186 + L2 LINE L2 3008 3114 -158 495 286 148 5 chr2 19828978 19829188 -233427395 - MIR SINE MIR -14 248 9 264 239 109 11 chr2 19830000 19830092 -233426491 + MIR SINE MIR 35 135 -127 401 253 121 31 chr2 19830097 19830335 -233426248 - MIR SINE MIR 0 262 2 528 286 100 29 chr2 19831287 19831497 -233425086 - MIR SINE MIR -29 233 9 485 279 126 0 chr2 19831962 19832145 -233424438 + LTR33 LTR ERVL 3 208 -313 309 209 116 47 chr2 19832225 19832354 -233424229 + LTR33 LTR ERVL 384 521 0 241 264 11 58 chr2 19832918 19833005 -233423578 - MIR SINE MIR -94 114 32 1645 192 0 31 chr2 19833118 19833436 -233423147 + AluJo SINE Alu 1 308 -4 307 341 66 43 chr2 19834255 19834513 -233422070 - L3 LINE CR1 -9 1568 1305 716 263 158 15 chr2 19834584 19834926 -233421657 - L2 LINE L2 0 3313 2923 2297 122 0 3 chr2 19835069 19835373 -233421210 - AluSx SINE Alu -9 303 1 183 237 0 0 chr2 19835945 19835983 -233420600 + L3 LINE CR1 865 902 -675 468 310 141 17 chr2 19837073 19837363 -233419220 - L2 LINE L2 -77 3195 2870 226 228 18 0 chr2 19837758 19837815 -233418768 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 203 136 45 0 chr2 19837819 19837863 -233418720 + GA-rich Low_complexity Low_complexity 3 48 0 286 366 21 21 chr2 19838836 19838978 -233417605 + MIR3 SINE MIR 2 143 -65 219 69 0 0 chr2 19839570 19839599 -233416984 + (A)n Simple_repeat Simple_repeat 1 29 0 288 333 33 17 chr2 19840595 19840715 -233415868 + L3 LINE CR1 1271 1392 -185 252 196 0 0 chr2 19841361 19841407 -233415176 - MIR SINE MIR -115 147 102 280 278 60 76 chr2 19842314 19842487 -233414096 - MIR SINE MIR -68 140 22 23 0 0 0 chr2 19842638 19842661 -233413922 + AT_rich Low_complexity Low_complexity 1 23 0 268 241 211 15 chr2 19843144 19843277 -233413306 + MIR SINE MIR 100 258 -4 187 330 134 0 chr2 19843859 19843956 -233412627 - L2 LINE L2 -18 3254 3145 315 347 97 19 chr2 19845337 19845553 -233411030 + L2 LINE L2 3000 3232 -40 435 38 0 0 chr2 19845570 19845623 -233410960 + (TGGA)n Simple_repeat Simple_repeat 2 54 0 372 22 0 0 chr2 19846411 19846456 -233410127 + (TC)n Simple_repeat Simple_repeat 1 45 0 413 302 11 2 chr2 19847031 19847142 -233409441 + MIR SINE MIR 5 116 -92 252 0 0 0 chr2 19847185 19847213 -233409370 + (TG)n Simple_repeat Simple_repeat 2 29 0 1172 297 53 10 chr2 19847215 19847801 -233408782 - L1MC4a LINE L1 -1899 5909 5299 946 306 40 55 chr2 19848185 19848790 -233407793 - ERVL LTR ERVL -4091 1673 1078 266 214 0 0 chr2 19849635 19849691 -233406892 - LTR33A LTR ERVL 0 523 468 1904 162 58 56 chr2 19850437 19850850 -233405733 - MLT2D LTR ERVL 0 414 1 203 281 101 76 chr2 19850852 19851090 -233405493 + L2 LINE L2 3029 3272 0 2577 60 0 13 chr2 19851208 19851522 -233405061 - AluY SINE Alu -1 310 1 189 234 0 78 chr2 19852417 19852481 -233404102 + MIR SINE MIR 66 124 -138 405 136 0 0 chr2 19853770 19853836 -233402747 + (TTTA)n Simple_repeat Simple_repeat 1 66 0 21 57 0 0 chr2 19854362 19854397 -233402186 + AT_rich Low_complexity Low_complexity 1 35 0 1504 169 43 66 chr2 19854406 19854707 -233401876 + AluSq SINE Alu 1 294 -19 728 260 80 72 chr2 19854730 19855107 -233401476 - MLT1I LTR MaLR -2 407 28 309 210 0 0 chr2 19855144 19855206 -233401377 + MER94 DNA DNA 8 69 -65 2398 92 0 3 chr2 19855318 19855624 -233400959 + AluSx SINE Alu 1 305 -7 1001 139 29 0 chr2 19855679 19855852 -233400731 + L1PA16 LINE L1 5958 6135 -31 318 353 8 8 chr2 19856147 19856266 -233400317 + MIR3 SINE MIR 13 131 -77 348 133 0 0 chr2 19857003 19857063 -233399520 + (CA)n Simple_repeat Simple_repeat 1 60 0 192 188 188 25 chr2 19857803 19857883 -233398700 - MIR SINE MIR -68 140 48 199 260 156 0 chr2 19857995 19858091 -233398492 + MIR SINE MIR 145 255 -7 3481 49 2 2 chr2 19858176 19858607 -233397976 + L1PA5 LINE L1 5724 6154 0 824 175 28 7 chr2 19859812 19859955 -233396628 + FRAM SINE Alu 1 146 -30 199 192 19 39 chr2 19859973 19860025 -233396558 - L3 LINE CR1 -15 1562 1512 188 181 111 83 chr2 19860103 19860175 -233396408 - L3 LINE CR1 -185 1392 1319 434 237 0 0 chr2 19862256 19862349 -233394234 - MER45A DNA AcHobo 0 178 86 263 329 102 29 chr2 19863013 19863150 -233393433 + MIR3 SINE MIR 55 201 -7 204 257 0 0 chr2 19866907 19866977 -233389606 + (CA)n Simple_repeat Simple_repeat 1 70 0 251 281 44 9 chr2 19868122 19868236 -233388347 + L2 LINE L2 2943 3060 -212 266 242 0 0 chr2 19869546 19869608 -233386975 - MLT1C LTR MaLR 0 390 329 701 172 5 115 chr2 19869631 19869823 -233386760 - MLT1C LTR MaLR -274 193 23 204 327 53 9 chr2 19869882 19869995 -233386588 + MIR3 SINE MIR 66 183 -25 1819 132 186 14 chr2 19870269 19870634 -233385949 - MSTA LTR MaLR 0 428 1 2156 103 0 4 chr2 19871368 19871699 -233384884 - AluSx SINE Alu 0 334 5 200 333 37 0 chr2 19871717 19871798 -233384785 + MIR SINE MIR 18 101 -161 249 224 0 30 chr2 19872692 19872759 -233383824 - MIR SINE MIR -73 135 71 1156 134 71 45 chr2 19872760 19873028 -233383555 - Charlie5 DNA MER1_type -68 2544 2270 1860 147 0 34 chr2 19873115 19873431 -233383152 - AluJb SINE Alu 0 306 1 401 220 30 0 chr2 19873439 19873539 -233383044 - Charlie5 DNA MER1_type -2503 109 7 2204 121 0 0 chr2 19873616 19873913 -233382670 + AluSx SINE Alu 1 297 -15 301 294 87 11 chr2 19874215 19874307 -233382276 - MIR SINE MIR -86 122 24 214 308 168 37 chr2 19874419 19874526 -233382057 + MIR SINE MIR 27 147 -61 1122 217 86 50 chr2 19874527 19874946 -233381637 - MLT1C LTR MaLR 0 467 34 354 278 102 29 chr2 19875378 19875583 -233381000 + L1ME LINE L1 5549 5768 -353 2931 112 90 56 chr2 19878023 19878158 -233378425 + L1MA6 LINE L1 5656 5785 -515 261 0 0 0 chr2 19878158 19878187 -233378396 + (CA)n Simple_repeat Simple_repeat 2 30 0 2931 112 90 56 chr2 19878187 19878675 -233377908 + L1MA6 LINE L1 5785 6300 0 2438 102 0 0 chr2 19880972 19881277 -233375306 + AluSx SINE Alu 1 305 -7 3567 91 91 0 chr2 19882513 19883086 -233373497 - LTR24C LTR ERV1 -1 634 10 200 241 37 19 chr2 19884173 19884227 -233372356 - MIR SINE MIR -119 89 35 750 107 10 0 chr2 19884403 19884506 -233372077 + AluSq/x SINE Alu 1 104 -209 865 191 42 0 chr2 19884661 19884829 -233371754 + AluSg/x SINE Alu 121 295 -17 2301 109 7 0 chr2 19884838 19885141 -233371442 + AluSq SINE Alu 1 305 -8 1744 168 7 0 chr2 19885160 19885440 -233371143 + AluJo SINE Alu 11 292 -20 2435 126 28 14 chr2 19887697 19888055 -233368528 - THE1B LTR MaLR -1 363 1 1973 113 69 36 chr2 19889426 19889789 -233366794 + THE1C LTR MaLR 1 375 0 205 347 27 53 chr2 19890354 19890504 -233366079 + MIR3 SINE MIR 1 146 -62 313 326 244 0 chr2 19894866 19895001 -233361582 + MIR3 SINE MIR 32 199 -9 778 230 63 0 chr2 19895766 19895940 -233360643 - MER5A DNA MER1_type -1 188 4 575 224 158 0 chr2 19895950 19896102 -233360481 - MER5A DNA MER1_type 0 189 14 458 297 61 40 chr2 19896446 19896691 -233359892 + L1ME LINE L1 5265 5509 -612 1647 254 79 10 chr2 19896847 19897453 -233359130 + MER114 LTR ERV 1 648 0 10512 112 25 3 chr2 19897970 19899408 -233357175 - Tigger1 DNA MER2_type 0 2418 941 2758 135 48 25 chr2 19899408 19899883 -233356700 + MER66B LTR ERV1 1 486 0 10512 112 25 3 chr2 19899883 19900032 -233356551 - Tigger1 DNA MER2_type -1477 941 797 784 286 36 18 chr2 19900118 19900506 -233356077 + L1MEc LINE L1 1987 2381 -4015 5737 249 72 15 chr2 19901224 19903285 -233353298 + L1MEc LINE L1 2322 4500 -1715 1117 281 130 52 chr2 19903415 19903653 -233352930 - L2 LINE L2 -4 3309 3091 1853 154 0 24 chr2 19903653 19903945 -233352638 - AluJo SINE Alu -27 285 1 1117 281 130 52 chr2 19903945 19904542 -233352041 - L2 LINE L2 -222 3091 2361 2405 89 0 3 chr2 19904542 19904844 -233351739 + AluY SINE Alu 1 301 -10 1117 281 130 52 chr2 19904844 19904998 -233351585 - L2 LINE L2 -952 2361 2220 276 206 0 16 chr2 19905002 19905065 -233351518 + MER94 DNA DNA 1 62 -72 532 280 148 22 chr2 19905119 19905390 -233351193 - L2 LINE L2 -1081 2233 1929 1825 161 3 7 chr2 19905581 19905873 -233350710 + AluSx SINE Alu 5 295 -17 8088 20 0 0 chr2 19905904 19906870 -233349713 - L1P LINE L1 -1177 4969 4004 7916 19 0 0 chr2 19906870 19907840 -233348743 + L1PA2 LINE L1 5186 6155 0 938 238 50 21 chr2 19907880 19908120 -233348463 - MIR SINE MIR 0 262 16 1993 128 180 11 chr2 19908310 19908676 -233347907 - MSTA LTR MaLR 0 428 1 544 284 103 46 chr2 19908978 19909503 -233347080 - L1ME LINE L1 -302 5819 5265 566 335 80 84 chr2 19910611 19912034 -233344549 + L2 LINE L2 360 1776 -1538 368 240 109 22 chr2 19912294 19912477 -233344106 - L1MC5 LINE L1 -418 7543 7345 1591 210 164 48 chr2 19912477 19913178 -233343405 - L1MC5 LINE L1 -520 7441 6660 1059 297 89 81 chr2 19913184 19914262 -233342321 + L2 LINE L2 1793 2879 -435 388 313 46 8 chr2 19914587 19914718 -233341865 - MIR3 SINE MIR -27 181 46 265 279 29 29 chr2 19915333 19915437 -233341146 - LTR16A1 LTR ERVL -2 455 352 226 214 0 0 chr2 19916183 19916225 -233340358 + L2 LINE L2 3272 3313 0 231 218 23 11 chr2 19916239 19916326 -233340257 + GA-rich Low_complexity Low_complexity 1 88 0 * 493 94 24 12 chr2 19916325 19916410 -233340173 + (GGGAA)n Simple_repeat Simple_repeat 2 87 0 1406 263 44 44 chr2 19916429 19916927 -233339656 - MLT1K LTR MaLR -81 507 10 439 296 74 72 chr2 19917554 19918038 -233338545 + MLT1K LTR MaLR 88 572 -16 256 339 77 23 chr2 19918518 19918648 -233337935 - MIR3 SINE MIR -71 137 1 1612 217 23 45 chr2 19919281 19919751 -233336832 - MLT1C LTR MaLR -7 460 1 580 226 274 5 chr2 19919998 19920210 -233336373 - L2 LINE L2 0 3313 3045 316 239 186 18 chr2 19920328 19920495 -233336088 - L2 LINE L2 -620 2694 2500 2285 101 0 19 chr2 19921317 19921633 -233334950 + AluSg SINE Alu 1 310 0 2119 109 41 22 chr2 19921713 19922081 -233334502 - THE1C LTR MaLR 0 375 1 1300 185 88 69 chr2 19922127 19922560 -233334023 - LTR37B LTR ERV1 -21 447 7 460 91 81 20 chr2 19923810 19923909 -233332674 + L1MB8 LINE L1 6074 6178 0 1512 138 0 5 chr2 19923932 19924149 -233332434 + AluJb SINE Alu 86 301 -11 193 171 98 0 chr2 19925801 19925842 -233330741 + MIR SINE MIR 211 255 -7 562 274 111 0 chr2 19926209 19926443 -233330140 + L1MC4 LINE L1 7783 8042 0 24 0 0 0 chr2 19926506 19926530 -233330053 + AT_rich Low_complexity Low_complexity 1 24 0 238 203 14 29 chr2 19929426 19929495 -233327088 + (TA)n Simple_repeat Simple_repeat 1 68 0 193 125 31 0 chr2 19929722 19929754 -233326829 - MIR SINE MIR -63 145 113 404 220 79 37 chr2 19930473 19930687 -233325896 + L1MC5 LINE L1 7246 7468 -493 365 314 96 29 chr2 19932569 19932849 -233323734 + L1 LINE L1 4721 5019 -1127 1522 110 18 9 chr2 19933140 19933368 -233323215 + AluSq SINE Alu 1 230 -83 869 148 7 0 chr2 19933368 19933503 -233323080 - AluJb SINE Alu -176 136 1 197 386 0 0 chr2 19933521 19933591 -233322992 - L2 LINE L2 -405 2908 2839 546 174 174 0 chr2 19933637 19933827 -233322756 - Charlie4a DNA MER1_type -4 504 282 1420 219 56 23 chr2 19933827 19934170 -233322413 + L1MB2 LINE L1 3100 3465 -2681 2158 108 35 57 chr2 19934170 19934542 -233322041 - THE1B LTR MaLR 0 364 1 1420 219 56 23 chr2 19934542 19934682 -233321901 + L1MB2 LINE L1 3465 3599 -2547 * 3994 186 48 30 chr2 19934670 19934810 -233321773 + L1MB2 LINE L1 4241 4377 -1794 2120 130 3 22 chr2 19934810 19935126 -233321457 + AluSx SINE Alu 1 310 -2 3994 186 48 30 chr2 19935126 19936633 -233319950 + L1MB2 LINE L1 4377 5856 -315 459 0 0 0 chr2 19936633 19936684 -233319899 + (TGG)n Simple_repeat Simple_repeat 1 51 0 3994 186 48 30 chr2 19936684 19936761 -233319822 + L1MB2 LINE L1 5856 5930 -241 846 195 6 18 chr2 19936761 19936925 -233319658 + FRAM SINE Alu 1 162 -4 3994 186 48 30 chr2 19936925 19936982 -233319601 + L1MB2 LINE L1 5930 6170 -1 574 248 141 30 chr2 19937228 19937527 -233319056 + L1M4 LINE L1 3854 4185 -1961 479 251 56 5 chr2 19937585 19937780 -233318803 + L1M4 LINE L1 4656 4860 -1286 486 202 84 0 chr2 19937849 19937968 -233318615 + HAL1b LINE L1 965 1093 -255 2811 206 67 0 chr2 19937987 19938648 -233317935 - L1ME1 LINE L1 -29 6137 5433 1908 125 0 0 chr2 19938716 19938980 -233317603 - AluSg SINE Alu -10 300 37 314 190 99 33 chr2 19938995 19939116 -233317467 + HAL1b LINE L1 965 1093 -255 2510 63 0 13 chr2 19939194 19939509 -233317074 - AluY SINE Alu 0 311 1 1341 36 12 0 chr2 19944673 19944838 -233311745 + L1PA7 LINE L1 5982 6148 -6 22 70 0 0 chr2 19944844 19944887 -233311696 + AT_rich Low_complexity Low_complexity 1 43 0 29 28 0 0 chr2 19945358 19945394 -233311189 + AT_rich Low_complexity Low_complexity 1 36 0 382 77 0 0 chr2 19945545 19945597 -233310986 + L1MA4A LINE L1 5899 5950 -353 593 125 0 0 chr2 19945597 19945685 -233310898 + AluY SINE Alu 212 299 -12 3032 133 30 0 chr2 19945693 19946195 -233310388 + L1PA7 LINE L1 3 519 -5942 19393 111 16 41 chr2 19946297 19947351 -233309232 - L1P3 LINE L1 -2275 4186 3108 2517 80 0 3 chr2 19947351 19947662 -233308921 - AluY SINE Alu -1 310 1 19393 111 16 41 chr2 19947662 19950598 -233305985 - L1P3 LINE L1 -3353 3108 217 26688 81 7 7 chr2 19950698 19952161 -233304422 + L1PA7 LINE L1 1693 3155 -3314 2496 84 0 3 chr2 19952161 19952472 -233304111 + AluY SINE Alu 1 310 -1 26688 81 7 7 chr2 19952472 19955788 -233300795 + L1PA7 LINE L1 3155 6467 -2 3823 96 0 4 chr2 19955809 19956322 -233300261 + MER9 LTR ERVK 1 511 0 20498 70 8 7 chr2 19956322 19957348 -233299235 + HERVK9 LTR ERVK 1 1024 -4892 2395 65 0 0 chr2 19957348 19957639 -233298944 + AluY SINE Alu 1 291 -20 20498 70 8 7 chr2 19957639 19959394 -233297189 + HERVK9 LTR ERVK 1024 2786 -3130 1810 43 0 0 chr2 19959394 19959625 -233296958 + HERVK9 LTR ERVK 3711 3941 -1975 * 7499 80 4 9 chr2 19959624 19960683 -233295900 + HERVK9 LTR ERVK 4582 5634 -282 2167 71 0 0 chr2 19960779 19961061 -233295522 + HERVK9 LTR ERVK 5635 5916 0 3867 76 2 8 chr2 19961061 19961575 -233295008 + MER9 LTR ERVK 1 511 0 459 227 34 102 chr2 19961764 19961873 -233294710 - MIR SINE MIR -1 261 167 2412 77 0 3 chr2 19961873 19962170 -233294413 - AluY SINE Alu -15 296 1 459 227 34 102 chr2 19962170 19962236 -233294347 - MIR SINE MIR -95 167 98 26 0 0 0 chr2 19962307 19962333 -233294250 + AT_rich Low_complexity Low_complexity 1 26 0 347 253 52 71 chr2 19962806 19962960 -233293623 + L1ME4a LINE L1 5959 6109 -12 271 162 54 0 chr2 19963087 19963161 -233293422 + (TA)n Simple_repeat Simple_repeat 2 79 0 828 201 7 13 chr2 19963744 19963898 -233292685 - FRAM SINE Alu -10 156 4 21 0 0 0 chr2 19963905 19963926 -233292657 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 19965883 19965905 -233290678 + AT_rich Low_complexity Low_complexity 1 22 0 450 0 0 0 chr2 19967087 19967137 -233289446 + (CCA)n Simple_repeat Simple_repeat 3 52 0 382 292 104 5 chr2 19967364 19967566 -233289017 - L1ME4a LINE L1 -83 6038 5817 28 79 0 0 chr2 19967566 19967629 -233288954 + AT_rich Low_complexity Low_complexity 1 63 0 328 178 33 33 chr2 19968193 19968283 -233288300 - L1MC5 LINE L1 -181 7780 7691 25 31 0 0 chr2 19968365 19968397 -233288186 + AT_rich Low_complexity Low_complexity 1 32 0 430 224 0 24 chr2 19969454 19969539 -233287044 - L2 LINE L2 0 3313 3231 1519 180 50 44 chr2 19969605 19969967 -233286616 + MLT1A1 LTR MaLR 2 365 0 1100 191 39 14 chr2 19972106 19972388 -233284195 + HAL1b LINE L1 527 815 -533 286 230 201 14 chr2 19972438 19972577 -233284006 + HAL1b LINE L1 895 1059 -289 422 213 91 70 chr2 19972587 19972817 -233283766 + HAL1b LINE L1 1091 1325 -23 210 333 16 0 chr2 19972863 19972926 -233283657 - L2 LINE L2 -8 3264 3201 24 32 0 0 chr2 19973049 19973080 -233283503 + AT_rich Low_complexity Low_complexity 1 31 0 1542 156 10 46 chr2 19973133 19973435 -233283148 + AluJb SINE Alu 1 291 -21 1654 177 54 49 chr2 19973624 19974030 -233282553 + LTR52 LTR ERVL 2 409 -12 342 251 59 148 chr2 19974487 19974758 -233281825 - MIR SINE MIR -14 248 2 516 238 118 48 chr2 19974953 19975268 -233281315 - L1MC5 LINE L1 -20 7941 7605 1885 194 40 40 chr2 19976065 19976534 -233280049 + Charlie7 DNA MER1_type 266 734 -1878 318 186 150 0 chr2 19976543 19976656 -233279927 + Charlie7 DNA MER1_type 2440 2569 -43 646 208 16 0 chr2 19981036 19981161 -233275422 - FLAM_A SINE Alu -6 127 1 25 51 0 0 chr2 19981168 19981207 -233275376 + AT_rich Low_complexity Low_complexity 1 39 0 364 231 105 91 chr2 19981371 19981514 -233275069 - L2 LINE L2 0 3313 3169 903 180 6 6 chr2 19981688 19981855 -233274728 + L1MD2 LINE L1 5834 6000 -359 1074 96 0 0 chr2 19981856 19982002 -233274581 + AluSg/x SINE Alu 165 310 -2 609 234 106 51 chr2 19982020 19982255 -233274328 + L1MD2 LINE L1 6112 6359 0 765 337 139 47 chr2 19982372 19982538 -233274045 - L2 LINE L2 -541 2773 2624 1051 205 0 28 chr2 19982538 19982753 -233273830 - MER3 DNA MER1_type 0 209 1 765 337 139 47 chr2 19982753 19983579 -233273004 - L2 LINE L2 -690 2624 1690 285 299 46 11 chr2 19983657 19983744 -233272839 + L2 LINE L2 3174 3263 -9 289 375 56 7 chr2 19983791 19983962 -233272621 + MIR SINE MIR 16 192 -58 1395 135 4 18 chr2 19985077 19985306 -233271277 - L1PB4 LINE L1 -5 6151 5926 300 227 383 0 chr2 19985307 19985435 -233271148 + MIR SINE MIR 85 261 -1 184 316 92 13 chr2 19985436 19985512 -233271071 - MIR SINE MIR -106 156 75 1195 0 0 0 chr2 19985842 19985975 -233270608 - AluYa5/8 SINE Alu -5 306 174 24 77 0 0 chr2 19986722 19986774 -233269809 + AT_rich Low_complexity Low_complexity 1 52 0 287 268 14 0 chr2 19987073 19987144 -233269439 - MIR3 SINE MIR -4 204 133 2706 152 41 10 chr2 19987221 19987992 -233268591 + L1M4 LINE L1 4976 5777 -407 2080 87 4 4 chr2 19988035 19988310 -233268273 - AluSc SINE Alu -34 275 1 340 303 0 0 chr2 19988502 19988591 -233267992 - MIR SINE MIR -94 168 80 573 258 94 82 chr2 19989443 19989676 -233266907 + MIR SINE MIR 12 247 -15 2493 30 10 0 chr2 19989679 19989977 -233266606 - AluY SINE Alu -10 301 1 825 223 135 9 chr2 19989995 19990210 -233266373 - MIR SINE MIR -9 253 12 2167 115 0 0 chr2 19990615 19990911 -233265672 - AluSx SINE Alu -16 296 1 229 328 148 39 chr2 19991301 19991429 -233265154 + L2 LINE L2 2917 3058 -214 253 292 0 0 chr2 19991450 19991515 -233265068 + L2 LINE L2 3248 3312 -1 269 294 29 0 chr2 19991573 19991641 -233264942 + L2 LINE L2 3203 3272 0 402 231 211 14 chr2 19991678 19991825 -233264758 - L2 LINE L2 -1 3271 3096 192 179 0 0 chr2 19992522 19992561 -233264022 + (TA)n Simple_repeat Simple_repeat 2 40 0 486 269 23 0 chr2 19993375 19993505 -233263078 + MER94 DNA DNA 1 133 -1 8922 105 8 7 chr2 19993966 19995266 -233261317 + HSMAR2 DNA Mariner 1 1301 -1 288 131 16 16 chr2 19995729 19995790 -233260793 + L1MA2 LINE L1 6244 6304 0 25 83 0 0 chr2 19995811 19995871 -233260712 + AT_rich Low_complexity Low_complexity 1 60 0 5144 227 120 74 chr2 19995939 19996780 -233259803 - HAL1 LINE L1 0 2507 1705 1949 95 4 0 chr2 19996780 19997073 -233259510 - AluSx SINE Alu 0 323 30 5144 227 120 74 chr2 19997073 19997430 -233259153 - HAL1 LINE L1 -802 1705 1366 1955 115 0 0 chr2 19997430 19997708 -233258875 - AluSx SINE Alu 0 312 35 5144 227 120 74 chr2 19997708 19997990 -233258593 - HAL1 LINE L1 -1141 1366 1098 2148 103 10 0 chr2 19997990 19998281 -233258302 - AluSx SINE Alu -18 294 1 5144 227 120 74 chr2 19998281 19999188 -233257395 - HAL1 LINE L1 -1409 1098 9 259 321 61 36 chr2 20000380 20000545 -233256038 - HAL1 LINE L1 -1 2506 2338 52 41 0 0 chr2 20000609 20000682 -233255901 + AT_rich Low_complexity Low_complexity 1 73 0 3158 162 131 111 chr2 20000762 20001357 -233255226 - L1MC3 LINE L1 -1 7784 7069 249 215 86 65 chr2 20001357 20001450 -233255133 - MLT1F1 LTR MaLR -442 125 31 3158 162 131 111 chr2 20001450 20001763 -233254820 - L1MC3 LINE L1 -716 7069 6764 1428 241 116 19 chr2 20001889 20002354 -233254229 + LTR33 LTR ERVL 1 510 -11 2441 67 0 0 chr2 20002806 20003104 -233253479 - AluY SINE Alu -13 298 1 525 194 91 24 chr2 20003179 20003344 -233253239 - MER104 DNA MER2_type -1 179 4 35 41 0 0 chr2 20004067 20004116 -233252467 + AT_rich Low_complexity Low_complexity 1 49 0 1205 224 142 17 chr2 20004307 20004659 -233251924 + MSTD LTR MaLR 1 396 0 418 298 92 9 chr2 20004882 20005100 -233251483 - MIR SINE MIR -6 256 21 26 30 0 0 chr2 20005764 20005797 -233250786 + AT_rich Low_complexity Low_complexity 1 33 0 26 0 0 0 chr2 20006033 20006059 -233250524 + AT_rich Low_complexity Low_complexity 1 26 0 32 57 0 0 chr2 20006411 20006464 -233250119 + AT_rich Low_complexity Low_complexity 1 53 0 1832 141 35 0 chr2 20006883 20007167 -233249416 + AluJb SINE Alu 1 294 -18 2233 98 3 0 chr2 20007186 20007491 -233249092 + AluY SINE Alu 1 306 -5 193 315 141 34 chr2 20007808 20007957 -233248626 + MIR SINE MIR 55 219 -43 22 35 0 0 chr2 20008411 20008440 -233248143 + AT_rich Low_complexity Low_complexity 1 29 0 232 186 23 0 chr2 20008838 20008881 -233247702 - L2 LINE L2 0 3313 3270 1039 320 107 85 chr2 20008904 20009478 -233247105 + L2 LINE L2 1314 1874 -1398 656 137 0 17 chr2 20009478 20009595 -233246988 + L1PB4 LINE L1 6041 6155 -1 565 123 0 0 chr2 20009602 20009683 -233246900 + MLT1B LTR MaLR 260 340 -50 1039 320 107 85 chr2 20009683 20009879 -233246704 + L2 LINE L2 1879 2069 -1203 1714 177 0 39 chr2 20009879 20010189 -233246394 - AluJo SINE Alu -14 298 1 1039 320 107 85 chr2 20010189 20011234 -233245349 + L2 LINE L2 2069 3271 -1 336 24 0 0 chr2 20011237 20011278 -233245305 + (CA)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr2 20011295 20011327 -233245256 + AT_rich Low_complexity Low_complexity 1 32 0 233 98 24 0 chr2 20012175 20012216 -233244367 + (TTTC)n Simple_repeat Simple_repeat 4 45 0 306 0 0 0 chr2 20012830 20012864 -233243719 + (CA)n Simple_repeat Simple_repeat 2 35 0 419 309 32 0 chr2 20013248 20013371 -233243212 - L2 LINE L2 0 3272 3146 1030 139 58 97 chr2 20014348 20014580 -233242003 - L1MC4 LINE L1 -190 7852 7629 1709 188 0 3 chr2 20014580 20014873 -233241710 - AluJo SINE Alu -18 294 3 1030 139 58 97 chr2 20014873 20014899 -233241684 - L1MC4 LINE L1 -413 7629 7604 2045 135 77 0 chr2 20015068 20015408 -233241175 + MER47A DNA MER2_type 1 366 0 810 343 34 66 chr2 20015986 20016528 -233240055 - L2 LINE L2 0 3272 2734 402 21 0 0 chr2 20017059 20017106 -233239477 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr2 20018637 20018657 -233237926 + (A)n Simple_repeat Simple_repeat 1 20 0 2224 102 0 40 chr2 20018658 20018982 -233237601 + AluSx SINE Alu 1 311 -1 940 287 200 35 chr2 20018987 20019673 -233236910 - L2 LINE L2 -622 2692 1894 825 272 59 25 chr2 20019867 20020191 -233236392 + L1ME4a LINE L1 5539 5873 -248 197 300 38 38 chr2 20020219 20020299 -233236284 + L2 LINE L2 3234 3313 0 2480 75 0 3 chr2 20020598 20020903 -233235680 + AluY SINE Alu 1 304 -7 219 229 0 0 chr2 20020927 20020988 -233235595 + (TA)n Simple_repeat Simple_repeat 2 62 0 550 263 175 18 chr2 20021120 20021337 -233235246 + MIR SINE MIR 9 259 -3 529 256 167 0 chr2 20021362 20021518 -233235065 + MER5A DNA MER1_type 2 183 -6 239 310 21 84 chr2 20021523 20021665 -233234918 - MIR SINE MIR -26 182 49 404 64 0 0 chr2 20025317 20025364 -233231219 + Alu SINE Alu 17 63 -255 584 273 142 14 chr2 20026518 20026793 -233229790 - Charlie2 DNA MER1_type -2471 311 2 297 202 30 40 chr2 20027661 20027760 -233228823 + L1MC5 LINE L1 7832 7929 -32 1956 152 0 10 chr2 20027851 20028160 -233228423 + AluJo SINE Alu 1 306 -6 2233 125 0 0 chr2 20028215 20028527 -233228056 + AluSx SINE Alu 1 312 0 702 153 129 6 chr2 20029274 20029385 -233227198 + L1MB3 LINE L1 4385 4524 -1622 186 71 0 0 chr2 20029385 20029413 -233227170 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 702 153 129 6 chr2 20029413 20029464 -233227119 + L1MB3 LINE L1 4524 4567 -1579 250 196 289 0 chr2 20029462 20029559 -233227024 + L1MB3 LINE L1 5382 5506 -656 * 1294 142 33 0 chr2 20029721 20029932 -233226651 + L1MB3 LINE L1 5966 6183 0 186 200 133 76 chr2 20029978 20030083 -233226500 - L2 LINE L2 -479 2835 2725 219 69 0 0 chr2 20030808 20030837 -233225746 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 30 chr2 20031501 20031518 -233225065 + AT_rich Low_complexity Low_complexity 1 18 -14 1987 155 3 3 chr2 20031518 20031821 -233224762 + AluJb SINE Alu 1 303 -9 22 0 0 30 chr2 20031821 20031836 -233224747 + AT_rich Low_complexity Low_complexity 18 32 0 481 175 117 33 chr2 20031902 20032022 -233224561 + MIR SINE MIR 1 130 -132 201 333 16 0 chr2 20032045 20032108 -233224475 + L2 LINE L2 3233 3296 -17 216 0 0 0 chr2 20032671 20032695 -233223888 + (A)n Simple_repeat Simple_repeat 1 24 0 201 261 148 23 chr2 20033953 20034041 -233222542 - MIR3 SINE MIR 0 208 110 2648 183 71 23 chr2 20034143 20034718 -233221865 - L1MC4a LINE L1 0 7808 7206 279 0 0 0 chr2 20035206 20035237 -233221346 + (CA)n Simple_repeat Simple_repeat 2 32 0 330 326 118 0 chr2 20035251 20035395 -233221188 + MIR3 SINE MIR 19 179 -29 1364 197 42 28 chr2 20035662 20035946 -233220637 - AluJo SINE Alu -24 288 1 223 244 0 0 chr2 20038620 20038661 -233217922 + (CACG)n Simple_repeat Simple_repeat 3 43 0 2368 71 31 0 chr2 20039973 20040267 -233216316 + AluY SINE Alu 1 303 -8 2294 82 0 3 chr2 20040285 20040576 -233216007 + AluSq SINE Alu 3 292 -21 239 296 93 28 chr2 20040716 20040824 -233215759 - L2 LINE L2 0 3313 3199 2229 120 0 0 chr2 20041001 20041300 -233215283 - AluSx SINE Alu -13 299 1 403 209 180 22 chr2 20041673 20041816 -233214767 - MIR SINE MIR -64 144 25 1856 156 3 13 chr2 20041982 20042284 -233214299 + AluJo SINE Alu 3 301 -11 2981 67 0 0 chr2 20042330 20042686 -233213897 + L1PA8 LINE L1 5806 6161 -11 2391 132 25 35 chr2 20042702 20043105 -233213478 + MER4E LTR ERV1 340 738 -28 2119 194 72 33 chr2 20043404 20043889 -233212694 + MLT1D LTR MaLR 1 504 -1 232 250 130 22 chr2 20045215 20045307 -233211276 + MIR SINE MIR 30 131 -77 25 0 0 0 chr2 20045637 20045662 -233210921 + GC_rich Low_complexity Low_complexity 1 25 0 24 32 0 0 chr2 20045732 20045763 -233210820 + GC_rich Low_complexity Low_complexity 1 31 0 244 353 108 24 chr2 20046440 20046607 -233209976 - L2 LINE L2 -100 3172 2992 2039 171 28 7 chr2 20046691 20047096 -233209487 + L1MB3 LINE L1 5681 6087 -64 471 246 11 94 chr2 20047217 20047272 -233209311 + LTR67 LTR ERVL 2 60 -497 3228 143 11 46 chr2 20047272 20047811 -233208772 - MLT2B1 LTR ERVL 0 520 1 471 246 11 94 chr2 20047811 20047946 -233208637 + LTR67 LTR ERVL 60 176 -381 445 285 28 28 chr2 20047942 20048086 -233208497 + LTR67 LTR ERVL 337 480 -77 * 414 218 135 53 chr2 20048086 20048256 -233208327 + MER91B DNA MER1_type 2 185 -5 1757 167 0 61 chr2 20048281 20048611 -233207972 - AluJo SINE Alu -2 310 1 21 0 0 0 chr2 20049230 20049251 -233207332 + AT_rich Low_complexity Low_complexity 1 21 0 285 257 316 27 chr2 20049440 20049627 -233206956 - MLT1J LTR MaLR -172 339 99 30 0 0 0 chr2 20050222 20050252 -233206331 + AT_rich Low_complexity Low_complexity 1 30 0 1790 157 21 11 chr2 20050255 20050536 -233206047 + AluJo SINE Alu 1 284 -28 337 241 25 135 chr2 20051042 20051142 -233205441 + MER112 DNA MER1_type 8 67 -193 2009 103 3 51 chr2 20051142 20051453 -233205130 - AluY SINE Alu -15 296 1 337 241 25 135 chr2 20051453 20051597 -233204986 + MER112 DNA MER1_type 67 225 -35 190 333 0 15 chr2 20051740 20051806 -233204777 + L2 LINE L2 3188 3252 -61 894 259 92 14 chr2 20052296 20052590 -233203993 - MLT1I LTR MaLR -2 407 91 311 246 48 24 chr2 20053238 20053364 -233203219 - MER5A DNA MER1_type 0 189 61 2582 124 22 0 chr2 20053369 20053725 -233202858 - THE1B LTR MaLR 0 364 1 11415 110 7 33 chr2 20053725 20055346 -233201237 - THE1B-int LTR MaLR 0 1580 2 2562 124 22 0 chr2 20055366 20055722 -233200861 - THE1B LTR MaLR 0 364 1 910 265 152 7 chr2 20056307 20056741 -233199842 - L1ME4a LINE L1 -1 6120 5624 211 368 60 40 chr2 20056778 20057080 -233199503 + L2 LINE L2 2179 2486 -828 1402 256 30 57 chr2 20057205 20057602 -233198981 + L1MEc LINE L1 1262 1641 -4755 2077 88 0 0 chr2 20057602 20057862 -233198721 - AluSg SINE Alu -16 294 35 1402 256 30 57 chr2 20057862 20058027 -233198556 + L1MEc LINE L1 1641 1809 -4587 855 243 28 0 chr2 20058056 20058237 -233198346 + AluJo SINE Alu 115 300 -12 2116 183 34 105 chr2 20058405 20058796 -233197787 + MER44D DNA MER2_type 4 396 -2091 8083 29 5 0 chr2 20058796 20060140 -233196443 + L1PA3 LINE L1 4808 6155 0 2116 183 34 105 chr2 20060140 20060337 -233196246 + MER44D DNA MER2_type 396 605 0 319 335 26 42 chr2 20060500 20060691 -233195892 - MIR SINE MIR -64 198 11 1228 135 96 0 chr2 20061324 20061532 -233195051 - L1PA15-16 LINE L1 -4222 2627 2400 940 138 0 0 chr2 20061532 20061662 -233194921 - AluSq/x SINE Alu -183 130 1 8531 160 45 33 chr2 20061665 20063223 -233193360 + L1PA15 LINE L1 3473 5011 -1154 2490 121 81 8 chr2 20063223 20063620 -233192963 - MSTA LTR MaLR -2 426 1 8531 160 45 33 chr2 20063620 20063920 -233192663 + L1PA15 LINE L1 5011 5306 -859 203 0 37 0 chr2 20063920 20063947 -233192636 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8531 160 45 33 chr2 20063947 20063965 -233192618 + L1PA15 LINE L1 5306 5322 -843 2221 116 0 3 chr2 20063965 20064267 -233192316 + AluSx SINE Alu 1 301 -11 8531 160 45 33 chr2 20064267 20065067 -233191516 + L1PA15 LINE L1 5322 6165 0 1989 173 9 9 chr2 20065214 20065549 -233191034 + MER2 DNA MER2_type 1 335 -10 192 271 51 0 chr2 20068649 20068708 -233187875 - L2 LINE L2 -4 3309 3248 290 279 13 0 chr2 20069522 20069601 -233186982 + L2 LINE L2 3193 3272 0 26 0 0 0 chr2 20070723 20070749 -233185834 + AT_rich Low_complexity Low_complexity 1 26 0 1814 126 4 0 chr2 20071460 20071707 -233184876 - AluSx SINE Alu -12 300 53 682 229 0 0 chr2 20071734 20071856 -233184727 + FLAM_C SINE Alu 5 126 -17 2127 123 14 0 chr2 20071958 20072250 -233184333 - AluSx SINE Alu -15 297 2 1153 213 161 0 chr2 20072506 20072755 -233183828 + AluJo SINE Alu 1 289 -13 21 36 0 0 chr2 20072756 20072784 -233183799 + AT_rich Low_complexity Low_complexity 1 28 0 2177 84 38 3 chr2 20072808 20073095 -233183488 + AluSp SINE Alu 1 297 -16 788 203 0 0 chr2 20073095 20073233 -233183350 - MLT1A1 LTR MaLR -227 138 1 1636 190 64 0 chr2 20073548 20073875 -233182708 + MER7A DNA MER2_type 1 346 0 30 45 0 0 chr2 20074216 20074260 -233182323 + AT_rich Low_complexity Low_complexity 1 44 0 180 344 21 10 chr2 20074364 20074460 -233182123 - L3 LINE CR1 -5 1572 1476 279 79 0 0 chr2 20074552 20074590 -233181993 + (TG)n Simple_repeat Simple_repeat 1 38 0 1788 154 4 4 chr2 20074592 20074871 -233181712 - AluSx SINE Alu -33 279 1 453 320 190 23 chr2 20074898 20075168 -233181415 - L3 LINE CR1 -291 1286 1062 843 174 0 0 chr2 20075168 20075300 -233181283 - FLAM_C SINE Alu -1 132 1 453 320 190 23 chr2 20075300 20075604 -233180979 - L3 LINE CR1 -515 1062 616 187 352 71 36 chr2 20075674 20075927 -233180656 - L3 LINE CR1 -1131 446 185 1002 81 0 0 chr2 20075988 20076112 -233180471 - AluSg/x SINE Alu -25 287 164 960 136 0 0 chr2 20076113 20076245 -233180338 - AluSg/x SINE Alu -17 295 164 2205 116 3 3 chr2 20076247 20076549 -233180034 - AluSx SINE Alu -10 302 1 428 303 81 11 chr2 20076739 20076924 -233179659 - MIR SINE MIR -6 256 59 554 156 73 18 chr2 20077533 20077642 -233178941 + FLAM_A SINE Alu 17 131 -11 840 153 0 0 chr2 20077953 20078077 -233178506 - FLAM_C SINE Alu -18 125 2 898 161 87 0 chr2 20078354 20078515 -233178068 + FAM SINE Alu 1 175 0 2774 45 0 23 chr2 20079043 20079396 -233177187 + L1PA6 LINE L1 5808 6152 -2 904 152 0 36 chr2 20079530 20079695 -233176888 - AluJb SINE Alu -21 291 133 575 112 49 0 chr2 20079695 20079838 -233176745 + (TA)n Simple_repeat Simple_repeat 2 151 0 802 99 54 0 chr2 20079841 20079952 -233176631 - AluJb SINE Alu -187 125 9 2329 93 3 3 chr2 20080142 20080443 -233176140 + AluSc SINE Alu 1 301 -8 2825 19 0 0 chr2 20080443 20080751 -233175832 + AluYb8 SINE Alu 1 308 -10 334 225 19 2 chr2 20080797 20080897 -233175686 + L1MC5 LINE L1 7832 8041 -1 220 234 78 0 chr2 20080927 20080991 -233175592 - L2 LINE L2 -307 2965 2897 218 307 53 18 chr2 20082814 20082928 -233173655 - L2 LINE L2 -1903 1411 1294 707 196 68 41 chr2 20085551 20085770 -233170813 + LTR37A LTR ERV1 200 424 -2 227 279 16 0 chr2 20085907 20085968 -233170615 + L2 LINE L2 3160 3221 -92 294 268 198 6 chr2 20086144 20086301 -233170282 - MIR SINE MIR -25 237 51 612 216 12 54 chr2 20086309 20086476 -233170107 - MER5B DNA MER1_type 0 178 19 2571 68 0 3 chr2 20086560 20086867 -233169716 + AluSp SINE Alu 1 306 -7 1891 136 22 44 chr2 20087023 20087340 -233169243 + LTR32 LTR ERVL 22 331 -140 753 163 6 84 chr2 20087441 20087607 -233168976 + LTR32 LTR ERVL 319 471 0 251 281 98 34 chr2 20088057 20088292 -233168291 + L2 LINE L2 1917 2166 -1148 652 103 0 0 chr2 20088330 20088417 -233168166 - MSTA LTR MaLR 0 428 342 1752 169 23 7 chr2 20088444 20088745 -233167838 + AluSx SINE Alu 1 306 -6 2470 241 97 21 chr2 20088793 20089880 -233166703 + HAL1 LINE L1 673 1881 -626 1311 246 80 44 chr2 20089925 20090514 -233166069 + HAL1 LINE L1 1690 2299 -208 4139 135 19 56 chr2 20090516 20091287 -233165296 + L1MA5 LINE L1 5558 6300 0 352 196 21 0 chr2 20091307 20091381 -233165202 + AluJ/FLAM SINE Alu 2 63 -239 * 4306 163 30 57 chr2 20091375 20092409 -233164174 + Charlie1 DNA MER1_type 1755 2760 -1 846 136 0 0 chr2 20092568 20092686 -233163897 - FLAM_C SINE Alu -25 118 1 2148 156 40 3 chr2 20092713 20093059 -233163524 - MLT1A1 LTR MaLR -6 359 1 206 238 0 0 chr2 20093132 20093174 -233163409 + MIR SINE MIR 108 149 -113 705 239 48 0 chr2 20093922 20094089 -233162494 - MLT1C LTR MaLR 0 467 293 2479 90 8 8 chr2 20094106 20094460 -233162123 - L1PA11 LINE L1 0 6174 5821 361 228 51 0 chr2 20094738 20094817 -233161766 - MLT1A1 LTR MaLR 0 365 283 255 125 0 0 chr2 20096159 20096199 -233160384 + (A)n Simple_repeat Simple_repeat 1 40 0 2284 92 89 15 chr2 20096240 20096578 -233160005 + THE1B LTR MaLR 2 364 0 528 16 0 0 chr2 20097013 20097074 -233159509 + (TATG)n Simple_repeat Simple_repeat 2 62 0 836 72 0 0 chr2 20097074 20097171 -233159412 - AluSc SINE Alu -27 282 186 429 292 20 55 chr2 20097208 20097410 -233159173 + MIR3 SINE MIR 4 198 -10 958 236 71 63 chr2 20097835 20098229 -233158354 + MLT2C1 LTR ERVL 1 397 0 2875 220 70 16 chr2 20100009 20100683 -233155900 - L1ME1 LINE L1 -5 6161 5444 2610 91 89 5 chr2 20100683 20101078 -233155505 + MSTA LTR MaLR 1 428 0 2875 220 70 16 chr2 20101078 20101135 -233155448 - L1ME1 LINE L1 -722 5444 5391 407 172 141 10 chr2 20101244 20101343 -233155240 + L1MC4a LINE L1 5669 5780 -2028 1347 213 60 81 chr2 20101345 20101814 -233154769 - MLT2C2 LTR ERVL 0 464 6 2379 106 0 0 chr2 20101819 20102122 -233154461 + AluSc SINE Alu 1 303 -6 2030 128 0 3 chr2 20102129 20102453 -233154130 + AluSg SINE Alu 1 323 0 324 209 29 101 chr2 20102467 20102507 -233154076 + L1MC4a LINE L1 5791 5832 -1976 2288 102 3 0 chr2 20102507 20102801 -233153782 + AluSx SINE Alu 2 296 -16 324 209 29 101 chr2 20102801 20102899 -233153684 + L1MC4a LINE L1 5832 5919 -1889 22 0 0 0 chr2 20102899 20102921 -233153662 + AT_rich Low_complexity Low_complexity 1 22 0 2918 116 24 0 chr2 20102921 20103344 -233153239 - MER7C DNA MER2_type 0 602 170 985 72 14 29 chr2 20103344 20103483 -233153100 - MER1B DNA MER1_type 0 339 203 1528 143 0 0 chr2 20103516 20103732 -233152851 - MER1B DNA MER1_type -81 216 1 760 193 93 0 chr2 20103732 20103882 -233152701 - MER7C DNA MER2_type -425 177 14 2020 108 0 94 chr2 20103942 20104284 -233152299 + AluSg SINE Alu 1 310 0 1818 163 10 27 chr2 20105765 20106065 -233150518 + AluJo SINE Alu 1 295 -17 390 239 91 34 chr2 20106267 20106476 -233150107 + L2 LINE L2 2435 2655 -659 378 185 23 123 chr2 20106865 20106995 -233149588 + LTR4 LTR ERV1 1 117 -479 661 251 14 28 chr2 20107275 20107490 -233149093 + LTR4 LTR ERV1 385 596 0 588 263 0 0 chr2 20107765 20107879 -233148704 + MER81 DNA DNA 1 114 0 365 250 46 61 chr2 20108808 20108972 -233147611 + L1M4 LINE L1 2197 2350 -3796 1902 162 0 3 chr2 20108972 20109262 -233147321 - AluJo SINE Alu -23 289 1 365 250 46 61 chr2 20109262 20109391 -233147192 + L1M4 LINE L1 2350 2479 -3667 2291 225 50 16 chr2 20110485 20110987 -233145596 + LTR40a LTR ERVL 1 519 0 182 277 0 0 chr2 20111058 20111105 -233145478 + L2 LINE L2 3214 3260 -12 192 256 144 40 chr2 20113875 20114000 -233142583 - MIR SINE MIR -56 206 69 275 183 140 85 chr2 20114414 20114477 -233142106 - LTR33 LTR ERVL -53 468 410 665 137 9 142 chr2 20114477 20114625 -233141958 + MER53 DNA DNA 4 117 -72 2409 85 0 3 chr2 20114625 20114920 -233141663 + AluSp SINE Alu 1 294 -19 665 137 9 142 chr2 20114920 20114983 -233141600 + MER53 DNA DNA 117 187 -2 275 183 140 85 chr2 20114983 20115083 -233141500 - LTR33 LTR ERVL -111 410 296 776 215 112 18 chr2 20115227 20115484 -233141099 + MSTD LTR MaLR 1 339 -57 726 132 0 0 chr2 20115489 20115595 -233140988 - AluSg/x SINE Alu -1 311 206 2594 108 58 23 chr2 20115595 20116030 -233140553 + LTR7 LTR ERV1 1 450 0 11029 110 8 14 chr2 20116052 20119340 -233137243 + HERVH LTR ERV1 4 3736 -3977 6317 126 25 4 chr2 20119333 20120336 -233136247 + HERVH LTR ERV1 3962 4992 -2287 * 2617 90 34 15 chr2 20120315 20120725 -233135858 + HERVH LTR ERV1 7296 7713 0 * 2360 113 55 25 chr2 20120725 20121160 -233135423 + LTR7 LTR ERV1 1 448 -2 1492 130 5 0 chr2 20121162 20121370 -233135213 - AluSq SINE Alu -104 209 1 446 116 0 0 chr2 20121371 20121440 -233135143 + MSTD LTR MaLR 328 396 0 241 237 172 43 chr2 20121440 20121533 -233135050 - LTR33 LTR ERVL -416 105 1 263 386 18 0 chr2 20121803 20121917 -233134666 - MIR3 SINE MIR -9 199 84 2169 120 47 3 chr2 20122634 20122993 -233133590 + LTR8A LTR ERV1 1 375 -352 23 0 0 0 chr2 20123588 20123611 -233132972 + AT_rich Low_complexity Low_complexity 1 23 0 309 141 13 26 chr2 20124028 20124106 -233132477 + GA-rich Low_complexity Low_complexity 4 80 0 235 263 62 94 chr2 20125305 20125465 -233131118 + MER91A DNA MER1_type 40 194 -2 248 297 40 0 chr2 20126251 20126325 -233130258 + MLT1L LTR MaLR 114 190 -425 180 374 10 10 chr2 20127514 20127613 -233128970 - L2 LINE L2 -206 3066 2968 1075 271 61 44 chr2 20127836 20128312 -233128271 - HAL1 LINE L1 -135 2372 1889 1973 193 92 22 chr2 20128323 20128831 -233127752 - HAL1 LINE L1 -693 1814 1271 278 300 56 0 chr2 20129198 20129288 -233127295 + MIR3 SINE MIR 113 207 -1 1794 179 0 3 chr2 20129846 20130131 -233126452 + AluJo SINE Alu 1 284 -28 2666 51 0 3 chr2 20130230 20130542 -233126041 + AluY SINE Alu 1 311 0 1133 191 106 34 chr2 20131584 20131726 -233124857 - Charlie1b DNA MER1_type -2272 489 359 2201 103 12 38 chr2 20131726 20132045 -233124538 - AluSx SINE Alu -1 311 1 1133 191 106 34 chr2 20132045 20132280 -233124303 - Charlie1b DNA MER1_type -2402 359 85 296 272 33 33 chr2 20132320 20132412 -233124171 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 20132437 20132755 -233123828 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 20132845 20132875 -233123708 + (T)n Simple_repeat Simple_repeat 1 30 0 758 215 112 18 chr2 20133664 20133921 -233122662 + MSTD LTR MaLR 1 339 -57 1941 135 16 38 chr2 20133926 20134244 -233122339 - AluSx SINE Alu -1 311 1 903 185 86 22 chr2 20134247 20134479 -233122104 - Charlie1b DNA MER1_type -192 331 85 296 272 33 33 chr2 20134519 20134611 -233121972 - Charlie1b DNA MER1_type -431 92 1 2457 79 0 31 chr2 20134636 20134954 -233121629 + AluSq SINE Alu 4 311 -2 270 0 0 0 chr2 20135044 20135074 -233121509 + (T)n Simple_repeat Simple_repeat 1 30 0 388 259 118 18 chr2 20135777 20135947 -233120636 + MIR SINE MIR 28 214 -48 219 222 51 86 chr2 20135947 20136064 -233120519 + MIR SINE MIR 26 138 -70 * 1071 264 49 30 chr2 20136038 20136634 -233119949 + L2 LINE L2 2518 3124 -189 302 306 35 0 chr2 20136684 20136769 -233119814 + MIR3 SINE MIR 114 201 -7 269 264 56 0 chr2 20137052 20137124 -233119459 + Charlie1 DNA MER1_type 1 76 -2685 184 302 146 0 chr2 20137141 20137237 -233119346 + L2 LINE L2 2596 2705 -609 374 153 133 0 chr2 20137349 20137447 -233119136 - MER65A LTR ERV1 0 445 335 * 482 206 9 0 chr2 20137419 20137526 -233119057 + MER65A LTR ERV1 338 445 0 1486 127 6 106 chr2 20137543 20137605 -233118978 - MER65A LTR ERV1 -154 291 224 1790 155 49 11 chr2 20137605 20137889 -233118694 + AluJo SINE Alu 1 295 -17 818 54 18 0 chr2 20137889 20138000 -233118583 + (GGAGAA)n Simple_repeat Simple_repeat 3 115 0 1486 127 6 106 chr2 20138000 20138258 -233118325 - MER65A LTR ERV1 -219 226 2 4106 190 69 1 chr2 20138259 20139129 -233117454 - MER65A-int LTR ERV1 0 4871 3943 2249 113 7 0 chr2 20139324 20139624 -233116959 - AluSx SINE Alu -10 302 1 180 304 98 22 chr2 20139721 20139813 -233116770 + MIR SINE MIR 64 162 -100 2955 126 310 11 chr2 20141227 20141863 -233114720 - LTR12 LTR ERV1 0 826 1 702 173 48 129 chr2 20142045 20142316 -233114267 - pTR5 LTR ERV1 -1447 991 743 2219 114 0 3 chr2 20142408 20142714 -233113869 + AluY SINE Alu 1 305 -6 1849 150 40 7 chr2 20143282 20143582 -233113001 + AluJb SINE Alu 1 310 -2 2341 87 0 37 chr2 20143588 20143909 -233112674 + AluY SINE Alu 1 309 -2 1063 259 17 4 chr2 20144470 20144702 -233111881 + MIR SINE MIR 28 262 0 334 357 30 6 chr2 20144792 20144960 -233111623 - MIR SINE MIR -62 200 29 2274 82 3 54 chr2 20145084 20145401 -233111182 - AluSg SINE Alu -9 301 1 1509 233 159 30 chr2 20145561 20146088 -233110495 - MLT1G1 LTR MaLR 0 595 1 358 203 203 63 chr2 20147387 20147453 -233109130 - MIR SINE MIR 0 262 207 2202 110 0 0 chr2 20147453 20147761 -233108822 - AluSq SINE Alu 0 308 1 358 203 203 63 chr2 20147761 20147836 -233108747 - MIR SINE MIR -55 207 100 601 157 28 0 chr2 20148352 20148460 -233108123 + MIR SINE MIR 41 151 -111 213 241 69 17 chr2 20149129 20149187 -233107396 - MIR SINE MIR -70 192 132 215 191 24 0 chr2 20151737 20151779 -233104804 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 707 225 16 0 chr2 20151781 20152035 -233104548 + (CATA)n Simple_repeat Simple_repeat 1 258 0 261 140 0 35 chr2 20152035 20152092 -233104491 - MER4-int LTR ERV1 -5433 1165 1111 267 244 0 0 chr2 20152092 20152170 -233104413 + (CA)n Simple_repeat Simple_repeat 2 79 0 1627 170 89 23 chr2 20152271 20152618 -233103965 + MLT1B LTR MaLR 1 370 -20 245 172 0 65 chr2 20153070 20153163 -233103420 + GA-rich Low_complexity Low_complexity 2 88 0 460 160 0 93 chr2 20153179 20153373 -233103210 + GA-rich Low_complexity Low_complexity 3 178 0 245 284 66 112 chr2 20154539 20154709 -233101874 + L2 LINE L2 1553 1729 -1585 2277 95 3 3 chr2 20154709 20154994 -233101589 + AluSx SINE Alu 1 285 -27 300 111 0 0 chr2 20154994 20155039 -233101544 + (CA)n Simple_repeat Simple_repeat 2 46 0 245 284 66 112 chr2 20155039 20155215 -233101368 + L2 LINE L2 1727 1884 -1430 1566 165 39 11 chr2 20155220 20155467 -233101116 + AluJo SINE Alu 30 286 -26 672 77 0 0 chr2 20155467 20155558 -233101025 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 1566 165 39 11 chr2 20155558 20155570 -233101013 + AluJo SINE Alu 286 296 -16 356 95 16 16 chr2 20155574 20155617 -233100966 + AluS SINE Alu 2 44 -259 310 91 0 0 chr2 20155617 20155661 -233100922 + Alu SINE Alu 1 44 -256 2357 114 0 0 chr2 20155661 20155969 -233100614 + AluSg SINE Alu 1 308 -2 349 187 11 22 chr2 20155969 20156060 -233100523 + GA-rich Low_complexity Low_complexity 1 90 0 1348 322 122 12 chr2 20156062 20156814 -233099769 + L2 LINE L2 1878 2743 -571 2331 106 0 0 chr2 20156814 20157107 -233099476 - AluSx SINE Alu -19 293 1 1348 322 122 12 chr2 20157107 20157241 -233099342 + L2 LINE L2 2743 2861 -453 485 356 13 43 chr2 20157316 20157619 -233098964 + L2 LINE L2 2977 3270 -2 260 297 39 50 chr2 20157728 20157910 -233098673 - L2 LINE L2 -165 3107 2928 1326 173 107 15 chr2 20158638 20158909 -233097674 - AluJo SINE Alu -6 296 1 1871 162 29 19 chr2 20158963 20159272 -233097311 - AluJo SINE Alu 0 312 1 703 296 62 65 chr2 20159310 20159743 -233096840 - MLT1K LTR MaLR -60 528 97 638 270 86 95 chr2 20160509 20160682 -233095901 + MLT1H LTR MaLR 3 176 -370 1929 182 0 3 chr2 20160682 20160989 -233095594 + AluJo SINE Alu 1 306 -6 638 270 86 95 chr2 20160989 20161331 -233095252 + MLT1H LTR MaLR 176 542 -4 181 246 246 0 chr2 20162043 20162100 -233094483 - L2 LINE L2 -1 3271 3201 181 264 28 28 chr2 20162265 20162337 -233094246 - MIR SINE MIR -9 253 182 21 36 0 0 chr2 20162360 20162388 -233094195 + AT_rich Low_complexity Low_complexity 1 28 0 1847 158 3 54 chr2 20162693 20163009 -233093574 + AluSx SINE Alu 1 300 -12 555 272 17 56 chr2 20163047 20163279 -233093304 - L1MC/D LINE L1 -1994 5814 5592 736 152 15 8 chr2 20163303 20163435 -233093148 - AluJb SINE Alu -178 134 2 206 207 45 18 chr2 20163622 20163733 -233092850 + (TA)n Simple_repeat Simple_repeat 1 114 0 561 274 36 32 chr2 20163811 20164030 -233092553 + MLT1K LTR MaLR 363 582 -6 196 310 14 0 chr2 20164034 20164105 -233092478 - MIR SINE MIR -175 87 16 297 0 0 0 chr2 20164630 20164663 -233091920 + (TG)n Simple_repeat Simple_repeat 2 34 0 207 307 188 33 chr2 20164909 20165212 -233091371 + L2 LINE L2 2567 2916 -398 1898 199 68 33 chr2 20165218 20165705 -233090878 - MLT1D LTR MaLR -1 504 1 218 270 79 32 chr2 20165748 20165811 -233090772 + MER91A DNA MER1_type 123 188 -8 243 282 55 80 chr2 20165816 20165979 -233090604 + L2 LINE L2 2954 3112 -160 998 271 66 3 chr2 20166364 20166729 -233089854 + HAL1 LINE L1 4 391 -2116 405 295 78 6 chr2 20166843 20167009 -233089574 + HAL1 LINE L1 605 782 -1725 1361 219 205 36 chr2 20167020 20167091 -233089492 + HAL1 LINE L1 1033 1091 -1416 2850 105 19 0 chr2 20167091 20167511 -233089072 - MSTA LTR MaLR 0 428 1 1361 219 205 36 chr2 20167511 20168111 -233088472 + HAL1 LINE L1 1091 1818 -689 1141 146 8 0 chr2 20168554 20168731 -233087852 + AluSg/x SINE Alu 129 296 -16 476 293 25 6 chr2 20168864 20169021 -233087562 + L1ME3A LINE L1 6010 6169 -1 256 250 29 0 chr2 20169819 20169887 -233086696 - LTR67 LTR ERVL -431 126 57 1844 112 108 7 chr2 20170393 20170671 -233085912 - AluSx SINE Alu -6 306 1 371 266 65 53 chr2 20171792 20171961 -233084622 - MIR3 SINE MIR -21 187 17 261 307 11 11 chr2 20172455 20172543 -233084040 + MIR SINE MIR 28 115 -147 999 291 35 38 chr2 20172843 20173266 -233083317 + L1ME1 LINE L1 5740 6161 -5 378 234 9 37 chr2 20174025 20174132 -233082451 - MLT1K LTR MaLR -31 557 454 276 293 10 10 chr2 20174140 20174239 -233082344 + CT-rich Low_complexity Low_complexity 2 100 0 225 317 58 8 chr2 20175675 20175795 -233080788 - MIR SINE MIR -61 147 22 302 239 68 0 chr2 20176673 20176761 -233079822 - MIR3 SINE MIR -8 200 107 561 170 113 50 chr2 20177270 20177411 -233079172 + MER5A DNA MER1_type 40 189 0 398 298 33 8 chr2 20177888 20178009 -233078574 + MER91A DNA MER1_type 3 126 -70 268 299 43 8 chr2 20178844 20178961 -233077622 - L1ME4a LINE L1 -38 6083 5963 798 197 11 38 chr2 20181557 20181740 -233074843 + MER5B DNA MER1_type 1 178 0 225 364 63 38 chr2 20181869 20182108 -233074475 + L2 LINE L2 2974 3218 -54 201 74 0 0 chr2 20182251 20182278 -233074305 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 2099 157 12 30 chr2 20182422 20182686 -233073897 + L1MB7 LINE L1 5751 6005 -179 2242 101 0 36 chr2 20182686 20182993 -233073590 - AluSx SINE Alu -16 296 1 2099 157 12 30 chr2 20182993 20183154 -233073429 + L1MB7 LINE L1 6005 6168 -16 314 242 15 91 chr2 20183196 20183328 -233073255 - MER5A DNA MER1_type -5 184 63 519 275 22 55 chr2 20184254 20184472 -233072111 - MIR SINE MIR -6 256 42 254 329 71 0 chr2 20184747 20184902 -233071681 + L2 LINE L2 2797 2962 -352 411 237 132 0 chr2 20184940 20185054 -233071529 + L2 LINE L2 3185 3313 0 326 292 189 11 chr2 20185068 20185328 -233071255 + L2 LINE L2 3008 3313 0 21 0 0 0 chr2 20186482 20186503 -233070080 + AT_rich Low_complexity Low_complexity 1 21 0 4319 163 21 51 chr2 20186618 20187021 -233069562 - L1MB4 LINE L1 -11 6169 5755 234 0 0 0 chr2 20187021 20187047 -233069536 + (TA)n Simple_repeat Simple_repeat 1 26 0 4319 163 21 51 chr2 20187047 20187524 -233069059 - L1MB4 LINE L1 -425 5755 5318 2151 131 10 0 chr2 20187524 20187829 -233068754 - AluSx SINE Alu -3 309 2 4319 163 21 51 chr2 20187829 20187971 -233068612 - L1MB4 LINE L1 -862 5318 5173 937 274 151 9 chr2 20188224 20188662 -233067921 - L2 LINE L2 -1 3312 2813 2067 145 95 25 chr2 20188668 20189068 -233067515 + MSTA LTR MaLR 1 428 0 1659 183 4 25 chr2 20189112 20189391 -233067192 + AluJo SINE Alu 1 273 -39 616 138 0 0 chr2 20189391 20189485 -233067098 + AluJb SINE Alu 203 296 -16 825 298 147 25 chr2 20189557 20190128 -233066455 - L2 LINE L2 -675 2639 1999 251 54 27 0 chr2 20190222 20190259 -233066324 + (TC)n Simple_repeat Simple_repeat 1 38 0 2145 141 3 0 chr2 20190259 20190556 -233066027 - AluSx SINE Alu -14 298 1 471 231 75 12 chr2 20191109 20191269 -233065314 - L2 LINE L2 -1313 2001 1832 813 191 96 50 chr2 20191283 20191503 -233065080 - MIR SINE MIR 0 262 33 196 273 0 0 chr2 20191500 20191544 -233065039 - L2 LINE L2 -1510 1804 1761 * 1383 230 31 49 chr2 20191544 20191935 -233064648 - MLT1J1 LTR MaLR 0 446 63 834 309 90 17 chr2 20192022 20192556 -233064027 - L2 LINE L2 -1554 1760 1188 960 300 76 15 chr2 20192616 20193228 -233063355 - L1ME3 LINE L1 -336 5826 5152 1845 172 21 0 chr2 20193228 20193513 -233063070 - AluJo SINE Alu -15 297 7 960 300 76 15 chr2 20193513 20193694 -233062889 - L1ME3 LINE L1 -1010 5152 4983 * 4701 176 42 32 chr2 20193661 20195192 -233061391 - L1MD1 LINE L1 0 6242 4688 266 330 72 21 chr2 20195222 20195555 -233061028 - L1MB4 LINE L1 -1063 5083 4734 1038 171 0 0 chr2 20195688 20195846 -233060737 - AluJb SINE Alu -18 294 137 1027 242 45 14 chr2 20195849 20196138 -233060445 + MER93a LTR ERV1 101 398 -4 2015 134 10 3 chr2 20196144 20196434 -233060149 - AluSx SINE Alu -20 292 1 415 303 81 10 chr2 20196437 20196833 -233059750 - L1MB4 LINE L1 -1397 4749 4326 451 210 36 90 chr2 20197932 20198099 -233058484 - MER113 DNA MER1_type? -4 517 360 2232 108 3 0 chr2 20198230 20198517 -233058066 + AluSx SINE Alu 1 288 -24 323 211 39 29 chr2 20198554 20198658 -233057925 - MER113 DNA MER1_type? -408 113 9 237 264 11 11 chr2 20198666 20198753 -233057830 + MIR SINE MIR 167 253 -9 775 173 27 22 chr2 20198787 20198972 -233057611 + MER53 DNA DNA 4 189 0 344 107 77 18 chr2 20199601 20199770 -233056813 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 469 67 62 56 chr2 20199729 20199908 -233056675 + (CACAC)n Simple_repeat Simple_repeat 1 180 0 204 109 65 0 chr2 20199911 20199957 -233056626 + (CA)n Simple_repeat Simple_repeat 2 50 0 407 226 46 111 chr2 20200104 20200321 -233056262 + L1MC5 LINE L1 7717 7919 -42 636 179 26 100 chr2 20200376 20200566 -233056017 + MER20 DNA MER1_type 1 176 -43 355 99 50 55 chr2 20200715 20200896 -233055687 + (CA)n Simple_repeat Simple_repeat 1 180 0 324 109 17 74 chr2 20200905 20201080 -233055503 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 366 96 61 17 chr2 20201111 20201226 -233055357 + (CA)n Simple_repeat Simple_repeat 2 121 0 508 142 59 6 chr2 20201244 20201413 -233055170 + (CA)n Simple_repeat Simple_repeat 1 178 0 360 0 0 0 chr2 20202094 20202134 -233054449 + (TG)n Simple_repeat Simple_repeat 2 41 0 987 170 13 0 chr2 20202178 20202331 -233054252 - FRAM SINE Alu -21 155 1 227 318 83 38 chr2 20204352 20204484 -233052099 - L2 LINE L2 -9 3263 3126 1125 263 104 51 chr2 20204968 20205529 -233051054 - MLT1G LTR MaLR -8 582 2 393 248 23 31 chr2 20206392 20206521 -233050062 + MER63 DNA MER1_type 933 1060 0 208 290 101 14 chr2 20206588 20206657 -233049926 - MIR SINE MIR -177 85 11 188 310 56 0 chr2 20206835 20206906 -233049677 - MIR SINE MIR -92 116 42 1020 220 0 0 chr2 20207129 20207338 -233049245 - MER3 DNA MER1_type 0 209 1 285 233 129 43 chr2 20208558 20208674 -233047909 + L2 LINE L2 3187 3312 -1 315 184 92 11 chr2 20209971 20210058 -233046525 - MER94 DNA DNA -14 120 27 396 133 27 27 chr2 20210063 20210138 -233046445 + L1MC5 LINE L1 7625 7699 -262 2150 118 7 7 chr2 20210151 20210455 -233046128 + AluSx SINE Alu 1 304 -8 1666 165 4 0 chr2 20210462 20210710 -233045873 + 7SLRNA srpRNA srpRNA 1 249 -71 998 119 0 0 chr2 20260722 20260856 -232995727 - AluSq/x SINE Alu -178 134 1 1987 101 4 0 chr2 20260932 20261199 -232995384 + AluSx SINE Alu 31 298 -14 255 232 0 18 chr2 20261256 20261312 -232995271 - Charlie8 DNA MER1_type -2362 55 1 201 267 17 0 chr2 20261579 20261639 -232994944 - MIR SINE MIR -13 249 189 521 254 116 17 chr2 20261711 20261884 -232994699 - MIR SINE MIR -4 258 69 1018 164 72 34 chr2 20261908 20262116 -232994467 + AluJb SINE Alu 90 305 -7 1853 118 0 0 chr2 20262203 20262466 -232994117 + AluSx SINE Alu 40 302 -10 231 329 25 0 chr2 20263060 20263139 -232993444 + L2 LINE L2 2634 2714 -600 190 335 23 34 chr2 20263195 20263354 -232993229 + L2 LINE L2 2828 2986 -286 1842 214 18 88 chr2 20263354 20263826 -232992757 + MLT1D LTR MaLR 1 433 -72 1789 152 0 24 chr2 20263826 20264139 -232992444 - AluJb SINE Alu 0 306 1 1842 214 18 88 chr2 20264139 20264208 -232992375 + MLT1D LTR MaLR 433 505 0 190 335 23 34 chr2 20264208 20264224 -232992359 + L2 LINE L2 2986 3001 -271 653 188 26 13 chr2 20264594 20264946 -232991637 + CT-rich Low_complexity Low_complexity 1 356 0 1726 146 0 0 chr2 20264971 20265225 -232991358 - AluSx SINE Alu -58 254 1 2153 101 3 0 chr2 20265736 20266033 -232990550 + AluSx SINE Alu 1 298 -14 1488 285 62 23 chr2 20266521 20267002 -232989581 - MLT1J LTR MaLR -8 503 4 471 254 50 76 chr2 20267038 20267327 -232989256 + L1ME1 LINE L1 5402 5693 -477 1028 91 0 0 chr2 20267327 20267459 -232989124 + AluSp SINE Alu 1 132 -181 192 338 0 0 chr2 20267745 20267813 -232988770 + L2 LINE L2 2985 3052 -220 250 196 0 20 chr2 20269438 20269489 -232987094 + MIR SINE MIR 31 80 -182 201 338 52 52 chr2 20270194 20270348 -232986235 + MER91A DNA MER1_type 20 173 -23 249 108 0 0 chr2 20271033 20271070 -232985513 + (CA)n Simple_repeat Simple_repeat 1 37 0 551 184 132 0 chr2 20271771 20271907 -232984676 + MER63A DNA MER1_type 54 207 -3 583 328 131 12 chr2 20272032 20272352 -232984231 + L2 LINE L2 2913 3270 -2 249 309 136 42 chr2 20272819 20273028 -232983555 + MIR3 SINE MIR 3 223 -39 * 326 301 286 15 chr2 20272990 20273196 -232983387 - MIR SINE MIR 0 262 1 228 301 48 39 chr2 20273691 20273794 -232982789 + MIR SINE MIR 89 192 -70 325 238 25 12 chr2 20274724 20274804 -232981779 - MIR SINE MIR -173 89 9 610 166 29 86 chr2 20275003 20275142 -232981441 + FLAM_C SINE Alu 1 131 -2 1441 211 50 8 chr2 20275776 20276140 -232980443 + L1ME1 LINE L1 5780 6158 -8 2246 97 0 22 chr2 20276250 20276570 -232980013 + AluSq SINE Alu 1 313 0 269 338 155 0 chr2 20277072 20277285 -232979298 + L2 LINE L2 2496 2741 -573 470 257 8 128 chr2 20277288 20277418 -232979165 + L1MC/D LINE L1 5265 5354 -2454 1892 127 0 0 chr2 20277418 20277713 -232978870 + AluSx SINE Alu 14 308 0 470 257 8 128 chr2 20277713 20277830 -232978753 + L1MC/D LINE L1 5354 5483 -2325 290 345 43 0 chr2 20278005 20278144 -232978439 + L1MC/D LINE L1 5696 5840 -1968 309 259 57 114 chr2 20278246 20278404 -232978179 + HAL1b LINE L1 1195 1343 -5 469 324 111 37 chr2 20278592 20278999 -232977584 + L2 LINE L2 2831 3267 -5 1962 240 76 15 chr2 20279641 20280232 -232976351 - L1ME3 LINE L1 -1 6161 5535 193 184 20 20 chr2 20280861 20280910 -232975673 - L3 LINE CR1 -126 1451 1403 213 245 53 21 chr2 20287180 20287274 -232969309 + L2 LINE L2 2992 3088 -225 302 173 99 25 chr2 20287360 20287441 -232969142 - MIR SINE MIR -87 175 89 182 310 46 35 chr2 20288040 20288127 -232968456 - L2 LINE L2 -51 3221 3134 556 304 109 9 chr2 20289061 20289281 -232967302 + MIR SINE MIR 20 261 -1 1912 110 45 7 chr2 20289847 20290137 -232966446 + AluSx SINE Alu 6 306 -6 186 314 110 34 chr2 20290787 20290905 -232965678 + MIR3 SINE MIR 71 197 -11 262 248 68 75 chr2 20291609 20291742 -232964841 - MIR SINE MIR -50 212 81 1840 84 4 0 chr2 20292472 20292709 -232963874 + AluSx SINE Alu 6 243 -69 539 262 93 65 chr2 20297238 20297452 -232959131 - MIR SINE MIR -1 261 42 534 342 16 5 chr2 20298034 20298227 -232958356 - MIR SINE MIR -48 214 20 253 298 106 14 chr2 20299923 20300064 -232956519 - MIR3 SINE MIR -52 156 3 305 250 74 9 chr2 20300569 20300677 -232955906 - MIR SINE MIR -67 141 27 747 174 0 0 chr2 20300925 20301103 -232955480 + (CA)n Simple_repeat Simple_repeat 1 178 0 453 205 0 0 chr2 20301130 20301257 -232955326 + (CA)n Simple_repeat Simple_repeat 2 128 0 187 205 26 0 chr2 20301723 20301762 -232954821 + L2 LINE L2 3178 3217 -96 238 130 19 19 chr2 20302748 20302802 -232953781 + (CA)n Simple_repeat Simple_repeat 1 54 0 257 318 119 0 chr2 20302831 20302957 -232953626 + MIR SINE MIR 108 248 -14 361 328 44 7 chr2 20303075 20303217 -232953366 - MIR3 SINE MIR -68 140 9 197 340 38 0 chr2 20303590 20303696 -232952887 - L3b LINE CR1 -181 1402 1293 207 0 0 0 chr2 20304497 20304520 -232952063 + (CA)n Simple_repeat Simple_repeat 2 24 0 232 255 88 0 chr2 20304956 20305058 -232951525 + L2 LINE L2 3005 3115 -157 21 104 0 0 chr2 20306640 20306717 -232949866 + GC_rich Low_complexity Low_complexity 1 77 0 22 56 0 0 chr2 20306742 20306778 -232949805 + GC_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr2 20306858 20306889 -232949694 + GC_rich Low_complexity Low_complexity 1 31 0 1302 100 0 0 chr2 20309134 20309304 -232947279 + AluSq SINE Alu 1 170 -143 1779 93 4 4 chr2 20309405 20309651 -232946932 - AluSx SINE Alu -66 246 1 1357 221 64 6 chr2 20309761 20310119 -232946464 - L1ME1 LINE L1 -8 6158 5780 197 254 0 0 chr2 20310126 20310181 -232946402 + L2 LINE L2 1656 1710 -1604 1240 139 0 10 chr2 20310187 20310201 -232946382 + AluSg/x SINE Alu 119 132 -178 2272 101 3 0 chr2 20310201 20310509 -232946074 + AluSx SINE Alu 1 309 -3 1240 139 0 10 chr2 20310509 20310688 -232945895 + AluSg/x SINE Alu 132 310 0 302 283 84 30 chr2 20310717 20310883 -232945700 - L1ME LINE L1 -302 5819 5645 317 297 0 27 chr2 20311117 20311228 -232945355 - L2 LINE L2 -214 3058 2951 879 132 6 12 chr2 20311557 20311724 -232944859 + (TTCC)n Simple_repeat Simple_repeat 4 169 0 3649 186 28 9 chr2 20311724 20312406 -232944177 - L1MC2 LINE L1 -8 6336 5642 542 183 67 0 chr2 20312406 20312526 -232944057 - L1MB2 LINE L1 -263 5908 5781 2378 199 97 6 chr2 20312555 20313449 -232943134 - L1MB2 LINE L1 -499 5672 4692 642 321 118 46 chr2 20313457 20313551 -232943032 - L1MB2 LINE L1 -2661 3485 3399 1767 167 0 29 chr2 20313551 20313862 -232942721 + AluJb SINE Alu 1 302 -10 642 321 118 46 chr2 20313862 20314308 -232942275 - L1MB2 LINE L1 -2747 3399 2846 735 171 8 0 chr2 20314310 20314427 -232942156 + FLAM_C SINE Alu 6 123 -20 403 301 39 19 chr2 20314466 20314622 -232941961 - L1MB2 LINE L1 -3262 2884 2726 2368 84 0 0 chr2 20316393 20316701 -232939882 + AluSg SINE Alu 1 308 -2 464 137 53 69 chr2 20316988 20317119 -232939464 + MER53 DNA DNA 1 129 -60 231 329 53 26 chr2 20317161 20317313 -232939270 - L2 LINE L2 -907 2407 2252 21 82 0 0 chr2 20317530 20317579 -232939004 + GC_rich Low_complexity Low_complexity 1 49 0 707 102 86 47 chr2 20317749 20317877 -232938706 - FLAM_C SINE Alu 0 133 1 207 206 0 111 chr2 20318601 20318634 -232937949 + L2 LINE L2 3240 3264 -49 2200 89 0 41 chr2 20318634 20318949 -232937634 + AluSx SINE Alu 1 302 -10 207 206 0 111 chr2 20318949 20318978 -232937605 + L2 LINE L2 3264 3295 -18 1807 189 0 6 chr2 20319194 20319506 -232937077 + AluJb SINE Alu 1 310 -2 2229 91 0 14 chr2 20320140 20320311 -232936272 - AluSx SINE Alu 0 304 137 2078 123 10 10 chr2 20320311 20320612 -232935971 - AluSp SINE Alu -12 301 1 2229 91 0 14 chr2 20320612 20320748 -232935835 - AluSx SINE Alu -167 137 1 348 296 171 22 chr2 20321229 20321432 -232935151 - MIR SINE MIR -32 230 12 360 150 17 0 chr2 20321473 20321533 -232935050 - U7 snRNA snRNA -2 61 1 481 211 49 28 chr2 20321806 20321948 -232934635 + L1ME3A LINE L1 5989 6133 -37 1745 164 27 0 chr2 20322046 20322345 -232934238 + AluJb SINE Alu 1 307 -5 2156 121 0 3 chr2 20323017 20323322 -232933261 + AluSg SINE Alu 1 304 -6 721 214 0 0 chr2 20323332 20323463 -232933120 + FLAM_C SINE Alu 1 131 -2 21 36 0 0 chr2 20325426 20325454 -232931129 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 20326209 20326234 -232930349 + AT_rich Low_complexity Low_complexity 1 25 0 343 256 173 15 chr2 20327126 20327259 -232929324 + L1ME LINE L1 5621 5774 -347 983 204 57 9 chr2 20327342 20327572 -232929011 + AluJb SINE Alu 62 302 -10 1219 135 163 28 chr2 20327979 20328261 -232928322 - MER2 DNA MER2_type -25 320 1 1571 184 15 0 chr2 20328359 20328626 -232927957 - AluJb SINE Alu -20 292 22 720 212 0 0 chr2 20328658 20328790 -232927793 - FLAM_C SINE Alu -1 132 1 1742 162 26 19 chr2 20329295 20329604 -232926979 - AluJb SINE Alu -1 311 1 26 0 0 0 chr2 20331384 20331410 -232925173 + AT_rich Low_complexity Low_complexity 1 26 0 2140 110 16 10 chr2 20331909 20332219 -232924364 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 20332921 20332942 -232923641 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr2 20333331 20333370 -232923213 + AT_rich Low_complexity Low_complexity 1 39 0 2876 16 0 0 chr2 20333796 20334112 -232922471 - AluYb8 SINE Alu -2 316 1 3945 186 32 33 chr2 20334437 20335402 -232921181 - L1MB4 LINE L1 -36 6144 5176 5130 147 101 64 chr2 20336066 20336254 -232920329 + Tigger3b DNA MER2_type 1 181 -2847 2367 96 0 10 chr2 20336254 20336568 -232920015 + AluSx SINE Alu 1 311 -1 5130 147 101 64 chr2 20336568 20337094 -232919489 + Tigger3b DNA MER2_type 181 686 -2342 930 188 0 0 chr2 20337094 20337243 -232919340 + FRAM SINE Alu 1 149 -17 5130 147 101 64 chr2 20337243 20337714 -232918869 + Tigger3b DNA MER2_type 686 1231 0 29 28 0 0 chr2 20339159 20339195 -232917388 + AT_rich Low_complexity Low_complexity 1 36 0 2465 87 0 0 chr2 20339202 20339512 -232917071 + AluSg SINE Alu 1 310 0 270 0 0 0 chr2 20339513 20339543 -232917040 + (TA)n Simple_repeat Simple_repeat 2 31 0 1557 95 9 18 chr2 20340189 20340410 -232916173 + AluSg/x SINE Alu 77 295 -15 1800 147 0 46 chr2 20341305 20341591 -232914992 + AluJb SINE Alu 1 272 -40 182 36 0 36 chr2 20341591 20341619 -232914964 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1800 147 0 46 chr2 20341619 20341659 -232914924 + AluJb SINE Alu 272 312 0 954 244 102 83 chr2 20341838 20342172 -232914411 + L1MC4 LINE L1 7520 7869 -173 2192 96 7 14 chr2 20342172 20342465 -232914118 - AluSx SINE Alu -15 297 7 954 244 102 83 chr2 20342465 20342638 -232913945 + L1MC4 LINE L1 7869 8037 -5 324 310 0 26 chr2 20343000 20343116 -232913467 + MER8 DNA MER2_type 27 139 -100 22 35 0 0 chr2 20343390 20343419 -232913164 + AT_rich Low_complexity Low_complexity 1 29 0 2001 138 0 20 chr2 20343483 20343788 -232912795 + AluSx SINE Alu 9 307 -5 341 279 106 0 chr2 20344079 20344183 -232912400 - MIR SINE MIR -78 184 70 34 0 0 0 chr2 20344325 20344359 -232912224 + AT_rich Low_complexity Low_complexity 1 34 0 2208 73 0 4 chr2 20344359 20344631 -232911952 - AluY SINE Alu -25 286 16 1899 158 0 7 chr2 20346458 20346750 -232909833 - AluSx SINE Alu -13 299 10 2074 109 7 0 chr2 20347024 20347300 -232909283 + AluSx SINE Alu 3 280 -32 375 78 0 0 chr2 20347301 20347352 -232909231 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 237 316 51 25 chr2 20347390 20347469 -232909114 + MIR SINE MIR 35 115 -147 1272 275 68 13 chr2 20347498 20348039 -232908544 - L1M4 LINE L1 -1166 4980 4410 232 271 132 23 chr2 20348335 20348464 -232908119 - MER20B DNA MER1_type -604 179 37 230 323 132 7 chr2 20349161 20349289 -232907294 + MIR SINE MIR 1 139 -69 1310 204 85 66 chr2 20350478 20351065 -232905518 + L1MC5 LINE L1 6975 7572 -389 23 0 0 0 chr2 20351110 20351133 -232905450 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr2 20352946 20352986 -232903597 + AT_rich Low_complexity Low_complexity 1 40 0 241 184 0 20 chr2 20353650 20353699 -232902884 + (CATA)n Simple_repeat Simple_repeat 3 50 0 847 203 35 25 chr2 20359234 20359436 -232897147 - MER105 DNA DNA 0 204 1 1378 182 8 8 chr2 20359527 20359763 -232896820 - AluJo SINE Alu -38 274 39 202 284 245 49 chr2 20360317 20360623 -232895960 + L2 LINE L2 2484 2849 -465 817 312 108 29 chr2 20360778 20361565 -232895018 - L2 LINE L2 0 3313 2412 590 241 64 35 chr2 20361652 20362025 -232894558 - L1M4 LINE L1 -2853 3293 2910 286 143 0 0 chr2 20362031 20362073 -232894510 + 5S rRNA rRNA 1 42 -79 561 171 48 0 chr2 20362771 20362876 -232893707 + FLAM_C SINE Alu 21 130 -13 294 317 108 52 chr2 20362912 20363161 -232893422 - L2 LINE L2 -815 2499 2237 1080 110 6 43 chr2 20364156 20364319 -232892264 + AluSg SINE Alu 1 157 -153 25 0 0 0 chr2 20366216 20366241 -232890342 + AT_rich Low_complexity Low_complexity 1 25 0 221 176 0 20 chr2 20366724 20366775 -232889808 + CT-rich Low_complexity Low_complexity 2 51 0 1665 122 12 8 chr2 20367517 20367764 -232888819 - AluSx SINE Alu -21 291 44 2114 93 18 4 chr2 20367794 20368104 -232888479 + AluSp SINE Alu 1 314 0 1960 148 20 3 chr2 20368574 20368877 -232887706 + AluSx SINE Alu 3 310 -2 632 161 31 19 chr2 20370900 20371061 -232885522 + Charlie5 DNA MER1_type 2423 2585 -27 2599 37 0 0 chr2 20371359 20371655 -232884928 + AluY SINE Alu 1 296 -15 364 203 40 3 chr2 20372061 20372185 -232884398 - AluJ/monomer SINE Alu -246 54 1 191 245 306 20 chr2 20372957 20373055 -232883528 + MIR SINE MIR 74 199 -63 241 378 99 13 chr2 20373228 20373379 -232883204 - L2 LINE L2 -55 3217 3054 243 139 0 0 chr2 20373725 20373732 -232882851 + (TAA)n Simple_repeat Simple_repeat 2 8 -36 1636 102 125 16 chr2 20373732 20373988 -232882595 + AluSg SINE Alu 1 284 -26 243 139 0 0 chr2 20373988 20374023 -232882560 + (TAA)n Simple_repeat Simple_repeat 7 44 0 2470 143 57 30 chr2 20374085 20374526 -232882057 + MER21A LTR ERV1 459 911 -20 1969 144 0 11 chr2 20374528 20374813 -232881770 + AluSx SINE Alu 1 282 -30 433 104 15 0 chr2 20374960 20375027 -232881556 - MER4E LTR ERV1 -5 761 694 * 1597 136 95 74 chr2 20375019 20375298 -232881285 - MER4B LTR ERV1 -235 375 85 2426 68 3 0 chr2 20375298 20375594 -232880989 - AluSp SINE Alu -16 297 1 1597 136 95 74 chr2 20375594 20375681 -232880902 - MER4B LTR ERV1 -525 85 1 3136 135 40 54 chr2 20375808 20376416 -232880167 + MER4A LTR ERV1 2 600 0 1765 155 35 7 chr2 20376740 20377024 -232879559 - AluJb SINE Alu -20 292 1 304 279 136 75 chr2 20377025 20377225 -232879358 - L1MC/D LINE L1 -297 5824 5638 561 215 15 39 chr2 20377225 20377355 -232879228 - FLAM_A SINE Alu -6 127 1 304 279 136 75 chr2 20377355 20377513 -232879070 - L1MC/D LINE L1 -483 5638 5449 25 31 0 0 chr2 20377513 20377545 -232879038 + AT_rich Low_complexity Low_complexity 1 32 0 237 276 31 10 chr2 20378052 20378150 -232878433 + MER72 LTR ERV1 377 476 -246 633 193 49 50 chr2 20378158 20378390 -232878193 + LTR45B LTR ERV1 302 525 0 409 147 53 13 chr2 20378457 20378532 -232878051 + AluJb SINE Alu 190 267 -45 370 276 55 8 chr2 20378607 20378734 -232877849 - L1MC/D LINE L1 -1526 4620 4488 864 245 117 11 chr2 20379538 20379803 -232876780 + MER58B DNA MER1_type 46 338 -3 655 233 89 30 chr2 20379819 20380089 -232876494 + MER33 DNA MER1_type 29 314 -10 1699 147 84 7 chr2 20380348 20380634 -232875949 + AluJb SINE Alu 1 308 -4 299 276 32 8 chr2 20380726 20380849 -232875734 + L1M4 LINE L1 3719 3844 -2302 399 300 120 42 chr2 20380909 20381084 -232875499 + L1M4 LINE L1 4360 4520 -1626 1682 140 57 4 chr2 20381084 20381388 -232875195 + AluJb SINE Alu 1 312 0 399 300 120 42 chr2 20381388 20381619 -232874964 + L1M4 LINE L1 4520 4798 -1348 1956 128 10 0 chr2 20381750 20382046 -232874537 - AluSx SINE Alu -7 305 7 2059 116 7 7 chr2 20382077 20382380 -232874203 + AluSx SINE Alu 1 303 -9 381 222 19 28 chr2 20382573 20382681 -232873902 + L1MD1 LINE L1 6079 6185 -57 219 315 137 0 chr2 20384327 20384400 -232872183 + MIR3 SINE MIR 85 167 -41 5452 70 14 3 chr2 20387713 20388446 -232868137 + L1P LINE L1 4490 5230 -916 1667 184 13 23 chr2 20388696 20389006 -232867577 + AluJb SINE Alu 1 307 -5 1650 173 11 11 chr2 20389006 20389284 -232867299 + AluJb SINE Alu 1 278 -34 215 30 0 30 chr2 20389299 20389332 -232867251 + (TAAAA)n Simple_repeat Simple_repeat 3 34 0 25 75 0 0 chr2 20389495 20389548 -232867035 + AT_rich Low_complexity Low_complexity 1 53 0 590 177 16 32 chr2 20390203 20390327 -232866256 - FLAM_C SINE Alu -2 141 20 255 364 66 13 chr2 20390327 20390478 -232866105 - L2 LINE L2 -239 3033 2875 855 184 0 0 chr2 20390824 20390965 -232865618 + AluJb SINE Alu 1 141 -171 228 130 0 0 chr2 20390982 20391028 -232865555 + (A)n Simple_repeat Simple_repeat 1 46 0 22 56 0 0 chr2 20391642 20391678 -232864905 + AT_rich Low_complexity Low_complexity 1 36 0 1273 165 89 58 chr2 20391771 20391896 -232864687 + AluJo SINE Alu 1 121 -191 1980 138 7 0 chr2 20391896 20392193 -232864390 + AluSx SINE Alu 1 299 -13 1273 165 89 58 chr2 20392193 20392358 -232864225 + AluJo SINE Alu 121 300 -12 3980 122 51 7 chr2 20392690 20393362 -232863221 - L1PA15 LINE L1 0 6165 5465 727 171 47 0 chr2 20393465 20393594 -232862989 + AluJo SINE Alu 1 135 -177 2002 100 62 0 chr2 20395131 20395420 -232861163 + AluSg1 SINE Alu 1 307 -2 34 84 0 0 chr2 20395680 20395763 -232860820 + AT_rich Low_complexity Low_complexity 1 83 0 1195 95 6 0 chr2 20396300 20396458 -232860125 + AluSc SINE Alu 148 306 -3 498 254 51 0 chr2 20397282 20397400 -232859183 + MER94 DNA DNA 11 134 0 1068 154 24 107 chr2 20397456 20397709 -232858874 + AluJo SINE Alu 5 236 -76 1455 193 0 0 chr2 20397711 20397976 -232858607 + AluJo SINE Alu 46 310 -2 394 176 49 40 chr2 20398194 20398312 -232858271 + MIR SINE MIR 41 158 -50 2318 106 0 0 chr2 20398312 20398614 -232857969 + AluY SINE Alu 1 302 -9 193 372 0 43 chr2 20398877 20398971 -232857612 - MIR3 SINE MIR -110 98 9 270 0 0 0 chr2 20399054 20399084 -232857499 + (A)n Simple_repeat Simple_repeat 1 30 0 183 279 82 0 chr2 20399356 20399417 -232857166 - MIR SINE MIR -108 100 35 24 0 0 0 chr2 20400644 20400668 -232855915 + AT_rich Low_complexity Low_complexity 1 24 0 2441 70 0 0 chr2 20400767 20401066 -232855517 - AluY SINE Alu -12 299 1 1645 263 86 54 chr2 20402747 20403198 -232853385 + L1ME LINE L1 92 527 -5543 1918 148 24 7 chr2 20403198 20403496 -232853087 + AluSx SINE Alu 1 303 -9 1645 263 86 54 chr2 20403496 20403953 -232852630 + L1ME LINE L1 527 1029 -5041 236 215 0 46 chr2 20403967 20404032 -232852551 - MER65C LTR ERV1 -7 454 393 1934 154 3 10 chr2 20404039 20404338 -232852245 + AluJb SINE Alu 5 301 -11 1149 169 0 31 chr2 20404386 20404611 -232851972 + AluJb SINE Alu 95 312 0 1287 214 110 27 chr2 20404614 20404988 -232851595 - MER65C LTR ERV1 -56 405 1 670 275 74 30 chr2 20404988 20405395 -232851188 + L1ME LINE L1 1079 1503 -4758 2889 205 117 33 chr2 20405401 20406152 -232850431 + MER21B LTR ERV1 1 814 -49 332 123 70 0 chr2 20406199 20406256 -232850327 + MER21B-int LTR ERV1 2 62 -4129 1514 188 97 18 chr2 20406410 20406750 -232849833 + MER21B-int LTR ERV1 146 512 -3679 261 139 0 0 chr2 20406762 20406805 -232849778 + (A)n Simple_repeat Simple_repeat 1 43 0 1448 210 41 7 chr2 20407006 20407301 -232849282 - MER58B DNA MER1_type -36 305 1 360 0 0 0 chr2 20407428 20407468 -232849115 + (TG)n Simple_repeat Simple_repeat 2 41 0 1396 174 106 4 chr2 20408399 20408689 -232847894 + AluJo SINE Alu 3 319 0 720 179 0 0 chr2 20408776 20408888 -232847695 + AluJ SINE Alu 1 112 -200 2234 148 61 5 chr2 20408889 20409266 -232847317 + MSTA LTR MaLR 2 399 -29 1144 155 0 52 chr2 20409272 20409465 -232847118 + AluJ SINE Alu 107 289 -23 24 0 0 0 chr2 20409465 20409489 -232847094 + AT_rich Low_complexity Low_complexity 1 24 0 1608 150 92 7 chr2 20410097 20410370 -232846213 - AluJo SINE Alu -16 296 1 1773 171 16 13 chr2 20411323 20411633 -232844950 - AluJb SINE Alu -1 311 1 1534 149 12 90 chr2 20411663 20411827 -232844756 - AluJb SINE Alu -16 296 121 279 0 0 0 chr2 20411827 20411858 -232844725 + (TG)n Simple_repeat Simple_repeat 2 32 0 1534 149 12 90 chr2 20411858 20411894 -232844689 - AluJb SINE Alu -191 121 84 486 0 0 0 chr2 20411894 20411948 -232844635 + (TG)n Simple_repeat Simple_repeat 1 54 0 1534 149 12 90 chr2 20411948 20412067 -232844516 - AluJb SINE Alu -228 84 1 181 296 0 0 chr2 20412728 20412772 -232843811 - L2 LINE L2 -224 3048 3005 230 343 149 17 chr2 20412989 20413164 -232843419 - MIR SINE MIR 0 262 65 2295 97 0 3 chr2 20413265 20413563 -232843020 + AluSx SINE Alu 6 302 -10 21 36 0 0 chr2 20414199 20414227 -232842356 + AT_rich Low_complexity Low_complexity 1 28 0 424 269 84 8 chr2 20414385 20414504 -232842079 + FLAM_A SINE Alu 6 133 0 1991 128 3 47 chr2 20414743 20415063 -232841520 + AluSx SINE Alu 1 306 -6 370 259 45 53 chr2 20415261 20415663 -232840920 - Charlie2 DNA MER1_type -2215 567 2 314 227 49 119 chr2 20415664 20415849 -232840734 + MER5B DNA MER1_type 6 177 -1 324 271 36 2 chr2 20415951 20416093 -232840490 + MIR SINE MIR 37 205 -57 674 181 0 9 chr2 20416183 20416299 -232840284 + AluJ SINE Alu 3 117 -195 238 350 30 0 chr2 20416352 20416452 -232840131 + L1MC/D LINE L1 5614 5716 -2092 2159 122 3 0 chr2 20416993 20417304 -232839279 + AluSx SINE Alu 1 312 0 651 184 142 0 chr2 20418124 20418265 -232838318 - AluJo SINE Alu -31 281 121 819 203 0 0 chr2 20418379 20418522 -232838061 + AluJ SINE Alu 123 265 -47 306 98 78 0 chr2 20418522 20418573 -232838010 + AluJ SINE Alu 241 295 -7 23 54 0 0 chr2 20418578 20418615 -232837968 + AT_rich Low_complexity Low_complexity 1 37 0 1241 202 0 91 chr2 20418769 20419066 -232837517 + AluJb SINE Alu 5 274 -38 1601 165 0 0 chr2 20419194 20419484 -232837099 - AluJb SINE Alu 0 319 30 2334 87 0 3 chr2 20419846 20420158 -232836425 + AluY SINE Alu 1 311 0 1671 143 6 78 chr2 20420228 20420550 -232836033 - AluJo SINE Alu -9 303 5 2243 90 7 0 chr2 20420737 20421025 -232835558 + AluSq SINE Alu 1 290 -23 748 178 0 8 chr2 20423191 20423312 -232833271 + FLAM_C SINE Alu 6 127 -185 216 0 0 0 chr2 20423312 20423336 -232833247 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1535 132 27 27 chr2 20423793 20424089 -232832494 + AluJb SINE Alu 1 296 -16 21 36 0 0 chr2 20425516 20425544 -232831039 + GC_rich Low_complexity Low_complexity 1 28 0 224 130 22 0 chr2 20425870 20425916 -232830667 + CT-rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr2 20426088 20426121 -232830462 + GC_rich Low_complexity Low_complexity 1 33 0 333 244 24 12 chr2 20426938 20427020 -232829563 + L2 LINE L2 3134 3216 -56 268 326 152 37 chr2 20427080 20427540 -232829043 + L2 LINE L2 2247 2759 -555 254 138 123 15 chr2 20427980 20428045 -232828538 + MLT1K LTR MaLR 513 584 -4 216 309 62 0 chr2 20428067 20428148 -232828435 - MIR SINE MIR -13 249 164 808 228 0 41 chr2 20428149 20428320 -232828263 + MER45A DNA AcHobo 1 164 -14 423 244 9 0 chr2 20428346 20428461 -232828122 + MER103 DNA DNA 49 164 -2 552 219 175 7 chr2 20428763 20428900 -232827683 + MER5A DNA MER1_type 29 188 -1 363 274 35 35 chr2 20428902 20429015 -232827568 + MLT1L LTR MaLR 151 263 -352 759 209 0 78 chr2 20429277 20429421 -232827162 - MER5B DNA MER1_type 0 178 51 2349 80 0 0 chr2 20429421 20429748 -232826835 + AluSq SINE Alu 1 313 0 759 209 0 78 chr2 20429748 20429794 -232826789 - MER5B DNA MER1_type -127 51 3 799 153 0 8 chr2 20429946 20430077 -232826506 + AluJo SINE Alu 5 134 -178 396 236 130 75 chr2 20430118 20430411 -232826172 - HAL1b LINE L1 -71 1277 969 405 0 0 0 chr2 20430411 20430456 -232826127 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 454 228 57 49 chr2 20430468 20430591 -232825992 - FRAM SINE Alu -49 127 4 396 213 132 114 chr2 20430593 20430714 -232825869 - HAL1b LINE L1 -365 983 866 2240 92 0 0 chr2 20430714 20431006 -232825577 + AluSg SINE Alu 2 293 -17 396 213 132 114 chr2 20431006 20431217 -232825366 - HAL1b LINE L1 -482 866 645 417 263 135 19 chr2 20431237 20431393 -232825190 - MLT1H LTR MaLR 0 549 376 790 215 134 11 chr2 20431441 20431627 -232824956 - MLT1H LTR MaLR -268 281 73 1642 173 10 13 chr2 20431693 20432006 -232824577 + AluJb SINE Alu 1 312 0 1368 150 120 15 chr2 20432097 20432363 -232824220 + AluJo SINE Alu 1 294 -18 362 192 77 13 chr2 20432375 20432453 -232824130 + LTR50 LTR ERVL 85 167 -628 962 90 0 0 chr2 20432499 20432632 -232823951 + AluSp SINE Alu 1 133 -180 315 111 25 12 chr2 20432637 20432718 -232823865 + (TA)n Simple_repeat Simple_repeat 2 83 0 1212 109 29 0 chr2 20432718 20432892 -232823691 + AluSp SINE Alu 123 301 -12 1256 237 139 31 chr2 20432973 20433425 -232823158 + LTR50 LTR ERVL 295 795 0 578 150 63 8 chr2 20433610 20433737 -232822846 - L1MB8 LINE L1 -1 6177 6044 265 235 0 0 chr2 20433765 20433816 -232822767 - MER66A LTR ERV1 -138 340 290 2249 75 3 38 chr2 20433841 20434160 -232822423 - AluY SINE Alu -3 308 1 1409 197 68 4 chr2 20434161 20434440 -232822143 - AluJb SINE Alu -5 297 1 923 204 5 16 chr2 20434442 20434633 -232821950 - L1MB8 LINE L1 -126 6052 5864 834 144 0 27 chr2 20434633 20434779 -232821804 - FLAM_C SINE Alu 0 143 2 1190 154 18 14 chr2 20434782 20435003 -232821580 - L1MB8 LINE L1 -306 5878 5657 1883 127 0 7 chr2 20435376 20435659 -232820924 + AluJb SINE Alu 1 281 -31 2031 136 10 0 chr2 20436046 20436348 -232820235 + AluSq SINE Alu 1 305 -8 1836 136 121 82 chr2 20436677 20436710 -232819873 - MSTA LTR MaLR -8 420 390 2037 128 3 6 chr2 20436710 20437022 -232819561 + AluSx SINE Alu 1 311 -1 1836 136 121 82 chr2 20437022 20437392 -232819191 - MSTA LTR MaLR -38 390 1 2264 112 0 0 chr2 20437576 20437888 -232818695 + AluSx SINE Alu 1 312 0 813 157 0 22 chr2 20438096 20438230 -232818353 + FLAM_A SINE Alu 1 131 -2 720 133 92 0 chr2 20438389 20438509 -232818074 + FLAM_C SINE Alu 3 133 0 2138 99 14 0 chr2 20439067 20439359 -232817224 + AluSx SINE Alu 1 296 -16 2022 135 0 7 chr2 20439380 20439683 -232816900 + AluJb SINE Alu 1 301 -11 1515 217 0 0 chr2 20440063 20440344 -232816239 + AluJb SINE Alu 1 281 -31 273 29 0 0 chr2 20440349 20440383 -232816200 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1642 262 91 16 chr2 20440686 20441516 -232815067 + L2 LINE L2 2413 3300 -13 754 146 7 44 chr2 20441518 20441655 -232814928 + FLAM_C SINE Alu 1 132 -1 228 384 0 0 chr2 20442147 20442220 -232814363 - L2 LINE L2 -1 3271 3199 2256 143 14 8 chr2 20442262 20442633 -232813950 - THE1C LTR MaLR 0 375 3 5717 118 1 5 chr2 20442635 20443420 -232813163 - THE1C-int LTR MaLR 0 1580 799 23 68 0 0 chr2 20443445 20443489 -232813094 + AT_rich Low_complexity Low_complexity 1 44 0 1320 229 93 45 chr2 20443496 20443777 -232812806 + LTR29 LTR ERV1 162 473 -149 1561 169 7 49 chr2 20443777 20444085 -232812498 + AluJb SINE Alu 1 295 -17 1320 229 93 45 chr2 20444085 20444243 -232812340 + LTR29 LTR ERV1 473 622 0 1860 150 54 10 chr2 20444245 20444558 -232812025 + LTR29-int LTR ERV1 1 327 -6004 611 235 26 20 chr2 20444591 20444744 -232811839 - MER74A LTR ERVL -404 154 1 232 143 125 71 chr2 20444820 20444876 -232811707 + MLT1H LTR MaLR 265 323 -226 229 173 13 147 chr2 20444952 20445027 -232811556 + MLT1H LTR MaLR 485 549 0 2280 134 41 6 chr2 20445089 20445454 -232811129 - MER41D LTR ERV1 -179 378 1 354 122 0 0 chr2 20445661 20445710 -232810873 - MER63 DNA MER1_type -35 1025 977 522 161 0 0 chr2 20445711 20445792 -232810791 - MER63 DNA MER1_type -311 751 671 192 77 0 0 chr2 20445793 20445819 -232810764 + (T)n Simple_repeat Simple_repeat 1 26 0 2067 96 11 0 chr2 20445840 20446121 -232810462 + AluSx SINE Alu 16 299 -13 730 215 0 13 chr2 20446124 20446273 -232810310 + MER6B DNA MER2_type 1 147 -63 418 133 13 53 chr2 20446301 20446376 -232810207 + MER6 DNA MER2_type 794 865 0 248 341 32 51 chr2 20446496 20446713 -232809870 + MLT1K LTR MaLR 183 395 -193 206 324 0 0 chr2 20446727 20446798 -232809785 + GA-rich Low_complexity Low_complexity 2 72 0 * 211 256 0 0 chr2 20446762 20446801 -232809782 + polypurine Low_complexity Low_complexity 1 39 0 2380 162 19 32 chr2 20446860 20447292 -232809291 - MSTB LTR MaLR 0 426 1 312 148 16 33 chr2 20447312 20447373 -232809210 + MLT1K LTR MaLR 529 588 0 2195 105 0 0 chr2 20447636 20447930 -232808653 + AluSx SINE Alu 6 299 -13 1080 204 180 0 chr2 20448372 20448490 -232808093 + AluJb SINE Alu 1 96 -206 306 0 0 0 chr2 20448490 20448524 -232808059 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1080 204 180 0 chr2 20448524 20448655 -232807928 + AluJb SINE Alu 96 295 -7 1692 107 0 0 chr2 20448774 20449062 -232807521 - AluSg SINE Alu 0 336 49 786 168 0 15 chr2 20449147 20449284 -232807299 + AluJo SINE Alu 2 136 -176 23 0 0 0 chr2 20449430 20449453 -232807130 + AT_rich Low_complexity Low_complexity 1 23 0 1745 144 0 54 chr2 20449509 20449822 -232806761 + AluSx SINE Alu 9 304 -8 220 205 36 36 chr2 20449866 20449949 -232806634 + A-rich Low_complexity Low_complexity 2 84 0 3420 132 71 91 chr2 20450861 20451620 -232804963 - Ricksha DNA DNA 0 3246 2503 955 176 24 0 chr2 20451620 20451790 -232804793 + FAM SINE Alu 1 174 -11 3957 134 41 24 chr2 20451792 20452080 -232804503 - Ricksha DNA DNA -735 2511 2230 1209 172 119 32 chr2 20452080 20452365 -232804218 + AluYa5 SINE Alu 1 310 -1 3957 134 41 24 chr2 20452365 20452405 -232804178 - Ricksha DNA DNA -1016 2230 2192 2013 121 20 0 chr2 20452405 20452703 -232803880 - AluSx SINE Alu -8 304 1 3957 134 41 24 chr2 20452703 20453052 -232803531 - Ricksha DNA DNA -1054 2192 1821 1046 210 73 4 chr2 20453050 20453283 -232803300 - Ricksha DNA DNA -2957 289 41 * 1065 277 45 3 chr2 20453306 20453616 -232802967 - LTR16A LTR ERVL -17 433 111 307 361 57 10 chr2 20453751 20453945 -232802638 - L2 LINE L2 -926 2388 2186 297 148 37 0 chr2 20454258 20454339 -232802244 + CT-rich Low_complexity Low_complexity 2 85 0 6218 73 8 16 chr2 20454757 20455442 -232801141 - L1PA10 LINE L1 0 6168 5489 2049 116 3 3 chr2 20455442 20455743 -232800840 - AluSx SINE Alu -11 301 1 6218 73 8 16 chr2 20455743 20455897 -232800686 - L1PA10 LINE L1 -679 5489 5335 598 227 37 12 chr2 20456295 20456458 -232800125 - L1M4 LINE L1 -1185 5459 5293 1502 243 26 31 chr2 20456464 20456847 -232799736 - L1M4 LINE L1 -5672 870 490 1361 228 99 50 chr2 20456857 20457156 -232799427 - L1M4 LINE L1 -6119 423 97 784 203 0 0 chr2 20457156 20457289 -232799294 + FLAM_C SINE Alu 1 133 0 1361 228 99 50 chr2 20457289 20457392 -232799191 - L1M4 LINE L1 -6445 97 1 2116 112 0 0 chr2 20457428 20457722 -232798861 - AluSg SINE Alu -16 294 1 357 167 0 0 chr2 20457722 20457782 -232798801 + MER69 DNA AcHobo 2467 2526 0 1406 205 35 35 chr2 20458067 20458408 -232798175 + MER58B DNA MER1_type 1 341 0 282 319 25 4 chr2 20458767 20458957 -232797626 + HERVR LTR ERV1 3950 4206 -3019 28 86 0 0 chr2 20458966 20459036 -232797547 + AT_rich Low_complexity Low_complexity 1 70 0 1754 130 48 0 chr2 20459217 20459509 -232797074 - AluSx SINE Alu 0 305 1 830 103 0 9 chr2 20459944 20460060 -232796523 + FLAM_C SINE Alu 3 117 -26 857 195 0 65 chr2 20460449 20460649 -232795934 - AluJ SINE Alu -14 298 112 498 222 94 0 chr2 20460988 20461105 -232795478 - MER58B DNA MER1_type 0 341 214 662 178 0 0 chr2 20461121 20461228 -232795355 - AluJ SINE Alu -203 109 3 2185 117 0 0 chr2 20462232 20462540 -232794043 - AluSx SINE Alu -4 308 1 195 296 110 19 chr2 20462862 20463002 -232793581 - MIR SINE MIR -63 145 22 226 193 72 84 chr2 20463503 20463586 -232792997 + MIR SINE MIR 110 191 -71 269 229 0 16 chr2 20463833 20463894 -232792689 - MER58A DNA MER1_type 0 224 165 1558 221 52 27 chr2 20463894 20464297 -232792286 - LTR47B LTR ERVL 0 443 31 1478 136 23 125 chr2 20464308 20464661 -232791922 - AluYb8 SINE Alu -1 317 1 819 198 76 0 chr2 20464701 20464858 -232791725 - MER58A DNA MER1_type -55 169 1 1005 127 19 0 chr2 20465468 20465625 -232790958 - AluSg/x SINE Alu -27 283 124 235 225 191 0 chr2 20468249 20468338 -232788245 - MLT1I LTR MaLR -26 383 278 324 295 54 39 chr2 20468502 20468631 -232787952 - MLT1I LTR MaLR -266 143 13 2275 92 0 6 chr2 20468638 20468952 -232787631 + AluSx SINE Alu 1 312 0 31 26 0 0 chr2 20470055 20470093 -232786490 + AT_rich Low_complexity Low_complexity 1 38 0 821 128 8 0 chr2 20470093 20470210 -232786373 - FLAM_C SINE Alu -15 118 1 1238 135 0 0 chr2 20470796 20470966 -232785617 + AluSx SINE Alu 2 171 -141 582 153 0 10 chr2 20472469 20472567 -232784016 - Tigger7 DNA MER2_type -1 2490 2394 1209 207 4 0 chr2 20472568 20472795 -232783788 - Tigger7 DNA MER2_type -2222 265 38 2530 243 59 22 chr2 20473280 20473992 -232782591 - MER21B LTR ERV1 -124 739 2 1720 142 12 12 chr2 20475061 20475315 -232781268 + AluSx SINE Alu 37 290 -22 279 183 28 70 chr2 20475316 20475387 -232781196 + MLT1I LTR MaLR 270 337 -72 1808 229 103 52 chr2 20475538 20475876 -232780707 + MER21B LTR ERV1 143 462 -401 768 197 0 0 chr2 20475876 20475998 -232780585 + FLAM_A SINE Alu 1 122 -11 1808 229 103 52 chr2 20475998 20476279 -232780304 + MER21B LTR ERV1 462 794 -69 317 113 75 0 chr2 20476313 20476366 -232780217 + MLT1I LTR MaLR 335 391 -18 685 80 0 0 chr2 20476782 20476870 -232779713 - 5S rRNA rRNA -33 88 1 2180 85 3 14 chr2 20476966 20477260 -232779323 - AluSc SINE Alu 0 309 19 814 142 63 0 chr2 20477300 20477427 -232779156 + FLAM_C SINE Alu 1 135 -8 2056 139 13 3 chr2 20477894 20478195 -232778388 + AluSx SINE Alu 4 307 -5 1529 126 0 0 chr2 20478352 20478575 -232778008 - L1PA14 LINE L1 -10 6151 5929 1596 225 16 31 chr2 20479005 20479392 -232777191 - MER57B LTR ERV1 -1 433 53 2500 101 0 0 chr2 20479397 20479704 -232776879 + AluSx SINE Alu 1 307 -5 2082 135 99 6 chr2 20479740 20480073 -232776510 - THE1B LTR MaLR 0 364 1 637 224 0 0 chr2 20480115 20480259 -232776324 + FLAM_A SINE Alu 1 144 0 2394 93 3 10 chr2 20481549 20481882 -232774701 - AluSx SINE Alu 0 331 1 284 120 20 0 chr2 20482080 20482130 -232774453 + CT-rich Low_complexity Low_complexity 3 53 0 757 220 8 0 chr2 20482130 20482262 -232774321 - FLAM_A SINE Alu 0 133 1 916 327 40 43 chr2 20482367 20482992 -232773591 - MER57-int LTR ERV1 -1338 6199 5573 2336 110 0 0 chr2 20482992 20483292 -232773291 - AluSc SINE Alu -9 300 1 916 327 40 43 chr2 20483292 20483524 -232773059 - MER57-int LTR ERV1 -1964 5573 2174 561 151 0 0 chr2 20483555 20483641 -232772942 + FAM SINE Alu 88 173 -12 376 221 0 0 chr2 20483642 20483728 -232772855 - L1 LINE L1 -3368 3799 3714 * 12017 181 23 36 chr2 20483715 20487016 -232769567 - L1 LINE L1 -3709 3458 195 2487 51 34 0 chr2 20487016 20487310 -232769273 - AluY SINE Alu -7 304 1 12017 181 23 36 chr2 20487310 20487491 -232769092 - L1 LINE L1 -6972 195 13 12547 116 77 27 chr2 20487878 20489014 -232767569 - L1PBa LINE L1 -3430 3432 2354 2217 128 3 3 chr2 20489014 20489312 -232767271 - AluSq SINE Alu -15 298 1 12547 116 77 27 chr2 20489312 20490329 -232766254 - L1PBa LINE L1 -4508 2354 1116 2334 48 0 0 chr2 20490329 20490602 -232765981 - AluY SINE Alu -4 307 35 12547 116 77 27 chr2 20490602 20491126 -232765457 - L1PBa LINE L1 -5746 1116 620 824 194 100 0 chr2 20491106 20491286 -232765297 - L1PBa LINE L1 -6663 200 3 * 21 0 0 0 chr2 20492725 20492746 -232763837 + AT_rich Low_complexity Low_complexity 1 21 0 2211 107 3 19 chr2 20492746 20493056 -232763527 + AluSp SINE Alu 1 305 -8 861 156 0 0 chr2 20493089 20493211 -232763372 - AluJ SINE Alu -23 289 168 2181 71 21 7 chr2 20493480 20493783 -232762800 - AluSq SINE Alu 0 307 1 2343 91 3 0 chr2 20493923 20494219 -232762364 - AluSp SINE Alu -16 297 1 356 250 0 0 chr2 20494335 20494415 -232762168 - MER96 DNA MER1_type? 0 175 96 186 314 127 34 chr2 20494463 20494581 -232762002 + MIR SINE MIR 119 247 -15 454 198 20 20 chr2 20494737 20494838 -232761745 + MER5B DNA MER1_type 4 104 -74 22 35 0 0 chr2 20496187 20496216 -232760367 + AT_rich Low_complexity Low_complexity 1 29 0 1210 160 0 11 chr2 20496667 20496848 -232759735 - AluJ SINE Alu -133 179 1 718 278 71 31 chr2 20497243 20497498 -232759085 - MER57B-int LTR ERV1 -7270 267 3 1474 205 79 70 chr2 20497502 20497932 -232758651 - MER57B LTR ERV1 0 434 1 2158 92 3 14 chr2 20499119 20499413 -232757170 + AluSx SINE Alu 1 291 -21 2301 115 3 0 chr2 20499668 20499964 -232756619 - AluSp SINE Alu -16 297 1 197 171 12 37 chr2 20500497 20500579 -232756004 + CT-rich Low_complexity Low_complexity 2 81 0 378 215 131 8 chr2 20501727 20501857 -232754726 - LTR50 LTR ERVL -577 218 73 473 288 122 40 chr2 20501916 20502194 -232754389 + L2 LINE L2 2962 3262 -10 822 258 190 5 chr2 20502322 20502543 -232754040 - MIR SINE MIR 0 262 1 372 185 97 18 chr2 20502996 20503129 -232753454 - MIR SINE MIR -62 146 11 275 126 18 189 chr2 20503993 20504104 -232752479 + MER53 DNA DNA 3 94 -95 * 305 202 48 0 chr2 20504033 20504117 -232752466 - MER53 DNA DNA -8 181 94 261 0 0 0 chr2 20504401 20504430 -232752153 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1218 201 81 116 chr2 20504433 20504571 -232752012 + MLT2B1 LTR ERVL 2 143 -377 1486 164 9 4 chr2 20504571 20504802 -232751781 - AluSx SINE Alu -80 232 1 1218 201 81 116 chr2 20504802 20505120 -232751463 + MLT2B1 LTR ERVL 143 442 -78 1721 168 25 11 chr2 20505163 20505443 -232751140 - AluJb SINE Alu -22 290 7 384 22 0 0 chr2 20505473 20505518 -232751065 + (CA)n Simple_repeat Simple_repeat 2 46 0 642 207 21 14 chr2 20505556 20505696 -232750887 + MER5A DNA MER1_type 39 179 -10 1993 122 72 31 chr2 20505953 20506313 -232750270 + THE1C LTR MaLR 1 375 0 261 290 70 30 chr2 20506473 20506573 -232750010 + MIR SINE MIR 48 151 -57 914 310 28 5 chr2 20506745 20507168 -232749415 + ERVL LTR ERVL 3116 3548 -2216 247 210 0 16 chr2 20507369 20507431 -232749152 + (TTCA)n Simple_repeat Simple_repeat 4 64 0 200 236 179 80 chr2 20507516 20507545 -232749038 + L2 LINE L2 1657 1682 -1632 1840 157 0 46 chr2 20507545 20507850 -232748733 + AluJo SINE Alu 1 291 -21 200 236 179 80 chr2 20507850 20508032 -232748551 + L2 LINE L2 1682 1889 -1425 495 347 99 39 chr2 20508054 20508226 -232748357 + L2 LINE L2 2554 2714 -558 2060 158 45 21 chr2 20508226 20508607 -232747976 - MLT1B LTR MaLR 0 390 1 495 347 99 39 chr2 20508607 20508915 -232747668 + L2 LINE L2 2714 3054 -218 298 313 12 0 chr2 20508953 20509036 -232747547 + L2 LINE L2 3226 3309 -4 707 252 88 35 chr2 20509236 20509617 -232746966 + MLT1H LTR MaLR 3 389 -166 311 308 109 14 chr2 20510184 20510405 -232746178 + L1ME3A LINE L1 5707 5948 -222 1937 161 7 0 chr2 20511206 20511511 -232745072 + AluJo SINE Alu 1 307 -5 339 319 35 18 chr2 20511631 20511744 -232744839 + MIR SINE MIR 40 154 -108 39 22 0 0 chr2 20512424 20512470 -232744113 + AT_rich Low_complexity Low_complexity 1 46 0 574 225 125 12 chr2 20512587 20512747 -232743836 - MER5A DNA MER1_type -2 187 10 289 122 65 9 chr2 20513029 20513136 -232743447 + (CA)n Simple_repeat Simple_repeat 2 114 0 1884 148 27 20 chr2 20513286 20513584 -232742999 - AluJb SINE Alu -12 300 1 273 232 161 18 chr2 20513587 20513699 -232742884 + L2 LINE L2 2623 2750 -564 1124 164 86 33 chr2 20513766 20514010 -232742573 + MER68 LTR ERV1 3 259 -303 249 33 0 0 chr2 20514030 20514060 -232742523 + (GA)n Simple_repeat Simple_repeat 2 31 0 2249 107 0 0 chr2 20514075 20514364 -232742219 - AluSc SINE Alu -20 289 1 1988 170 61 15 chr2 20514364 20514759 -232741824 - MLT2C2 LTR ERVL -49 415 3 2376 95 0 3 chr2 20514761 20515067 -232741516 + AluSx SINE Alu 2 306 -6 1192 194 54 67 chr2 20515077 20515391 -232741192 + MER68 LTR ERV1 249 558 -4 180 312 104 13 chr2 20515477 20515554 -232741029 + L2 LINE L2 2937 3020 -252 445 199 176 0 chr2 20515554 20515685 -232740898 - MLT1G1 LTR MaLR 0 555 402 502 322 7 7 chr2 20515720 20515872 -232740711 - MLT1G1 LTR MaLR -220 375 224 206 185 93 19 chr2 20516184 20516238 -232740345 + L2 LINE L2 3151 3208 -64 2859 135 71 29 chr2 20516542 20517062 -232739521 + L1PB4 LINE L1 5613 6154 -2 209 161 0 0 chr2 20517909 20517940 -232738643 + polypyrimidine Low_complexity Low_complexity 2 32 0 774 160 0 8 chr2 20517962 20518081 -232738502 - FLAM_C SINE Alu -15 118 1 406 264 96 2 chr2 20518227 20518347 -232738236 - MIR SINE MIR -60 148 28 1814 163 57 0 chr2 20518723 20518889 -232737694 - AluJo SINE Alu -12 300 110 306 0 0 0 chr2 20518889 20518923 -232737660 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1814 163 57 0 chr2 20518923 20519039 -232737544 - AluJo SINE Alu -202 110 2 231 318 0 0 chr2 20519046 20519112 -232737471 + L2 LINE L2 2980 3045 -227 1349 184 33 45 chr2 20519740 20519823 -232736760 - Charlie5 DNA MER1_type 0 2624 2541 2101 159 0 10 chr2 20519823 20520137 -232736446 + AluSx SINE Alu 1 311 -1 1349 184 33 45 chr2 20520137 20520449 -232736134 - Charlie5 DNA MER1_type -83 2541 2234 579 160 0 9 chr2 20520452 20520558 -232736025 - Charlie5 DNA MER1_type -2497 115 11 2501 68 0 3 chr2 20520917 20521227 -232735356 - AluY SINE Alu -2 309 1 2905 3 0 0 chr2 20521315 20521620 -232734963 - AluY SINE Alu -5 306 2 22 0 0 0 chr2 20522032 20522054 -232734529 + AT_rich Low_complexity Low_complexity 1 22 0 198 103 0 0 chr2 20522083 20522112 -232734471 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1964 142 7 0 chr2 20522380 20522682 -232733901 + AluSx SINE Alu 1 304 0 26 0 0 0 chr2 20523336 20523362 -232733221 + GC_rich Low_complexity Low_complexity 1 26 0 1548 175 15 58 chr2 20523613 20523939 -232732644 - AluJo SINE Alu 0 312 1 274 256 122 0 chr2 20524032 20524114 -232732469 - L2 LINE L2 -13 3259 3168 207 69 0 0 chr2 20524122 20524151 -232732432 + (CAGAGA)n Simple_repeat Simple_repeat 5 33 0 361 172 42 81 chr2 20524673 20525046 -232731537 + (TATTG)n Simple_repeat Simple_repeat 1 358 0 245 51 26 0 chr2 20525420 20525459 -232731124 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 32 0 0 chr2 20526118 20526149 -232730434 + GC_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr2 20527384 20527413 -232729170 + AT_rich Low_complexity Low_complexity 1 29 0 1007 189 22 0 chr2 20530226 20530406 -232726177 - MER5A DNA MER1_type -5 184 1 1754 161 34 10 chr2 20530640 20530931 -232725652 - AluJo SINE Alu -10 302 5 362 271 50 122 chr2 20530992 20531295 -232725288 - L2 LINE L2 -28 3244 2964 299 322 11 11 chr2 20531854 20531944 -232724639 - L2 LINE L2 -36 3236 3147 323 187 40 13 chr2 20531976 20532051 -232724532 - MLT1F LTR MaLR -465 77 1 543 194 121 0 chr2 20532053 20532177 -232724406 - MIR SINE MIR -91 171 33 266 321 166 25 chr2 20532224 20532501 -232724082 - L2 LINE L2 -629 2685 2370 1556 180 20 27 chr2 20533016 20533311 -232723272 + AluJo SINE Alu 8 300 -12 1811 164 0 30 chr2 20533357 20533655 -232722928 - AluJb SINE Alu -23 289 1 389 289 33 16 chr2 20534254 20534375 -232722208 + L2 LINE L2 3191 3313 0 1997 130 23 23 chr2 20534529 20534828 -232721755 + AluSx SINE Alu 1 299 -13 452 165 11 0 chr2 20534840 20534931 -232721652 + GA-rich Low_complexity Low_complexity 2 93 0 1390 148 28 5 chr2 20536292 20536508 -232720075 - AluJo SINE Alu -7 305 85 344 306 126 28 chr2 20536547 20536754 -232719829 + MIR3 SINE MIR 3 256 -6 280 281 117 39 chr2 20536847 20536975 -232719608 + L2 LINE L2 3168 3305 -8 873 158 0 0 chr2 20537003 20537136 -232719447 + AluJb SINE Alu 1 133 -179 31086 107 7 57 chr2 20537145 20543626 -232712957 + L1PA7 LINE L1 5 6154 0 195 129 0 0 chr2 20543686 20543717 -232712866 + (A)n Simple_repeat Simple_repeat 1 31 0 239 341 41 32 chr2 20543808 20543931 -232712652 + MER5A DNA MER1_type 63 186 -3 1003 183 0 50 chr2 20544190 20544392 -232712191 + AluJb SINE Alu 120 311 -1 2814 7 0 0 chr2 20545760 20546058 -232710525 + AluYa5 SINE Alu 1 298 -13 252 316 94 41 chr2 20547063 20547234 -232709349 + L2 LINE L2 3006 3185 -87 482 313 71 30 chr2 20547278 20547546 -232709037 + L3 LINE CR1 1275 1553 -24 374 273 74 8 chr2 20547795 20547916 -232708667 + L2 LINE L2 3184 3312 -1 384 293 78 0 chr2 20548125 20548241 -232708342 + L2 LINE L2 3184 3308 -5 637 213 8 0 chr2 20548404 20548531 -232708052 + MER45A DNA AcHobo 51 178 0 2176 119 18 49 chr2 20549045 20549432 -232707151 - THE1C LTR MaLR 0 375 1 2271 159 83 8 chr2 20549738 20550134 -232706449 - MSTB LTR MaLR 0 426 1 532 272 77 18 chr2 20550551 20550720 -232705863 - MIR3 SINE MIR -11 197 19 192 361 12 0 chr2 20550874 20550957 -232705626 - L2 LINE L2 -1 3271 3188 185 361 0 14 chr2 20551000 20551072 -232705511 - L3 LINE CR1 -62 1515 1445 205 330 177 7 chr2 20551232 20551351 -232705232 - MIR SINE MIR -1 207 70 274 321 128 24 chr2 20551892 20552141 -232704442 - L3 LINE CR1 -3 1574 1300 2227 103 14 3 chr2 20552521 20552812 -232703771 - AluSx SINE Alu -18 294 1 241 282 13 0 chr2 20553644 20553722 -232702861 + (TG)n Simple_repeat Simple_repeat 1 79 0 248 271 0 0 chr2 20554714 20554773 -232701810 + L2 LINE L2 3248 3306 -7 2270 137 98 3 chr2 20554776 20555162 -232701421 - MSTA LTR MaLR -2 426 4 234 263 92 99 chr2 20555434 20555586 -232700997 - MIR SINE MIR -56 206 56 245 280 9 103 chr2 20556358 20556407 -232700176 - MIR SINE MIR -70 192 156 2164 113 3 0 chr2 20556407 20556734 -232699849 - AluSq SINE Alu 0 328 1 245 280 9 103 chr2 20556734 20556790 -232699793 - MIR SINE MIR -106 156 96 1903 251 48 13 chr2 20556790 20557173 -232699410 + MER90 LTR ERV1 1 410 -165 2806 82 3 3 chr2 20557173 20557528 -232699055 + THE1A LTR MaLR 1 355 0 1903 251 48 13 chr2 20557528 20557691 -232698892 + MER90 LTR ERV1 410 566 -9 251 208 39 104 chr2 20557700 20557777 -232698806 - MIR SINE MIR -163 99 28 580 235 87 11 chr2 20558465 20558645 -232697938 - MIR SINE MIR -60 202 6 216 0 0 0 chr2 20558769 20558793 -232697790 + (CTG)n Simple_repeat Simple_repeat 1 24 0 1002 244 85 3 chr2 20558793 20559100 -232697483 + LTR16A LTR ERVL 119 450 0 2366 89 20 0 chr2 20559365 20559668 -232696915 + AluSc SINE Alu 1 309 0 832 73 9 0 chr2 20559682 20559791 -232696792 + HY1 scRNA scRNA 2 111 -1 278 318 65 9 chr2 20559978 20560085 -232696498 - L2 LINE L2 -18 3254 3142 788 185 99 0 chr2 20560164 20560326 -232696257 + AluJo SINE Alu 120 297 -15 2277 104 0 16 chr2 20560328 20560657 -232695926 + AluSq SINE Alu 1 313 0 251 318 65 26 chr2 20561113 20561267 -232695316 + L2 LINE L2 2924 3083 -189 207 0 0 0 chr2 20561689 20561712 -232694871 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1928 146 30 7 chr2 20561836 20562137 -232694446 - AluSx SINE Alu -4 308 1 208 284 14 0 chr2 20562176 20562250 -232694333 + (TG)n Simple_repeat Simple_repeat 2 76 0 196 265 0 0 chr2 20562867 20562916 -232693667 - MIR SINE MIR -65 143 95 1616 188 34 28 chr2 20563608 20563965 -232692618 + MLT1A2 LTR MaLR 1 359 -15 212 283 0 19 chr2 20564907 20564960 -232691623 + G-rich Low_complexity Low_complexity 3 54 0 246 62 0 0 chr2 20565085 20565117 -232691466 + (TCCCC)n Simple_repeat Simple_repeat 2 33 0 2219 120 7 3 chr2 20565145 20565454 -232691129 - AluSx SINE Alu -2 310 1 272 191 62 80 chr2 20565824 20565937 -232690646 - MIR SINE MIR -67 141 47 187 323 92 0 chr2 20567523 20567588 -232688995 - L3 LINE CR1 -1 1576 1506 304 304 36 0 chr2 20567664 20567776 -232688807 + MLT1J2 LTR MaLR 39 154 -296 243 147 200 53 chr2 20567969 20568044 -232688539 + MLT1I LTR MaLR 315 400 -9 238 356 30 30 chr2 20568054 20568189 -232688394 - L3 LINE CR1 -107 1470 1336 2178 118 23 3 chr2 20568202 20568506 -232688077 - AluSx SINE Alu 0 312 3 816 204 16 54 chr2 20568534 20568624 -232687959 - MER5A DNA MER1_type -5 184 103 1762 176 19 53 chr2 20568624 20568999 -232687584 + MLT1A1 LTR MaLR 1 362 -3 816 204 16 54 chr2 20568999 20569094 -232687489 - MER5A DNA MER1_type -86 103 6 291 288 61 38 chr2 20569247 20569379 -232687204 + L2 LINE L2 3138 3272 0 195 225 11 34 chr2 20570113 20570202 -232686381 + CT-rich Low_complexity Low_complexity 1 87 0 712 265 78 24 chr2 20570210 20570580 -232686003 - L1MC5 LINE L1 -35 7926 7537 386 241 82 17 chr2 20571438 20571604 -232684979 + L1ME4a LINE L1 5436 5607 -514 1477 180 13 49 chr2 20571610 20571626 -232684957 - AluJo SINE Alu -11 301 286 190 0 0 0 chr2 20571626 20571647 -232684936 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1477 180 13 49 chr2 20571647 20571800 -232684783 - AluJo SINE Alu -26 286 145 2075 138 17 0 chr2 20571800 20572089 -232684494 - AluSx SINE Alu -12 300 7 1477 180 13 49 chr2 20572089 20572224 -232684359 - AluJo SINE Alu -167 145 7 679 270 95 5 chr2 20572238 20572460 -232684123 - L2 LINE L2 0 3313 3072 442 318 103 26 chr2 20572464 20572799 -232683784 + L1ME4a LINE L1 5608 5977 -144 2353 88 3 0 chr2 20572799 20573107 -232683476 + AluSq SINE Alu 1 309 -4 442 318 103 26 chr2 20573107 20573149 -232683434 + L1ME4a LINE L1 5977 6014 -107 405 288 8 38 chr2 20573609 20573741 -232682842 - MIR SINE MIR -115 147 20 508 260 80 30 chr2 20574039 20574239 -232682344 - MIR SINE MIR 0 262 53 1734 137 43 47 chr2 20574254 20574554 -232682029 - AluJb SINE Alu -13 299 1 266 111 0 0 chr2 20574689 20574734 -232681849 + MADE1 DNA Mariner 1 45 -35 490 276 19 26 chr2 20574799 20574955 -232681628 - MIR SINE MIR -105 157 3 347 320 35 23 chr2 20577174 20577230 -232679353 - MIR SINE MIR -6 256 202 324 0 0 0 chr2 20577230 20577266 -232679317 + (TG)n Simple_repeat Simple_repeat 1 36 0 347 320 35 23 chr2 20577266 20577284 -232679299 - MIR SINE MIR -60 202 186 3645 173 28 17 chr2 20577284 20578005 -232678578 - L1MB7 LINE L1 -19 6165 5437 347 320 35 23 chr2 20578005 20578101 -232678482 - MIR SINE MIR -76 186 83 211 298 14 116 chr2 20578884 20579099 -232677484 - L2 LINE L2 -95 3177 2985 1553 120 4 12 chr2 20579509 20579750 -232676833 + AluY SINE Alu 72 310 -1 2903 208 20 85 chr2 20580096 20581033 -232675550 - LTR5 LTR ERVK -93 876 1 2028 96 0 30 chr2 20581192 20581516 -232675067 - AluY SINE Alu 0 311 1 1384 249 62 48 chr2 20581791 20582453 -232674130 - L1MC5 LINE L1 -385 7576 6906 2014 88 3 114 chr2 20582465 20582817 -232673766 - AluSq SINE Alu 0 313 1 911 182 61 74 chr2 20582818 20583049 -232673534 - L1MC5 LINE L1 -1041 6920 6693 1793 202 16 47 chr2 20583049 20583435 -232673148 - MLT1A2 LTR MaLR 0 374 1 1549 269 58 33 chr2 20583442 20583694 -232672889 - L1MC5 LINE L1 -1866 5942 5698 1869 128 62 0 chr2 20583694 20583984 -232672599 - AluSx SINE Alu -4 308 1 1549 269 58 33 chr2 20583984 20584329 -232672254 - L1MC5 LINE L1 -2110 5698 5330 22 35 0 0 chr2 20584400 20584429 -232672154 + AT_rich Low_complexity Low_complexity 1 29 0 986 207 78 18 chr2 20585761 20586155 -232670428 + L1MC/D LINE L1 5067 5491 -743 847 252 48 9 chr2 20586579 20586809 -232669774 - MIR SINE MIR 0 262 24 468 203 15 60 chr2 20586948 20587051 -232669532 - MLT1J1 LTR MaLR -317 129 32 2135 113 0 43 chr2 20587051 20587377 -232669206 + AluSx SINE Alu 1 312 0 468 203 15 60 chr2 20587377 20587406 -232669177 - MLT1J1 LTR MaLR -414 32 3 1455 136 35 112 chr2 20587422 20587761 -232668822 - AluYb8 SINE Alu -5 313 1 265 242 55 86 chr2 20588672 20588800 -232667783 + MIR SINE MIR 61 184 -78 340 291 48 0 chr2 20588991 20589094 -232667489 + MLT1L LTR MaLR 195 302 -313 1731 137 3 61 chr2 20589102 20589430 -232667153 + AluJb SINE Alu 3 311 -1 477 176 130 38 chr2 20589519 20589650 -232666933 - MLT1C LTR MaLR -324 143 1 353 178 129 40 chr2 20589675 20589776 -232666807 - MLT1C LTR MaLR -352 115 6 747 289 81 65 chr2 20589784 20590613 -232665970 + L2 LINE L2 2481 3313 0 2287 100 0 0 chr2 20591470 20591781 -232664802 + AluSx SINE Alu 1 311 -1 284 295 86 60 chr2 20591962 20592086 -232664497 + L2 LINE L2 2618 2737 -577 2269 107 0 0 chr2 20592086 20592395 -232664188 + AluSx SINE Alu 1 309 -3 284 295 86 60 chr2 20592395 20592606 -232663977 + L2 LINE L2 2737 2962 -352 1594 251 42 20 chr2 20592615 20593065 -232663518 + MLT1C LTR MaLR 1 460 -7 277 373 85 0 chr2 20593389 20593507 -232663076 - L2 LINE L2 -4 3309 3182 182 340 21 21 chr2 20593718 20593812 -232662771 - MIR SINE MIR -61 147 54 2028 129 64 45 chr2 20593952 20594309 -232662274 - THE1B LTR MaLR 0 364 1 230 259 123 25 chr2 20594845 20594926 -232661657 - L2 LINE L2 0 3272 3184 2097 116 0 26 chr2 20596632 20596943 -232659640 - AluSx SINE Alu -9 303 1 189 331 88 38 chr2 20597118 20597381 -232659202 - L2 LINE L2 -344 2970 2695 1471 220 39 33 chr2 20597492 20597855 -232658728 + MLT1A1 LTR MaLR 1 365 0 389 235 35 35 chr2 20599455 20599570 -232657013 + MIR SINE MIR 20 134 -74 446 293 152 10 chr2 20599599 20599797 -232656786 - MIR SINE MIR -12 250 25 1419 221 140 35 chr2 20599799 20599893 -232656690 + MLT1D LTR MaLR 1 84 -421 1594 178 49 0 chr2 20599893 20600179 -232656404 + AluJb SINE Alu 1 300 -12 1419 221 140 35 chr2 20600179 20600541 -232656042 + MLT1D LTR MaLR 84 505 0 2126 128 0 0 chr2 20601629 20601934 -232654649 + AluSg SINE Alu 1 305 -5 318 294 18 9 chr2 20602442 20602551 -232654032 + MER94 DNA DNA 10 119 -15 320 197 15 15 chr2 20604588 20604654 -232651929 - MIR SINE MIR -176 86 21 539 271 127 14 chr2 20604807 20605028 -232651555 + MIR SINE MIR 17 262 0 180 176 0 0 chr2 20605080 20605114 -232651469 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 660 311 48 4 chr2 20605877 20606105 -232650478 - MIR SINE MIR -1 261 24 325 306 100 19 chr2 20606130 20606290 -232650293 - MIR SINE MIR -23 239 67 465 261 99 0 chr2 20607212 20607354 -232649229 - MER103 DNA DNA -9 157 2 274 306 162 14 chr2 20607580 20607796 -232648787 - L2 LINE L2 -40 3232 2985 1834 148 21 0 chr2 20608926 20609216 -232647367 - AluJb SINE Alu -16 296 1 291 214 71 0 chr2 20609216 20609277 -232647306 - L2 LINE L2 -7 3265 3197 1982 141 0 3 chr2 20609681 20609980 -232646603 - AluSx SINE Alu -14 298 1 371 294 76 0 chr2 20610913 20611032 -232645551 + MIR SINE MIR 16 143 -65 252 152 22 0 chr2 20611522 20611568 -232645015 + L2 LINE L2 3223 3269 -3 2031 125 3 10 chr2 20612230 20612541 -232644042 - AluSx SINE Alu -3 309 1 204 308 122 17 chr2 20613291 20613463 -232643120 - L2 LINE L2 -167 3105 2916 654 204 9 0 chr2 20613531 20613644 -232642939 + MER81 DNA DNA 1 114 0 872 164 68 53 chr2 20614293 20614529 -232642054 + AluJb SINE Alu 76 314 0 2071 97 35 3 chr2 20614778 20615068 -232641515 + AluSx SINE Alu 1 299 -13 742 106 176 24 chr2 20615073 20615243 -232641340 + L1MB4 LINE L1 5985 6180 0 * 1639 142 36 45 chr2 20615241 20615578 -232641005 + L1MD3 LINE L1 7652 7985 -10 3716 179 41 8 chr2 20616068 20616772 -232639811 - LTR8A LTR ERV1 0 727 1 417 330 86 14 chr2 20617980 20618201 -232638382 - MIR SINE MIR -6 256 20 226 200 36 0 chr2 20619734 20619789 -232636794 - L2 LINE L2 -213 3059 3003 247 286 26 13 chr2 20622034 20622111 -232634472 - MIR SINE MIR -110 152 75 391 274 76 30 chr2 20622373 20622570 -232634013 + MIR SINE MIR 47 252 -10 8353 79 5 10 chr2 20623584 20624661 -232631922 - MER11C LTR ERVK 0 1071 1 328 253 0 35 chr2 20624710 20624797 -232631786 - L2 LINE L2 -5 3308 3225 1415 192 58 10 chr2 20624806 20625258 -232631325 + MLT1F1 LTR MaLR 10 567 0 222 339 119 26 chr2 20625520 20625898 -232630685 - L2 LINE L2 -453 2861 2449 1580 214 35 6 chr2 20626088 20626430 -232630153 + MLT1A2 LTR MaLR 8 359 -15 1043 222 38 8 chr2 20626593 20626859 -232629724 + Charlie1b DNA MER1_type 53 326 -197 674 141 0 0 chr2 20626873 20626965 -232629618 + AluSx SINE Alu 2 93 -219 1347 118 29 0 chr2 20627022 20627226 -232629357 + AluSx SINE Alu 103 312 0 992 151 5 24 chr2 20627226 20627431 -232629152 + Charlie1b DNA MER1_type 323 523 0 205 200 0 22 chr2 20628406 20628451 -232628132 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 190 292 97 0 chr2 20629152 20629224 -232627359 + L2 LINE L2 2985 3063 -209 650 210 0 8 chr2 20629272 20629391 -232627192 + FLAM_C SINE Alu 2 119 -24 2047 86 0 0 chr2 20629517 20629785 -232626798 + AluY SINE Alu 40 307 -4 199 208 236 0 chr2 20629864 20629936 -232626647 - L2 LINE L2 -2 3311 3223 290 333 119 6 chr2 20630990 20631167 -232625416 + MIR SINE MIR 63 259 -3 1884 171 14 112 chr2 20631720 20631949 -232624634 - MSTD LTR MaLR 0 396 229 1820 149 7 7 chr2 20631949 20632245 -232624338 - AluJb SINE Alu -16 296 1 1884 171 14 112 chr2 20632245 20632454 -232624129 - MSTD LTR MaLR -167 229 1 1791 227 53 27 chr2 20632681 20633131 -232623452 - LTR40b LTR ERVL 0 462 1 2022 85 67 0 chr2 20633274 20633556 -232623027 + AluSq SINE Alu 1 301 -12 826 224 12 0 chr2 20634154 20634324 -232622259 - MER45A DNA AcHobo -5 173 2 345 160 53 0 chr2 20634458 20634552 -232622031 + CT-rich Low_complexity Low_complexity 2 100 0 391 249 89 30 chr2 20634908 20635077 -232621506 - HAL1 LINE L1 -105 2402 2224 454 193 132 89 chr2 20635905 20636118 -232620465 - HAL1 LINE L1 -891 1616 1395 192 267 100 0 chr2 20637922 20637982 -232618601 - MIR3 SINE MIR -34 174 109 1158 127 0 11 chr2 20638256 20638600 -232617983 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 425 296 40 0 chr2 20639466 20639591 -232616992 - MIR SINE MIR -56 152 23 340 333 113 6 chr2 20640036 20640213 -232616370 + L2 LINE L2 3074 3269 -3 213 191 24 0 chr2 20640250 20640292 -232616291 + L2 LINE L2 3261 3303 -10 260 296 12 0 chr2 20640358 20640439 -232616144 + (CA)n Simple_repeat Simple_repeat 1 82 0 4118 191 27 46 chr2 20640535 20641031 -232615552 + MER21B LTR ERV1 1 476 -387 1913 154 3 3 chr2 20641031 20641342 -232615241 + AluJo SINE Alu 1 311 -1 4118 191 27 46 chr2 20641342 20641723 -232614860 + MER21B LTR ERV1 476 862 -1 257 159 63 0 chr2 20642087 20642150 -232614433 - MIR3 SINE MIR -38 170 104 623 175 3 1 chr2 20642620 20642733 -232613850 + MER5A DNA MER1_type 4 106 -72 328 321 57 13 chr2 20643018 20643177 -232613406 - L3 LINE CR1 -68 1509 1344 2038 145 3 0 chr2 20643307 20643618 -232612965 - AluSx SINE Alu 0 312 1 2323 95 0 0 chr2 20645435 20645741 -232610842 - AluSq SINE Alu -7 306 1 313 342 52 36 chr2 20645876 20646069 -232610514 - MIR SINE MIR -16 246 51 566 287 165 6 chr2 20647090 20647435 -232609148 - L2 LINE L2 -298 3015 2622 202 298 106 21 chr2 20647560 20647654 -232608929 - L2 LINE L2 -37 3235 3134 729 181 90 23 chr2 20648263 20648440 -232608143 + MER53 DNA DNA 1 189 0 278 333 65 0 chr2 20650811 20650934 -232605649 - MIR SINE MIR -62 146 16 412 304 163 9 chr2 20651300 20651527 -232605056 + MIR SINE MIR 1 262 0 226 186 14 129 chr2 20651824 20651894 -232604689 + MLT1E2 LTR MaLR 1 62 -564 516 261 46 20 chr2 20651897 20652050 -232604533 + MLT1C LTR MaLR 1 157 -348 619 194 60 8 chr2 20652059 20652193 -232604390 + MLT1C LTR MaLR 284 424 -43 442 333 36 0 chr2 20653650 20653837 -232602746 + MIR SINE MIR 4 200 -62 1583 153 47 14 chr2 20654817 20655115 -232601468 - AluJb SINE Alu 0 307 1 186 176 29 0 chr2 20655448 20655482 -232601101 + L2 LINE L2 3263 3297 -16 352 303 125 7 chr2 20657490 20657642 -232598941 - MIR SINE MIR -7 255 86 2081 136 3 3 chr2 20659070 20659379 -232597204 + AluSx SINE Alu 1 309 -3 619 294 22 15 chr2 20659414 20659645 -232596938 + L1ME4a LINE L1 5316 5548 -616 1686 215 97 63 chr2 20660109 20660170 -232596413 - MLT1E1 LTR MaLR -4 650 593 2287 112 0 0 chr2 20660170 20660482 -232596101 - AluSx SINE Alu 0 312 1 1686 215 97 63 chr2 20660482 20661005 -232595578 - MLT1E1 LTR MaLR -61 593 46 442 250 0 10 chr2 20662066 20662170 -232594413 - LTR67 LTR ERVL -22 535 433 594 315 25 30 chr2 20664083 20664130 -232592453 - MIR SINE MIR -15 247 201 528 225 117 0 chr2 20664130 20664250 -232592333 - MER94 DNA DNA 0 134 1 594 315 25 30 chr2 20664250 20664437 -232592146 - MIR SINE MIR -61 201 14 230 248 353 20 chr2 20664685 20664838 -232591745 - MIR SINE MIR -22 240 37 444 278 150 32 chr2 20665782 20666188 -232590395 + L1ME4a LINE L1 5515 5968 -153 1020 86 0 0 chr2 20666467 20666607 -232589976 + AluY SINE Alu 171 310 -1 235 268 118 0 chr2 20666962 20667089 -232589494 + L1ME4a LINE L1 5978 6119 -2 1758 103 7 39 chr2 20667178 20667459 -232589124 - AluSq SINE Alu -41 272 1 329 338 58 29 chr2 20667874 20668152 -232588431 - L3 LINE CR1 -202 1375 1090 218 350 29 0 chr2 20669605 20669708 -232586875 - MIR SINE MIR -77 185 80 1824 149 28 0 chr2 20670407 20670696 -232585887 - AluSx SINE Alu -15 297 1 655 174 35 0 chr2 20670999 20671114 -232585469 + AluSg/x SINE Alu 124 242 -68 237 266 231 6 chr2 20671210 20671379 -232585204 + L2 LINE L2 2553 2759 -555 506 224 75 0 chr2 20671382 20671489 -232585094 - MLT1D LTR MaLR -3 464 350 745 261 62 28 chr2 20671525 20671794 -232584789 - MLT1D LTR MaLR -190 277 1 622 254 131 30 chr2 20671795 20672266 -232584317 + L2 LINE L2 2756 3283 -30 186 43 0 0 chr2 20672272 20672295 -232584288 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 190 330 10 10 chr2 20672802 20672899 -232583684 + MIR SINE MIR 44 140 -68 508 249 75 35 chr2 20672916 20673089 -232583494 + MER117 DNA MER1_type 1 180 -17 1719 224 17 8 chr2 20673495 20673857 -232582726 - MLT1A1 LTR MaLR 0 365 1 342 277 0 24 chr2 20674105 20674188 -232582395 + MER91A DNA MER1_type 101 181 -15 2026 184 8 19 chr2 20675126 20675491 -232581092 + MLT1A1 LTR MaLR 3 363 -2 245 336 76 8 chr2 20676209 20676340 -232580243 + MIR3 SINE MIR 23 162 -46 3217 121 14 24 chr2 20676865 20677368 -232579215 - MER1A DNA MER1_type 0 529 32 2580 42 0 0 chr2 20677378 20677689 -232578894 - AluYa5 SINE Alu 0 311 1 360 0 0 0 chr2 20678441 20678481 -232578102 + (CA)n Simple_repeat Simple_repeat 2 41 0 267 250 40 48 chr2 20678593 20678717 -232577866 + MIR3 SINE MIR 68 190 -18 627 270 169 17 chr2 20679345 20679689 -232576894 + L1ME4a LINE L1 5721 6116 -5 22 0 0 0 chr2 20679689 20679711 -232576872 + AT_rich Low_complexity Low_complexity 1 22 0 2286 103 12 6 chr2 20680268 20680599 -232575984 + THE1B LTR MaLR 1 333 -31 958 50 0 0 chr2 20680599 20680720 -232575863 - AluY SINE Alu -1 310 190 4367 174 19 23 chr2 20681517 20682600 -232573983 + L1MB8 LINE L1 5098 6178 0 231 286 26 39 chr2 20682669 20682746 -232573837 + MIR SINE MIR 40 115 -93 444 301 173 9 chr2 20683350 20683574 -232573009 - MIR SINE MIR -11 251 1 3215 183 43 56 chr2 20684265 20685052 -232571531 - L1MB5 LINE L1 -13 6161 5385 5058 214 33 22 chr2 20685542 20685988 -232570595 - L1MB5 LINE L1 -744 5402 4962 2127 128 0 0 chr2 20685988 20686285 -232570298 - AluSx SINE Alu -15 297 1 5058 214 33 22 chr2 20686285 20687122 -232569461 - L1MB5 LINE L1 -1184 4962 4102 2328 88 3 0 chr2 20687122 20687429 -232569154 + AluSp SINE Alu 1 308 -5 5058 214 33 22 chr2 20687429 20687492 -232569091 - L1MB5 LINE L1 -2044 4102 4041 4449 142 21 27 chr2 20688873 20689619 -232566964 - L1MC1 LINE L1 0 6333 5592 1777 213 67 40 chr2 20689637 20690131 -232566452 - L1ME1 LINE L1 -7 6159 5653 895 224 25 0 chr2 20690859 20691060 -232565523 - MIR SINE MIR -2 260 55 2955 203 32 6 chr2 20691137 20691767 -232564816 - L1MB7 LINE L1 -9 6175 5530 1580 216 45 75 chr2 20692713 20693181 -232563402 + MLT1C LTR MaLR 6 459 -8 216 0 0 0 chr2 20696585 20696609 -232559974 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 272 380 51 28 chr2 20698423 20698639 -232557944 - MIR SINE MIR -27 235 15 421 294 28 0 chr2 20699017 20699160 -232557423 - MIR SINE MIR -59 203 57 285 321 83 13 chr2 20699394 20699589 -232556994 + MIR SINE MIR 13 212 -50 210 162 0 0 chr2 20700980 20701017 -232555566 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 433 269 52 0 chr2 20704566 20704700 -232551883 + L1ME3 LINE L1 6002 6142 -20 311 237 11 32 chr2 20705213 20705306 -232551277 - MIR SINE MIR -63 145 55 250 356 0 34 chr2 20705779 20705956 -232550627 + CT-rich Low_complexity Low_complexity 1 171 0 * 336 419 0 0 chr2 20705834 20706001 -232550582 + C-rich Low_complexity Low_complexity 1 167 0 792 209 36 52 chr2 20706102 20706351 -232550232 - L1ME1 LINE L1 -606 5568 5324 2117 113 0 7 chr2 20706358 20706658 -232549925 - AluSc SINE Alu -11 298 1 2196 112 0 7 chr2 20706660 20706963 -232549620 - AluY SINE Alu -10 301 1 382 207 190 17 chr2 20707422 20707538 -232549045 - MER5A DNA MER1_type -6 183 48 187 263 53 0 chr2 20707850 20707907 -232548676 + MER5A DNA MER1_type 78 137 -52 401 150 0 0 chr2 20709178 20709238 -232547345 + AluS SINE Alu 2 61 -257 1545 145 0 0 chr2 20709288 20709522 -232547061 + AluSg/x SINE Alu 67 300 -12 236 286 14 0 chr2 20709557 20709627 -232546956 - L2 LINE L2 -178 3094 3024 1717 153 19 26 chr2 20711125 20711438 -232545145 - AluJo SINE Alu -1 311 1 1948 156 0 9 chr2 20712101 20712416 -232544167 + AluJb SINE Alu 1 312 0 1699 201 13 29 chr2 20712724 20713176 -232543407 + MER89 LTR ERV1 3 545 -14 323 310 101 0 chr2 20713903 20714059 -232542524 - MIR SINE MIR -49 159 23 218 242 30 136 chr2 20716166 20716298 -232540285 + MIR SINE MIR 53 170 -92 204 329 73 0 chr2 20716297 20716397 -232540186 + MIR SINE MIR 17 129 -79 * 592 229 68 36 chr2 20716462 20716654 -232539929 - MER112 DNA MER1_type -39 221 24 23 0 0 0 chr2 20716925 20716948 -232539635 + GC_rich Low_complexity Low_complexity 1 23 0 304 286 95 0 chr2 20717768 20717894 -232538689 - MIR SINE MIR -56 206 69 286 226 128 0 chr2 20719130 20719232 -232537351 + MER5C DNA MER1_type 2 116 -208 336 182 143 0 chr2 20719264 20719341 -232537242 + MER5C DNA MER1_type 233 320 -4 317 225 12 12 chr2 20719576 20719656 -232536927 - MIR SINE MIR -72 190 111 408 200 120 0 chr2 20720203 20720303 -232536280 - MIR SINE MIR -43 219 108 183 271 51 0 chr2 20722713 20722772 -232533811 - L2 LINE L2 -12 3301 3240 1741 150 0 36 chr2 20723537 20723844 -232532739 + AluJo SINE Alu 1 296 -16 394 326 190 14 chr2 20724106 20724538 -232532045 + L2 LINE L2 1991 2498 -816 484 270 172 34 chr2 20724825 20725121 -232531462 + L2 LINE L2 2915 3251 -21 295 286 62 26 chr2 20726706 20726898 -232529685 - MIR SINE MIR -45 217 19 359 313 230 10 chr2 20727050 20727350 -232529233 + L2 LINE L2 876 1241 -2073 439 110 315 24 chr2 20727398 20727525 -232529058 + MER5A DNA MER1_type 5 168 -21 358 227 27 0 chr2 20727566 20727641 -232528942 - MER58B DNA MER1_type -8 333 257 2873 279 142 21 chr2 20727760 20729418 -232527165 + L2 LINE L2 1445 3309 -4 205 322 0 0 chr2 20729764 20729823 -232526760 - MIR3 SINE MIR -50 158 100 198 243 81 0 chr2 20730404 20730478 -232526105 + L2 LINE L2 3172 3251 -21 195 217 17 17 chr2 20730593 20730653 -232525930 + MIR SINE MIR 86 145 -117 405 344 119 19 chr2 20732688 20733118 -232523465 - L2 LINE L2 -665 2649 2177 212 238 38 95 chr2 20733952 20734057 -232522526 - L2 LINE L2 -182 3090 2992 1851 147 47 3 chr2 20734706 20735005 -232521578 - AluJo SINE Alu 0 312 1 266 240 19 39 chr2 20735168 20735272 -232521311 - L2 LINE L2 -1274 2040 1939 1962 159 88 11 chr2 20735303 20735738 -232520845 - MER31A LTR ERV1 -12 649 4 486 284 85 13 chr2 20735876 20736193 -232520390 - L1ME4a LINE L1 -13 6108 5769 264 266 63 25 chr2 20737031 20737189 -232519394 - L1ME4a LINE L1 -747 5399 5236 681 227 142 45 chr2 20737367 20737614 -232518969 - LTR16A LTR ERVL -118 332 62 1404 241 71 80 chr2 20737679 20737851 -232518732 - L1MC4 LINE L1 -72 7970 7798 2493 101 24 24 chr2 20737851 20738226 -232518357 - THE1C LTR MaLR 0 375 1 1404 241 71 80 chr2 20738226 20738329 -232518254 - L1MC4 LINE L1 -244 7798 7696 2669 19 0 13 chr2 20738329 20738643 -232517940 - AluYa5 SINE Alu -1 310 1 1404 241 71 80 chr2 20738643 20738988 -232517595 - L1MC4 LINE L1 -346 7696 7355 418 318 98 47 chr2 20738990 20739396 -232517187 - L1ME4a LINE L1 -951 5195 4769 322 287 24 37 chr2 20739969 20740133 -232516450 - L1ME LINE L1 -551 5570 5409 321 287 47 67 chr2 20740142 20740292 -232516291 - L3 LINE CR1 -820 757 611 222 37 0 0 chr2 20740822 20740849 -232515734 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 248 358 47 28 chr2 20741080 20741295 -232515288 - MIR SINE MIR -32 230 10 187 281 188 0 chr2 20742106 20742202 -232514381 - MIR SINE MIR -62 146 33 1477 155 45 31 chr2 20742783 20743074 -232513509 + AluJo SINE Alu 18 312 0 337 296 162 22 chr2 20743075 20743254 -232513329 + L3 LINE CR1 1374 1577 0 396 295 78 36 chr2 20744068 20744234 -232512349 + MIR SINE MIR 56 228 -34 252 276 0 0 chr2 20744824 20744882 -232511701 - MIR SINE MIR -57 151 94 26 0 0 0 chr2 20746996 20747022 -232509561 + GC_rich Low_complexity Low_complexity 1 26 0 234 0 0 0 chr2 20747154 20747180 -232509403 + (CGG)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr2 20747236 20747258 -232509325 + GC_rich Low_complexity Low_complexity 1 22 0 241 262 60 0 chr2 20749525 20749609 -232506974 + MIR3 SINE MIR 85 173 -35 27 49 0 0 chr2 20750851 20750892 -232505691 + GC_rich Low_complexity Low_complexity 1 41 0 181 222 0 0 chr2 20755396 20755432 -232501151 + L3b LINE CR1 1546 1581 -2 180 0 0 0 chr2 20757748 20757768 -232498815 + (CAG)n Simple_repeat Simple_repeat 3 22 0 1666 205 103 0 chr2 20762223 20762574 -232494009 - MSTD LTR MaLR 0 396 10 270 262 246 0 chr2 20762582 20762704 -232493879 + MIR SINE MIR 56 207 -55 331 255 129 20 chr2 20763569 20763739 -232492844 - MIR SINE MIR -14 248 43 21 0 0 0 chr2 20763817 20763838 -232492745 + AT_rich Low_complexity Low_complexity 1 21 0 1125 211 97 7 chr2 20763886 20764184 -232492399 - L1MC4 LINE L1 -135 7907 7583 711 176 7 37 chr2 20764185 20764321 -232492262 - FLAM_C SINE Alu -1 132 1 186 329 55 0 chr2 20767836 20767909 -232488674 - L2 LINE L2 0 3313 3237 277 370 109 18 chr2 20768039 20768369 -232488214 - L2 LINE L2 -338 2976 2617 2971 45 8 0 chr2 20768619 20768976 -232487607 - L1PA7 LINE L1 0 6154 5795 476 278 58 23 chr2 20770618 20770791 -232485792 - MIR SINE MIR -35 227 49 1606 189 10 7 chr2 20770947 20771254 -232485329 - AluJb SINE Alu -4 308 1 212 376 65 0 chr2 20771893 20771986 -232484597 - L2 LINE L2 -40 3232 3134 580 281 104 13 chr2 20772761 20772992 -232483591 + MIR SINE MIR 2 253 -9 436 245 71 92 chr2 20775183 20775228 -232481355 - MIR SINE MIR 0 262 218 2425 71 10 0 chr2 20775228 20775524 -232481059 - AluSg SINE Alu -10 300 2 436 245 71 92 chr2 20775524 20775752 -232480831 - MIR SINE MIR -44 218 9 458 292 118 40 chr2 20776606 20777106 -232479477 + L2 LINE L2 2003 2541 -773 652 221 96 0 chr2 20777535 20777743 -232478840 + Charlie4 DNA MER1_type 37 264 -1697 418 209 82 0 chr2 20777788 20777898 -232478685 + Charlie4 DNA MER1_type 1840 1958 -3 248 340 60 0 chr2 20777925 20778025 -232478558 - L2 LINE L2 0 3313 3208 2230 104 27 0 chr2 20778184 20778482 -232478101 + AluSg SINE Alu 1 306 -4 26 0 0 0 chr2 20778557 20778583 -232478000 + AT_rich Low_complexity Low_complexity 1 26 0 1163 197 75 7 chr2 20780419 20780714 -232475869 - MER33 DNA MER1_type -4 320 6 307 271 141 31 chr2 20782069 20782261 -232474322 - L1 LINE L1 -3784 2362 2150 2064 99 25 3 chr2 20782619 20782902 -232473681 - AluSp SINE Alu -24 289 1 416 273 85 62 chr2 20782950 20783372 -232473211 - HAL1 LINE L1 -6 2501 2070 744 277 155 40 chr2 20783598 20783927 -232472656 - L2 LINE L2 -1 3312 2946 288 294 116 22 chr2 20784199 20784474 -232472109 + L1ME4a LINE L1 5754 6054 -67 1268 267 134 45 chr2 20784512 20785385 -232471198 - HAL1 LINE L1 -423 2084 1134 885 194 55 20 chr2 20785688 20785889 -232470694 + MER3 DNA MER1_type 2 209 0 1072 209 7 62 chr2 20786412 20786685 -232469898 + L1MEc LINE L1 39 296 -6100 1805 213 25 64 chr2 20786692 20787255 -232469328 + MER74B LTR ERVL 59 599 -23 621 228 91 53 chr2 20787269 20787554 -232469029 + L1MEc LINE L1 296 591 -5805 3088 125 4 6 chr2 20787564 20788036 -232468547 + MER1A DNA MER1_type 56 526 -3 1351 213 18 3 chr2 20788041 20788369 -232468214 + L1MEc LINE L1 587 919 -5477 2924 168 45 24 chr2 20788369 20788815 -232467768 + L1MB7 LINE L1 4903 5338 -846 1993 137 55 3 chr2 20788815 20789158 -232467425 + MER46B DNA MER2_type 1 236 0 2924 168 45 24 chr2 20789158 20789674 -232466909 + L1MB7 LINE L1 5338 5894 -290 1435 264 42 28 chr2 20789677 20790320 -232466263 + L1M4 LINE L1 2954 3605 -2541 198 0 0 0 chr2 20790361 20790383 -232466200 + (TG)n Simple_repeat Simple_repeat 2 23 0 309 287 11 11 chr2 20790383 20790470 -232466113 + L1MC4 LINE L1 6618 6704 -1338 * 321 211 11 63 chr2 20790451 20790546 -232466037 - L1MC4 LINE L1 -1339 6703 6614 405 236 184 51 chr2 20790601 20790894 -232465689 + MLT1E2 LTR MaLR 1 332 -294 2313 58 11 0 chr2 20790898 20791175 -232465408 + AluY SINE Alu 17 296 -15 30017 89 13 8 chr2 20791195 20795667 -232460916 + L1PA6 LINE L1 11 4503 -1643 6803 51 0 0 chr2 20795667 20796496 -232460087 + L1PA6 LINE L1 5300 6135 -19 204 40 0 0 chr2 20796496 20796521 -232460062 + (TA)n Simple_repeat Simple_repeat 2 26 0 574 209 81 27 chr2 20796525 20796782 -232459801 + MLT1E2 LTR MaLR 326 503 -2 939 256 85 25 chr2 20796782 20797288 -232459295 + L1P5 LINE L1 4894 5431 -720 248 192 48 48 chr2 20797450 20797554 -232459029 + L1MA4 LINE L1 3224 3327 -4238 183 42 0 0 chr2 20797554 20797578 -232459005 + (TG)n Simple_repeat Simple_repeat 2 25 0 801 182 8 0 chr2 20797578 20797710 -232458873 - AluJb SINE Alu -28 284 152 14951 168 32 14 chr2 20797751 20801191 -232455392 + L1MA4 LINE L1 3344 6853 -743 822 117 8 0 chr2 20801191 20801318 -232455265 + L1PB1 LINE L1 6020 6148 -3 4566 144 30 20 chr2 20801352 20801869 -232454714 + L1MA4 LINE L1 6851 7382 -337 2196 82 13 20 chr2 20801869 20802173 -232454410 + AluSx SINE Alu 4 305 -7 4566 144 30 20 chr2 20802173 20802513 -232454070 + L1MA4 LINE L1 7382 7717 -2 1558 256 81 14 chr2 20802545 20803161 -232453422 + L1ME3A LINE L1 5434 6073 -97 22 56 0 0 chr2 20803228 20803264 -232453319 + AT_rich Low_complexity Low_complexity 1 36 0 296 301 75 53 chr2 20804109 20804242 -232452341 + L2 LINE L2 3137 3272 0 643 254 33 77 chr2 20805561 20805860 -232450723 + MLT1J LTR MaLR 224 509 -2 204 67 0 0 chr2 20806776 20806806 -232449777 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 757 183 7 0 chr2 20806867 20807004 -232449579 + FLAM_C SINE Alu 1 138 -5 27 29 0 0 chr2 20809180 20809214 -232447369 + AT_rich Low_complexity Low_complexity 1 34 0 830 131 21 0 chr2 20809420 20809565 -232447018 - L1MD1 LINE L1 -1 6635 6488 1091 147 0 18 chr2 20809576 20809739 -232446844 - FRAM SINE Alu -24 152 1 3200 149 7 4 chr2 20809751 20810307 -232446276 - L1MD1 LINE L1 -254 6382 5825 1328 229 12 114 chr2 20810320 20810918 -232445665 - L1MD1 LINE L1 -1059 5481 4945 1851 159 54 11 chr2 20810918 20811288 -232445295 + MSTA LTR MaLR 1 386 -42 2730 199 99 153 chr2 20811305 20812635 -232443948 - L1MD1 LINE L1 -1592 4948 3548 767 163 0 22 chr2 20812635 20812770 -232443813 - FLAM_C SINE Alu -6 137 6 2730 199 99 153 chr2 20812770 20813009 -232443574 - L1MD1 LINE L1 -2992 3548 3353 1634 175 11 14 chr2 20813009 20813170 -232443413 - AluJo SINE Alu -16 296 135 2128 131 0 13 chr2 20813170 20813476 -232443107 - AluJb SINE Alu -10 302 1 1634 175 11 14 chr2 20813476 20813599 -232442984 - AluJo SINE Alu -177 135 13 2730 199 99 153 chr2 20813599 20813783 -232442800 - L1MD1 LINE L1 -3187 3353 3161 6634 206 106 17 chr2 20813843 20815907 -232440676 - L1MD1 LINE L1 -3768 2772 348 2197 115 0 0 chr2 20815932 20816220 -232440363 + AluSx SINE Alu 1 288 -24 2822 164 54 5 chr2 20816252 20816807 -232439776 + MER34C LTR ERV1 4 585 0 1552 176 42 10 chr2 20816813 20817120 -232439463 - L1MD1 LINE L1 -6208 332 16 273 363 18 9 chr2 20817366 20817479 -232439104 - MIR3 SINE MIR -82 126 13 2988 122 69 29 chr2 20817502 20817744 -232438839 + MER41C LTR ERV1 3 234 -320 2125 113 0 0 chr2 20817744 20818063 -232438520 + AluSg SINE Alu 1 319 0 2988 122 69 29 chr2 20818063 20818342 -232438241 + MER41C LTR ERV1 234 546 -8 206 157 14 143 chr2 20818360 20818430 -232438153 + MIR3 SINE MIR 139 199 -9 585 203 171 6 chr2 20818796 20818954 -232437629 + MIR SINE MIR 40 223 -39 316 270 11 0 chr2 20819025 20819114 -232437469 - MIR SINE MIR -54 208 119 1428 158 17 8 chr2 20820140 20820380 -232436203 - AluJo SINE Alu -70 242 1 3014 175 35 13 chr2 20820382 20821295 -232435288 - L1MC1 LINE L1 -507 5826 4891 1913 175 25 35 chr2 20821296 20821731 -232434852 - L1MA7 LINE L1 -201 6090 5660 2378 241 22 10 chr2 20821754 20822538 -232434045 - L1MCa LINE L1 -3163 3263 2450 249 27 0 0 chr2 20822564 20822601 -232433982 - AluJb SINE Alu -2 300 264 1460 142 0 17 chr2 20822601 20822833 -232433750 - AluJb SINE Alu -84 228 1 2360 125 142 43 chr2 20822836 20823085 -232433498 - L1MCa LINE L1 -3973 2453 2230 864 0 0 0 chr2 20823085 20823184 -232433399 - L1PA2 LINE L1 0 6155 6057 2360 125 142 43 chr2 20823184 20823492 -232433091 - L1MCa LINE L1 -4196 2230 1841 * 6210 170 24 43 chr2 20823487 20824890 -232431693 - L1MCa LINE L1 -5048 1378 3 1298 241 29 26 chr2 20824878 20825259 -232431324 - L1ME LINE L1 -471 5699 5318 * 767 142 35 30 chr2 20825259 20825428 -232431155 + L1MA8 LINE L1 6117 6286 -5 558 329 62 22 chr2 20825546 20825868 -232430715 - L2 LINE L2 -132 3181 2847 387 271 101 12 chr2 20827533 20827729 -232428854 - MIR SINE MIR -16 246 1 571 250 47 0 chr2 20828811 20828939 -232427644 - L2 LINE L2 0 3272 3139 183 279 0 49 chr2 20829248 20829309 -232427274 - L2 LINE L2 -345 2968 2911 2160 140 0 0 chr2 20829792 20830092 -232426491 - AluSx SINE Alu -10 302 3 3064 117 45 0 chr2 20830450 20830921 -232425662 + L1PA16 LINE L1 5665 6156 -10 581 272 135 66 chr2 20831572 20831642 -232424941 + HAL1 LINE L1 984 1048 -1459 1985 157 0 19 chr2 20831642 20831960 -232424623 - AluJo SINE Alu 0 312 1 581 272 135 66 chr2 20831960 20832238 -232424345 + HAL1 LINE L1 1048 1356 -1151 401 215 11 11 chr2 20832246 20832339 -232424244 - MLT1C LTR MaLR 0 467 375 828 241 64 0 chr2 20832407 20832627 -232423956 - MLT1D LTR MaLR 0 505 272 330 67 0 0 chr2 20832736 20832781 -232423802 + (CAA)n Simple_repeat Simple_repeat 2 46 0 600 272 74 6 chr2 20833396 20833558 -232423025 + L2 LINE L2 2843 3015 -298 1965 244 71 62 chr2 20833604 20833975 -232422608 + L1MC4 LINE L1 6943 7309 -733 1977 136 6 43 chr2 20833975 20834298 -232422285 + AluSx SINE Alu 1 311 -1 1965 244 71 62 chr2 20834298 20834885 -232421698 + L1MC4 LINE L1 7309 7914 -128 390 21 0 0 chr2 20834885 20834932 -232421651 + (TG)n Simple_repeat Simple_repeat 2 48 0 1965 244 71 62 chr2 20834932 20835063 -232421520 + L1MC4 LINE L1 7914 8042 0 295 219 34 164 chr2 20835093 20835331 -232421252 + L2 LINE L2 3077 3283 -30 659 295 88 68 chr2 20835339 20835794 -232420789 + HAL1 LINE L1 349 794 -1713 2324 101 0 10 chr2 20835794 20836100 -232420483 - AluSx SINE Alu -9 303 1 659 295 88 68 chr2 20836100 20836552 -232420031 + HAL1 LINE L1 794 1274 -1233 349 258 61 8 chr2 20836601 20836733 -232419850 + HAL1 LINE L1 1388 1526 -981 2039 217 30 40 chr2 20837315 20837840 -232418743 + MLT2B1 LTR ERVL 1 520 0 441 328 36 36 chr2 20838027 20838277 -232418306 + L1MEd LINE L1 811 1060 -5059 2226 208 47 55 chr2 20840117 20840712 -232415871 - MLT1E LTR MaLR -3 590 1 21 36 0 0 chr2 20841034 20841062 -232415521 + AT_rich Low_complexity Low_complexity 1 28 0 195 289 13 40 chr2 20841211 20841287 -232415296 - L2 LINE L2 -184 3088 3015 525 220 8 8 chr2 20841436 20841568 -232415015 + L1PA16 LINE L1 6030 6161 -5 408 237 178 8 chr2 20841840 20842076 -232414507 - L1ME4a LINE L1 -245 5876 5601 586 197 146 0 chr2 20843137 20843274 -232413309 - MER5A DNA MER1_type -2 187 31 252 307 43 17 chr2 20844529 20844659 -232411924 + MIR SINE MIR 21 150 -63 219 285 111 35 chr2 20844922 20845066 -232411517 + L2 LINE L2 1587 1741 -1573 1232 250 122 47 chr2 20845239 20845755 -232410828 - MLT1H1 LTR MaLR 0 555 1 377 189 95 116 chr2 20845820 20846010 -232410573 + MER112 DNA MER1_type 2 187 -73 992 248 62 30 chr2 20846045 20846384 -232410199 + MLT1I LTR MaLR 60 409 0 6449 174 66 52 chr2 20846981 20848481 -232408102 + MER52A LTR ERV1 235 1755 0 288 284 80 0 chr2 20850794 20850882 -232405701 + MIR3 SINE MIR 108 202 -6 1641 229 96 43 chr2 20852443 20853006 -232403577 + MLT1E LTR MaLR 1 593 0 452 291 79 79 chr2 20853058 20853312 -232403271 - MIR SINE MIR 0 262 9 405 366 42 0 chr2 20853878 20854020 -232402563 + L2 LINE L2 3125 3272 0 236 316 18 0 chr2 20854151 20854208 -232402375 + L2 LINE L2 3242 3299 -14 508 339 44 24 chr2 20854994 20855242 -232401341 - MIR SINE MIR -9 253 1 1080 132 33 11 chr2 20855252 20855434 -232401149 - MER5A DNA MER1_type 0 189 4 310 325 139 71 chr2 20855587 20855839 -232400744 + L2 LINE L2 2954 3222 -50 213 244 0 0 chr2 20855873 20855918 -232400665 + MIR3 SINE MIR 153 197 -11 541 256 38 37 chr2 20856797 20856972 -232399611 + MIR SINE MIR 2 178 -63 2036 121 52 0 chr2 20857342 20857632 -232398951 - AluSx SINE Alu -7 305 1 921 146 0 0 chr2 20858004 20858141 -232398442 + LTR5 LTR ERVK 1 137 -832 204 159 0 23 chr2 20858845 20858889 -232397694 + (TA)n Simple_repeat Simple_repeat 1 43 0 1470 107 5 18 chr2 20859187 20859411 -232397172 + L1PA8A LINE L1 5909 6129 -2 21 57 0 0 chr2 20859694 20859729 -232396854 + AT_rich Low_complexity Low_complexity 1 35 0 28 0 0 0 chr2 20860157 20860185 -232396398 + AT_rich Low_complexity Low_complexity 1 28 0 1071 157 51 0 chr2 20862024 20862202 -232394381 + MER5A DNA MER1_type 3 189 0 558 219 51 0 chr2 20862299 20862436 -232394147 - L1MCb LINE L1 -2343 4221 4078 337 250 10 0 chr2 20862438 20862542 -232394041 - L1MCb LINE L1 -2660 3904 3800 3819 232 104 31 chr2 20862546 20863631 -232392952 - L1MCb LINE L1 -2803 3761 2756 1800 187 0 3 chr2 20863631 20863931 -232392652 - AluJb SINE Alu -13 299 1 3819 232 104 31 chr2 20863931 20864042 -232392541 - L1MCb LINE L1 -3808 2756 2654 1781 194 0 3 chr2 20864042 20864341 -232392242 + AluJb SINE Alu 1 298 -14 3819 232 104 31 chr2 20864341 20864521 -232392062 - L1MCb LINE L1 -3910 2654 2488 2072 139 0 7 chr2 20864521 20864830 -232391753 + AluJb SINE Alu 1 307 -5 3819 232 104 31 chr2 20864830 20866125 -232390458 - L1MCb LINE L1 -4076 2488 1288 2017 116 7 3 chr2 20866125 20866410 -232390173 - AluSx SINE Alu -26 286 1 3819 232 104 31 chr2 20866410 20867202 -232389381 - L1MCb LINE L1 -5276 1288 52 2079 158 7 0 chr2 20867202 20867512 -232389071 - AluSx SINE Alu 0 312 1 3819 232 104 31 chr2 20867512 20867568 -232389015 - L1MCb LINE L1 -6512 52 1 1175 181 93 41 chr2 20869073 20869416 -232387167 + MLT1A1 LTR MaLR 5 365 0 1682 116 154 7 chr2 20869574 20869866 -232386717 + MER1B DNA MER1_type 2 336 -1 252 309 57 57 chr2 20870394 20870588 -232385995 + L2 LINE L2 2634 2827 -487 1101 205 62 4 chr2 20871117 20871361 -232385222 + MIR SINE MIR 2 259 -3 247 304 40 20 chr2 20871642 20871790 -232384793 - L1P LINE L1 -1119 5027 4877 315 288 81 0 chr2 20871868 20871979 -232384604 - L1M4 LINE L1 -1355 4791 4672 27 49 0 0 chr2 20872054 20872095 -232384488 + AT_rich Low_complexity Low_complexity 1 41 0 763 178 100 33 chr2 20872180 20872360 -232384223 - MIR SINE MIR 0 262 71 201 269 19 0 chr2 20872531 20872583 -232384000 + MIR SINE MIR 208 260 -2 930 76 0 2 chr2 20872692 20872834 -232383749 + L1PA8 LINE L1 6015 6154 -14 475 278 223 4 chr2 20873011 20873284 -232383299 - L2 LINE L2 -14 3299 2967 382 357 66 0 chr2 20873437 20873619 -232382964 - L2 LINE L2 -428 2886 2693 2093 208 20 25 chr2 20873626 20873910 -232382673 + L1M4 LINE L1 3329 3613 -2533 2372 126 5 30 chr2 20873910 20874283 -232382300 - THE1B LTR MaLR 0 364 1 2093 208 20 25 chr2 20874283 20874589 -232381994 + L1M4 LINE L1 3613 3916 -2230 257 226 0 0 chr2 20874589 20874642 -232381941 + MER69 DNA AcHobo 624 676 -550 186 43 0 0 chr2 20875599 20875622 -232380961 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 342 0 0 0 chr2 20875866 20875904 -232380679 + (CA)n Simple_repeat Simple_repeat 1 38 0 298 296 17 26 chr2 20876033 20876148 -232380435 + L2 LINE L2 301 414 -2900 234 385 70 5 chr2 20876352 20876565 -232380018 + L2 LINE L2 584 810 -2504 643 200 107 0 chr2 20876571 20876721 -232379862 - MER5A DNA MER1_type -21 168 3 670 299 147 33 chr2 20877086 20877410 -232379173 + HAL1 LINE L1 427 713 -1794 652 204 9 0 chr2 20877410 20877523 -232379060 - MER81 DNA DNA 0 114 1 670 299 147 33 chr2 20877523 20877776 -232378807 + HAL1 LINE L1 713 1070 -1437 * 1503 234 168 44 chr2 20877773 20878472 -232378111 + HAL1 LINE L1 1315 2147 -360 316 40 40 0 chr2 20878472 20878522 -232378061 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 1503 234 168 44 chr2 20878522 20878701 -232377882 + HAL1 LINE L1 2147 2302 -205 810 101 0 0 chr2 20878703 20878812 -232377771 + AluSg/x SINE Alu 188 296 -16 227 175 52 103 chr2 20878820 20878861 -232377722 + HAL1 LINE L1 2306 2348 -159 1997 153 0 3 chr2 20878861 20879168 -232377415 + AluSx SINE Alu 1 306 -6 227 175 52 103 chr2 20879168 20879223 -232377360 + HAL1 LINE L1 2348 2397 -110 1474 149 20 92 chr2 20879266 20879656 -232376927 - L1MA4A LINE L1 -3 6300 5939 356 340 59 30 chr2 20880019 20880390 -232376193 + L1M4 LINE L1 4989 5370 -776 2170 115 3 16 chr2 20880534 20880848 -232375735 - AluY SINE Alu -1 310 1 349 287 108 54 chr2 20880912 20880998 -232375585 + L1ME4a LINE L1 5852 5932 -189 228 35 0 0 chr2 20880998 20881027 -232375556 + (CA)n Simple_repeat Simple_repeat 2 30 0 349 287 108 54 chr2 20881027 20881163 -232375420 + L1ME4a LINE L1 5932 6086 -35 387 60 0 0 chr2 20881849 20881899 -232374684 + (TG)n Simple_repeat Simple_repeat 1 50 0 303 222 56 78 chr2 20881900 20881990 -232374593 - L1MC4 LINE L1 -1341 6701 6614 2022 121 0 0 chr2 20882006 20882270 -232374313 - AluSx SINE Alu -48 264 1 740 193 47 18 chr2 20882700 20882871 -232373712 + LTR41 LTR ERVL 6 181 -592 1063 193 43 5 chr2 20882925 20883132 -232373451 + MER20 DNA MER1_type 1 215 -4 231 136 0 45 chr2 20883798 20883842 -232372741 + LTR41 LTR ERVL 731 772 -1 246 253 108 0 chr2 20884141 20884224 -232372359 + L1M4 LINE L1 5495 5586 -592 315 302 121 60 chr2 20884493 20884675 -232371908 - HAL1 LINE L1 -2314 193 1 26 0 0 0 chr2 20885803 20885829 -232370754 + AT_rich Low_complexity Low_complexity 1 26 0 25 31 0 0 chr2 20886592 20886624 -232369959 + AT_rich Low_complexity Low_complexity 1 32 0 3113 256 111 45 chr2 20886659 20887082 -232369501 + L1M4 LINE L1 2947 3341 -2805 183 42 0 0 chr2 20887082 20887106 -232369477 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3113 256 111 45 chr2 20887106 20888288 -232368295 + L1M4 LINE L1 3341 4444 -1702 2296 60 20 10 chr2 20888288 20888586 -232367997 + AluY SINE Alu 1 301 -10 3113 256 111 45 chr2 20888586 20889019 -232367564 + L1M4 LINE L1 4444 5135 -1011 2050 97 7 58 chr2 20889019 20889328 -232367255 + AluSc SINE Alu 2 294 -15 3113 256 111 45 chr2 20889328 20889423 -232367160 + L1M4 LINE L1 5135 5222 -924 195 184 0 0 chr2 20889426 20889464 -232367119 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 321 224 149 0 chr2 20889546 20889653 -232366930 + L1M LINE L1 5258 5380 -786 1535 237 117 28 chr2 20889906 20890503 -232366080 - MLT1G LTR MaLR 0 590 5 1846 146 48 13 chr2 20890608 20890924 -232365659 + MER1B DNA MER1_type 1 327 -12 2377 38 7 3 chr2 20890932 20891225 -232365358 - AluY SINE Alu -15 296 3 2312 77 3 3 chr2 20891395 20891694 -232364889 - AluY SINE Alu -12 299 1 811 198 21 103 chr2 20892744 20892987 -232363596 - MIR SINE MIR -20 242 20 567 281 90 31 chr2 20893246 20893907 -232362676 - L1MC4a LINE L1 -748 5398 5214 1425 163 0 4 chr2 20894361 20894588 -232361995 - AluJb SINE Alu -2 310 85 3511 235 84 19 chr2 20895010 20897276 -232359307 + L1MD2 LINE L1 1296 3718 -2822 401 202 155 8 chr2 20897390 20897519 -232359064 + L1MD2 LINE L1 4129 4276 -2264 2651 203 133 5 chr2 20897528 20898202 -232358381 + L1MD2 LINE L1 5992 6752 -1 21 36 0 0 chr2 20898203 20898231 -232358352 + AT_rich Low_complexity Low_complexity 1 28 0 13041 26 0 0 chr2 20899376 20901685 -232354898 + L1PA5 LINE L1 3838 6151 -3 24 0 0 0 chr2 20901741 20901765 -232354818 + AT_rich Low_complexity Low_complexity 1 24 0 2228 53 43 0 chr2 20902039 20902200 -232354383 - AluY SINE Alu -17 294 114 189 94 0 0 chr2 20902200 20902232 -232354351 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2228 53 43 0 chr2 20902232 20902352 -232354231 - AluY SINE Alu -197 114 1 1910 153 46 17 chr2 20903409 20903545 -232353038 - LTR23 LTR ERV1 0 467 336 2725 13 3 0 chr2 20903545 20903846 -232352737 - AluYb8 SINE Alu -3 315 14 1910 153 46 17 chr2 20903846 20904128 -232352455 - LTR23 LTR ERV1 -131 336 1 942 167 29 0 chr2 20904128 20904302 -232352281 + Tigger1 DNA MER2_type 2240 2418 0 566 189 68 74 chr2 20904307 20904497 -232352086 - MSTB2 LTR MaLR -57 400 212 1118 230 60 0 chr2 20904522 20904774 -232351809 - LTR39 LTR ERV1 0 783 517 2143 150 142 0 chr2 20904781 20905182 -232351401 + MER66B LTR ERV1 27 484 -2 2551 181 17 25 chr2 20905183 20905708 -232350875 - LTR39 LTR ERV1 -262 521 1 740 159 34 10 chr2 20905708 20905871 -232350712 - MSTB2 LTR MaLR -270 156 1 273 273 0 11 chr2 20905885 20905973 -232350610 + MLT1I LTR MaLR 323 409 0 2002 158 54 31 chr2 20906067 20906454 -232350129 - MSTC LTR MaLR 0 428 33 259 68 0 0 chr2 20906454 20906498 -232350085 + L1MA3 LINE L1 6262 6305 0 1795 186 34 44 chr2 20906538 20906974 -232349609 + MSTB1 LTR MaLR 1 432 0 308 111 0 19 chr2 20907020 20907074 -232349509 - MSTC LTR MaLR 0 428 376 718 152 0 146 chr2 20907110 20907239 -232349344 - AluJo SINE Alu -84 228 126 351 0 0 0 chr2 20907239 20907278 -232349305 + (CA)n Simple_repeat Simple_repeat 2 40 0 718 152 0 146 chr2 20907278 20907312 -232349271 - AluJo SINE Alu -186 126 89 566 132 0 115 chr2 20907331 20907370 -232349213 - MSTC LTR MaLR -36 392 350 2091 82 21 14 chr2 20907370 20907681 -232348902 + AluY SINE Alu 1 313 0 566 132 0 115 chr2 20907681 20907867 -232348716 - MSTC LTR MaLR -78 350 89 197 300 186 7 chr2 20908092 20908232 -232348351 - L2 LINE L2 -6 3307 3143 1136 217 112 42 chr2 20908277 20908798 -232347785 - MLT1F1 LTR MaLR 0 567 1 1399 212 10 10 chr2 20909090 20909382 -232347201 - AluJb SINE Alu -18 294 3 779 147 7 7 chr2 20909383 20909519 -232347064 - AluJb SINE Alu -176 136 1 1783 135 87 34 chr2 20909729 20909915 -232346668 + THE1C LTR MaLR 1 176 -199 243 0 0 0 chr2 20909915 20909942 -232346641 + (TC)n Simple_repeat Simple_repeat 1 27 0 1783 135 87 34 chr2 20909942 20910111 -232346472 + THE1C LTR MaLR 176 375 0 1550 191 62 0 chr2 20910311 20910584 -232345999 - AluJo SINE Alu -22 290 1 306 243 45 9 chr2 20910925 20911036 -232345547 + MLT1K LTR MaLR 466 580 -8 22 35 0 0 chr2 20912494 20912523 -232344060 + AT_rich Low_complexity Low_complexity 1 29 0 232 222 19 0 chr2 20912812 20912866 -232343717 + (TA)n Simple_repeat Simple_repeat 2 56 0 1136 197 13 21 chr2 20913328 20913562 -232343021 + MLT1D LTR MaLR 1 232 -273 774 182 28 93 chr2 20913567 20913781 -232342802 + MLT1D LTR MaLR 206 405 -100 1099 94 0 0 chr2 20913784 20913944 -232342639 + AluY SINE Alu 145 304 -7 556 139 9 37 chr2 20913945 20914053 -232342530 + MLT1D LTR MaLR 399 503 -2 23 68 0 0 chr2 20914355 20914399 -232342184 + AT_rich Low_complexity Low_complexity 1 44 0 961 139 12 0 chr2 20914457 20914630 -232341953 + C-rich Low_complexity Low_complexity 4 178 0 255 61 0 0 chr2 20914630 20914663 -232341920 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 520 199 42 12 chr2 20915490 20915656 -232340927 - L1MC5 LINE L1 -176 7785 7615 1397 203 75 7 chr2 20916145 20916426 -232340157 - AluJo SINE Alu -9 303 4 408 267 112 43 chr2 20916906 20917093 -232339490 - L1 LINE L1 -2368 3778 3579 2118 107 28 14 chr2 20917324 20917613 -232338970 - AluSc SINE Alu -16 293 1 745 272 18 9 chr2 20918101 20918318 -232338265 + MLT1I LTR MaLR 174 392 -17 24 53 0 0 chr2 20918494 20918532 -232338051 + AT_rich Low_complexity Low_complexity 1 38 0 3255 186 17 0 chr2 20918829 20919491 -232337092 + L1PB4 LINE L1 5482 6154 -2 296 109 0 0 chr2 20919514 20919560 -232337023 + L1MA3 LINE L1 5395 5440 -865 5655 106 8 17 chr2 20919595 20920479 -232336104 + L1MA3 LINE L1 5428 6303 -2 31 26 0 0 chr2 20920487 20920525 -232336058 + AT_rich Low_complexity Low_complexity 1 38 0 282 56 0 0 chr2 20921749 20921785 -232334798 + (TG)n Simple_repeat Simple_repeat 2 37 0 257 346 37 22 chr2 20921976 20922112 -232334471 + L2 LINE L2 2709 2846 -468 645 268 94 75 chr2 20922362 20922839 -232333744 + MLT1J LTR MaLR 26 511 0 1706 181 0 30 chr2 20922880 20923179 -232333404 - AluJb SINE Alu -18 294 5 338 132 0 19 chr2 20923928 20923981 -232332602 - MIR3 SINE MIR -30 178 127 24 0 0 0 chr2 20924047 20924071 -232332512 + AT_rich Low_complexity Low_complexity 1 24 0 227 231 77 0 chr2 20925181 20925246 -232331337 + LTR37A LTR ERV1 149 218 -208 1743 148 0 0 chr2 20926144 20926394 -232330189 + AluSq SINE Alu 1 250 -63 185 236 9 132 chr2 20926555 20926661 -232329922 - MIR SINE MIR -70 192 100 1665 186 30 19 chr2 20927931 20928296 -232328287 + MLT2D LTR ERVL 1 369 -45 1864 202 3 0 chr2 20928297 20928659 -232327924 + MER47A DNA MER2_type 2 364 -2 255 109 73 36 chr2 20928697 20928752 -232327831 + MLT2D LTR ERVL 464 520 0 1624 278 48 33 chr2 20928767 20929208 -232327375 - MLT1G1 LTR MaLR -2 593 160 2278 101 3 0 chr2 20929208 20929505 -232327078 - AluSx SINE Alu -14 298 1 1624 278 48 33 chr2 20929505 20929536 -232327047 - MLT1G1 LTR MaLR -435 160 131 497 205 180 12 chr2 20929536 20929697 -232326886 - MER53 DNA DNA 0 189 2 1624 278 48 33 chr2 20929697 20929803 -232326780 - MLT1G1 LTR MaLR -464 131 5 325 264 50 99 chr2 20929982 20930164 -232326419 - MLT1G1-int LTR MaLR -171 1200 1028 1515 150 124 4 chr2 20930597 20930863 -232325720 + AluJb SINE Alu 1 298 -14 1118 208 64 0 chr2 20930863 20931113 -232325470 + MER58B DNA MER1_type 76 341 0 769 220 55 48 chr2 20931673 20931977 -232324606 - MLT1C LTR MaLR -12 441 151 381 167 14 0 chr2 20931977 20932049 -232324534 + AluS SINE Alu 1 73 -230 788 157 15 82 chr2 20932168 20932436 -232324147 + L1MB8 LINE L1 5909 6158 -20 1901 162 0 3 chr2 20932436 20932745 -232323838 - AluSx SINE Alu -4 308 1 398 158 24 25 chr2 20932822 20932915 -232323668 - L1MB7 LINE L1 -122 6058 5959 * 5407 224 60 27 chr2 20932903 20934785 -232321798 - L1M4 LINE L1 -961 5421 3479 1584 221 71 30 chr2 20934785 20935387 -232321196 - L1M4 LINE L1 -3180 3202 2576 1387 215 6 0 chr2 20935460 20935795 -232320788 - L1 LINE L1 -1545 4601 4265 4695 157 56 10 chr2 20935796 20937139 -232319444 + L1PA16 LINE L1 4718 6156 -10 674 230 81 90 chr2 20937160 20937461 -232319122 - L1M4 LINE L1 -3910 2474 2179 1969 119 36 4 chr2 20937461 20937739 -232318844 - AluSx SINE Alu 0 312 26 674 230 81 90 chr2 20937739 20937994 -232318589 - L1M4 LINE L1 -4205 2179 1923 360 96 0 0 chr2 20938128 20938180 -232318403 + AluSg/x SINE Alu 215 266 -34 * 531 183 58 67 chr2 20938179 20938370 -232318213 - MLT1C LTR MaLR -300 205 7 649 272 55 1 chr2 20938388 20938622 -232317961 + MLT1G LTR MaLR 10 265 -290 688 216 115 32 chr2 20938730 20939008 -232317575 + MER33 DNA MER1_type 23 323 -1 255 284 0 0 chr2 20939280 20939353 -232317230 + MIR SINE MIR 47 119 -89 32 91 0 0 chr2 20939495 20939583 -232317000 + AT_rich Low_complexity Low_complexity 1 88 0 288 186 0 0 chr2 20939657 20939716 -232316867 + (TG)n Simple_repeat Simple_repeat 2 60 0 873 195 78 10 chr2 20941067 20941272 -232315311 + MER20 DNA MER1_type 1 219 0 618 210 0 29 chr2 20941288 20941426 -232315157 - FLAM_A SINE Alu -8 134 1 352 304 204 4 chr2 20944538 20944798 -232311785 - L2 LINE L2 -852 2462 2151 285 136 17 68 chr2 20944866 20944925 -232311658 + L2 LINE L2 3217 3272 0 220 349 113 33 chr2 20945590 20945802 -232310781 - L2 LINE L2 -191 3081 2853 21 57 0 0 chr2 20946040 20946075 -232310508 + AT_rich Low_complexity Low_complexity 1 35 0 263 361 23 15 chr2 20946164 20946294 -232310289 + MIR SINE MIR 19 149 -59 23 54 0 0 chr2 20948288 20948325 -232308258 + AT_rich Low_complexity Low_complexity 1 37 0 395 190 64 2 chr2 20948325 20948442 -232308141 - L1MA9 LINE L1 -7 6290 6166 2011 234 55 22 chr2 20948686 20949324 -232307259 + L1MC4 LINE L1 5254 5912 -1896 229 197 0 42 chr2 20949368 20949439 -232307144 + L1MC4 LINE L1 5894 5961 -1847 6098 156 23 6 chr2 20949577 20951467 -232305116 + L1PA15 LINE L1 4022 5945 -220 3046 267 82 18 chr2 20951593 20952976 -232303607 + L1MC4 LINE L1 6461 7931 -111 1678 182 54 99 chr2 20953018 20953146 -232303437 + MLT1C LTR MaLR 6 138 -329 1783 150 22 32 chr2 20953146 20953459 -232303124 - AluJb SINE Alu -2 310 1 1678 182 54 99 chr2 20953459 20953814 -232302769 + MLT1C LTR MaLR 138 467 0 295 135 14 94 chr2 20953829 20953924 -232302659 + L1MC4 LINE L1 7905 8041 -1 1035 129 20 0 chr2 20954000 20954147 -232302436 - AluSg SINE Alu -160 150 1 358 263 25 0 chr2 20954150 20954230 -232302353 - MER58B DNA MER1_type -259 82 1 411 186 17 8 chr2 20954759 20954877 -232301706 + (TA)n Simple_repeat Simple_repeat 1 119 0 4306 188 14 8 chr2 20954894 20955933 -232300650 - L1MB4 LINE L1 -18 6162 5111 333 0 0 0 chr2 20956646 20956683 -232299900 + (TG)n Simple_repeat Simple_repeat 1 37 0 365 256 194 8 chr2 20957483 20957612 -232298971 - MER5A DNA MER1_type -7 182 30 676 103 0 0 chr2 20957826 20957923 -232298660 + L1P LINE L1 2 98 -6048 * 1063 83 0 0 chr2 20957921 20958066 -232298517 + L1P LINE L1 623 767 -5379 * 28483 49 3 1 chr2 20958062 20961758 -232294825 - L1P LINE L1 -2442 3704 4 21 89 0 0 chr2 20961795 20961851 -232294732 + AT_rich Low_complexity Low_complexity 1 56 0 1964 144 3 31 chr2 20964226 20964650 -232291933 + L1MA1 LINE L1 5933 6345 0 314 243 10 29 chr2 20964869 20964963 -232291620 - MLT1I LTR MaLR 0 409 318 5879 168 217 26 chr2 20964963 20966408 -232290175 - MER52A LTR ERV1 0 1755 36 193 262 98 16 chr2 20967058 20967119 -232289464 + MIR SINE MIR 3 68 -194 2088 168 14 11 chr2 20967291 20967655 -232288928 + MLT1A1 LTR MaLR 1 365 0 219 297 16 0 chr2 20968602 20968666 -232287917 + (TAA)n Simple_repeat Simple_repeat 2 66 0 611 129 9 35 chr2 20969614 20969730 -232286853 - L1MB3 LINE L1 -10 6173 6061 303 357 119 16 chr2 20969736 20970055 -232286528 + L2 LINE L2 1837 2188 -1126 1825 129 63 33 chr2 20970553 20970607 -232285976 + THE1C LTR MaLR 1 52 -323 2095 117 63 26 chr2 20970607 20970958 -232285625 + THE1B LTR MaLR 1 364 0 1825 129 63 33 chr2 20970958 20971267 -232285316 + THE1C LTR MaLR 52 375 0 409 361 164 19 chr2 20971705 20971974 -232284609 + L2 LINE L2 2961 3268 -4 498 33 0 0 chr2 20972085 20972145 -232284438 + (TG)n Simple_repeat Simple_repeat 1 60 0 2474 143 30 7 chr2 20973141 20973569 -232283014 - L1PA16 LINE L1 0 6166 5729 2250 217 23 0 chr2 20973576 20974138 -232282445 + L1P LINE L1 4662 5236 -910 606 263 29 34 chr2 20974193 20974368 -232282215 + L2 LINE L2 2581 2754 -560 274 233 67 0 chr2 20974360 20974420 -232282163 - L2 LINE L2 0 3313 3250 * 245 314 41 8 chr2 20974507 20974628 -232281955 - L2 LINE L2 -276 3037 2913 476 157 231 0 chr2 20974630 20974751 -232281832 - L1MB7 LINE L1 -16 6168 6020 1419 144 0 26 chr2 20974751 20974872 -232281711 + L1MB8 LINE L1 5708 5831 -347 2442 34 41 0 chr2 20974872 20975165 -232281418 + AluY SINE Alu 1 305 -6 1419 144 0 26 chr2 20975165 20975307 -232281276 + L1MB8 LINE L1 5831 5964 -214 217 237 122 46 chr2 21178692 21178823 -232077760 - MIR3 SINE MIR -52 156 16 317 182 0 0 chr2 21178959 21179014 -232077569 + MER112 DNA MER1_type 10 64 -196 325 263 40 20 chr2 21180504 21180603 -232075980 + MLT1D LTR MaLR 237 337 -168 246 344 25 38 chr2 21181305 21181462 -232075121 + MIR3 SINE MIR 54 208 0 2070 122 0 0 chr2 21181789 21182084 -232074499 + AluSx SINE Alu 1 295 -17 1484 259 7 46 chr2 21183117 21183577 -232073006 + L2 LINE L2 2219 2660 -654 1121 167 5 56 chr2 21183583 21183799 -232072784 + MER20 DNA MER1_type 1 205 -14 1348 143 17 22 chr2 21183843 21184098 -232072485 - AluJo SINE Alu 0 312 68 557 331 68 24 chr2 21184098 21184608 -232071975 + L2 LINE L2 2699 3230 -83 199 297 38 15 chr2 21185559 21185609 -232070974 + MIR SINE MIR 40 87 -121 2745 13 0 0 chr2 21185609 21185920 -232070663 + AluYa5 SINE Alu 1 311 0 199 297 38 15 chr2 21185920 21185969 -232070614 + MIR SINE MIR 87 142 -66 661 268 25 0 chr2 21186861 21187018 -232069565 + MIR SINE MIR 42 202 -60 1972 149 3 0 chr2 21188422 21188731 -232067852 + AluSx SINE Alu 1 310 -2 1246 243 168 29 chr2 21188977 21189388 -232067195 - MLT1H LTR MaLR -45 504 1 191 200 31 108 chr2 21190174 21190239 -232066344 - L2 LINE L2 -1864 1450 1391 242 397 71 8 chr2 21190879 21191005 -232065578 - L2 LINE L2 -51 3221 3088 9291 33 0 0 chr2 21192823 21193908 -232062675 - L1P LINE L1 -1035 5111 4026 3377 34 5 5 chr2 21193908 21194316 -232062267 + L1PA5 LINE L1 5746 6153 -1 792 210 132 0 chr2 21194379 21194546 -232062037 + MER20 DNA MER1_type 1 189 -30 180 194 75 75 chr2 21195392 21195459 -232061124 + L2 LINE L2 3193 3259 -54 530 109 11 0 chr2 21195489 21195581 -232061002 + (TGGA)n Simple_repeat Simple_repeat 1 93 0 689 280 45 15 chr2 21197970 21198170 -232058413 + MIR SINE MIR 6 211 -51 2176 84 7 0 chr2 21198462 21198759 -232057824 + AluY SINE Alu 1 299 -12 203 121 121 24 chr2 21199476 21199559 -232057024 + (TGAA)n Simple_repeat Simple_repeat 3 93 0 183 42 0 0 chr2 21199900 21199924 -232056659 + (A)n Simple_repeat Simple_repeat 1 24 0 386 331 6 12 chr2 21200654 21200823 -232055760 + (TATG)n Simple_repeat Simple_repeat 2 169 0 294 247 260 20 chr2 21201271 21201417 -232055166 + MIR SINE MIR 75 255 -7 309 293 60 26 chr2 21201463 21201579 -232055004 + MIR SINE MIR 29 148 -114 193 281 61 49 chr2 21201717 21201799 -232054784 - MIR3 SINE MIR -19 189 107 705 279 42 9 chr2 21202380 21202595 -232053988 - MIR SINE MIR -21 241 20 362 227 0 0 chr2 21206285 21206360 -232050223 - L2 LINE L2 0 3272 3198 390 244 110 31 chr2 21206396 21206523 -232050060 - MIR3 SINE MIR -66 142 6 188 184 26 0 chr2 21206758 21206796 -232049787 - L2 LINE L2 -227 3045 3007 510 244 39 8 chr2 21208362 21208489 -232048094 - MIR SINE MIR -116 146 16 279 353 0 0 chr2 21208586 21208671 -232047912 + L2 LINE L2 3227 3311 -2 2123 110 3 3 chr2 21209056 21209365 -232047218 + AluSc SINE Alu 1 309 0 200 308 0 19 chr2 21209558 21209610 -232046973 - MIR SINE MIR -54 208 158 257 357 20 10 chr2 21209657 21209755 -232046828 - MIR SINE MIR -110 152 54 2340 113 132 5 chr2 21211747 21212126 -232044457 + MSTA LTR MaLR 2 428 0 233 278 56 44 chr2 21212587 21212677 -232043906 + L2 LINE L2 3173 3263 -9 352 358 12 24 chr2 21212788 21212953 -232043630 - MIR SINE MIR -57 205 43 279 203 0 0 chr2 21213395 21213454 -232043129 + (TCCA)n Simple_repeat Simple_repeat 4 62 0 166 63 0 0 chr2 21214424 21214723 -232041860 + AT_rich Low_complexity Low_complexity 1 299 0 278 205 29 29 chr2 21214730 21214901 -232041682 + (TTATA)n Simple_repeat Simple_repeat 1 171 0 49 0 0 0 chr2 21214901 21214950 -232041633 + AT_rich Low_complexity Low_complexity 1 49 0 185 178 22 0 chr2 21217325 21217370 -232039213 + GA-rich Low_complexity Low_complexity 3 48 0 212 321 152 49 chr2 21226506 21226730 -232029853 + L2 LINE L2 3021 3267 -5 620 278 45 20 chr2 21229465 21229663 -232026920 + MIR SINE MIR 52 254 -8 2388 99 0 0 chr2 21229709 21230002 -232026581 + AluSc SINE Alu 1 293 -16 2364 74 0 0 chr2 21230404 21230747 -232025836 + AluY SINE Alu 1 343 0 1017 286 97 3 chr2 21230943 21231303 -232025280 - L2 LINE L2 -30 3283 2890 1816 253 98 31 chr2 21231670 21232550 -232024033 + L2 LINE L2 2346 3293 -20 201 237 17 34 chr2 21232550 21232609 -232023974 + L2 LINE L2 3248 3305 -8 243 213 245 0 chr2 21233811 21233905 -232022678 - MIR SINE MIR -48 214 98 249 296 134 20 chr2 21234033 21234280 -232022303 + L2 LINE L2 1713 1987 -1327 649 328 131 25 chr2 21234547 21235628 -232020955 + L2 LINE L2 2014 3199 -73 1753 162 0 39 chr2 21235661 21235970 -232020613 - AluJo SINE Alu -15 297 1 25 31 0 0 chr2 21237828 21237860 -232018723 + AT_rich Low_complexity Low_complexity 1 32 0 1858 133 36 23 chr2 21238038 21238346 -232018237 + AluSx SINE Alu 1 312 0 270 236 236 9 chr2 21239441 21239547 -232017036 - MER5A DNA MER1_type -5 184 55 316 322 49 44 chr2 21239767 21239955 -232016628 - MIR SINE MIR -37 225 34 2191 122 0 7 chr2 21239955 21240250 -232016333 - AluSg SINE Alu -17 293 1 316 322 49 44 chr2 21240250 21240266 -232016317 - MIR SINE MIR -228 34 20 209 367 111 6 chr2 21240771 21240951 -232015632 - MIR SINE MIR -27 235 37 2511 62 0 7 chr2 21241009 21241315 -232015268 - AluY SINE Alu -7 304 1 2154 143 0 6 chr2 21242870 21243184 -232013399 + AluSx SINE Alu 1 312 0 281 87 0 22 chr2 21243184 21243230 -232013353 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 5032 167 10 9 chr2 21243783 21245312 -232011271 + L1PB4 LINE L1 4624 6156 0 1402 154 9 4 chr2 21245349 21245576 -232011007 + AluJb SINE Alu 85 312 0 273 271 58 58 chr2 21245636 21245824 -232010759 + L1MC4 LINE L1 7828 8015 -27 183 310 35 11 chr2 21246336 21246423 -232010160 + L2 LINE L2 2936 3024 -248 186 214 48 107 chr2 21247953 21248037 -232008546 + MIR SINE MIR 103 181 -81 2248 120 3 0 chr2 21252031 21252340 -232004243 - AluSx SINE Alu -2 310 1 587 295 77 49 chr2 21252526 21253105 -232003478 - L1ME4a LINE L1 -188 5933 5334 965 107 0 20 chr2 21253244 21253393 -232003190 + L1MA5A LINE L1 6150 6295 -2 2306 119 25 19 chr2 21253650 21254012 -232002571 + THE1B LTR MaLR 1 364 0 764 192 148 6 chr2 21255285 21255467 -232001116 + MER3 DNA MER1_type 1 208 -1 217 87 22 22 chr2 21257584 21257630 -231998953 + (CAG)n Simple_repeat Simple_repeat 1 46 0 2091 105 0 7 chr2 21259652 21259928 -231996655 - AluSg SINE Alu -8 302 29 270 0 0 0 chr2 21261011 21261041 -231995542 + (CA)n Simple_repeat Simple_repeat 1 30 0 289 270 43 0 chr2 21261823 21261938 -231994645 + MIR3 SINE MIR 85 204 -4 209 305 49 24 chr2 21262973 21263055 -231993528 - MIR3 SINE MIR -21 187 104 225 0 0 0 chr2 21263057 21263082 -231993501 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2242 117 0 7 chr2 21263205 21263512 -231993071 + AluSx SINE Alu 1 305 -7 2466 111 11 24 chr2 21263537 21263917 -231992666 - THE1C LTR MaLR 0 375 1 208 238 38 50 chr2 21264009 21264089 -231992494 - L3 LINE CR1 -1 1576 1498 4369 178 26 16 chr2 21264689 21265768 -231990815 - L1MB8 LINE L1 -104 6074 4975 277 377 9 0 chr2 21266867 21266981 -231989602 - MIR SINE MIR -124 138 24 341 141 14 0 chr2 21268008 21268079 -231988504 + CT-rich Low_complexity Low_complexity 1 72 0 732 167 0 0 chr2 21268252 21268366 -231988217 - MLT1B LTR MaLR -17 373 260 2107 111 18 0 chr2 21268393 21268707 -231987876 - AluSq SINE Alu 0 319 1 2034 110 48 6 chr2 21268864 21269200 -231987383 - L1MA5A LINE L1 -4 6293 5944 1465 161 17 0 chr2 21269201 21269435 -231987148 - MLT1B LTR MaLR -118 272 35 1497 177 123 24 chr2 21269435 21269774 -231986809 - MLT1A2 LTR MaLR 0 374 1 1071 232 25 4 chr2 21270656 21270936 -231985647 - L1M4 LINE L1 -3333 2813 2528 2131 109 39 0 chr2 21271176 21271461 -231985122 - AluSp SINE Alu -17 296 1 831 251 54 17 chr2 21271708 21271947 -231984636 + MIR SINE MIR 14 261 -1 2433 180 20 9 chr2 21273606 21274062 -231982521 + MER65C LTR ERV1 1 461 0 619 268 51 47 chr2 21274086 21274340 -231982243 + MIR SINE MIR 4 258 -4 394 157 0 36 chr2 21274519 21274602 -231981981 - MER116 DNA Mariner 0 80 1 1126 170 78 92 chr2 21275159 21275469 -231981114 + AluJb SINE Alu 6 311 0 960 133 0 0 chr2 21275725 21275905 -231980678 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 721 247 32 65 chr2 21276869 21277116 -231979467 + MIR SINE MIR 24 262 0 212 182 36 36 chr2 21277126 21277181 -231979402 + MIR SINE MIR 168 222 -40 1055 307 98 50 chr2 21277262 21278116 -231978467 + L2 LINE L2 1735 2629 -685 2610 188 35 16 chr2 21278989 21279538 -231977045 + L1MB1 LINE L1 5608 6166 -2 420 20 0 0 chr2 21281390 21281439 -231975144 + (T)n Simple_repeat Simple_repeat 1 49 0 703 259 41 25 chr2 21282364 21282607 -231973976 + MER112 DNA MER1_type 8 254 -6 2214 60 0 3 chr2 21283067 21283351 -231973232 - L1PA6 LINE L1 -7 6147 5865 542 245 216 5 chr2 21284772 21284976 -231971607 + MIR SINE MIR 16 262 0 339 294 231 6 chr2 21285065 21285225 -231971358 - MIR3 SINE MIR -7 201 6 195 42 0 0 chr2 21285344 21285368 -231971215 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 58 15 0 0 chr2 21285504 21285569 -231971014 + AT_rich Low_complexity Low_complexity 1 65 0 211 278 56 67 chr2 21285740 21285830 -231970753 - L2 LINE L2 -188 3084 2996 1939 144 6 72 chr2 21286104 21286465 -231970118 - MER1B DNA MER1_type 0 337 1 1860 198 39 8 chr2 21286700 21287318 -231969265 - L1M4 LINE L1 -596 5582 4945 1976 159 65 15 chr2 21287321 21287723 -231968860 - L1MC3 LINE L1 -6 7779 7358 3599 232 147 28 chr2 21287744 21287958 -231968625 - L1M4 LINE L1 -903 5243 5056 2072 138 3 0 chr2 21287958 21288256 -231968327 - AluSx SINE Alu -13 299 1 3599 232 147 28 chr2 21288256 21289447 -231967136 - L1M4 LINE L1 -1090 5056 3671 2571 246 31 12 chr2 21289443 21290123 -231966460 - L1MCb LINE L1 -5349 696 4 * 2666 216 53 3 chr2 21290136 21290783 -231965800 - L1M4 LINE L1 -1182 4964 4286 1642 176 26 57 chr2 21292085 21292471 -231964112 + MLT1A2 LTR MaLR 1 374 0 524 146 10 68 chr2 21292472 21292575 -231964008 + MLT1A2-int LTR MaLR 2 98 -1273 680 190 26 0 chr2 21292599 21292715 -231963868 - AluJo SINE Alu -178 134 16 4545 53 16 0 chr2 21292741 21293311 -231963272 - L1PA7 LINE L1 -7 6147 5569 6145 74 6 0 chr2 21293311 21294312 -231962271 + L1PA7 LINE L1 4553 5557 -597 247 88 0 0 chr2 21294309 21294343 -231962240 + MLT1A2-int LTR MaLR 82 115 -1620 * 2145 206 63 2 chr2 21294334 21294780 -231961803 + MLT1A2-int LTR MaLR 260 732 -639 2109 212 45 25 chr2 21295107 21295578 -231961005 + MLT1A2-int LTR MaLR 1256 1735 0 1131 207 61 105 chr2 21295578 21295969 -231960614 + MLT1A2 LTR MaLR 1 374 0 320 244 217 0 chr2 21295975 21296090 -231960493 - MIR SINE MIR -10 252 113 375 306 129 43 chr2 21296640 21296895 -231959688 - L1M4 LINE L1 -1082 5064 4788 402 343 18 11 chr2 21296918 21297094 -231959489 + MIR SINE MIR 6 179 -29 254 289 145 0 chr2 21297673 21297756 -231958827 - MIR SINE MIR -148 114 20 820 71 0 0 chr2 21297901 21298033 -231958550 + AluSp/q SINE Alu 188 319 0 735 309 134 31 chr2 21299313 21299896 -231956687 - L1MDa LINE L1 -3192 3348 2706 189 0 0 0 chr2 21300027 21300048 -231956535 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 620 112 0 0 chr2 21300050 21300139 -231956444 - AluSg/x SINE Alu -29 283 195 330 274 74 51 chr2 21300158 21300333 -231956250 - L1MDa LINE L1 -4012 2528 2350 2474 71 0 3 chr2 21300685 21300996 -231955587 + AluY SINE Alu 1 310 -1 361 298 30 34 chr2 21301014 21301249 -231955334 - HAL1 LINE L1 -849 1658 1425 563 288 82 88 chr2 21301255 21301880 -231954703 - HAL1 LINE L1 -1060 1447 827 394 347 72 7 chr2 21302478 21302755 -231953828 - L1M4 LINE L1 -846 5300 5006 456 266 101 14 chr2 21303107 21303293 -231953290 + MLT1J2 LTR MaLR 1 198 -248 2509 55 0 0 chr2 21303462 21303769 -231952814 - AluY SINE Alu -4 307 1 584 288 268 40 chr2 21303771 21304626 -231951957 - L1M4 LINE L1 -2137 4009 2960 585 283 33 11 chr2 21305664 21305848 -231950735 + MIR SINE MIR 74 261 -1 346 273 148 22 chr2 21305944 21306127 -231950456 - MIR SINE MIR -50 212 7 180 97 0 0 chr2 21306610 21306641 -231949942 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 3252 149 107 5 chr2 21306909 21307266 -231949317 - L1MB3 LINE L1 -7 6176 5857 264 100 0 0 chr2 21307266 21307306 -231949277 + (TG)n Simple_repeat Simple_repeat 1 40 0 3252 149 107 5 chr2 21307306 21307574 -231949009 - L1MB3 LINE L1 -326 5857 5487 324 345 21 27 chr2 21307658 21307824 -231948759 - MIR SINE MIR -53 209 42 262 299 75 27 chr2 21307934 21308081 -231948502 + L3b LINE CR1 1284 1437 -146 2290 84 0 29 chr2 21308537 21308847 -231947736 - AluSg SINE Alu -4 306 6 364 144 41 41 chr2 21309700 21309797 -231946786 - MIR3 SINE MIR 0 208 112 36 53 0 0 chr2 21310673 21310730 -231945853 + AT_rich Low_complexity Low_complexity 1 57 0 232 259 12 157 chr2 21312291 21312457 -231944126 - L2 LINE L2 -92 3180 3039 2983 159 30 14 chr2 21313617 21314189 -231942394 - L1MB8 LINE L1 0 6178 5598 576 222 44 116 chr2 21314540 21314652 -231941931 - MER3 DNA MER1_type 0 209 119 1618 187 13 32 chr2 21314652 21314968 -231941615 - AluJo SINE Alu -1 311 2 576 222 44 116 chr2 21314968 21315080 -231941503 - MER3 DNA MER1_type -90 119 1 357 205 26 13 chr2 21315096 21315174 -231941409 + MER20 DNA MER1_type 1 79 -140 2392 102 29 37 chr2 21315178 21315787 -231940796 - LTR12 LTR ERV1 0 714 348 1897 73 16 0 chr2 21315760 21316005 -231940578 - HERV9 LTR ERV1 -279 8120 7872 * 439 189 102 39 chr2 21316008 21316113 -231940470 + MER20 DNA MER1_type 84 200 -19 2265 215 118 35 chr2 21316113 21316876 -231939707 - LTR1B LTR ERV1 0 826 1 439 189 102 39 chr2 21316876 21316897 -231939686 + MER20 DNA MER1_type 200 218 -1 416 319 35 0 chr2 21316950 21317094 -231939489 - MER5B DNA MER1_type -29 149 1 403 207 129 26 chr2 21317855 21317971 -231938612 - L2 LINE L2 -3 3310 3183 211 147 0 0 chr2 21317981 21318015 -231938568 - L2 LINE L2 -15 3298 3265 235 225 82 16 chr2 21319036 21319218 -231937365 - L1M4 LINE L1 -2828 3318 3125 1732 206 5 29 chr2 21319223 21319607 -231936976 - L1ME1 LINE L1 -4 6231 5857 262 254 82 9 chr2 21319616 21319726 -231936857 - L1ME1 LINE L1 -1330 4885 4768 2079 104 13 7 chr2 21319743 21320042 -231936541 + AluSg SINE Alu 1 301 -9 3801 231 58 100 chr2 21320048 21320250 -231936333 - L1ME1 LINE L1 -1536 4679 4470 1905 136 35 0 chr2 21320250 21320536 -231936047 - AluSx SINE Alu -16 296 1 3801 231 58 100 chr2 21320536 21321634 -231934949 - L1ME1 LINE L1 -1745 4470 3328 2131 65 61 0 chr2 21321634 21321912 -231934671 - AluY SINE Alu -14 297 3 3801 231 58 100 chr2 21321912 21324195 -231932388 - L1ME1 LINE L1 -2887 3328 1275 1944 277 62 9 chr2 21324197 21325295 -231931288 - L1ME1 LINE L1 -5170 1226 35 470 260 91 69 chr2 21325303 21325765 -231930818 - L1M4 LINE L1 -3024 3122 2651 2018 128 11 0 chr2 21325845 21326153 -231930430 - AluSq SINE Alu 0 311 1 344 304 76 67 chr2 21326309 21326667 -231929916 - MLT1H LTR MaLR -34 375 47 22 0 0 0 chr2 21326723 21326745 -231929838 + AT_rich Low_complexity Low_complexity 1 22 0 545 264 51 76 chr2 21326761 21327037 -231929546 - L2 LINE L2 0 3313 3045 1126 253 50 13 chr2 21327126 21327427 -231929156 + MLT1H LTR MaLR 1 312 -237 273 235 0 15 chr2 21327993 21328061 -231928522 + HsTC2 DNA Tc2 14 80 -1818 327 366 143 7 chr2 21328136 21328409 -231928174 + L2 LINE L2 2963 3272 0 941 295 84 14 chr2 21328449 21328879 -231927704 - LTR40c LTR ERVL -5 460 1 2278 69 0 4 chr2 21329072 21329349 -231927234 - AluSc SINE Alu -19 290 15 2117 121 3 3 chr2 21330467 21330772 -231925811 + AluSq SINE Alu 1 305 -8 1564 136 19 87 chr2 21330993 21331303 -231925280 + AluJo SINE Alu 6 294 -18 333 0 0 0 chr2 21331444 21331481 -231925102 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 356 285 131 83 chr2 21331742 21332079 -231924504 - L1ME4a LINE L1 -289 5832 5480 532 226 166 42 chr2 21333176 21333393 -231923190 - Charlie2a DNA MER1_type -916 1946 1703 293 159 0 44 chr2 21333397 21333475 -231923108 - L1ME3A LINE L1 0 6162 6092 219 36 0 0 chr2 21333477 21333505 -231923078 + (TTG)n Simple_repeat Simple_repeat 3 30 0 622 283 25 89 chr2 21333558 21333670 -231922913 - Charlie2a DNA MER1_type -2444 338 220 2336 104 0 0 chr2 21333670 21333968 -231922615 - AluSx SINE Alu -14 298 1 622 283 25 89 chr2 21333968 21334215 -231922368 - Charlie2a DNA MER1_type -2562 220 2 257 300 0 0 chr2 21334227 21334287 -231922296 - L2 LINE L2 -224 3048 2989 1756 194 10 25 chr2 21334378 21334775 -231921808 - L1MA4 LINE L1 -935 5211 4821 * 1931 141 8 27 chr2 21334769 21335173 -231921410 + L1MA4 LINE L1 5215 5612 -688 566 167 0 0 chr2 21335173 21335280 -231921303 + L1MA4 LINE L1 6188 6295 -5 807 263 109 42 chr2 21335723 21336605 -231919978 + L1M4 LINE L1 2201 3141 -3005 285 158 0 0 chr2 21336927 21336997 -231919586 - L1MC4 LINE L1 0 8040 7927 565 256 23 6 chr2 21337009 21337181 -231919402 - L1MC4 LINE L1 -154 7888 7714 189 0 0 0 chr2 21338180 21338201 -231918382 + (TG)n Simple_repeat Simple_repeat 1 21 0 204 40 0 0 chr2 21338437 21338462 -231918121 + (TG)n Simple_repeat Simple_repeat 1 25 0 207 0 0 0 chr2 21338521 21338544 -231918039 + (TG)n Simple_repeat Simple_repeat 1 23 0 210 37 0 0 chr2 21339133 21339160 -231917423 + (TG)n Simple_repeat Simple_repeat 1 27 0 21 57 0 0 chr2 21339618 21339653 -231916930 + AT_rich Low_complexity Low_complexity 1 35 0 291 93 0 0 chr2 21339698 21339741 -231916842 + (TG)n Simple_repeat Simple_repeat 2 44 0 2834 224 62 37 chr2 21339749 21340068 -231916515 - L1ME1 LINE L1 -5 6161 5851 2090 93 4 0 chr2 21340068 21340347 -231916236 - AluSp SINE Alu -11 302 23 2834 224 62 37 chr2 21340347 21341605 -231914978 - L1ME1 LINE L1 -315 5851 4547 302 355 61 22 chr2 21341696 21341924 -231914659 - L1ME LINE L1 -459 5662 5426 2510 61 0 0 chr2 21342030 21342325 -231914258 - AluY SINE Alu -16 295 1 978 180 12 6 chr2 21342646 21342818 -231913765 - AluSc SINE Alu -16 293 121 1733 216 67 13 chr2 21342822 21343487 -231913096 - L1M4 LINE L1 -400 5778 5061 2164 137 103 5 chr2 21343487 21343875 -231912708 - MSTC LTR MaLR -2 426 1 1733 216 67 13 chr2 21343875 21343964 -231912619 - L1M4 LINE L1 -1117 5061 4978 513 207 0 0 chr2 21343965 21344052 -231912531 - Tigger5 DNA MER2_type 0 2323 2237 529 189 11 0 chr2 21344064 21344154 -231912429 + Tigger5 DNA MER2_type 2 92 -2231 302 176 0 0 chr2 21344211 21344262 -231912321 - Tigger5 DNA MER2_type -2271 52 2 554 160 42 17 chr2 21344264 21344383 -231912200 - L1M4 LINE L1 -1166 4980 4859 4841 205 100 10 chr2 21344385 21345624 -231910959 + Charlie1a DNA MER1_type 104 1454 -1 905 326 98 22 chr2 21345690 21345921 -231910662 - L2 LINE L2 -225 3088 2876 204 40 0 0 chr2 21345921 21345946 -231910637 + (TGG)n Simple_repeat Simple_repeat 1 25 0 905 326 98 22 chr2 21345946 21346309 -231910274 - L2 LINE L2 -437 2876 2434 27 0 0 0 chr2 21346377 21346404 -231910179 + AT_rich Low_complexity Low_complexity 1 27 0 1029 220 0 40 chr2 21346546 21346769 -231909814 - MER20 DNA MER1_type 0 219 6 1226 175 72 7 chr2 21347456 21347762 -231908821 + MER33 DNA MER1_type 1 317 -7 41 58 0 0 chr2 21347986 21348055 -231908528 + AT_rich Low_complexity Low_complexity 1 69 0 305 188 35 0 chr2 21348694 21348779 -231907804 + (TA)n Simple_repeat Simple_repeat 1 88 0 237 122 78 0 chr2 21348803 21348918 -231907665 + (TA)n Simple_repeat Simple_repeat 1 124 0 1055 315 71 40 chr2 21348997 21349702 -231906881 - ERVL LTR ERVL -1579 4185 3459 23 33 0 0 chr2 21351073 21351103 -231905480 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr2 21357899 21357929 -231898654 + AT_rich Low_complexity Low_complexity 1 30 0 474 252 0 0 chr2 21358282 21358385 -231898198 - MIR SINE MIR -3 259 157 245 312 95 12 chr2 21358876 21358983 -231897600 - MIR SINE MIR -85 123 38 682 213 11 44 chr2 21359606 21359789 -231896794 - MER5B DNA MER1_type 0 178 2 186 335 37 31 chr2 21360437 21360566 -231896017 - L2 LINE L2 -960 2354 2225 953 250 45 16 chr2 21360566 21360810 -231895773 + MIR SINE MIR 4 254 -8 312 118 52 46 chr2 21361130 21361283 -231895300 + (TA)n Simple_repeat Simple_repeat 1 154 0 358 136 34 0 chr2 21362756 21362815 -231893768 - Alu SINE Alu -1 300 240 1042 100 7 0 chr2 21362816 21362956 -231893627 - AluSq/x SINE Alu -170 143 3 2388 67 0 7 chr2 21363319 21363616 -231892967 - AluSg SINE Alu -15 295 1 6338 81 17 63 chr2 21364785 21365590 -231890993 - L1PA10 LINE L1 -3 6165 5376 2281 63 0 70 chr2 21365590 21365906 -231890677 - AluY SINE Alu -13 298 5 6338 81 17 63 chr2 21365906 21366099 -231890484 - L1PA10 LINE L1 -792 5376 5176 9152 130 15 6 chr2 21366103 21367574 -231889009 + L1PA10 LINE L1 3704 5187 -959 21 0 0 0 chr2 21367680 21367701 -231888882 + AT_rich Low_complexity Low_complexity 1 21 0 193 327 209 0 chr2 21367988 21368098 -231888485 - L2 LINE L2 -3 3269 3137 272 264 0 0 chr2 21368280 21368352 -231888231 - MLT2F LTR ERVL -590 73 2 291 348 28 0 chr2 21368355 21368496 -231888087 - HAL1 LINE L1 -861 1646 1502 612 303 122 36 chr2 21368623 21368760 -231887823 - L1MEd LINE L1 -4862 1257 1133 180 0 0 0 chr2 21368760 21368780 -231887803 + (TTA)n Simple_repeat Simple_repeat 3 22 0 612 303 122 36 chr2 21368780 21369339 -231887244 - L1MEd LINE L1 -4986 1133 501 188 75 0 50 chr2 21369367 21369407 -231887176 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 3640 202 71 11 chr2 21369654 21370365 -231886218 + L1MB7 LINE L1 5073 5864 -320 7213 133 42 24 chr2 21370365 21371143 -231885440 + HSMAR2 DNA Mariner 4 815 -487 180 0 0 0 chr2 21371143 21371163 -231885420 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 7213 133 42 24 chr2 21371163 21371660 -231884923 + HSMAR2 DNA Mariner 815 1302 0 3640 202 71 11 chr2 21371660 21372002 -231884581 + L1MB7 LINE L1 5864 6184 0 402 229 166 36 chr2 21372585 21372808 -231883775 - L1ME3A LINE L1 -301 5869 5618 282 333 119 6 chr2 21372837 21372996 -231883587 - LTR16C LTR ERVL -10 481 305 547 355 27 37 chr2 21373448 21373929 -231882654 - ERVL LTR ERVL -561 5203 4728 2311 103 3 0 chr2 21374073 21374374 -231882209 - AluSp SINE Alu -11 302 1 5818 170 26 126 chr2 21374790 21376269 -231880314 - MER52A LTR ERV1 0 1755 425 326 257 267 0 chr2 21376255 21376356 -231880227 - MER52A LTR ERV1 -1582 173 46 * 2527 99 8 11 chr2 21376506 21376869 -231879714 - THE1B LTR MaLR -2 362 1 344 300 35 117 chr2 21376946 21377349 -231879234 + L1M2 LINE L1 884 1253 -5596 882 260 91 33 chr2 21377860 21378221 -231878362 - L1M4 LINE L1 -2300 3846 3465 * 982 256 75 26 chr2 21378212 21378599 -231877984 - L1MB7 LINE L1 -95 6089 5684 23 54 0 0 chr2 21378922 21378959 -231877624 + AT_rich Low_complexity Low_complexity 1 37 0 375 263 161 7 chr2 21379949 21380086 -231876497 - L1MB7 LINE L1 -2154 5654 5497 450 324 45 14 chr2 21380165 21380523 -231876060 - L1MB7 LINE L1 -1980 4166 3798 729 276 75 48 chr2 21380690 21381192 -231875391 - L1ME3A LINE L1 -221 5949 5434 271 206 186 0 chr2 21381200 21381297 -231875286 - L1MC4 LINE L1 -2 8040 7926 301 227 0 0 chr2 21381355 21381421 -231875162 - L1MC4 LINE L1 -1337 6705 6640 378 275 99 6 chr2 21381422 21381604 -231874979 - L1MC4 LINE L1 -124 7918 7720 499 250 73 28 chr2 21381843 21382091 -231874492 - L1MEd LINE L1 -4874 1245 987 637 265 105 32 chr2 21382125 21382468 -231874115 - L1ME3A LINE L1 -1049 5097 4730 334 235 196 40 chr2 21382529 21382866 -231873717 - L1ME LINE L1 -514 5648 5259 408 236 94 0 chr2 21382871 21382998 -231873585 + MER3 DNA MER1_type 6 144 -65 3096 85 0 2 chr2 21383023 21383435 -231873148 - L1PB1 LINE L1 -69 6082 5672 * 4069 180 7 1 chr2 21383431 21384375 -231872208 - L1PB1 LINE L1 -714 5437 4488 282 122 0 0 chr2 21384390 21384439 -231872144 + MER3 DNA MER1_type 142 190 -19 2765 150 65 58 chr2 21384537 21385138 -231871445 + L1MA9 LINE L1 5324 5928 -384 817 279 107 23 chr2 21385139 21385486 -231871097 - MSTD LTR MaLR 0 396 21 905 207 7 14 chr2 21385488 21385687 -231870896 - MLT-int LTR MaLR -98 1580 1296 921 234 62 8 chr2 21385709 21385966 -231870617 - LTR56 LTR ERV1 0 445 175 3286 142 110 0 chr2 21385984 21386582 -231870001 - LTR51 LTR ERV1 0 671 8 1024 249 58 4 chr2 21386583 21386840 -231869743 - MST-int LTR MaLR -581 1070 800 1098 259 83 10 chr2 21386841 21387154 -231869429 + MLT-int LTR MaLR 504 839 -896 225 367 100 0 chr2 21387305 21387395 -231869188 + L2 LINE L2 3163 3261 -11 25 65 0 0 chr2 21387770 21387816 -231868767 + AT_rich Low_complexity Low_complexity 1 46 0 1043 215 33 0 chr2 21388040 21388254 -231868329 - AluJo SINE Alu -2 310 90 1402 287 129 24 chr2 21388464 21389410 -231867173 + L2 LINE L2 2241 3286 -27 1373 136 82 29 chr2 21391007 21391250 -231865333 + MER44D DNA MER2_type 1 526 -83 30 59 0 0 chr2 21391313 21391364 -231865219 + AT_rich Low_complexity Low_complexity 1 51 0 1176 165 5 0 chr2 21391427 21391615 -231864968 - MER2 DNA MER2_type -156 189 1 388 200 24 12 chr2 21391615 21391699 -231864884 + MER44D DNA MER2_type 519 603 -2 588 285 31 35 chr2 21392342 21392570 -231864013 - L2 LINE L2 0 3313 3087 363 314 45 6 chr2 21392617 21392773 -231863810 - L2 LINE L2 -708 2606 2445 1603 272 90 2 chr2 21393122 21393589 -231862994 + LTR33 LTR ERVL 1 508 -13 308 250 0 23 chr2 21393595 21393683 -231862900 - LTR67 LTR ERVL -14 543 458 180 0 0 0 chr2 21393857 21393877 -231862706 + (A)n Simple_repeat Simple_repeat 1 20 0 2864 307 56 37 chr2 21394316 21395808 -231860775 - ERVL LTR ERVL -339 5425 3906 1213 338 83 24 chr2 21395991 21396773 -231859810 - ERVL LTR ERVL -2657 2997 2170 1303 97 0 0 chr2 21396774 21396939 -231859644 + AluSp SINE Alu 136 300 -13 1012 326 96 42 chr2 21397186 21398180 -231858403 - ERVL LTR ERVL -3837 1927 881 513 0 0 0 chr2 21398779 21398836 -231857747 + (TA)n Simple_repeat Simple_repeat 2 58 0 366 98 0 0 chr2 21398837 21398888 -231857695 - Alu SINE Alu -250 51 1 407 337 112 6 chr2 21399288 21399466 -231857117 - LTR67 LTR ERVL -323 234 38 21 71 0 0 chr2 21399733 21399775 -231856808 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr2 21399846 21399867 -231856716 + AT_rich Low_complexity Low_complexity 1 21 0 219 317 93 6 chr2 21399965 21400126 -231856457 + L2 LINE L2 2026 2200 -1114 242 253 32 118 chr2 21400340 21400526 -231856057 + L2 LINE L2 2885 3054 -218 2235 128 122 8 chr2 21400700 21401084 -231855499 - MSTA LTR MaLR 0 428 1 31 0 0 0 chr2 21401183 21401214 -231855369 + AT_rich Low_complexity Low_complexity 1 31 0 20244 33 3 0 chr2 21401214 21401548 -231855035 - L1PA3 LINE L1 -2 6153 5821 1942 23 0 0 chr2 21401548 21401764 -231854819 - AluYb8 SINE Alu -3 315 100 20244 33 3 0 chr2 21401764 21404670 -231851913 - L1PA3 LINE L1 -334 5821 2918 21 0 0 0 chr2 21405178 21405199 -231851384 + AT_rich Low_complexity Low_complexity 1 21 0 626 118 10 0 chr2 21405448 21405550 -231851033 + (TCTCC)n Simple_repeat Simple_repeat 1 103 0 342 285 81 29 chr2 21406153 21406325 -231850258 + L2 LINE L2 2910 3090 -182 244 275 114 8 chr2 21406551 21406682 -231849901 + L1ME4a LINE L1 5782 5926 -195 424 226 20 20 chr2 21406995 21407097 -231849486 - MER96 DNA MER1_type? -11 164 63 263 236 31 39 chr2 21407568 21407695 -231848888 + L1 LINE L1 4733 4858 -1288 207 0 0 0 chr2 21407904 21407927 -231848656 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 324 0 0 0 chr2 21407926 21407962 -231848621 + (GA)n Simple_repeat Simple_repeat 2 37 0 1262 153 81 0 chr2 21407965 21408174 -231848409 - MLT1B LTR MaLR 0 390 165 2131 123 3 0 chr2 21408193 21408494 -231848089 + AluSc SINE Alu 8 309 0 216 0 0 0 chr2 21410177 21410201 -231846382 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 243 236 18 0 chr2 21410570 21410625 -231845958 + (TA)n Simple_repeat Simple_repeat 2 57 0 199 261 138 0 chr2 21411008 21411073 -231845510 - L2 LINE L2 -58 3255 3182 235 302 10 52 chr2 21414370 21414466 -231842117 - L1ME3A LINE L1 -115 6055 5964 473 187 24 8 chr2 21414639 21414762 -231841821 - L1MEc LINE L1 -2853 3362 3238 2044 258 55 20 chr2 21414776 21415846 -231840737 - L1MEc LINE L1 -3113 3102 2041 413 296 83 28 chr2 21416014 21416230 -231840353 - L1ME3A LINE L1 -255 5915 5688 264 224 13 0 chr2 21416281 21416357 -231840226 - L1M4 LINE L1 -3490 2656 2580 * 3318 258 36 25 chr2 21416356 21417471 -231839112 + L1M4 LINE L1 2437 3569 -2577 1847 175 7 0 chr2 21417471 21417779 -231838804 + AluSx SINE Alu 1 310 -2 3318 258 36 25 chr2 21417779 21417930 -231838653 + L1M4 LINE L1 3569 3717 -2429 477 262 9 0 chr2 21418613 21418720 -231837863 + MER81 DNA DNA 5 112 -2 1320 136 5 0 chr2 21419961 21420181 -231836402 - L1MA6 LINE L1 0 6300 6080 2290 138 11 16 chr2 21421109 21421486 -231835097 - THE1C LTR MaLR 0 375 1 1102 239 4 9 chr2 21422094 21422320 -231834263 - LTR40b LTR ERVL -15 447 223 399 218 99 0 chr2 21422331 21422432 -231834151 - MER45B DNA AcHobo 0 1040 930 252 174 0 0 chr2 21422426 21422472 -231834111 - MER45B DNA AcHobo -348 692 647 * 212 59 29 0 chr2 21422503 21422537 -231834046 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 44202 39 0 2 chr2 21422537 21428694 -231827889 - L1PA3 LINE L1 -6 6149 1 2702 219 37 44 chr2 21428700 21428796 -231827787 - MER45B DNA AcHobo -392 648 553 2329 102 0 6 chr2 21428796 21429109 -231827474 + AluSq SINE Alu 1 311 -2 2702 219 37 44 chr2 21429109 21429665 -231826918 - MER45B DNA AcHobo -487 553 1 935 247 27 14 chr2 21429671 21429894 -231826689 - LTR40c LTR ERVL -239 226 1 474 335 166 24 chr2 21430267 21430688 -231825895 - L2 LINE L2 -5 3308 2828 4027 156 33 4 chr2 21430710 21431474 -231825109 + L1MA4 LINE L1 5514 6299 -1 238 204 0 0 chr2 21431564 21431608 -231824975 + CT-rich Low_complexity Low_complexity 1 44 0 1881 245 103 45 chr2 21432741 21434267 -231822316 - L1MEc LINE L1 -3355 2860 1281 406 276 67 22 chr2 21435139 21435273 -231821310 + MIR3 SINE MIR 3 142 -66 21 0 0 0 chr2 21435292 21435313 -231821270 + AT_rich Low_complexity Low_complexity 1 21 0 338 267 24 15 chr2 21435324 21435460 -231821123 + L1MC4 LINE L1 1983 7011 -1311 1191 254 86 26 chr2 21436275 21436914 -231819669 - L2 LINE L2 0 3313 2631 613 262 47 31 chr2 21438230 21438443 -231818140 - MLT1J2 LTR MaLR -38 473 192 39 60 0 0 chr2 21438635 21438702 -231817881 + AT_rich Low_complexity Low_complexity 1 67 0 2530 49 0 10 chr2 21439110 21439416 -231817167 + AluY SINE Alu 1 303 -8 421 251 150 43 chr2 21440511 21440718 -231815865 + MIR SINE MIR 34 262 0 269 252 107 0 chr2 21441059 21441162 -231815421 - L1MC4a LINE L1 -1884 5924 5811 1219 231 37 27 chr2 21441184 21441560 -231815023 - L1MA9 LINE L1 -37 6275 5896 304 341 118 14 chr2 21441562 21441782 -231814801 - L1MC4a LINE L1 -1997 5811 5569 501 244 8 0 chr2 21442017 21442148 -231814435 + L1MD2 LINE L1 6209 6340 -19 213 324 62 41 chr2 21442411 21442556 -231814027 - MIR SINE MIR -55 207 60 351 356 111 6 chr2 21442817 21442997 -231813586 - MIR SINE MIR -18 244 46 458 311 128 32 chr2 21443511 21443730 -231812853 - MIR SINE MIR -6 256 17 183 382 146 0 chr2 21443982 21444126 -231812457 + L2 LINE L2 2172 2336 -978 450 331 163 11 chr2 21444160 21444528 -231812055 + L2 LINE L2 2458 2881 -433 321 321 54 68 chr2 21444534 21444755 -231811828 + L2 LINE L2 3046 3263 -9 397 232 86 21 chr2 21446115 21446291 -231810292 - MIR3 SINE MIR -66 142 9 409 267 15 133 chr2 21447173 21447368 -231809215 + MIR3 SINE MIR 19 190 -18 551 311 43 35 chr2 21447654 21448420 -231808163 - L1ME3A LINE L1 -213 5957 5186 1594 248 128 19 chr2 21448444 21448976 -231807607 + MLT1G1 LTR MaLR 1 590 -5 315 345 88 0 chr2 21449099 21449247 -231807336 - L1ME3A LINE L1 -1076 5070 4910 274 263 127 33 chr2 21449320 21449533 -231807050 - L1ME3A LINE L1 -1353 4793 4561 2341 244 75 24 chr2 21449636 21451084 -231805499 - L1ME2 LINE L1 -9 6155 4622 1604 188 79 3 chr2 21451184 21451524 -231805059 + MLT2C2 LTR ERVL 1 366 -98 288 89 44 0 chr2 21451627 21451672 -231804911 + MADE1 DNA Mariner 32 78 -2 978 290 107 0 chr2 21452792 21453102 -231803481 - L2 LINE L2 -2823 491 149 721 309 64 14 chr2 21453135 21453417 -231803166 + L2 LINE L2 2491 2786 -528 4420 206 21 14 chr2 21453423 21454694 -231801889 - L1PA13 LINE L1 -11 6152 4892 366 23 0 0 chr2 21454694 21454737 -231801846 + (TTA)n Simple_repeat Simple_repeat 3 45 0 3631 28 2 0 chr2 21454737 21455164 -231801419 - L1PA4 LINE L1 -18 6137 5710 4420 206 21 14 chr2 21455164 21455590 -231800993 - L1PA13 LINE L1 -1270 4893 4433 550 284 165 48 chr2 21455624 21456018 -231800565 + L2 LINE L2 2812 3251 -62 413 329 117 46 chr2 21457171 21457742 -231798841 + L1MC4a LINE L1 4551 5177 -969 195 265 0 0 chr2 21457753 21457802 -231798781 - L2 LINE L2 0 3313 3265 808 293 104 42 chr2 21457858 21458654 -231797929 + L1MC4a LINE L1 5270 6115 -6 2205 151 70 7 chr2 21460445 21460848 -231795735 - MSTA LTR MaLR 0 428 1 1721 264 12 0 chr2 21460970 21461391 -231795192 + MER20B DNA MER1_type 10 435 -348 454 189 154 0 chr2 21461442 21461611 -231794972 + MER20B DNA MER1_type 525 719 -64 886 211 11 5 chr2 21461988 21462173 -231794410 - MER5A DNA MER1_type -1 188 3 2129 92 0 3 chr2 21462353 21462664 -231793919 - AluY SINE Alu 0 310 1 349 309 83 31 chr2 21463544 21464001 -231792582 + L1M4 LINE L1 4172 4652 -1494 897 257 70 80 chr2 21464242 21464716 -231791867 - L2 LINE L2 -18 3295 2827 292 288 189 7 chr2 21469563 21469716 -231786867 + MIR SINE MIR 80 260 -2 180 423 0 0 chr2 21470773 21470870 -231785713 + L2 LINE L2 3168 3264 -8 594 212 7 55 chr2 21471111 21471257 -231785326 - MLT1A2 LTR MaLR 0 374 236 31 0 0 0 chr2 21471557 21471588 -231784995 + AT_rich Low_complexity Low_complexity 1 31 0 180 261 22 22 chr2 21471603 21471649 -231784934 + L3b LINE CR1 1280 1325 -258 379 311 39 0 chr2 21472200 21472303 -231784280 - MER91C DNA MER1_type 0 140 34 747 219 55 6 chr2 21473091 21473255 -231783328 + MER5A DNA MER1_type 18 189 0 593 152 152 22 chr2 21473272 21473410 -231783173 + MIR SINE MIR 41 196 -66 6885 133 25 44 chr2 21473706 21474973 -231781610 + THE1-int LTR MaLR 264 1505 -75 1438 40 0 0 chr2 21475073 21475246 -231781337 + AluY SINE Alu 137 309 -2 216 143 0 0 chr2 21476854 21476896 -231779687 + (A)n Simple_repeat Simple_repeat 1 42 0 1141 279 88 2 chr2 21477861 21478280 -231778303 + LTR40c LTR ERVL 1 455 -10 2236 99 3 48 chr2 21478634 21478947 -231777636 - AluSp SINE Alu -14 299 1 188 184 18 229 chr2 21479508 21479617 -231776966 - MIR3 SINE MIR -117 91 6 277 319 72 22 chr2 21479865 21480003 -231776580 + L2 LINE L2 2916 3060 -212 316 314 60 22 chr2 21480133 21480318 -231776265 + L2 LINE L2 2252 2443 -871 630 144 0 42 chr2 21480421 21480539 -231776044 - MLT1A1 LTR MaLR -252 113 1 277 274 27 0 chr2 21481385 21481458 -231775125 + MIR SINE MIR 118 192 -70 1002 224 12 10 chr2 21481602 21481855 -231774728 + MIR SINE MIR 3 259 -3 787 272 98 13 chr2 21481859 21482054 -231774529 - L1MD2 LINE L1 -10 6349 6117 378 0 0 0 chr2 21482054 21482096 -231774487 + (TG)n Simple_repeat Simple_repeat 2 43 0 787 272 98 13 chr2 21482096 21482205 -231774378 - L1MD2 LINE L1 -242 6117 6019 202 307 52 33 chr2 21482291 21482444 -231774139 + L3 LINE CR1 1420 1575 -2 251 111 0 0 chr2 21483612 21483648 -231772935 + MIR SINE MIR 111 146 -62 2359 30 0 0 chr2 21483945 21484209 -231772374 - AluY SINE Alu -17 294 31 417 328 119 42 chr2 21485826 21486186 -231770397 + L2 LINE L2 2833 3220 -52 211 311 0 0 chr2 21486806 21486867 -231769716 + MIR SINE MIR 83 143 -65 1776 62 0 0 chr2 21488588 21488818 -231767765 - AluY SINE Alu 0 311 82 550 270 97 44 chr2 21489498 21489746 -231766837 + LTR16A LTR ERVL 19 279 -171 451 313 0 8 chr2 21490018 21490152 -231766431 + MIR3 SINE MIR 9 141 -67 358 350 33 16 chr2 21491267 21491450 -231765133 - MER5A DNA MER1_type -3 186 1 437 230 75 68 chr2 21493100 21493261 -231763322 + MER63A DNA MER1_type 12 173 -37 317 296 15 61 chr2 21493664 21493796 -231762787 - MIR SINE MIR -63 145 20 2219 118 0 28 chr2 21494646 21494967 -231761616 + AluSx SINE Alu 1 312 0 264 122 0 0 chr2 21496861 21496902 -231759681 + (ATG)n Simple_repeat Simple_repeat 3 43 0 227 304 0 0 chr2 21498023 21498092 -231758491 + (TG)n Simple_repeat Simple_repeat 1 69 0 185 349 0 0 chr2 21498969 21499035 -231757548 + L2 LINE L2 3248 3313 0 339 269 40 51 chr2 21500110 21500293 -231756290 - MIR3 SINE MIR -59 149 6 2228 128 0 10 chr2 21501018 21501331 -231755252 - AluSx SINE Alu 0 312 3 702 175 6 11 chr2 21503288 21503352 -231753231 + (TG)n Simple_repeat Simple_repeat 1 64 -112 1838 199 15 0 chr2 21503352 21503693 -231752890 + MER7A DNA MER2_type 3 346 0 702 175 6 11 chr2 21503693 21503805 -231752778 + (TG)n Simple_repeat Simple_repeat 64 176 0 207 220 0 102 chr2 21504665 21504724 -231751859 + MIR SINE MIR 93 145 -117 328 259 0 0 chr2 21505802 21505883 -231750700 + MER112 DNA MER1_type 3 83 -177 257 277 71 9 chr2 21506038 21506150 -231750433 + MER112 DNA MER1_type 100 218 -42 2389 89 3 3 chr2 21506481 21506783 -231749800 + AluSg SINE Alu 1 302 -8 429 307 76 13 chr2 21506792 21507017 -231749566 - MIR SINE MIR -7 255 17 366 258 53 15 chr2 21507490 21507622 -231748961 + MIR SINE MIR 69 205 -57 21 36 0 0 chr2 21507622 21507650 -231748933 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr2 21511076 21511099 -231745484 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 21513501 21513523 -231743060 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 21514342 21514364 -231742219 + (TG)n Simple_repeat Simple_repeat 2 23 0 219 315 125 51 chr2 21514575 21514791 -231741792 + L2 LINE L2 3004 3235 -37 2028 216 49 70 chr2 21515904 21515964 -231740619 - MLT2B1 LTR ERVL 0 520 460 1277 219 4 4 chr2 21515964 21516202 -231740381 + MER8 DNA MER2_type 2 239 0 2028 216 49 70 chr2 21516202 21516670 -231739913 - MLT2B1 LTR ERVL -60 460 3 242 362 9 17 chr2 21519336 21519452 -231737131 + L2 LINE L2 3153 3267 -5 312 290 21 0 chr2 21520952 21521045 -231735538 + GA-rich Low_complexity Low_complexity 2 96 0 232 318 217 23 chr2 21521116 21521333 -231735250 - L2 LINE L2 -467 2847 2589 181 346 0 48 chr2 21521939 21522043 -231734540 - L2 LINE L2 -2915 399 301 672 292 92 49 chr2 21523144 21523535 -231733048 + HERV16 LTR ERVL 2 409 -4587 1008 296 60 82 chr2 21523639 21524584 -231731999 + HERV16 LTR ERVL 1760 2684 -2312 7086 184 47 11 chr2 21524588 21526184 -231730399 - Charlie5 DNA MER1_type 0 2624 972 762 160 8 0 chr2 21526201 21526326 -231730257 - FLAM_A SINE Alu -16 126 1 3796 213 31 26 chr2 21526326 21527182 -231729401 - Charlie5 DNA MER1_type -41 121 130 2226 88 7 3 chr2 21527182 21527476 -231729107 - AluY SINE Alu -16 295 1 3796 213 31 26 chr2 21527476 21527635 -231728948 - Charlie5 DNA MER1_type -31 131 1 2750 345 64 32 chr2 21527636 21529245 -231727338 + HERV16 LTR ERVL 2748 4408 -1356 1786 164 3 3 chr2 21529570 21529863 -231726720 - AluSx SINE Alu -14 298 6 221 276 149 45 chr2 21532705 21532839 -231723744 - MER5A DNA MER1_type -24 165 18 669 222 17 45 chr2 21532860 21533036 -231723547 + MIR SINE MIR 56 226 -36 24 0 0 0 chr2 21534680 21534704 -231721879 + AT_rich Low_complexity Low_complexity 1 24 0 229 328 35 60 chr2 21534736 21534852 -231721731 - L2 LINE L2 -22 3250 3138 243 0 0 0 chr2 21535226 21535253 -231721330 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 194 250 0 21 chr2 21535360 21535408 -231721175 + L2 LINE L2 3264 3310 -3 240 333 81 21 chr2 21536768 21536954 -231719629 + MIR3 SINE MIR 3 199 -9 196 361 111 19 chr2 21537468 21537676 -231718907 + L2 LINE L2 2428 2654 -660 1633 305 64 35 chr2 21538212 21539440 -231717143 - L1M4 LINE L1 -2752 3394 2131 1630 167 0 22 chr2 21539691 21539960 -231716623 - AluJo SINE Alu -49 263 1 1957 167 42 11 chr2 21540226 21540338 -231716245 - L1MB7 LINE L1 -11 6173 6066 4148 38 0 2 chr2 21540338 21540808 -231715775 - L1PA5 LINE L1 0 6154 5686 1957 167 42 11 chr2 21540808 21541073 -231715510 - L1MB7 LINE L1 -118 6066 5784 206 213 0 21 chr2 21542644 21542691 -231713892 + L2 LINE L2 3266 3311 -2 228 254 18 0 chr2 21542982 21543037 -231713546 + L2 LINE L2 3217 3272 0 2440 70 7 0 chr2 21543073 21543372 -231713211 + AluSx SINE Alu 11 311 -1 292 292 0 22 chr2 21543851 21543940 -231712643 + MER5B DNA MER1_type 82 168 -10 383 231 30 75 chr2 21543988 21544122 -231712461 + MER5A DNA MER1_type 57 184 -5 373 236 300 29 chr2 21544128 21544268 -231712315 - MER5B DNA MER1_type 0 178 1 242 328 82 0 chr2 21544463 21544585 -231711998 + L1ME4a LINE L1 4037 4168 -1978 351 165 101 0 chr2 21544622 21544701 -231711882 - L1MB8 LINE L1 -1 6177 6091 412 317 52 24 chr2 21544782 21544932 -231711651 + L1ME4a LINE L1 4265 4409 -1737 1948 149 3 13 chr2 21544932 21545247 -231711336 - AluJb SINE Alu 0 312 1 412 317 52 24 chr2 21545247 21545519 -231711064 + L1ME4a LINE L1 4409 4699 -1447 673 285 33 50 chr2 21545971 21546332 -231710251 + L1ME4a LINE L1 5501 5855 -266 1886 179 44 11 chr2 21547048 21547484 -231709099 + MER89 LTR ERV1 1 550 -9 1054 219 47 78 chr2 21547983 21548366 -231708217 + MLT2D LTR ERVL 1 371 -43 229 233 26 43 chr2 21548368 21548484 -231708099 + (TA)n Simple_repeat Simple_repeat 2 115 0 213 65 0 0 chr2 21549781 21549812 -231706771 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 247 265 94 34 chr2 21549934 21550051 -231706532 - L2 LINE L2 -208 3064 2941 416 261 92 76 chr2 21550886 21551124 -231705459 - L2 LINE L2 -2 3311 3070 1059 200 128 11 chr2 21551180 21551239 -231705344 - L1MB7 LINE L1 -16 6168 6117 2455 78 0 0 chr2 21551239 21551535 -231705048 - AluY SINE Alu -15 296 1 1059 200 128 11 chr2 21551535 21551740 -231704843 - L1MB7 LINE L1 -67 6117 5873 956 110 158 0 chr2 21551743 21551907 -231704676 + MER30 DNA MER1_type 1 190 -40 44469 41 6 1 chr2 21551908 21558044 -231698539 + L1PA4 LINE L1 2 6165 0 228 245 0 0 chr2 21558044 21558093 -231698490 + MER30 DNA MER1_type 182 230 0 2070 202 20 5 chr2 21558131 21558571 -231698012 - L1MB7 LINE L1 -365 5819 5373 928 235 151 10 chr2 21558553 21558851 -231697732 - L1MB7 LINE L1 -1743 4403 4064 * 617 274 50 17 chr2 21558986 21559227 -231697356 - L2 LINE L2 -1069 2245 1997 726 235 93 99 chr2 21560877 21561383 -231695200 + LTR33 LTR ERVL 4 506 -15 216 0 0 0 chr2 21562053 21562077 -231694506 + (T)n Simple_repeat Simple_repeat 1 24 0 259 328 15 0 chr2 21563648 21563715 -231692868 + MLT2F LTR ERVL 186 253 -410 469 312 42 33 chr2 21564638 21564853 -231691730 - MIR SINE MIR -20 242 26 194 105 26 0 chr2 21565080 21565118 -231691465 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 820 250 25 33 chr2 21565139 21565637 -231690946 - MLT2F LTR ERVL -57 606 6 2709 7 0 0 chr2 21565891 21566182 -231690401 + AluY SINE Alu 21 311 0 252 0 0 0 chr2 21569138 21569166 -231687417 + (TG)n Simple_repeat Simple_repeat 1 28 0 42 48 0 0 chr2 21569294 21569357 -231687226 + AT_rich Low_complexity Low_complexity 1 63 0 23 33 0 0 chr2 21569581 21569611 -231686972 + AT_rich Low_complexity Low_complexity 1 30 0 2521 124 21 24 chr2 21570215 21570594 -231685989 + MER83B LTR ERV1 1 378 0 358 305 89 32 chr2 21572279 21572469 -231684114 + MIR3 SINE MIR 3 203 -5 223 226 119 83 chr2 21572891 21572975 -231683608 - L3 LINE CR1 -1 1576 1490 487 241 171 6 chr2 21572976 21573134 -231683449 + MER5A DNA MER1_type 4 187 -2 194 318 32 0 chr2 21573134 21573196 -231683387 - L3 LINE CR1 -77 1500 1437 319 228 50 40 chr2 21573280 21573381 -231683202 - MIR SINE MIR -10 252 151 503 301 87 6 chr2 21573386 21573559 -231683024 - MIR SINE MIR -71 191 5 438 314 251 23 chr2 21573561 21574000 -231682583 - L3 LINE CR1 -201 1376 838 657 281 63 48 chr2 21574153 21574484 -231682099 - L3 LINE CR1 -758 819 484 2061 263 67 18 chr2 21574661 21575273 -231681310 - MLT2F LTR ERVL -6 657 16 2745 271 60 31 chr2 21575273 21576264 -231680319 - ERVL-F LTR ERVL -40 5724 4705 2113 220 72 28 chr2 21576240 21576327 -231680256 + ERVL LTR ERVL 2306 2388 -3376 * 2591 58 0 6 chr2 21576327 21576638 -231679945 - AluY SINE Alu -2 309 1 2113 220 72 28 chr2 21576638 21577081 -231679502 + ERVL LTR ERVL 2388 2859 -2905 206 214 376 34 chr2 21577320 21577437 -231679146 + MIR SINE MIR 48 204 -58 205 337 27 38 chr2 21577516 21577678 -231678905 - MIR SINE MIR -72 136 2 21 0 0 0 chr2 21577991 21578012 -231678571 + AT_rich Low_complexity Low_complexity 1 21 0 557 207 9 182 chr2 21578461 21578790 -231677793 - TAR1 Satellite telomeric -1831 280 9 * 3621 129 7 24 chr2 21578584 21578790 -231677793 - LTR60 LTR ERV1 -1 585 377 1695 246 55 66 chr2 21578790 21579408 -231677175 - LTR9 LTR ERV1 0 612 2 3621 129 7 24 chr2 21579408 21579796 -231676787 - LTR60 LTR ERV1 -209 377 1 272 310 120 21 chr2 21580199 21580341 -231676242 - MIR SINE MIR -44 218 63 280 300 0 0 chr2 21581094 21581174 -231675409 + MER116 DNA Mariner 1 80 0 433 202 0 45 chr2 21581191 21581280 -231675303 + L2 LINE L2 3229 3313 0 2166 126 0 0 chr2 21582403 21582496 -231674087 - AluSx SINE Alu 0 464 372 567 43 0 0 chr2 21582496 21582566 -231674017 + (TTCC)n Simple_repeat Simple_repeat 2 71 0 2166 126 0 0 chr2 21582566 21582867 -231673716 - AluSx SINE Alu -91 373 1 1554 291 59 12 chr2 21583255 21583749 -231672834 + MER69 DNA AcHobo 1 517 -709 1028 220 89 18 chr2 21583753 21584080 -231672503 + MER69 DNA AcHobo 2170 2519 -7 211 226 0 19 chr2 21584550 21584603 -231671980 + MIR SINE MIR 96 147 -115 440 214 12 23 chr2 21585760 21586020 -231670563 + CT-rich Low_complexity Low_complexity 1 257 0 210 245 113 0 chr2 21586062 21586115 -231670468 - L2 LINE L2 -35 3237 3179 558 0 0 0 chr2 21586756 21586818 -231669765 + (TA)n Simple_repeat Simple_repeat 1 62 0 418 287 61 49 chr2 21586879 21587043 -231669540 + MIR SINE MIR 15 180 -82 632 209 23 6 chr2 21587522 21587699 -231668884 + GA-rich Low_complexity Low_complexity 1 180 0 252 77 0 0 chr2 21588139 21588178 -231668405 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 604 254 136 40 chr2 21588551 21588779 -231667804 + MIR SINE MIR 13 262 0 223 404 22 7 chr2 21588944 21589080 -231667503 - L3 LINE CR1 -6 1571 1434 402 57 0 0 chr2 21589759 21589812 -231666771 + (CA)n Simple_repeat Simple_repeat 2 54 0 1969 122 0 4 chr2 21589832 21590111 -231666472 - AluSq SINE Alu 0 313 36 610 299 27 0 chr2 21590161 21590348 -231666235 - MIR SINE MIR -64 198 7 578 352 52 53 chr2 21590822 21591239 -231665344 + L2 LINE L2 2842 3255 -17 422 237 38 23 chr2 21591938 21592069 -231664514 + MER94 DNA DNA 1 133 -1 311 247 54 0 chr2 21592533 21592626 -231663957 + CT-rich Low_complexity Low_complexity 4 101 0 188 200 127 36 chr2 21594036 21594091 -231662492 - L2 LINE L2 -18 3254 3195 3035 68 11 0 chr2 21594093 21594444 -231662139 - THE1A LTR MaLR 0 355 1 10929 111 9 38 chr2 21594444 21596072 -231660511 - THE1A-int LTR MaLR 0 1580 1 2925 90 0 0 chr2 21596072 21596427 -231660156 - THE1A LTR MaLR 0 355 1 218 171 0 24 chr2 21596442 21596483 -231660100 - MER5B DNA MER1_type -17 161 122 4938 183 33 8 chr2 21596491 21598028 -231658555 + L1MB2 LINE L1 4564 6135 -36 183 246 49 16 chr2 21598100 21598161 -231658422 + MER5B DNA MER1_type 110 172 -6 246 206 109 33 chr2 21601494 21601586 -231654997 - MIR SINE MIR -80 182 84 2535 146 67 5 chr2 21601813 21602216 -231654367 + MSTA LTR MaLR 1 428 0 267 79 0 0 chr2 21602673 21602711 -231653872 + (TGGA)n Simple_repeat Simple_repeat 2 39 0 315 339 186 17 chr2 21603390 21603680 -231652903 + L3 LINE CR1 893 1233 -340 2181 135 3 0 chr2 21603680 21604013 -231652570 + AluSp SINE Alu 1 313 0 5105 232 42 38 chr2 21605112 21606544 -231650039 + L1MC4 LINE L1 6469 7906 -136 211 331 81 24 chr2 21606617 21606741 -231649842 + MER5A DNA MER1_type 59 189 0 426 314 160 0 chr2 21606749 21606905 -231649678 - MER5A DNA MER1_type 0 189 9 464 349 26 15 chr2 21607785 21608049 -231648534 - L1ME LINE L1 -414 5756 5490 181 280 20 0 chr2 21608057 21608107 -231648476 + MIR SINE MIR 190 240 -22 212 307 67 13 chr2 21608168 21608243 -231648340 + L2 LINE L2 3235 3313 0 289 235 128 2 chr2 21608278 21608372 -231648211 - MIR SINE MIR -75 133 30 295 320 58 17 chr2 21609464 21609636 -231646947 + MIR3 SINE MIR 27 205 -3 1361 198 116 15 chr2 21609789 21610117 -231646466 - MLT1A1 LTR MaLR 0 365 5 206 338 101 14 chr2 21610926 21611074 -231645509 - L3 LINE CR1 -12 1565 1405 212 250 0 0 chr2 21611558 21611606 -231644977 + (CA)n Simple_repeat Simple_repeat 2 49 0 275 306 225 0 chr2 21611878 21611989 -231644594 + MIR3 SINE MIR 54 189 -19 290 317 177 18 chr2 21612261 21612425 -231644158 + MIR3 SINE MIR 18 207 -1 328 297 24 36 chr2 21612567 21612732 -231643851 + LTR16A LTR ERVL 26 188 -262 1395 284 23 34 chr2 21612827 21613267 -231643316 + ERVL LTR ERVL 889 1323 -3673 697 339 16 41 chr2 21613406 21613769 -231642814 + ERVL LTR ERVL 4751 5104 -660 731 274 64 34 chr2 21614187 21614518 -231642065 + LTR16A LTR ERVL 87 447 -3 187 179 0 0 chr2 21614580 21614619 -231641964 + L2 LINE L2 3273 3311 -2 942 279 0 0 chr2 21614933 21615148 -231641435 - MER58A DNA MER1_type -1 223 9 291 328 172 20 chr2 21615533 21615731 -231640852 - L2 LINE L2 -454 2860 2633 * 460 270 15 71 chr2 21615729 21615925 -231640658 + L2 LINE L2 3125 3309 -4 822 175 8 0 chr2 21615972 21616092 -231640491 - FLAM_A SINE Alu -12 121 1 273 313 12 12 chr2 21616313 21616393 -231640190 + MIR SINE MIR 19 98 -110 192 273 0 36 chr2 21616447 21616502 -231640081 + L2 LINE L2 3213 3265 -7 195 325 100 50 chr2 21616659 21616779 -231639804 - L2 LINE L2 -43 3229 3104 911 221 72 0 chr2 21617179 21617374 -231639209 - MER63A DNA MER1_type -1 209 1 442 192 42 50 chr2 21617504 21617624 -231638959 - MER103 DNA DNA -31 135 17 531 209 28 73 chr2 21617646 21617755 -231638828 - MER5A DNA MER1_type -79 99 4 212 372 35 9 chr2 21619006 21619119 -231637464 + L2 LINE L2 3071 3186 -86 2271 159 40 3 chr2 21619149 21619501 -231637082 + MLT1A1 LTR MaLR 1 365 0 247 369 39 0 chr2 21619534 21619664 -231636919 - MIR SINE MIR -47 215 81 719 285 56 86 chr2 21620652 21621312 -231635271 - L2 LINE L2 -549 2765 2126 188 340 75 0 chr2 21621639 21621733 -231634850 - L2 LINE L2 -10 3303 3203 25 0 0 0 chr2 21621775 21621800 -231634783 + AT_rich Low_complexity Low_complexity 1 25 0 259 317 71 60 chr2 21621870 21622284 -231634299 - L2 LINE L2 -208 3064 2633 186 118 0 0 chr2 21622775 21622809 -231633774 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 769 283 19 21 chr2 21624634 21624871 -231631712 + LTR16A LTR ERVL 84 313 -137 1806 203 28 60 chr2 21625163 21625597 -231630986 - MLT1D LTR MaLR -77 428 9 207 146 0 0 chr2 21625896 21625937 -231630646 + (TC)n Simple_repeat Simple_repeat 2 42 0 1593 201 17 0 chr2 21626046 21626344 -231630239 + L1MA4 LINE L1 5991 6293 -7 2192 196 0 12 chr2 21629921 21629966 -231626617 - MLT2C1 LTR ERVL 0 397 353 2390 186 41 7 chr2 21629966 21630385 -231626198 + Tigger2a DNA MER2_type 1 433 -1 2192 196 0 12 chr2 21630385 21630741 -231625842 - MLT2C1 LTR ERVL -44 353 1 266 304 111 73 chr2 21630762 21631078 -231625505 + L2 LINE L2 2944 3271 -42 2473 138 22 5 chr2 21631636 21632005 -231624578 + THE1C LTR MaLR 1 375 0 22 0 0 0 chr2 21635025 21635047 -231621536 + AT_rich Low_complexity Low_complexity 1 22 0 522 278 92 12 chr2 21635075 21635248 -231621335 - MIR SINE MIR -56 206 20 248 351 9 0 chr2 21635815 21635926 -231620657 + G-rich Low_complexity Low_complexity 2 113 0 253 300 346 0 chr2 21636459 21636589 -231619994 - MER5A DNA MER1_type -14 175 1 1977 173 3 32 chr2 21638385 21638761 -231617822 + MLT1A1 LTR MaLR 1 365 0 264 302 91 104 chr2 21639012 21639463 -231617120 - L2 LINE L2 0 3272 2828 256 259 0 0 chr2 21640290 21640344 -231616239 + MIR3 SINE MIR 126 179 -29 247 246 0 0 chr2 21640719 21640776 -231615807 + GA-rich Low_complexity Low_complexity 2 58 0 577 164 0 9 chr2 21641254 21641364 -231615219 - MLT1D LTR MaLR -1 504 396 420 257 101 13 chr2 21641390 21641620 -231614963 + MER21B LTR ERV1 475 808 -123 719 134 24 8 chr2 21642013 21642140 -231614443 - MLT1D LTR MaLR -376 129 1 227 320 80 16 chr2 21642252 21642377 -231614206 + MIR3 SINE MIR 13 145 -63 304 232 14 0 chr2 21642415 21642484 -231614099 + L1ME4a LINE L1 1995 2064 -4362 205 288 0 0 chr2 21642486 21642545 -231614038 + (TA)n Simple_repeat Simple_repeat 2 60 0 649 244 61 50 chr2 21642680 21642860 -231613723 - MIR SINE MIR -73 189 8 181 330 154 0 chr2 21643293 21643384 -231613199 + MIR SINE MIR 48 152 -110 1880 154 44 44 chr2 21644632 21645022 -231611561 + MLT1B LTR MaLR 1 390 0 204 288 14 14 chr2 21645219 21645292 -231611291 + CT-rich Low_complexity Low_complexity 3 75 0 21 57 0 0 chr2 21646320 21646355 -231610228 + AT_rich Low_complexity Low_complexity 1 35 0 2119 141 0 0 chr2 21646604 21646936 -231609647 + AluSc SINE Alu 1 309 0 23 33 0 0 chr2 21647408 21647438 -231609145 + AT_rich Low_complexity Low_complexity 1 30 0 556 302 37 20 chr2 21648187 21648407 -231608176 + MIR SINE MIR 34 250 -12 2224 92 0 7 chr2 21648710 21649003 -231607580 - AluSp SINE Alu -22 291 1 488 295 89 35 chr2 21649111 21649543 -231607040 + L1ME4a LINE L1 2360 2777 -3649 2350 115 31 14 chr2 21650351 21650708 -231605875 + THE1B LTR MaLR 2 364 0 22 0 0 0 chr2 21650718 21650740 -231605843 + AT_rich Low_complexity Low_complexity 1 22 0 367 353 15 50 chr2 21650903 21651229 -231605354 + L1ME4a LINE L1 4855 5178 -1248 2419 119 19 11 chr2 21651327 21651697 -231604886 + THE1C LTR MaLR 1 373 -2 353 243 94 116 chr2 21651759 21652230 -231604353 + L1ME4a LINE L1 5911 6372 -29 2133 155 11 41 chr2 21652230 21652668 -231603915 - L1PB4 LINE L1 -2 6154 5730 353 243 94 116 chr2 21652668 21652698 -231603885 + L1ME4a LINE L1 6372 6401 0 275 204 133 0 chr2 21652984 21653097 -231603486 - L1MC4a LINE L1 -1911 5897 5770 337 306 111 41 chr2 21653177 21653489 -231603094 - L1MC4a LINE L1 -472 5649 5305 792 295 87 55 chr2 21653839 21654103 -231602480 - L1MC4a LINE L1 -1369 4777 4523 2541 110 3 18 chr2 21654103 21654484 -231602099 + THE1C LTR MaLR 1 375 0 792 295 87 55 chr2 21654484 21655003 -231601580 - L1MC4a LINE L1 -1623 4523 3969 2164 111 0 26 chr2 21655343 21655650 -231600933 - AluSg SINE Alu -11 299 1 366 325 41 38 chr2 21657053 21657256 -231599327 - MIR SINE MIR -53 155 1 329 188 102 7 chr2 21658375 21658523 -231598060 + L1MC4 LINE L1 7631 7901 -141 2786 145 75 9 chr2 21658562 21659106 -231597477 + L1MA4 LINE L1 5717 6296 -4 23 0 0 0 chr2 21659145 21659168 -231597415 + AT_rich Low_complexity Low_complexity 1 23 0 568 184 153 55 chr2 21659239 21659378 -231597205 + MER5A DNA MER1_type 9 168 -21 1397 197 51 46 chr2 21659378 21659748 -231596835 + MLT1A2 LTR MaLR 1 372 -2 568 184 153 55 chr2 21659748 21659771 -231596812 + MER5A DNA MER1_type 168 187 -2 180 306 82 12 chr2 21659865 21659950 -231596633 + L2 LINE L2 2879 2969 -303 316 310 23 0 chr2 21660464 21660551 -231596032 - MER5B DNA MER1_type 0 178 90 2184 70 0 4 chr2 21660564 21660834 -231595749 + AluY SINE Alu 40 308 -3 253 288 24 64 chr2 21660834 21660959 -231595624 - MER5B DNA MER1_type -54 124 5 210 350 81 12 chr2 21661327 21661487 -231595096 + L2 LINE L2 2065 2235 -1079 1278 233 158 2 chr2 21661487 21661891 -231594692 - MLT1C LTR MaLR 0 467 1 627 317 68 77 chr2 21661893 21662955 -231593628 + L2 LINE L2 2233 3270 -2 278 302 47 0 chr2 21662974 21663060 -231593523 + L2 LINE L2 3219 3308 -5 224 295 66 33 chr2 21663591 21663713 -231592870 - MIR SINE MIR -50 212 87 610 343 38 4 chr2 21663954 21664190 -231592393 - MIR SINE MIR -17 245 2 533 279 101 22 chr2 21666796 21666975 -231589608 + MIR SINE MIR 5 197 -65 299 315 93 9 chr2 21667195 21667303 -231589280 - L2 LINE L2 -14 3299 3183 23 0 0 0 chr2 21670736 21670759 -231585824 + AT_rich Low_complexity Low_complexity 1 23 0 268 400 9 0 chr2 21670896 21671006 -231585577 + L2 LINE L2 3158 3268 -4 189 0 0 0 chr2 21671832 21671853 -231584730 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 210 143 0 0 chr2 21672081 21672116 -231584467 + (T)n Simple_repeat Simple_repeat 1 35 0 195 42 0 0 chr2 21672608 21672632 -231583951 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 225 259 19 0 chr2 21672637 21672691 -231583892 + CT-rich Low_complexity Low_complexity 2 56 0 2365 252 61 18 chr2 21672693 21673304 -231583279 - L1ME2 LINE L1 -12 6947 6364 189 0 0 0 chr2 21673304 21673325 -231583258 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2365 252 61 18 chr2 21673325 21674115 -231582468 - L1ME2 LINE L1 -595 6364 5493 436 227 97 11 chr2 21674135 21674311 -231582272 - L1MC4a LINE L1 0 7808 7618 458 257 80 53 chr2 21674448 21674860 -231581723 - L1ME2 LINE L1 -4738 2384 1962 342 262 99 28 chr2 21674941 21675082 -231581501 - L1ME2 LINE L1 -5214 1908 1758 428 317 35 7 chr2 21675095 21675441 -231581142 - L1ME2 LINE L1 -4867 1555 1199 300 27 0 0 chr2 21675887 21675924 -231580659 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 2226 132 33 33 chr2 21677281 21677705 -231578878 - L1MA7 LINE L1 -4 6287 5864 245 294 88 69 chr2 21678197 21678357 -231578226 + MER5A DNA MER1_type 2 164 -25 875 218 6 35 chr2 21678397 21678567 -231578016 - MER5A DNA MER1_type -10 179 15 225 313 0 18 chr2 21678849 21678961 -231577622 + MARNA DNA Mariner 400 509 -77 842 209 0 23 chr2 21679008 21679185 -231577398 - MER97c DNA MER1_type? -915 175 3 183 200 0 0 chr2 21679280 21679315 -231577268 - L3b LINE CR1 -127 1456 1422 415 242 177 27 chr2 21680004 21680190 -231576393 - MLT1H LTR MaLR 0 549 336 808 249 9 24 chr2 21680246 21680459 -231576124 - MLT1H LTR MaLR -328 221 12 233 307 43 93 chr2 21680585 21680725 -231575858 - L2 LINE L2 -18 3254 3122 2172 113 0 0 chr2 21680812 21681103 -231575480 + AluSc SINE Alu 5 295 -14 401 354 28 11 chr2 21682018 21682196 -231574387 + MIR SINE MIR 2 182 -80 2994 133 24 43 chr2 21682212 21682792 -231573791 + LTR24B LTR ERV1 1 569 -7 244 191 0 0 chr2 21682796 21682838 -231573745 + MIR SINE MIR 210 251 -11 323 292 47 68 chr2 21683699 21683891 -231572692 - MER5A DNA MER1_type -1 188 1 2263 205 16 24 chr2 21683908 21684396 -231572187 - LTR42 LTR ERVL -18 477 3 234 0 0 0 chr2 21685303 21685329 -231571254 + (T)n Simple_repeat Simple_repeat 1 26 0 2199 120 0 0 chr2 21686925 21687217 -231569366 + AluSc SINE Alu 1 292 -17 304 298 0 0 chr2 21688256 21688340 -231568243 - MIR SINE MIR -84 178 95 22 56 0 0 chr2 21688918 21688954 -231567629 + AT_rich Low_complexity Low_complexity 1 36 0 669 287 19 3 chr2 21688960 21689281 -231567302 + L1MC/D LINE L1 4378 4703 -1443 1027 168 59 49 chr2 21689331 21689617 -231566966 - MER33 DNA MER1_type 0 324 36 711 284 65 64 chr2 21689639 21690338 -231566245 + L1MC/D LINE L1 4745 5447 -761 6789 65 38 9 chr2 21690338 21691519 -231565064 - L1PA8 LINE L1 -13 6159 4968 711 284 65 64 chr2 21691519 21691714 -231564869 + L1MC/D LINE L1 5447 5640 -568 894 142 0 0 chr2 21691842 21691969 -231564614 - AluSq/x SINE Alu -185 127 1 364 123 0 0 chr2 21692011 21692076 -231564507 - L1MB7 LINE L1 -8 6176 6112 2304 110 0 3 chr2 21692076 21692386 -231564197 + AluSx SINE Alu 1 309 -3 1795 180 13 124 chr2 21692431 21692719 -231563864 - LTR42 LTR ERVL -2 493 275 1467 97 65 5 chr2 21692719 21692936 -231563647 + MER30 DNA MER1_type 1 230 0 1795 180 13 124 chr2 21692936 21693113 -231563470 - LTR42 LTR ERVL -220 275 80 2533 209 39 37 chr2 21693154 21693350 -231563233 - L1MB7 LINE L1 -142 6042 5848 1633 173 7 17 chr2 21693350 21693651 -231562932 + AluJb SINE Alu 1 298 -14 2533 209 39 37 chr2 21693651 21693886 -231562697 - L1MB7 LINE L1 -336 5848 5615 2209 124 25 25 chr2 21693886 21694250 -231562333 - THE1B LTR MaLR 0 364 1 2533 209 39 37 chr2 21694250 21694488 -231562095 - L1MB7 LINE L1 -569 5615 5371 250 204 32 21 chr2 21694542 21694635 -231561948 + (TA)n Simple_repeat Simple_repeat 1 94 0 23 0 0 0 chr2 21694908 21694931 -231561652 + AT_rich Low_complexity Low_complexity 1 23 0 2279 147 12 20 chr2 21695052 21695460 -231561123 - MER65A LTR ERV1 -1 444 40 254 61 82 20 chr2 21695486 21695535 -231561048 - MER65A LTR ERV1 -391 54 3 223 376 47 0 chr2 21696028 21696113 -231560470 + L2 LINE L2 3141 3229 -43 186 275 143 11 chr2 21696151 21696242 -231560341 + L2 LINE L2 2566 2668 -646 245 358 57 24 chr2 21696268 21696391 -231560192 + L2 LINE L2 3141 3267 -5 308 279 72 90 chr2 21696533 21696755 -231559828 - MLT1I LTR MaLR -107 302 85 266 269 25 109 chr2 21696848 21696967 -231559616 - L2 LINE L2 -521 2793 2685 468 314 78 30 chr2 21697057 21697472 -231559111 + L1ME3A LINE L1 4805 5239 -907 2655 187 32 5 chr2 21697483 21698049 -231558534 + L1MB5 LINE L1 5583 6163 -11 1041 290 63 28 chr2 21698111 21698794 -231557789 + L1ME3A LINE L1 5237 5947 -219 545 115 39 10 chr2 21698794 21698898 -231557685 + L1MA7 LINE L1 6180 6286 -5 1497 210 144 87 chr2 21699292 21699516 -231557067 + MLT1E1 LTR MaLR 1 211 -443 2003 150 18 29 chr2 21699516 21699857 -231556726 + MER1B DNA MER1_type 1 337 0 1497 210 144 87 chr2 21699857 21700241 -231556342 + MLT1E1 LTR MaLR 211 644 -10 1516 175 25 39 chr2 21700336 21700621 -231555962 + AluJb SINE Alu 1 281 -31 317 256 73 0 chr2 21700623 21700705 -231555878 + L1MC4 LINE L1 6616 6703 -1339 198 0 0 0 chr2 21701167 21701189 -231555394 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 462 293 45 37 chr2 21701235 21701481 -231555102 - L1MEd LINE L1 -4892 1227 980 23 0 0 0 chr2 21701725 21701748 -231554835 + AT_rich Low_complexity Low_complexity 1 23 0 3761 121 27 0 chr2 21702132 21702718 -231553865 - LTR43 LTR ERV1 0 602 1 24 32 0 0 chr2 21702970 21703001 -231553582 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr2 21703094 21703129 -231553454 + AT_rich Low_complexity Low_complexity 1 35 0 15520 127 16 9 chr2 21703162 21703842 -231552741 - Tigger1 DNA MER2_type 0 2418 1744 2290 74 3 6 chr2 21703842 21704153 -231552430 - L1PA10 LINE L1 -6 6162 5853 15520 127 16 9 chr2 21704153 21705874 -231550709 - Tigger1 DNA MER2_type -674 1744 1 4150 134 9 76 chr2 21707352 21707547 -231549036 - L1MA9 LINE L1 -5 6307 6101 2640 55 0 0 chr2 21707547 21707858 -231548725 + AluY SINE Alu 1 311 0 4150 134 9 76 chr2 21707858 21708513 -231548070 - L1MA9 LINE L1 -211 6101 5514 1489 256 85 60 chr2 21708630 21708889 -231547694 - L1ME3A LINE L1 -78 6084 5833 7558 27 9 0 chr2 21708889 21710076 -231546507 - L1PA4 LINE L1 0 6155 4964 1489 256 85 60 chr2 21710076 21710616 -231545967 - L1ME3A LINE L1 -329 5833 5265 950 298 91 19 chr2 21710672 21711528 -231545055 - L1ME3A LINE L1 -955 5191 4274 328 273 87 40 chr2 21711541 21711646 -231544937 - L1ME3A LINE L1 -1922 4224 4108 1783 191 0 3 chr2 21711646 21711955 -231544628 + AluJb SINE Alu 1 308 -4 328 273 87 40 chr2 21711955 21711999 -231544584 - L1ME3A LINE L1 -2038 4108 4068 2096 162 0 20 chr2 21712039 21712384 -231544199 + MER7A DNA MER2_type 11 346 0 392 170 10 70 chr2 21712405 21712537 -231544046 - L1 LINE L1 -2165 3981 3856 6944 60 22 0 chr2 21712742 21713688 -231542895 - L1PA8 LINE L1 -4 6168 5219 315 214 14 0 chr2 21714942 21715012 -231541571 + L1ME1 LINE L1 4656 4726 -1420 1210 215 73 14 chr2 21715015 21715762 -231540821 + L1ME1 LINE L1 4791 5599 -567 1984 148 0 6 chr2 21715769 21716080 -231540503 + AluSx SINE Alu 1 309 -3 1395 195 0 28 chr2 21716087 21716369 -231540214 + AluJo SINE Alu 39 312 0 1478 239 33 32 chr2 21716373 21716842 -231539741 + L1ME1 LINE L1 5599 6021 -145 214 345 50 0 chr2 21717055 21717174 -231539409 + MIR SINE MIR 138 262 0 1980 153 10 61 chr2 21717277 21717688 -231538895 + MLT1B LTR MaLR 1 390 0 4368 56 0 5 chr2 21719014 21719565 -231537018 - L1PA7 LINE L1 0 6154 5607 1789 181 36 12 chr2 21721703 21722039 -231534544 + MSTB1 LTR MaLR 13 356 -76 22 0 0 0 chr2 21722108 21722130 -231534453 + AT_rich Low_complexity Low_complexity 1 22 0 1910 190 30 13 chr2 21722143 21722538 -231534045 + MER65A LTR ERV1 44 445 0 1703 230 18 53 chr2 21722561 21723336 -231533247 + MER65A-int LTR ERV1 29 942 -4050 2140 202 63 35 chr2 21723769 21724479 -231532104 + MER65A-int LTR ERV1 1096 1811 -3060 233 189 0 0 chr2 21724479 21724516 -231532067 - Alu SINE Alu -265 37 1 956 204 75 88 chr2 21724609 21725169 -231531414 + MER65A-int LTR ERV1 1720 3475 -3123 22 0 0 0 chr2 21725259 21725281 -231531302 + AT_rich Low_complexity Low_complexity 1 22 0 662 172 15 130 chr2 21725482 21725692 -231530891 + MER65A-int LTR ERV1 3499 3675 -2923 2209 96 10 7 chr2 21725692 21725858 -231530725 - AluSq SINE Alu -11 302 133 198 0 0 0 chr2 21725858 21725880 -231530703 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2209 96 10 7 chr2 21725880 21726014 -231530569 - AluSq SINE Alu -180 133 1 662 172 15 130 chr2 21726014 21726065 -231530518 + MER65A-int LTR ERV1 3675 3730 -2868 2079 209 78 84 chr2 21726141 21727469 -231529114 + MER65A-int LTR ERV1 3735 5094 -1237 2341 238 61 0 chr2 21727649 21728144 -231528439 + MER65A-int LTR ERV1 3604 4128 -743 1780 232 32 44 chr2 21728142 21728752 -231527831 + MER65A-int LTR ERV1 4231 4871 0 * 2267 147 34 27 chr2 21728752 21729194 -231527389 + MER65A LTR ERV1 1 445 0 316 317 6 82 chr2 21729623 21729806 -231526777 - L1 LINE L1 -1100 5046 4878 1289 274 73 52 chr2 21729870 21731261 -231525322 - L1 LINE L1 -1537 4609 3190 1684 189 3 16 chr2 21731316 21731623 -231524960 + AluJb SINE Alu 3 305 -7 1905 197 43 49 chr2 21731832 21732340 -231524243 - MLT1D LTR MaLR 0 505 1 314 315 114 22 chr2 21732631 21732874 -231523709 - L1MEd LINE L1 -868 1622 1334 281 226 65 21 chr2 21732942 21733035 -231523548 - L1MEd LINE L1 -4862 1257 1161 26 50 0 0 chr2 21733138 21733178 -231523405 + AT_rich Low_complexity Low_complexity 1 40 0 320 344 100 39 chr2 21733473 21733732 -231522851 - L1MEd LINE L1 -5571 548 274 2465 187 6 17 chr2 21733784 21734266 -231522317 + L1MB4 LINE L1 5656 6132 -48 28 0 0 0 chr2 21736943 21736971 -231519612 + AT_rich Low_complexity Low_complexity 1 28 0 41482 56 8 1 chr2 21736971 21743060 -231513523 - L1PA5 LINE L1 -8 6146 11 2165 100 7 7 chr2 21743742 21744042 -231512541 - AluSq SINE Alu -12 301 2 263 293 46 46 chr2 21744099 21744246 -231512337 - MIR SINE MIR -23 185 26 253 313 38 0 chr2 21744216 21744296 -231512287 - MIR SINE MIR -116 146 64 * 2844 227 35 29 chr2 21744705 21745552 -231511031 - L1ME1 LINE L1 -50 6376 5546 2906 239 93 15 chr2 21745631 21746567 -231510016 - L1ME1 LINE L1 -874 5532 4505 210 71 0 0 chr2 21746567 21746595 -231509988 + (TG)n Simple_repeat Simple_repeat 1 28 0 2906 239 93 15 chr2 21746595 21746704 -231509879 - L1ME1 LINE L1 -1901 4505 4406 237 213 25 25 chr2 21746704 21746826 -231509757 + CT-rich Low_complexity Low_complexity 3 124 0 272 167 44 56 chr2 21746862 21746952 -231509631 - L1M LINE L1 -752 5414 5329 681 221 22 31 chr2 21746966 21747131 -231509452 - L1ME1 LINE L1 -1976 4430 4266 198 0 0 0 chr2 21747131 21747153 -231509430 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 681 221 22 31 chr2 21747153 21747209 -231509374 - L1ME1 LINE L1 -2140 4266 4211 826 191 0 0 chr2 21747226 21747367 -231509216 - FRAM SINE Alu -36 140 1 3859 260 39 26 chr2 21747367 21749108 -231507475 - L1ME1 LINE L1 -2185 4221 2459 345 206 149 37 chr2 21749113 21749220 -231507363 - L1ME1 LINE L1 -5051 1358 1240 1234 295 66 43 chr2 21749247 21749410 -231507173 - L1M4c LINE L1 -4075 3063 2905 2218 81 0 14 chr2 21749410 21749714 -231506869 - AluY SINE Alu 0 300 1 1234 295 66 43 chr2 21749714 21750655 -231505928 - L1M4c LINE L1 -4233 2905 1987 1719 143 175 24 chr2 21750655 21751027 -231505556 + MSTA LTR MaLR 1 428 0 8430 153 25 42 chr2 21751029 21752635 -231503948 + MSTA-int LTR MaLR 3 1580 0 1535 176 213 0 chr2 21752635 21752808 -231503775 + MSTA LTR MaLR 1 136 -292 183 42 0 0 chr2 21752808 21752832 -231503751 + (TC)n Simple_repeat Simple_repeat 2 25 0 1535 176 213 0 chr2 21752832 21753011 -231503572 + MSTA LTR MaLR 136 428 0 1234 295 66 43 chr2 21753011 21753399 -231503184 - L1M4c LINE L1 -5150 1988 1390 1894 138 23 129 chr2 21753399 21753878 -231502705 - MSTA LTR MaLR 0 428 1 5743 192 30 14 chr2 21753878 21754921 -231501662 + L1 LINE L1 3359 4384 -1762 1951 162 13 0 chr2 21754921 21755224 -231501359 + AluSx SINE Alu 1 307 -5 5743 192 30 14 chr2 21755224 21755311 -231501272 + L1 LINE L1 4384 4468 -1678 195 42 0 0 chr2 21755311 21755335 -231501248 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 5743 192 30 14 chr2 21755335 21755453 -231501130 + L1 LINE L1 4468 4628 -1518 21 57 0 0 chr2 21755607 21755642 -231500941 + AT_rich Low_complexity Low_complexity 1 35 0 230 232 184 68 chr2 21756157 21756347 -231500236 - L1M4c LINE L1 -6256 599 388 1815 172 17 0 chr2 21757254 21757556 -231499027 - AluSx SINE Alu -1 311 5 431 331 57 0 chr2 21758372 21758496 -231498087 + L2 LINE L2 3142 3272 0 1473 205 13 13 chr2 21758788 21759091 -231497492 + AluJo SINE Alu 1 303 -9 236 274 167 0 chr2 21759251 21759335 -231497248 - L2 LINE L2 -2 3270 3173 348 64 0 0 chr2 21763686 21763733 -231492850 + (TG)n Simple_repeat Simple_repeat 2 48 0 216 182 0 0 chr2 21763733 21763777 -231492806 + (TA)n Simple_repeat Simple_repeat 2 45 0 329 311 36 51 chr2 21763883 21764082 -231492501 - MIR3 SINE MIR -50 158 18 907 304 51 27 chr2 21767045 21767381 -231489202 + L2 LINE L2 2952 3295 -18 342 0 0 0 chr2 21768132 21768170 -231488413 + (CA)n Simple_repeat Simple_repeat 2 39 0 703 183 84 0 chr2 21769498 21769640 -231486943 - MER105 DNA DNA -47 157 4 457 336 0 0 chr2 21769640 21769782 -231486801 + MLT1J1 LTR MaLR 11 152 -294 350 370 37 12 chr2 21769839 21769916 -231486667 + MLT1J2 LTR MaLR 244 318 -132 2256 130 19 30 chr2 21769916 21770284 -231486299 + THE1B LTR MaLR 1 364 0 350 370 37 12 chr2 21770284 21770368 -231486215 + MLT1J2 LTR MaLR 318 409 -41 462 288 21 78 chr2 21770833 21770964 -231485619 + MER5A DNA MER1_type 4 122 -67 2548 65 0 0 chr2 21770964 21771272 -231485311 - AluY SINE Alu -3 308 1 462 288 21 78 chr2 21771272 21771331 -231485252 + MER5A DNA MER1_type 122 183 -6 516 319 125 0 chr2 21772253 21772469 -231484114 + MIR SINE MIR 8 250 -12 470 189 100 0 chr2 21773969 21774059 -231482524 + MLT1E LTR MaLR 1 99 -494 848 198 12 12 chr2 21774064 21774231 -231482352 - FRAM SINE Alu -9 167 1 1218 216 25 85 chr2 21774327 21774692 -231481891 + MLT1E1 LTR MaLR 312 654 0 236 215 103 75 chr2 21774827 21774934 -231481649 - MIR SINE MIR -27 235 126 362 326 15 22 chr2 21774934 21775069 -231481514 - MIR SINE MIR -109 153 20 257 175 140 18 chr2 21775274 21775331 -231481252 - L2 LINE L2 -11 3302 3239 445 254 138 14 chr2 21776337 21776475 -231480108 - MER5A DNA MER1_type -3 186 32 2044 227 85 58 chr2 21776749 21777746 -231478837 - L1MC5 LINE L1 -44 7917 6894 191 61 30 0 chr2 21777765 21777798 -231478785 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 297 276 127 22 chr2 21777953 21778087 -231478496 - L2 LINE L2 -1023 2291 2144 233 317 48 29 chr2 21778339 21778443 -231478140 - MIR SINE MIR -155 107 2 3709 147 30 3 chr2 21778985 21779650 -231476933 + L1MA5A LINE L1 5615 6297 0 342 0 0 0 chr2 21779898 21779936 -231476647 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 480 306 27 7 chr2 21782270 21782417 -231474166 + MIR3 SINE MIR 54 203 -5 370 171 34 0 chr2 21782676 21782764 -231473819 + GA-rich Low_complexity Low_complexity 2 92 0 2038 75 32 0 chr2 21782812 21783090 -231473493 + L1PA8 LINE L1 5886 6172 0 186 191 0 0 chr2 21783327 21783369 -231473214 + CT-rich Low_complexity Low_complexity 3 44 0 290 219 27 41 chr2 21784174 21784247 -231472336 + MER112 DNA MER1_type 178 249 -11 240 286 76 76 chr2 21784454 21784664 -231471919 + MLT1K LTR MaLR 293 502 -86 6054 187 94 102 chr2 21784763 21786943 -231469640 - L1MCa LINE L1 -4241 2185 22 419 315 41 20 chr2 21787017 21787163 -231469420 - MIR SINE MIR -95 167 19 372 284 169 11 chr2 21788122 21788305 -231468278 + L2 LINE L2 3102 3313 0 539 92 0 0 chr2 21788683 21788759 -231467824 + AluSc SINE Alu 226 301 -8 1608 187 0 31 chr2 21792231 21792550 -231464033 - AluJo SINE Alu 0 310 1 2219 110 0 7 chr2 21792852 21793160 -231463423 + AluSc SINE Alu 1 306 -3 892 275 13 8 chr2 21794425 21794661 -231461922 + MIR SINE MIR 1 237 -25 263 281 219 10 chr2 21794931 21795123 -231461460 + LTR33A LTR ERVL 292 523 0 279 79 0 0 chr2 21798097 21798135 -231458448 + (TTC)n Simple_repeat Simple_repeat 1 38 0 6204 77 16 8 chr2 21798135 21799816 -231456767 - L1PA7 LINE L1 -26 6128 4441 * 6848 99 4 30 chr2 21799808 21800413 -231456170 + L1P LINE L1 1672 2292 -3854 1593 117 0 0 chr2 21800413 21800626 -231455957 + AluSc SINE Alu 71 283 -26 6848 99 4 30 chr2 21800626 21800639 -231455944 + L1P LINE L1 2292 2304 -3842 188 35 35 0 chr2 21800639 21800668 -231455915 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 6848 99 4 30 chr2 21800668 21801172 -231455411 + L1P LINE L1 2304 2765 -3381 268 327 128 29 chr2 21801177 21801458 -231455125 - L2 LINE L2 -962 2352 2044 191 333 51 0 chr2 21801466 21801583 -231455000 - L2 LINE L2 -1508 1806 1684 310 293 140 57 chr2 21801906 21802135 -231454448 - L2 LINE L2 -42 3230 2983 458 255 28 28 chr2 21802268 21802413 -231454170 - MER58B DNA MER1_type -1 340 196 1505 222 59 61 chr2 21802415 21803041 -231453542 + MER92B LTR ERV1 1 625 -11 979 183 59 0 chr2 21803062 21803248 -231453335 - MER58B DNA MER1_type -144 197 1 414 307 9 9 chr2 21803296 21803410 -231453173 - L2 LINE L2 -1 3312 3199 338 43 0 0 chr2 21803426 21803472 -231453111 + MADE1 DNA Mariner 35 80 0 316 360 25 5 chr2 21803637 21803837 -231452746 - MARNA DNA Mariner -100 486 283 1117 217 33 79 chr2 21803939 21804280 -231452303 + MLT1A2 LTR MaLR 1 323 -51 2246 89 0 7 chr2 21804280 21804573 -231452010 + AluY SINE Alu 1 291 -20 1117 217 33 79 chr2 21804573 21804623 -231451960 + MLT1A2 LTR MaLR 323 374 0 198 349 79 16 chr2 21805483 21805609 -231450974 - L2 LINE L2 -1 3271 3138 491 241 55 65 chr2 21806435 21806634 -231449949 - MIR3 SINE MIR -7 201 5 213 227 213 85 chr2 21806793 21806934 -231449649 + L2 LINE L2 3150 3308 -5 186 327 75 19 chr2 21807224 21807331 -231449252 - L2 LINE L2 0 3313 3201 401 277 76 113 chr2 21808500 21808854 -231447729 - L3 LINE CR1 -177 1400 1060 29 78 0 0 chr2 21811543 21811607 -231444976 + AT_rich Low_complexity Low_complexity 1 64 0 363 290 0 23 chr2 21811754 21811794 -231444789 + (TA)n Simple_repeat Simple_repeat 2 41 -88 279 0 0 0 chr2 21811794 21811825 -231444758 + (CA)n Simple_repeat Simple_repeat 2 32 0 2387 114 39 3 chr2 21811825 21812184 -231444399 + THE1C LTR MaLR 2 373 -2 363 290 0 23 chr2 21812184 21812273 -231444310 + (TA)n Simple_repeat Simple_repeat 39 129 0 7009 114 11 7 chr2 21812300 21812987 -231443596 - L1PA8 LINE L1 -3 6169 5486 2340 84 3 3 chr2 21812987 21813284 -231443299 - AluY SINE Alu -14 297 1 7009 114 11 7 chr2 21813284 21814494 -231442089 - L1PA8 LINE L1 -686 5486 4278 215 244 0 0 chr2 21814878 21814919 -231441664 + L2 LINE L2 3219 3259 -13 282 358 29 7 chr2 21816936 21817073 -231439510 + L3 LINE CR1 651 790 -787 581 320 24 10 chr2 21817084 21817290 -231439293 - MIR SINE MIR -11 251 43 215 360 174 21 chr2 21817393 21817635 -231438948 + L3 LINE CR1 900 1178 -399 375 290 30 38 chr2 21817775 21817906 -231438677 - L2 LINE L2 -1 3271 3142 2055 169 6 0 chr2 21817944 21818288 -231438295 - MER7A DNA MER2_type -1 345 2 469 320 63 80 chr2 21818353 21818718 -231437865 + L3 LINE CR1 1204 1562 -15 184 281 31 31 chr2 21819234 21819298 -231437285 + MIR3 SINE MIR 97 160 -48 288 349 54 8 chr2 21819338 21819467 -231437116 - MER5B DNA MER1_type -37 141 7 267 297 0 0 chr2 21819462 21819526 -231437057 + MIR3 SINE MIR 145 208 0 * 252 0 0 0 chr2 21819555 21819583 -231437000 + (CA)n Simple_repeat Simple_repeat 2 29 0 243 0 0 0 chr2 21819589 21819616 -231436967 + (TG)n Simple_repeat Simple_repeat 2 28 0 1833 177 19 8 chr2 21821292 21821696 -231434887 - MLT2B2 LTR ERVL -64 456 1 289 281 167 9 chr2 21821867 21821981 -231434602 - MIR SINE MIR -82 180 49 807 287 113 29 chr2 21823545 21824030 -231432553 - MLT1H1 LTR MaLR 0 555 30 221 274 14 0 chr2 21824970 21825043 -231431540 + (TA)n Simple_repeat Simple_repeat 2 75 0 236 263 132 13 chr2 21825504 21825580 -231431003 + MIR SINE MIR 96 180 -82 734 190 65 13 chr2 21826571 21826816 -231429767 + MER33 DNA MER1_type 1 255 -69 19274 159 20 14 chr2 21826816 21834449 -231422134 - L1MA1 LINE L1 -11 7710 16 524 117 21 0 chr2 21834455 21834549 -231422034 + MER33 DNA MER1_type 256 351 -12 498 348 52 4 chr2 21835652 21835885 -231420698 + MIR SINE MIR 18 261 -1 801 271 105 56 chr2 21835935 21836345 -231420238 - LTR16A LTR ERVL 0 450 21 961 273 164 25 chr2 21837141 21837702 -231418881 - HAL1 LINE L1 -21 2486 1849 283 29 0 0 chr2 21837704 21837739 -231418844 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 865 181 0 0 chr2 21837739 21837883 -231418700 - AluSc SINE Alu -31 278 135 739 240 20 15 chr2 21837958 21838154 -231418429 - HAL1 LINE L1 -739 1768 1572 382 311 89 26 chr2 21838155 21838425 -231418158 - HAL1 LINE L1 -2208 299 13 433 289 107 75 chr2 21838429 21839189 -231417394 - HAL1 LINE L1 -947 1560 777 264 306 0 0 chr2 21839257 21839319 -231417264 - HAL1 LINE L1 -1859 648 587 821 304 68 42 chr2 21839360 21839814 -231416769 - HAL1 LINE L1 -2029 478 13 346 335 83 53 chr2 21840755 21840971 -231415612 - L3 LINE CR1 -128 1449 1241 2902 87 16 3 chr2 21840971 21841337 -231415246 - THE1C LTR MaLR -3 372 2 346 335 83 53 chr2 21841337 21841588 -231414995 - L3 LINE CR1 -336 1241 968 4670 36 0 0 chr2 21841730 21842257 -231414326 - L1PA4 LINE L1 0 6155 5629 1254 56 6 0 chr2 21842257 21842419 -231414164 + L1P LINE L1 3830 3992 -2154 211 282 97 57 chr2 21843130 21843254 -231413329 - MIR SINE MIR -68 194 66 2239 105 23 0 chr2 21843277 21843615 -231412968 - AluSq SINE Alu 0 345 1 290 282 22 74 chr2 21845050 21845198 -231411385 - MIR3 SINE MIR -90 118 10 24 0 0 0 chr2 21845304 21845328 -231411255 + AT_rich Low_complexity Low_complexity 1 24 0 831 252 58 13 chr2 21846161 21846387 -231410196 - MIR SINE MIR -26 236 1 664 284 39 10 chr2 21847835 21848043 -231408540 - MIR SINE MIR -12 250 37 339 164 82 8 chr2 21848414 21848536 -231408047 + (TA)n Simple_repeat Simple_repeat 1 131 0 209 304 0 0 chr2 21848776 21848822 -231407761 + L2 LINE L2 3137 3182 -90 21 0 0 0 chr2 21849933 21849954 -231406629 + AT_rich Low_complexity Low_complexity 1 21 0 507 270 82 36 chr2 21850154 21850350 -231406233 - MIR3 SINE MIR -1 207 3 1148 229 13 4 chr2 21850625 21850852 -231405731 + MLT1A1 LTR MaLR 1 229 -136 187 355 36 18 chr2 21851126 21851236 -231405347 - L2 LINE L2 -222 3050 2939 1459 341 127 26 chr2 21851972 21853166 -231403417 + L2 LINE L2 1541 2855 -459 477 217 0 126 chr2 21853166 21853309 -231403274 + MER63 DNA MER1_type 3 753 -309 706 355 38 16 chr2 21853392 21853817 -231402766 + L2 LINE L2 2857 3290 -23 1146 276 86 46 chr2 21854353 21854831 -231401752 + LTR33 LTR ERVL 6 502 -19 211 238 88 62 chr2 21855069 21855149 -231401434 + L2 LINE L2 2532 2613 -701 2419 143 76 0 chr2 21855231 21855624 -231400959 - MSTA LTR MaLR 0 428 6 477 376 64 51 chr2 21855716 21856236 -231400347 + L2 LINE L2 2743 3267 -5 229 200 0 17 chr2 21856444 21856504 -231400079 - L1ME4a LINE L1 -103 6018 5960 2656 43 0 0 chr2 21856912 21857217 -231399366 + AluY SINE Alu 1 305 -6 245 143 0 20 chr2 21857300 21857349 -231399234 + (TG)n Simple_repeat Simple_repeat 1 48 0 216 0 0 0 chr2 21858420 21858444 -231398139 + (A)n Simple_repeat Simple_repeat 1 24 0 447 327 99 9 chr2 21858969 21859180 -231397403 + MIR SINE MIR 15 244 -18 944 222 72 19 chr2 21859907 21860114 -231396469 - MER20 DNA MER1_type 0 219 2 2131 119 3 3 chr2 21860585 21860879 -231395704 - AluSq SINE Alu -19 294 1 329 356 56 19 chr2 21863205 21863365 -231393218 + L2 LINE L2 3104 3269 -3 349 294 83 44 chr2 21865374 21865554 -231391029 + MIR3 SINE MIR 19 205 -3 233 307 34 23 chr2 21865829 21865917 -231390666 - L2 LINE L2 -45 3268 3180 191 383 0 25 chr2 21866184 21866265 -231390318 + MIR SINE MIR 19 97 -111 225 233 17 17 chr2 21867877 21867937 -231388646 + MIR3 SINE MIR 112 171 -37 209 291 37 52 chr2 21868034 21868168 -231388415 - L3b LINE CR1 -140 1443 1312 183 42 0 0 chr2 21869090 21869114 -231387469 + (A)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr2 21869549 21869577 -231387006 + AT_rich Low_complexity Low_complexity 1 28 0 368 261 22 22 chr2 21871173 21871265 -231385318 - MIR SINE MIR -100 108 17 183 313 102 39 chr2 21871389 21871517 -231385066 + MIR3 SINE MIR 11 146 -62 1337 150 0 33 chr2 21871935 21872148 -231384435 - AluJo SINE Alu -22 290 85 488 267 59 30 chr2 21872148 21872283 -231384300 - AluJ SINE Alu -62 250 112 695 215 0 0 chr2 21872283 21872404 -231384179 - AluJ SINE Alu -178 124 4 198 333 58 58 chr2 21873188 21873308 -231383275 + L2 LINE L2 3111 3230 -42 246 310 42 0 chr2 21873691 21873762 -231382821 + MIR SINE MIR 58 131 -131 225 0 0 0 chr2 21877368 21877393 -231379190 + (TC)n Simple_repeat Simple_repeat 2 26 0 1783 166 10 23 chr2 21877414 21877722 -231378861 + AluJb SINE Alu 3 306 -6 27 49 0 0 chr2 21877967 21878008 -231378575 + AT_rich Low_complexity Low_complexity 1 41 0 651 276 79 47 chr2 21878237 21878342 -231378241 - HAL1 LINE L1 -8 2499 2399 1852 201 174 42 chr2 21878342 21878895 -231377688 - MLT1E2 LTR MaLR 0 626 1 651 276 79 47 chr2 21878895 21879217 -231377366 - HAL1 LINE L1 -108 2399 2058 773 269 111 38 chr2 21879282 21879624 -231376959 - HAL1 LINE L1 -587 1920 1554 1230 210 105 68 chr2 21879625 21880079 -231376504 - HAL1 LINE L1 -1938 569 94 2472 170 34 12 chr2 21880079 21880496 -231376087 - MSTB LTR MaLR 0 426 1 1230 210 105 68 chr2 21880496 21880526 -231376057 - HAL1 LINE L1 -2413 94 67 1759 149 4 25 chr2 21881417 21881698 -231374885 + AluSx SINE Alu 1 275 -37 219 36 0 0 chr2 21881707 21881735 -231374848 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 540 352 40 0 chr2 21882167 21882366 -231374217 + MIR SINE MIR 48 254 -8 260 284 74 0 chr2 21883373 21883454 -231373129 + L2 LINE L2 2959 3045 -227 216 86 0 0 chr2 21884019 21884054 -231372529 + (A)n Simple_repeat Simple_repeat 1 35 0 23 33 0 0 chr2 21884696 21884726 -231371857 + AT_rich Low_complexity Low_complexity 1 30 0 186 375 106 47 chr2 21885117 21885437 -231371146 + L2 LINE L2 2890 3228 -44 635 273 53 49 chr2 21885591 21885855 -231370728 + MARNA DNA Mariner 159 423 -163 224 384 20 20 chr2 21885960 21886059 -231370524 + MIR SINE MIR 2 100 -162 375 277 7 57 chr2 21886243 21886365 -231370218 - MIR SINE MIR -118 144 28 2490 69 0 7 chr2 21886365 21886669 -231369914 - AluY SINE Alu -9 302 1 375 277 7 57 chr2 21886669 21886687 -231369896 - MIR SINE MIR -234 28 11 844 318 28 13 chr2 21887014 21887332 -231369251 + L3 LINE CR1 1254 1576 -1 251 253 72 12 chr2 21887686 21887769 -231368814 - MIR SINE MIR -66 196 109 515 215 76 38 chr2 21888356 21888514 -231368069 + L1ME3A LINE L1 5778 5941 -229 713 283 123 13 chr2 21889545 21889845 -231366738 + L2 LINE L2 2967 3299 -14 2007 301 44 11 chr2 21890905 21891547 -231365036 - MLT2F LTR ERVL 0 663 1 296 236 87 87 chr2 21891547 21891708 -231364875 - Ricksha DNA DNA -2900 346 186 1538 250 165 50 chr2 21891906 21892530 -231364053 + MER21B LTR ERV1 19 714 -149 356 0 23 0 chr2 21892548 21892592 -231363991 + (CA)n Simple_repeat Simple_repeat 2 46 0 1958 281 65 20 chr2 21892677 21893386 -231363197 - ERVL-F LTR ERVL -331 5433 4693 10325 195 73 21 chr2 21893418 21896572 -231360011 + L1MB3 LINE L1 20 3345 -3037 1913 64 0 26 chr2 21896593 21896859 -231359724 + L1PA13 LINE L1 5898 6156 -7 898 73 156 84 chr2 21896992 21897014 -231359569 + L1PA16 LINE L1 5975 5994 -172 186 43 0 0 chr2 21897014 21897037 -231359546 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 898 73 156 84 chr2 21897037 21897193 -231359390 + L1PA16 LINE L1 5994 6166 0 * 1774 229 71 4 chr2 21897190 21897727 -231358856 + L1MB3 LINE L1 3427 3999 -2383 5941 211 34 16 chr2 21947727 21950110 -231306473 + L1MB3 LINE L1 3994 6417 -2 795 271 84 16 chr2 21950124 21950375 -231306208 - ERVL-F LTR ERVL -1121 4643 4376 * 3038 243 34 3 chr2 21950366 21951040 -231305543 - ERVL-F LTR ERVL -2231 3533 2839 412 281 146 12 chr2 21951055 21951219 -231305364 - MIR SINE MIR -3 259 74 5029 291 45 11 chr2 21951335 21953136 -231303447 - ERVL-F LTR ERVL -2996 2768 853 1770 162 11 43 chr2 21953249 21953620 -231302963 - L1MB8 LINE L1 -200 5978 5620 275 285 114 32 chr2 21953636 21953794 -231302789 - MIR3 SINE MIR -37 171 1 537 321 146 36 chr2 21956208 21956775 -231299808 - L2 LINE L2 -191 3081 2455 2249 106 26 32 chr2 21956776 21957153 -231299430 + THE1C LTR MaLR 1 375 0 24 53 0 0 chr2 21957164 21957202 -231299381 + AT_rich Low_complexity Low_complexity 1 38 0 1935 116 7 27 chr2 21957699 21958017 -231298566 + AluSx SINE Alu 1 312 0 336 329 91 30 chr2 21959069 21959300 -231297283 - L3 LINE CR1 -673 904 660 232 179 80 86 chr2 21959305 21959456 -231297127 + MER113 DNA MER1_type? 4 153 -368 237 132 0 0 chr2 21961024 21961062 -231295521 + (TAG)n Simple_repeat Simple_repeat 1 38 0 305 250 79 0 chr2 21961257 21961333 -231295250 - MIR SINE MIR -70 192 111 234 315 130 12 chr2 21963267 21963428 -231293155 + MIR SINE MIR 60 238 -24 993 114 13 0 chr2 21964545 21964694 -231291889 - L1PA11 LINE L1 -11 6163 6013 1051 313 67 38 chr2 21964733 21965152 -231291431 + LTR16A LTR ERVL 23 446 -4 223 214 0 18 chr2 21965693 21965749 -231290834 + (TA)n Simple_repeat Simple_repeat 1 55 0 382 267 75 107 chr2 21965785 21966160 -231290423 + L1ME4a LINE L1 5602 5964 -157 245 279 0 0 chr2 21966162 21966230 -231290353 + (TA)n Simple_repeat Simple_repeat 1 68 0 338 231 51 0 chr2 21966236 21966314 -231290269 - L1MC4 LINE L1 -1347 6695 6614 333 311 0 0 chr2 21966250 21966340 -231290243 + L1MC4 LINE L1 6614 6703 -1339 * 311 301 0 0 chr2 21966354 21966437 -231290146 - L1MC4 LINE L1 -1346 6696 6614 183 80 0 0 chr2 21966437 21966462 -231290121 + (TA)n Simple_repeat Simple_repeat 1 25 0 283 216 104 40 chr2 21966462 21966587 -231289996 + L1ME4a LINE L1 5935 6067 -54 378 340 102 48 chr2 21966591 21967259 -231289324 + L2 LINE L2 961 1664 -1650 469 284 13 23 chr2 21967650 21967927 -231288656 - L1MC4 LINE L1 -339 5831 5644 1454 226 25 67 chr2 21968437 21968871 -231287712 + LTR52 LTR ERVL 6 421 0 23 0 0 0 chr2 21969062 21969085 -231287498 + AT_rich Low_complexity Low_complexity 1 23 0 1499 190 36 30 chr2 21969349 21969712 -231286871 + MLT1A1 LTR MaLR 1 365 0 1148 58 0 0 chr2 21970013 21970152 -231286431 - MER85 DNA T2_type 0 139 1 426 307 93 42 chr2 21970881 21971096 -231285487 + MIR SINE MIR 3 228 -34 1287 138 55 0 chr2 21972596 21972814 -231283769 + MER30 DNA MER1_type 1 230 0 1724 162 76 15 chr2 21972902 21973296 -231283287 + L1MB7 LINE L1 5743 6160 -24 525 292 0 0 chr2 21974316 21974453 -231282130 - MIR SINE MIR -45 217 81 253 344 131 55 chr2 21975254 21975675 -231280908 - L2 LINE L2 -431 2883 2431 199 326 114 38 chr2 21976382 21976451 -231280132 + L2 LINE L2 2392 2454 -860 2115 125 90 0 chr2 21976451 21976795 -231279788 - THE1C LTR MaLR 0 375 1 199 326 114 38 chr2 21976795 21976961 -231279622 + L2 LINE L2 2454 2645 -669 229 302 47 35 chr2 21977005 21977091 -231279492 - L2 LINE L2 -37 3276 3190 205 310 81 0 chr2 21977498 21977585 -231278998 - L2 LINE L2 -748 2566 2473 1563 178 20 10 chr2 21978061 21978359 -231278224 + MER2 DNA MER2_type 32 332 -13 27 0 0 0 chr2 21978729 21978756 -231277827 + AT_rich Low_complexity Low_complexity 1 27 0 263 347 76 31 chr2 21978773 21979064 -231277519 - L1MC/D LINE L1 -2001 5790 5487 464 336 67 34 chr2 21979419 21979913 -231276670 - L1MC/D LINE L1 -3387 2742 2233 251 296 6 62 chr2 21980011 21980173 -231276410 - L1MC/D LINE L1 -5005 1114 962 815 161 0 7 chr2 21980547 21980684 -231275899 - FRAM SINE Alu -10 166 31 204 277 0 21 chr2 21981587 21981634 -231274949 - MIR3 SINE MIR -20 188 143 885 317 35 0 chr2 21982673 21982957 -231273626 - LTR33 LTR ERVL -222 299 6 239 269 50 50 chr2 21983193 21983312 -231273271 - MIR SINE MIR -131 131 13 205 65 32 0 chr2 21983755 21983786 -231272797 + L2 LINE L2 1380 1411 -1903 192 250 0 21 chr2 21983888 21983936 -231272647 - L2 LINE L2 -8 3264 3218 225 305 29 29 chr2 21984838 21984943 -231271640 + MIR SINE MIR 75 179 -83 190 306 82 41 chr2 21985519 21985617 -231270966 + MIR SINE MIR 7 108 -154 696 306 119 25 chr2 21986681 21987041 -231269542 - LTR16C LTR ERVL 0 491 98 404 309 101 39 chr2 21987510 21987717 -231268866 + MIR SINE MIR 29 248 -14 234 0 0 0 chr2 21987729 21987755 -231268828 + (CAT)n Simple_repeat Simple_repeat 3 28 0 1173 166 76 0 chr2 21987988 21988199 -231268384 - MER30 DNA MER1_type 0 230 4 206 289 52 31 chr2 21988728 21988825 -231267758 + MIR SINE MIR 1 99 -163 458 296 32 0 chr2 21988847 21988972 -231267611 + L2 LINE L2 3182 3310 -3 186 208 0 21 chr2 21988970 21989018 -231267565 + MIR SINE MIR 93 139 -69 * 325 318 32 0 chr2 21989631 21989757 -231266826 + MIR SINE MIR 120 249 -13 246 324 193 14 chr2 21990596 21990741 -231265842 - L2 LINE L2 -87 3185 3015 221 171 0 0 chr2 21991467 21991508 -231265075 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 188 194 0 0 chr2 21991763 21991794 -231264789 + L2 LINE L2 3265 3295 -18 415 269 81 27 chr2 21995824 21995973 -231260610 - L3 LINE CR1 -14 1563 1407 988 247 93 0 chr2 21998620 21998657 -231257926 - MER33 DNA MER1_type -2265 320 288 1165 126 10 20 chr2 21998657 21998855 -231257728 + L1PA14 LINE L1 5964 6159 -2 988 247 93 0 chr2 21998855 21999119 -231257464 - MER33 DNA MER1_type -2297 288 1 1959 143 18 47 chr2 21999135 21999521 -231257062 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr2 22000468 22000503 -231256080 + AT_rich Low_complexity Low_complexity 1 35 0 437 177 0 0 chr2 22000646 22000725 -231255858 - L1P LINE L1 -905 5241 5163 3059 82 58 16 chr2 22000725 22001176 -231255407 + L1PA10 LINE L1 5683 6152 -16 273 257 46 46 chr2 22001983 22002092 -231254491 + MER103 DNA DNA 1 109 -57 409 256 0 0 chr2 22002816 22002906 -231253677 + L3 LINE CR1 480 569 -1008 387 0 0 0 chr2 22003180 22003223 -231253360 + (TG)n Simple_repeat Simple_repeat 1 43 0 1285 246 62 10 chr2 22003576 22003962 -231252621 + L1ME LINE L1 5397 5802 -319 942 227 63 54 chr2 22004024 22004465 -231252118 + L1MC5 LINE L1 7502 7946 -15 208 237 85 76 chr2 22005284 22005402 -231251181 + MIR SINE MIR 105 223 -39 197 207 0 17 chr2 22005433 22005491 -231251092 + CT-rich Low_complexity Low_complexity 1 57 0 22 35 0 0 chr2 22005690 22005719 -231250864 + AT_rich Low_complexity Low_complexity 1 29 0 210 37 0 0 chr2 22007871 22007898 -231248685 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1917 130 14 4 chr2 22007912 22008189 -231248394 - AluSx SINE Alu -30 282 3 4535 190 30 1 chr2 22008408 22009504 -231247079 - L1P4 LINE L1 -684 5482 4356 923 206 0 0 chr2 22009503 22009678 -231246905 - L1P4 LINE L1 -2341 3805 3631 * 329 310 173 28 chr2 22010235 22010519 -231246064 - MLT1H LTR MaLR -16 533 209 305 232 61 12 chr2 22010566 22010648 -231245935 + L1 LINE L1 3072 3157 -2989 1863 155 13 7 chr2 22010715 22011019 -231245564 - AluJb SINE Alu -6 306 1 1323 188 25 43 chr2 22011938 22012173 -231244410 + AluJo SINE Alu 29 260 -52 3515 117 31 13 chr2 22012173 22012728 -231243855 - MER61E LTR ERV1 -4 565 1 1323 188 25 43 chr2 22012728 22012774 -231243809 + AluJo SINE Alu 260 305 -7 317 239 35 26 chr2 22013291 22013404 -231243179 - MLT1H-int LTR MaLR -1269 102 2 421 240 100 60 chr2 22013407 22013738 -231242845 - MLT1H LTR MaLR -2 550 108 489 203 93 0 chr2 22014140 22014258 -231242325 - MER94 DNA DNA 0 134 6 255 271 0 14 chr2 22014268 22014338 -231242245 + HAL1b LINE L1 392 460 -888 3084 124 50 2 chr2 22014422 22014904 -231241679 - MER84 LTR ERV1 0 507 3 4021 120 14 14 chr2 22015356 22015990 -231240593 + MER41B LTR ERV1 2 635 0 277 280 141 49 chr2 22016291 22017063 -231239520 + L1 LINE L1 2205 3047 -3099 23 0 0 0 chr2 22018516 22018539 -231238044 + AT_rich Low_complexity Low_complexity 1 23 0 25 83 0 0 chr2 22018565 22018625 -231237958 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr2 22018956 22018978 -231237605 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 22020789 22020810 -231235773 + AT_rich Low_complexity Low_complexity 1 21 0 1772 162 6 19 chr2 22021221 22021536 -231235047 + AluJb SINE Alu 1 311 -1 1659 156 27 21 chr2 22022168 22022543 -231234040 + MER1B DNA MER1_type 1 337 -2 646 152 0 0 chr2 22022753 22022858 -231233725 - L1MA10 LINE L1 -25 6309 6205 1536 152 116 27 chr2 22022981 22023316 -231233267 - MLT1A1 LTR MaLR 0 365 1 396 279 54 0 chr2 22023316 22023463 -231233120 - L1M4 LINE L1 -2489 3657 3503 21 36 0 0 chr2 22025026 22025054 -231231529 + AT_rich Low_complexity Low_complexity 1 28 0 340 303 11 110 chr2 22026268 22026532 -231230051 - L1M4 LINE L1 -2296 3850 3613 200 322 0 0 chr2 22026977 22027064 -231229519 + T-rich Low_complexity Low_complexity 1 87 0 21 0 0 0 chr2 22027358 22027379 -231229204 + AT_rich Low_complexity Low_complexity 1 21 0 14088 156 24 7 chr2 22027393 22028173 -231228410 - Tigger1 DNA MER2_type 0 2418 1653 2840 189 136 42 chr2 22028173 22028928 -231227655 - LTR1B LTR ERV1 0 826 1 14088 156 24 7 chr2 22028928 22030525 -231226058 - Tigger1 DNA MER2_type -765 1653 1 531 348 81 45 chr2 22030624 22030815 -231225768 - HAL1 LINE L1 -904 1603 1420 2179 123 0 0 chr2 22030815 22031108 -231225475 + AluSx SINE Alu 3 295 -17 531 348 81 45 chr2 22031108 22031407 -231225176 - HAL1 LINE L1 -1087 1420 1086 3105 184 40 17 chr2 22031407 22032101 -231224482 - MER67C LTR ERV1 0 710 1 531 348 81 45 chr2 22032101 22032193 -231224390 - HAL1 LINE L1 -1421 1086 999 267 306 44 39 chr2 22032760 22032940 -231223643 + MLT1L LTR MaLR 98 278 -337 305 340 66 23 chr2 22034401 22034657 -231221926 - MLT1J1 LTR MaLR -4 442 176 367 179 83 12 chr2 22034781 22034865 -231221718 - MLT1J2 LTR MaLR -360 90 1 250 322 41 85 chr2 22035514 22035784 -231220799 + MIR SINE MIR 5 262 0 202 306 97 28 chr2 22036084 22036156 -231220427 - L2 LINE L2 -38 3234 3158 664 323 132 40 chr2 22038748 22039345 -231217238 - L3 LINE CR1 -396 1181 530 1128 161 256 25 chr2 22041019 22041293 -231215290 - MER1B DNA MER1_type 0 337 1 419 290 29 104 chr2 22042065 22042451 -231214132 - L1M4 LINE L1 -3002 3144 2788 910 262 78 38 chr2 22043104 22043501 -231213082 - L1ME3 LINE L1 -80 6082 5670 1408 211 32 7 chr2 22044827 22044983 -231211600 - AluJo SINE Alu -20 292 124 225 0 0 0 chr2 22044983 22045008 -231211575 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1408 211 32 7 chr2 22045008 22045136 -231211447 - AluJo SINE Alu -188 124 1 296 251 113 111 chr2 22045367 22045765 -231210818 + MLT1J LTR MaLR 113 511 0 1710 256 28 32 chr2 22046954 22047539 -231209044 + MLT2F LTR ERVL 45 661 -2 412 149 81 0 chr2 22047703 22047777 -231208806 + MIR SINE MIR 183 262 0 628 281 101 46 chr2 22047788 22048116 -231208467 + L3 LINE CR1 946 1291 -286 371 306 38 50 chr2 22050551 22050711 -231205872 + MIR SINE MIR 26 183 -79 1135 280 114 49 chr2 22050857 22051514 -231205069 + HAL1 LINE L1 344 1043 -1464 252 237 53 44 chr2 22051857 22051971 -231204612 + L1MC4 LINE L1 6587 6701 -1341 344 296 69 39 chr2 22052208 22052411 -231204172 + L1ME LINE L1 5426 5634 -528 185 224 10 31 chr2 22053870 22053894 -231202689 + (TA)n Simple_repeat Simple_repeat 1 24 -72 13467 136 39 16 chr2 22053894 22056250 -231200333 - Tigger1 DNA MER2_type -4 2414 5 185 224 10 31 chr2 22056250 22056323 -231200260 + (TA)n Simple_repeat Simple_repeat 24 96 0 3813 70 12 2 chr2 22056408 22056897 -231199686 + LTR3b LTR ERVK 3 496 -4 283 160 29 14 chr2 22057658 22057802 -231198781 + CT-rich Low_complexity Low_complexity 1 146 0 299 237 97 0 chr2 22057866 22057959 -231198624 - MER91C DNA MER1_type -1 139 38 211 356 14 0 chr2 22058155 22058228 -231198355 - MIR3 SINE MIR -13 195 122 483 321 46 28 chr2 22061312 22061530 -231195053 - MIR SINE MIR -35 227 6 204 370 17 34 chr2 22061585 22061704 -231194879 + L2 LINE L2 2967 3083 -189 218 218 18 18 chr2 22063208 22063263 -231193320 + GA-rich Low_complexity Low_complexity 2 56 0 300 355 30 18 chr2 22063328 22063494 -231193089 + MIR SINE MIR 19 186 -76 22 56 0 0 chr2 22063809 22063845 -231192738 + AT_rich Low_complexity Low_complexity 1 36 0 517 268 102 17 chr2 22064380 22064615 -231191968 - MLT1L LTR MaLR -349 266 12 1338 216 10 80 chr2 22065132 22065531 -231191052 + MLT1A2 LTR MaLR 4 374 0 550 161 9 45 chr2 22066453 22066565 -231190018 - L1MC1 LINE L1 -119 6214 6107 1369 198 80 0 chr2 22066569 22066721 -231189862 - AluJo SINE Alu -28 284 146 180 0 0 0 chr2 22066721 22066741 -231189842 + (TG)n Simple_repeat Simple_repeat 1 20 0 1369 198 80 0 chr2 22066741 22066851 -231189732 - AluJo SINE Alu -166 146 1 536 153 9 72 chr2 22067086 22067197 -231189386 + MER63 DNA MER1_type 679 782 -280 244 309 213 7 chr2 22069088 22069224 -231187359 + L2 LINE L2 3094 3257 -15 401 311 34 53 chr2 22069759 22069968 -231186615 + MIR3 SINE MIR 3 207 -1 198 239 65 0 chr2 22072054 22072100 -231184483 + L2 LINE L2 3257 3305 -8 464 331 49 37 chr2 22072124 22072369 -231184214 + MIR SINE MIR 13 260 -2 26 0 0 0 chr2 22073354 22073380 -231183203 + AT_rich Low_complexity Low_complexity 1 26 0 937 216 103 92 chr2 22074207 22074352 -231182231 + L1M4 LINE L1 3842 3984 -2162 342 171 29 0 chr2 22074352 22074422 -231182161 + L1PA16 LINE L1 6086 6157 -9 937 216 103 92 chr2 22074422 22074909 -231181674 + L1M4 LINE L1 3984 4481 -1665 766 308 19 5 chr2 22075089 22075334 -231181249 - MIR SINE MIR -10 252 6 1077 170 75 85 chr2 22076722 22077036 -231179547 + MSTA LTR MaLR 1 388 -38 1926 164 0 3 chr2 22077036 22077347 -231179236 - AluJb SINE Alu -2 310 1 1077 170 75 85 chr2 22077347 22077386 -231179197 + MSTA LTR MaLR 388 426 0 1620 206 19 25 chr2 22077447 22077806 -231178777 + MLT1A1 LTR MaLR 5 361 -4 448 330 33 14 chr2 22077915 22078127 -231178456 - MIR SINE MIR 0 262 47 720 228 48 6 chr2 22078560 22078727 -231177856 + MLT1A1 LTR MaLR 7 180 -185 720 178 0 0 chr2 22078740 22078858 -231177725 + MLT1A1 LTR MaLR 246 363 -2 204 67 0 0 chr2 22079265 22079295 -231177288 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 251 283 0 0 chr2 22079331 22079384 -231177199 + MIR SINE MIR 51 103 -159 188 247 144 52 chr2 22079759 22079856 -231176727 + L2 LINE L2 3208 3313 0 298 245 10 71 chr2 22079934 22080032 -231176551 - MIR SINE MIR -75 133 42 490 169 20 30 chr2 22081826 22081927 -231174656 + MLT1A1 LTR MaLR 1 85 -280 1212 139 135 87 chr2 22082011 22082299 -231174284 - AluJb SINE Alu 0 302 1 33 56 0 0 chr2 22082490 22082544 -231174039 + AT_rich Low_complexity Low_complexity 1 54 0 1353 186 52 0 chr2 22083024 22083329 -231173254 - MER33 DNA MER1_type -13 311 1 461 262 139 58 chr2 22083330 22083440 -231173143 + MER5A DNA MER1_type 4 135 -54 1908 124 0 32 chr2 22083440 22083743 -231172840 - AluSc SINE Alu 0 298 5 461 262 139 58 chr2 22083743 22083803 -231172780 + MER5A DNA MER1_type 135 189 0 2236 111 3 0 chr2 22085189 22085487 -231171096 + AluSg SINE Alu 1 299 -11 1330 209 47 75 chr2 22086293 22086680 -231169903 - MLT1B LTR MaLR 0 390 15 397 144 58 29 chr2 22089083 22089187 -231167396 - MER53 DNA DNA -70 119 13 566 259 103 19 chr2 22089674 22090099 -231166484 - L1M4 LINE L1 -3572 2574 2114 591 318 79 65 chr2 22090735 22091304 -231165279 - HAL1 LINE L1 -1111 1396 820 1761 281 27 38 chr2 22091430 22091979 -231164604 + MLT1E LTR MaLR 51 593 0 2845 145 23 0 chr2 22093426 22093909 -231162674 - L1PB1 LINE L1 -1 6866 6373 300 45 0 0 chr2 22093919 22093963 -231162620 - L1PA6 LINE L1 -2 6152 6109 9075 186 44 29 chr2 22093964 22098488 -231158095 - L1PB1 LINE L1 -1209 5653 903 676 289 24 0 chr2 22098573 22098781 -231157802 + MIR SINE MIR 46 258 -4 33 0 0 0 chr2 22099027 22099060 -231157523 + AT_rich Low_complexity Low_complexity 1 33 0 1577 105 35 113 chr2 22100921 22101293 -231155290 + L1MA2 LINE L1 5962 6304 0 354 316 40 0 chr2 22104834 22104986 -231151597 + L1MEc LINE L1 20 177 -6219 * 688 276 97 20 chr2 22104983 22105571 -231151012 + L1MEc LINE L1 1005 1637 -4759 3666 63 0 11 chr2 22105720 22106197 -231150386 - L1PA7 LINE L1 -4 6150 5679 1659 153 66 38 chr2 22106489 22106854 -231149729 + THE1C LTR MaLR 1 375 0 9646 138 11 39 chr2 22106856 22108480 -231148103 + THE1C-int LTR MaLR 3 1580 0 1928 120 67 25 chr2 22108481 22108840 -231147743 + THE1C LTR MaLR 2 375 0 357 283 90 21 chr2 22110200 22110345 -231146238 + MIR SINE MIR 90 244 -18 199 242 91 15 chr2 22111384 22111450 -231145133 + L2 LINE L2 3232 3302 -11 2116 120 3 25 chr2 22112079 22112395 -231144188 - AluSx SINE Alu -3 309 1 210 286 175 3 chr2 22112554 22112648 -231143935 - L2 LINE L2 -16 3297 3141 5938 103 13 6 chr2 22113173 22114224 -231142359 + L1PA14 LINE L1 5098 6157 -4 2149 86 0 4 chr2 22114269 22114536 -231142047 + AluSq SINE Alu 23 288 -25 561 300 31 24 chr2 22114624 22114911 -231141672 - L1ME LINE L1 -357 5813 5525 437 346 88 9 chr2 22114911 22115175 -231141408 - L1MEc LINE L1 -4562 1978 1709 360 318 27 20 chr2 22115328 22115476 -231141107 - L1MEc LINE L1 -5269 1261 1113 286 325 53 105 chr2 22115657 22116326 -231140257 - L2 LINE L2 -542 2772 2199 2660 77 0 0 chr2 22116326 22116675 -231139908 - L1PA8 LINE L1 0 6172 5824 286 325 53 105 chr2 22116675 22117280 -231139303 - L2 LINE L2 -1115 2199 1564 2198 111 3 0 chr2 22117371 22117668 -231138915 + AluSg SINE Alu 2 299 -11 366 259 36 54 chr2 22117764 22117930 -231138653 - MIR SINE MIR -3 259 97 243 326 47 0 chr2 22117958 22118044 -231138539 - MIR SINE MIR -155 107 18 231 313 43 18 chr2 22118747 22118910 -231137673 - L1ME LINE L1 -364 5757 5591 23 0 0 0 chr2 22118924 22118947 -231137636 + AT_rich Low_complexity Low_complexity 1 23 0 231 277 44 101 chr2 22121573 22121732 -231134851 - L3 LINE CR1 -48 1529 1380 359 320 26 26 chr2 22121780 22121936 -231134647 + MIR3 SINE MIR 25 180 -28 27 0 0 0 chr2 22121986 22122013 -231134570 + AT_rich Low_complexity Low_complexity 1 27 0 235 306 108 18 chr2 22123145 22123256 -231133327 + MIR SINE MIR 28 148 -114 1447 151 19 28 chr2 22123306 22123624 -231132959 - L1M2 LINE L1 -682 5618 5304 420 243 73 0 chr2 22123616 22123752 -231132831 - L1MA4 LINE L1 0 6300 6155 * 3373 160 23 21 chr2 22123730 22124516 -231132067 - L1M LINE L1 -815 5368 4586 2630 166 100 19 chr2 22124514 22125146 -231131437 + L1MA6 LINE L1 5605 6287 -13 * 610 339 91 16 chr2 22125274 22125660 -231130923 - LTR16B LTR ERVL -49 415 1 1345 313 131 57 chr2 22125746 22126740 -231129843 - L2 LINE L2 -353 2961 1895 811 160 15 0 chr2 22127448 22127579 -231129004 + FLAM_C SINE Alu 1 133 0 1010 289 74 16 chr2 22127874 22128237 -231128346 + L3 LINE CR1 1178 1561 -16 2057 148 28 3 chr2 22128452 22128816 -231127767 - Tigger4(Zombi) DNA MER2_type 0 2731 2359 454 176 24 0 chr2 22128838 22128923 -231127660 - Tigger4(Zombi) DNA MER2_type -2644 87 1 2871 207 29 88 chr2 22129414 22130720 -231125863 - L1M2 LINE L1 -597 5694 4482 2164 220 26 14 chr2 22130722 22131308 -231125275 - L1M2 LINE L1 -2234 3912 3320 1441 249 11 19 chr2 22131307 22131685 -231124898 + L1M3e LINE L1 1734 2108 -4922 * 7426 217 66 18 chr2 22131716 22133510 -231123073 + L1MA4A LINE L1 5 1884 -4965 5020 181 33 13 chr2 22133499 22135118 -231121465 + L1MA4A LINE L1 5359 6999 -6 * 978 268 42 67 chr2 22135146 22135817 -231120766 + L1M4c LINE L1 990 1643 -4741 261 344 142 16 chr2 22136181 22136428 -231120155 - L2 LINE L2 -44 3228 2951 671 236 133 10 chr2 22137135 22137338 -231119245 + MIR SINE MIR 15 242 -20 778 284 21 19 chr2 22139093 22139187 -231117396 - L2 LINE L2 -186 3127 3035 2190 107 7 0 chr2 22139187 22139476 -231117107 + AluSg SINE Alu 1 291 -19 778 284 21 19 chr2 22139476 22139729 -231116854 - L2 LINE L2 -278 3035 2780 374 280 128 44 chr2 22139757 22140007 -231116576 + L2 LINE L2 2819 3089 -224 287 247 10 21 chr2 22140014 22140111 -231116472 - LTR33A LTR ERVL -10 513 418 230 191 0 32 chr2 22140658 22140721 -231115862 + (CCA)n Simple_repeat Simple_repeat 3 63 0 279 114 0 0 chr2 22141225 22141269 -231115314 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 711 329 82 30 chr2 22141271 22141700 -231114883 - L2 LINE L2 -15 3257 2807 235 298 53 26 chr2 22141746 22141860 -231114723 - L2 LINE L2 -897 2417 2301 1227 114 6 6 chr2 22142119 22142294 -231114289 + AluSx SINE Alu 1 175 -137 2481 67 0 0 chr2 22142454 22142751 -231113832 + AluY SINE Alu 1 297 -14 1074 231 154 23 chr2 22142769 22143198 -231113385 + MLT1H LTR MaLR 35 555 0 371 303 9 9 chr2 22143220 22143329 -231113254 - HERVL LTR ERVL -1195 4459 4351 22 0 0 0 chr2 22144091 22144113 -231112470 + AT_rich Low_complexity Low_complexity 1 22 0 1569 192 47 27 chr2 22144205 22144570 -231112013 + THE1C LTR MaLR 4 375 0 260 338 47 20 chr2 22144825 22144973 -231111610 - MLT1J2 LTR MaLR -40 410 259 412 238 35 14 chr2 22145074 22145217 -231111366 - MER5C DNA MER1_type -96 228 83 3802 166 27 3 chr2 22145218 22145893 -231110690 - L1PA15 LINE L1 -7 6158 5468 373 291 148 13 chr2 22146902 22147132 -231109451 - L1MC/D LINE L1 -788 5571 5311 228 313 65 34 chr2 22147532 22147794 -231108789 - L1MC/D LINE L1 -1315 4831 4562 358 302 165 32 chr2 22148097 22148498 -231108085 - L1MC/D LINE L1 -2884 3262 2809 578 274 108 26 chr2 22148596 22149199 -231107384 - L1MC/D LINE L1 -3381 2765 2114 450 312 86 41 chr2 22149835 22150104 -231106479 - HAL1 LINE L1 -1111 1396 1116 14503 227 34 14 chr2 22150544 22152167 -231104416 - L1P4 LINE L1 -680 6923 5334 4634 59 7 2 chr2 22152167 22152760 -231103823 - L1PA7 LINE L1 0 6154 5559 14503 227 34 14 chr2 22152760 22153497 -231103086 - L1P4 LINE L1 -2269 5334 4613 1686 186 0 0 chr2 22153497 22153772 -231102811 - AluSx SINE Alu -11 301 27 14503 227 34 14 chr2 22153772 22156352 -231100231 - L1P4 LINE L1 -2990 4613 1884 318 284 57 0 chr2 22156353 22156441 -231100142 - MER5C DNA MER1_type -229 95 3 260 309 59 53 chr2 22156441 22156520 -231100063 - MLT1J2 LTR MaLR -297 153 71 2141 194 24 5 chr2 22156520 22156942 -231099641 - MSTB1 LTR MaLR 0 432 3 260 309 59 53 chr2 22156942 22157014 -231099569 - MLT1J2 LTR MaLR -379 71 1 206 340 41 48 chr2 22157560 22157707 -231098876 - L2 LINE L2 -844 2470 2325 1536 261 167 91 chr2 22158984 22159536 -231097047 + MLT1E2 LTR MaLR 5 598 -56 395 299 92 57 chr2 22160114 22160428 -231096155 - HAL1 LINE L1 -1291 1216 892 315 0 0 0 chr2 22160912 22160947 -231095636 + (TA)n Simple_repeat Simple_repeat 1 35 0 1927 106 4 29 chr2 22160963 22161238 -231095345 - AluSx SINE Alu -30 282 15 380 305 126 0 chr2 22161603 22161770 -231094813 - HAL1 LINE L1 -2318 189 2 219 139 0 0 chr2 22162255 22162291 -231094292 + (ATG)n Simple_repeat Simple_repeat 3 38 0 188 280 53 53 chr2 22163009 22163084 -231093499 + L3 LINE CR1 1370 1444 -133 376 213 68 108 chr2 22163232 22163437 -231093146 - MIR3 SINE MIR -28 180 31 271 346 51 56 chr2 22163672 22163906 -231092677 + L2 LINE L2 3030 3262 -10 906 280 115 7 chr2 22164782 22165061 -231091522 + MLT1I LTR MaLR 101 409 0 780 288 21 21 chr2 22166355 22166595 -231089988 - MIR SINE MIR 0 262 23 264 294 181 23 chr2 22166905 22167126 -231089457 + MIR SINE MIR 7 262 0 195 186 0 0 chr2 22169085 22169128 -231087455 + CT-rich Low_complexity Low_complexity 2 44 0 5197 130 66 2 chr2 22170532 22170873 -231085710 - L1PA13 LINE L1 -1 6162 5844 207 0 0 0 chr2 22170873 22170896 -231085687 + (TTA)n Simple_repeat Simple_repeat 2 24 0 5197 130 66 2 chr2 22170896 22171607 -231084976 - L1PA13 LINE L1 -319 5844 5047 368 177 13 25 chr2 22171608 22171687 -231084896 + AluJb SINE Alu 29 106 -196 207 338 54 0 chr2 22171749 22171823 -231084760 - MIR SINE MIR -131 131 54 234 352 96 0 chr2 22171980 22172105 -231084478 - MIR SINE MIR -124 138 2 513 306 73 16 chr2 22172125 22172370 -231084213 - MIR SINE MIR -3 259 1 215 280 0 20 chr2 22172489 22172539 -231084044 - L2 LINE L2 -226 3046 2998 857 219 5 19 chr2 22173362 22173572 -231083011 - L1MB8 LINE L1 0 6178 5972 930 216 30 15 chr2 22173914 22174113 -231082470 - MER82 DNA MER2_type 0 653 452 267 352 48 14 chr2 22174153 22174298 -231082285 + MIR SINE MIR 2 151 -111 49 32 0 0 chr2 22174341 22174404 -231082179 + AT_rich Low_complexity Low_complexity 1 63 0 284 284 0 23 chr2 22174407 22174495 -231082088 - MER82 DNA MER2_type -567 86 1 238 238 16 16 chr2 22174834 22174897 -231081686 - MLT1J LTR MaLR -146 365 303 26 0 0 0 chr2 22175782 22175808 -231080775 + AT_rich Low_complexity Low_complexity 1 26 0 29 28 0 0 chr2 22175885 22175921 -231080662 + AT_rich Low_complexity Low_complexity 1 36 0 389 337 47 11 chr2 22176307 22176497 -231080086 + MIR SINE MIR 7 203 -59 340 294 33 0 chr2 22176589 22176681 -231079902 + polypurine Low_complexity Low_complexity 6 100 0 873 203 50 68 chr2 22177230 22177452 -231079131 + MER20 DNA MER1_type 2 219 0 27 62 0 0 chr2 22178135 22178183 -231078400 + AT_rich Low_complexity Low_complexity 1 48 0 241 300 0 0 chr2 22179121 22179191 -231077392 + L1ME LINE L1 2959 3028 -3118 310 336 139 40 chr2 22179437 22179913 -231076670 + L1ME LINE L1 3291 3813 -2333 282 282 29 10 chr2 22180432 22180535 -231076048 + L1ME LINE L1 4506 4610 -1536 42508 36 23 1 chr2 22181111 22187149 -231069434 - L1PA3 LINE L1 0 6155 1 289 297 7 36 chr2 22187750 22187888 -231068695 + L1ME LINE L1 5612 5745 -376 286 242 125 92 chr2 22188727 22188847 -231067736 - L2 LINE L2 -1 3312 3189 248 224 0 0 chr2 22189093 22189142 -231067441 + MER3 DNA MER1_type 42 90 -119 * 258 204 32 54 chr2 22189121 22189214 -231067369 - MER3 DNA MER1_type -118 91 1 1985 139 0 0 chr2 22189243 22189524 -231067059 - AluSx SINE Alu -29 283 3 638 318 218 3 chr2 22190915 22191236 -231065347 - L2 LINE L2 0 3313 2924 333 283 25 33 chr2 22191232 22191352 -231065231 - L2 LINE L2 -580 2734 2616 * 248 169 51 0 chr2 22191988 22192047 -231064536 - L1MCa LINE L1 -4359 2067 2006 245 182 18 0 chr2 22192047 22192102 -231064481 + (TA)n Simple_repeat Simple_repeat 1 56 0 33 0 0 0 chr2 22192652 22192685 -231063898 + AT_rich Low_complexity Low_complexity 1 33 0 185 286 48 32 chr2 22193289 22193352 -231063231 - L2 LINE L2 -18 3295 3232 1942 130 3 3 chr2 22194307 22194618 -231061965 + AluSx SINE Alu 1 311 0 2659 244 99 40 chr2 22195306 22196362 -231060221 + L1MC4 LINE L1 6884 8002 -40 363 238 38 12 chr2 22196369 22196529 -231060054 + (TA)n Simple_repeat Simple_repeat 2 165 0 527 211 18 0 chr2 22196619 22196733 -231059850 - L1MD2 LINE L1 -4 6355 6240 230 81 0 0 chr2 22196733 22196770 -231059813 + L1MC4 LINE L1 8006 8042 0 304 318 63 8 chr2 22197017 22197143 -231059440 + MIR SINE MIR 121 253 -9 21 0 0 0 chr2 22197706 22197727 -231058856 + AT_rich Low_complexity Low_complexity 1 21 0 679 142 97 0 chr2 22198057 22198191 -231058392 + L1MA4 LINE L1 6147 6293 -7 249 286 224 56 chr2 22198493 22198654 -231057929 + MIR SINE MIR 3 190 -72 1637 186 3 7 chr2 22200885 22201181 -231055402 + 7SLRNA srpRNA srpRNA 1 295 -25 3496 238 42 8 chr2 22201647 22202538 -231054045 - L1MB5 LINE L1 0 6672 5752 2013 234 76 33 chr2 22202557 22203345 -231053238 - L1MB5 LINE L1 -4741 1905 1043 444 123 12 12 chr2 22203345 22203426 -231053157 - L1PA10 LINE L1 -10 6158 6078 2013 234 76 33 chr2 22203426 22203661 -231052922 - L1MB5 LINE L1 -5603 1043 820 270 350 87 0 chr2 22205474 22205577 -231051006 - L2 LINE L2 -18 3254 3143 295 314 13 70 chr2 22205674 22205733 -231050850 - MER5A DNA MER1_type -26 163 102 1788 133 98 14 chr2 22205733 22206079 -231050504 + THE1C LTR MaLR 1 375 0 295 314 13 70 chr2 22206079 22206175 -231050408 - MER5A DNA MER1_type -87 102 17 1596 180 70 44 chr2 22207090 22207473 -231049110 - MER21B LTR ERV1 -11 852 460 850 224 90 0 chr2 22207469 22207670 -231048913 + MLT1E2 LTR MaLR 406 624 -2 * 193 238 0 0 chr2 22209195 22209237 -231047346 - MIR SINE MIR -116 146 105 2619 82 0 3 chr2 22209472 22209837 -231046746 - L1P LINE L1 -3961 2185 1822 1968 62 23 0 chr2 22209837 22210093 -231046490 + L1PA6 LINE L1 5893 6154 0 313 353 26 7 chr2 22210569 22210722 -231045861 + MIR SINE MIR 94 249 -13 366 273 106 45 chr2 22211857 22212048 -231044535 - MIR SINE MIR 0 262 55 213 268 24 126 chr2 22212417 22212544 -231044039 + L2 LINE L2 3141 3254 -18 25 51 0 0 chr2 22213000 22213039 -231043544 + AT_rich Low_complexity Low_complexity 1 39 0 212 255 0 0 chr2 22214112 22214159 -231042424 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 22214782 22214821 -231041762 + AT_rich Low_complexity Low_complexity 1 39 0 231 204 20 0 chr2 22215461 22215510 -231041073 + (CA)n Simple_repeat Simple_repeat 2 51 0 180 0 0 0 chr2 22215604 22215624 -231040959 + (TTA)n Simple_repeat Simple_repeat 3 22 0 1387 62 6 0 chr2 22215624 22215802 -231040781 - L1PA7 LINE L1 -18 6136 5958 335 360 64 12 chr2 22216368 22216540 -231040043 - MIR SINE MIR -46 216 36 265 367 33 0 chr2 22216579 22216699 -231039884 + MIR3 SINE MIR 40 163 -45 255 255 83 83 chr2 22218549 22218741 -231037842 + L2 LINE L2 1808 1999 -1315 22 0 0 0 chr2 22218772 22218794 -231037789 + AT_rich Low_complexity Low_complexity 1 22 0 2239 127 8 23 chr2 22218981 22219352 -231037231 + THE1B LTR MaLR 1 428 0 518 336 61 9 chr2 22220368 22220582 -231036001 - MIR SINE MIR -18 244 20 631 280 24 6 chr2 22221053 22221221 -231035362 + MER5B DNA MER1_type 1 171 -7 2059 146 10 0 chr2 22221421 22221723 -231034860 + AluSx SINE Alu 1 305 -7 400 298 55 29 chr2 22221971 22222176 -231034407 - MIR SINE MIR -24 238 30 1855 115 22 15 chr2 22224200 22224469 -231032114 + AluSp SINE Alu 26 296 -17 502 325 48 17 chr2 22225220 22225451 -231031132 + MIR SINE MIR 23 260 -2 562 205 30 95 chr2 22226421 22226621 -231029962 + MER5A DNA MER1_type 1 187 -2 2233 107 0 7 chr2 22227951 22228261 -231028322 - AluSc SINE Alu -1 308 1 912 191 8 89 chr2 22228347 22228604 -231027979 - L1MA9 LINE L1 -38 6274 6039 1444 116 5 0 chr2 22228605 22228829 -231027754 - HSMAR2 DNA Mariner -1 1301 1077 300 365 56 0 chr2 22228976 22229083 -231027500 + L2 LINE L2 3115 3227 -45 480 333 57 37 chr2 22229248 22229494 -231027089 - MIR SINE MIR -10 252 2 241 184 20 0 chr2 22229529 22229578 -231027005 + GA-rich Low_complexity Low_complexity 4 53 0 1439 293 160 25 chr2 22229712 22230545 -231026038 + L2 LINE L2 2243 3189 -124 745 317 90 15 chr2 22230594 22230862 -231025721 + MER45C DNA AcHobo 1 288 -665 1262 201 0 62 chr2 22230865 22231153 -231025430 - AluJo SINE Alu -14 298 29 300 196 0 0 chr2 22231449 22231500 -231025083 + MER45 DNA AcHobo 1530 1580 -1 202 232 36 18 chr2 22231544 22231600 -231024983 + L2 LINE L2 3254 3310 -3 364 274 63 29 chr2 22234109 22234284 -231022299 + L1ME LINE L1 5520 5700 -421 309 279 41 41 chr2 22234377 22234499 -231022084 + L1ME LINE L1 5544 5665 -2143 566 205 139 36 chr2 22234544 22234710 -231021873 - MER58A DNA MER1_type -1 223 41 22 0 0 0 chr2 22234841 22234863 -231021720 + AT_rich Low_complexity Low_complexity 1 22 0 601 285 186 44 chr2 22235124 22235584 -231020999 - MLT1H1 LTR MaLR -72 495 1 22 0 0 0 chr2 22235621 22235643 -231020940 + AT_rich Low_complexity Low_complexity 1 22 0 425 284 54 64 chr2 22236998 22237294 -231019289 + MLT1L LTR MaLR 6 298 -317 272 252 0 10 chr2 22237325 22237428 -231019155 + (TA)n Simple_repeat Simple_repeat 1 102 0 261 222 0 0 chr2 22237462 22237525 -231019058 + (TG)n Simple_repeat Simple_repeat 2 64 0 706 250 28 0 chr2 22237526 22237670 -231018913 - FRAM SINE Alu -25 151 4 530 268 70 0 chr2 22237681 22237823 -231018760 + MLT1L LTR MaLR 341 492 -123 302 359 56 0 chr2 22237925 22238092 -231018491 + MIR SINE MIR 32 206 -56 853 160 15 73 chr2 22238316 22238522 -231018061 + L1MA9 LINE L1 6119 6312 0 1205 109 11 5 chr2 22238948 22239132 -231017451 - L1PB2 LINE L1 0 6151 5967 260 281 52 30 chr2 22240036 22240171 -231016412 + L1ME2 LINE L1 6016 6153 -11 312 314 69 25 chr2 22240295 22240454 -231016129 + L1ME LINE L1 5676 5841 -280 3314 153 20 15 chr2 22240495 22241089 -231015494 + L1MC1 LINE L1 5601 6197 -136 22 56 0 0 chr2 22241148 22241184 -231015399 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr2 22241629 22241657 -231014926 + AT_rich Low_complexity Low_complexity 1 28 0 532 267 108 46 chr2 22241891 22242344 -231014239 + L1ME4a LINE L1 5355 5835 -286 613 316 80 4 chr2 22242393 22242630 -231013953 + MIR SINE MIR 7 261 -1 276 291 47 12 chr2 22244192 22244278 -231012305 - L2 LINE L2 -20 3293 3205 1898 131 31 69 chr2 22244485 22244835 -231011748 - MER1B DNA MER1_type 0 337 1 201 121 0 0 chr2 22245252 22245285 -231011298 + (CAATT)n Simple_repeat Simple_repeat 3 35 0 286 252 35 112 chr2 22246035 22246178 -231010405 + MIR SINE MIR 20 151 -111 393 188 0 0 chr2 22247105 22247185 -231009398 + (CA)n Simple_repeat Simple_repeat 2 81 0 181 148 93 0 chr2 22248258 22248312 -231008271 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 343 288 63 44 chr2 22248551 22248756 -231007827 + LTR33A LTR ERVL 312 520 -3 21 36 0 0 chr2 22249430 22249458 -231007125 + AT_rich Low_complexity Low_complexity 1 28 0 1781 133 0 4 chr2 22251376 22251631 -231004952 - AluSx SINE Alu -2 310 57 859 138 0 0 chr2 22251633 22251756 -231004827 - AluSq/x SINE Alu -189 123 1 201 359 41 14 chr2 22254770 22254915 -231001668 - MIR SINE MIR -46 216 68 22 0 0 0 chr2 22255141 22255163 -231001420 + AT_rich Low_complexity Low_complexity 1 22 0 1088 162 17 6 chr2 22256311 22256490 -231000093 + MER5A DNA MER1_type 2 182 -7 387 327 39 6 chr2 22256701 22256857 -230999726 + MIR SINE MIR 47 207 -55 185 422 0 20 chr2 22258231 22258333 -230998250 - MIR SINE MIR -85 123 24 24 53 0 0 chr2 22258554 22258592 -230997991 + AT_rich Low_complexity Low_complexity 1 38 0 1944 93 0 12 chr2 22258692 22258949 -230997634 + AluSg SINE Alu 46 299 -11 2223 123 23 11 chr2 22259566 22259917 -230996666 - THE1A LTR MaLR 0 355 1 11072 118 4 3 chr2 22259917 22261495 -230995088 - THE1A-int LTR MaLR 0 1580 1 2266 113 14 11 chr2 22261495 22261849 -230994734 - THE1A LTR MaLR 0 355 1 443 259 7 43 chr2 22261933 22262072 -230994511 - MIR SINE MIR -37 225 92 11362 228 23 9 chr2 22263307 22267266 -230989317 + L1PA16 LINE L1 2150 6162 -4 767 159 153 0 chr2 22267265 22267428 -230989155 - L1M3 LINE L1 -534 5800 5613 * 1779 178 42 28 chr2 22267450 22267922 -230988661 - MLT2A2 LTR ERVL -68 486 6 1605 229 70 11 chr2 22267934 22268466 -230988117 - L1M3c LINE L1 -4531 1610 1048 235 287 14 35 chr2 22268507 22268650 -230987933 + CT-rich Low_complexity Low_complexity 3 142 0 213 39 0 0 chr2 22268693 22268719 -230987864 + (TG)n Simple_repeat Simple_repeat 1 26 0 245 274 0 40 chr2 22268883 22269007 -230987576 + CT-rich Low_complexity Low_complexity 2 120 0 23 0 0 0 chr2 22269070 22269093 -230987490 + AT_rich Low_complexity Low_complexity 1 23 0 315 335 79 70 chr2 22269297 22269930 -230986653 - HAL1 LINE L1 -962 1545 907 1810 140 0 76 chr2 22271182 22271355 -230985228 - AluSx SINE Alu -8 304 166 489 62 0 0 chr2 22271355 22271420 -230985163 + (TG)n Simple_repeat Simple_repeat 2 66 0 1810 140 0 76 chr2 22271420 22271575 -230985008 - AluSx SINE Alu -146 166 1 29 106 0 0 chr2 22272491 22272604 -230983979 + AT_rich Low_complexity Low_complexity 1 113 0 877 201 13 0 chr2 22272632 22272786 -230983797 + FRAM SINE Alu 3 158 -18 2433 71 0 0 chr2 22273121 22273429 -230983154 + AluY SINE Alu 1 308 -3 226 345 36 50 chr2 22273520 22273659 -230982924 - L2 LINE L2 0 3313 3177 670 172 0 0 chr2 22274072 22274194 -230982389 - pTR5 LTR ERV1 -1576 862 741 3660 51 32 0 chr2 22274232 22274702 -230981881 + L1PA7 LINE L1 5660 6144 -10 1658 253 90 21 chr2 22276172 22276998 -230979585 + L1M4 LINE L1 2521 3403 -2743 316 245 88 0 chr2 22277711 22277813 -230978770 - MIR SINE MIR -1 261 151 21 36 0 0 chr2 22277959 22277987 -230978596 + AT_rich Low_complexity Low_complexity 1 28 0 1330 191 165 45 chr2 22278092 22278474 -230978109 + MSTC LTR MaLR 1 428 0 2253 68 7 23 chr2 22278855 22279162 -230977421 - AluY SINE Alu -9 302 1 23 33 0 0 chr2 22279673 22279703 -230976880 + AT_rich Low_complexity Low_complexity 1 30 0 364 291 66 20 chr2 22281692 22281843 -230974740 - MIR SINE MIR -24 238 81 550 123 12 0 chr2 22281967 22282048 -230974535 + L1PB2 LINE L1 6023 6104 -47 939 216 51 47 chr2 22282071 22282223 -230974360 + MER2 DNA MER2_type 88 243 -102 2246 98 0 29 chr2 22282223 22282530 -230974053 + AluY SINE Alu 1 298 -13 939 216 51 47 chr2 22282530 22282631 -230973952 + MER2 DNA MER2_type 243 342 -3 3454 181 78 9 chr2 22282632 22283367 -230973216 - L1 LINE L1 -1732 4414 3630 227 277 15 31 chr2 22283531 22283596 -230972987 - MLT1I LTR MaLR -280 129 66 1813 132 33 10 chr2 22283604 22283907 -230972676 - AluSg SINE Alu 0 310 1 403 293 57 8 chr2 22284580 22284754 -230971829 - MIR SINE MIR -10 252 34 207 151 57 19 chr2 22285085 22285138 -230971445 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 916 284 94 79 chr2 22285751 22286347 -230970236 - MER77 LTR ERV1 0 605 1 272 277 125 43 chr2 22286520 22286690 -230969893 - MLT1I LTR MaLR -184 225 42 455 299 120 14 chr2 22287125 22287342 -230969241 - MIR SINE MIR -11 251 12 2386 103 16 47 chr2 22287760 22287799 -230968784 - THE1C LTR MaLR 0 375 336 2188 132 0 0 chr2 22287799 22288109 -230968474 + AluSx SINE Alu 1 310 -2 2386 103 16 47 chr2 22288109 22288456 -230968127 - THE1C LTR MaLR -39 336 1 15464 28 6 1 chr2 22288678 22291305 -230965278 + L1PA3 LINE L1 3533 6167 0 306 50 0 0 chr2 22291968 22292008 -230964575 + (TG)n Simple_repeat Simple_repeat 2 41 0 260 307 23 11 chr2 22292443 22292531 -230964052 + L2 LINE L2 2502 2590 -724 1248 138 47 63 chr2 22292531 22292785 -230963798 - MER1B DNA MER1_type 0 339 130 278 234 26 26 chr2 22292814 22292891 -230963692 + L2 LINE L2 2577 2653 -661 2260 66 10 13 chr2 22293181 22293486 -230963097 - L1PA8 LINE L1 0 6172 5869 5419 171 25 14 chr2 22293523 22294034 -230962549 - L1MA8 LINE L1 -3 6288 5784 2485 59 3 10 chr2 22294034 22294340 -230962243 - AluY SINE Alu -6 305 2 5419 171 25 14 chr2 22294340 22295685 -230960898 - L1MA8 LINE L1 -507 5784 4411 211 189 0 0 chr2 22295719 22295756 -230960827 + (CCCTAA)n Simple_repeat Simple_repeat 1 37 0 1926 178 28 3 chr2 22295802 22296157 -230960426 - THE1B LTR MaLR 0 364 1 376 194 0 0 chr2 22296181 22296253 -230960330 + L1PB1 LINE L1 129 200 -6663 1364 148 12 27 chr2 22296255 22296512 -230960071 + L1PB1 LINE L1 636 888 -5975 * 8115 204 59 39 chr2 22296509 22296796 -230959787 + L1PB1 LINE L1 3217 3497 -3365 231 211 0 39 chr2 22296796 22296848 -230959735 + LTR27 LTR ERV1 587 636 0 8115 204 59 39 chr2 22296848 22298851 -230957732 + L1PB1 LINE L1 3497 5604 -1258 1805 179 39 26 chr2 22298851 22299405 -230957178 + MLT2A2 LTR ERVL 1 554 0 4280 139 14 9 chr2 22299406 22300452 -230956131 + L1PB1 LINE L1 5601 6653 -214 24789 56 39 3 chr2 22300615 22304049 -230952534 - L1P LINE L1 -2589 3557 1 200 225 14 14 chr2 22304519 22304590 -230951993 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 310 215 112 116 chr2 22304605 22304669 -230951914 - L1ME4a LINE L1 -201 5920 5857 276 30 0 0 chr2 22304669 22304702 -230951881 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 215 112 116 chr2 22304702 22304792 -230951791 - L1ME4a LINE L1 -264 5857 5765 1846 124 7 25 chr2 22304792 22305067 -230951516 - AluSp SINE Alu -5 308 39 310 215 112 116 chr2 22305067 22305144 -230951439 - L1ME4a LINE L1 -356 5765 5689 194 375 23 16 chr2 22305711 22305724 -230950859 + L2 LINE L2 2851 2862 -410 387 0 0 0 chr2 22305724 22305767 -230950816 + (TG)n Simple_repeat Simple_repeat 2 44 0 194 375 23 16 chr2 22305767 22305881 -230950702 + L2 LINE L2 2862 2979 -293 210 71 0 0 chr2 22305961 22305989 -230950594 + (TG)n Simple_repeat Simple_repeat 1 28 0 1546 199 59 0 chr2 22306948 22307269 -230949314 + Tigger7 DNA MER2_type 1 340 -393 778 150 8 0 chr2 22307282 22307415 -230949168 + Tigger7 DNA MER2_type 2454 2587 0 1003 329 50 2 chr2 22307653 22308073 -230948510 + L1M2 LINE L1 11 450 -6399 10744 225 59 18 chr2 22308938 22309505 -230947078 + L1P5 LINE L1 1071 1613 -5245 2178 118 0 0 chr2 22309505 22309802 -230946781 + AluY SINE Alu 1 297 -14 10744 225 59 18 chr2 22309802 22314391 -230942192 + L1P5 LINE L1 1613 6418 -440 214 255 104 28 chr2 22314646 22314752 -230941831 - L2 LINE L2 0 3313 3200 241 296 119 63 chr2 22317401 22317560 -230939023 - MIR SINE MIR -60 202 35 3290 147 11 11 chr2 22318839 22319363 -230937220 + MER1A DNA MER1_type 4 527 0 362 284 65 60 chr2 22319625 22319826 -230936757 - LTR33 LTR ERVL -319 202 1 858 321 148 32 chr2 22319895 22320575 -230936008 + L2 LINE L2 2122 2722 -591 2128 118 65 8 chr2 22320575 22320930 -230935653 - THE1C LTR MaLR 0 375 1 7197 182 34 34 chr2 22320930 22322510 -230934073 - THE1C-int LTR MaLR 0 1580 1 2212 126 41 16 chr2 22322510 22322876 -230933707 - THE1C LTR MaLR 0 375 1 858 321 148 32 chr2 22322876 22323239 -230933344 + L2 LINE L2 2721 3312 -1 21 71 0 0 chr2 22323500 22323542 -230933041 + AT_rich Low_complexity Low_complexity 1 42 0 180 250 0 0 chr2 22324117 22324157 -230932426 + L2 LINE L2 3274 3313 0 370 312 41 7 chr2 22324445 22324596 -230931987 + MIR SINE MIR 52 206 -56 323 295 8 78 chr2 22325516 22325645 -230930938 - L2 LINE L2 -219 3053 2934 2150 130 3 0 chr2 22325864 22326165 -230930418 + AluSp SINE Alu 1 302 -11 427 328 206 23 chr2 22326332 22326972 -230929611 - L2 LINE L2 -809 2505 1749 2346 115 0 0 chr2 22327987 22328299 -230928284 + AluSx SINE Alu 1 312 0 278 304 20 20 chr2 22328471 22328573 -230928010 - MLT1I LTR MaLR -189 220 119 361 287 154 47 chr2 22328952 22329231 -230927352 + L2 LINE L2 3005 3313 0 268 82 20 20 chr2 22329720 22329769 -230926814 + (TC)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr2 22329992 22330020 -230926563 + AT_rich Low_complexity Low_complexity 1 28 0 2157 104 7 13 chr2 22331013 22331312 -230925271 + AluY SINE Alu 1 297 -14 348 24 0 0 chr2 22331315 22331356 -230925227 + (GA)n Simple_repeat Simple_repeat 2 42 0 285 29 0 0 chr2 22332860 22332894 -230923689 + (A)n Simple_repeat Simple_repeat 1 34 0 331 347 71 31 chr2 22333921 22334117 -230922466 + MIR SINE MIR 33 236 -26 292 93 19 19 chr2 22334774 22334828 -230921755 + (TTCC)n Simple_repeat Simple_repeat 4 57 0 325 111 16 32 chr2 22335249 22335312 -230921271 - MLT2B1 LTR ERVL 0 520 459 270 261 15 0 chr2 22335338 22335403 -230921180 + (CATA)n Simple_repeat Simple_repeat 3 68 0 6387 144 11 0 chr2 22335403 22336450 -230920133 - HSMAR2 DNA Mariner -2 1300 242 620 206 29 29 chr2 22336458 22336628 -230919955 - MLT2B1 LTR ERVL -350 170 1 237 365 61 0 chr2 22337982 22338097 -230918486 + L2 LINE L2 3183 3304 -9 2030 143 0 31 chr2 22338225 22338547 -230918036 + AluSx SINE Alu 1 312 0 1166 200 0 4 chr2 22339225 22339455 -230917128 + MSTB LTR MaLR 1 229 -197 299 164 0 30 chr2 22339455 22339522 -230917061 + CT-rich Low_complexity Low_complexity 2 66 0 1027 178 50 0 chr2 22339522 22339741 -230916842 + MSTB LTR MaLR 203 432 0 230 349 72 68 chr2 22339771 22340006 -230916577 - L2 LINE L2 -1898 1416 1181 220 360 73 0 chr2 22340631 22340781 -230915802 + L2 LINE L2 3146 3306 -7 729 204 91 42 chr2 22341294 22341558 -230915025 + L1ME3A LINE L1 5881 6157 -13 407 292 64 26 chr2 22341576 22341851 -230914732 + L1ME LINE L1 5211 5493 -671 359 277 262 0 chr2 22341851 22342057 -230914526 - MIR SINE MIR -1 261 2 340 247 72 54 chr2 22342686 22342852 -230913731 + L1MEc LINE L1 2192 2360 -4036 188 338 120 15 chr2 22343389 22343522 -230913061 - L2 LINE L2 -909 2405 2259 385 299 26 62 chr2 22343606 22343750 -230912833 - HAL1b LINE L1 -602 746 598 197 33 33 0 chr2 22343750 22343780 -230912803 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 385 299 26 62 chr2 22343780 22343978 -230912605 - HAL1b LINE L1 -750 598 421 1769 39 0 5 chr2 22343978 22344185 -230912398 + AluY SINE Alu 100 305 -6 385 299 26 62 chr2 22344185 22344293 -230912290 - HAL1b LINE L1 -927 421 311 358 208 10 40 chr2 22344357 22344458 -230912125 - MLT1J LTR MaLR -13 498 401 * 481 306 33 27 chr2 22344453 22344636 -230911947 - MLT1J LTR MaLR -233 278 95 22 56 0 0 chr2 22345353 22345389 -230911194 + AT_rich Low_complexity Low_complexity 1 36 0 2218 93 3 7 chr2 22346077 22346368 -230910215 - AluSg1 SINE Alu -19 290 1 382 309 164 5 chr2 22348093 22348294 -230908289 + MIR SINE MIR 9 241 -21 244 192 58 0 chr2 22348524 22348576 -230908007 + MER3 DNA MER1_type 36 90 -119 * 829 218 5 35 chr2 22348546 22348743 -230907840 - MER3 DNA MER1_type -13 196 6 237 297 126 0 chr2 22350296 22350407 -230906176 - Charlie8 DNA MER1_type -2215 202 78 279 302 40 24 chr2 22350592 22350718 -230905865 + MIR SINE MIR 20 147 -61 201 314 49 29 chr2 22351875 22351977 -230904606 + MIR SINE MIR 97 200 -62 488 322 49 11 chr2 22352963 22353146 -230903437 + MIR SINE MIR 4 193 -69 1757 169 0 7 chr2 22353427 22353705 -230902878 - AluJb SINE Alu -23 289 14 315 246 22 84 chr2 22354072 22354213 -230902370 + MIR SINE MIR 32 162 -46 222 321 46 46 chr2 22355939 22356070 -230900513 - MIR3 SINE MIR -41 167 37 1965 58 4 25 chr2 22357326 22357603 -230898980 + L1PA4 LINE L1 5882 6152 -3 275 141 0 42 chr2 22357636 22357707 -230898876 + L1MA7 LINE L1 6223 6290 -1 21 57 0 0 chr2 22357707 22357742 -230898841 + AT_rich Low_complexity Low_complexity 1 35 0 280 191 0 0 chr2 22357837 22357884 -230898699 - L2 LINE L2 -9 3304 3258 511 180 0 6 chr2 22357943 22358051 -230898532 - L1ME2 LINE L1 -2 6332 6073 285 253 147 27 chr2 22358409 22358559 -230898024 - MIR SINE MIR -78 184 17 195 42 0 0 chr2 22358611 22358635 -230897948 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 414 295 152 35 chr2 22359729 22360274 -230896309 + L1ME4a LINE L1 5258 5866 -255 321 270 143 32 chr2 22360688 22360814 -230895769 - MER91B DNA MER1_type -11 179 40 190 298 88 35 chr2 22361138 22361252 -230895331 + MIR SINE MIR 131 250 -12 297 0 0 0 chr2 22361573 22361606 -230894977 + (TG)n Simple_repeat Simple_repeat 2 34 0 596 40 13 0 chr2 22362560 22362636 -230893947 + L1PA10 LINE L1 6091 6167 -1 185 273 52 26 chr2 22363652 22363729 -230892854 - L2 LINE L2 -12 3260 3182 * 296 254 140 18 chr2 22363717 22363831 -230892752 - MIR SINE MIR -95 167 40 289 357 36 0 chr2 22364043 22364155 -230892428 + L2 LINE L2 3157 3272 0 1765 120 33 0 chr2 22365136 22365412 -230891171 + L1PB2 LINE L1 5864 6148 -3 427 216 94 35 chr2 22365435 22365745 -230890838 - LTR48 LTR ERV1 -1 739 284 207 167 0 0 chr2 22365963 22365999 -230890584 + (TAG)n Simple_repeat Simple_repeat 3 38 0 285 213 38 12 chr2 22367204 22367284 -230889299 + L1ME2 LINE L1 1269 1350 -5073 * 290 234 209 6 chr2 22367279 22367437 -230889146 + L1ME2 LINE L1 3097 3286 -3655 733 297 87 77 chr2 22367437 22368212 -230888371 + L1MB5 LINE L1 3 784 -5758 2959 248 38 7 chr2 22368423 22369374 -230887209 + L1MB5 LINE L1 1328 2406 -4240 5496 248 24 76 chr2 22369389 22371728 -230884855 + L1MB5 LINE L1 3238 5455 -1189 2433 171 37 4 chr2 22371728 22372218 -230884365 + L1MA5 LINE L1 5795 6300 0 1884 167 0 0 chr2 22372240 22372552 -230884031 + AluSx SINE Alu 1 312 0 3889 228 28 25 chr2 22372683 22373911 -230882672 + L1MB5 LINE L1 5441 6664 -8 4844 255 73 50 chr2 22373920 22375662 -230880921 + L1ME2 LINE L1 3268 5099 -1842 1955 128 4 4 chr2 22375662 22375966 -230880617 + AluSg SINE Alu 1 304 0 4844 255 73 50 chr2 22375966 22376943 -230879640 + L1ME2 LINE L1 5099 6052 -889 378 0 0 0 chr2 22376943 22376985 -230879598 + (TA)n Simple_repeat Simple_repeat 1 42 0 2226 243 32 61 chr2 22377088 22377936 -230878647 + L1ME2 LINE L1 6113 6935 -24 252 345 137 13 chr2 22378091 22378317 -230878266 - MIR SINE MIR -1 261 8 297 339 51 21 chr2 22378470 22378706 -230877877 + L1ME LINE L1 6212 6454 -505 342 278 46 19 chr2 22380289 22380397 -230876186 + MIR SINE MIR 81 191 -71 518 351 85 37 chr2 22380772 22381314 -230875269 + L2 LINE L2 2141 2708 -606 207 349 139 16 chr2 22381521 22381650 -230874933 + L2 LINE L2 3034 3178 -94 602 281 46 10 chr2 22382701 22382897 -230873686 + MIR SINE MIR 2 204 -58 185 170 0 113 chr2 22382923 22382947 -230873636 + MIR SINE MIR 201 217 -45 2074 133 44 22 chr2 22382947 22383314 -230873269 - THE1C LTR MaLR 0 375 1 185 170 0 113 chr2 22383314 22383342 -230873241 + MIR SINE MIR 217 247 -15 213 354 25 0 chr2 22383901 22383980 -230872603 - L2 LINE L2 -2 3270 3190 1544 158 4 8 chr2 22383982 22384229 -230872354 + AluSx SINE Alu 1 246 -66 1011 161 0 0 chr2 22384245 22384425 -230872158 + (TA)n Simple_repeat Simple_repeat 1 180 0 297 239 23 0 chr2 22384432 22384520 -230872063 - L1MC4 LINE L1 -1339 6703 6614 237 303 0 0 chr2 22384512 22384601 -230871982 + L1MC4 LINE L1 6614 6702 -1340 * 264 209 121 0 chr2 22384566 22384657 -230871926 - L1MC4 LINE L1 -1339 6703 6602 261 138 11 23 chr2 22384695 22384782 -230871801 + (TA)n Simple_repeat Simple_repeat 1 86 0 234 274 9 9 chr2 22384782 22384888 -230871695 - L1MC4 LINE L1 -1323 6719 6614 268 354 145 36 chr2 22385378 22385426 -230871157 - L2 LINE L2 -666 2648 2607 1957 225 65 54 chr2 22385426 22386057 -230870526 - LTR48B LTR ERV1 -4 640 3 268 354 145 36 chr2 22386057 22386672 -230869911 - L2 LINE L2 -707 2607 1913 4088 114 21 6 chr2 22386868 22387492 -230869091 - MER41B LTR ERV1 -2 633 1 2729 205 98 13 chr2 22388898 22389604 -230866979 - L1MC3 LINE L1 -15 7770 7005 4623 145 30 18 chr2 22389605 22390427 -230866156 + L1PB3 LINE L1 5322 6153 -1 620 141 5 174 chr2 22390435 22390648 -230865935 - L1MC3 LINE L1 -785 7000 6824 238 288 0 0 chr2 22390661 22390734 -230865849 + L1MC4 LINE L1 6624 6696 -1346 255 31 0 0 chr2 22390734 22390766 -230865817 + (TG)n Simple_repeat Simple_repeat 1 32 0 999 221 0 71 chr2 22390766 22391000 -230865583 - L1MC3 LINE L1 -977 6808 6596 1528 175 51 31 chr2 22391000 22391292 -230865291 + AluJo SINE Alu 7 304 -8 999 221 0 71 chr2 22391292 22391337 -230865246 - L1MC3 LINE L1 -1189 6596 6549 925 159 33 11 chr2 22391339 22391521 -230865062 + MSTB2 LTR MaLR 272 457 0 3620 195 37 36 chr2 22391543 22392476 -230864107 - L1MC3 LINE L1 -748 5398 5276 893 237 64 10 chr2 22392543 22392838 -230863745 - L1MC3 LINE L1 -857 5289 4979 411 224 0 9 chr2 22392859 22392975 -230863608 + CT-rich Low_complexity Low_complexity 3 117 0 722 277 75 0 chr2 22392980 22393247 -230863336 - L1MC3 LINE L1 -1213 4933 4647 180 0 0 0 chr2 22393247 22393267 -230863316 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1137 222 13 0 chr2 22393280 22393514 -230863069 - AluJb SINE Alu -43 269 33 1481 278 30 4 chr2 22393514 22394040 -230862543 - L1MC3 LINE L1 -1490 4656 4117 1238 222 27 7 chr2 22394061 22394354 -230862229 - L1MC3 LINE L1 -1999 4147 3849 718 264 19 11 chr2 22394358 22394619 -230861964 + L1MB8 LINE L1 3185 3447 -2699 1737 158 152 8 chr2 22394620 22394994 -230861589 + MSTA LTR MaLR 1 428 0 633 239 30 30 chr2 22395041 22395242 -230861341 + L1MB8 LINE L1 3636 3836 -2310 22 0 0 0 chr2 22396461 22396483 -230860100 + AT_rich Low_complexity Low_complexity 1 22 0 298 264 28 19 chr2 22396760 22396866 -230859717 - MER89-int LTR ERV1 -4454 2347 2241 38 22 0 0 chr2 22397227 22397272 -230859311 + AT_rich Low_complexity Low_complexity 1 45 0 2434 246 31 20 chr2 22397337 22398150 -230858433 + L1MB8 LINE L1 4335 5156 -990 7182 208 25 8 chr2 22398174 22399577 -230857006 + L1MA2 LINE L1 15 1441 -6124 6814 154 27 9 chr2 22399577 22401260 -230855323 + L1MA2 LINE L1 2505 4219 -3346 * 9896 159 18 14 chr2 22401257 22404191 -230852392 + L1MA2 LINE L1 4776 7723 0 2072 233 102 45 chr2 22404207 22405177 -230851406 + L1MB8 LINE L1 5150 6176 -2 3650 202 42 28 chr2 22405397 22406361 -230850222 - L1MB7 LINE L1 -21 6163 5182 1359 240 11 3 chr2 22406361 22406648 -230849935 - AluJo SINE Alu -23 289 1 3650 202 42 28 chr2 22406648 22407056 -230849527 - L1MB7 LINE L1 -1002 5182 4781 2175 112 0 3 chr2 22407357 22407652 -230848931 + AluSc SINE Alu 1 294 -15 209 270 68 0 chr2 22408855 22408929 -230847654 - MIR SINE MIR -102 160 82 258 323 21 0 chr2 22409870 22409966 -230846617 + MLT1I-int LTR MaLR 1012 1109 -262 1986 142 3 0 chr2 22411071 22411367 -230845216 + AluSx SINE Alu 1 297 -15 288 231 0 0 chr2 22411841 22411919 -230844664 + (TA)n Simple_repeat Simple_repeat 1 78 0 395 257 57 9 chr2 22412255 22412360 -230844223 - MER20 DNA MER1_type -6 213 104 237 132 0 0 chr2 22412387 22412425 -230844158 + (TA)n Simple_repeat Simple_repeat 1 38 0 280 324 27 0 chr2 22412429 22412540 -230844043 + L1MC4 LINE L1 6614 6727 -1315 235 345 36 50 chr2 22412865 22413004 -230843579 + L2 LINE L2 3177 3313 0 2095 119 6 13 chr2 22413096 22413408 -230843175 - AluY SINE Alu -1 310 1 21 36 0 0 chr2 22414401 22414429 -230842154 + AT_rich Low_complexity Low_complexity 1 28 0 268 82 20 20 chr2 22414652 22414701 -230841882 + (GA)n Simple_repeat Simple_repeat 2 50 0 393 287 154 47 chr2 22415190 22415469 -230841114 - L2 LINE L2 0 3313 3005 318 280 16 64 chr2 22415848 22415973 -230840610 + MLT1I LTR MaLR 119 237 -172 2206 125 0 0 chr2 22416118 22416429 -230840154 - AluSx SINE Alu -1 311 1 433 323 213 24 chr2 22417444 22418069 -230838514 + L2 LINE L2 1749 2491 -823 2100 127 3 0 chr2 22418251 22418551 -230838032 - AluSp SINE Alu -12 301 1 324 295 8 78 chr2 22418770 22418899 -230837684 + L2 LINE L2 2934 3053 -219 383 312 41 7 chr2 22419828 22419979 -230836604 - MIR SINE MIR -56 206 52 181 250 0 0 chr2 22420267 22420307 -230836276 - L2 LINE L2 0 3313 3274 28 48 0 0 chr2 22420883 22420925 -230835658 + AT_rich Low_complexity Low_complexity 1 42 0 1723 204 30 16 chr2 22421245 22421617 -230834966 + L1PB4 LINE L1 5751 6127 -29 1086 123 7 0 chr2 22421617 22421771 -230834812 + AluSx SINE Alu 1 155 -157 1549 111 0 40 chr2 22421796 22422022 -230834561 + AluSg SINE Alu 63 279 -31 234 105 0 0 chr2 22422051 22422089 -230834494 + L1PB4 LINE L1 6112 6149 -7 23 54 0 0 chr2 22424119 22424156 -230832427 + AT_rich Low_complexity Low_complexity 1 37 0 438 188 36 0 chr2 22424161 22424326 -230832257 + (TA)n Simple_repeat Simple_repeat 1 171 0 241 242 22 0 chr2 22425640 22425731 -230830852 + CT-rich Low_complexity Low_complexity 3 95 0 21 0 0 0 chr2 22427236 22427257 -230829326 + AT_rich Low_complexity Low_complexity 1 21 0 2223 97 0 0 chr2 22428711 22429000 -230827583 - AluSq SINE Alu -24 289 1 3063 313 70 17 chr2 22429301 22430581 -230826002 + L2 LINE L2 1249 2596 -718 691 276 154 6 chr2 22430581 22431215 -230825368 - L1ME LINE L1 -557 5607 4881 378 319 89 45 chr2 22431637 22431929 -230824654 + L1MB8 LINE L1 5260 5564 -2244 321 333 35 23 chr2 22431985 22432159 -230824424 - MIR SINE MIR -72 190 15 215 333 24 0 chr2 22433421 22433505 -230823078 - MIR SINE MIR -124 138 53 265 333 11 0 chr2 22433687 22433777 -230822806 + GA-rich Low_complexity Low_complexity 6 96 0 301 323 8 8 chr2 22434086 22434216 -230822367 - L1ME LINE L1 -469 5652 5523 351 0 0 0 chr2 22434225 22434264 -230822319 + (TA)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr2 22434362 22434390 -230822193 + AT_rich Low_complexity Low_complexity 1 28 0 23 78 0 0 chr2 22434488 22434539 -230822044 + AT_rich Low_complexity Low_complexity 1 51 0 253 245 116 19 chr2 22434540 22434695 -230821888 - MER69 DNA AcHobo -167 2359 2190 813 221 11 16 chr2 22434762 22434952 -230821631 + L1MB8 LINE L1 5988 6176 -2 2232 105 0 3 chr2 22434965 22435271 -230821312 + AluSx SINE Alu 1 305 -7 529 233 63 11 chr2 22435281 22435470 -230821113 - MER69 DNA AcHobo -327 2199 2001 415 304 15 0 chr2 22435517 22435652 -230820931 - MER69 DNA AcHobo -1899 627 491 4683 177 40 20 chr2 22435680 22435729 -230820854 - L1MA8 LINE L1 -10 6281 6234 1591 213 18 6 chr2 22435729 22436067 -230820516 + MER2 DNA MER2_type 1 342 -2 4683 177 40 20 chr2 22436067 22437185 -230819398 - L1MA8 LINE L1 -57 6234 5088 604 184 86 0 chr2 22437221 22437343 -230819240 - L1MA8 LINE L1 -1616 4530 4391 390 21 0 0 chr2 22437343 22437390 -230819193 + (TG)n Simple_repeat Simple_repeat 2 48 0 604 184 86 0 chr2 22437390 22437419 -230819164 - L1MA8 LINE L1 -1755 4391 4366 2694 177 29 89 chr2 22437423 22438123 -230818460 - L1 LINE L1 -1065 5263 4606 3380 177 75 18 chr2 22438196 22439083 -230817500 - L1 LINE L1 -2400 3928 2991 1243 166 136 58 chr2 22439110 22439588 -230816995 - MER4A LTR ERV1 -19 446 1 1035 229 12 8 chr2 22439588 22439832 -230816751 - L1 LINE L1 -3342 2986 2742 * 1784 262 35 12 chr2 22439826 22440401 -230816182 - L1 LINE L1 -4604 1724 1133 3982 165 31 3 chr2 22440401 22441115 -230815468 - MER50 LTR ERV1 0 734 1 1784 262 35 12 chr2 22441115 22441131 -230815452 - L1 LINE L1 -5195 1133 1119 2346 130 23 8 chr2 22441131 22441484 -230815099 - MER50-int LTR ERV1 -24 7181 6824 604 137 0 21 chr2 22441469 22441564 -230815019 - MER50-int LTR ERV1 -1010 6195 6103 * 3096 128 51 12 chr2 22441565 22442115 -230814468 - MER50-int LTR ERV1 -812 4068 3391 2893 155 6 12 chr2 22442115 22442599 -230813984 - MER50-int LTR ERV1 -3398 1482 1002 5843 149 53 12 chr2 22442617 22444320 -230812263 - MER50-int LTR ERV1 -5351 1854 1 3916 151 29 19 chr2 22444369 22445066 -230811517 - MER50 LTR ERV1 -30 704 1 606 229 23 0 chr2 22445102 22445293 -230811290 - L1 LINE L1 -4240 1088 939 235 97 90 15 chr2 22445297 22445431 -230811152 + (TA)n Simple_repeat Simple_repeat 1 144 0 809 299 119 43 chr2 22445547 22446322 -230810261 + L1ME2 LINE L1 1177 2085 -4311 1494 207 29 0 chr2 22446322 22446597 -230809986 + AluJo SINE Alu 3 285 -27 809 299 119 43 chr2 22446597 22447073 -230809510 + L1ME2 LINE L1 2085 2523 -3873 765 280 89 51 chr2 22447096 22447401 -230809182 + L1ME2 LINE L1 2543 2835 -3380 2304 85 3 7 chr2 22447401 22447708 -230808875 - AluY SINE Alu -5 306 1 765 280 89 51 chr2 22447708 22447995 -230808588 + L1ME2 LINE L1 2835 3158 -3057 216 0 0 0 chr2 22448260 22448284 -230808299 + (TA)n Simple_repeat Simple_repeat 2 25 0 2330 70 20 3 chr2 22448284 22448586 -230807997 - AluSp SINE Alu -6 307 1 1045 279 66 51 chr2 22448717 22449365 -230807218 + L1ME2 LINE L1 3622 4279 -1936 261 289 61 87 chr2 22449370 22449722 -230806861 + L1ME2 LINE L1 4881 5220 -995 1992 136 3 10 chr2 22449722 22450023 -230806560 + AluSp SINE Alu 4 302 -11 261 289 61 87 chr2 22450023 22450131 -230806452 + L1ME2 LINE L1 5220 5329 -886 887 244 31 4 chr2 22450218 22450472 -230806111 + L1ME2 LINE L1 5359 5619 -614 431 223 39 0 chr2 22450544 22450647 -230805936 + L1ME2 LINE L1 5811 5917 -318 557 222 81 9 chr2 22450649 22450870 -230805713 - L1M4 LINE L1 -777 5369 5133 918 254 30 27 chr2 22450895 22451194 -230805389 + L1ME2 LINE L1 5925 6224 -9 2504 181 33 6 chr2 22451397 22451879 -230804704 + Tigger2 DNA MER2_type 1 495 -2223 3824 170 48 19 chr2 22451881 22452716 -230803867 - L1M4 LINE L1 -1156 4990 4132 231 373 37 15 chr2 22452764 22452898 -230803685 - MIR3 SINE MIR -28 180 44 * 1444 263 46 151 chr2 22452896 22453341 -230803242 - L2 LINE L2 -502 2812 2400 403 188 134 0 chr2 22453341 22453453 -230803130 - L1M4 LINE L1 -685 5499 5373 1444 263 46 151 chr2 22453453 22453869 -230802714 - L2 LINE L2 -914 2400 1942 28 0 0 0 chr2 22454111 22454139 -230802444 + AT_rich Low_complexity Low_complexity 1 28 0 3337 228 62 27 chr2 22454230 22456005 -230800578 - L1MB7 LINE L1 -21 6163 4322 303 28 0 0 chr2 22456762 22456798 -230799785 + (TG)n Simple_repeat Simple_repeat 1 36 0 207 309 37 8 chr2 22457811 22457971 -230798612 - MIR SINE MIR -46 216 31 2203 115 0 7 chr2 22458506 22458811 -230797772 - AluSg SINE Alu -7 303 1 1812 248 82 7 chr2 22458826 22459453 -230797130 + L1MB4 LINE L1 4836 5414 -766 195 100 0 0 chr2 22459453 22459483 -230797100 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1812 248 82 7 chr2 22459483 22460094 -230796489 + L1MB4 LINE L1 5414 6178 -2 22 35 0 0 chr2 22460768 22460797 -230795786 + AT_rich Low_complexity Low_complexity 1 29 0 1339 92 0 66 chr2 22461386 22461614 -230794969 + AluY SINE Alu 99 311 0 201 74 0 0 chr2 22461654 22461681 -230794902 + (TTCC)n Simple_repeat Simple_repeat 4 30 0 855 131 0 0 chr2 22461744 22461881 -230794702 + (TCCC)n Simple_repeat Simple_repeat 3 139 0 222 118 0 0 chr2 22461944 22461978 -230794605 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1690 278 112 3 chr2 22462076 22462824 -230793759 - L1MB7 LINE L1 -1985 4161 3332 3326 253 66 9 chr2 22462831 22463448 -230793135 - L1MC3 LINE L1 -7 7778 7081 2114 142 31 19 chr2 22463448 22463808 -230792775 + THE1B LTR MaLR 1 364 0 3326 253 66 9 chr2 22463808 22464185 -230792398 - L1MC3 LINE L1 -704 7081 6727 675 301 69 19 chr2 22464223 22464642 -230791941 - L1MEc LINE L1 -4258 2138 1699 1446 214 55 16 chr2 22464683 22465047 -230791536 - L1M4 LINE L1 -540 5703 5326 21 0 0 0 chr2 22465075 22465096 -230791487 + AT_rich Low_complexity Low_complexity 1 21 0 1768 295 67 40 chr2 22465099 22466612 -230789971 - L1MEc LINE L1 -4814 1401 45 2002 140 44 16 chr2 22466614 22466979 -230789604 - THE1C LTR MaLR 0 375 1 1812 177 51 24 chr2 22467113 22467596 -230788987 + MLT2A2 LTR ERVL 1 500 -54 248 207 98 0 chr2 22467674 22467756 -230788827 + L1MC4 LINE L1 6614 6703 -1339 198 209 0 0 chr2 22467761 22467804 -230788779 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 229 250 71 0 chr2 22467804 22467888 -230788695 + L1MC4 LINE L1 6614 6703 -1339 788 212 8 8 chr2 22467888 22468143 -230788440 + (TATATG)n Simple_repeat Simple_repeat 1 255 0 235 247 26 0 chr2 22468143 22468220 -230788363 + L1MCa LINE L1 2006 2084 -4342 182 0 105 0 chr2 22468256 22468294 -230788289 + (TA)n Simple_repeat Simple_repeat 1 42 0 1015 258 106 58 chr2 22468301 22468931 -230787652 - L1ME LINE L1 -439 5723 5071 1690 228 24 40 chr2 22468956 22469389 -230787194 - MLT2B2 LTR ERVL 0 397 1 1128 285 136 36 chr2 22469412 22469512 -230787071 - L1ME LINE L1 -1156 4990 4901 2347 73 0 55 chr2 22469512 22469839 -230786744 - AluSc SINE Alu 0 309 1 1128 285 136 36 chr2 22469839 22470758 -230785825 - L1ME LINE L1 -1245 4901 3869 21 0 0 0 chr2 22470886 22470907 -230785676 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr2 22471491 22471514 -230785069 + AT_rich Low_complexity Low_complexity 1 23 0 2039 170 62 79 chr2 22471986 22472533 -230784050 - L1MA10 LINE L1 -8 6326 5789 3095 104 143 138 chr2 22473271 22474565 -230782018 + pTR5 LTR ERV1 827 2438 0 499 203 262 0 chr2 22476087 22476154 -230780429 - MER46A DNA MER2_type -2495 236 188 1585 151 12 12 chr2 22476154 22476412 -230780171 + AluSx SINE Alu 44 301 -11 499 203 262 0 chr2 22476412 22476531 -230780052 - MER46A DNA MER2_type -2543 188 1 23 33 0 0 chr2 22477573 22477603 -230778980 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr2 22477788 22477811 -230778772 + AT_rich Low_complexity Low_complexity 1 23 0 1973 128 67 20 chr2 22478998 22479356 -230777227 + THE1C LTR MaLR 1 375 0 264 391 106 21 chr2 22479526 22480245 -230776338 + L2 LINE L2 854 1633 -1681 297 291 44 50 chr2 22480640 22480822 -230775761 + L2 LINE L2 1978 2158 -1156 637 209 6 55 chr2 22482010 22482146 -230774437 - AluJo/FRAM SINE Alu -18 294 166 2033 70 4 33 chr2 22482146 22482417 -230774166 + AluY SINE Alu 34 296 -15 637 209 6 55 chr2 22482417 22482443 -230774140 - AluJo/FRAM SINE Alu -146 166 140 278 180 16 0 chr2 22482458 22482519 -230774064 + (TA)n Simple_repeat Simple_repeat 2 63 0 297 0 0 0 chr2 22482522 22482555 -230774028 + (CA)n Simple_repeat Simple_repeat 2 34 0 399 326 49 33 chr2 22483167 22483351 -230773232 + L3 LINE CR1 922 1108 -469 27 29 0 0 chr2 22483837 22483871 -230772712 + AT_rich Low_complexity Low_complexity 1 34 0 291 175 0 0 chr2 22484151 22484208 -230772375 + (TATG)n Simple_repeat Simple_repeat 3 59 0 26 30 0 0 chr2 22484614 22484647 -230771936 + AT_rich Low_complexity Low_complexity 1 33 0 22 80 0 0 chr2 22485124 22485174 -230771409 + AT_rich Low_complexity Low_complexity 1 50 0 243 0 0 0 chr2 22486814 22486841 -230769742 + (TC)n Simple_repeat Simple_repeat 2 28 0 345 47 0 0 chr2 22486855 22486898 -230769685 + (GA)n Simple_repeat Simple_repeat 1 43 0 336 24 0 0 chr2 22487767 22487808 -230768775 + (CA)n Simple_repeat Simple_repeat 1 41 0 614 385 64 19 chr2 22488282 22488765 -230767818 + L3 LINE CR1 1071 1575 -2 22 35 0 0 chr2 22488847 22488876 -230767707 + AT_rich Low_complexity Low_complexity 1 29 0 745 296 39 35 chr2 22489094 22489405 -230767178 + ERVL LTR ERVL 1101 1412 -3584 333 250 0 38 chr2 22489645 22489725 -230766858 + ERVL LTR ERVL 1756 1832 -3164 471 204 102 12 chr2 22489745 22489912 -230766671 + MER53 DNA DNA 8 189 0 524 338 75 24 chr2 22489915 22490208 -230766375 + ERVL LTR ERVL 1968 2275 -2721 2017 266 64 26 chr2 22490209 22491001 -230765582 + L1MB5 LINE L1 4017 4838 -1308 1754 185 37 87 chr2 22491001 22491096 -230765487 + MLT1C LTR MaLR 1 99 -368 1819 181 44 16 chr2 22491096 22491461 -230765122 - THE1C LTR MaLR 0 375 1 1754 185 37 87 chr2 22491461 22491857 -230764726 + MLT1C LTR MaLR 99 467 0 3605 217 80 3 chr2 22491857 22493078 -230763505 + L1MB5 LINE L1 4834 6157 -17 24 53 0 0 chr2 22493081 22493119 -230763464 + AT_rich Low_complexity Low_complexity 1 38 0 2248 329 19 8 chr2 22493119 22493981 -230762602 + ERVL LTR ERVL 2285 3020 -1976 744 324 42 43 chr2 22493990 22494607 -230761976 + ERVL LTR ERVL 3131 3535 -1461 675 336 59 23 chr2 22494746 22495140 -230761443 + ERVL LTR ERVL 4039 4481 -1283 500 315 14 18 chr2 22495251 22495470 -230761113 + ERVL LTR ERVL 4665 4882 -603 683 333 35 31 chr2 22495611 22496067 -230760516 + ERVL LTR ERVL 4887 5344 -310 359 325 73 7 chr2 22496187 22496338 -230760245 + LTR16B LTR ERVL 1 161 -303 247 333 75 0 chr2 22496580 22496673 -230759910 + L1M4 LINE L1 5486 5585 -579 226 301 115 6 chr2 22497603 22497759 -230758824 + L1M4 LINE L1 5690 5862 -316 310 128 0 0 chr2 22497806 22497853 -230758730 - MADE1 DNA Mariner 0 80 34 4949 171 38 10 chr2 22498051 22499058 -230757525 - L1MA8 LINE L1 -17 6274 5231 628 226 75 44 chr2 22499059 22499218 -230757365 + FRAM SINE Alu 1 164 -12 5133 191 36 25 chr2 22499218 22500048 -230756535 - L1MA8 LINE L1 -909 5237 4388 189 0 0 0 chr2 22500048 22500069 -230756514 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 5133 191 36 25 chr2 22500069 22500446 -230756137 - L1MA8 LINE L1 -1758 4388 4017 1964 123 67 58 chr2 22500446 22500876 -230755707 + L1MA4 LINE L1 5866 6299 -1 1360 206 88 31 chr2 22500876 22501352 -230755231 + L1 LINE L1 3041 3543 -2603 1535 147 16 0 chr2 22551352 22551604 -230704979 + MER44D DNA MER2_type 294 604 -1 22 80 0 0 chr2 22551706 22551756 -230704827 + AT_rich Low_complexity Low_complexity 1 50 0 681 253 91 97 chr2 22551763 22552281 -230704302 + MLT1H LTR MaLR 8 522 -27 210 238 60 24 chr2 22552348 22552432 -230704151 - MIR SINE MIR -56 206 120 443 307 26 40 chr2 22552662 22552782 -230703801 - MER102b DNA MER1_type -1090 338 221 2384 94 3 0 chr2 22552782 22553091 -230703492 + AluSp SINE Alu 3 312 -1 443 307 26 40 chr2 22553091 22553198 -230703385 - MER102b DNA MER1_type -1207 221 114 825 161 7 0 chr2 22553326 22553463 -230703120 + FLAM_C SINE Alu 1 138 -5 2143 131 3 0 chr2 22555224 22555529 -230701054 + AluSg SINE Alu 1 306 -4 213 175 0 0 chr2 22555896 22555936 -230700647 + (TG)n Simple_repeat Simple_repeat 1 40 0 246 136 121 0 chr2 22556670 22556736 -230699847 - L1MA7 LINE L1 -2 6289 6216 591 218 8 8 chr2 22556951 22557075 -230699508 - L2 LINE L2 0 3313 3190 1424 204 33 41 chr2 22557203 22557571 -230699012 + MLT1A1 LTR MaLR 1 365 0 258 323 123 13 chr2 22557680 22557835 -230698748 + MIR SINE MIR 50 221 -41 466 248 99 8 chr2 22558212 22558333 -230698250 + L2 LINE L2 3137 3268 -4 2141 147 0 0 chr2 22558570 22558882 -230697701 - AluSx SINE Alu 0 312 1 256 312 0 65 chr2 22559865 22559958 -230696625 - L2 LINE L2 -2 3311 3225 363 44 0 0 chr2 22560154 22560199 -230696384 + (TG)n Simple_repeat Simple_repeat 1 45 0 294 106 0 0 chr2 22560199 22560246 -230696337 + (GA)n Simple_repeat Simple_repeat 2 48 0 257 271 29 0 chr2 22560802 22560872 -230695711 + L1ME3 LINE L1 6062 6133 -29 2038 140 0 0 chr2 22561736 22562022 -230694561 + AluSx SINE Alu 3 288 -24 396 179 0 0 chr2 22562817 22562895 -230693688 + (TA)n Simple_repeat Simple_repeat 1 78 0 1719 248 68 7 chr2 22563196 22563652 -230692931 + MER119 DNA MER1_type 1 484 -99 381 324 45 80 chr2 22564699 22565076 -230691507 + L2 LINE L2 2127 2490 -824 270 365 78 9 chr2 22566301 22566416 -230690167 + L2 LINE L2 3129 3251 -21 26 64 0 0 chr2 22566952 22566999 -230689584 + AT_rich Low_complexity Low_complexity 1 47 0 458 310 32 7 chr2 22567497 22567652 -230688931 - MIR SINE MIR -54 208 50 26 30 0 0 chr2 22570054 22570087 -230686496 + AT_rich Low_complexity Low_complexity 1 33 0 2514 71 3 0 chr2 22570481 22570791 -230685792 + AluY SINE Alu 1 311 0 21 36 0 0 chr2 22572212 22572240 -230684343 + AT_rich Low_complexity Low_complexity 1 28 0 580 235 37 27 chr2 22574075 22574370 -230682213 + MLT1I LTR MaLR 79 392 -17 279 212 0 0 chr2 22575453 22575519 -230681064 - MER116 DNA Mariner -9 71 6 252 0 0 0 chr2 22575804 22575832 -230680751 + (A)n Simple_repeat Simple_repeat 1 28 0 869 183 52 92 chr2 22576182 22576411 -230680172 + Tigger5 DNA MER2_type 1 220 -2103 * 1729 138 4 0 chr2 22576403 22576671 -230679912 + Tigger5 DNA MER2_type 2054 2322 -1 445 321 144 23 chr2 22577785 22578221 -230678362 - L1MEd LINE L1 -2563 3566 3078 361 245 172 81 chr2 22578222 22578483 -230678100 + MLT1E2 LTR MaLR 1 285 -341 581 286 104 58 chr2 22578825 22579413 -230677170 - L1MEd LINE L1 -5041 1078 464 2228 114 0 16 chr2 22579762 22580070 -230676513 - AluSg SINE Alu -7 303 1 458 317 35 15 chr2 22580101 22580300 -230676283 + L2 LINE L2 3111 3313 0 244 298 36 0 chr2 22580306 22580390 -230676193 + (CATA)n Simple_repeat Simple_repeat 2 88 0 286 284 162 27 chr2 22580969 22581117 -230675466 + MIR3 SINE MIR 31 198 -10 471 259 6 29 chr2 22581697 22581867 -230674716 + L1M4 LINE L1 3272 3437 -2709 201 369 36 18 chr2 22582471 22582582 -230674001 + MIR SINE MIR 4 116 -146 234 81 0 0 chr2 22582641 22582678 -230673905 + (TA)n Simple_repeat Simple_repeat 2 38 0 1198 164 38 0 chr2 22583395 22583608 -230672975 + Tigger2 DNA MER2_type 2498 2718 0 1331 245 33 27 chr2 22583656 22584024 -230672559 + MLT1A2 LTR MaLR 5 374 0 184 77 51 0 chr2 22587226 22587265 -230669318 + A-rich Low_complexity Low_complexity 2 42 0 375 202 25 17 chr2 22590366 22590485 -230666098 + GA-rich Low_complexity Low_complexity 4 123 0 459 290 36 24 chr2 22590700 22590948 -230665635 - L1MEd LINE L1 -4923 1196 946 4346 148 73 14 chr2 22590976 22591758 -230664825 - L1PA16 LINE L1 0 6166 5339 2080 115 7 0 chr2 22591758 22592053 -230664530 + AluSc SINE Alu 1 297 -12 427 91 39 0 chr2 22592053 22592130 -230664453 + GA-rich Low_complexity Low_complexity 4 83 0 537 129 63 12 chr2 22592141 22592276 -230664307 - L1 LINE L1 -795 5351 5211 1737 181 122 13 chr2 22592381 22592767 -230663816 + MSTA LTR MaLR 1 428 0 2448 71 0 0 chr2 22592990 22593286 -230663297 + AluY SINE Alu 1 296 -15 234 286 29 9 chr2 22594064 22594169 -230662414 - L1MCa LINE L1 -4581 1845 1739 2446 118 39 15 chr2 22594444 22594833 -230661750 - MER48 LTR ERV1 0 398 1 480 292 52 77 chr2 22594910 22595406 -230661177 - L1MCa LINE L1 -5013 1403 920 256 273 99 37 chr2 22595712 22595873 -230660710 - L1MCa LINE L1 -5890 526 356 23 0 0 0 chr2 22596511 22596534 -230660049 + AT_rich Low_complexity Low_complexity 1 23 0 756 251 18 44 chr2 22597157 22597384 -230659199 + MER58A DNA MER1_type 3 223 -1 1011 287 77 8 chr2 22597506 22597868 -230658715 + MLT1I LTR MaLR 1 387 -22 586 301 113 10 chr2 22598547 22599062 -230657521 + L1ME4a LINE L1 5526 6093 -28 204 283 35 9 chr2 22599136 22599249 -230657334 + (TA)n Simple_repeat Simple_repeat 2 117 0 5317 114 2 14 chr2 22599378 22600175 -230656408 - L1PA15 LINE L1 -9 6156 5369 27 96 0 0 chr2 22600341 22600424 -230656159 + AT_rich Low_complexity Low_complexity 1 83 0 1133 211 13 50 chr2 22600425 22600728 -230655855 - L1MA10 LINE L1 -13 6321 6030 186 300 0 0 chr2 22600729 22600779 -230655804 + L2 LINE L2 2709 2758 -556 469 236 0 9 chr2 22600974 22601080 -230655503 - L1PB4 LINE L1 -26 6130 6026 314 292 70 16 chr2 22601739 22601924 -230654659 - L1ME LINE L1 -321 5800 5606 236 189 75 0 chr2 22602448 22602501 -230654082 - MER68 LTR ERV1 -31 531 475 25 31 0 0 chr2 22603237 22603269 -230653314 + AT_rich Low_complexity Low_complexity 1 32 0 32 26 0 0 chr2 22603814 22603853 -230652730 + AT_rich Low_complexity Low_complexity 1 39 0 697 243 88 4 chr2 22603932 22604158 -230652425 - LTR37B LTR ERV1 0 468 224 1963 114 57 4 chr2 22604389 22604670 -230651913 + AluSx SINE Alu 1 296 -16 225 274 0 20 chr2 22604900 22604951 -230651632 - L2 LINE L2 -6 3266 3217 1954 135 4 0 chr2 22606017 22606298 -230650285 + AluSx SINE Alu 14 295 -17 180 348 128 68 chr2 22606814 22607064 -230649519 - L2 LINE L2 -82 3190 2926 3537 175 46 23 chr2 22608120 22609121 -230647462 - L1MA7 LINE L1 -258 6033 5013 802 268 49 25 chr2 22609135 22609378 -230647205 - MIR SINE MIR -8 254 6 7025 61 27 0 chr2 22609593 22610621 -230645962 - L1PA8 LINE L1 -1 6171 5139 233 377 23 23 chr2 22610662 22610792 -230645791 - MIR SINE MIR -126 136 7 627 354 93 42 chr2 22612129 22612982 -230643601 - L2 LINE L2 -457 2857 1962 338 204 11 0 chr2 22613079 22613172 -230643411 + GA-rich Low_complexity Low_complexity 6 99 0 3397 195 43 65 chr2 22614179 22615089 -230641494 - L1MC1 LINE L1 0 7764 6137 26 50 0 0 chr2 22615196 22615236 -230641347 + AT_rich Low_complexity Low_complexity 1 40 0 1431 36 6 10 chr2 22615344 22615593 -230640990 + L1PA3 LINE L1 5955 6176 0 704 344 126 44 chr2 22615829 22616819 -230639764 + L1ME LINE L1 3 1073 -5046 927 265 57 43 chr2 22616898 22617522 -230639061 + L1ME3A LINE L1 5144 5777 -393 399 274 22 34 chr2 22617549 22617728 -230638855 + L1ME3A LINE L1 5851 6028 -135 478 309 91 17 chr2 22617744 22618094 -230638489 + L1ME LINE L1 4357 4732 -1397 229 263 124 21 chr2 22618201 22618395 -230638188 + L1ME LINE L1 4911 5124 -1005 575 272 138 19 chr2 22618655 22618975 -230637608 + L1ME LINE L1 5419 5776 -369 279 0 0 0 chr2 22621695 22621726 -230634857 + (CA)n Simple_repeat Simple_repeat 2 32 0 33 73 0 0 chr2 22621726 22621794 -230634789 + AT_rich Low_complexity Low_complexity 1 68 0 198 0 0 0 chr2 22621800 22621822 -230634761 + (TA)n Simple_repeat Simple_repeat 1 22 0 194 328 40 80 chr2 22621854 22621979 -230634604 - MER5A DNA MER1_type -68 121 2 420 394 20 5 chr2 22622125 22622328 -230634255 + MIR SINE MIR 2 207 -55 24 53 0 0 chr2 22623027 22623065 -230633518 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 22623473 22623496 -230633087 + AT_rich Low_complexity Low_complexity 1 23 0 1925 108 0 0 chr2 22624560 22624811 -230631772 + AluSq SINE Alu 1 251 -62 455 316 88 10 chr2 22625039 22625232 -230631351 + MIR SINE MIR 31 238 -24 193 215 13 13 chr2 22625364 22625443 -230631140 + (TTTA)n Simple_repeat Simple_repeat 4 82 0 282 136 0 0 chr2 22625537 22625581 -230631002 + L2 LINE L2 3269 3312 -1 183 42 0 0 chr2 22625975 22625999 -230630584 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1373 144 74 41 chr2 22626002 22626272 -230630311 - AluJb SINE Alu -33 279 1 31 0 0 0 chr2 22626717 22626748 -230629835 + AT_rich Low_complexity Low_complexity 1 31 0 950 128 156 0 chr2 22626748 22626928 -230629655 - L1MA2 LINE L1 -2 6302 6095 2325 91 0 0 chr2 22627138 22627425 -230629158 + AluSg SINE Alu 1 287 -23 243 0 0 0 chr2 22627426 22627453 -230629130 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 617 338 123 41 chr2 22627476 22627686 -230628897 + L2 LINE L2 2134 2325 -989 2155 136 0 0 chr2 22627686 22627996 -230628587 + AluSx SINE Alu 1 310 -2 617 338 123 41 chr2 22627996 22628475 -230628108 + L2 LINE L2 2325 2880 -434 1230 289 73 24 chr2 22628599 22629233 -230627350 - HAL1 LINE L1 -162 2345 1681 1995 235 21 14 chr2 22629267 22629778 -230626805 - MER90 LTR ERV1 -99 515 1 648 287 116 68 chr2 22629785 22630894 -230625689 - HAL1 LINE L1 -1245 1262 101 212 330 134 50 chr2 22631001 22631103 -230625480 + L3 LINE CR1 238 330 -1247 2178 111 0 26 chr2 22631103 22631410 -230625173 + AluSq SINE Alu 1 299 -14 2168 98 0 29 chr2 22631410 22631716 -230624867 + AluY SINE Alu 1 297 -14 212 330 134 50 chr2 22631716 22631851 -230624732 + L3 LINE CR1 329 496 -1081 360 315 123 19 chr2 22631858 22632020 -230624563 + MIR SINE MIR 12 190 -72 745 161 8 0 chr2 22632196 22632314 -230624269 + 5S rRNA rRNA 1 119 -2 2866 22 0 0 chr2 22633362 22633678 -230622905 - AluYb8 SINE Alu -2 316 1 191 323 0 48 chr2 22636276 22636338 -230620245 - L2 LINE L2 -63 3209 3151 330 376 24 37 chr2 22636375 22636653 -230619930 + L2 LINE L2 2728 3010 -262 581 266 305 25 chr2 22636830 22637278 -230619305 + MLT1H LTR MaLR 20 557 -10 514 255 127 45 chr2 22638500 22638564 -230618019 - MLT1H LTR MaLR -1 548 491 1751 166 26 10 chr2 22638564 22638871 -230617712 + AluJb SINE Alu 1 312 0 514 255 127 45 chr2 22638871 22639039 -230617544 - MLT1H LTR MaLR -58 491 320 2044 136 0 16 chr2 22639279 22639587 -230616996 - AluSx SINE Alu 0 312 10 218 345 191 0 chr2 22639801 22639911 -230616672 - MIR SINE MIR -128 134 4 539 228 53 23 chr2 22639986 22640157 -230616426 + MER104 DNA MER2_type 4 179 -1 1957 153 22 30 chr2 22641085 22641452 -230615131 + THE1B LTR MaLR 1 364 0 11595 97 4 11 chr2 22641452 22641961 -230614622 + THE1B-int LTR MaLR 1 512 -1068 2304 116 0 0 chr2 22641961 22642272 -230614311 + AluY SINE Alu 1 311 0 11595 97 4 11 chr2 22642272 22643353 -230613230 + THE1B-int LTR MaLR 512 1580 0 1958 150 19 46 chr2 22643353 22643726 -230612857 + THE1B LTR MaLR 1 363 -1 1244 96 0 0 chr2 22644672 22644838 -230611745 + AluSg/x SINE Alu 142 307 -3 255 303 35 27 chr2 22644851 22644974 -230611609 - MER5A DNA MER1_type -52 137 4 188 359 0 0 chr2 22645074 22645127 -230611456 + L2 LINE L2 3219 3271 -1 276 273 67 53 chr2 22646453 22646603 -230609980 - L2 LINE L2 -124 3189 3038 189 235 0 0 chr2 22646707 22646741 -230609842 - L2 LINE L2 -83 3189 3156 350 351 28 83 chr2 22647091 22647416 -230609167 - L2 LINE L2 0 3272 2966 317 250 54 11 chr2 22647807 22647899 -230608684 - MIR SINE MIR -128 134 39 347 344 31 12 chr2 22649553 22649713 -230606870 + MIR SINE MIR 28 190 -72 234 305 9 48 chr2 22650141 22650246 -230606337 + MIR SINE MIR 103 203 -59 358 353 74 7 chr2 22651011 22651239 -230605344 + MIR SINE MIR 21 262 0 248 0 0 30 chr2 22651244 22651277 -230605306 + (TTA)n Simple_repeat Simple_repeat 1 32 0 459 92 0 0 chr2 22651355 22651420 -230605163 + (CA)n Simple_repeat Simple_repeat 1 65 0 294 255 0 53 chr2 22651739 22651833 -230604750 + LTR33A LTR ERVL 412 500 -23 21 57 0 0 chr2 22652215 22652250 -230604333 + AT_rich Low_complexity Low_complexity 1 35 0 1992 136 3 6 chr2 22654885 22655202 -230601381 + L1PA15 LINE L1 5847 6162 -3 287 298 10 39 chr2 22655418 22655522 -230601061 + MIR SINE MIR 40 140 -122 1940 170 96 19 chr2 22655523 22655941 -230600642 - MER66A LTR ERV1 0 478 29 1765 185 3 16 chr2 22657612 22657926 -230598657 - AluJo SINE Alu -2 310 1 1691 173 83 25 chr2 22658638 22659036 -230597547 + MER66B LTR ERV1 3 423 -63 188 184 20 0 chr2 22659870 22659919 -230596664 + (TA)n Simple_repeat Simple_repeat 1 50 0 1965 150 7 78 chr2 22660559 22660972 -230595611 + MLT1B LTR MaLR 7 390 0 201 195 0 0 chr2 22662593 22662634 -230593949 + (TA)n Simple_repeat Simple_repeat 2 42 0 324 0 0 0 chr2 22664029 22664065 -230592518 + (A)n Simple_repeat Simple_repeat 1 36 0 1674 277 49 38 chr2 22667038 22667855 -230588728 - L1ME3A LINE L1 -5 6165 5340 442 262 51 33 chr2 22667866 22668141 -230588442 - L1M4 LINE L1 -748 5398 5119 258 224 48 109 chr2 22668291 22668438 -230588145 - MIR SINE MIR -25 237 100 364 264 8 49 chr2 22668835 22669065 -230587518 + GA-rich Low_complexity Low_complexity 1 220 0 345 284 90 15 chr2 22669065 22669199 -230587384 + MIR SINE MIR 63 206 -56 21 36 0 0 chr2 22672624 22672652 -230583931 + AT_rich Low_complexity Low_complexity 1 28 0 194 260 80 0 chr2 22672873 22672923 -230583660 - L2 LINE L2 -1 3312 3259 5696 119 61 88 chr2 22673589 22674827 -230581756 + Tigger3b DNA MER2_type 28 1231 0 1367 219 16 33 chr2 22675462 22675828 -230580755 - MLT1C LTR MaLR -52 415 56 222 299 11 58 chr2 22676577 22676664 -230579919 + MIR SINE MIR 33 115 -93 187 237 65 86 chr2 22676996 22677089 -230579494 - L2 LINE L2 -9 3304 3214 438 335 66 0 chr2 22678485 22678637 -230577946 - L2 LINE L2 0 3272 3111 235 319 104 42 chr2 22678685 22678945 -230577638 + L2 LINE L2 1807 2082 -1232 1837 190 19 27 chr2 22680168 22680536 -230576047 + MLT1A1 LTR MaLR 1 365 0 265 211 29 115 chr2 22680597 22680701 -230575882 - MLT1H LTR MaLR 0 549 455 387 0 0 0 chr2 22681515 22681558 -230575025 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 297 0 0 0 chr2 22681560 22681593 -230574990 + (TG)n Simple_repeat Simple_repeat 2 34 0 275 208 0 0 chr2 22683279 22683327 -230573256 - L2 LINE L2 -4 3309 3262 233 130 43 0 chr2 22683818 22683864 -230572719 + CT-rich Low_complexity Low_complexity 3 50 0 2628 234 71 23 chr2 22685440 22686148 -230570435 - MER21B LTR ERV1 -105 758 17 1846 85 19 4 chr2 22686332 22686590 -230569993 + L1PA14 LINE L1 5900 6161 0 * 10354 32 1 10 chr2 22686588 22688608 -230567975 + L1PA4 LINE L1 4143 6155 0 1789 142 92 19 chr2 22688611 22688971 -230567612 + LTR49 LTR ERV1 134 519 -76 21 0 0 0 chr2 22689278 22689299 -230567284 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 22689396 22689421 -230567162 + AT_rich Low_complexity Low_complexity 1 25 0 8384 215 24 8 chr2 22689579 22691706 -230564877 - L1 LINE L1 -841 5305 3143 362 329 57 35 chr2 22692481 22692709 -230563874 - L1M4 LINE L1 -1283 4863 4631 39 0 0 0 chr2 22692714 22692753 -230563830 + AT_rich Low_complexity Low_complexity 1 39 0 252 337 84 32 chr2 22694742 22694932 -230561651 - L2 LINE L2 -113 3200 3001 189 0 0 0 chr2 22694950 22694971 -230561612 + (GGGGA)n Simple_repeat Simple_repeat 1 21 0 3266 95 12 12 chr2 22695206 22695688 -230560895 + L1PB1 LINE L1 5663 6144 -7 24 53 0 0 chr2 22696445 22696483 -230560100 + AT_rich Low_complexity Low_complexity 1 38 0 1596 295 86 69 chr2 22696592 22698064 -230558519 - L2 LINE L2 0 3313 1815 25 0 0 0 chr2 22698256 22698281 -230558302 + AT_rich Low_complexity Low_complexity 1 25 0 206 237 13 0 chr2 22698301 22698377 -230558206 + (TA)n Simple_repeat Simple_repeat 2 78 0 2276 107 7 0 chr2 22698430 22698740 -230557843 + AluSq SINE Alu 1 312 -1 799 294 37 47 chr2 22698976 22699567 -230557016 - L1ME3 LINE L1 -279 5883 5299 386 278 0 10 chr2 22701265 22701362 -230555221 - MIR SINE MIR -21 241 146 801 335 97 5 chr2 22701376 22701809 -230554774 + LTR33 LTR ERVL 38 510 -11 529 294 15 0 chr2 22701815 22701951 -230554632 - MIR SINE MIR -124 138 1 892 186 101 36 chr2 22704428 22704649 -230551934 + MER33 DNA MER1_type 5 245 -2340 2110 137 3 0 chr2 22704649 22704949 -230551634 - AluSx SINE Alu -11 301 1 892 186 101 36 chr2 22704949 22704974 -230551609 + MER33 DNA MER1_type 245 267 -57 186 307 51 73 chr2 22705780 22705917 -230550666 + L2 LINE L2 2546 2679 -635 419 371 84 23 chr2 22706397 22706836 -230549747 + L2 LINE L2 2511 2976 -338 321 26 0 0 chr2 22710527 22710565 -230546018 + (TA)n Simple_repeat Simple_repeat 2 39 0 2283 113 0 13 chr2 22710565 22710876 -230545707 - AluSg SINE Alu -3 307 1 458 298 13 20 chr2 22711041 22711192 -230545391 + MIR SINE MIR 95 244 -18 1636 122 24 32 chr2 22713155 22713402 -230543181 + AluSc SINE Alu 1 245 -64 236 173 0 0 chr2 22713522 22713574 -230543009 - L1MC4 LINE L1 -1339 6703 6652 197 206 294 11 chr2 22713831 22713923 -230542660 + MER5A DNA MER1_type 40 157 -32 * 358 148 34 45 chr2 22713857 22713945 -230542638 - MER5A DNA MER1_type -77 112 26 181 309 25 49 chr2 22714098 22714179 -230542404 + L2 LINE L2 2586 2664 -650 180 152 0 0 chr2 22714188 22714221 -230542362 + (TTA)n Simple_repeat Simple_repeat 2 34 0 258 250 0 0 chr2 22714223 22714279 -230542304 - MIR SINE MIR -27 235 180 241 333 19 9 chr2 22714854 22714962 -230541621 + MER110 LTR ERV1 298 406 -85 2257 218 43 34 chr2 22714962 22715134 -230541449 + L1MA9 LINE L1 5612 5781 -531 347 0 23 0 chr2 22715134 22715177 -230541406 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 2257 218 43 34 chr2 22715177 22715661 -230540922 + L1MA9 LINE L1 5781 6274 -38 385 240 21 10 chr2 22715777 22715873 -230540710 + MER110 LTR ERV1 393 489 -2 207 167 0 0 chr2 22715986 22716022 -230540561 + GA-rich Low_complexity Low_complexity 1 36 0 204 350 86 8 chr2 22717016 22717133 -230539450 + L2 LINE L2 3146 3271 -1 22 35 0 0 chr2 22717399 22717428 -230539155 + AT_rich Low_complexity Low_complexity 1 29 0 195 188 0 0 chr2 22718042 22718090 -230538493 + (TATG)n Simple_repeat Simple_repeat 2 49 0 180 111 0 0 chr2 22718101 22718128 -230538455 + (TA)n Simple_repeat Simple_repeat 1 27 0 215 254 17 0 chr2 22718142 22718201 -230538382 + (TATG)n Simple_repeat Simple_repeat 2 61 0 466 283 131 5 chr2 22718302 22718500 -230538083 - MIR SINE MIR -6 256 34 408 288 18 59 chr2 22718498 22718668 -230537915 + L2 LINE L2 3147 3309 -4 * 305 336 28 9 chr2 22719546 22719653 -230536930 - MER5A DNA MER1_type -45 144 36 1135 203 7 27 chr2 22721304 22721600 -230534983 + L1MA4 LINE L1 6011 6300 0 2058 200 59 15 chr2 22722779 22723010 -230533573 - LOR1a LTR ERV1 0 497 278 1843 133 0 0 chr2 22723010 22723274 -230533309 + AluSx SINE Alu 35 298 -14 2058 200 59 15 chr2 22723274 22723518 -230533065 - LOR1a LTR ERV1 -219 278 1 1645 186 25 35 chr2 22725281 22725685 -230530898 + L1MA7 LINE L1 5885 6284 -7 183 42 0 0 chr2 22725932 22725956 -230530627 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 186 314 119 17 chr2 22726263 22726381 -230530202 - MIR3 SINE MIR -66 142 13 205 299 68 41 chr2 22726698 22726845 -230529738 + L2 LINE L2 3163 3313 0 569 280 111 69 chr2 22727352 22727731 -230528852 + L2 LINE L2 2915 3309 -4 191 381 103 0 chr2 22728416 22728513 -230528070 - L2 LINE L2 -221 3051 2945 406 274 94 33 chr2 22728990 22729202 -230527381 + MIR SINE MIR 36 260 -2 269 252 134 42 chr2 22729245 22729364 -230527219 + MIR3 SINE MIR 1 130 -78 2176 116 3 0 chr2 22729507 22729801 -230526782 - AluSg SINE Alu -15 295 1 325 333 145 0 chr2 22730121 22730238 -230526345 + L2 LINE L2 3137 3270 -2 330 321 54 45 chr2 22730284 22730508 -230526075 - MIR SINE MIR -9 253 28 31 0 0 0 chr2 22732810 22732841 -230523742 + AT_rich Low_complexity Low_complexity 1 31 0 229 319 70 57 chr2 22733060 22733217 -230523366 - L2 LINE L2 -244 3028 2870 22 0 0 0 chr2 22734945 22734967 -230521616 + AT_rich Low_complexity Low_complexity 1 22 0 278 208 69 0 chr2 22735464 22735536 -230521047 + MER103 DNA DNA 2 78 -88 1822 179 7 10 chr2 22735630 22735931 -230520652 + AluJb SINE Alu 2 301 -11 321 258 21 108 chr2 22736050 22736144 -230520439 - MIR SINE MIR -7 255 185 2232 94 3 16 chr2 22736144 22736451 -230520132 - AluSx SINE Alu -8 304 2 321 258 21 108 chr2 22736451 22736550 -230520033 - MIR SINE MIR -77 185 79 331 324 15 15 chr2 22736744 22736880 -230519703 + HAL1 LINE L1 1642 1777 -730 221 321 12 0 chr2 22739405 22739486 -230517097 + GA-rich Low_complexity Low_complexity 2 83 0 22 0 0 0 chr2 22739667 22739689 -230516894 + AT_rich Low_complexity Low_complexity 1 22 0 533 259 71 57 chr2 22740939 22741381 -230515202 + L1ME LINE L1 5316 5776 -345 251 350 82 0 chr2 22741829 22741926 -230514657 + MIR3 SINE MIR 95 199 -9 406 279 23 0 chr2 22742264 22742393 -230514190 + MER94 DNA DNA 3 134 0 381 211 179 0 chr2 22742758 22742853 -230513730 + MER81 DNA DNA 3 114 0 1890 164 26 26 chr2 22742962 22743352 -230513231 + MLT1B LTR MaLR 1 390 0 286 292 0 0 chr2 22744464 22744529 -230512054 + L2 LINE L2 3208 3272 0 641 332 122 11 chr2 22745515 22745885 -230510698 - MLT1J LTR MaLR -1 510 100 283 285 73 3 chr2 22746240 22746358 -230510225 + MIR SINE MIR 30 154 -63 326 275 101 18 chr2 22746373 22746482 -230510101 - L2 LINE L2 0 3272 3155 1889 168 10 23 chr2 22746890 22747193 -230509390 + AluJb SINE Alu 1 299 -13 4151 152 11 45 chr2 22747193 22748042 -230508541 + L1MA4 LINE L1 5481 6300 0 22 0 0 0 chr2 22749575 22749597 -230506986 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr2 22751666 22751694 -230504889 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 22751817 22751848 -230504735 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 22752169 22752193 -230504390 + AT_rich Low_complexity Low_complexity 1 24 0 254 150 0 17 chr2 22752488 22752548 -230504035 + (TG)n Simple_repeat Simple_repeat 2 60 0 846 293 45 45 chr2 22753470 22753828 -230502755 - L2 LINE L2 0 3313 2956 2068 129 7 26 chr2 22753902 22754205 -230502378 + AluSg SINE Alu 1 297 -13 331 274 24 0 chr2 22754772 22754856 -230501727 + L2 LINE L2 1225 1310 -2004 468 271 121 10 chr2 22754871 22755078 -230501505 - MLT1G LTR MaLR -358 232 3 2805 200 46 28 chr2 22755140 22755180 -230501403 + MER67B LTR ERV1 1 39 -622 2316 126 21 19 chr2 22755180 22755552 -230501031 + THE1C LTR MaLR 3 375 0 7389 157 57 38 chr2 22755552 22757097 -230499486 + THE1C-int LTR MaLR 5 1580 0 2257 157 5 11 chr2 22757097 22757474 -230499109 + THE1C LTR MaLR 1 375 0 2805 200 46 28 chr2 22757474 22758080 -230498503 + MER67B LTR ERV1 38 661 0 259 264 60 104 chr2 22758084 22758285 -230498298 - MLT1G-int LTR MaLR -69 1302 1111 1393 214 36 36 chr2 22759654 22760019 -230496564 - MLT1A1 LTR MaLR 0 365 1 951 292 71 21 chr2 22760021 22760498 -230496085 - MLT1G LTR MaLR -93 497 1 207 146 0 0 chr2 22760561 22760602 -230495981 + (CA)n Simple_repeat Simple_repeat 1 41 0 782 246 39 58 chr2 22760884 22761294 -230495289 - L1ME1 LINE L1 -5 6161 5760 2251 243 58 5 chr2 22761295 22761859 -230494724 + MLT1A1-int LTR MaLR 1137 1730 -5 1628 210 40 11 chr2 22761870 22762222 -230494361 + MLT1A1 LTR MaLR 1 362 -3 1009 213 12 12 chr2 22762229 22762473 -230494110 - L1ME1 LINE L1 -409 5757 5514 2067 93 3 93 chr2 22762893 22763225 -230493358 - AluSp SINE Alu -11 302 1 363 330 98 17 chr2 22763304 22763540 -230493043 - L2 LINE L2 -79 3234 2980 286 318 81 55 chr2 22763658 22763894 -230492689 - L2 LINE L2 -438 2876 2635 22096 156 23 9 chr2 22763903 22764111 -230492472 + L1PA10 LINE L1 1028 1232 -5251 216 0 0 0 chr2 22764111 22764135 -230492448 + (CAA)n Simple_repeat Simple_repeat 1 24 0 22096 156 23 9 chr2 22764135 22769265 -230487318 + L1PA10 LINE L1 1232 6483 0 479 349 24 31 chr2 22769382 22769637 -230486946 - L2 LINE L2 -757 2557 2305 1492 106 8 16 chr2 22769646 22769901 -230486682 + L1MA3 LINE L1 6017 6269 -36 23 0 0 0 chr2 22769901 22769924 -230486659 + AT_rich Low_complexity Low_complexity 1 23 0 621 279 129 59 chr2 22769958 22770600 -230485983 - L2 LINE L2 -1056 2258 1572 207 69 0 0 chr2 22770716 22770745 -230485838 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 2156 93 17 3 chr2 22770985 22771276 -230485307 + AluSg SINE Alu 8 302 -8 27 0 0 0 chr2 22771309 22771336 -230485247 + AT_rich Low_complexity Low_complexity 1 27 0 317 282 0 0 chr2 22772827 22772912 -230483671 + (ATG)n Simple_repeat Simple_repeat 1 85 0 207 69 0 0 chr2 22773528 22773557 -230483026 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1210 235 77 37 chr2 22776614 22776993 -230479590 - MSTD LTR MaLR 0 396 3 183 353 24 12 chr2 22778248 22778333 -230478250 + L3 LINE CR1 1371 1456 -121 204 316 61 20 chr2 22778433 22778531 -230478052 - MIR SINE MIR -155 107 6 196 353 102 21 chr2 22779963 22780095 -230476488 - MIR SINE MIR -68 140 6 184 255 20 0 chr2 22780311 22780362 -230476221 - L2 LINE L2 -83 3189 3138 216 287 42 91 chr2 22782003 22782091 -230474492 + L2 LINE L2 2600 2680 -634 1180 180 37 26 chr2 22782091 22782363 -230474220 - ORSL DNA AcHobo 0 275 1 216 287 42 91 chr2 22782363 22782417 -230474166 + L2 LINE L2 2680 2735 -579 250 377 35 10 chr2 22783149 22783348 -230473235 + MIR3 SINE MIR 2 205 -3 337 344 54 32 chr2 22784325 22784511 -230472072 - MIR SINE MIR -10 252 63 1923 147 0 38 chr2 22786523 22786837 -230469746 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr2 22787770 22787791 -230468792 + AT_rich Low_complexity Low_complexity 1 21 0 182 61 0 30 chr2 22789155 22789188 -230467395 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 554 106 0 0 chr2 22789189 22789274 -230467309 - L1PA13 LINE L1 -30 6133 6049 644 268 77 30 chr2 22789792 22790228 -230466355 - LTR33 LTR ERVL -5 516 25 308 338 26 19 chr2 22790864 22791018 -230465565 - MIR SINE MIR -5 257 103 277 217 43 6 chr2 22791146 22791307 -230465276 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 690 295 87 62 chr2 22792322 22792804 -230463779 - MLT1G1 LTR MaLR 0 595 102 1836 96 96 0 chr2 22795867 22796138 -230460445 + AluSg SINE Alu 1 297 -13 248 311 39 29 chr2 22796246 22796349 -230460234 + MIR3 SINE MIR 60 163 -45 1137 273 72 45 chr2 22796456 22797163 -230459420 - L2 LINE L2 -96 3217 2490 322 275 100 0 chr2 22798755 22798875 -230457708 - L2 LINE L2 -1362 1952 1821 243 0 0 0 chr2 22799172 22799199 -230457384 + (TG)n Simple_repeat Simple_repeat 1 27 0 606 217 37 25 chr2 22799321 22799482 -230457101 - MIR SINE MIR -56 206 44 183 100 0 0 chr2 22799835 22799865 -230456718 + (GGAAA)n Simple_repeat Simple_repeat 3 32 0 195 290 41 69 chr2 22800330 22800475 -230456108 - MIR SINE MIR -40 222 82 191 279 87 39 chr2 22800697 22800801 -230455782 - L3 LINE CR1 -90 1487 1379 185 314 0 0 chr2 22801244 22801295 -230455288 - L2 LINE L2 -16 3256 3206 213 250 18 18 chr2 22801751 22801807 -230454776 + L2 LINE L2 3209 3264 -49 216 97 0 0 chr2 22801817 22801848 -230454735 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 381 206 7 78 chr2 22802684 22802825 -230453758 + L1ME3 LINE L1 5832 5962 -200 203 342 237 0 chr2 22803073 22803187 -230453396 - MIR3 SINE MIR -49 159 19 283 291 120 0 chr2 22803871 22803988 -230452595 + MIR SINE MIR 96 226 -36 309 302 75 28 chr2 22804211 22804317 -230452266 - L3 LINE CR1 -60 1517 1407 22 56 0 0 chr2 22804908 22804944 -230451639 + AT_rich Low_complexity Low_complexity 1 36 0 2288 105 0 3 chr2 22805136 22805442 -230451141 + AluSg SINE Alu 1 305 -5 349 296 116 37 chr2 22806040 22806229 -230450354 - MIR SINE MIR -1 261 58 2152 118 3 7 chr2 22806236 22806540 -230450043 + AluSx SINE Alu 3 305 -7 2219 110 3 0 chr2 22806876 22807175 -230449408 + AluSx SINE Alu 1 300 -12 341 286 130 7 chr2 22807279 22807385 -230449198 + MIR SINE MIR 81 213 -49 225 0 0 0 chr2 22807385 22807410 -230449173 + (TA)n Simple_repeat Simple_repeat 1 25 0 341 286 130 7 chr2 22807410 22807457 -230449126 + MIR SINE MIR 213 253 -9 455 250 22 15 chr2 22808384 22808520 -230448063 - Charlie2a DNA MER1_type 0 2862 2726 551 189 31 66 chr2 22808539 22808735 -230447848 - Charlie2a DNA MER1_type -1202 1660 1472 733 288 66 28 chr2 22808901 22809189 -230447394 - Charlie2a DNA MER1_type -2477 305 7 258 239 34 111 chr2 22809272 22809389 -230447194 - MIR3 SINE MIR -7 201 94 2460 53 3 3 chr2 22809733 22810035 -230446548 - AluY SINE Alu -9 302 1 25 0 0 0 chr2 22814238 22814263 -230442320 + AT_rich Low_complexity Low_complexity 1 25 0 306 0 0 0 chr2 22814269 22814303 -230442280 + (CA)n Simple_repeat Simple_repeat 2 35 0 344 298 80 20 chr2 22814478 22814629 -230441954 + MER5A DNA MER1_type 2 161 -28 366 241 148 92 chr2 22814948 22815470 -230441113 - MER34C LTR ERV1 0 585 35 202 326 124 8 chr2 22816397 22816526 -230440057 - L2 LINE L2 -2 3270 3127 1020 196 99 48 chr2 22816639 22817013 -230439570 + MLT1C LTR MaLR 6 390 0 1143 49 0 0 chr2 22817462 22817604 -230438979 - L1PA8 LINE L1 -419 5753 5612 3243 71 7 0 chr2 22817614 22818036 -230438547 + L1PA8 LINE L1 5746 6170 -2 780 284 90 29 chr2 22818802 22819703 -230436880 + L1MEc LINE L1 705 1461 -4754 * 929 274 119 35 chr2 22819686 22820040 -230436543 + L1MEc LINE L1 2157 2480 -3735 1690 204 132 34 chr2 22820040 22820152 -230436431 + MLT2B1 LTR ERVL 4 104 -416 2560 43 0 3 chr2 22820152 22820456 -230436127 + AluY SINE Alu 1 303 -8 1690 204 132 34 chr2 22820456 22820759 -230435824 + MLT2B1 LTR ERVL 104 376 -144 189 107 0 0 chr2 22820759 22820787 -230435796 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 1690 204 132 34 chr2 22820787 22820800 -230435783 + MLT2B1 LTR ERVL 376 386 -134 219 36 0 0 chr2 22820800 22820828 -230435755 + (TG)n Simple_repeat Simple_repeat 2 29 0 1690 204 132 34 chr2 22820828 22820868 -230435715 + MLT2B1 LTR ERVL 386 520 0 929 274 119 35 chr2 22820868 22821220 -230435363 + L1MEc LINE L1 2480 2885 -3330 1216 198 118 19 chr2 22821220 22821533 -230435050 - MER2 DNA MER2_type 0 344 1 929 274 119 35 chr2 22821533 22821547 -230435036 + L1MEc LINE L1 2885 2896 -3319 956 254 19 29 chr2 22821573 22821865 -230434718 + L1MEc LINE L1 3402 3691 -2524 2269 137 64 17 chr2 22821865 22822274 -230434309 + MSTA LTR MaLR 1 428 0 956 254 19 29 chr2 22822274 22822355 -230434228 + L1MEc LINE L1 3691 3771 -2444 256 210 20 40 chr2 22822388 22822488 -230434095 + L1MC5 LINE L1 7612 7709 -252 238 237 53 0 chr2 22822543 22822619 -230433964 - MER116 DNA Mariner 0 80 1 183 80 0 0 chr2 22823368 22823393 -230433190 + (CA)n Simple_repeat Simple_repeat 2 26 0 308 217 33 50 chr2 22823524 22823644 -230432939 - LTR41 LTR ERVL -6 767 650 685 237 47 51 chr2 22823981 22824238 -230432345 - LTR41 LTR ERVL -501 272 17 686 281 76 5 chr2 22824404 22824614 -230431969 + MIR SINE MIR 28 252 -10 274 310 100 0 chr2 22825578 22825678 -230430905 + L2 LINE L2 3163 3272 0 306 50 0 0 chr2 22826525 22826565 -230430018 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 326 180 0 0 chr2 22826571 22826621 -230429962 - 5S rRNA rRNA -70 51 2 22 0 0 0 chr2 22826956 22826978 -230429605 + AT_rich Low_complexity Low_complexity 1 22 0 301 300 65 25 chr2 22826985 22827185 -230429398 + L1M4 LINE L1 2225 2432 -3714 248 304 72 0 chr2 22827493 22827631 -230428952 - MER104 DNA Tc2 -31 149 2 27 0 0 0 chr2 22827688 22827715 -230428868 + AT_rich Low_complexity Low_complexity 1 27 0 360 311 15 15 chr2 22827851 22827986 -230428597 + MLT1I LTR MaLR 80 214 -195 6188 145 26 10 chr2 22828118 22829109 -230427474 + THE1C-int LTR MaLR 574 1580 0 2413 113 21 37 chr2 22829109 22829447 -230427136 + THE1C LTR MaLR 1 334 -41 2255 115 3 0 chr2 22829447 22829752 -230426831 - AluSx SINE Alu -1 311 6 2413 113 21 37 chr2 22829752 22829794 -230426789 + THE1C LTR MaLR 334 375 0 10580 136 31 89 chr2 22829794 22830647 -230425936 + Tigger1 DNA MER2_type 282 1182 -1236 1944 119 3 77 chr2 22830647 22830983 -230425600 + AluSp SINE Alu 1 311 -2 10580 136 31 89 chr2 22830983 22831597 -230424986 + Tigger1 DNA MER2_type 1182 1764 -654 870 187 6 29 chr2 22831597 22831768 -230424815 + FRAM SINE Alu 1 163 -13 10580 136 31 89 chr2 22831768 22832318 -230424265 + Tigger1 DNA MER2_type 1764 2344 -74 1575 230 110 17 chr2 22832348 22832939 -230423644 + L1MC3 LINE L1 4744 5389 -757 258 250 0 0 chr2 22832936 22832996 -230423587 - L1 LINE L1 -1179 4967 4908 * 3636 197 54 5 chr2 22833023 22833746 -230422837 - L1 LINE L1 -1225 4921 4150 288 0 0 0 chr2 22833746 22833778 -230422805 + (TC)n Simple_repeat Simple_repeat 2 33 0 3636 197 54 5 chr2 22833778 22833883 -230422700 - L1 LINE L1 -1996 4150 4052 * 3702 173 41 35 chr2 22833881 22835017 -230421566 + L1MA9 LINE L1 4941 6081 -231 403 194 58 10 chr2 22835019 22835122 -230421461 + L1MA9 LINE L1 6180 6287 -25 45 19 0 0 chr2 22835125 22835177 -230421406 + AT_rich Low_complexity Low_complexity 1 52 0 7281 201 41 25 chr2 22835204 22835542 -230421041 + L1MC3 LINE L1 5386 5717 -2068 2590 39 3 0 chr2 22835542 22835883 -230420700 + AluY SINE Alu 1 342 0 7281 201 41 25 chr2 22835883 22837315 -230419268 + L1MC3 LINE L1 5717 7186 -599 630 302 108 0 chr2 22837317 22837585 -230418998 - MER110 LTR ERV1 -7 484 188 521 315 80 28 chr2 22837874 22838236 -230418347 + L1ME LINE L1 5335 5715 -455 21 0 0 0 chr2 22838321 22838342 -230418241 + AT_rich Low_complexity Low_complexity 1 21 0 2235 129 44 46 chr2 22838342 22838777 -230417806 + Tigger2a DNA MER2_type 1 434 0 2456 162 9 12 chr2 22839026 22839453 -230417130 + MSTB LTR MaLR 1 426 0 299 273 36 9 chr2 22839618 22839728 -230416855 - L1M4 LINE L1 -1201 4945 4833 1355 264 47 28 chr2 22839778 22840271 -230416312 - L1M4 LINE L1 -1319 4827 4326 647 276 0 54 chr2 22840271 22840456 -230416127 + MER8 DNA MER2_type 1 175 -64 408 148 0 111 chr2 22840491 22840572 -230416011 - Tigger2a DNA MER2_type -361 73 2 2534 232 26 19 chr2 22840573 22841297 -230415286 - L1M4 LINE L1 -1823 4323 3595 22 0 0 0 chr2 22841418 22841440 -230415143 + AT_rich Low_complexity Low_complexity 1 22 0 2473 67 0 13 chr2 22842029 22842344 -230414239 - AluY SINE Alu 0 311 1 472 328 123 0 chr2 22844805 22845009 -230411574 - MIR SINE MIR -10 252 24 501 348 26 31 chr2 22845339 22845566 -230411017 - MIR SINE MIR -14 248 23 429 293 75 11 chr2 22845968 22846156 -230410427 - HAL1 LINE L1 -1933 574 375 230 143 41 0 chr2 22846576 22846625 -230409958 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 192 356 43 26 chr2 22847278 22847372 -230409211 + MIR SINE MIR 30 128 -80 4406 101 16 0 chr2 22847372 22847997 -230408586 + MER41B LTR ERV1 1 635 0 192 356 43 26 chr2 22847997 22848017 -230408566 + MIR SINE MIR 128 146 -62 22 0 0 0 chr2 22848568 22848590 -230407993 + AT_rich Low_complexity Low_complexity 1 22 0 238 48 0 48 chr2 22848603 22848645 -230407938 + (TA)n Simple_repeat Simple_repeat 1 40 0 475 284 161 14 chr2 22848913 22849131 -230407452 + MIR SINE MIR 13 262 0 505 278 97 34 chr2 22849459 22849635 -230406948 + MIR SINE MIR 65 251 -11 282 316 33 40 chr2 22849665 22849817 -230406766 + L2 LINE L2 3146 3296 -17 1309 276 72 35 chr2 22850166 22851061 -230405522 + L1MEc LINE L1 2159 3037 -3178 383 332 91 18 chr2 22851203 22851437 -230405146 + L1MEc LINE L1 3041 3292 -2923 794 222 4 50 chr2 22851450 22851695 -230404888 + L1ME2 LINE L1 4467 4700 -1446 422 232 90 13 chr2 22851706 22851861 -230404722 + L1ME2 LINE L1 5281 5447 -715 366 236 79 0 chr2 22851885 22852012 -230404571 + L1ME2 LINE L1 5751 5887 -277 398 278 97 42 chr2 22852015 22852231 -230404352 + L1ME2 LINE L1 5936 6163 -1 298 328 56 31 chr2 22852224 22852245 -230404338 + L1MEc LINE L1 3398 3417 -2798 * 3293 130 43 26 chr2 22852245 22852828 -230403755 + LTR49 LTR ERV1 3 595 0 298 328 56 31 chr2 22852828 22853163 -230403420 + L1MEc LINE L1 3417 3763 -2452 814 268 98 40 chr2 22853339 22853958 -230402625 - L1M4 LINE L1 -1809 4337 3683 315 252 50 0 chr2 22854570 22854689 -230401894 - L1ME3A LINE L1 -4 6166 6042 2127 122 7 0 chr2 22854690 22854984 -230401599 + AluSx SINE Alu 1 296 -16 344 284 0 11 chr2 22854987 22855082 -230401501 - L1MC4 LINE L1 -1339 6703 6610 355 300 23 0 chr2 22855083 22855213 -230401370 - L1ME3A LINE L1 -123 6047 5915 618 266 86 5 chr2 22855215 22855437 -230401146 - L1ME3A LINE L1 -285 5885 5646 393 86 43 0 chr2 22855437 22855507 -230401076 - MER31-int LTR ERV1 -1985 2951 2879 2312 61 16 13 chr2 22855531 22855841 -230400742 - AluY SINE Alu 0 311 1 1096 171 6 0 chr2 22855844 22856020 -230400563 - AluJb SINE Alu -16 296 120 1231 94 42 5 chr2 22856040 22856232 -230400351 - L1PA3 LINE L1 0 6155 5957 879 263 67 24 chr2 22856232 22856520 -230400063 - L1ME3A LINE L1 -518 5652 5343 297 0 0 0 chr2 22856520 22856553 -230400030 + (TG)n Simple_repeat Simple_repeat 2 34 0 879 263 67 24 chr2 22856553 22856640 -230399943 - L1ME3A LINE L1 -827 5343 5261 308 230 50 80 chr2 22857977 22858077 -230398506 + MER91C DNA MER1_type 12 108 -32 249 33 0 0 chr2 22858833 22858863 -230397720 + (TG)n Simple_repeat Simple_repeat 1 30 0 256 219 0 78 chr2 22859041 22859105 -230397478 + MER115 DNA AcHobo 1 59 -634 2095 101 3 21 chr2 22859246 22859566 -230397017 - AluSx SINE Alu 0 315 1 1327 179 43 33 chr2 22860000 22860301 -230396282 + MLT2C1 LTR ERVL 93 396 -1 357 276 30 30 chr2 22860347 22860481 -230396102 - MLT1K LTR MaLR -338 250 117 270 321 46 55 chr2 22862044 22862153 -230394430 - MIR SINE MIR -58 150 43 326 339 130 28 chr2 22862599 22862776 -230393807 + MER91A DNA MER1_type 2 196 0 1056 208 55 104 chr2 22863485 22863819 -230392764 + MLT1A1 LTR MaLR 1 350 -15 450 0 0 0 chr2 22863819 22863869 -230392714 + (TA)n Simple_repeat Simple_repeat 1 50 0 279 0 0 0 chr2 22863868 22863899 -230392684 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 1056 208 55 104 chr2 22863869 22863948 -230392635 + MLT1A1 LTR MaLR 350 365 0 644 271 124 19 chr2 22864525 22864735 -230391848 - MIR SINE MIR -28 234 3 643 317 0 0 chr2 22865421 22865585 -230390998 - MIR SINE MIR -98 164 1 1129 171 9 46 chr2 22866329 22866545 -230390038 + AluJb SINE Alu 86 293 -19 226 147 0 0 chr2 22867323 22867357 -230389226 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 813 190 0 0 chr2 22867357 22867536 -230389047 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 204 345 84 49 chr2 22867628 22867770 -230388813 - L2 LINE L2 -5 3267 3121 245 274 48 36 chr2 22868138 22868222 -230388361 + MER96 DNA MER1_type? 91 175 0 2256 171 70 42 chr2 22868554 22869082 -230387501 - MER74A LTR ERVL -15 543 1 252 0 0 0 chr2 22870068 22870096 -230386487 + (A)n Simple_repeat Simple_repeat 1 28 0 1688 238 40 12 chr2 22870098 22870519 -230386064 + MLT1C LTR MaLR 35 467 0 1671 194 156 34 chr2 22871337 22871831 -230384752 + L1ME2 LINE L1 5611 6164 0 2165 99 3 0 chr2 22871842 22872213 -230384370 + AluSp SINE Alu 2 373 0 778 255 80 34 chr2 22873067 22873306 -230383277 + MIR SINE MIR 13 262 0 8585 196 33 134 chr2 22876750 22879117 -230377466 + L1M2 LINE L1 9 2056 -4793 1718 10 0 0 chr2 22879117 22879311 -230377272 - L1PA3 LINE L1 -5 6150 5957 8585 196 33 134 chr2 22879311 22879720 -230376863 + L1M2 LINE L1 2056 2505 -4344 2442 42 0 7 chr2 22879708 22880015 -230376568 + L1P LINE L1 2768 3072 -3074 * 563 180 0 18 chr2 22880004 22880115 -230376468 + L1M2 LINE L1 2494 2602 -4247 * 2200 155 5 8 chr2 22880118 22880492 -230376091 - THE1C LTR MaLR 0 375 3 9532 123 35 40 chr2 22880494 22882082 -230374501 - THE1C-int LTR MaLR 0 1580 1 2292 128 11 14 chr2 22882084 22882443 -230374140 - THE1C LTR MaLR -2 373 16 2033 209 33 31 chr2 22882445 22883206 -230373377 + L1M2 LINE L1 2601 3362 -3486 12129 237 22 9 chr2 22883226 22888236 -230368347 - L1PA16 LINE L1 -40 6183 899 4797 141 19 20 chr2 22888237 22889089 -230367494 + L1MA4A LINE L1 5443 6293 -10 28 29 0 0 chr2 22889542 22889577 -230367006 + AT_rich Low_complexity Low_complexity 1 35 0 1439 214 0 0 chr2 22889590 22889871 -230366712 - AluJb SINE Alu -31 281 1 3641 241 49 39 chr2 22889954 22891121 -230365462 + L1MCb LINE L1 1 1178 -4867 411 302 62 36 chr2 22891112 22891337 -230365246 + HAL1 LINE L1 1373 1603 -904 * 450 272 77 57 chr2 22891424 22891727 -230364856 + L1MCb LINE L1 3150 3445 -3119 1645 150 98 7 chr2 22891727 22892013 -230364570 + AluSx SINE Alu 1 312 0 450 272 77 57 chr2 22892013 22892463 -230364120 + L1MCb LINE L1 3445 3918 -2646 719 305 89 38 chr2 22892488 22892937 -230363646 - L2 LINE L2 -18 3295 2824 372 312 77 16 chr2 22892981 22893292 -230363291 + L1MCb LINE L1 3997 4326 -2238 750 366 65 11 chr2 22893413 22893782 -230362801 + LTR16A LTR ERVL 55 443 -7 846 310 113 33 chr2 22893805 22894075 -230362508 + ERVL LTR ERVL 4479 4726 -1038 2436 125 6 0 chr2 22894075 22894428 -230362155 - THE1A LTR MaLR 0 355 1 11037 102 5 29 chr2 22894428 22896047 -230360536 - THE1A-int LTR MaLR 0 1580 1 2486 105 8 0 chr2 22896047 22896399 -230360184 - THE1A LTR MaLR 0 355 1 846 310 113 33 chr2 22896399 22896675 -230359908 + ERVL LTR ERVL 4725 5071 -693 352 331 102 39 chr2 22896687 22896992 -230359591 + MLT1I LTR MaLR 1 324 -85 298 162 27 0 chr2 22896999 22897073 -230359510 + (TA)n Simple_repeat Simple_repeat 2 77 0 6540 183 31 41 chr2 22897369 22899754 -230356829 + L1MA7 LINE L1 4355 6706 -3 5601 148 18 11 chr2 22900189 22901056 -230355527 - L1PA16 LINE L1 -3 6163 5281 198 103 0 0 chr2 22901056 22901085 -230355498 + (CTTG)n Simple_repeat Simple_repeat 3 31 0 5601 148 18 11 chr2 22901085 22901452 -230355131 - L1PA16 LINE L1 -885 5281 4918 638 202 154 0 chr2 22901698 22901805 -230354778 - L1MA9 LINE L1 -39 6273 6184 273 57 0 0 chr2 22901805 22901840 -230354743 + (TG)n Simple_repeat Simple_repeat 2 36 0 638 202 154 0 chr2 22901840 22901920 -230354663 - L1MA9 LINE L1 -128 6184 6057 2843 13 0 0 chr2 22902893 22903203 -230353380 + AluYb8 SINE Alu 1 310 -8 25 0 0 0 chr2 22903869 22903894 -230352689 + AT_rich Low_complexity Low_complexity 1 25 0 28 61 0 0 chr2 22904003 22904052 -230352531 + AT_rich Low_complexity Low_complexity 1 49 0 304 271 36 6 chr2 22904052 22904218 -230352365 + (TA)n Simple_repeat Simple_repeat 2 172 0 683 274 152 25 chr2 22904443 22904804 -230351779 - MLT1J LTR MaLR -35 476 70 3989 77 0 0 chr2 22904816 22905350 -230351233 - L1P LINE L1 -3087 3059 2526 10659 74 4 12 chr2 22905350 22908131 -230348452 + L1PA7 LINE L1 3396 6154 0 4129 167 12 65 chr2 22910096 22911162 -230345421 - L1MB1 LINE L1 -1 6167 5146 1161 236 38 3 chr2 22911163 22911477 -230345106 + L1MB1 LINE L1 4797 5121 -1025 853 368 56 23 chr2 22911550 22912282 -230344301 + L2 LINE L2 1711 2466 -848 309 248 96 50 chr2 22912282 22912602 -230343981 - MER97b DNA MER1_type? 0 1053 768 22 56 0 0 chr2 22912728 22912764 -230343819 + AT_rich Low_complexity Low_complexity 1 36 0 1182 236 36 25 chr2 22912929 22913289 -230343294 - MER97b DNA MER1_type? -448 605 242 196 118 20 20 chr2 22913327 22913378 -230343205 + (TA)n Simple_repeat Simple_repeat 1 51 0 358 35 0 35 chr2 22913428 22913486 -230343097 + (TA)n Simple_repeat Simple_repeat 1 56 0 1901 105 61 107 chr2 22913493 22913658 -230342925 - THE1C LTR MaLR 0 375 204 234 0 0 0 chr2 22913658 22913684 -230342899 + (GA)n Simple_repeat Simple_repeat 1 26 0 1901 105 61 107 chr2 22913684 22913910 -230342673 - THE1C LTR MaLR -171 204 2 218 87 43 22 chr2 22913932 22913978 -230342605 + (TA)n Simple_repeat Simple_repeat 2 48 0 412 193 12 0 chr2 22914006 22914089 -230342494 - MER97a DNA MER1_type? -658 236 153 308 250 23 0 chr2 22914089 22914177 -230342406 + L1MD2 LINE L1 6048 6137 -222 266 246 0 0 chr2 22914181 22914246 -230342337 + (TA)n Simple_repeat Simple_repeat 2 66 0 2124 117 0 0 chr2 22914297 22914630 -230341953 - AluSg SINE Alu 0 333 1 422 225 70 8 chr2 22914650 22914779 -230341804 - MER97a DNA MER1_type? -749 145 9 423 346 61 24 chr2 22914866 22915195 -230341388 + L2 LINE L2 2543 2883 -431 1158 262 47 13 chr2 22915622 22916045 -230340538 - MERVL LTR ERVL -3264 2221 1742 329 328 15 51 chr2 22916059 22916254 -230340329 - MERVL LTR ERVL -3422 1574 1387 420 379 61 0 chr2 22916326 22916606 -230339977 - MERVL LTR ERVL -3711 1285 989 903 224 22 0 chr2 22916607 22916790 -230339793 - MER5A DNA MER1_type -2 187 1 414 353 34 11 chr2 22916806 22917072 -230339511 - MERVL LTR ERVL -4016 980 709 294 350 150 10 chr2 22917363 22917657 -230338926 - L2 LINE L2 -805 2509 2175 954 124 0 0 chr2 22917658 22917811 -230338772 + (TAGA)n Simple_repeat Simple_repeat 3 155 0 21 89 0 0 chr2 22918029 22918085 -230338498 + AT_rich Low_complexity Low_complexity 1 56 0 21 71 0 0 chr2 22920625 22920667 -230335916 + AT_rich Low_complexity Low_complexity 1 42 0 296 264 23 23 chr2 22920812 22920899 -230335684 + MLT2E LTR ERVL 34 120 -508 2195 84 54 3 chr2 22920909 22921205 -230335378 + AluSq SINE Alu 1 311 -2 287 350 20 0 chr2 22921205 22921305 -230335278 + MER81 DNA DNA 3 104 -10 825 287 59 72 chr2 22921306 22921835 -230334748 + MLT2E LTR ERVL 107 628 0 201 296 19 0 chr2 22922171 22922225 -230334358 + L2 LINE L2 3198 3252 -20 183 173 96 58 chr2 22923318 22923370 -230333213 - MIR3 SINE MIR -38 170 117 374 333 8 15 chr2 22924107 22924239 -230332344 + MIR3 SINE MIR 38 168 -40 393 305 136 86 chr2 22924330 22924772 -230331811 - L2 LINE L2 0 3272 2809 2124 291 61 9 chr2 22925464 22926149 -230330434 - L3 LINE CR1 -457 1120 400 374 296 43 17 chr2 22926277 22926392 -230330191 + L2 LINE L2 3196 3313 0 1158 231 0 4 chr2 22926498 22926723 -230329860 + MER58A DNA MER1_type 1 224 0 196 363 134 25 chr2 22926948 22927105 -230329478 - MIR SINE MIR -5 257 84 352 409 50 0 chr2 22931091 22931250 -230325333 + L2 LINE L2 3106 3272 0 564 304 27 11 chr2 22931582 22931766 -230324817 - MIR SINE MIR -13 249 63 1513 215 0 13 chr2 22931769 22932076 -230324507 - AluJo SINE Alu -9 303 1 229 324 14 0 chr2 22932470 22932541 -230324042 - L2 LINE L2 -1 3271 3200 1800 221 54 50 chr2 22935966 22936077 -230320506 - MER68 LTR ERV1 0 562 453 2303 125 3 55 chr2 22936077 22936461 -230320122 - THE1B LTR MaLR 0 364 1 1800 221 54 50 chr2 22936461 22936909 -230319674 - MER68 LTR ERV1 -109 453 1 322 302 101 0 chr2 22938738 22938877 -230317706 + MIR SINE MIR 18 170 -92 283 258 15 0 chr2 22939614 22939680 -230316903 - L3 LINE CR1 -2 1575 1509 1515 173 3 13 chr2 22939821 22940127 -230316456 - L1PB4 LINE L1 -268 5888 5586 715 264 0 0 chr2 22940126 22940300 -230316283 + L1PA16 LINE L1 5942 6115 -51 * 461 357 58 49 chr2 22940419 22940846 -230315737 + L2 LINE L2 2596 3032 -281 879 64 80 0 chr2 22940846 22940971 -230315612 - MER85 DNA T2_type -2 137 3 461 357 58 49 chr2 22940971 22941254 -230315329 + L2 LINE L2 3032 3311 -2 217 214 0 0 chr2 22941705 22941747 -230314836 + (TG)n Simple_repeat Simple_repeat 1 42 0 2164 105 66 0 chr2 22941755 22942087 -230314496 - THE1B LTR MaLR 0 364 11 181 333 0 0 chr2 22942110 22942158 -230314425 - L3 LINE CR1 -595 982 935 864 268 198 22 chr2 22942225 22942684 -230313899 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr2 22942808 22942829 -230313754 + AT_rich Low_complexity Low_complexity 1 21 0 258 343 117 54 chr2 22942856 22943278 -230313305 - L3 LINE CR1 -872 705 240 6962 62 2 1 chr2 22943278 22944351 -230312232 + L1PA5 LINE L1 5078 6151 -3 258 343 117 54 chr2 22944351 22944465 -230312118 - L3 LINE CR1 -1337 240 135 286 280 51 89 chr2 22945363 22945713 -230310870 + L1ME LINE L1 5311 5647 -474 2126 152 0 0 chr2 22945718 22946021 -230310562 + AluSq SINE Alu 1 303 -10 4186 86 50 3 chr2 22946873 22947454 -230309129 + LTR14B LTR ERVK 1 608 0 22 0 0 0 chr2 22947718 22947740 -230308843 + AT_rich Low_complexity Low_complexity 1 22 0 347 281 81 30 chr2 22948006 22948349 -230308234 - L1ME LINE L1 -542 5628 5258 33 0 0 0 chr2 22948993 22949026 -230307557 + AT_rich Low_complexity Low_complexity 1 33 0 209 385 10 10 chr2 22950105 22950209 -230306374 - L2 LINE L2 -244 3028 2925 31 26 0 0 chr2 22951533 22951571 -230305012 + AT_rich Low_complexity Low_complexity 1 38 0 418 303 67 30 chr2 22952076 22952241 -230304342 - MIR SINE MIR -28 234 64 232 227 0 0 chr2 22953114 22953158 -230303425 + L2 LINE L2 2703 2746 -568 1011 177 4 62 chr2 22953289 22953354 -230303229 - L1MD1 LINE L1 -5 6237 6170 2250 83 7 0 chr2 22953354 22953643 -230302940 + AluY SINE Alu 1 291 -20 1011 177 4 62 chr2 22953643 22953820 -230302763 - L1MD1 LINE L1 -72 6170 6009 1833 165 38 28 chr2 22953820 22954213 -230302370 - L1MD1 LINE L1 -564 5795 5399 1700 120 12 56 chr2 22954214 22954555 -230302028 + THE1C LTR MaLR 1 326 -49 337 339 130 28 chr2 22955073 22955250 -230301333 + MER91A DNA MER1_type 2 196 0 866 220 54 109 chr2 22955959 22956293 -230300290 + MLT1A1 LTR MaLR 1 352 -13 450 0 0 0 chr2 22956293 22956343 -230300240 + (TA)n Simple_repeat Simple_repeat 1 50 0 261 0 0 0 chr2 22956342 22956371 -230300212 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 866 220 54 109 chr2 22956343 22956422 -230300161 + MLT1A1 LTR MaLR 352 365 0 1564 182 5 39 chr2 22957082 22957540 -230299043 - L1M LINE L1 -751 5395 4965 182 174 22 0 chr2 22957562 22957608 -230298975 + CT-rich Low_complexity Low_complexity 3 49 0 247 163 0 0 chr2 22957625 22957668 -230298915 - L1M4 LINE L1 -1204 4942 4900 2042 149 0 0 chr2 22957680 22957976 -230298607 - AluSx SINE Alu -16 296 1 390 291 52 58 chr2 22959630 22959957 -230296626 - HsTC2 DNA Tc2 -1086 812 488 279 308 112 14 chr2 22960320 22960463 -230296120 + MIR SINE MIR 100 256 -6 203 303 45 22 chr2 22961153 22961242 -230295341 + L2 LINE L2 1468 1558 -1756 1483 234 112 27 chr2 22961243 22961806 -230294777 - L1MCb LINE L1 -4873 1172 562 944 301 18 6 chr2 22962006 22962332 -230294251 + MER93a LTR ERV1 73 402 0 633 284 44 68 chr2 22962347 22962756 -230293827 - L1MCb LINE L1 -5486 559 161 4657 52 3 0 chr2 22962992 22963571 -230293012 - L1PA7 LINE L1 0 6154 5574 567 215 9 9 chr2 22963582 22963689 -230292894 - MER5B DNA MER1_type -6 172 66 301 253 32 118 chr2 22963713 22963934 -230292649 + L2 LINE L2 2682 2883 -431 * 513 236 6 56 chr2 22963918 22964079 -230292504 - L2 LINE L2 0 3313 3161 189 195 0 0 chr2 22964082 22964123 -230292460 + (TA)n Simple_repeat Simple_repeat 1 41 0 3847 158 44 19 chr2 22964126 22965130 -230291453 - L1MB1 LINE L1 -81 6087 5058 1865 320 96 35 chr2 22965130 22966348 -230290235 - L2 LINE L2 -196 3117 1826 1012 309 63 50 chr2 22966352 22966886 -230289697 + L1ME LINE L1 6 532 -5538 1559 201 25 19 chr2 22966886 22967249 -230289334 - MLT1A1 LTR MaLR 0 365 1 1012 309 63 50 chr2 22967249 22967781 -230288802 + L1ME LINE L1 532 1086 -4984 566 266 121 32 chr2 22967785 22968033 -230288550 + L1ME LINE L1 1152 1421 -4840 328 147 29 0 chr2 23069388 23069456 -230187127 - L1MD2 LINE L1 -3 6356 6287 2170 130 0 9 chr2 23069458 23069774 -230186809 + AluSq SINE Alu 1 313 0 2236 111 0 7 chr2 23070078 23070375 -230186208 + AluSq SINE Alu 2 296 -17 872 167 30 15 chr2 23070403 23070601 -230185982 + L1MD3 LINE L1 7794 7994 -1 662 286 12 6 chr2 23071094 23071265 -230185318 - MER90 LTR ERV1 -442 172 1 498 223 67 80 chr2 23071666 23071718 -230184865 + MER112 DNA MER1_type 29 80 -180 321 26 0 0 chr2 23071718 23071756 -230184827 + (CA)n Simple_repeat Simple_repeat 2 39 0 498 223 67 80 chr2 23071756 23071927 -230184656 + MER112 DNA MER1_type 80 249 -11 2113 133 0 3 chr2 23072346 23072640 -230183943 + AluSx SINE Alu 1 293 -19 290 254 26 70 chr2 23073436 23073550 -230183033 - MER5A DNA MER1_type 0 189 70 2250 101 7 0 chr2 23075415 23075742 -230180841 + AluSg SINE Alu 7 335 0 579 265 99 24 chr2 23075744 23075997 -230180586 + L1ME1 LINE L1 5871 6142 -24 6682 174 35 10 chr2 23076425 23077637 -230178946 + MST-int LTR MaLR 216 1457 -194 852 251 5 5 chr2 23077643 23077850 -230178733 - AluJb SINE Alu 0 312 106 1765 129 82 0 chr2 23078819 23079099 -230177484 + AluJb SINE Alu 1 303 -9 1467 166 25 7 chr2 23079580 23079863 -230176720 + L1MA4A LINE L1 6016 6303 0 191 316 93 53 chr2 23080099 23080324 -230176259 - L3 LINE CR1 -15 1562 1329 252 238 16 16 chr2 23081293 23081356 -230175227 + CT-rich Low_complexity Low_complexity 2 64 0 342 238 91 11 chr2 23081359 23081532 -230175051 - L1MC4 LINE L1 0 8042 7725 244 309 43 0 chr2 23081628 23081722 -230174861 + MIR SINE MIR 28 125 -137 216 188 165 24 chr2 23081888 23081973 -230174610 + MIR SINE MIR 79 175 -87 215 323 31 0 chr2 23082104 23082200 -230174383 + MIR SINE MIR 23 121 -141 21 0 0 0 chr2 23082205 23082226 -230174357 + AT_rich Low_complexity Low_complexity 1 21 0 602 173 0 39 chr2 23082232 23082359 -230174224 + L1PB3 LINE L1 6033 6154 0 23 54 0 0 chr2 23082359 23082396 -230174187 + AT_rich Low_complexity Low_complexity 1 37 0 603 239 137 24 chr2 23082766 23082971 -230173612 - MIR SINE MIR 0 262 35 413 266 26 9 chr2 23083137 23083250 -230173333 - L2 LINE L2 -21 3251 3137 24 0 0 0 chr2 23084349 23084373 -230172210 + AT_rich Low_complexity Low_complexity 1 24 0 1566 153 47 4 chr2 23085493 23085748 -230170835 + AluJb SINE Alu 1 266 -46 2181 121 3 0 chr2 23085780 23086069 -230170514 + AluSx SINE Alu 1 290 -22 2368 81 3 0 chr2 23086455 23086750 -230169833 - AluY SINE Alu -15 296 1 1383 162 4 9 chr2 23086758 23086986 -230169597 - THE1C LTR MaLR -148 227 1 357 101 145 159 chr2 23087693 23087741 -230168842 - MIR SINE MIR -24 238 191 1604 123 0 13 chr2 23087741 23087969 -230168614 + AluSc SINE Alu 83 307 -2 357 101 145 159 chr2 23087969 23088058 -230168525 - MIR SINE MIR -71 191 103 232 274 68 68 chr2 23088062 23088208 -230168375 + MIR3 SINE MIR 2 147 -61 24 0 0 0 chr2 23088734 23088758 -230167825 + AT_rich Low_complexity Low_complexity 1 24 0 1774 180 23 0 chr2 23088760 23089065 -230167518 + AluJb SINE Alu 1 312 0 573 295 121 43 chr2 23089104 23089450 -230167133 + L3 LINE CR1 1119 1491 -86 733 277 46 35 chr2 23089450 23089735 -230166848 + L1ME LINE L1 5328 5615 -506 246 243 57 0 chr2 23090174 23090244 -230166339 + MIR SINE MIR 78 151 -111 25 0 0 0 chr2 23192170 23192195 -230064388 + AT_rich Low_complexity Low_complexity 1 25 0 4519 138 42 22 chr2 23192196 23192950 -230063633 - L1PA16 LINE L1 -10 6156 5388 193 342 60 43 chr2 23193120 23193354 -230063229 - L2 LINE L2 -924 2390 2153 197 83 28 0 chr2 23194031 23194067 -230062516 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 292 333 43 62 chr2 23194457 23194667 -230061916 + L2 LINE L2 2633 2838 -476 1699 176 29 67 chr2 23194693 23195069 -230061514 + MLT1A1 LTR MaLR 4 365 0 247 200 0 0 chr2 23195075 23195120 -230061463 - MER92C LTR ERV1 -19 535 491 468 311 31 31 chr2 23195148 23195373 -230061210 - MER92C LTR ERV1 -329 225 1 221 353 59 8 chr2 23195519 23195638 -230060945 + MIR SINE MIR 120 244 -18 257 359 11 0 chr2 23195812 23195904 -230060679 - L2 LINE L2 -59 3213 3121 341 136 15 0 chr2 23196302 23196368 -230060215 + (CA)n Simple_repeat Simple_repeat 1 67 0 2120 160 36 0 chr2 23197272 23197603 -230058980 + MER2 DNA MER2_type 2 344 0 684 241 52 29 chr2 23197630 23197804 -230058779 - MER45A DNA AcHobo 0 178 1 281 250 0 0 chr2 23197804 23197860 -230058723 - MIR3 SINE MIR -38 170 115 445 284 34 7 chr2 23197946 23198094 -230058489 + MIR SINE MIR 65 216 -46 224 299 104 104 chr2 23198379 23198523 -230058060 + MER5A DNA MER1_type 46 189 0 2128 129 3 3 chr2 23199067 23199245 -230057338 - AluSx SINE Alu -3 309 129 285 51 0 0 chr2 23199245 23199284 -230057299 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2128 129 3 3 chr2 23199284 23199414 -230057169 - AluSx SINE Alu -182 130 1 192 204 76 134 chr2 23200053 23200210 -230056373 + L2 LINE L2 3090 3237 -76 1846 185 36 11 chr2 23200567 23200923 -230055660 - MLT1A1 LTR MaLR 0 365 1 281 178 0 0 chr2 23201108 23201153 -230055430 + L2 LINE L2 3227 3271 -1 2188 94 17 0 chr2 23201350 23201637 -230054946 + AluSx SINE Alu 10 301 -11 225 339 129 29 chr2 23202577 23202857 -230053726 + L2 LINE L2 2965 3272 0 26 30 0 0 chr2 23202975 23203008 -230053575 + AT_rich Low_complexity Low_complexity 1 33 0 1200 189 8 89 chr2 23203345 23203584 -230052999 + MER33 DNA MER1_type 1 196 -2389 1963 158 3 0 chr2 23203584 23204073 -230052510 + AluSx SINE Alu 1 490 0 1200 189 8 89 chr2 23204073 23204193 -230052390 + MER33 DNA MER1_type 196 324 0 606 286 83 5 chr2 23204992 23205209 -230051374 - MLT1B LTR MaLR -1 566 333 230 308 42 17 chr2 23206747 23206867 -230049716 + L2 LINE L2 2453 2575 -739 880 268 104 45 chr2 23206900 23207344 -230049239 + MLT2B1 LTR ERVL 5 474 -46 35 71 0 0 chr2 23207347 23207417 -230049166 + AT_rich Low_complexity Low_complexity 1 70 0 354 60 90 0 chr2 23207424 23207524 -230049059 + (TA)n Simple_repeat Simple_repeat 2 110 0 239 214 14 0 chr2 23207527 23207597 -230048986 + MLT2B1 LTR ERVL 450 520 0 1687 207 21 54 chr2 23207597 23207983 -230048600 - MLT1B LTR MaLR -17 373 1 35 71 0 0 chr2 23208758 23208828 -230047755 + AT_rich Low_complexity Low_complexity 1 70 0 100 95 0 0 chr2 23208829 23209125 -230047458 + AT_rich Low_complexity Low_complexity 1 296 0 286 243 81 75 chr2 23211625 23211798 -230044785 - MIR3 SINE MIR -21 187 14 240 330 18 37 chr2 23213630 23213848 -230042735 + L1ME LINE L1 5562 5775 -387 2113 139 0 0 chr2 23213958 23214260 -230042323 + AluSg SINE Alu 1 302 -8 353 288 85 8 chr2 23214497 23214615 -230041968 - L2 LINE L2 0 3313 3187 365 313 8 0 chr2 23215838 23215972 -230040611 + L1ME1 LINE L1 5577 5711 -410 21 36 0 0 chr2 23216832 23216860 -230039723 + AT_rich Low_complexity Low_complexity 1 28 0 2139 100 7 0 chr2 23216895 23217175 -230039408 - AluSx SINE Alu -14 298 17 260 302 32 24 chr2 23217178 23217304 -230039279 + MIR SINE MIR 73 199 -63 740 244 51 51 chr2 23218425 23218736 -230037847 + MLT1I LTR MaLR 96 406 -3 502 292 76 11 chr2 23218919 23219104 -230037479 + MIR SINE MIR 11 207 -55 22 56 0 0 chr2 23219136 23219172 -230037411 + AT_rich Low_complexity Low_complexity 1 36 0 198 413 14 22 chr2 23219412 23219550 -230037033 - L2 LINE L2 -940 2374 2238 268 317 50 59 chr2 23220433 23220654 -230035929 - L2 LINE L2 -428 2886 2668 1678 157 17 9 chr2 23221909 23222461 -230034122 + L1M1 LINE L1 4970 5527 -743 2248 240 86 19 chr2 23222713 23223409 -230033174 - L1ME1 LINE L1 -4 6162 5420 283 200 136 9 chr2 23223415 23223525 -230033058 - L1ME1 LINE L1 0 6166 6043 3108 125 33 2 chr2 23223641 23224154 -230032429 - L1MA3 LINE L1 0 6305 5777 641 127 5 196 chr2 23224162 23224382 -230032201 + 7SK RNA RNA 15 192 -1 1432 232 65 18 chr2 23224385 23224897 -230031686 - L1ME1 LINE L1 -733 5433 4901 1155 258 78 5 chr2 23224905 23225301 -230031282 + L1ME1 LINE L1 5738 6162 -4 316 148 35 61 chr2 23225874 23225989 -230030594 + (TATAA)n Simple_repeat Simple_repeat 5 116 0 23 33 0 0 chr2 23226196 23226226 -230030357 + AT_rich Low_complexity Low_complexity 1 30 0 1980 147 7 3 chr2 23226516 23226823 -230029760 + AluSx SINE Alu 1 308 -4 23 0 0 0 chr2 23227267 23227290 -230029293 + AT_rich Low_complexity Low_complexity 1 23 0 2145 106 3 3 chr2 23227373 23227665 -230028918 - AluSx SINE Alu -20 292 1 21 71 0 0 chr2 23227748 23227790 -230028793 + AT_rich Low_complexity Low_complexity 1 42 0 624 346 51 21 chr2 23228091 23228577 -230028006 - LTR33 LTR ERVL 0 521 21 2506 299 33 56 chr2 23228751 23229260 -230027323 - L2 LINE L2 -688 2626 2150 608 102 51 0 chr2 23229260 23229358 -230027225 + L1PA14 LINE L1 6059 6161 0 2506 299 33 56 chr2 23229358 23229849 -230026734 - L2 LINE L2 -1164 2150 1649 264 350 127 35 chr2 23231657 23231917 -230024666 + L2 LINE L2 2812 3095 -177 307 274 71 9 chr2 23232786 23232899 -230023684 - MIR SINE MIR -62 200 81 200 312 39 26 chr2 23232908 23232985 -230023598 + L2 LINE L2 3236 3313 0 1999 137 7 0 chr2 23234018 23234310 -230022273 + AluSq SINE Alu 1 294 -19 234 294 49 39 chr2 23234961 23235063 -230021520 - MIR3 SINE MIR -94 114 12 182 338 103 0 chr2 23235580 23235648 -230020935 + L2 LINE L2 3116 3190 -82 287 376 73 47 chr2 23236536 23237098 -230019485 + L2 LINE L2 2696 3267 -5 245 376 67 61 chr2 23237242 23237617 -230018966 + L3 LINE CR1 126 502 -1075 1533 243 63 22 chr2 23237637 23238188 -230018395 + L1MCc LINE L1 389 962 -4946 834 236 32 23 chr2 23238191 23238407 -230018176 + MER58A DNA MER1_type 6 223 -1 340 216 85 81 chr2 23238460 23238743 -230017840 + L1MCc LINE L1 1076 1528 -5079 902 322 154 43 chr2 23238767 23239617 -230016966 + L3 LINE CR1 530 1473 -104 443 321 44 0 chr2 23239775 23239934 -230016649 - L2 LINE L2 -934 2380 2215 846 184 54 38 chr2 23239949 23240188 -230016395 - MER33 DNA MER1_type -81 243 1 282 306 112 15 chr2 23240250 23240384 -230016199 - L2 LINE L2 -1215 2099 1953 586 183 111 151 chr2 23243420 23243573 -230013010 - MIR SINE MIR -10 252 111 1890 177 0 3 chr2 23243573 23243878 -230012705 + AluJb SINE Alu 8 311 -1 586 183 111 151 chr2 23243878 23243976 -230012607 - MIR SINE MIR -151 111 11 639 153 0 9 chr2 23243983 23244094 -230012489 - AluSp SINE Alu -203 110 1 760 86 0 0 chr2 23244621 23244726 -230011857 + L1PA5 LINE L1 6047 6151 -3 189 0 0 0 chr2 23244766 23244787 -230011796 + (A)n Simple_repeat Simple_repeat 1 21 0 4028 110 40 12 chr2 23244887 23245569 -230011014 + L1MA2 LINE L1 5604 6304 0 534 267 45 95 chr2 23248739 23249021 -230007562 + MER5C DNA MER1_type 3 298 -26 296 24 24 0 chr2 23249021 23249062 -230007521 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 2389 60 0 3 chr2 23249067 23249374 -230007209 + AluY SINE Alu 1 306 0 534 267 45 95 chr2 23249374 23249421 -230007162 + MER5C DNA MER1_type 302 322 -2 332 283 28 38 chr2 23249450 23249556 -230007027 + L2 LINE L2 3168 3272 -41 324 0 0 0 chr2 23249560 23249596 -230006987 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1722 269 61 20 chr2 23250192 23250747 -230005836 - MLT1G LTR MaLR -3 587 10 5552 115 7 16 chr2 23250911 23251830 -230004753 + L1PA13 LINE L1 5254 6163 0 994 236 140 12 chr2 23252054 23252389 -230004194 + L1MC4 LINE L1 7207 7584 -458 982 113 7 1 chr2 23252431 23252592 -230003991 + L1PA13 LINE L1 5754 5913 -250 314 211 23 83 chr2 23252595 23252728 -230003855 + L1MC4 LINE L1 7918 8042 0 573 272 57 59 chr2 23252977 23253424 -230003159 - MLT1J LTR MaLR 0 511 4 230 237 0 17 chr2 23253732 23253791 -230002792 + (CA)n Simple_repeat Simple_repeat 1 58 0 802 257 59 0 chr2 23254856 23255093 -230001490 + MIR SINE MIR 4 254 -8 233 57 29 0 chr2 23255094 23255129 -230001454 + (TTA)n Simple_repeat Simple_repeat 3 38 0 198 364 16 25 chr2 23255144 23255265 -230001318 - L2 LINE L2 -1406 1908 1789 225 320 67 0 chr2 23255479 23255595 -230000988 - MIR SINE MIR -66 142 74 2190 96 0 68 chr2 23255620 23255943 -230000640 - AluSx SINE Alu -11 301 1 1939 136 39 0 chr2 23256778 23257064 -229999519 - AluSg SINE Alu -13 297 1 1526 177 51 77 chr2 23257369 23257877 -229998706 - MLT1D LTR MaLR -5 500 6 305 278 22 0 chr2 23259917 23260007 -229996576 + L1ME4a LINE L1 5770 5861 -260 33 25 0 0 chr2 23260102 23260142 -229996441 + AT_rich Low_complexity Low_complexity 1 40 0 243 88 0 0 chr2 23260274 23260308 -229996275 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 329 321 22 22 chr2 23261274 23261411 -229995172 + MIR SINE MIR 36 172 -90 1133 225 48 16 chr2 23261412 23261786 -229994797 + MER74C LTR ERVL 4 538 -84 2259 113 0 0 chr2 23261936 23262237 -229994346 + AluSx SINE Alu 1 301 -11 246 308 31 8 chr2 23262378 23262508 -229994075 + MLT1J2 LTR MaLR 46 178 -272 2268 252 107 87 chr2 23263013 23263754 -229992829 + L1ME1 LINE L1 36 760 -5475 846 64 112 0 chr2 23263754 23263879 -229992704 + MER85 DNA T2_type 1 139 0 2268 252 107 87 chr2 23263879 23264605 -229991978 + L1ME1 LINE L1 760 1470 -4765 2281 91 3 0 chr2 23264605 23264892 -229991691 + AluSg SINE Alu 1 288 -22 2268 252 107 87 chr2 23264892 23265410 -229991173 + L1ME1 LINE L1 1470 1976 -4259 411 255 52 83 chr2 23265410 23265602 -229990981 - MER5A DNA MER1_type -1 188 3 2268 252 107 87 chr2 23265602 23267043 -229989540 + L1ME1 LINE L1 1976 3386 -2849 587 69 0 35 chr2 23267043 23267130 -229989453 - AluSc SINE Alu -6 303 220 2268 252 107 87 chr2 23267130 23267606 -229988977 + L1ME1 LINE L1 3386 3851 -2384 2406 92 3 0 chr2 23267606 23267912 -229988671 - AluSc SINE Alu -2 307 1 2268 252 107 87 chr2 23267912 23268124 -229988459 + L1ME1 LINE L1 3851 4057 -2178 1538 188 0 8 chr2 23268124 23268390 -229988193 + AluJo SINE Alu 1 264 -48 2268 252 107 87 chr2 23268390 23270282 -229986301 + L1ME1 LINE L1 4057 6216 -19 513 320 70 10 chr2 23270681 23270881 -229985702 + MIR SINE MIR 47 258 -4 48 43 0 0 chr2 23271029 23271098 -229985485 + AT_rich Low_complexity Low_complexity 1 69 0 372 237 58 36 chr2 23272422 23272561 -229984022 + MLT1J2 LTR MaLR 67 208 -242 349 163 0 62 chr2 23272692 23272772 -229983811 + MLT1I LTR MaLR 335 409 0 257 248 76 102 chr2 23273010 23273167 -229983416 - MIR SINE MIR -77 185 33 519 240 97 40 chr2 23274043 23274218 -229982365 + MIR SINE MIR 29 213 -49 203 194 0 0 chr2 23274218 23274254 -229982329 + (TA)n Simple_repeat Simple_repeat 1 36 0 321 175 0 18 chr2 23274400 23274457 -229982126 + L2 LINE L2 3254 3309 -4 298 241 17 0 chr2 23274834 23274892 -229981691 - L3 LINE CR1 -7 1570 1512 6246 140 55 27 chr2 23275279 23275884 -229980699 - Tigger3b DNA MER2_type -1797 1231 645 2180 114 7 0 chr2 23275884 23276182 -229980401 + AluSx SINE Alu 1 300 -12 6246 140 55 27 chr2 23276182 23276211 -229980372 - Tigger3b DNA MER2_type -2383 645 618 246 32 0 0 chr2 23276211 23276242 -229980341 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6246 140 55 27 chr2 23276242 23276279 -229980304 - Tigger3b DNA MER2_type -2410 618 584 2547 33 3 3 chr2 23276279 23276580 -229980003 + AluY SINE Alu 1 301 -10 6246 140 55 27 chr2 23276580 23277103 -229979480 - Tigger3b DNA MER2_type -2444 584 1 255 157 0 0 chr2 23277729 23277780 -229978803 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 207 379 30 6 chr2 23278253 23278422 -229978161 - MIR SINE MIR -37 225 53 750 296 27 27 chr2 23282197 23282454 -229974129 - MIR SINE MIR 0 262 6 2063 107 30 10 chr2 23282546 23282846 -229973737 + AluSx SINE Alu 1 306 -6 400 296 146 10 chr2 23282957 23283163 -229973420 + MIR SINE MIR 6 239 -23 766 228 97 107 chr2 23284507 23284844 -229971739 - MLT1J2 LTR MaLR -16 434 100 1831 130 121 18 chr2 23284844 23285174 -229971409 + THE1B LTR MaLR 1 364 0 766 228 97 107 chr2 23285174 23285258 -229971325 - MLT1J2 LTR MaLR -350 100 17 211 189 75 19 chr2 23285262 23285315 -229971268 - L2 LINE L2 -209 3063 3008 1141 171 87 87 chr2 23286198 23286577 -229970006 - MLT1B LTR MaLR -11 379 1 22 35 0 0 chr2 23287695 23287724 -229968859 + AT_rich Low_complexity Low_complexity 1 29 0 235 234 0 0 chr2 23288172 23288219 -229968364 + (TG)n Simple_repeat Simple_repeat 1 47 0 552 224 0 0 chr2 23290957 23291073 -229965510 + MER94 DNA DNA 13 128 -6 222 323 0 0 chr2 23291443 23291505 -229965078 + MIR SINE MIR 183 244 -18 225 0 0 0 chr2 23291542 23291567 -229965016 + (CA)n Simple_repeat Simple_repeat 2 26 0 233 296 40 16 chr2 23291682 23291807 -229964776 + L1ME LINE L1 5695 5822 -299 493 303 45 90 chr2 23292086 23292353 -229964230 + L2 LINE L2 3014 3268 -4 470 302 34 39 chr2 23292686 23292865 -229963718 - MIR3 SINE MIR -10 198 21 343 340 101 44 chr2 23293870 23294417 -229962166 + L2 LINE L2 2674 3252 -20 561 239 0 67 chr2 23294505 23294685 -229961898 - L2 LINE L2 -9 3304 3137 495 336 41 41 chr2 23294816 23295185 -229961398 - L1ME LINE L1 -347 5774 5406 1289 218 140 21 chr2 23296017 23296928 -229959655 - L1ME1 LINE L1 -10 6156 5127 192 427 8 17 chr2 23297092 23297209 -229959374 + MIR SINE MIR 20 135 -73 879 175 21 0 chr2 23297219 23297383 -229959200 - FRAM SINE Alu 0 166 1 24 53 0 0 chr2 23297738 23297776 -229958807 + AT_rich Low_complexity Low_complexity 1 38 0 508 271 197 12 chr2 23298289 23298562 -229958021 + L2 LINE L2 2674 2995 -318 492 233 43 0 chr2 23298563 23298679 -229957904 - MER45A DNA AcHobo 0 178 58 341 107 18 0 chr2 23298697 23298753 -229957830 - THE1C LTR MaLR 0 375 319 180 77 0 0 chr2 23298756 23298782 -229957801 + (T)n Simple_repeat Simple_repeat 1 26 0 12103 13 0 0 chr2 23298782 23301018 -229955565 - L1HS LINE L1 0 6155 3920 2465 199 22 41 chr2 23301133 23301650 -229954933 - L1M1 LINE L1 -6980 585 79 2509 92 123 2 chr2 23301650 23302050 -229954533 + LTR7 LTR ERV1 1 448 -2 2465 199 22 41 chr2 23302050 23302115 -229954468 - L1M1 LINE L1 -7486 79 14 341 331 24 8 chr2 23303175 23303299 -229953284 - MIR SINE MIR -60 148 23 440 278 137 50 chr2 23303454 23303753 -229952830 - L2 LINE L2 -1 3312 2988 2198 121 3 9 chr2 23303778 23304118 -229952465 + THE1C LTR MaLR 1 338 -37 40719 32 26 1 chr2 23304118 23310118 -229946465 + L1PA2 LINE L1 6 6155 0 1694 212 127 97 chr2 23312097 23312941 -229943642 - L1MC4 LINE L1 -4 8038 7170 364 296 24 52 chr2 23313795 23313938 -229942645 + MIR SINE MIR 20 161 -65 440 292 118 50 chr2 23314039 23314361 -229942222 - L2 LINE L2 -126 3187 2844 679 252 97 26 chr2 23314402 23314628 -229941955 + MIR SINE MIR 21 262 0 251 288 150 0 chr2 23314743 23314823 -229941760 + L2 LINE L2 3160 3251 -21 433 241 35 64 chr2 23315823 23315964 -229940619 - MIR3 SINE MIR -3 205 69 275 286 53 105 chr2 23316143 23316276 -229940307 + MIR3 SINE MIR 44 169 -39 861 249 23 0 chr2 23316278 23316455 -229940128 - MER5A DNA MER1_type 0 189 9 1227 180 78 32 chr2 23317149 23317508 -229939075 + MSTC LTR MaLR 1 428 0 320 224 0 0 chr2 23318415 23318482 -229938101 + L1MB2 LINE L1 6069 6135 -36 771 175 8 0 chr2 23318501 23318627 -229937956 + L1MB5 LINE L1 6040 6166 -8 246 62 0 0 chr2 23318645 23318677 -229937906 + (CA)n Simple_repeat Simple_repeat 2 33 0 251 280 134 19 chr2 23318809 23318966 -229937617 + L2 LINE L2 665 839 -2475 202 250 26 0 chr2 23319810 23319886 -229936697 + (TA)n Simple_repeat Simple_repeat 1 78 0 2727 133 36 83 chr2 23319947 23320450 -229936133 - MLT2B1 LTR ERVL -41 479 1 276 137 0 0 chr2 23320460 23320511 -229936072 + (TA)n Simple_repeat Simple_repeat 2 52 0 1198 171 0 38 chr2 23320512 23320722 -229935861 - AluJb SINE Alu -23 289 88 683 229 91 97 chr2 23320801 23321037 -229935546 + MER46C DNA MER2_type 1 236 -102 316 0 0 43 chr2 23321037 23321083 -229935500 + (TG)n Simple_repeat Simple_repeat 2 45 0 683 229 91 97 chr2 23321083 23321186 -229935397 + MER46C DNA MER2_type 236 338 0 2027 171 42 21 chr2 23321392 23321608 -229934975 + MLT1B LTR MaLR 4 233 -157 2153 107 19 105 chr2 23321608 23322018 -229934565 - THE1C LTR MaLR 0 375 1 2027 171 42 21 chr2 23322018 23322180 -229934403 + MLT1B LTR MaLR 233 390 0 37 39 0 0 chr2 23323115 23323166 -229933417 + AT_rich Low_complexity Low_complexity 1 51 0 2363 73 3 13 chr2 23323816 23324119 -229932464 - AluSp SINE Alu -13 300 1 2238 245 61 11 chr2 23325609 23326165 -229930418 - MLT1E LTR MaLR -8 585 2 183 42 0 0 chr2 23327434 23327458 -229929125 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 228 333 14 62 chr2 23327528 23327672 -229928911 + MIR SINE MIR 41 177 -85 376 230 58 0 chr2 23329158 23329245 -229927338 + MER5A DNA MER1_type 16 107 -82 3150 168 59 35 chr2 23330374 23331303 -229925280 - L1MA9 LINE L1 -659 5653 4690 1950 154 0 18 chr2 23331285 23331616 -229924967 + L1MA9 LINE L1 5636 5960 -352 * 38869 40 27 3 chr2 23331719 23336477 -229920106 - L1P LINE L1 -1272 4874 3 268 231 0 44 chr2 23336530 23336621 -229919962 + T-rich Low_complexity Low_complexity 3 89 0 198 224 26 79 chr2 23337215 23337291 -229919292 - L2 LINE L2 -16 3256 3185 * 544 299 74 30 chr2 23337271 23337502 -229919081 + MIR SINE MIR 6 246 -16 266 285 91 31 chr2 23338353 23338649 -229917934 - L1ME LINE L1 -502 5619 5306 300 284 50 28 chr2 23338980 23339121 -229917462 - MLT1J LTR MaLR -2 509 366 2384 107 0 0 chr2 23340322 23340632 -229915951 - AluY SINE Alu -1 310 1 2559 243 103 26 chr2 23341073 23341770 -229914813 - MER21B LTR ERV1 -58 805 55 237 224 0 0 chr2 23341962 23342020 -229914563 + CT-rich Low_complexity Low_complexity 5 62 0 370 313 62 82 chr2 23342062 23342414 -229914169 - L2 LINE L2 -2 3270 2926 761 272 18 13 chr2 23342487 23342711 -229913872 - MIR SINE MIR -1 261 37 322 251 67 41 chr2 23342830 23343025 -229913558 + Charlie7 DNA MER1_type 2408 2607 -5 869 184 6 13 chr2 23343037 23343195 -229913388 + MER5A DNA MER1_type 1 157 -32 1697 206 51 49 chr2 23343937 23344428 -229912155 - Charlie4a DNA MER1_type 0 508 17 317 326 34 0 chr2 23344872 23344961 -229911622 - MIR3 SINE MIR -19 189 98 1393 247 161 21 chr2 23344963 23345448 -229911135 - MLT1H1 LTR MaLR -2 553 1 472 281 75 100 chr2 23345448 23345797 -229910786 - MLT1H1-int LTR MaLR 0 1371 1032 7690 133 25 14 chr2 23346342 23347016 -229909567 - L1MA2 LINE L1 0 7723 7058 3402 82 13 27 chr2 23347016 23347466 -229909117 - MLT2A1 LTR ERVL 0 444 1 7690 133 25 14 chr2 23347466 23349106 -229907477 - L1MA2 LINE L1 -665 7058 5383 4819 185 19 45 chr2 23349102 23350039 -229906544 - L1MA2 LINE L1 -6575 990 79 * 2648 93 128 2 chr2 23350039 23350437 -229906146 + LTR7 LTR ERV1 1 448 -2 4819 185 19 45 chr2 23350437 23350502 -229906081 - L1MA2 LINE L1 -7486 79 14 341 331 24 8 chr2 23351562 23351686 -229904897 - MIR SINE MIR -60 148 23 430 278 137 50 chr2 23351841 23352140 -229904443 - L2 LINE L2 -1 3312 2988 2675 125 5 8 chr2 23352165 23352541 -229904042 + THE1C LTR MaLR 1 375 0 539 233 43 0 chr2 23352559 23352675 -229903908 + MER45A DNA AcHobo 58 178 0 517 276 192 13 chr2 23352676 23352950 -229903633 - L2 LINE L2 -318 2995 2674 24 53 0 0 chr2 23353463 23353501 -229903082 + AT_rich Low_complexity Low_complexity 1 38 0 823 176 28 0 chr2 23353856 23354019 -229902564 + FRAM SINE Alu 1 166 0 183 342 60 68 chr2 23354029 23354146 -229902437 - MIR SINE MIR -73 135 20 1747 220 151 21 chr2 23354310 23355221 -229901362 + L1MC4 LINE L1 5127 6163 -21 1359 199 81 46 chr2 23356428 23356799 -229899784 + L1MA10 LINE L1 5943 6326 -8 2230 90 21 0 chr2 23356799 23357110 -229899473 - AluY SINE Alu 0 317 1 689 271 96 9 chr2 23357630 23357859 -229898724 - MLT1J2 LTR MaLR 0 450 202 435 221 139 0 chr2 23357889 23358011 -229898572 - MLT1J2 LTR MaLR -307 143 5 1068 176 62 59 chr2 23359125 23359414 -229897169 + MER33 DNA MER1_type 35 324 0 680 236 101 43 chr2 23359415 23359623 -229896960 + MIR SINE MIR 32 251 -11 183 262 66 0 chr2 23361219 23361280 -229895303 + L2 LINE L2 3234 3298 -15 195 100 0 0 chr2 23361368 23361398 -229895185 + (CA)n Simple_repeat Simple_repeat 2 31 0 1204 215 32 3 chr2 23362617 23363050 -229893533 + Charlie4a DNA MER1_type 21 495 -13 2141 112 3 26 chr2 23363249 23363552 -229893031 + AluSx SINE Alu 1 296 -16 254 311 144 20 chr2 23365096 23365418 -229891165 - L2 LINE L2 -202 3070 2712 310 341 95 0 chr2 23365479 23365605 -229890978 - L2 LINE L2 -946 2368 2231 259 279 70 23 chr2 23365705 23365791 -229890792 - MIR3 SINE MIR -7 201 112 22 35 0 0 chr2 23367774 23367803 -229888780 + AT_rich Low_complexity Low_complexity 1 29 0 580 243 25 55 chr2 23368494 23368696 -229887887 + L2 LINE L2 3109 3304 -9 1204 218 35 0 chr2 23368699 23368984 -229887599 + AluJo SINE Alu 1 295 -17 542 280 92 13 chr2 23370253 23370492 -229886091 + MIR SINE MIR 3 260 -2 2529 143 30 39 chr2 23371830 23372298 -229884285 - MLT2C2 LTR ERVL 0 464 1 1529 176 117 6 chr2 23373536 23373860 -229882723 - MER46B DNA MER2_type 0 236 2 293 194 97 65 chr2 23373790 23373883 -229882700 + MER46A DNA MER2_type 75 170 -66 * 848 183 0 33 chr2 23373906 23374086 -229882497 - AluJb SINE Alu -2 310 137 186 287 79 10 chr2 23374372 23374473 -229882110 + L2 LINE L2 3149 3256 -57 556 298 91 27 chr2 23374551 23374771 -229881812 - MIR SINE MIR 0 262 36 519 226 0 0 chr2 23376605 23376764 -229879819 + (TCCA)n Simple_repeat Simple_repeat 2 160 0 496 229 8 0 chr2 23376921 23377039 -229879544 + MIR SINE MIR 79 197 -65 242 246 31 15 chr2 23377041 23377106 -229879477 - MER113 DNA MER1_type? -1 520 455 1946 250 83 37 chr2 23377219 23377871 -229878712 + L1ME3A LINE L1 5208 5908 -262 1298 210 105 9 chr2 23377871 23378204 -229878379 - MLT1A1 LTR MaLR 0 365 1 1946 250 83 37 chr2 23378204 23378383 -229878200 + L1ME3A LINE L1 5908 6077 -93 877 298 28 0 chr2 23378563 23378781 -229877802 - MIR SINE MIR -37 225 2 345 47 0 0 chr2 23380204 23380247 -229876336 + (CA)n Simple_repeat Simple_repeat 2 44 0 206 305 17 0 chr2 23380623 23380682 -229875901 + L2 LINE L2 3207 3266 -6 281 377 82 7 chr2 23382661 23382807 -229873776 - MIR3 SINE MIR -23 185 29 1731 148 80 45 chr2 23382827 23383204 -229873379 + MLT1B LTR MaLR 1 390 0 620 293 6 6 chr2 23383397 23383571 -229873012 - MIR SINE MIR -85 177 4 383 319 12 62 chr2 23383573 23383684 -229872899 + L3 LINE CR1 1425 1527 -50 2237 117 0 0 chr2 23383684 23383993 -229872590 - AluSq SINE Alu -4 309 1 383 319 12 62 chr2 23383993 23384041 -229872542 + L3 LINE CR1 1527 1576 -1 348 24 0 0 chr2 23385440 23385481 -229871102 + (CCA)n Simple_repeat Simple_repeat 2 42 0 361 289 37 15 chr2 23385711 23385846 -229870737 - MIR3 SINE MIR -63 145 8 222 286 47 45 chr2 23386407 23386650 -229869933 + L2 LINE L2 2712 2960 -312 21 0 0 0 chr2 23387273 23387294 -229869289 + AT_rich Low_complexity Low_complexity 1 21 0 209 352 114 0 chr2 23387311 23387416 -229869167 - MIR3 SINE MIR -1 207 91 2155 110 0 25 chr2 23387950 23388268 -229868315 - AluSx SINE Alu -2 310 1 2384 162 24 75 chr2 23388683 23389142 -229867441 + MLT1D LTR MaLR 1 431 -74 3762 81 2 2 chr2 23389142 23389638 -229866945 - L1PA13 LINE L1 -3 6160 5665 2384 162 24 75 chr2 23389638 23389710 -229866873 + MLT1D LTR MaLR 431 505 0 656 261 26 13 chr2 23389710 23389863 -229866720 - MIR SINE MIR -106 156 2 2523 185 69 42 chr2 23390057 23390637 -229865946 + L1MB5 LINE L1 5535 6133 -41 4273 51 2 6 chr2 23390637 23391166 -229865417 + L1PA8 LINE L1 5639 6165 -7 2523 185 69 42 chr2 23391166 23391197 -229865386 + L1MB5 LINE L1 6133 6162 -12 2311 175 8 25 chr2 23391202 23391677 -229864906 - L1MB5 LINE L1 -173 6001 5535 368 0 0 60 chr2 23391690 23391740 -229864843 + L1PA8 LINE L1 6120 6166 -6 23 0 0 0 chr2 23391761 23391784 -229864799 + AT_rich Low_complexity Low_complexity 1 23 0 244 309 12 25 chr2 23391806 23391887 -229864696 - L2 LINE L2 -219 3053 2974 315 343 67 0 chr2 23393286 23393391 -229863192 - MIR SINE MIR -10 252 141 208 253 288 39 chr2 23393385 23393642 -229862941 + L2 LINE L2 1777 2097 -1217 * 471 281 234 5 chr2 23393662 23393854 -229862729 + MIR SINE MIR 10 245 -17 1469 291 103 34 chr2 23393909 23394672 -229861911 + L2 LINE L2 2110 2925 -389 908 196 60 25 chr2 23394686 23394824 -229861759 - Charlie4a DNA MER1_type -1460 501 369 832 138 22 7 chr2 23394824 23394962 -229861621 + L1MC1 LINE L1 6193 6332 -1 908 196 60 25 chr2 23394962 23395128 -229861455 - Charlie4a DNA MER1_type -1592 369 141 187 331 75 50 chr2 23395280 23395440 -229861143 + L2 LINE L2 3078 3241 -72 204 40 0 0 chr2 23395838 23395863 -229860720 + (ATG)n Simple_repeat Simple_repeat 3 27 0 248 242 231 0 chr2 23395875 23395966 -229860617 - MIR SINE MIR -44 218 107 219 222 0 0 chr2 23396442 23396487 -229860096 + (TTAGGG)n Simple_repeat Simple_repeat 3 47 0 378 42 0 0 chr2 23397113 23397161 -229859422 + (A)n Simple_repeat Simple_repeat 1 48 0 1624 130 163 71 chr2 23397451 23397843 -229858740 + MSTA LTR MaLR 1 428 0 260 244 122 57 chr2 23398066 23398189 -229858394 + MIR3 SINE MIR 41 171 -37 420 321 177 18 chr2 23398997 23399274 -229857309 - MLT1J2 LTR MaLR -49 401 81 334 286 10 10 chr2 23399476 23399574 -229857009 + MER8 DNA MER2_type 1 98 -141 567 216 199 85 chr2 23401373 23401771 -229854812 - MLT1J LTR MaLR -54 457 15 321 155 0 0 chr2 23402206 23402264 -229854319 + GA-rich Low_complexity Low_complexity 4 61 0 318 108 215 0 chr2 23404193 23404258 -229852325 - MADE1 DNA Mariner -1 79 1 1846 176 76 58 chr2 23404967 23405416 -229851167 + MLT1C LTR MaLR 3 459 -8 471 35 0 0 chr2 23405601 23405658 -229850925 + (CA)n Simple_repeat Simple_repeat 2 58 0 1977 138 3 0 chr2 23405761 23406052 -229850531 - AluJb SINE Alu -20 292 1 266 284 39 20 chr2 23408643 23408745 -229847838 - MER5B DNA MER1_type -57 121 18 430 214 51 51 chr2 23409496 23409613 -229846970 + MER5B DNA MER1_type 3 119 -59 2215 85 3 3 chr2 23409723 23410016 -229846567 + AluSp SINE Alu 1 293 -20 2193 153 18 10 chr2 23410143 23410530 -229846053 + MLT1B LTR MaLR 1 390 0 31 0 0 0 chr2 23411136 23411167 -229845416 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 23411834 23411856 -229844727 + AT_rich Low_complexity Low_complexity 1 22 0 218 31 0 31 chr2 23412081 23412113 -229844470 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 661 245 80 0 chr2 23412546 23412697 -229843886 + MER96 DNA MER1_type? 12 174 -1 293 314 146 29 chr2 23412857 23413137 -229843446 + L2 LINE L2 2387 2699 -615 * 931 247 6 0 chr2 23413122 23413300 -229843283 + MER5A DNA MER1_type 11 189 0 236 130 0 87 chr2 23414930 23414976 -229841607 + L2 LINE L2 3231 3272 0 202 322 74 33 chr2 23415400 23415521 -229841062 - L2 LINE L2 -467 2847 2722 259 298 114 46 chr2 23415691 23415953 -229840630 - L2 LINE L2 -832 2482 2203 447 335 116 14 chr2 23417126 23417341 -229839242 + L2 LINE L2 3036 3272 0 205 247 82 21 chr2 23418415 23418512 -229838071 + MIR SINE MIR 79 181 -81 451 248 35 64 chr2 23419199 23419401 -229837182 + L1MC5 LINE L1 7698 7893 -68 21 0 0 0 chr2 23419496 23419517 -229837066 + AT_rich Low_complexity Low_complexity 1 21 0 186 237 0 0 chr2 23421646 23421684 -229834899 + L2 LINE L2 3217 3254 -18 308 287 116 53 chr2 23422800 23423463 -229833120 - L1M4 LINE L1 -1556 4590 3886 1249 255 41 11 chr2 23423913 23424282 -229832301 + L1M4 LINE L1 4724 5103 -1043 * 7613 235 61 19 chr2 23424280 23426718 -229829865 - L1M4c LINE L1 -1641 5316 2819 1770 111 15 0 chr2 23426718 23426980 -229829603 - L1MA2 LINE L1 0 6304 6039 7613 235 61 19 chr2 23426980 23427065 -229829518 - L1M4c LINE L1 -4138 2819 2739 328 22 0 0 chr2 23427345 23427390 -229829193 - AluY SINE Alu 0 300 256 6900 232 55 27 chr2 23427485 23429935 -229826648 - L1M4c LINE L1 -4453 2685 9 1838 197 42 3 chr2 23430860 23431195 -229825388 + MER7A DNA MER2_type 1 346 0 439 270 40 16 chr2 23431826 23431952 -229824631 + L2 LINE L2 3180 3308 -5 2291 138 19 50 chr2 23432338 23432714 -229823869 - THE1B LTR MaLR 0 364 1 12083 98 22 5 chr2 23432714 23434267 -229822316 - THE1B-int LTR MaLR 0 1580 1 2360 115 33 36 chr2 23434267 23434632 -229821951 - THE1B LTR MaLR 0 364 1 225 178 0 0 chr2 23434726 23434771 -229821812 + GA-rich Low_complexity Low_complexity 1 45 0 1962 180 44 31 chr2 23434775 23435311 -229821272 + MLT2A2 LTR ERVL 5 554 0 425 188 0 10 chr2 23435318 23435414 -229821169 + GA-rich Low_complexity Low_complexity 3 97 0 21 0 0 0 chr2 23435891 23435912 -229820671 + AT_rich Low_complexity Low_complexity 1 21 0 408 20 0 0 chr2 23435943 23435992 -229820591 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 545 308 43 0 chr2 23437222 23437407 -229819176 - MIR SINE MIR -21 241 49 428 351 53 61 chr2 23438628 23438987 -229817596 - L2 LINE L2 -14 3258 2903 452 275 106 25 chr2 23440209 23440369 -229816214 + MIR SINE MIR 8 180 -82 269 246 18 109 chr2 23440756 23440866 -229815717 - MIR SINE MIR -56 206 107 25 31 0 0 chr2 23443545 23443577 -229813006 + AT_rich Low_complexity Low_complexity 1 32 0 3892 245 41 8 chr2 23444008 23445065 -229811518 - L1M4 LINE L1 -1612 4534 3443 2334 216 55 24 chr2 23445066 23445293 -229811290 + L1M2 LINE L1 1547 1765 -5084 1864 181 0 6 chr2 23445293 23445607 -229810976 + AluJb SINE Alu 1 312 0 2334 216 55 24 chr2 23445607 23446051 -229810532 + L1M2 LINE L1 1765 2239 -4610 363 265 0 10 chr2 23446037 23446132 -229810451 + L1PB4 LINE L1 6054 6149 -7 * 955 68 0 0 chr2 23446132 23446249 -229810334 + L1PA10 LINE L1 6050 6166 -2 5003 226 40 13 chr2 23446271 23447452 -229809131 - L1MCb LINE L1 -4851 1194 3 190 261 87 0 chr2 23447467 23447513 -229809070 + MIR SINE MIR 97 146 -116 964 218 9 28 chr2 23450182 23450398 -229806185 + MIR SINE MIR 41 252 -10 5563 105 13 20 chr2 23453723 23454551 -229802032 - L1PA10 LINE L1 -3 6165 5344 7968 119 13 1 chr2 23454653 23455839 -229800744 - L1PA10 LINE L1 -873 5273 4074 265 326 56 21 chr2 23458640 23458784 -229797799 - L3 LINE CR1 -142 1435 1287 730 159 24 0 chr2 23458858 23458984 -229797599 - LTR40a LTR ERVL 0 519 391 579 329 81 0 chr2 23459307 23459517 -229797066 - MIR SINE MIR 0 262 36 237 360 83 12 chr2 23459875 23460050 -229796533 + MIR SINE MIR 25 211 -51 2340 113 0 3 chr2 23460614 23460924 -229795659 + AluSx SINE Alu 1 309 -3 369 0 0 0 chr2 23460949 23460990 -229795593 + (CA)n Simple_repeat Simple_repeat 2 42 0 192 341 66 0 chr2 23460993 23461084 -229795499 + L3 LINE CR1 846 942 -635 468 331 54 0 chr2 23461305 23461471 -229795112 + L3 LINE CR1 964 1138 -439 1091 224 35 38 chr2 23461493 23461806 -229794777 + LTR40a LTR ERVL 1 312 -207 351 260 188 61 chr2 23461922 23462295 -229794288 + L2 LINE L2 2638 3065 -248 2587 212 39 40 chr2 23462375 23462997 -229793586 - MLT1E3 LTR MaLR 0 624 4 225 228 38 51 chr2 23463016 23463095 -229793488 + L2 LINE L2 3182 3259 -13 2524 60 0 0 chr2 23463320 23463620 -229792963 + AluY SINE Alu 1 300 -11 25 0 0 0 chr2 23463625 23463650 -229792933 + AT_rich Low_complexity Low_complexity 1 25 0 252 59 0 0 chr2 23464969 23465003 -229791580 + (CAT)n Simple_repeat Simple_repeat 3 36 0 355 333 20 20 chr2 23465072 23465222 -229791361 + MIR SINE MIR 1 150 -112 214 383 42 0 chr2 23465684 23465804 -229790779 + MIR3 SINE MIR 35 159 -49 670 226 17 57 chr2 23466254 23466431 -229790152 + MER91B DNA MER1_type 19 188 -2 245 242 0 15 chr2 23467772 23467838 -229788745 + MER5B DNA MER1_type 1 65 -113 21 0 0 0 chr2 23467853 23467874 -229788709 + AT_rich Low_complexity Low_complexity 1 21 0 2292 93 19 0 chr2 23469165 23469475 -229787108 + L1PA10 LINE L1 5851 6166 -2 954 297 68 38 chr2 23470321 23470853 -229785730 + LTR67 LTR ERVL 8 555 -2 296 102 20 0 chr2 23470931 23470980 -229785603 + (CA)n Simple_repeat Simple_repeat 1 50 0 404 320 8 0 chr2 23471050 23471172 -229785411 - L2 LINE L2 0 3313 3191 189 74 0 0 chr2 23471255 23471282 -229785301 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 288 247 72 92 chr2 23472552 23472803 -229783780 + L2 LINE L2 3029 3274 -39 210 293 13 27 chr2 23472843 23472918 -229783665 - L3 LINE CR1 -654 923 850 495 148 12 0 chr2 23472924 23473005 -229783578 - AluSx SINE Alu -14 295 214 1139 136 0 0 chr2 23473006 23473160 -229783423 - AluSx SINE Alu -158 154 1 561 268 37 0 chr2 23476609 23476799 -229779784 + MIR SINE MIR 64 260 -2 275 300 94 47 chr2 23478041 23478338 -229778245 + L1ME4a LINE L1 5604 5914 -207 249 276 11 0 chr2 23478375 23478462 -229778121 + L1ME4a LINE L1 6000 6087 -34 1461 187 154 18 chr2 23478582 23478925 -229777658 - MLT1B LTR MaLR 0 390 1 948 98 11 7 chr2 23479529 23479816 -229776767 + (CA)n Simple_repeat Simple_repeat 1 288 0 664 240 54 36 chr2 23479850 23480071 -229776512 + MIR SINE MIR 37 261 -1 630 307 62 8 chr2 23480389 23480630 -229775953 + L3b LINE CR1 1306 1559 -24 1995 137 139 36 chr2 23481736 23482124 -229774459 - MSTA LTR MaLR 0 428 1 330 26 0 0 chr2 23484748 23484787 -229771796 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 750 212 114 10 chr2 23484928 23485121 -229771462 + LTR16A1 LTR ERVL 245 457 0 196 125 78 0 chr2 23485932 23485996 -229770587 + (CA)n Simple_repeat Simple_repeat 2 70 0 1736 178 10 3 chr2 23486675 23486973 -229769610 - AluJb SINE Alu -12 300 1 872 198 6 0 chr2 23487567 23487724 -229768859 + L1PB4 LINE L1 5968 6125 -31 413 141 28 0 chr2 23487774 23487845 -229768738 + L1PA16 LINE L1 6081 6153 -13 1732 174 27 48 chr2 23487920 23488293 -229768290 - MLT1A1 LTR MaLR 0 365 1 182 290 32 0 chr2 23488304 23488366 -229768217 + L2 LINE L2 3250 3313 0 785 226 39 85 chr2 23489139 23489338 -229767245 - L1ME LINE L1 -5746 324 142 1494 158 4 15 chr2 23489338 23489598 -229766985 - AluJb SINE Alu -55 257 1 785 226 39 85 chr2 23489598 23489704 -229766879 - L1ME LINE L1 -5928 142 33 223 319 22 22 chr2 23489826 23489917 -229766666 - L2 LINE L2 0 3272 3182 931 139 61 113 chr2 23490073 23490383 -229766200 + MER33 DNA MER1_type 31 324 0 1475 231 21 9 chr2 23490391 23490728 -229765855 - MER58B DNA MER1_type 0 341 1 550 286 6 23 chr2 23490861 23491036 -229765547 + MLT1H LTR MaLR 49 220 -329 265 261 65 66 chr2 23491170 23491330 -229765253 + MLT1H LTR MaLR 382 549 0 24 53 0 0 chr2 23491628 23491666 -229764917 + AT_rich Low_complexity Low_complexity 1 38 0 216 333 0 11 chr2 23492332 23492422 -229764161 + MIR3 SINE MIR 116 204 -4 430 317 60 33 chr2 23492954 23493254 -229763329 + L2 LINE L2 2622 2929 -385 324 0 0 0 chr2 23494268 23494304 -229762279 + (A)n Simple_repeat Simple_repeat 1 36 0 541 291 100 33 chr2 23495787 23496058 -229760525 - MER102b DNA MER1_type -3 338 50 236 224 17 0 chr2 23496349 23496407 -229760176 - LTR66 LTR ERVL -154 456 398 404 288 100 17 chr2 23496457 23496697 -229759886 - L2 LINE L2 -761 2553 2294 581 259 41 12 chr2 23498084 23498254 -229758329 + L1MCc LINE L1 26 200 -6223 763 256 66 36 chr2 23498938 23499368 -229757215 + L1MCc LINE L1 1129 1570 -4852 1051 245 109 85 chr2 23499646 23500338 -229756245 + L1MCc LINE L1 1864 2582 -4540 216 0 0 0 chr2 23500338 23500362 -229756221 + (CA)n Simple_repeat Simple_repeat 2 25 0 1051 245 109 85 chr2 23500362 23500518 -229756065 + L1MCc LINE L1 2582 2733 -4389 2327 135 3 6 chr2 23500520 23500882 -229755701 - MER46B DNA MER2_type 0 236 1 3589 269 74 15 chr2 23500957 23502632 -229753951 + L1MCc LINE L1 2747 4464 -2477 779 261 9 18 chr2 23502650 23502876 -229753707 - MIR SINE MIR -36 226 3 189 74 0 0 chr2 23503998 23504025 -229752558 + (TC)n Simple_repeat Simple_repeat 2 28 0 942 267 67 54 chr2 23504174 23504709 -229751874 + MER34 LTR ERV1 1 542 0 341 278 119 0 chr2 23506728 23506854 -229749729 - MIR3 SINE MIR -21 187 47 1025 125 6 6 chr2 23507928 23508088 -229748495 - L1PA10 LINE L1 -11 6157 5998 343 316 15 0 chr2 23508312 23508445 -229748138 + MIR SINE MIR 128 262 0 196 267 13 53 chr2 23508470 23508545 -229748038 + L3 LINE CR1 1340 1411 -166 180 291 102 47 chr2 23508666 23508709 -229747874 + MER5A DNA MER1_type 34 73 -116 2313 97 0 0 chr2 23508709 23508999 -229747584 + AluSc SINE Alu 1 290 -19 180 291 102 47 chr2 23508999 23509082 -229747501 + MER5A DNA MER1_type 73 167 -22 373 302 22 22 chr2 23509235 23509374 -229747209 + MIR SINE MIR 39 177 -85 207 0 0 0 chr2 23510535 23510558 -229746025 + (A)n Simple_repeat Simple_repeat 1 23 0 342 0 0 0 chr2 23510801 23510839 -229745744 + (TA)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 23510838 23510867 -229745716 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 218 284 118 120 chr2 23510924 23511340 -229745243 - L2 LINE L2 -5 3267 2853 243 298 0 0 chr2 23512870 23512954 -229743629 - MIR3 SINE MIR -9 199 116 641 247 123 67 chr2 23513163 23513259 -229743324 - MLT1J2 LTR MaLR 0 428 339 991 215 34 130 chr2 23513259 23513673 -229742910 - MLT1A2 LTR MaLR 0 374 1 641 247 123 67 chr2 23513673 23513943 -229742640 - MLT1J2 LTR MaLR -89 339 67 516 244 262 0 chr2 23514128 23514300 -229742283 + MIR SINE MIR 1 217 -45 962 289 9 33 chr2 23515588 23515920 -229740663 + L1MEc LINE L1 8 331 -6065 1191 207 17 20 chr2 23515921 23516269 -229740314 + L1MEc LINE L1 1969 2315 -4081 * 1655 215 23 5 chr2 23516251 23516641 -229739942 + L1MEc LINE L1 3728 4124 -2091 1453 239 98 0 chr2 23516645 23517013 -229739570 + L1MD2 LINE L1 5952 6355 -4 457 189 31 24 chr2 23516997 23517124 -229739459 + L1MEc LINE L1 2271 2398 -3998 * 798 180 14 0 chr2 23517135 23517274 -229739309 + MER46A DNA MER2_type 22 162 -74 1180 202 11 74 chr2 23517308 23517660 -229738923 + L1MEc LINE L1 2361 2690 -3525 1251 252 47 36 chr2 23517670 23518146 -229738437 + L1ME1 LINE L1 5680 6329 -5 692 174 0 8 chr2 23518494 23518615 -229737968 + L2 LINE L2 3189 3308 -5 2404 152 48 33 chr2 23521488 23521948 -229734635 + MLT1C LTR MaLR 1 467 0 231 297 11 22 chr2 23522144 23522235 -229734348 + MIR SINE MIR 1 90 -172 422 254 219 12 chr2 23522903 23523072 -229733511 + MER63A DNA MER1_type 1 204 -6 289 306 41 0 chr2 23523991 23524089 -229732494 + MIR SINE MIR 43 144 -64 494 270 11 54 chr2 23525134 23525265 -229731318 - MIR SINE MIR -15 247 125 2011 121 30 3 chr2 23525265 23525562 -229731021 + AluSx SINE Alu 1 305 -7 494 270 11 54 chr2 23525562 23525615 -229730968 - MIR SINE MIR -137 125 71 643 271 134 29 chr2 23525617 23525960 -229730623 - MLT1J1 LTR MaLR 0 446 68 185 143 0 0 chr2 23526059 23526087 -229730496 - MIR SINE MIR -195 67 40 2064 242 75 17 chr2 23526580 23527114 -229729469 + MLT1F1 LTR MaLR 1 565 -2 1077 211 5 22 chr2 23527329 23527552 -229729031 + MER20B DNA MER1_type 1 219 0 986 219 149 54 chr2 23527778 23528167 -229728416 - MLT1J2 LTR MaLR -5 445 20 941 214 0 16 chr2 23530078 23530265 -229726318 + MER5A DNA MER1_type 6 189 0 408 344 56 11 chr2 23530382 23530562 -229726021 + MER91A DNA MER1_type 1 188 -8 211 353 0 0 chr2 23531628 23531696 -229724887 + GA-rich Low_complexity Low_complexity 4 71 0 456 297 22 22 chr2 23531916 23532098 -229724485 - MIR SINE MIR -69 193 12 265 220 34 0 chr2 23532325 23532384 -229724199 + L2 LINE L2 3248 3308 -5 220 307 100 14 chr2 23532411 23532551 -229724032 - MIR SINE MIR -15 247 96 1539 219 86 46 chr2 23532776 23533297 -229723286 - MLT1H1 LTR MaLR -13 542 1 546 260 154 45 chr2 23533367 23533908 -229722675 + MLT1G LTR MaLR 17 588 -2 1142 257 133 32 chr2 23534884 23535351 -229721232 + LTR33 LTR ERVL 1 514 -7 2862 9 6 0 chr2 23535799 23536122 -229720461 - L1PA2 LINE L1 0 6155 5831 186 43 0 0 chr2 23536346 23536369 -229720214 + (A)n Simple_repeat Simple_repeat 1 23 0 303 283 50 25 chr2 23538061 23538220 -229718363 + MER103 DNA DNA 1 163 -3 333 0 0 0 chr2 23538427 23538464 -229718119 + (CA)n Simple_repeat Simple_repeat 2 38 0 261 0 0 0 chr2 23538864 23538893 -229717690 + (CA)n Simple_repeat Simple_repeat 2 30 0 434 286 102 39 chr2 23540360 23540990 -229715593 + L1MEd LINE L1 884 1637 -853 205 109 43 0 chr2 23541072 23541118 -229715465 + (TA)n Simple_repeat Simple_repeat 2 49 0 3894 221 123 62 chr2 23541330 23542535 -229714048 + L1MC4 LINE L1 6460 7769 -273 2401 77 3 32 chr2 23542535 23542847 -229713736 - AluY SINE Alu -8 303 1 3894 221 123 62 chr2 23542847 23543077 -229713506 + L1MC4 LINE L1 7769 7983 -59 1632 230 45 15 chr2 23543321 23543790 -229712793 - MER20B DNA MER1_type -11 772 290 1748 232 32 34 chr2 23543792 23544288 -229712295 - MER20B DNA MER1_type -124 659 165 545 303 6 11 chr2 23548499 23548677 -229707906 - MER5B DNA MER1_type 0 178 2 2235 120 52 88 chr2 23550132 23550228 -229706355 + MSTC LTR MaLR 1 99 -329 2099 128 4 0 chr2 23550228 23550509 -229706074 + AluSx SINE Alu 1 282 -30 2235 120 52 88 chr2 23550509 23550853 -229705730 + MSTC LTR MaLR 99 425 -3 419 276 15 15 chr2 23552013 23552147 -229704436 - MER5B DNA MER1_type 0 178 45 2007 126 3 21 chr2 23552218 23552532 -229704051 + AluSx SINE Alu 1 309 0 1737 163 19 26 chr2 23552853 23553166 -229703417 + AluJo SINE Alu 1 311 -1 184 297 62 0 chr2 23553759 23553823 -229702760 + MIR SINE MIR 87 154 -108 326 335 157 12 chr2 23554033 23554352 -229702231 - L2 LINE L2 -5 3308 2944 210 358 58 7 chr2 23554517 23554654 -229701929 + L3 LINE CR1 733 876 -701 416 304 12 31 chr2 23554770 23554931 -229701652 + MER5B DNA MER1_type 21 178 0 1255 222 36 47 chr2 23555112 23555440 -229701143 - L1MEc LINE L1 -3571 2509 2184 2595 66 0 0 chr2 23555440 23555743 -229700840 - AluY SINE Alu -8 303 1 1255 222 36 47 chr2 23555743 23555779 -229700804 - L1MEc LINE L1 -3896 2184 2149 1005 85 8 0 chr2 23555780 23555909 -229700674 - AluY SINE Alu -181 130 1 757 199 9 87 chr2 23555912 23556047 -229700536 - L1MEc LINE L1 -4071 2190 2046 2137 159 81 8 chr2 23556047 23556444 -229700139 - MSTB LTR MaLR 0 426 1 757 199 9 87 chr2 23556444 23556589 -229699994 - L1MEc LINE L1 -4215 2046 1891 270 0 0 0 chr2 23556589 23556619 -229699964 + (TG)n Simple_repeat Simple_repeat 1 30 0 1214 170 58 0 chr2 23556624 23556830 -229699753 + MER20 DNA MER1_type 2 219 0 757 199 9 87 chr2 23556830 23556874 -229699709 - L1MEc LINE L1 -4330 1931 1885 4358 166 59 32 chr2 23556951 23557412 -229699171 - L1MB1 LINE L1 -29 6160 5713 1709 193 7 0 chr2 23557412 23557707 -229698876 + AluJo SINE Alu 1 297 -15 4358 166 59 32 chr2 23557707 23558230 -229698353 - L1MB1 LINE L1 -476 5713 5146 496 250 77 42 chr2 23558232 23558492 -229698091 - L1MEc LINE L1 -4929 1151 883 2944 220 71 24 chr2 23558505 23559099 -229697484 - L1ME1 LINE L1 -6 6160 5507 2283 114 0 16 chr2 23559099 23559414 -229697169 + AluSq SINE Alu 1 310 -3 2944 220 71 24 chr2 23559414 23559750 -229696833 - L1ME1 LINE L1 -659 5507 5188 * 41174 71 6 8 chr2 23559743 23565892 -229690691 - L1PA5 LINE L1 -1 6153 5 763 225 21 34 chr2 23565894 23566130 -229690453 - L1ME1 LINE L1 -944 5202 4970 1967 205 51 102 chr2 23566195 23566493 -229690090 - L1ME1 LINE L1 -1204 4942 4630 300 116 0 0 chr2 23566493 23566536 -229690047 - tRNA-Phe-TTC tRNA tRNA -32 44 2 1967 205 51 102 chr2 23566536 23566966 -229689617 - L1ME1 LINE L1 -1516 4630 4212 1346 227 82 51 chr2 23566958 23567492 -229689091 - L1MEc LINE L1 -5155 915 365 * 1175 145 100 10 chr2 23567492 23567692 -229688891 - MSTA LTR MaLR 0 428 211 2159 178 8 13 chr2 23568395 23568782 -229687801 + MLT1B LTR MaLR 6 390 0 181 391 25 6 chr2 23570949 23571110 -229685473 + L2 LINE L2 2915 3078 -194 1145 185 17 98 chr2 23572266 23572421 -229684162 + MER33 DNA MER1_type 2 115 -2470 2262 136 0 0 chr2 23572421 23572731 -229683852 + AluSx SINE Alu 1 310 -2 1145 185 17 98 chr2 23572731 23572921 -229683662 + MER33 DNA MER1_type 115 319 -5 2020 110 7 7 chr2 23574303 23574615 -229681968 + AluY SINE Alu 1 312 0 1034 131 258 4 chr2 23574704 23574956 -229681627 - Charlie1 DNA MER1_type -136 2625 2310 1874 159 23 7 chr2 23575374 23575682 -229680901 + AluSq SINE Alu 1 313 0 295 132 13 92 chr2 23575770 23575846 -229680737 + L2 LINE L2 3203 3272 0 21 36 0 0 chr2 23575963 23575991 -229680592 + AT_rich Low_complexity Low_complexity 1 28 0 371 224 102 68 chr2 23576858 23577005 -229679578 - MER5A DNA MER1_type -37 152 1 44106 30 23 2 chr2 23578706 23584316 -229672267 + L1P1 LINE L1 2 5731 -424 181 211 19 39 chr2 23589172 23589224 -229667359 - MIR3 SINE MIR -37 171 121 2072 147 0 0 chr2 23589239 23589539 -229667044 + AluJo SINE Alu 2 301 -11 241 250 65 19 chr2 23594687 23594795 -229661788 - L1ME LINE L1 -279 6236 6124 1025 186 0 0 chr2 23594950 23595111 -229661472 + FAM SINE Alu 9 169 -16 2476 83 0 0 chr2 23595116 23595417 -229661166 + AluSg SINE Alu 1 301 -9 7709 246 81 28 chr2 23595670 23597560 -229659023 + L1MEc LINE L1 42 1831 -4384 596 238 4 144 chr2 23597560 23597644 -229658939 + MER58A DNA MER1_type 4 98 -2322 2244 105 10 3 chr2 23597644 23597948 -229658635 + AluSq SINE Alu 1 306 -7 596 238 4 144 chr2 23597948 23598119 -229658464 + MER58A DNA MER1_type 98 223 -1 7709 246 81 28 chr2 23598119 23600599 -229655984 + L1MEc LINE L1 1831 4179 -2036 2352 103 0 0 chr2 23600599 23600899 -229655684 + AluSg SINE Alu 1 300 -10 7709 246 81 28 chr2 23600899 23601320 -229655263 + L1MEc LINE L1 4179 4576 -1639 2133 132 3 0 chr2 23601320 23601623 -229654960 + AluSx SINE Alu 1 304 -8 7709 246 81 28 chr2 23601623 23601823 -229654760 + L1MEc LINE L1 4576 5268 -947 273 308 68 34 chr2 23601981 23602247 -229654336 - L1ME LINE L1 -551 5964 5690 304 254 42 83 chr2 23602277 23602470 -229654113 - L1ME4a LINE L1 -132 5989 5805 207 0 0 0 chr2 23604531 23604554 -229652029 + (CTG)n Simple_repeat Simple_repeat 1 23 0 323 242 95 87 chr2 23604728 23604980 -229651603 + HAL1b LINE L1 80 333 -1015 581 126 61 96 chr2 23655025 23655223 -229601360 - AluY SINE Alu -117 194 4 2742 258 61 28 chr2 23655244 23656644 -229599939 - L1MEc LINE L1 -2739 3801 2395 357 220 19 164 chr2 23656656 23656697 -229599886 - MER58C DNA MER1_type -2207 213 168 2339 104 0 0 chr2 23656697 23656996 -229599587 + AluSc SINE Alu 1 299 -10 357 220 19 164 chr2 23656996 23657168 -229599415 - MER58C DNA MER1_type -2252 168 31 2267 128 13 10 chr2 23657559 23657949 -229598634 - L1PB3 LINE L1 -7 6147 5757 334 217 57 9 chr2 23657963 23658069 -229598514 - L1MEc LINE L1 -4578 1962 1852 1195 188 50 56 chr2 23658189 23658236 -229598347 + MLT1A1 LTR MaLR 49 95 -270 575 52 39 0 chr2 23658236 23658313 -229598270 + MADE1 DNA Mariner 1 80 0 1195 188 50 56 chr2 23658313 23658345 -229598238 + MLT1A1 LTR MaLR 95 126 -239 2184 98 3 17 chr2 23658345 23658668 -229597915 - AluSg SINE Alu 0 310 1 1195 188 50 56 chr2 23658668 23658906 -229597677 + MLT1A1 LTR MaLR 126 365 0 233 236 69 0 chr2 23658908 23658980 -229597603 + MER110 LTR ERV1 415 491 0 235 233 19 19 chr2 23660617 23660720 -229595863 + (CCG)n Simple_repeat Simple_repeat 2 104 0 * 236 231 25 41 chr2 23660672 23660793 -229595790 + (CCCCAG)n Simple_repeat Simple_repeat 6 124 0 189 0 0 0 chr2 23660839 23660860 -229595723 + (CCG)n Simple_repeat Simple_repeat 2 22 0 275 225 14 0 chr2 23660953 23661024 -229595559 + GA-rich Low_complexity Low_complexity 1 72 0 217 206 64 50 chr2 23661137 23661278 -229595305 + (CCGGG)n Simple_repeat Simple_repeat 2 144 0 21 0 0 0 chr2 23661512 23661533 -229595050 + GC_rich Low_complexity Low_complexity 1 21 0 207 156 0 0 chr2 23662424 23662456 -229594127 + (CCG)n Simple_repeat Simple_repeat 3 34 0 22 0 0 0 chr2 23662490 23662512 -229594071 + GC_rich Low_complexity Low_complexity 1 22 0 994 193 24 107 chr2 23663025 23663362 -229593221 + MLT1A1 LTR MaLR 56 364 -1 1709 178 28 6 chr2 23663362 23663722 -229592861 + L1MA7 LINE L1 5923 6290 -1 2399 63 3 0 chr2 23664137 23664421 -229592162 - AluY SINE Alu -14 297 13 445 120 0 13 chr2 23665286 23665361 -229591222 + MER46A DNA MER2_type 97 170 -66 1182 150 5 5 chr2 23666274 23666467 -229590116 - LTR40a LTR ERVL -3 516 324 658 318 17 0 chr2 23667123 23667302 -229589281 - MIR SINE MIR -75 187 6 293 263 88 26 chr2 23667293 23667407 -229589176 + L3 LINE CR1 1298 1418 -159 * 369 0 0 0 chr2 23668832 23668873 -229587710 + (TG)n Simple_repeat Simple_repeat 2 42 0 515 214 183 0 chr2 23669199 23669330 -229587253 - MER5A DNA MER1_type -4 185 31 182 237 85 17 chr2 23670287 23670346 -229586237 - L2 LINE L2 -4 3309 3247 302 246 119 0 chr2 23670703 23670821 -229585762 + MIR SINE MIR 117 248 -14 2087 122 18 33 chr2 23670830 23671165 -229585418 + L1M2 LINE L1 5469 5798 -493 273 119 0 0 chr2 23672551 23672593 -229583990 + (T)n Simple_repeat Simple_repeat 1 42 0 570 153 71 0 chr2 23673185 23673283 -229583300 + AluJb SINE Alu 190 294 -18 273 233 0 0 chr2 23674087 23674177 -229582406 + (TA)n Simple_repeat Simple_repeat 2 91 0 2499 174 54 14 chr2 23674212 23674234 -229582349 - L1MB2 LINE L1 -28 6143 6123 2308 89 0 7 chr2 23674234 23674527 -229582056 - AluSx SINE Alu -11 301 11 2499 174 54 14 chr2 23674527 23675004 -229581579 - L1MB2 LINE L1 -48 6123 5624 2055 111 3 39 chr2 23675015 23675322 -229581261 - AluSp SINE Alu -17 296 1 455 283 90 6 chr2 23675526 23675692 -229580891 + MIR SINE MIR 9 188 -74 493 247 84 26 chr2 23676121 23676311 -229580272 - MIR SINE MIR -41 221 21 684 289 16 43 chr2 23677988 23678292 -229578291 + HAL1b LINE L1 352 647 -701 1659 200 114 47 chr2 23678345 23678794 -229577789 + MLT2B1 LTR ERVL 1 479 -41 1021 168 12 0 chr2 23678832 23678999 -229577584 + MER6B DNA MER2_type 1 169 -41 21 0 0 0 chr2 23679065 23679086 -229577497 + AT_rich Low_complexity Low_complexity 1 21 0 1269 233 128 49 chr2 23679221 23681433 -229575150 - L1ME2 LINE L1 -1 6163 3665 1370 242 132 19 chr2 23681439 23682084 -229574499 - L1ME2 LINE L1 -2954 3192 2475 2960 235 63 24 chr2 23682114 23682649 -229573934 - L1ME1 LINE L1 -5 6230 5718 2169 35 0 8 chr2 23682649 23682905 -229573678 - AluY SINE Alu -57 254 1 2960 235 63 24 chr2 23682905 23684001 -229572582 - L1ME1 LINE L1 -517 5718 4524 296 312 11 0 chr2 23684007 23684100 -229572483 - L1ME1 LINE L1 -2054 4161 4068 * 3122 226 45 45 chr2 23684097 23684224 -229572359 - L1ME1 LINE L1 -2953 3262 3137 808 284 62 0 chr2 23684224 23684435 -229572148 - MER58A DNA MER1_type 0 224 1 3122 226 45 45 chr2 23684435 23685949 -229570634 - L1ME1 LINE L1 -3078 3137 1450 301 329 41 27 chr2 23686385 23686531 -229570052 - L1ME1 LINE L1 -4926 1279 1132 238 226 157 10 chr2 23686560 23686662 -229569921 - L1M3de LINE L1 -4700 1953 1837 809 168 7 0 chr2 23686664 23686819 -229569764 + CT-rich Low_complexity Low_complexity 4 159 0 1639 186 0 20 chr2 23686824 23687120 -229569463 - AluJo SINE Alu -22 290 1 322 334 100 26 chr2 23687120 23687426 -229569157 - L1ME1 LINE L1 -5321 1075 747 475 309 29 56 chr2 23687841 23688181 -229568402 - L1ME1 LINE L1 -5738 467 137 952 265 105 47 chr2 23689162 23689630 -229566953 + LTR33A LTR ERVL 23 517 -6 494 229 46 46 chr2 23689744 23689875 -229566708 - L2 LINE L2 -4 3268 3138 344 271 0 34 chr2 23689926 23690044 -229566539 + MIR SINE MIR 26 139 -123 220 283 57 47 chr2 23690421 23690527 -229566056 + L2 LINE L2 2994 3100 -172 405 70 0 0 chr2 23690541 23690598 -229565985 + (CAT)n Simple_repeat Simple_repeat 1 57 0 330 45 0 0 chr2 23690758 23690802 -229565781 + (TG)n Simple_repeat Simple_repeat 2 45 0 355 325 78 6 chr2 23691373 23691539 -229565044 - MIR3 SINE MIR -1 207 30 2105 112 31 17 chr2 23692653 23692947 -229563636 + AluSx SINE Alu 1 298 -14 603 201 35 114 chr2 23694457 23694746 -229561837 - L1MEc LINE L1 -5135 1261 996 512 323 26 5 chr2 23694761 23694956 -229561627 - MER58C DNA MER1_type 0 215 17 2238 233 79 79 chr2 23694974 23695060 -229561523 - L1MEc LINE L1 -5421 975 890 300 27 0 0 chr2 23695060 23695097 -229561486 + (ATTG)n Simple_repeat Simple_repeat 2 38 0 2238 233 79 79 chr2 23695097 23695964 -229560619 - L1MEc LINE L1 -5505 891 22 1638 109 0 0 chr2 23696145 23696356 -229560227 - AluSg/x SINE Alu -10 300 90 1001 273 93 14 chr2 23697554 23697909 -229558674 - LTR16B LTR ERVL -8 456 74 1315 176 9 45 chr2 23698420 23698687 -229557896 + MLT1A1 LTR MaLR 1 301 -64 2284 112 16 0 chr2 23698687 23698992 -229557591 - AluSx SINE Alu -2 310 1 1315 176 9 45 chr2 23698992 23699055 -229557528 + MLT1A1 LTR MaLR 301 365 0 204 370 0 0 chr2 23699715 23699796 -229556787 - L2 LINE L2 -1 3271 3191 243 203 0 0 chr2 23699900 23699964 -229556619 + A-rich Low_complexity Low_complexity 1 64 0 401 200 0 0 chr2 23700032 23700107 -229556476 - MER45C DNA AcHobo 0 953 879 365 279 19 0 chr2 23700143 23700247 -229556336 - LTR16B LTR ERVL -196 268 163 299 274 14 0 chr2 23700249 23700322 -229556261 - MER45C DNA AcHobo -190 763 690 263 219 62 0 chr2 23700424 23700488 -229556095 - MER45C DNA AcHobo -775 178 111 267 178 0 0 chr2 23700489 23700534 -229556049 + Alu SINE Alu 1 45 -257 446 326 103 49 chr2 23700564 23701352 -229555231 - L2 LINE L2 -211 3061 2220 1371 162 64 24 chr2 23701363 23701659 -229554924 + MLT1C LTR MaLR 1 308 -159 696 245 172 45 chr2 23702650 23703046 -229553537 + MLT1J2 LTR MaLR 5 450 0 2422 81 7 0 chr2 23703921 23704228 -229552355 + AluY SINE Alu 1 309 -2 2317 106 0 6 chr2 23704792 23705103 -229551480 + AluSg SINE Alu 1 309 -1 499 288 23 23 chr2 23705529 23705706 -229550877 + MLT1L LTR MaLR 112 288 -327 331 258 97 32 chr2 23705788 23705943 -229550640 + MLT1L LTR MaLR 445 609 -6 2123 118 14 0 chr2 23706440 23706727 -229549856 + AluSx SINE Alu 1 291 -21 780 290 9 0 chr2 23706738 23706959 -229549624 - MIR SINE MIR 0 262 40 2407 55 0 0 chr2 23707223 23707514 -229549069 + L1P LINE L1 4515 4805 -1341 244 196 0 20 chr2 23707514 23707565 -229549018 + MLT1G1 LTR MaLR 546 595 0 459 0 0 0 chr2 23708840 23708891 -229547692 + (CA)n Simple_repeat Simple_repeat 2 52 0 240 163 0 0 chr2 23709253 23709296 -229547287 + GA-rich Low_complexity Low_complexity 2 44 0 2741 36 0 0 chr2 23710827 23711133 -229545450 - AluY SINE Alu -5 306 1 1683 188 3 20 chr2 23711242 23711540 -229545043 - AluJo SINE Alu -18 294 2 360 246 148 48 chr2 23712400 23712757 -229543826 + L2 LINE L2 2921 3313 0 310 127 67 149 chr2 23713144 23713249 -229543334 + L1ME4a LINE L1 5999 6092 -29 2595 32 0 32 chr2 23713249 23713561 -229543022 - AluY SINE Alu -9 302 1 310 127 67 149 chr2 23713561 23713589 -229542994 + L1ME4a LINE L1 6092 6121 0 331 279 23 0 chr2 23714293 23714379 -229542204 + MIR3 SINE MIR 87 174 -34 204 342 33 8 chr2 23714434 23714554 -229542029 - L2 LINE L2 -158 3114 2992 665 277 21 16 chr2 23714873 23715061 -229541522 + MER5A DNA MER1_type 1 189 0 461 276 109 6 chr2 23715083 23715257 -229541326 + MIR SINE MIR 32 223 -39 25 31 0 0 chr2 23715260 23715292 -229541291 + AT_rich Low_complexity Low_complexity 1 32 0 2386 106 0 3 chr2 23715389 23715701 -229540882 - AluSx SINE Alu -1 311 1 211 394 0 10 chr2 23716110 23716214 -229540369 - MIR SINE MIR -57 151 49 193 362 71 35 chr2 23718448 23718702 -229537881 + L3 LINE CR1 1068 1330 -247 269 225 50 25 chr2 23721182 23721262 -229535321 + MIR SINE MIR 178 259 -3 285 272 141 0 chr2 23721621 23721713 -229534870 + MER5C DNA MER1_type 3 107 -217 2392 107 0 0 chr2 23721722 23722032 -229534551 + AluSg SINE Alu 1 310 0 243 206 0 48 chr2 23722192 23722255 -229534328 + MER5C DNA MER1_type 251 310 -14 4332 155 31 11 chr2 23724016 23724818 -229531765 + L1MB3 LINE L1 5284 6101 -82 599 140 0 0 chr2 23725577 23725677 -229530906 + L1MB3 LINE L1 6083 6182 -1 22 0 0 0 chr2 23725819 23725841 -229530742 + AT_rich Low_complexity Low_complexity 1 22 0 889 277 85 3 chr2 23725863 23726228 -229530355 - L1ME2 LINE L1 -26 6138 5744 1353 197 24 41 chr2 23726804 23727094 -229529489 + AluJo SINE Alu 1 285 -27 315 193 29 14 chr2 23729102 23729242 -229527341 + (TA)n Simple_repeat Simple_repeat 1 142 0 351 0 0 0 chr2 23729982 23730021 -229526562 + (TG)n Simple_repeat Simple_repeat 1 39 0 301 263 27 45 chr2 23731198 23731391 -229525192 - L2 LINE L2 -1 3312 3091 271 260 0 14 chr2 23732080 23732153 -229524430 - L2 LINE L2 -208 3064 2993 2396 104 3 0 chr2 23732302 23732609 -229523974 + AluSx SINE Alu 1 308 -4 267 307 47 40 chr2 23732918 23733068 -229523515 + MIR SINE MIR 66 216 -46 312 190 300 20 chr2 23733108 23733208 -229523375 - L1ME4a LINE L1 -5 6116 5989 250 222 61 20 chr2 23733215 23733314 -229523269 - L1ME4a LINE L1 -179 5942 5840 1470 229 27 27 chr2 23733423 23733790 -229522793 - LTR40a LTR ERVL -152 367 1 818 255 61 9 chr2 23734818 23735030 -229521553 - MIR SINE MIR -6 256 34 181 229 133 60 chr2 23735110 23735193 -229521390 + L2 LINE L2 1395 1483 -1831 22 0 0 0 chr2 23735322 23735344 -229521239 + AT_rich Low_complexity Low_complexity 1 22 0 2161 100 21 7 chr2 23735346 23735637 -229520946 + AluSx SINE Alu 13 307 -5 210 154 0 0 chr2 23736935 23736974 -229519609 + A-rich Low_complexity Low_complexity 1 39 0 415 196 74 16 chr2 23737948 23738078 -229518505 - MLT1I LTR MaLR -3 536 286 185 313 16 16 chr2 23738495 23738559 -229518024 - L3 LINE CR1 -3 1574 1511 402 327 111 0 chr2 23738623 23738840 -229517743 - L3 LINE CR1 -273 1304 1064 823 318 92 16 chr2 23738930 23739376 -229517207 - L2 LINE L2 0 3313 2834 224 329 13 0 chr2 23739539 23739615 -229516968 - L3 LINE CR1 -737 840 764 1755 184 27 3 chr2 23740967 23741298 -229515285 - MER44D DNA MER2_type 0 609 1 1536 192 22 11 chr2 23741335 23741606 -229514977 + AluJb SINE Alu 20 293 -19 236 214 294 46 chr2 23742301 23742457 -229514126 - MIR SINE MIR -33 175 18 204 179 0 0 chr2 23744828 23744867 -229511716 + GA-rich Low_complexity Low_complexity 4 42 0 1863 151 46 27 chr2 23744985 23745050 -229511533 - L1MB8 LINE L1 -2 6176 6114 2283 109 3 0 chr2 23745050 23745353 -229511230 + AluSp SINE Alu 1 304 -9 1863 151 46 27 chr2 23745353 23745658 -229510925 - L1MB8 LINE L1 -64 6114 5799 597 112 0 0 chr2 23745674 23745763 -229510820 - AluSc SINE Alu -6 303 215 413 142 36 24 chr2 23745765 23745885 -229510698 - L1MB8 LINE L1 -399 5779 5659 1322 84 0 24 chr2 23745977 23746144 -229510439 - AluSc SINE Alu -77 232 70 1050 357 88 23 chr2 23746144 23747152 -229509431 - L2 LINE L2 -65 3248 2174 339 308 61 57 chr2 23747410 23747689 -229508894 - L2 LINE L2 -179 3134 2855 269 159 0 0 chr2 23747906 23747950 -229508633 + Alu SINE Alu 246 289 -13 23 33 0 0 chr2 23748120 23748150 -229508433 + AT_rich Low_complexity Low_complexity 1 30 0 2402 109 0 3 chr2 23748228 23748539 -229508044 + AluSg SINE Alu 1 310 0 189 121 0 0 chr2 23748573 23748606 -229507977 + (CAT)n Simple_repeat Simple_repeat 3 35 0 410 339 27 43 chr2 23750061 23750318 -229506265 + L1M4 LINE L1 3169 3421 -2725 2412 43 40 7 chr2 23750318 23750618 -229505965 + AluY SINE Alu 1 310 -1 887 160 0 0 chr2 23750670 23750801 -229505782 - FLAM_C SINE Alu -10 133 3 1099 271 136 14 chr2 23750827 23751328 -229505255 + L1ME3A LINE L1 5587 6148 -22 1953 131 7 0 chr2 23751361 23751687 -229504896 + AluSx SINE Alu 1 328 0 532 200 59 0 chr2 23752695 23752830 -229503753 + L1MB7 LINE L1 6042 6184 0 197 298 107 46 chr2 23753230 23753361 -229503222 + L2 LINE L2 3104 3242 -30 185 283 22 0 chr2 23753376 23753422 -229503161 + L2 LINE L2 3214 3260 -12 180 77 0 0 chr2 23753806 23753832 -229502751 + (CAGCC)n Simple_repeat Simple_repeat 3 28 0 466 289 100 28 chr2 23754483 23754663 -229501920 + MIR SINE MIR 1 193 -69 1964 194 94 26 chr2 23754684 23755152 -229501431 + MLT1D LTR MaLR 1 500 -5 1055 336 139 49 chr2 23755236 23756656 -229499927 - L3 LINE CR1 -28 1549 2 193 250 0 88 chr2 23756832 23756900 -229499683 + MER5A DNA MER1_type 30 91 -98 822 263 93 35 chr2 23756915 23757291 -229499292 - MLT1J1 LTR MaLR -2 444 47 244 121 152 0 chr2 23757307 23757371 -229499212 - MLT1J1 LTR MaLR -352 94 21 236 316 127 0 chr2 23757388 23757467 -229499116 - MER5A DNA MER1_type -100 89 1 438 303 83 78 chr2 23757545 23757931 -229498652 + L2 LINE L2 2864 3251 -21 453 223 39 0 chr2 23758399 23758502 -229498081 + MLT1F1 LTR MaLR 1 107 -435 1218 218 35 22 chr2 23758521 23758862 -229497721 + MLT1F1 LTR MaLR 224 567 0 33 80 0 0 chr2 23759074 23759149 -229497434 + AT_rich Low_complexity Low_complexity 1 75 0 1902 144 34 0 chr2 23759421 23759713 -229496870 + AluSx SINE Alu 2 303 -9 201 39 0 0 chr2 23761098 23761124 -229495459 + (G)n Simple_repeat Simple_repeat 1 26 0 2038 125 7 17 chr2 23761620 23761916 -229494667 + AluSx SINE Alu 1 293 -19 230 186 17 34 chr2 23762898 23762957 -229493626 + L2 LINE L2 3212 3269 -3 185 286 0 0 chr2 23763057 23763106 -229493477 + L2 LINE L2 3263 3311 -2 525 249 157 40 chr2 23763526 23763741 -229492842 + MIR SINE MIR 10 251 -11 22 0 0 0 chr2 23765479 23765501 -229491082 + AT_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr2 23766548 23766603 -229489980 + GC_rich Low_complexity Low_complexity 1 55 0 321 131 0 0 chr2 23768008 23768069 -229488514 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 329 311 149 6 chr2 23768939 23769100 -229487483 - MIR3 SINE MIR -6 202 19 189 327 44 26 chr2 23769918 23770031 -229486552 + L2 LINE L2 3142 3256 -16 201 94 0 0 chr2 23771584 23771616 -229484967 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 269 208 15 154 chr2 23772834 23772964 -229483619 + MER103 DNA DNA 3 114 -52 282 339 123 0 chr2 23773235 23773365 -229483218 + L2 LINE L2 3127 3272 0 1855 251 101 15 chr2 23774221 23774835 -229481748 + HsTC2a DNA Tc2 78 744 0 437 322 33 115 chr2 23778576 23779001 -229477582 + L2 LINE L2 2881 3270 -2 242 253 23 58 chr2 23779129 23779216 -229477367 + L2 LINE L2 3004 3087 -185 201 335 90 48 chr2 23779762 23779929 -229476654 + L2 LINE L2 3083 3256 -16 204 158 0 0 chr2 23779967 23780005 -229476578 + A-rich Low_complexity Low_complexity 3 40 0 2260 140 60 3 chr2 23781213 23781577 -229475006 - MLT1B LTR MaLR 0 390 6 225 303 99 46 chr2 23781939 23782091 -229474492 + MIR SINE MIR 95 254 -8 417 330 115 10 chr2 23782628 23782837 -229473746 - MIR SINE MIR -1 261 31 872 258 99 40 chr2 23782926 23783228 -229473355 + L1ME3 LINE L1 5795 6114 -48 205 379 66 71 chr2 23785168 23785606 -229470977 - L2 LINE L2 0 3272 2837 408 167 18 53 chr2 23786114 23786228 -229470355 + Charlie7 DNA MER1_type 28 137 -2475 227 277 174 40 chr2 23786351 23786575 -229470008 + L1MEc LINE L1 1454 1707 -4689 431 259 28 52 chr2 23787095 23787307 -229469276 + L1MEc LINE L1 2525 2731 -3484 2157 115 86 9 chr2 23787419 23787757 -229468826 - THE1B LTR MaLR 0 364 1 215 325 113 25 chr2 23788160 23788240 -229468343 + L2 LINE L2 3169 3255 -17 2056 175 16 10 chr2 23789728 23790116 -229466467 + MLT1B LTR MaLR 1 390 0 201 229 148 0 chr2 23790879 23790940 -229465643 - MIR SINE MIR -24 238 169 837 271 48 31 chr2 23790949 23791148 -229465435 + L1ME3A LINE L1 5418 5625 -545 2687 80 16 16 chr2 23791148 23791523 -229465060 - THE1C LTR MaLR 0 375 1 837 271 48 31 chr2 23791523 23791615 -229464968 + L1ME3A LINE L1 5625 5714 -456 1228 217 41 52 chr2 23791637 23792001 -229464582 + L1ME3A LINE L1 5811 6170 0 247 329 200 0 chr2 23792005 23792145 -229464438 - MIR SINE MIR -89 173 6 193 309 181 0 chr2 23792879 23792973 -229463610 + MIR SINE MIR 152 262 0 485 240 147 69 chr2 23794487 23794833 -229461750 - HAL1 LINE L1 -2 2505 2133 391 304 60 71 chr2 23794911 23795279 -229461304 - HAL1 LINE L1 -2125 382 19 685 265 49 7 chr2 23795612 23795897 -229460686 + HERVL LTR ERVL 1711 1853 -3143 450 343 26 46 chr2 23795889 23796088 -229460495 + HERVL LTR ERVL 3173 3374 -2280 * 2147 93 3 0 chr2 23796088 23796378 -229460205 + AluSc SINE Alu 1 291 -18 450 343 26 46 chr2 23796378 23796639 -229459944 + HERVL LTR ERVL 3374 3624 -2030 457 299 182 23 chr2 23797564 23797949 -229458634 + MLT1J2 LTR MaLR 5 450 0 573 281 155 47 chr2 23799879 23800311 -229456272 + MLT1J2 LTR MaLR 1 450 0 1299 223 81 17 chr2 23801142 23801488 -229455095 + MER110A LTR ERV1 69 436 -32 282 178 0 0 chr2 23801487 23801532 -229455051 + MLT1A2 LTR MaLR 5 49 -325 * 201 350 69 17 chr2 23802766 23803057 -229453526 - L2 LINE L2 -1020 2294 1989 182 278 74 0 chr2 23805207 23805261 -229451322 + L2 LINE L2 3209 3266 -6 224 353 30 0 chr2 23805319 23805452 -229451131 + L2 LINE L2 2637 2773 -541 710 262 21 5 chr2 23805872 23806063 -229450520 + MIR SINE MIR 29 222 -40 668 204 0 30 chr2 23806102 23806234 -229450349 + AluJb SINE Alu 165 292 -20 234 0 0 0 chr2 23806243 23806269 -229450314 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 402 115 0 0 chr2 23806288 23806349 -229450234 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 858 83 0 0 chr2 23806451 23806571 -229450012 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 242 357 51 0 chr2 23806577 23806675 -229449908 - MIR SINE MIR -71 137 35 2072 134 0 3 chr2 23807995 23808308 -229448275 + AluSx SINE Alu 1 312 0 284 218 0 103 chr2 23812260 23812347 -229444236 + L2 LINE L2 3193 3270 -2 473 239 92 37 chr2 23812400 23812563 -229444020 - MLT1J2 LTR MaLR 0 450 279 198 0 0 0 chr2 23813330 23813352 -229443231 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 236 279 29 0 chr2 23813992 23814060 -229442523 - L1ME LINE L1 -437 5684 5615 238 226 75 19 chr2 23814110 23814216 -229442367 - L1ME LINE L1 -682 5482 5371 545 338 86 31 chr2 23814223 23814679 -229441904 - L1ME LINE L1 -813 5333 4853 703 99 54 9 chr2 23814693 23814826 -229441757 - AluSp/q SINE Alu 0 313 174 633 284 61 124 chr2 23814856 23815445 -229441138 - L1ME LINE L1 -1316 4830 4279 555 330 133 39 chr2 23816431 23817392 -229439191 - L2 LINE L2 0 3272 2215 306 202 83 60 chr2 23817838 23817922 -229438661 - L2 LINE L2 -2 3270 3185 414 0 0 0 chr2 23818168 23818214 -229438369 + (TG)n Simple_repeat Simple_repeat 1 46 0 502 266 90 17 chr2 23820845 23821022 -229435561 + L3b LINE CR1 1152 1341 -242 848 228 35 5 chr2 23821652 23821854 -229434729 - LTR67 LTR ERVL -2 555 348 258 315 14 0 chr2 23822328 23822401 -229434182 + MIR SINE MIR 20 93 -169 1079 186 0 16 chr2 23822488 23822676 -229433907 - AluJb SINE Alu -13 299 115 183 244 0 24 chr2 23823187 23823228 -229433355 + MIR SINE MIR 112 151 -111 * 268 187 40 80 chr2 23823214 23823289 -229433294 - MIR SINE MIR -95 113 42 305 321 108 35 chr2 23823625 23824058 -229432525 + L2 LINE L2 2227 2691 -623 390 379 11 6 chr2 23824283 23824457 -229432126 - MIR SINE MIR -75 187 13 578 247 100 24 chr2 23824730 23824900 -229431683 + L2 LINE L2 3090 3272 0 389 293 110 30 chr2 23825493 23825657 -229430926 + MIR SINE MIR 79 255 -7 191 300 25 12 chr2 23826678 23826758 -229429825 + MIR SINE MIR 59 139 -69 393 281 22 43 chr2 23827763 23827902 -229428681 - MIR SINE MIR -35 227 92 591 173 11 6 chr2 23828313 23828492 -229428091 + (TG)n Simple_repeat Simple_repeat 1 180 0 332 215 9 0 chr2 23828505 23828612 -229427971 + (TG)n Simple_repeat Simple_repeat 2 109 0 250 229 5 5 chr2 23828638 23828865 -229427718 + (TG)n Simple_repeat Simple_repeat 1 227 0 447 196 11 6 chr2 23828879 23829058 -229427525 + (TG)n Simple_repeat Simple_repeat 1 180 0 388 195 29 0 chr2 23829123 23829297 -229427286 + (TG)n Simple_repeat Simple_repeat 2 180 0 422 193 23 0 chr2 23829309 23829480 -229427103 + (TG)n Simple_repeat Simple_repeat 2 176 0 299 132 15 0 chr2 23829525 23829593 -229426990 + (TG)n Simple_repeat Simple_repeat 1 69 0 17407 28 1 1 chr2 23831191 23833363 -229423220 - L1P LINE L1 -1658 4488 2315 7671 30 0 0 chr2 23833363 23834722 -229421861 + L1PA3 LINE L1 4811 6169 0 1150 225 103 48 chr2 23834740 23835139 -229421444 - MLT1G1 LTR MaLR -37 558 95 2516 185 18 35 chr2 23835139 23835311 -229421272 + MLT1D LTR MaLR 1 174 -331 1623 168 34 30 chr2 23835311 23835608 -229420975 - AluJb SINE Alu -14 298 1 2516 185 18 35 chr2 23835608 23835949 -229420634 + MLT1D LTR MaLR 174 505 0 1150 225 103 48 chr2 23835949 23836025 -229420558 - MLT1G1 LTR MaLR -500 95 25 1404 272 56 82 chr2 23836284 23837248 -229419335 - L1MC4 LINE L1 0 8042 7104 2270 277 129 42 chr2 23837256 23837550 -229419033 - L1MC4a LINE L1 -975 6833 6566 2141 100 24 7 chr2 23837550 23837840 -229418743 - AluSq SINE Alu -17 296 2 2270 277 129 42 chr2 23837840 23838180 -229418403 - L1MC4a LINE L1 -1242 6566 6257 1116 156 40 10 chr2 23838180 23838379 -229418204 - MER6B DNA MER2_type -1 209 5 2270 277 129 42 chr2 23838379 23839195 -229417388 - L1MC4a LINE L1 -1551 6257 5255 434 318 118 47 chr2 23839201 23839582 -229417001 - L1MC4a LINE L1 -944 5202 4795 884 221 99 1 chr2 23840893 23841175 -229415408 + MER46C DNA MER2_type 2 338 0 490 287 45 6 chr2 23841482 23841639 -229414944 - MIR SINE MIR 0 262 100 228 254 94 14 chr2 23841664 23841802 -229414781 - LTR67 LTR ERVL -29 528 380 204 309 75 21 chr2 23842226 23842320 -229414263 - MIR SINE MIR -87 121 23 638 269 138 24 chr2 23842557 23842847 -229413736 - MLT1H LTR MaLR -16 533 211 1331 156 3 122 chr2 23843944 23844316 -229412267 - L1MB8 LINE L1 -6 6172 5844 600 240 73 82 chr2 23844319 23844552 -229412031 + MIR SINE MIR 31 261 -1 1276 135 50 0 chr2 23845000 23845222 -229411361 - MSTB LTR MaLR 0 426 194 1384 220 3 33 chr2 23845225 23845529 -229411054 - AluJo SINE Alu -12 300 6 998 138 46 0 chr2 23845537 23845711 -229410872 - MSTB LTR MaLR -244 182 1 221 373 15 0 chr2 23846228 23846295 -229410288 + L2 LINE L2 3123 3190 -82 23 54 0 0 chr2 23846318 23846355 -229410228 + AT_rich Low_complexity Low_complexity 1 37 0 233 340 47 19 chr2 23848019 23848125 -229408458 - L2 LINE L2 -5 3308 3200 1073 80 0 0 chr2 23848818 23848955 -229407628 - AluSg/x SINE Alu -6 306 170 2004 151 84 35 chr2 23849008 23849379 -229407204 + MLT1B LTR MaLR 2 390 0 2609 68 0 0 chr2 23850941 23851250 -229405333 + AluY SINE Alu 1 309 -2 1262 291 148 55 chr2 23851429 23851496 -229405087 - L2 LINE L2 -2 3311 3252 889 195 133 0 chr2 23851496 23851691 -229404892 - MER58A DNA MER1_type -3 221 1 1262 291 148 55 chr2 23851691 23852822 -229403761 - L2 LINE L2 -61 3252 1990 662 239 116 61 chr2 23852966 23853259 -229403324 - L2 LINE L2 -1324 1990 1682 336 336 35 17 chr2 23853402 23853518 -229403065 - L2 LINE L2 -1 3271 3154 807 149 29 120 chr2 23853529 23853737 -229402846 + MER20 DNA MER1_type 1 189 -30 234 337 102 10 chr2 23854177 23854275 -229402308 - L2 LINE L2 -528 2786 2680 768 306 37 0 chr2 23854287 23854503 -229402080 - MIR SINE MIR 0 262 39 488 71 12 60 chr2 23855151 23855235 -229401348 + MADE1 DNA Mariner 1 80 0 352 161 12 49 chr2 23855744 23855825 -229400758 + MIR3 SINE MIR 111 188 -20 1008 129 0 0 chr2 23856064 23856204 -229400379 + FLAM_C SINE Alu 3 142 -1 695 252 110 13 chr2 23857504 23857822 -229398761 + LTR16C LTR ERVL 120 468 -23 871 279 68 6 chr2 23858610 23858932 -229397651 + LTR16C LTR ERVL 150 491 0 345 280 40 16 chr2 23860150 23860275 -229396308 + MIR3 SINE MIR 10 137 -71 409 319 49 58 chr2 23861263 23861489 -229395094 - MIR SINE MIR -30 232 9 194 148 0 0 chr2 23862946 23862973 -229393610 - L2 LINE L2 -20 3252 3226 463 313 20 22 chr2 23863565 23863763 -229392820 + MIR SINE MIR 3 198 -62 2061 97 0 4 chr2 23865585 23865868 -229390715 + AluSc SINE Alu 23 304 0 578 138 0 0 chr2 23865869 23865978 -229390605 - L1PA12 LINE L1 -4449 3135 3019 328 320 39 10 chr2 23865980 23866083 -229390500 - MIR SINE MIR -141 121 16 755 244 107 90 chr2 23866094 23866606 -229389977 - LTR33 LTR ERVL 0 521 1 1184 231 126 38 chr2 23866969 23867471 -229389112 + L2 LINE L2 2780 3301 -12 189 0 0 0 chr2 23867472 23867493 -229389090 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 27 29 0 0 chr2 23868202 23868236 -229388347 + AT_rich Low_complexity Low_complexity 1 34 0 201 74 0 0 chr2 23868693 23868720 -229387863 + (A)n Simple_repeat Simple_repeat 1 27 0 1552 163 20 0 chr2 23869128 23869380 -229387203 - AluSx SINE Alu -51 261 5 473 327 125 9 chr2 23869540 23869965 -229386618 - L1ME4a LINE L1 -11 6110 5637 191 324 39 56 chr2 23872785 23872964 -229383619 + L2 LINE L2 2232 2407 -907 339 208 160 24 chr2 23873165 23873290 -229383293 + MIR3 SINE MIR 4 145 -63 186 246 154 108 chr2 23873358 23873416 -229383167 + MER5B DNA MER1_type 1 55 -123 2208 113 0 10 chr2 23873416 23873718 -229382865 + AluSx SINE Alu 3 301 -11 186 246 154 108 chr2 23873718 23873789 -229382794 + MER5B DNA MER1_type 55 136 -42 720 224 16 44 chr2 23874253 23874436 -229382147 + MER5B DNA MER1_type 1 178 0 1905 128 45 3 chr2 23874843 23875133 -229381450 + AluSx SINE Alu 1 302 -10 201 279 0 0 chr2 23875686 23875729 -229380854 + MER91 DNA MER1_type 122 164 -26 426 39 0 0 chr2 23876032 23876084 -229380499 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 226 267 89 11 chr2 23876107 23876197 -229380386 - L2 LINE L2 -47 3225 3129 369 280 72 16 chr2 23876287 23876412 -229380171 - L2 LINE L2 0 3313 3182 456 276 14 60 chr2 23876898 23877047 -229379536 - MIR SINE MIR -60 148 32 259 237 175 26 chr2 23878440 23878554 -229378029 + L2 LINE L2 3142 3272 0 839 241 63 5 chr2 23878907 23879114 -229377469 + MIR SINE MIR 13 231 -31 311 313 0 30 chr2 23879573 23879704 -229376879 + MIR3 SINE MIR 60 186 -22 558 341 45 5 chr2 23880103 23880323 -229376260 - MIR SINE MIR -19 243 15 193 175 25 0 chr2 23882003 23882043 -229374540 - MER5B DNA MER1_type 0 178 138 634 228 102 0 chr2 23882537 23882704 -229373879 - L3b LINE CR1 -117 1466 1283 1435 108 0 0 chr2 23884166 23884360 -229372223 - L1PA8 LINE L1 -4 6168 5975 362 275 44 93 chr2 23886106 23886288 -229370295 + MIR3 SINE MIR 18 190 -18 456 175 0 0 chr2 23886842 23886939 -229369644 + (TG)n Simple_repeat Simple_repeat 1 97 0 583 237 0 30 chr2 23888261 23888396 -229368187 - FLAM_C SINE Alu -1 132 2 766 201 35 0 chr2 23891190 23891364 -229365219 - L1MA9 LINE L1 -47 6265 6086 643 204 162 0 chr2 23891859 23892026 -229364557 + MER3 DNA MER1_type 15 208 -1 248 222 19 0 chr2 23891985 23892039 -229364544 - MER3 DNA MER1_type -119 90 36 * 242 302 104 0 chr2 23893232 23893328 -229363255 - L2 LINE L2 -15 3298 3193 695 250 17 56 chr2 23894949 23895181 -229361402 - L1ME2 LINE L1 -16 6148 5926 463 253 55 7 chr2 23896451 23896597 -229359986 + MIR3 SINE MIR 56 208 0 29 28 0 0 chr2 23897415 23897451 -229359132 + AT_rich Low_complexity Low_complexity 1 36 0 459 254 56 7 chr2 23900953 23901095 -229355488 + MIR3 SINE MIR 60 208 0 880 229 147 7 chr2 23901373 23901814 -229354769 - MLT1G LTR MaLR 0 530 32 786 214 46 25 chr2 23902083 23902279 -229354304 + MIR SINE MIR 21 220 -42 838 154 0 14 chr2 23904190 23904333 -229352250 - MLT1B LTR MaLR 0 390 250 270 285 86 93 chr2 23904334 23904485 -229352098 + MER5A DNA MER1_type 27 176 -13 588 250 45 60 chr2 23905286 23905373 -229351210 + MIR SINE MIR 64 151 -111 2185 104 3 0 chr2 23905373 23905670 -229350913 + AluSp SINE Alu 1 298 -15 588 250 45 60 chr2 23905670 23905782 -229350801 + MIR SINE MIR 151 260 -2 249 323 38 8 chr2 23908129 23908262 -229348321 + L2 LINE L2 2369 2505 -809 197 277 46 0 chr2 23908235 23908300 -229348283 + L2 LINE L2 3205 3272 0 * 373 278 145 61 chr2 23908492 23908884 -229347699 + L2 LINE L2 2830 3254 -18 2189 86 0 10 chr2 23910472 23910773 -229345810 + AluSc SINE Alu 1 298 -11 297 257 48 38 chr2 23911148 23911253 -229345330 + MIR SINE MIR 92 197 -65 1758 120 16 72 chr2 23912780 23913148 -229343435 - MER4A LTR ERV1 0 664 259 444 165 87 9 chr2 23913161 23913276 -229343307 - MER4A LTR ERV1 -539 125 2 262 325 127 25 chr2 23914829 23915026 -229341557 - MIR SINE MIR -36 226 10 2133 114 3 7 chr2 23915361 23915659 -229340924 - AluSx SINE Alu -15 297 1 259 254 0 15 chr2 23916869 23916936 -229339647 - L2 LINE L2 -2 3311 3246 235 340 61 36 chr2 23917289 23917461 -229339122 - MIR SINE MIR -63 145 16 812 193 18 94 chr2 23919919 23920142 -229336441 - MER63A DNA MER1_type -4 206 1 213 286 39 0 chr2 23920925 23921002 -229335581 - MIR SINE MIR -61 147 68 1754 144 0 24 chr2 23922326 23922624 -229333959 - AluJo SINE Alu -21 291 1 236 284 70 0 chr2 23923281 23923375 -229333208 - MIR SINE MIR -61 147 53 218 314 0 97 chr2 23927466 23927590 -229328993 + MIR SINE MIR 150 261 -1 180 346 23 54 chr2 23927590 23927720 -229328863 + L2 LINE L2 2924 3049 -223 810 184 10 7 chr2 23928165 23928331 -229328252 + L1ME2 LINE L1 6012 6183 -1 2989 132 18 25 chr2 23928635 23929150 -229327433 + L1MB3 LINE L1 5673 6183 0 261 0 0 0 chr2 23930100 23930129 -229326454 + (CA)n Simple_repeat Simple_repeat 1 29 0 342 80 0 0 chr2 23930129 23930179 -229326404 + (TC)n Simple_repeat Simple_repeat 1 50 0 465 50 0 0 chr2 23930627 23930687 -229325896 + (CA)n Simple_repeat Simple_repeat 2 61 0 336 351 60 12 chr2 23931238 23931406 -229325177 - MIR3 SINE MIR -15 193 18 299 161 145 0 chr2 23931453 23931515 -229325068 - MER5A DNA MER1_type -115 74 4 1951 149 3 3 chr2 23932642 23932951 -229323632 - AluJb SINE Alu -3 309 1 926 183 76 15 chr2 23933458 23933655 -229322928 - MER3 DNA MER1_type 0 209 1 885 276 141 42 chr2 23933812 23934309 -229322274 - MLT1K LTR MaLR -10 578 33 321 172 0 0 chr2 23934447 23934511 -229322072 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 329 294 18 55 chr2 23936093 23936161 -229320422 + MIR SINE MIR 81 150 -112 408 237 168 67 chr2 23936161 23936566 -229320017 - MLT1J1 LTR MaLR 0 446 1 329 294 18 55 chr2 23936566 23936660 -229319923 + MIR SINE MIR 150 237 -25 215 309 62 0 chr2 23937441 23937522 -229319061 - L2 LINE L2 -5 3308 3223 781 235 11 16 chr2 23937533 23937716 -229318867 + MIR SINE MIR 12 193 -69 1062 256 97 4 chr2 23937731 23938338 -229318245 - L2 LINE L2 -97 3216 2546 299 326 39 8 chr2 23938451 23938580 -229318003 + MIR3 SINE MIR 15 147 -61 340 317 149 6 chr2 23940620 23940781 -229315802 + MIR SINE MIR 69 252 -10 242 229 0 0 chr2 23940789 23940837 -229315746 + (TAG)n Simple_repeat Simple_repeat 3 50 0 191 205 0 0 chr2 23941080 23941119 -229315464 - L2 LINE L2 -207 3065 3027 639 169 0 0 chr2 23941462 23941610 -229314973 + (CA)n Simple_repeat Simple_repeat 2 149 0 1005 263 104 61 chr2 23941626 23942002 -229314581 + MLT1I LTR MaLR 18 409 0 31 0 0 0 chr2 23942670 23942701 -229313882 + AT_rich Low_complexity Low_complexity 1 31 0 220 224 282 12 chr2 23944996 23945081 -229311502 + MER5A DNA MER1_type 55 162 -27 * 527 194 0 0 chr2 23945010 23945114 -229311469 - MER5A DNA MER1_type -80 109 6 408 304 0 48 chr2 23945254 23945422 -229311161 - L1MB1 LINE L1 -25 6164 6005 696 206 0 86 chr2 23945424 23945633 -229310950 + L1MA10 LINE L1 6144 6334 0 2278 98 3 0 chr2 23945962 23946269 -229310314 - AluSx SINE Alu -4 308 1 328 223 252 0 chr2 23946804 23946943 -229309640 - MER96 DNA MER1_type? -1 174 1 1893 133 3 47 chr2 23949566 23949883 -229306700 + AluSx SINE Alu 1 303 -9 330 256 0 0 chr2 23951057 23951135 -229305448 - MLT1I LTR MaLR -3 406 329 456 275 85 56 chr2 23951193 23951429 -229305154 - MLT1J2 LTR MaLR -170 239 1 2008 117 23 7 chr2 23951612 23951911 -229304672 - AluSx SINE Alu -6 306 3 306 298 48 0 chr2 23952065 23952169 -229304414 - L2 LINE L2 0 3313 3205 186 43 0 0 chr2 23952642 23952665 -229303918 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 745 329 110 23 chr2 23952793 23953410 -229303173 - L2 LINE L2 -882 2432 1762 2155 125 0 0 chr2 23953473 23953778 -229302805 - AluSc SINE Alu -4 305 1 317 273 182 23 chr2 23955122 23955254 -229301329 + MIR SINE MIR 45 197 -65 373 302 0 9 chr2 23956149 23956255 -229300328 - MIR SINE MIR -57 205 101 246 231 0 0 chr2 23956677 23956742 -229299841 + (TG)n Simple_repeat Simple_repeat 2 66 0 788 234 49 35 chr2 23958102 23958328 -229298255 + MIR SINE MIR 7 235 -27 926 119 0 8 chr2 23958439 23958573 -229298010 - AluSq/x SINE Alu -180 133 1 335 311 66 0 chr2 23959503 23959654 -229296929 - MIR3 SINE MIR -23 185 25 701 271 89 22 chr2 23959838 23960063 -229296520 + MIR SINE MIR 17 256 -6 1258 266 85 31 chr2 23961476 23961992 -229294591 - MLT1H LTR MaLR 0 549 6 903 289 147 16 chr2 23964573 23965057 -229291526 + MLT1L LTR MaLR 1 547 -68 262 320 47 29 chr2 23965395 23965567 -229291016 + L2 LINE L2 2863 3037 -235 26 30 0 0 chr2 23965775 23965808 -229290775 + AT_rich Low_complexity Low_complexity 1 33 0 2345 48 41 0 chr2 23965906 23966197 -229290386 - AluY SINE Alu -8 303 1 482 257 125 0 chr2 23966503 23966655 -229289928 - MIR SINE MIR -12 250 80 340 314 51 29 chr2 23967492 23967667 -229288916 + MIR SINE MIR 13 191 -71 1127 196 31 9 chr2 23967708 23967937 -229288646 + L1MB4 LINE L1 5947 6180 0 347 298 139 6 chr2 23968691 23968849 -229287734 - MIR SINE MIR -4 258 80 2175 117 0 0 chr2 23969232 23969539 -229287044 + AluSx SINE Alu 1 307 -5 1969 106 7 3 chr2 23970383 23970665 -229285918 + AluSx SINE Alu 7 289 -23 2204 113 0 3 chr2 23970674 23970983 -229285600 + AluSq SINE Alu 1 308 -5 934 239 20 20 chr2 23971500 23971747 -229284836 + MIR SINE MIR 16 262 0 231 281 123 18 chr2 23971784 23971898 -229284685 + L2 LINE L2 3180 3305 -8 523 313 39 30 chr2 23972315 23972545 -229284038 - MIR SINE MIR -14 248 17 413 341 78 27 chr2 23972502 23972910 -229283673 + L2 LINE L2 2246 2674 -640 * 327 282 11 83 chr2 23973195 23973298 -229283285 + MIR SINE MIR 94 203 -59 2334 61 0 7 chr2 23973298 23973591 -229282992 + AluY SINE Alu 1 291 -20 327 282 11 83 chr2 23973591 23973603 -229282980 + MIR SINE MIR 203 214 -48 2114 100 0 7 chr2 23973603 23973894 -229282689 + AluSc SINE Alu 1 289 -20 327 282 11 83 chr2 23973894 23973906 -229282677 + MIR SINE MIR 214 225 -37 2103 114 0 3 chr2 23973906 23974204 -229282379 + AluSc SINE Alu 1 297 -12 327 282 11 83 chr2 23974204 23974255 -229282328 + MIR SINE MIR 225 261 -1 2312 86 0 7 chr2 23974753 23975056 -229281527 + AluSq SINE Alu 1 301 -12 1282 222 109 52 chr2 23976016 23976457 -229280126 + MLT1C LTR MaLR 1 466 -1 2115 129 3 0 chr2 23977934 23978245 -229278338 - AluSx SINE Alu 0 312 1 927 194 0 17 chr2 23979380 23979560 -229277023 - L1MB5 LINE L1 -6 6168 5992 2243 77 30 3 chr2 23979572 23979870 -229276713 - AluSq SINE Alu -7 306 1 186 338 27 0 chr2 23980077 23980151 -229276432 + L2 LINE L2 3186 3261 -11 262 252 30 99 chr2 23981807 23981938 -229274645 + MER5A DNA MER1_type 60 181 -8 278 122 0 0 chr2 23983082 23983123 -229273460 + MER91 DNA MER1_type 4 44 -146 319 289 58 8 chr2 23983269 23983390 -229273193 - MIR3 SINE MIR -53 155 29 417 292 128 60 chr2 23984051 23984466 -229272117 - L2 LINE L2 0 3313 2871 217 234 0 0 chr2 23985226 23985273 -229271310 + L2 LINE L2 3226 3272 0 251 276 0 69 chr2 23987196 23987283 -229269300 + MIR SINE MIR 111 191 -71 356 252 35 49 chr2 23988478 23988621 -229267962 - MIR SINE MIR -55 207 67 333 0 0 0 chr2 23990519 23990556 -229266027 + (TG)n Simple_repeat Simple_repeat 2 38 0 322 219 31 0 chr2 23990556 23990620 -229265963 + L1MC4 LINE L1 6640 6705 -1337 2334 102 0 3 chr2 23990621 23990934 -229265649 - AluSx SINE Alu 0 312 1 204 219 234 0 chr2 23990936 23991000 -229265583 + MIR3 SINE MIR 124 202 -6 390 264 155 13 chr2 23991354 23991509 -229265074 - MIR SINE MIR 0 262 86 212 289 48 29 chr2 23992441 23992545 -229264038 + MIR SINE MIR 89 194 -68 279 290 23 11 chr2 23992684 23992860 -229263723 + (TA)n Simple_repeat Simple_repeat 2 179 0 673 293 85 29 chr2 23994116 23994362 -229262221 - MIR SINE MIR 0 262 3 881 149 0 8 chr2 23995829 23995963 -229260620 - FLAM_C SINE Alu 0 133 1 1483 86 247 0 chr2 23997349 23997604 -229258979 - AluYb8 SINE Alu 0 318 1 1675 162 52 0 chr2 23998317 23998607 -229257976 - AluJb SINE Alu -7 305 1 2177 102 3 0 chr2 23998983 23999278 -229257305 - AluSx SINE Alu -16 296 1 273 57 0 0 chr2 23999349 23999384 -229257199 + (TG)n Simple_repeat Simple_repeat 1 35 0 461 84 14 0 chr2 23999384 23999455 -229257128 + (GA)n Simple_repeat Simple_repeat 2 73 0 1919 171 50 28 chr2 24000029 24000386 -229256197 - MLT1A1 LTR MaLR 0 365 1 2102 131 30 24 chr2 24000769 24001104 -229255479 + MER1B DNA MER1_type 1 337 0 263 327 92 0 chr2 24001568 24001721 -229254862 + L2 LINE L2 3095 3261 -11 201 121 0 0 chr2 24002062 24002095 -229254488 + (TAA)n Simple_repeat Simple_repeat 1 33 0 304 326 12 0 chr2 24002315 24002401 -229254182 - L2 LINE L2 0 3313 3227 601 289 59 15 chr2 24002889 24003093 -229253490 - MIR SINE MIR 0 262 50 664 242 21 21 chr2 24004072 24004258 -229252325 - L2 LINE L2 0 3313 3128 758 290 102 37 chr2 24004684 24005672 -229250911 + L1MEd LINE L1 552 1475 -4835 1889 125 11 0 chr2 24005672 24005976 -229250607 + AluSx SINE Alu 1 307 0 758 290 102 37 chr2 24005976 24006660 -229249923 + L1MEd LINE L1 1475 2398 -3912 2493 65 0 0 chr2 24006693 24007000 -229249583 + AluSg SINE Alu 1 307 -3 1788 119 20 38 chr2 24007053 24007595 -229248988 + MER4A LTR ERV1 1 664 0 349 308 54 21 chr2 24007603 24007843 -229248740 + L1MEd LINE L1 2447 2694 -3435 340 244 225 34 chr2 24007843 24008052 -229248531 - L2 LINE L2 -176 3137 2889 224 193 123 0 chr2 24008397 24008454 -229248129 - MIR SINE MIR -78 184 121 282 353 73 18 chr2 24009799 24010017 -229246566 - MIR SINE MIR 0 262 33 1952 201 86 42 chr2 24011475 24011973 -229244610 + MLT2B1 LTR ERVL 1 520 0 234 271 96 131 chr2 24013035 24013326 -229243257 - L2 LINE L2 -16 3256 2976 198 0 0 0 chr2 24014386 24014408 -229242175 + (CAG)n Simple_repeat Simple_repeat 1 22 0 294 131 28 56 chr2 24014675 24014782 -229241801 + GA-rich Low_complexity Low_complexity 3 106 0 408 258 75 0 chr2 24015285 24015437 -229241146 - MIR SINE MIR -63 145 23 215 210 118 67 chr2 24015456 24015575 -229241008 + L2 LINE L2 2948 3072 -200 633 299 85 0 chr2 24015987 24016198 -229240385 - MIR SINE MIR -21 241 13 211 188 62 0 chr2 24016219 24016267 -229240316 - L2 LINE L2 -96 3176 3126 399 351 36 36 chr2 24018012 24018263 -229238320 - MIR SINE MIR -2 260 10 1562 194 41 36 chr2 24018916 24019232 -229237351 + MLT1A2 LTR MaLR 4 324 -50 2017 107 13 131 chr2 24019232 24019614 -229236969 - MER1B DNA MER1_type 0 337 1 1562 194 41 36 chr2 24019614 24019662 -229236921 + MLT1A2 LTR MaLR 324 370 -4 1992 106 3 20 chr2 24021118 24021419 -229235164 - AluSg SINE Alu -14 296 1 919 172 0 0 chr2 24021715 24021866 -229234717 + FRAM SINE Alu 1 151 -25 211 340 92 25 chr2 24023065 24023380 -229233203 - L2 LINE L2 -1152 2162 1827 274 242 111 40 chr2 24023646 24023687 -229232896 + MIR SINE MIR 42 79 -129 1972 145 0 13 chr2 24023687 24023997 -229232586 - AluSx SINE Alu -6 306 1 274 242 111 40 chr2 24023997 24024054 -229232529 + MIR SINE MIR 79 147 -61 491 319 11 27 chr2 24025159 24025347 -229231236 + MER5A DNA MER1_type 1 185 -4 384 287 67 27 chr2 24026014 24026164 -229230419 - LTR67 LTR ERVL -296 261 106 462 259 38 13 chr2 24026714 24026872 -229229711 - MLT1H1 LTR MaLR -42 513 352 324 0 0 0 chr2 24026966 24027002 -229229581 + (TG)n Simple_repeat Simple_repeat 2 37 0 207 0 0 0 chr2 24028066 24028089 -229228494 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 316 219 47 0 chr2 24028317 24028381 -229228202 - MER91A DNA MER1_type -3 193 127 275 292 73 29 chr2 24029792 24029929 -229226654 + L2 LINE L2 3169 3311 -2 598 238 127 23 chr2 24031263 24031570 -229225013 - L1ME4a LINE L1 0 6121 5783 560 352 270 17 chr2 24032870 24033861 -229222722 - L3 LINE CR1 -123 1454 213 207 274 94 17 chr2 24033960 24034077 -229222506 - MIR SINE MIR -125 137 12 431 259 94 102 chr2 24034750 24034911 -229221672 - MIR SINE MIR -8 254 94 2272 110 0 0 chr2 24034911 24035212 -229221371 + AluSx SINE Alu 1 301 -11 431 259 94 102 chr2 24035212 24035305 -229221278 - MIR SINE MIR -168 94 2 472 252 49 14 chr2 24040012 24040155 -229216428 + MIR SINE MIR 78 225 -37 393 313 165 3 chr2 24040562 24040914 -229215669 + L2 LINE L2 2344 2752 -562 224 353 34 34 chr2 24041056 24041175 -229215408 + L2 LINE L2 3147 3265 -7 463 301 27 0 chr2 24041431 24041577 -229215006 + MIR SINE MIR 113 262 0 793 285 61 0 chr2 24042011 24042257 -229214326 + MIR SINE MIR 2 262 0 188 306 51 20 chr2 24043211 24043309 -229213274 + L2 LINE L2 2725 2825 -489 223 330 232 0 chr2 24044736 24044848 -229211735 - L3 LINE CR1 -438 1139 1002 1786 153 38 38 chr2 24044874 24045247 -229211336 - MLT1B LTR MaLR -17 373 1 769 319 153 25 chr2 24045553 24045985 -229210598 - L3 LINE CR1 -184 1393 907 295 198 52 21 chr2 24046353 24046450 -229210133 - MIR3 SINE MIR -10 198 98 2218 104 0 13 chr2 24047093 24047400 -229209183 + AluSx SINE Alu 1 303 -9 225 330 184 19 chr2 24047918 24048124 -229208459 - MIR SINE MIR -19 243 4 192 179 0 0 chr2 24048290 24048329 -229208254 + (TGGA)n Simple_repeat Simple_repeat 2 40 0 180 0 0 0 chr2 24050142 24050162 -229206421 + (A)n Simple_repeat Simple_repeat 1 20 0 303 272 16 24 chr2 24051255 24051372 -229205211 + C-rich Low_complexity Low_complexity 1 116 0 238 279 0 0 chr2 24052203 24052264 -229204319 + L2 LINE L2 3101 3161 -111 661 298 28 6 chr2 24052280 24052461 -229204122 - MER91B DNA MER1_type -5 185 1 665 277 43 30 chr2 24052465 24052696 -229203887 - MIR SINE MIR -13 249 16 203 329 24 12 chr2 24053088 24053170 -229203413 + L2 LINE L2 2685 2767 -547 2218 117 0 16 chr2 24053953 24054269 -229202314 + AluSq SINE Alu 1 311 -2 1831 179 0 3 chr2 24054269 24054576 -229202007 + AluJo SINE Alu 1 307 -5 287 219 323 0 chr2 24055120 24055216 -229201367 + L2 LINE L2 3187 3313 0 509 247 105 0 chr2 24056091 24056258 -229200325 + MIR SINE MIR 16 197 -61 2288 178 52 0 chr2 24058731 24059136 -229197447 - MSTB LTR MaLR 0 426 1 195 204 0 23 chr2 24059353 24059397 -229197186 - L2 LINE L2 -80 3233 3191 329 247 67 11 chr2 24060573 24060662 -229195921 + MER5B DNA MER1_type 85 178 0 258 307 99 0 chr2 24061479 24061580 -229195003 - L2 LINE L2 -2 3270 3160 642 60 0 0 chr2 24064128 24064211 -229192372 + (TC)n Simple_repeat Simple_repeat 1 83 0 183 270 135 0 chr2 24065845 24065919 -229190664 + L2 LINE L2 3126 3209 -63 207 370 8 8 chr2 24066352 24066471 -229190112 + (CACG)n Simple_repeat Simple_repeat 1 119 0 * 464 297 14 7 chr2 24066409 24066788 -229189795 + (CA)n Simple_repeat Simple_repeat 1 381 0 268 262 12 0 chr2 24066833 24067001 -229189582 + (CA)n Simple_repeat Simple_repeat 1 170 0 266 303 18 9 chr2 24067040 24067149 -229189434 + (CA)n Simple_repeat Simple_repeat 1 110 0 2393 70 3 0 chr2 24069391 24069692 -229186891 - AluY SINE Alu -9 302 1 823 169 0 15 chr2 24069719 24069855 -229186728 + AluJo SINE Alu 1 134 -178 730 217 17 22 chr2 24071585 24071765 -229184818 + MLT1H LTR MaLR 189 367 -182 2600 133 76 7 chr2 24071824 24072269 -229184314 + L1MB2 LINE L1 5696 6171 0 1452 201 143 39 chr2 24072365 24072798 -229183785 - MLT1H LTR MaLR 0 549 72 326 320 44 10 chr2 24073280 24073486 -229183097 - L2 LINE L2 -627 2687 2475 470 195 16 55 chr2 24074859 24074987 -229181596 - MIR3 SINE MIR -77 131 9 258 356 37 7 chr2 24075512 24075647 -229180936 - MIR SINE MIR -122 140 2 316 235 163 0 chr2 24076269 24076367 -229180216 - MIR SINE MIR -56 152 39 26 30 0 0 chr2 24077531 24077564 -229179019 + AT_rich Low_complexity Low_complexity 1 33 0 225 0 0 0 chr2 24077872 24077897 -229178686 + (TCC)n Simple_repeat Simple_repeat 1 25 0 487 263 39 39 chr2 24079536 24079715 -229176868 + MIR3 SINE MIR 11 189 -19 394 288 113 6 chr2 24083473 24083633 -229172950 - MIR3 SINE MIR -31 177 1 337 321 196 15 chr2 24087299 24087834 -229168749 + L2 LINE L2 2227 2858 -456 200 394 112 0 chr2 24087948 24088197 -229168386 + L2 LINE L2 2964 3240 -32 660 332 92 28 chr2 24092820 24093431 -229163152 + L2 LINE L2 1059 1708 -1606 1525 201 53 15 chr2 24093445 24093842 -229162741 - MER63B DNA MER1_type -24 412 1 212 323 86 21 chr2 24093844 24093937 -229162646 + L2 LINE L2 1712 1810 -1504 443 290 148 49 chr2 24094172 24094640 -229161943 + L2 LINE L2 2230 2753 -561 1976 158 0 14 chr2 24094640 24094937 -229161646 + AluJo SINE Alu 1 293 -19 443 290 148 49 chr2 24094937 24094975 -229161608 + L2 LINE L2 2753 2786 -528 2245 82 6 67 chr2 24095003 24095332 -229161251 - AluSp SINE Alu -4 309 1 1496 129 4 0 chr2 24095384 24095616 -229160967 - Tigger5 DNA MER2_type -5 2318 2086 449 339 35 71 chr2 24095694 24096060 -229160523 + L2 LINE L2 2897 3249 -23 2310 99 0 0 chr2 24097693 24097986 -229158597 + AluSx SINE Alu 1 293 -19 386 250 67 25 chr2 24098149 24098269 -229158314 + MIR3 SINE MIR 77 201 -7 2398 84 3 3 chr2 24098419 24098715 -229157868 + AluSg SINE Alu 1 296 -14 28 0 0 0 chr2 24101445 24101473 -229155110 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr2 24101782 24101807 -229154776 + AT_rich Low_complexity Low_complexity 1 25 0 2472 83 3 6 chr2 24102236 24102550 -229154033 - AluSp SINE Alu 0 313 1 464 326 82 43 chr2 24103346 24103818 -229152765 + L1ME LINE L1 5191 5680 -441 285 229 29 0 chr2 24103830 24103900 -229152683 - MER2 DNA MER2_type -6 339 268 1242 144 10 0 chr2 24103926 24104134 -229152449 - MER2 DNA MER2_type -135 210 1 219 239 22 0 chr2 24104151 24104197 -229152386 - L2 LINE L2 -18 3254 3208 33 25 0 0 chr2 24104467 24104507 -229152076 + AT_rich Low_complexity Low_complexity 1 40 0 2394 98 0 16 chr2 24104562 24104879 -229151704 - AluSx SINE Alu 0 312 1 297 216 129 17 chr2 24105102 24105218 -229151365 - MIR SINE MIR -57 205 77 288 93 0 0 chr2 24106290 24106333 -229150250 - MADE1 DNA Mariner 0 80 38 2617 128 43 47 chr2 24106616 24107125 -229149458 - L1MB7 LINE L1 0 6184 5678 446 289 20 0 chr2 24107126 24107275 -229149308 + MER103 DNA DNA 9 160 -6 2520 63 0 3 chr2 24107448 24107748 -229148835 - AluY SINE Alu -12 299 1 2404 110 0 0 chr2 24107781 24108081 -229148502 + AluSx SINE Alu 1 300 -12 2391 72 3 3 chr2 24108501 24108794 -229147789 + AluY SINE Alu 1 293 -18 22 0 0 0 chr2 24108806 24108828 -229147755 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 24109647 24109682 -229146901 + (TTG)n Simple_repeat Simple_repeat 2 36 0 223 317 118 59 chr2 24109913 24110134 -229146449 + L2 LINE L2 1106 1339 -1975 255 365 0 8 chr2 24111219 24111345 -229145238 + L1MC2 LINE L1 5 129 -6411 2640 175 56 2 chr2 24111818 24112297 -229144286 - MLT1D LTR MaLR 0 505 1 601 245 26 86 chr2 24112314 24112616 -229143967 + L1MC2 LINE L1 922 1205 -5338 4158 160 13 4 chr2 24112617 24113322 -229143261 + L1M3f LINE L1 1 711 -4617 10471 161 42 93 chr2 24113336 24113500 -229143083 + L1MA5A LINE L1 14 185 -6603 2172 122 3 20 chr2 24113500 24113803 -229142780 + AluSx SINE Alu 1 298 -14 10471 161 42 93 chr2 24113803 24116112 -229140471 + L1MA5A LINE L1 185 2450 -4338 486 186 0 35 chr2 24116112 24116218 -229140365 + L1MA5A LINE L1 5869 5972 -828 1935 179 0 3 chr2 24116218 24116530 -229140053 + AluJb SINE Alu 1 311 -1 486 186 0 35 chr2 24116530 24116543 -229140040 + L1MA5A LINE L1 5972 5984 -816 520 148 16 49 chr2 24116545 24116728 -229139855 + GA-rich Low_complexity Low_complexity 4 180 0 4877 111 23 15 chr2 24116728 24117619 -229138964 + L1MA5A LINE L1 5975 6938 -1 2540 228 96 36 chr2 24117642 24117970 -229138613 + L1MC2 LINE L1 1427 1734 -4806 2730 46 0 0 chr2 24117970 24118275 -229138308 + AluY SINE Alu 1 305 -6 2540 228 96 36 chr2 24118275 24119006 -229137577 + L1MC2 LINE L1 1734 2550 -3990 2515 133 93 137 chr2 24119013 24119432 -229137151 + L1MB2 LINE L1 5444 5817 -354 2297 141 62 31 chr2 24119432 24119852 -229136731 - Tigger2a DNA MER2_type 0 434 2 2515 133 93 137 chr2 24119852 24120191 -229136392 + L1MB2 LINE L1 5817 6169 -2 282 217 38 57 chr2 24120188 24120345 -229136238 + L1MC2 LINE L1 2573 2726 -3995 * 5295 159 54 13 chr2 24120347 24121465 -229135118 + L1MC2 LINE L1 5582 6737 -1 311 176 104 64 chr2 24121468 24121593 -229134990 + L1MC4a LINE L1 5889 6018 -1790 775 241 37 78 chr2 24121623 24122046 -229134537 + L1MC4a LINE L1 6098 6537 -1271 2401 92 169 5 chr2 24122046 24122414 -229134169 - MSTA LTR MaLR 0 428 1 775 241 37 78 chr2 24122414 24122425 -229134158 + L1MC4a LINE L1 6537 6516 -1292 1575 190 145 18 chr2 24122425 24122867 -229133716 + LTR54B LTR ERV1 1 498 0 775 241 37 78 chr2 24122867 24122891 -229133692 + L1MC4a LINE L1 6515 6538 -1270 2505 230 94 41 chr2 24122899 24123593 -229132990 + L1MDa LINE L1 2666 3432 -3108 2673 68 0 0 chr2 24123593 24123904 -229132679 + AluY SINE Alu 1 311 0 2505 230 94 41 chr2 24123904 24124218 -229132365 + L1MDa LINE L1 3432 3728 -2812 1774 198 46 86 chr2 24124225 24124754 -229131829 + L1MC5 LINE L1 6834 7328 -633 1092 141 141 24 chr2 24124754 24124912 -229131671 - MER33 DNA MER1_type -2261 324 186 1377 178 75 68 chr2 24124912 24125205 -229131378 + AluJo SINE Alu 1 295 -17 1092 141 141 24 chr2 24125205 24125336 -229131247 - MER33 DNA MER1_type -2399 186 1 1774 198 46 86 chr2 24125336 24125527 -229131056 + L1MC5 LINE L1 7328 7525 -436 439 298 93 52 chr2 24125574 24125803 -229130780 + L1ME3A LINE L1 5925 6163 -1 696 263 56 16 chr2 24126045 24126296 -229130287 + MIR SINE MIR 2 262 0 599 336 128 52 chr2 24126366 24127311 -229129272 + L2 LINE L2 1825 3082 -190 2211 118 113 42 chr2 24127311 24127364 -229129219 - MSTA LTR MaLR 0 428 380 2187 118 3 10 chr2 24127364 24127668 -229128915 - AluSx SINE Alu -10 302 1 2211 118 113 42 chr2 24127668 24128014 -229128569 - MSTA LTR MaLR -48 380 1 599 336 128 52 chr2 24128014 24128211 -229128372 + L2 LINE L2 3082 3263 -9 317 295 16 25 chr2 24129399 24129521 -229127062 - HAL1 LINE L1 -1753 754 634 825 207 39 17 chr2 24129537 24129769 -229126814 + HAL1 LINE L1 800 1036 -1471 44577 35 1 1 chr2 24129777 24135920 -229120663 + L1PA4 LINE L1 13 6149 -6 388 300 90 9 chr2 24136065 24136288 -229120295 + HAL1 LINE L1 1284 1524 -983 1275 226 100 102 chr2 24136314 24136493 -229120090 + HAL1 LINE L1 1769 1947 -560 2081 102 27 14 chr2 24136493 24136787 -229119796 + AluSx SINE Alu 1 298 -14 1275 226 100 102 chr2 24136787 24136845 -229119738 + HAL1 LINE L1 1947 2004 -503 1689 154 7 7 chr2 24136845 24137117 -229119466 - AluJo SINE Alu -23 289 18 1275 226 100 102 chr2 24137117 24137617 -229118966 + HAL1 LINE L1 2004 2506 -1 957 272 1 25 chr2 24137698 24137951 -229118632 - MIR SINE MIR -4 258 14 1937 122 0 4 chr2 24138212 24138490 -229118093 + AluSx SINE Alu 1 277 -35 228 130 0 0 chr2 24138492 24138538 -229118045 + (CAAG)n Simple_repeat Simple_repeat 3 48 0 790 37 0 59 chr2 24138553 24138689 -229117894 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 644 292 84 0 chr2 24138736 24138938 -229117645 + MIR SINE MIR 16 234 -28 377 253 110 32 chr2 24138959 24139113 -229117470 + L2 LINE L2 3109 3274 -39 222 258 298 26 chr2 24139202 24139353 -229117230 + L2 LINE L2 2909 3100 -172 986 194 116 41 chr2 24139427 24139669 -229116914 + MIR SINE MIR 2 261 -1 234 305 84 21 chr2 24139676 24139771 -229116812 + L2 LINE L2 3163 3263 -9 216 328 67 44 chr2 24139777 24139957 -229116626 - L2 LINE L2 -690 2624 2441 613 233 0 0 chr2 24140146 24140266 -229116317 + L2 LINE L2 3193 3312 -1 266 119 45 15 chr2 24140507 24140574 -229116009 + (TA)n Simple_repeat Simple_repeat 1 69 0 264 303 124 0 chr2 24140876 24140965 -229115618 + L2 LINE L2 3143 3242 -30 22 0 0 0 chr2 24143132 24143154 -229113429 + AT_rich Low_complexity Low_complexity 1 22 0 250 162 27 0 chr2 24145655 24145729 -229110854 + (TA)n Simple_repeat Simple_repeat 1 76 0 590 214 103 0 chr2 24145764 24145890 -229110693 - MIR SINE MIR -104 158 20 353 257 89 10 chr2 24146514 24146615 -229109968 + L2 LINE L2 3190 3298 -15 257 317 14 35 chr2 24146695 24146837 -229109746 + L3 LINE CR1 1275 1413 -164 273 357 123 6 chr2 24150023 24150194 -229106389 - MIR SINE MIR -25 237 47 267 271 156 10 chr2 24153474 24153570 -229103013 + L2 LINE L2 3201 3310 -3 2004 142 0 10 chr2 24153587 24153897 -229102686 + AluSx SINE Alu 1 307 -5 585 42 0 0 chr2 24153908 24153980 -229102603 + (CA)n Simple_repeat Simple_repeat 2 73 0 1312 113 0 10 chr2 24154564 24154759 -229101824 + MER46A DNA MER2_type 44 236 0 416 301 58 90 chr2 24155959 24156458 -229100125 + L2 LINE L2 2014 2496 -818 2081 200 20 38 chr2 24156499 24156552 -229100031 - L1MB8 LINE L1 -192 5986 5934 472 229 8 0 chr2 24156552 24156670 -229099913 - L1MB7 LINE L1 -10 6174 6056 2081 200 20 38 chr2 24156670 24156805 -229099778 - L1MB8 LINE L1 -244 5934 5798 1776 176 0 7 chr2 24156805 24157100 -229099483 - AluJo SINE Alu -19 293 1 2081 200 20 38 chr2 24157100 24157415 -229099168 - L1MB8 LINE L1 -380 5798 5550 381 278 19 28 chr2 24157531 24157639 -229098944 - MER5A DNA MER1_type -3 186 80 273 289 123 8 chr2 24157705 24157907 -229098676 - L2 LINE L2 -3 3310 3030 229 311 66 78 chr2 24158005 24158262 -229098321 + L2 LINE L2 2923 3176 -96 317 338 34 81 chr2 24159998 24160232 -229096351 - L2 LINE L2 -173 3099 2877 1774 189 153 27 chr2 24160237 24160713 -229095870 + LTR10A LTR ERV1 13 548 -61 706 326 65 41 chr2 24160811 24161098 -229095485 - L2 LINE L2 -611 2703 2401 182 62 31 0 chr2 24161098 24161130 -229095453 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 706 326 65 41 chr2 24161130 24161256 -229095327 - L2 LINE L2 -913 2401 2280 1357 245 20 69 chr2 24161347 24161461 -229095122 - L1ME1 LINE L1 -12 6227 6109 1489 144 6 117 chr2 24161461 24161794 -229094789 + AluJo SINE Alu 1 296 -6 1357 245 20 69 chr2 24161794 24162266 -229094317 - L1ME1 LINE L1 -130 6109 5675 414 216 10 62 chr2 24162269 24162366 -229094217 + MER2 DNA MER2_type 6 97 -248 2065 89 4 7 chr2 24162366 24162647 -229093936 + AluSg SINE Alu 1 280 -30 30 0 0 0 chr2 24162647 24162677 -229093906 + AT_rich Low_complexity Low_complexity 1 30 0 1095 186 33 89 chr2 24162747 24162920 -229093663 - L1ME1 LINE L1 -562 5673 5492 1733 118 114 7 chr2 24162920 24163191 -229093392 - AluSg1 SINE Alu -9 300 1 1095 186 33 89 chr2 24163191 24163237 -229093346 - L1ME1 LINE L1 -743 5492 5445 2069 111 7 21 chr2 24163237 24163556 -229093027 + AluSx SINE Alu 3 317 0 1095 186 33 89 chr2 24163556 24163697 -229092886 - L1ME1 LINE L1 -790 5445 5322 * 3322 226 82 13 chr2 24163690 24164660 -229091923 - L1ME1 LINE L1 -1115 5100 4064 482 161 117 72 chr2 24164761 24164941 -229091642 - L1ME1 LINE L1 -4121 2275 2088 * 1534 246 74 32 chr2 24164939 24165414 -229091169 - L1ME1 LINE L1 -5863 533 39 354 253 27 33 chr2 24165437 24165587 -229090996 - L1ME4a LINE L1 -279 5842 5694 1514 167 10 48 chr2 24165956 24166249 -229090334 - AluJo SINE Alu -30 282 1 1441 182 14 67 chr2 24166431 24166728 -229089855 + AluJo SINE Alu 1 281 -31 303 256 56 72 chr2 24166960 24167085 -229089498 + MIR SINE MIR 29 151 -111 1552 206 16 16 chr2 24167380 24167686 -229088897 + AluJo SINE Alu 1 306 -6 2268 116 0 0 chr2 24167825 24168135 -229088448 + AluSq SINE Alu 1 310 -3 2177 93 4 0 chr2 24168404 24168719 -229087864 - AluSc SINE Alu 0 316 1 360 297 203 17 chr2 24168935 24169068 -229087515 + L2 LINE L2 2132 2239 -1075 2059 86 4 0 chr2 24169068 24169347 -229087236 + AluSc SINE Alu 25 304 0 360 297 203 17 chr2 24169347 24169502 -229087081 + L2 LINE L2 2239 2475 -839 1777 158 70 57 chr2 24170101 24170486 -229086097 + MLT1B LTR MaLR 1 390 0 228 143 0 0 chr2 24170555 24170597 -229085986 + (TA)n Simple_repeat Simple_repeat 2 43 0 208 306 0 0 chr2 24171800 24171862 -229084721 - MIR SINE MIR -3 259 198 240 88 0 0 chr2 24171875 24171909 -229084674 + MER116 DNA Mariner 47 80 0 632 265 54 6 chr2 24171917 24172083 -229084500 - MIR SINE MIR -70 192 19 455 304 103 38 chr2 24172167 24172351 -229084232 + MER91A DNA MER1_type 1 196 0 2527 77 0 0 chr2 24172371 24172682 -229083901 - AluY SINE Alu 0 311 1 495 262 40 20 chr2 24172706 24172908 -229083675 + L1ME LINE L1 5563 5768 -353 1699 172 3 14 chr2 24173170 24173466 -229083117 + AluJo SINE Alu 1 293 -19 333 0 0 0 chr2 24173475 24173512 -229083071 + (TG)n Simple_repeat Simple_repeat 2 38 0 183 275 0 0 chr2 24173755 24173795 -229082788 - MER5B DNA MER1_type -138 40 1 2059 119 7 13 chr2 24173825 24174128 -229082455 + AluSx SINE Alu 1 301 -11 1625 162 101 204 chr2 24174242 24174537 -229082046 + MER90 LTR ERV1 1 325 -289 417 20 0 0 chr2 24174537 24174587 -229081996 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 2108 134 0 0 chr2 24174590 24174889 -229081694 + AluSx SINE Alu 1 299 -13 1625 162 101 204 chr2 24174889 24175009 -229081574 + MER90 LTR ERV1 327 458 -156 1871 168 0 13 chr2 24175009 24175324 -229081259 - AluJb SINE Alu -1 311 1 1625 162 101 204 chr2 24175324 24175588 -229080995 + MER90 LTR ERV1 458 614 0 29 60 0 0 chr2 24176319 24176369 -229080214 + AT_rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr2 24177922 24177946 -229078637 + AT_rich Low_complexity Low_complexity 1 24 0 274 265 44 0 chr2 24178147 24178215 -229078368 + MIR SINE MIR 120 190 -72 2184 129 42 3 chr2 24179532 24179866 -229076717 - MER7A DNA MER2_type 0 346 2 25 65 0 0 chr2 24179961 24180007 -229076576 + AT_rich Low_complexity Low_complexity 1 46 0 308 341 61 15 chr2 24182585 24182717 -229073866 + L2 LINE L2 3134 3271 -1 475 218 82 9 chr2 24182973 24183083 -229073500 - MIR SINE MIR -71 191 74 2690 186 127 17 chr2 24184058 24184656 -229071927 - L1MB8 LINE L1 -61 6117 5433 340 139 38 38 chr2 24184656 24184735 -229071848 + MADE1 DNA Mariner 1 79 -1 2690 186 127 17 chr2 24184735 24184824 -229071759 - L1MB8 LINE L1 -745 5433 5355 2425 166 55 7 chr2 24184818 24185275 -229071308 - L1MB3 LINE L1 -242 5941 5463 * 2068 93 54 0 chr2 24185275 24185554 -229071029 - AluY SINE Alu -17 294 1 2475 77 0 3 chr2 24185888 24186198 -229070385 + AluY SINE Alu 1 309 -2 21 36 0 0 chr2 24186793 24186821 -229069762 + AT_rich Low_complexity Low_complexity 1 28 0 254 325 12 0 chr2 24186902 24186982 -229069601 - L2 LINE L2 -5 3267 3187 1093 171 157 51 chr2 24187007 24187223 -229069360 - Charlie1 DNA MER1_type 0 2761 2569 1984 146 10 0 chr2 24187223 24187517 -229069066 - AluJb SINE Alu -15 297 1 1093 171 157 51 chr2 24187517 24187746 -229068837 - Charlie1 DNA MER1_type -192 2569 1 306 171 86 71 chr2 24187754 24187894 -229068689 - Charlie7 DNA MER1_type 0 2612 2471 354 244 101 6 chr2 24188315 24188483 -229068100 - L1ME4a LINE L1 0 6121 5938 395 214 0 0 chr2 24188534 24188604 -229067979 - AluJ/FRAM SINE Alu -3 299 230 2289 110 7 0 chr2 24188806 24189116 -229067467 + AluSx SINE Alu 1 312 0 860 139 8 0 chr2 24189159 24189281 -229067302 + FLAM_C SINE Alu 1 123 -20 251 247 49 12 chr2 24190031 24190112 -229066471 - MIR SINE MIR -107 155 72 1762 134 106 12 chr2 24190761 24191090 -229065493 - MER46B DNA MER2_type -1 235 1 303 286 252 7 chr2 24191103 24191250 -229065333 - MIR SINE MIR -37 225 43 22 0 0 0 chr2 24191250 24191272 -229065311 + AT_rich Low_complexity Low_complexity 1 22 0 2364 103 7 0 chr2 24192498 24192808 -229063775 + AluSx SINE Alu 1 312 0 23 0 0 0 chr2 24193287 24193310 -229063273 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 24194024 24194046 -229062537 + AT_rich Low_complexity Low_complexity 1 22 0 186 191 24 0 chr2 24194385 24194427 -229062156 + MER5C DNA MER1_type 74 116 -208 21 57 0 0 chr2 24194912 24194947 -229061636 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 24195348 24195374 -229061209 + AT_rich Low_complexity Low_complexity 1 26 0 252 86 0 0 chr2 24196521 24196556 -229060027 + (CA)n Simple_repeat Simple_repeat 2 36 0 447 257 44 71 chr2 24196612 24196795 -229059788 + MER5A DNA MER1_type 9 186 -3 2260 108 0 9 chr2 24198065 24198380 -229058203 + AluSq SINE Alu 1 312 -1 587 297 50 53 chr2 24198565 24198865 -229057718 - L1MC4a LINE L1 -1921 5887 5589 582 332 113 39 chr2 24198891 24199863 -229056720 - L1MC4a LINE L1 -743 5403 4562 419 289 132 0 chr2 24200007 24200128 -229056455 - MIR SINE MIR -111 151 15 189 107 0 0 chr2 24200479 24200507 -229056076 + (CA)n Simple_repeat Simple_repeat 2 29 0 1996 97 0 0 chr2 24200778 24201037 -229055546 + AluY SINE Alu 37 295 -16 470 113 62 0 chr2 24201037 24201197 -229055386 + (TA)n Simple_repeat Simple_repeat 1 170 0 391 163 36 9 chr2 24201211 24201444 -229055139 + (TA)n Simple_repeat Simple_repeat 1 239 0 2161 106 3 0 chr2 24204175 24204467 -229052116 + AluSx SINE Alu 1 293 -19 263 214 51 51 chr2 24204631 24204729 -229051854 + MIR3 SINE MIR 77 174 -34 420 117 0 0 chr2 24204847 24204924 -229051659 + (G)n Simple_repeat Simple_repeat 1 77 0 379 305 109 31 chr2 24205097 24205418 -229051165 - L1MC4a LINE L1 -1624 4522 4177 2451 63 0 0 chr2 24207428 24207752 -229048831 + AluSq SINE Alu 1 324 0 1036 177 14 146 chr2 24207920 24208215 -229048368 + MLT1A1 LTR MaLR 52 293 -72 1919 52 0 0 chr2 24208215 24208468 -229048115 + L1PA7 LINE L1 5911 6163 0 1036 177 14 146 chr2 24208468 24208533 -229048050 + MLT1A1 LTR MaLR 293 365 0 25 31 0 0 chr2 24208538 24208570 -229048013 + AT_rich Low_complexity Low_complexity 1 32 0 418 297 104 21 chr2 24208715 24208989 -229047594 + L1 LINE L1 4063 4366 -1780 22 0 0 0 chr2 24209008 24209030 -229047553 + AT_rich Low_complexity Low_complexity 1 22 0 2017 102 46 7 chr2 24209280 24209565 -229047018 + AluSc SINE Alu 1 296 -13 366 365 83 10 chr2 24209604 24209796 -229046787 - MIR SINE MIR -50 212 7 215 165 41 52 chr2 24209969 24210066 -229046517 + (TTATA)n Simple_repeat Simple_repeat 1 96 0 1813 149 6 35 chr2 24210159 24210474 -229046109 + AluJb SINE Alu 7 312 0 23 68 0 0 chr2 24210548 24210592 -229045991 + AT_rich Low_complexity Low_complexity 1 44 0 644 203 16 0 chr2 24210671 24210794 -229045789 + FLAM_A SINE Alu 1 125 -8 21 36 0 0 chr2 24210953 24210981 -229045602 + AT_rich Low_complexity Low_complexity 1 28 0 207 314 164 7 chr2 24211158 24211298 -229045285 - L2 LINE L2 -212 3060 2899 304 359 116 33 chr2 24211393 24211472 -229045111 - L2 LINE L2 -455 2859 2788 2209 90 10 10 chr2 24211472 24211773 -229044810 + AluSq SINE Alu 1 301 -12 304 359 116 33 chr2 24211773 24212306 -229044277 - L2 LINE L2 -526 2788 2196 549 298 47 30 chr2 24212527 24212762 -229043821 + L2 LINE L2 3075 3313 0 774 296 101 32 chr2 24212810 24213435 -229043148 + L1ME4a LINE L1 5452 6119 -2 517 299 42 0 chr2 24213946 24214090 -229042493 + MIR SINE MIR 61 210 -52 364 318 188 31 chr2 24214173 24214365 -229042218 + L2 LINE L2 3021 3242 -30 481 53 0 27 chr2 24214768 24214843 -229041740 + (CA)n Simple_repeat Simple_repeat 2 74 0 505 142 38 0 chr2 24214843 24214949 -229041634 + GA-rich Low_complexity Low_complexity 3 112 0 1928 147 24 0 chr2 24215629 24215922 -229040661 + AluSx SINE Alu 1 300 -12 1772 58 0 14 chr2 24217153 24217376 -229039207 + AluY SINE Alu 76 295 -16 27 29 0 0 chr2 24218210 24218244 -229038339 + AT_rich Low_complexity Low_complexity 1 34 0 941 72 16 16 chr2 24218244 24218369 -229038214 - AluSq/x SINE Alu -188 125 1 182 322 102 51 chr2 24218565 24218666 -229037917 + MIR SINE MIR 2 117 -145 2157 112 0 33 chr2 24218666 24218970 -229037613 + AluSx SINE Alu 1 294 -18 182 322 102 51 chr2 24218970 24219045 -229037538 + MIR SINE MIR 117 187 -75 2410 71 3 7 chr2 24219047 24219355 -229037228 + AluSq SINE Alu 1 307 -6 343 240 21 52 chr2 24219477 24219573 -229037010 - L2 LINE L2 0 3272 3180 22 56 0 0 chr2 24220186 24220222 -229036361 + AT_rich Low_complexity Low_complexity 1 36 0 1623 151 3 60 chr2 24220376 24220675 -229035908 - AluJb SINE Alu -30 282 1 1601 155 30 30 chr2 24221353 24221657 -229034926 - AluJo SINE Alu -8 304 1 427 286 32 22 chr2 24222463 24222640 -229033943 + MER5A DNA MER1_type 3 189 0 362 209 99 0 chr2 24222718 24222809 -229033774 - MER94 DNA DNA -34 100 1 25 0 0 0 chr2 24224486 24224511 -229032072 + AT_rich Low_complexity Low_complexity 1 25 0 31 0 0 0 chr2 24225464 24225495 -229031088 + AT_rich Low_complexity Low_complexity 1 31 0 210 323 0 0 chr2 24225598 24225663 -229030920 - MIR SINE MIR -94 114 50 1713 165 16 36 chr2 24225883 24226186 -229030397 + AluJb SINE Alu 2 298 -14 2145 122 3 0 chr2 24226402 24226697 -229029886 - AluSx SINE Alu -16 296 1 180 367 112 10 chr2 24227287 24227385 -229029198 - MIR3 SINE MIR -26 182 75 2417 233 148 23 chr2 24227863 24228635 -229027948 + L2 LINE L2 1201 2068 -1246 235 214 0 0 chr2 24228649 24228691 -229027892 + L2 LINE L2 2178 2219 -1095 994 150 0 93 chr2 24228833 24229059 -229027524 - MER3 DNA MER1_type -4 205 1 2416 103 0 0 chr2 24230619 24230931 -229025652 - AluSx SINE Alu 0 312 1 449 175 185 37 chr2 24231051 24231240 -229025343 + L1MB8 LINE L1 5116 5332 -814 849 163 0 0 chr2 24231240 24231369 -229025214 + FLAM_C SINE Alu 1 129 -14 3011 163 113 39 chr2 24231374 24232123 -229024460 + L1MB8 LINE L1 5315 6007 -171 2272 121 0 0 chr2 24232123 24232420 -229024163 + AluSq SINE Alu 1 297 -16 3011 163 113 39 chr2 24232420 24232440 -229024143 + L1MB8 LINE L1 6007 6024 -154 8884 168 60 17 chr2 24232440 24234122 -229022461 - MER52A LTR ERV1 0 1755 1 3011 163 113 39 chr2 24234122 24234150 -229022433 + L1MB8 LINE L1 6024 6172 -6 620 265 71 18 chr2 24235047 24235330 -229021253 - L1M4 LINE L1 -1089 5057 4760 969 303 35 25 chr2 24235626 24236147 -229020436 - L1M4 LINE L1 -1909 4237 3712 1564 207 39 55 chr2 24236182 24236674 -229019909 - L1ME1 LINE L1 -4 6231 5748 255 229 49 57 chr2 24236842 24236964 -229019619 - L1ME1 LINE L1 -2895 3320 3200 567 268 59 55 chr2 24237043 24237389 -229019194 - L1ME1 LINE L1 -3364 2851 2501 1560 151 0 103 chr2 24237389 24237708 -229018875 - AluJb SINE Alu -16 286 1 567 268 59 55 chr2 24237708 24237868 -229018715 - L1ME1 LINE L1 -3714 2501 2343 * 1537 116 0 34 chr2 24237860 24237981 -229018602 - L1MB7 LINE L1 -236 5948 5824 1667 204 0 7 chr2 24237981 24238280 -229018303 - AluJo SINE Alu -11 301 5 1537 116 0 34 chr2 24238280 24238425 -229018158 - L1MB7 LINE L1 -360 5824 5691 487 267 25 4 chr2 24238433 24238685 -229017898 - L1ME1 LINE L1 -3851 2364 2148 1610 236 65 21 chr2 24239142 24239804 -229016779 + L1ME LINE L1 784 1515 -5073 292 262 7 12 chr2 24239816 24239955 -229016628 + L1ME LINE L1 1552 1836 -4885 2431 260 81 44 chr2 24239966 24240402 -229016181 + L1MEc LINE L1 236 654 -5742 2311 105 0 3 chr2 24240402 24240708 -229015875 - AluSx SINE Alu -7 305 1 2431 260 81 44 chr2 24240708 24241623 -229014960 + L1MEc LINE L1 654 1638 -4758 1632 227 70 39 chr2 24241625 24242039 -229014544 + L1MB7 LINE L1 5585 6023 -161 2161 141 0 0 chr2 24242039 24242344 -229014239 - AluJo SINE Alu -3 309 5 1632 227 70 39 chr2 24242344 24242501 -229014082 + L1MB7 LINE L1 6023 6174 -10 1151 185 58 29 chr2 24242514 24242608 -229013975 + AluJb SINE Alu 42 132 -180 2205 103 0 3 chr2 24242608 24242899 -229013684 + AluSg SINE Alu 1 290 -20 1151 185 58 29 chr2 24242899 24243047 -229013536 + AluJb SINE Alu 132 291 -21 2258 102 0 26 chr2 24243089 24243394 -229013189 + AluSg SINE Alu 1 297 -13 1144 227 139 15 chr2 24243461 24243605 -229012978 + L1MEc LINE L1 1730 1855 -4541 1794 129 85 0 chr2 24243605 24243877 -229012706 + AluSx SINE Alu 1 295 -17 1144 227 139 15 chr2 24243877 24244207 -229012376 + L1MEc LINE L1 1855 2263 -4133 297 243 7 79 chr2 24244217 24244369 -229012214 + L1MA10 LINE L1 6187 6327 -7 521 227 99 58 chr2 24244371 24244613 -229011970 + L1ME LINE L1 2385 2636 -3904 593 256 81 49 chr2 24244615 24244934 -229011649 + L1ME LINE L1 2660 2996 -3544 2094 111 17 0 chr2 24244934 24245223 -229011360 + AluSx SINE Alu 1 294 -18 593 256 81 49 chr2 24245223 24245313 -229011270 + L1ME LINE L1 2996 3082 -3458 1273 79 22 11 chr2 24245365 24245543 -229011040 + AluY SINE Alu 122 301 -10 891 185 46 46 chr2 24245556 24245881 -229010702 + L1ME LINE L1 3178 3502 -3038 1180 155 33 59 chr2 24245883 24246154 -229010429 + L1MC2 LINE L1 5839 6102 -242 1257 188 50 122 chr2 24246164 24246526 -229010057 + MLT1A1 LTR MaLR 1 327 -38 1686 182 17 3 chr2 24246534 24246825 -229009758 - AluJb SINE Alu -17 295 1 1297 202 65 12 chr2 24246837 24247159 -229009424 - L1MC1 LINE L1 0 6333 5995 4271 222 79 69 chr2 24247197 24247680 -229008903 + L1ME LINE L1 3546 4023 -2535 809 173 0 0 chr2 24247680 24247807 -229008776 - FLAM_C SINE Alu -4 129 3 4271 222 79 69 chr2 24247807 24248021 -229008562 + L1ME LINE L1 4023 4233 -2325 2259 104 0 0 chr2 24248021 24248319 -229008264 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 24248319 24249348 -229007235 + L1ME LINE L1 4233 5250 -1308 2136 125 3 0 chr2 24249348 24249645 -229006938 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 24249645 24249780 -229006803 + L1ME LINE L1 5250 5382 -1176 2280 101 0 0 chr2 24249780 24250078 -229006505 + AluSq SINE Alu 1 298 -15 4271 222 79 69 chr2 24250078 24250296 -229006287 + L1ME LINE L1 5382 5596 -962 2138 118 7 0 chr2 24250296 24250592 -229005991 + AluSx SINE Alu 1 298 -14 4271 222 79 69 chr2 24250592 24251020 -229005563 + L1ME LINE L1 5596 6083 -475 1504 192 0 8 chr2 24251024 24251279 -229005304 + AluJo SINE Alu 35 287 -25 2314 90 0 7 chr2 24251290 24251589 -229004994 + AluSg SINE Alu 1 297 -13 1084 199 0 5 chr2 24251589 24251800 -229004783 - MER46A DNA MER2_type -26 210 1 262 214 14 90 chr2 24251810 24251955 -229004628 + L1ME LINE L1 6097 6230 -330 2106 139 3 0 chr2 24251962 24252263 -229004320 + AluSx SINE Alu 1 302 -10 873 221 4 83 chr2 24252276 24252310 -229004273 - MER58A DNA MER1_type -2199 221 186 736 158 0 43 chr2 24252310 24252449 -229004134 + FLAM_C SINE Alu 1 133 0 873 221 4 83 chr2 24252449 24252654 -229003929 - MER58A DNA MER1_type -2234 186 1 28 61 0 0 chr2 24252903 24252952 -229003631 + AT_rich Low_complexity Low_complexity 1 49 0 2501 66 0 7 chr2 24253123 24253426 -229003157 - AluY SINE Alu -10 301 1 2271 98 0 0 chr2 24253476 24253804 -229002779 - AluSx SINE Alu 0 328 1 1740 166 37 7 chr2 24253870 24254166 -229002417 - AluJo SINE Alu -7 305 1 837 278 99 36 chr2 24254168 24254614 -229001969 - L1MC1 LINE L1 -1983 5825 5352 240 35 0 0 chr2 24254673 24254702 -229001881 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1198 176 10 0 chr2 24254706 24254905 -229001678 - AluJb SINE Alu -25 287 87 1265 181 75 80 chr2 24254997 24255049 -229001534 + MSTD LTR MaLR 1 52 -344 2250 96 0 7 chr2 24255049 24255350 -229001233 + AluSx SINE Alu 1 299 -13 1265 181 75 80 chr2 24255350 24255684 -229000899 + MSTD LTR MaLR 52 385 -11 2125 127 0 0 chr2 24256072 24256377 -229000206 + AluSq SINE Alu 1 305 0 281 156 0 0 chr2 24256431 24256476 -229000107 + AluJb SINE Alu 1 45 -258 315 374 96 0 chr2 24256583 24256802 -228999781 - MIR SINE MIR -21 241 2 21 0 0 0 chr2 24256859 24256880 -228999703 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 24257064 24257085 -228999498 + AT_rich Low_complexity Low_complexity 1 21 0 1693 188 20 0 chr2 24257302 24257594 -228998989 + AluJo SINE Alu 1 298 -14 899 201 6 6 chr2 24257785 24257959 -228998624 - FRAM SINE Alu -3 173 1 1347 167 4 28 chr2 24258459 24258710 -228997873 + AluJb SINE Alu 52 296 -16 186 71 0 0 chr2 24258710 24258738 -228997845 + (CAGAA)n Simple_repeat Simple_repeat 2 29 0 1969 119 53 0 chr2 24259403 24259688 -228996895 - AluSx SINE Alu -12 300 1 25 31 0 0 chr2 24260090 24260122 -228996461 + AT_rich Low_complexity Low_complexity 1 32 0 25 51 0 0 chr2 24260341 24260380 -228996203 + AT_rich Low_complexity Low_complexity 1 39 0 26 50 0 0 chr2 24260577 24260617 -228995966 + AT_rich Low_complexity Low_complexity 1 40 0 2340 90 0 0 chr2 24260630 24260929 -228995654 + AluSq SINE Alu 1 299 -14 22 0 0 0 chr2 24260940 24260962 -228995621 + AT_rich Low_complexity Low_complexity 1 22 0 733 168 0 39 chr2 24260965 24261120 -228995463 + MER106B DNA MER1_type 1 149 -910 2363 91 7 3 chr2 24261507 24261814 -228994769 + AluSp SINE Alu 1 308 -5 488 314 65 90 chr2 24262374 24262928 -228993655 + L2 LINE L2 2182 2721 -593 1515 171 105 0 chr2 24263700 24263957 -228992626 - AluJo SINE Alu -28 284 1 21 0 0 0 chr2 24264285 24264306 -228992277 + AT_rich Low_complexity Low_complexity 1 21 0 2060 118 3 0 chr2 24265331 24265618 -228990965 + AluSg SINE Alu 21 308 -2 1946 154 7 0 chr2 24265669 24265968 -228990615 - AluJb SINE Alu -11 301 1 204 283 38 47 chr2 24266688 24266794 -228989789 + L2 LINE L2 791 895 -2419 2184 130 0 0 chr2 24267260 24267559 -228989024 - AluSg SINE Alu -11 299 1 419 159 0 34 chr2 24267561 24267649 -228988934 - AluJ/FRAM SINE Alu -8 304 220 631 197 7 56 chr2 24268744 24268886 -228987697 + MER2 DNA MER2_type 1 135 -210 444 195 18 2 chr2 24268922 24269104 -228987479 + MER2 DNA MER2_type 121 345 0 2098 131 0 0 chr2 24269288 24269586 -228986997 + AluSx SINE Alu 1 298 -14 715 177 47 5 chr2 24269628 24269820 -228986763 + L1M4 LINE L1 4966 5165 -981 1765 150 92 0 chr2 24269820 24270093 -228986490 + AluJb SINE Alu 1 298 -14 2297 95 0 0 chr2 24270158 24270454 -228986129 + AluY SINE Alu 1 296 -15 2104 119 3 23 chr2 24270603 24270905 -228985678 + AluSg SINE Alu 1 296 -14 2311 96 0 0 chr2 24271374 24271675 -228984908 - AluSc SINE Alu -8 301 1 2328 97 0 0 chr2 24271683 24271983 -228984600 - AluSg SINE Alu -10 300 1 2463 87 3 0 chr2 24272169 24272480 -228984103 + AluSp SINE Alu 1 312 -1 380 211 11 11 chr2 24272540 24272630 -228983953 + FLAM_C SINE Alu 29 118 -15 1624 107 4 43 chr2 24272634 24272868 -228983715 + AluSx SINE Alu 49 273 -39 642 104 0 0 chr2 24272869 24272965 -228983618 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 1879 116 55 10 chr2 24272972 24273265 -228983318 + AluSg SINE Alu 1 306 -4 483 153 382 0 chr2 24273292 24273423 -228983160 + AluJb SINE Alu 132 312 0 1727 185 62 58 chr2 24273425 24273462 -228983121 + L1ME LINE L1 5128 5163 -1003 2172 122 0 0 chr2 24273462 24273750 -228982833 + AluSx SINE Alu 1 288 -24 2306 67 0 3 chr2 24273760 24274073 -228982510 + AluY SINE Alu 1 312 0 1727 185 62 58 chr2 24274073 24274700 -228981883 + L1ME LINE L1 5171 5819 -347 1184 238 27 47 chr2 24274714 24275012 -228981571 + AluJo SINE Alu 2 293 -9 264 259 12 37 chr2 24275057 24275138 -228981445 + MIR SINE MIR 42 120 -88 2098 127 10 10 chr2 24275156 24275456 -228981127 + AluSx SINE Alu 1 300 -12 487 66 0 0 chr2 24275745 24275806 -228980777 - AluY SINE Alu -185 126 66 1205 97 0 0 chr2 24275806 24275960 -228980623 + AluY SINE Alu 142 295 -16 2207 92 13 7 chr2 24276741 24277044 -228979539 - AluSc SINE Alu -4 305 1 2098 126 3 0 chr2 24277109 24277394 -228979189 - AluSq SINE Alu -15 298 13 747 155 0 63 chr2 24277462 24277580 -228979003 + FLAM_A SINE Alu 1 110 -192 2048 134 27 0 chr2 24277580 24277879 -228978704 - AluSx SINE Alu -5 307 1 747 155 0 63 chr2 24277879 24277902 -228978681 + FLAM_A SINE Alu 110 133 -169 2236 94 3 7 chr2 24277910 24278218 -228978365 + AluY SINE Alu 1 307 -4 1898 168 0 19 chr2 24278447 24278756 -228977827 + AluJb SINE Alu 1 303 -9 2154 116 0 0 chr2 24279317 24279610 -228976973 + AluSq SINE Alu 1 293 -20 189 114 29 29 chr2 24280411 24280446 -228976137 - L2 LINE L2 -10 3303 3269 1899 144 0 3 chr2 24281395 24281679 -228974904 - AluJb SINE Alu -7 305 23 23 54 0 0 chr2 24281783 24281820 -228974763 + AT_rich Low_complexity Low_complexity 1 37 0 30 77 0 0 chr2 24281946 24282011 -228974572 + AT_rich Low_complexity Low_complexity 1 65 0 2427 85 0 0 chr2 24282105 24282411 -228974172 + AluY SINE Alu 1 306 -5 561 225 42 0 chr2 24282432 24282452 -228974131 - FLAM_A SINE Alu -186 125 107 1817 110 68 4 chr2 24282452 24282715 -228973868 + AluSg SINE Alu 2 281 -29 561 225 42 0 chr2 24282715 24282814 -228973769 - FLAM_A SINE Alu -204 107 1 22 0 0 0 chr2 24282823 24282845 -228973738 + AT_rich Low_complexity Low_complexity 1 22 0 2273 89 0 0 chr2 24284642 24284923 -228971660 - AluSx SINE Alu -31 281 1 181 0 0 65 chr2 24285325 24285356 -228971227 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 1980 122 3 3 chr2 24285363 24285650 -228970933 - AluSx SINE Alu -25 287 1 1785 121 92 0 chr2 24285652 24285925 -228970658 - AluSx SINE Alu -14 298 1 984 171 52 5 chr2 24285935 24286128 -228970455 - L1MA6 LINE L1 -5 6295 6094 470 217 9 43 chr2 24286188 24286303 -228970280 + L2 LINE L2 3186 3296 -17 459 0 0 0 chr2 24286360 24286411 -228970172 + (TA)n Simple_repeat Simple_repeat 2 52 0 1976 138 7 0 chr2 24286412 24286702 -228969881 - AluSq SINE Alu -16 297 6 2392 104 0 0 chr2 24286905 24287213 -228969370 - AluSx SINE Alu -4 308 1 1730 167 7 27 chr2 24287219 24287381 -228969202 - AluJo SINE Alu -19 293 138 2142 130 3 3 chr2 24287381 24287689 -228968894 - AluSg SINE Alu -2 308 1 1730 167 7 27 chr2 24287689 24287825 -228968758 - AluJo SINE Alu -174 138 1 2199 217 68 48 chr2 24288205 24288956 -228967627 - L1MC5 LINE L1 -37 7924 7159 1107 90 0 0 chr2 24288956 24289100 -228967483 - AluSp/q SINE Alu -10 303 160 1618 174 16 13 chr2 24289100 24289417 -228967166 - L1MB4 LINE L1 -158 6022 5705 1550 148 4 29 chr2 24289418 24289696 -228966887 - L1MB4 LINE L1 -592 5588 5318 1013 144 6 24 chr2 24289703 24289870 -228966713 - AluJb SINE Alu -13 299 136 2368 94 0 0 chr2 24289878 24290177 -228966406 - AluSc SINE Alu -10 299 1 400 286 12 25 chr2 24290203 24290364 -228966219 - L1M4 LINE L1 -6383 159 1 2212 169 9 0 chr2 24290445 24290789 -228965794 - MER7A DNA MER2_type -1 345 1 1661 170 4 0 chr2 24290851 24291110 -228965473 - AluSx SINE Alu -52 260 1 23 0 0 0 chr2 24291115 24291138 -228965445 + AT_rich Low_complexity Low_complexity 1 23 0 1130 216 57 63 chr2 24291144 24291283 -228965300 - L1MC4 LINE L1 -979 7063 6925 2081 117 6 19 chr2 24291283 24291599 -228964984 - AluSx SINE Alu 0 312 1 1130 216 57 63 chr2 24291599 24291810 -228964773 - L1MC4 LINE L1 -1117 6925 6715 1116 209 137 14 chr2 24291830 24292108 -228964475 + MER2 DNA MER2_type 6 317 -28 734 199 0 57 chr2 24292114 24292255 -228964328 - AluJo/FRAM SINE Alu -46 266 134 1761 133 0 4 chr2 24292256 24292497 -228964086 - AluSx SINE Alu -19 293 54 2189 92 3 0 chr2 24292499 24292782 -228963801 + AluSp SINE Alu 1 284 -29 21 0 0 0 chr2 24292789 24292810 -228963773 + AT_rich Low_complexity Low_complexity 1 21 0 830 220 62 0 chr2 24292810 24292987 -228963596 - AluJo SINE Alu -113 199 12 23 33 0 0 chr2 24293493 24293523 -228963060 + AT_rich Low_complexity Low_complexity 1 30 0 566 251 36 18 chr2 24293611 24293778 -228962805 + MIR SINE MIR 10 179 -83 1443 210 48 7 chr2 24293784 24294079 -228962504 - AluJo SINE Alu -5 307 1 2285 109 0 10 chr2 24294156 24294469 -228962114 + AluSx SINE Alu 1 310 -2 2775 179 88 37 chr2 24294477 24294917 -228961666 - MER68 LTR ERV1 0 562 89 2517 62 0 13 chr2 24294917 24295225 -228961358 + AluY SINE Alu 1 304 -7 2775 179 88 37 chr2 24295225 24295319 -228961264 - MER68 LTR ERV1 -473 89 1 783 200 0 7 chr2 24295379 24295529 -228961054 - L1MB8 LINE L1 -6 6172 6024 1731 158 3 10 chr2 24295686 24295977 -228960606 - AluSx SINE Alu -23 289 1 856 101 0 54 chr2 24295980 24296128 -228960455 - L1MB8 LINE L1 -211 5967 5828 2411 98 0 0 chr2 24296139 24296445 -228960138 - AluSq SINE Alu -7 306 1 2396 98 0 0 chr2 24296589 24296895 -228959688 - AluSc SINE Alu -3 306 1 2378 90 0 3 chr2 24296895 24297195 -228959388 - AluSx SINE Alu -13 299 1 563 156 24 102 chr2 24297418 24297564 -228959019 + L1MB1 LINE L1 5172 5305 -841 2344 97 45 87 chr2 24297564 24297644 -228958939 - THE1B LTR MaLR 0 364 282 2300 89 3 16 chr2 24297644 24297958 -228958625 - AluSp SINE Alu -2 311 2 2344 97 45 87 chr2 24297958 24298257 -228958326 - THE1B LTR MaLR -82 282 1 563 156 24 102 chr2 24298257 24298277 -228958306 + L1MB1 LINE L1 5305 5325 -821 1525 90 0 0 chr2 24298285 24298474 -228958109 + AluSg SINE Alu 2 190 -120 425 125 0 50 chr2 24298474 24298554 -228958029 + AluSg SINE Alu 236 311 -1 1746 127 71 56 chr2 24298556 24298896 -228957687 + L1MB1 LINE L1 5335 5679 -655 1676 178 3 23 chr2 24298896 24299200 -228957383 + AluJo SINE Alu 1 298 -14 1344 150 0 31 chr2 24299211 24299266 -228957317 + L1MB1 LINE L1 5758 5813 -355 2340 89 3 0 chr2 24299266 24299559 -228957024 - AluSp SINE Alu -19 294 1 1344 150 0 31 chr2 24299559 24299823 -228956760 + L1MB1 LINE L1 5813 6167 -1 785 200 15 0 chr2 24299912 24300047 -228956536 + AluJb SINE Alu 2 138 -174 1162 133 0 17 chr2 24300057 24300230 -228956353 - AluJo SINE Alu -142 170 1 3194 249 19 8 chr2 24300230 24301078 -228955505 - L1M4 LINE L1 -1959 4187 3331 2297 92 7 0 chr2 24301189 24301484 -228955099 - AluSc SINE Alu -12 297 1 2630 52 3 0 chr2 24301493 24301800 -228954783 - AluY SINE Alu -3 308 1 1648 157 63 20 chr2 24301808 24302107 -228954476 - AluJb SINE Alu 0 312 1 238 103 0 69 chr2 24302141 24302199 -228954384 + (CTACT)n Simple_repeat Simple_repeat 4 57 0 212 130 0 130 chr2 24302252 24302298 -228954285 + L2 LINE L2 3267 3306 -7 472 301 128 9 chr2 24302508 24302734 -228953849 - MIR SINE MIR -8 254 2 736 158 127 70 chr2 24302980 24303138 -228953445 - FAM SINE Alu -4 171 5 872 215 98 5 chr2 24303165 24303370 -228953213 + MIR SINE MIR 1 224 -38 2299 81 10 3 chr2 24303445 24303740 -228952843 + AluY SINE Alu 2 298 -13 2482 91 0 0 chr2 24303932 24304241 -228952342 - AluSc SINE Alu 0 309 1 1340 181 35 86 chr2 24304305 24304443 -228952140 + AluJo SINE Alu 1 144 -168 2026 119 0 0 chr2 24304443 24304711 -228951872 - AluSc SINE Alu -41 268 1 1340 181 35 86 chr2 24304711 24304887 -228951696 + AluJo SINE Alu 144 299 -13 1643 182 26 13 chr2 24305060 24305362 -228951221 + AluJb SINE Alu 1 306 -6 815 178 8 130 chr2 24305386 24305552 -228951031 + MER20 DNA MER1_type 1 129 -90 3572 116 44 31 chr2 24305552 24306070 -228950513 - MER1A DNA MER1_type 0 527 3 815 178 8 130 chr2 24306070 24306150 -228950433 + MER20 DNA MER1_type 129 217 -2 302 197 66 123 chr2 24306519 24306549 -228950034 + Charlie1a DNA MER1_type 49 79 -2682 1710 156 4 7 chr2 24306549 24306825 -228949758 - AluJo SINE Alu -22 290 16 302 197 66 123 chr2 24306825 24306884 -228949699 + Charlie1a DNA MER1_type 79 132 -2629 1811 138 4 4 chr2 24306884 24307145 -228949438 + AluJo SINE Alu 18 278 -34 302 197 66 123 chr2 24307145 24307176 -228949407 + Charlie1a DNA MER1_type 132 163 -1292 1799 186 65 71 chr2 24307177 24307284 -228949299 + Charlie1a DNA MER1_type 112 218 -2543 1036 178 113 14 chr2 24307284 24307497 -228949086 + MER46A DNA MER2_type 3 236 0 1799 186 65 71 chr2 24307497 24307592 -228948991 + Charlie1a DNA MER1_type 218 312 -2449 2359 88 0 0 chr2 24307592 24307888 -228948695 + AluSg SINE Alu 1 296 -14 1799 186 65 71 chr2 24307888 24308098 -228948485 + Charlie1a DNA MER1_type 312 522 -2239 2052 104 4 4 chr2 24308098 24308368 -228948215 - AluSg SINE Alu -40 270 1 2408 90 0 6 chr2 24308377 24308689 -228947894 - AluY SINE Alu -1 310 1 2231 97 10 0 chr2 24308689 24308979 -228947604 - AluSg SINE Alu -17 293 1 1799 186 65 71 chr2 24308979 24309048 -228947535 + Charlie1a DNA MER1_type 528 603 -852 2126 107 10 0 chr2 24309276 24309567 -228947016 + AluSx SINE Alu 1 294 -18 2501 70 0 3 chr2 24309569 24309881 -228946702 + AluY SINE Alu 1 311 0 242 324 86 0 chr2 24310068 24310173 -228946410 - MARNA DNA Mariner -77 509 396 * 764 304 79 22 chr2 24310111 24310479 -228946104 + MARNA DNA Mariner 125 513 -73 2297 107 3 0 chr2 24310657 24310956 -228945627 - AluSx SINE Alu -12 300 1 1888 119 22 53 chr2 24311121 24311439 -228945144 - AluSx SINE Alu -4 308 1 2528 44 0 3 chr2 24311801 24312098 -228944485 - AluY SINE Alu -13 298 3 2192 133 7 0 chr2 24312098 24312406 -228944177 - AluSx SINE Alu -2 310 1 25 31 0 0 chr2 24312617 24312649 -228943934 + AT_rich Low_complexity Low_complexity 1 32 0 1621 153 41 24 chr2 24313304 24313599 -228942984 - AluJo SINE Alu -12 300 1 2107 108 54 0 chr2 24313836 24314132 -228942451 + AluSp SINE Alu 1 312 -1 26 50 0 0 chr2 24314786 24314826 -228941757 + AT_rich Low_complexity Low_complexity 1 40 0 2023 109 10 30 chr2 24315673 24315977 -228940606 + AluSx SINE Alu 1 298 -14 4117 226 90 14 chr2 24316212 24316491 -228940092 - L1MC4 LINE L1 -191 7851 7595 1658 117 78 32 chr2 24316491 24316773 -228939810 + AluSx SINE Alu 1 295 -17 4117 226 90 14 chr2 24316773 24317610 -228938973 - L1MC4 LINE L1 -447 7595 6650 1400 187 97 4 chr2 24317611 24317879 -228938704 - AluJo SINE Alu -19 293 1 2370 166 37 21 chr2 24317881 24318309 -228938274 + MER4E LTR ERV1 343 777 -2 1467 162 29 76 chr2 24318357 24318503 -228938080 + AluJo SINE Alu 1 126 -186 2198 94 11 0 chr2 24318503 24318790 -228937793 + AluSq SINE Alu 1 290 -23 1467 162 29 76 chr2 24318790 24318958 -228937625 + AluJo SINE Alu 126 300 -12 2218 121 0 0 chr2 24319225 24319523 -228937060 - AluSg SINE Alu -10 300 3 2308 88 20 7 chr2 24319546 24319852 -228936731 - AluSg SINE Alu 0 310 1 620 165 55 0 chr2 24319859 24320002 -228936581 - FLAM_C SINE Alu 0 150 2 184 375 0 0 chr2 24320046 24320110 -228936473 - L3 LINE CR1 -7 1570 1507 547 238 156 31 chr2 24320117 24320277 -228936306 + MER5A DNA MER1_type 9 188 -1 22 0 0 0 chr2 24321261 24321283 -228935300 + AT_rich Low_complexity Low_complexity 1 22 0 288 221 168 0 chr2 24321302 24321397 -228935186 + MER103 DNA DNA 6 116 -50 319 283 201 19 chr2 24321662 24321821 -228934762 + MER5A DNA MER1_type 2 189 0 217 270 162 0 chr2 24322334 24322408 -228934175 - L2 LINE L2 -5 3267 3182 734 174 17 0 chr2 24322420 24322559 -228934024 + FLAM_C SINE Alu 1 141 0 1711 166 11 7 chr2 24322591 24322906 -228933677 + AluJo SINE Alu 1 316 0 300 53 0 0 chr2 24323576 24323614 -228932969 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1795 177 3 22 chr2 24324872 24325183 -228931400 + AluJb SINE Alu 1 305 -7 227 290 178 37 chr2 24325413 24325520 -228931063 - L2 LINE L2 0 3272 3151 318 231 111 60 chr2 24325571 24325688 -228930895 + L1ME LINE L1 5541 5637 -484 2129 117 0 13 chr2 24325691 24325991 -228930592 + AluSx SINE Alu 1 296 -16 1048 39 0 0 chr2 24326113 24326242 -228930341 - L1P LINE L1 -3471 2675 2547 15493 30 12 1 chr2 24326242 24328781 -228927802 + L1PA3 LINE L1 3628 6155 0 954 161 8 4 chr2 24328841 24329049 -228927534 + AluJb SINE Alu 2 286 -26 315 267 70 0 chr2 24329054 24329140 -228927443 - L1MC4 LINE L1 -1339 6703 6612 1660 179 19 16 chr2 24329489 24329796 -228926787 - AluJo SINE Alu 0 312 5 2391 86 3 3 chr2 24329810 24330114 -228926469 - AluSp SINE Alu -9 304 1 2075 125 3 0 chr2 24330222 24330510 -228926073 + AluSx SINE Alu 1 289 -23 2201 93 24 0 chr2 24330580 24330870 -228925713 + AluSp SINE Alu 1 297 -16 1895 176 3 3 chr2 24330907 24331219 -228925364 + AluJb SINE Alu 1 312 0 180 77 0 0 chr2 24331231 24331257 -228925326 + (AGGGGG)n Simple_repeat Simple_repeat 5 30 0 2213 116 0 7 chr2 24331335 24331629 -228924954 + AluSx SINE Alu 9 300 -12 994 233 43 16 chr2 24331640 24331849 -228924734 + L1M4 LINE L1 2627 2848 -3298 1732 161 16 48 chr2 24331849 24332165 -228924418 + AluJo SINE Alu 1 306 -6 994 233 43 16 chr2 24332165 24332260 -228924323 + L1M4 LINE L1 2848 2939 -3207 1916 142 0 17 chr2 24332343 24332655 -228923928 + AluSx SINE Alu 1 307 0 2342 89 7 13 chr2 24332988 24333292 -228923291 + AluSx SINE Alu 1 302 -10 834 142 14 7 chr2 24333467 24333608 -228922975 + FRAM SINE Alu 13 154 -22 523 145 161 40 chr2 24333623 24333747 -228922836 + FLAM_C SINE Alu 3 141 -2 236 229 0 0 chr2 24333902 24333950 -228922633 - MER112 DNA MER1_type -183 77 30 338 317 114 46 chr2 24334126 24334192 -228922391 + L1ME3A LINE L1 5461 5521 -649 2394 56 7 13 chr2 24334192 24334494 -228922089 + AluY SINE Alu 1 300 -11 338 317 114 46 chr2 24334494 24334821 -228921762 + L1ME3A LINE L1 5521 5881 -289 244 175 0 0 chr2 24334990 24335030 -228921553 + MER94 DNA DNA 95 134 0 400 211 54 21 chr2 24335104 24335214 -228921369 - FRAM/FAM SINE Alu -93 73 1 2365 88 10 3 chr2 24335218 24335525 -228921058 - AluSg SINE Alu -1 309 1 216 254 91 55 chr2 24336521 24336631 -228919952 + L2 LINE L2 3113 3226 -46 233 211 88 0 chr2 24336663 24336720 -228919863 - MER91C DNA MER1_type -38 102 41 181 245 0 38 chr2 24336736 24336789 -228919794 - L2 LINE L2 -80 3233 3183 195 42 0 0 chr2 24336804 24336828 -228919755 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 733 180 0 8 chr2 24337280 24337408 -228919175 + FLAM_A SINE Alu 1 127 -6 2206 93 40 0 chr2 24337411 24337712 -228918871 + AluSp SINE Alu 1 313 0 1639 185 7 20 chr2 24337719 24338011 -228918572 + AluJo SINE Alu 1 288 -24 207 265 0 0 chr2 24338048 24338116 -228918467 + A-rich Low_complexity Low_complexity 3 70 0 417 261 111 13 chr2 24338481 24338634 -228917949 + MIR SINE MIR 89 256 -6 752 194 0 0 chr2 24338696 24338820 -228917763 + FLAM_C SINE Alu 2 125 -18 1798 160 32 0 chr2 24338906 24339187 -228917396 + AluJb SINE Alu 1 290 -22 2140 130 0 7 chr2 24339195 24339496 -228917087 + AluSq SINE Alu 1 299 -14 2174 118 0 0 chr2 24339503 24339800 -228916783 + AluSx SINE Alu 1 297 -15 187 308 128 0 chr2 24339802 24339880 -228916703 - L2 LINE L2 -18 3295 3208 398 215 0 114 chr2 24340134 24340283 -228916300 - L2 LINE L2 0 3313 3182 1716 182 3 3 chr2 24340557 24340864 -228915719 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr2 24341670 24341696 -228914887 + AT_rich Low_complexity Low_complexity 1 26 0 415 236 9 0 chr2 24342152 24342258 -228914325 + L1MA10 LINE L1 5198 5304 -842 427 120 213 0 chr2 24342275 24342350 -228914233 + FRAM SINE Alu 71 161 -15 4336 156 64 42 chr2 24342375 24343285 -228913298 + L1MA10 LINE L1 5376 6305 -29 2469 43 7 3 chr2 24343534 24343835 -228912748 + AluY SINE Alu 1 302 -9 2149 135 0 0 chr2 24347517 24347875 -228908708 + AluSx SINE Alu 1 358 0 2368 80 0 3 chr2 24347930 24348218 -228908365 + AluSx SINE Alu 14 300 -12 748 148 16 0 chr2 24348632 24348754 -228907829 + FLAM_C SINE Alu 2 125 -18 880 143 0 0 chr2 24348764 24348890 -228907693 - AluJb SINE Alu -30 282 157 799 166 13 38 chr2 24348895 24349052 -228907531 + AluJb SINE Alu 154 306 -6 2325 96 3 3 chr2 24349057 24349359 -228907224 + AluSq SINE Alu 5 306 -7 2215 112 0 0 chr2 24349515 24349809 -228906774 - AluY SINE Alu -15 296 3 503 103 0 0 chr2 24349841 24349909 -228906674 + FLAM SINE Alu 63 130 -13 961 188 102 109 chr2 24350200 24350504 -228906079 + AluJo SINE Alu 1 302 0 1661 141 58 14 chr2 24350508 24350785 -228905798 + AluSg1 SINE Alu 1 289 -20 1789 158 23 16 chr2 24350789 24351093 -228905490 + AluSx SINE Alu 1 306 -6 2307 112 0 0 chr2 24351354 24351658 -228904925 + AluSg SINE Alu 1 304 -6 2133 122 0 29 chr2 24351661 24351972 -228904611 + AluSg SINE Alu 1 302 -8 343 367 100 4 chr2 24352197 24352437 -228904146 + L1MEd LINE L1 459 721 -5398 2152 107 3 3 chr2 24352449 24352740 -228903843 + AluY SINE Alu 3 293 -18 22 0 0 0 chr2 24352740 24352762 -228903821 + AT_rich Low_complexity Low_complexity 1 22 0 2377 103 3 0 chr2 24352848 24353160 -228903423 + AluSp SINE Alu 1 313 0 1122 166 6 0 chr2 24353194 24353375 -228903208 + FRAM SINE Alu 1 176 0 2269 99 17 0 chr2 24353557 24353851 -228902732 + AluSx SINE Alu 1 299 -13 947 159 143 0 chr2 24353869 24354051 -228902532 - MER3 DNA MER1_type -1 208 1 2240 123 0 3 chr2 24354415 24354717 -228901866 + AluSx SINE Alu 1 301 -11 3277 166 25 86 chr2 24354717 24355392 -228901191 + L1MB4 LINE L1 4996 5711 -469 1902 131 7 7 chr2 24355392 24355705 -228900878 + AluSx SINE Alu 2 314 0 3277 166 25 86 chr2 24355705 24356051 -228900532 + L1MB4 LINE L1 5711 5954 -226 727 193 0 15 chr2 24356051 24356186 -228900397 + FLAM_C SINE Alu 1 133 0 3277 166 25 86 chr2 24356186 24356231 -228900352 + L1MB4 LINE L1 5954 6000 -180 491 179 0 21 chr2 24356251 24356346 -228900237 + L1M4 LINE L1 4012 4104 -2042 2309 90 0 0 chr2 24356346 24356634 -228899949 - AluSx SINE Alu -24 288 1 824 168 0 28 chr2 24356640 24356783 -228899800 - FLAM_C SINE Alu -4 139 1 597 141 0 0 chr2 24356787 24356886 -228899697 + L1M4 LINE L1 4103 4201 -1945 1206 180 18 40 chr2 24356886 24357108 -228899475 + AluJo SINE Alu 1 217 -95 2192 169 57 132 chr2 24357146 24357387 -228899196 + L1M4 LINE L1 4258 4516 -1630 2067 136 48 3 chr2 24357387 24357717 -228898866 - MER7A DNA MER2_type -2 344 2 2192 169 57 132 chr2 24357717 24357807 -228898776 + L1M4 LINE L1 4516 4611 -1535 2343 102 0 0 chr2 24357807 24358100 -228898483 + AluSp SINE Alu 1 293 -20 2192 169 57 132 chr2 24358100 24358487 -228898096 + L1M4 LINE L1 4611 4923 -1223 422 174 0 23 chr2 24358720 24358806 -228897777 - MER92B LTR ERV1 -7 629 546 279 186 51 0 chr2 24358810 24358869 -228897714 - MER92B LTR ERV1 -50 586 525 * 1605 198 46 85 chr2 24358865 24359451 -228897132 - MER92B LTR ERV1 -4 632 70 1985 54 8 0 chr2 24359451 24359692 -228896891 + AluSq SINE Alu 1 243 -70 21 36 0 0 chr2 24360057 24360085 -228896498 + AT_rich Low_complexity Low_complexity 1 28 0 205 309 203 8 chr2 24360107 24360230 -228896353 - L2 LINE L2 -5 3267 3121 2088 117 0 23 chr2 24360233 24360542 -228896041 + AluSx SINE Alu 1 302 -10 187 298 110 53 chr2 24360634 24360862 -228895721 - L2 LINE L2 -216 3056 2816 2285 97 17 0 chr2 24360862 24361161 -228895422 - AluSx SINE Alu -8 304 1 2172 91 28 3 chr2 24361410 24361697 -228894886 - AluSg SINE Alu -16 294 1 357 277 208 0 chr2 24361701 24361831 -228894752 - L2 LINE L2 -604 2710 2554 2056 137 3 13 chr2 24361934 24362233 -228894350 - AluSp SINE Alu -17 296 1 25 0 0 0 chr2 24364222 24364247 -228892336 + AT_rich Low_complexity Low_complexity 1 25 0 2031 146 0 19 chr2 24364258 24364574 -228892009 - AluSx SINE Alu -2 310 1 222 37 0 0 chr2 24364586 24364613 -228891970 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1969 131 7 14 chr2 24364615 24364763 -228891820 - AluSx SINE Alu -31 281 134 2080 110 33 10 chr2 24364763 24365063 -228891520 - AluSc SINE Alu -2 307 1 1969 131 7 14 chr2 24365063 24365197 -228891386 - AluSx SINE Alu -178 134 1 1718 193 7 3 chr2 24365330 24365631 -228890952 - AluJo SINE Alu -10 302 1 2251 104 0 10 chr2 24366289 24366597 -228889986 - AluSq SINE Alu -8 305 1 2410 84 3 0 chr2 24366685 24366981 -228889602 - AluSq SINE Alu -2 311 15 379 296 64 0 chr2 24367071 24367196 -228889387 - MIR SINE MIR -74 188 56 2048 108 13 67 chr2 24367388 24367704 -228888879 - AluSx SINE Alu -13 299 1 1850 122 84 3 chr2 24367733 24368020 -228888563 + AluY SINE Alu 2 311 0 2198 125 0 0 chr2 24368035 24368330 -228888253 + AluSx SINE Alu 1 295 -17 496 187 0 0 chr2 24368330 24368421 -228888162 - L1PB4 LINE L1 -5 6151 6061 923 75 8 8 chr2 24368521 24368641 -228887942 - AluY SINE Alu -191 120 1 2365 67 0 20 chr2 24368670 24368970 -228887613 - AluY SINE Alu -17 294 1 1788 219 45 36 chr2 24368980 24369020 -228887563 + Charlie1 DNA MER1_type 1936 1974 -787 2038 152 7 3 chr2 24369020 24369329 -228887254 + AluSx SINE Alu 1 310 -2 1788 219 45 36 chr2 24369329 24369841 -228886742 + Charlie1 DNA MER1_type 1974 2493 -268 763 264 57 24 chr2 24369911 24369961 -228886622 - HAL1 LINE L1 -56 2451 2404 2059 118 45 0 chr2 24369961 24370250 -228886333 - AluSp SINE Alu -11 302 1 763 264 57 24 chr2 24370250 24370533 -228886050 - HAL1 LINE L1 -103 2404 2107 2231 84 99 0 chr2 24370746 24371069 -228885514 - THE1A LTR MaLR 0 355 1 875 137 8 0 chr2 24371073 24371204 -228885379 - FLAM_C SINE Alu -11 132 1 1132 188 144 0 chr2 24371406 24371662 -228884921 + AluJo SINE Alu 2 294 -8 2175 112 7 7 chr2 24371686 24371989 -228884594 + AluSp SINE Alu 5 307 -6 1941 151 14 0 chr2 24372160 24372451 -228884132 - AluSx SINE Alu -17 295 1 368 120 0 0 chr2 24372617 24372667 -228883916 + MER57A LTR ERV1 295 344 -59 2457 67 0 32 chr2 24372686 24373001 -228883582 + AluY SINE Alu 2 306 -5 2144 116 0 3 chr2 24373005 24373299 -228883284 + AluSg SINE Alu 1 293 -17 2226 101 7 7 chr2 24373386 24373682 -228882901 + AluSx SINE Alu 1 296 -16 286 289 0 30 chr2 24373684 24373819 -228882764 - L1ME4a LINE L1 -80 6041 5911 1603 178 0 8 chr2 24373935 24374194 -228882389 - AluJo SINE Alu -55 257 1 683 171 48 115 chr2 24374257 24374509 -228882074 - L1MB7 LINE L1 -5 6179 5945 2400 152 38 22 chr2 24374539 24374937 -228881646 - L1ME4a LINE L1 -448 5736 5322 2100 121 4 0 chr2 24374937 24375250 -228881333 - AluSx SINE Alu 0 314 1 2400 152 38 22 chr2 24375250 24375379 -228881204 - L1ME4a LINE L1 -862 5322 5197 1663 171 19 47 chr2 24375510 24375831 -228880752 + AluJo SINE Alu 1 312 0 2130 111 21 0 chr2 24375935 24376223 -228880360 + AluJb SINE Alu 1 294 -18 1178 95 24 86 chr2 24376241 24376403 -228880180 + MER30 DNA MER1_type 1 149 -81 2425 63 0 27 chr2 24376403 24376704 -228879879 + AluY SINE Alu 3 295 -16 1178 95 24 86 chr2 24376704 24376751 -228879832 + MER30 DNA MER1_type 149 197 -33 808 132 66 0 chr2 24376841 24376962 -228879621 + FLAM_C SINE Alu 5 133 -10 2481 74 0 3 chr2 24377547 24377844 -228878739 + AluSp SINE Alu 1 296 -17 2282 112 0 0 chr2 24378004 24378299 -228878284 - AluSx SINE Alu -17 295 1 28 48 0 0 chr2 24378912 24378954 -228877629 + AT_rich Low_complexity Low_complexity 1 42 0 1446 170 3 113 chr2 24379232 24379561 -228877022 - AluJo SINE Alu -9 293 1 2167 117 0 10 chr2 24379566 24379875 -228876708 - AluSx SINE Alu -6 306 1 462 97 0 0 chr2 24379926 24379988 -228876595 - Alu SINE Alu -15 297 236 1614 172 46 14 chr2 24380037 24380322 -228876261 + AluJb SINE Alu 1 294 -18 2459 52 0 7 chr2 24380350 24380667 -228875916 + AluY SINE Alu 1 315 0 23 54 0 0 chr2 24380737 24380774 -228875809 + AT_rich Low_complexity Low_complexity 1 37 0 311 194 78 10 chr2 24380822 24380925 -228875658 - L1ME4a LINE L1 -48 6073 5964 2357 92 10 0 chr2 24380937 24381231 -228875352 - AluSx SINE Alu -15 297 1 914 162 0 103 chr2 24381248 24381433 -228875150 + AluJb SINE Alu 134 299 -13 24 32 0 0 chr2 24381482 24381513 -228875070 + AT_rich Low_complexity Low_complexity 1 31 0 2511 72 0 0 chr2 24381820 24382124 -228874459 + AluY SINE Alu 1 304 -7 2228 129 0 3 chr2 24382165 24382474 -228874109 + AluSg SINE Alu 1 308 -2 1773 242 121 4 chr2 24382475 24383038 -228873545 - L1MC4 LINE L1 -142 7900 7272 180 0 0 0 chr2 24383068 24383088 -228873495 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 1069 278 125 3 chr2 24383101 24383446 -228873137 - L1MC4 LINE L1 -985 7057 6671 551 93 52 10 chr2 24383457 24383554 -228873029 + L1 LINE L1 3589 3689 -2457 186 43 0 0 chr2 24383570 24383593 -228872990 + (TG)n Simple_repeat Simple_repeat 2 24 0 712 139 0 6 chr2 24383622 24383862 -228872721 - AluJb SINE Alu -7 305 15 266 132 0 8 chr2 24383963 24384148 -228872435 - AluJb SINE Alu -66 236 1 489 257 29 40 chr2 24384155 24384216 -228872367 - L1MC4 LINE L1 -1414 6628 6568 1825 155 0 7 chr2 24384216 24384506 -228872077 + AluJb SINE Alu 1 288 -24 489 257 29 40 chr2 24384506 24384620 -228871963 - L1MC4 LINE L1 -1474 6568 6443 2076 105 0 23 chr2 24385080 24385384 -228871199 + AluSx SINE Alu 1 297 -15 394 216 108 0 chr2 24385391 24385502 -228871081 + L1ME3A LINE L1 5827 5949 -221 478 266 35 6 chr2 24385720 24385889 -228870694 - L1MCa LINE L1 -3558 2868 2695 316 179 107 24 chr2 24385891 24385975 -228870608 - MER34C LTR ERV1 0 585 495 28 0 0 26 chr2 24385983 24386002 -228870581 + AT_rich Low_complexity Low_complexity 1 19 -19 237 65 0 0 chr2 24386002 24386033 -228870550 + (CA)n Simple_repeat Simple_repeat 2 32 0 28 0 0 26 chr2 24386033 24386052 -228870531 + AT_rich Low_complexity Low_complexity 19 38 0 1995 124 3 13 chr2 24386052 24386367 -228870216 - AluSx SINE Alu 0 312 1 184 29 29 29 chr2 24386369 24386403 -228870180 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1417 103 9 60 chr2 24386403 24386563 -228870020 - AluSg/x SINE Alu -27 285 139 2322 80 0 0 chr2 24386563 24386865 -228869718 - AluSc SINE Alu -7 302 1 1417 103 9 60 chr2 24386865 24386937 -228869646 - AluSg/x SINE Alu -173 139 65 818 204 38 80 chr2 24386937 24387201 -228869382 - MER39 LTR ERV1 -188 519 267 240 238 37 32 chr2 24387177 24387279 -228869304 - MER39 LTR ERV1 -538 106 6 * 636 239 32 40 chr2 24387284 24387531 -228869052 - L1MCa LINE L1 -3730 2696 2452 22 0 0 0 chr2 24388000 24388022 -228868561 + AT_rich Low_complexity Low_complexity 1 22 0 238 139 0 0 chr2 24388042 24388078 -228868505 - Alu SINE Alu -266 36 1 1945 120 16 13 chr2 24388270 24388579 -228868004 - AluSg SINE Alu 0 310 1 431 267 120 45 chr2 24388602 24389230 -228867353 - L1MCa LINE L1 -4564 1862 1129 238 210 16 32 chr2 24389851 24389913 -228866670 - L1MCa LINE L1 -5855 561 501 343 150 100 25 chr2 24389972 24390034 -228866549 - Tigger5 DNA MER2_type -1 2322 2251 2229 57 0 7 chr2 24390034 24390316 -228866267 + AluY SINE Alu 30 309 -2 343 150 100 25 chr2 24390316 24390333 -228866250 - Tigger5 DNA MER2_type -72 2251 2237 23 33 0 0 chr2 24390479 24390509 -228866074 + AT_rich Low_complexity Low_complexity 1 30 0 1098 139 0 17 chr2 24390622 24390802 -228865781 - AluSg/x SINE Alu -2 310 134 2108 116 3 3 chr2 24390802 24391103 -228865480 - AluSx SINE Alu -11 301 1 2334 91 7 0 chr2 24391200 24391509 -228865074 - AluSq SINE Alu 0 313 3 1727 142 35 10 chr2 24391511 24391821 -228864762 - 7SLRNA srpRNA srpRNA -1 319 2 801 158 0 0 chr2 24391826 24391946 -228864637 - FLAM_C SINE Alu -11 132 13 305 267 46 53 chr2 24391946 24392077 -228864506 - L1M4 LINE L1 -2879 3267 3138 2117 79 14 4 chr2 24392175 24392482 -228864101 - AluSc SINE Alu 0 310 1 2208 110 3 0 chr2 24392547 24392848 -228863735 - AluSq SINE Alu -11 302 1 343 276 151 5 chr2 24392977 24393169 -228863414 - L2 LINE L2 -5 3308 3089 2032 114 3 7 chr2 24393174 24393473 -228863110 + AluSx SINE Alu 1 298 -14 640 194 16 23 chr2 24393473 24393602 -228862981 - AluSg/x SINE Alu -19 291 164 502 194 83 0 chr2 24393862 24393970 -228862613 + HsTC2 DNA Tc2 2 118 -1780 657 199 107 0 chr2 24394176 24394307 -228862276 + FRAM SINE Alu 2 146 -30 1910 129 0 0 chr2 24394998 24395311 -228861272 + AluSc SINE Alu 1 313 0 725 175 0 8 chr2 24395319 24395439 -228861144 + FLAM_C SINE Alu 2 120 -23 26 30 0 0 chr2 24395439 24395472 -228861111 + AT_rich Low_complexity Low_complexity 1 33 0 2119 111 7 0 chr2 24395720 24396026 -228860557 - AluSp SINE Alu -5 308 1 48 0 0 0 chr2 24396365 24396413 -228860170 + AT_rich Low_complexity Low_complexity 1 48 0 2024 96 7 10 chr2 24396414 24396706 -228859877 + AluSc SINE Alu 1 291 -18 866 134 15 0 chr2 24396729 24396863 -228859720 + AluJb SINE Alu 1 136 -176 1884 136 0 0 chr2 24396863 24397135 -228859448 + AluSx SINE Alu 7 278 -34 1999 110 10 0 chr2 24397151 24397443 -228859140 - AluSq SINE Alu -18 295 1 1201 198 87 7 chr2 24397443 24397731 -228858852 - Charlie1b DNA MER1_type -208 315 5 375 269 85 21 chr2 24397754 24397895 -228858688 - MER5B DNA MER1_type 0 178 29 180 0 0 0 chr2 24398458 24398478 -228858105 + (A)n Simple_repeat Simple_repeat 1 20 0 2250 90 0 3 chr2 24399107 24399407 -228857176 + AluSc SINE Alu 1 299 -10 1008 162 131 22 chr2 24400125 24400347 -228856236 + 7SLRNA srpRNA srpRNA 11 256 -64 2228 110 0 0 chr2 24400369 24400678 -228855905 + AluSg SINE Alu 1 309 -1 2310 87 0 3 chr2 24400940 24401240 -228855343 - AluSq SINE Alu -14 299 1 679 203 0 8 chr2 24401396 24401529 -228855054 + FLAM_C SINE Alu 2 133 0 908 240 110 16 chr2 24401732 24401978 -228854605 - MLT1J LTR MaLR 0 511 243 3702 160 113 57 chr2 24401991 24402065 -228854518 - L1MB8 LINE L1 -1 6177 6109 1954 90 42 3 chr2 24402065 24402353 -228854230 + AluSx SINE Alu 9 307 -5 3702 160 113 57 chr2 24402353 24403343 -228853240 - L1MB8 LINE L1 -69 6109 5043 1188 102 0 0 chr2 24403355 24403521 -228853062 - AluSg/x SINE Alu -8 304 139 3862 155 45 31 chr2 24403592 24404310 -228852273 - MER50 LTR ERV1 0 734 7 344 215 41 50 chr2 24404312 24404433 -228852150 - MLT1J LTR MaLR -286 225 106 848 161 7 7 chr2 24405728 24405877 -228850706 - MER5A DNA MER1_type -27 162 14 2396 81 0 0 chr2 24405936 24406245 -228850338 + AluSx SINE Alu 1 309 -3 824 161 67 0 chr2 24407233 24407382 -228849201 - AluJo SINE Alu -33 279 121 21 0 0 0 chr2 24407382 24407403 -228849180 + AT_rich Low_complexity Low_complexity 1 21 0 653 135 31 0 chr2 24407410 24407506 -228849077 - U6 snRNA snRNA -5 102 4 787 181 0 21 chr2 24407506 24407650 -228848933 - AluJo SINE Alu -168 144 4 325 98 0 33 chr2 24407651 24407712 -228848871 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 2224 96 3 0 chr2 24407723 24408024 -228848559 - AluSx SINE Alu -10 302 1 292 336 52 0 chr2 24408071 24408205 -228848378 + L2 LINE L2 2431 2571 -743 216 0 0 0 chr2 24408502 24408526 -228848057 + (T)n Simple_repeat Simple_repeat 1 24 0 1861 114 11 0 chr2 24408785 24409049 -228847534 + AluSx SINE Alu 9 275 -37 302 327 30 35 chr2 24409574 24409773 -228846810 - L2 LINE L2 -1334 1980 1783 1543 169 19 50 chr2 24412141 24412461 -228844122 - AluJb SINE Alu -2 310 1 2013 128 3 6 chr2 24412471 24412783 -228843800 - AluSx SINE Alu -1 311 1 375 252 43 142 chr2 24412812 24413114 -228843469 - L1MC4a LINE L1 -1756 6052 5781 1210 65 126 75 chr2 24413116 24413167 -228843416 + MER30 DNA MER1_type 6 53 -177 2193 89 0 38 chr2 24413167 24413309 -228843274 + AluSx SINE Alu 1 147 -165 2139 106 3 7 chr2 24413309 24413612 -228842971 + AluSg SINE Alu 1 302 -8 2193 89 0 38 chr2 24413612 24413785 -228842798 + AluSx SINE Alu 147 304 -8 1210 65 126 75 chr2 24413785 24413947 -228842636 + MER30 DNA MER1_type 53 230 0 242 291 36 45 chr2 24413948 24414058 -228842525 - L1MC4a LINE L1 -372 5798 5690 476 266 25 14 chr2 24414626 24414791 -228841792 + MIR SINE MIR 33 198 -64 354 283 114 33 chr2 24414792 24414976 -228841607 + L2 LINE L2 2278 2476 -838 876 262 97 83 chr2 24414977 24415083 -228841500 + L2 LINE L2 2597 2700 -572 1677 139 12 0 chr2 24415083 24415342 -228841241 + AluSx SINE Alu 7 268 -44 180 0 0 0 chr2 24415350 24415370 -228841213 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 876 262 97 83 chr2 24415370 24415440 -228841143 + L2 LINE L2 2706 2774 -498 261 0 0 0 chr2 24415440 24415469 -228841114 + (TG)n Simple_repeat Simple_repeat 2 30 0 207 0 0 0 chr2 24415469 24415492 -228841091 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 876 262 97 83 chr2 24415492 24415956 -228840627 + L2 LINE L2 2773 3272 0 755 142 0 71 chr2 24416661 24416802 -228839781 - FLAM_C SINE Alu -2 131 1 1893 139 0 7 chr2 24416810 24417112 -228839471 - AluSx SINE Alu -10 302 3 2306 77 3 3 chr2 24417115 24417415 -228839168 - AluSp SINE Alu -13 300 1 2164 94 0 13 chr2 24417443 24417606 -228838977 - AluSp SINE Alu -17 296 137 2475 53 3 0 chr2 24417606 24417910 -228838673 - AluY SINE Alu -6 305 1 2164 94 0 13 chr2 24417910 24418044 -228838539 - AluSp SINE Alu -176 137 3 2155 73 0 17 chr2 24418284 24418572 -228838011 - AluSq SINE Alu -7 306 24 2183 110 0 3 chr2 24418811 24419110 -228837473 - AluSx SINE Alu -14 298 1 2017 142 3 0 chr2 24419121 24419432 -228837151 - AluSp SINE Alu -1 312 1 832 258 79 47 chr2 24419789 24420066 -228836517 - L1MC4 LINE L1 0 8042 7775 2198 101 0 10 chr2 24420066 24420372 -228836211 + AluSq SINE Alu 1 303 -10 832 258 79 47 chr2 24420372 24420628 -228835955 - L1MC4 LINE L1 -267 7775 7492 1990 120 17 0 chr2 24422845 24423136 -228833447 + AluSx SINE Alu 2 297 -15 533 295 46 50 chr2 24423454 24423735 -228832848 - L1ME LINE L1 -346 5775 5496 1142 184 0 5 chr2 24423742 24423943 -228832640 - AluJo SINE Alu -112 200 1 1975 108 14 0 chr2 24424058 24424378 -228832205 - AluSc SINE Alu 0 324 1 24 0 0 0 chr2 24424378 24424402 -228832181 + AT_rich Low_complexity Low_complexity 1 24 0 815 136 0 23 chr2 24424402 24424534 -228832049 - FLAM_C SINE Alu -14 129 1 29 0 0 0 chr2 24424543 24424572 -228832011 + AT_rich Low_complexity Low_complexity 1 29 0 550 257 128 16 chr2 24424715 24424964 -228831619 - L1MC4a LINE L1 -1736 6072 5796 357 218 115 109 chr2 24424964 24425129 -228831454 - L1ME4a LINE L1 0 6121 5956 36 40 0 0 chr2 24425140 24425190 -228831393 + AT_rich Low_complexity Low_complexity 1 50 0 24 32 0 0 chr2 24425238 24425269 -228831314 + AT_rich Low_complexity Low_complexity 1 31 0 1787 156 0 7 chr2 24425292 24425593 -228830990 + AluJb SINE Alu 1 299 -13 1908 81 4 0 chr2 24425774 24426021 -228830562 - AluSx SINE Alu -64 248 1 570 168 0 10 chr2 24426256 24426357 -228830226 - FLAM_C SINE Alu -11 132 33 1615 189 3 0 chr2 24426403 24426700 -228829883 - AluSx SINE Alu -14 298 1 1426 180 0 53 chr2 24427477 24427630 -228828953 - AluJo SINE Alu -28 284 124 207 0 0 0 chr2 24427630 24427653 -228828930 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1660 118 59 7 chr2 24427653 24427925 -228828658 - AluSx SINE Alu -26 286 1 1426 180 0 53 chr2 24427925 24428070 -228828513 - AluJo SINE Alu -186 126 1 325 269 104 30 chr2 24428070 24428204 -228828379 - L2 LINE L2 -10 3303 3160 2330 75 0 7 chr2 24428309 24428615 -228827968 - AluSc SINE Alu -5 304 1 666 110 0 0 chr2 24431116 24431207 -228825376 - AluSg/x SINE Alu -150 162 72 2035 112 3 0 chr2 24431360 24431669 -228824914 - AluSx SINE Alu 0 310 1 710 269 41 62 chr2 24431731 24431754 -228824829 - L1M4 LINE L1 -2281 3865 3843 2053 105 10 0 chr2 24431754 24432050 -228824533 - AluSg SINE Alu -11 299 1 710 269 41 62 chr2 24432050 24432199 -228824384 - L1M4 LINE L1 -2303 3843 3692 1711 160 3 10 chr2 24432199 24432499 -228824084 - AluJo SINE Alu -14 298 1 710 269 41 62 chr2 24432499 24432685 -228823898 - L1M4 LINE L1 -2454 3692 3504 2366 62 0 0 chr2 24432685 24433006 -228823577 - AluY SINE Alu -33 278 1 24 0 0 0 chr2 24433015 24433039 -228823544 + AT_rich Low_complexity Low_complexity 1 24 0 710 269 41 62 chr2 24433039 24433060 -228823523 - L1M4 LINE L1 -2650 3496 3459 2138 243 87 65 chr2 24433087 24433881 -228822702 - MER21B LTR ERV1 -52 811 1 533 170 11 0 chr2 24434057 24434151 -228822432 + FLAM_A SINE Alu 1 95 -47 1739 51 69 5 chr2 24434151 24434368 -228822215 + AluY SINE Alu 1 231 -80 295 320 21 0 chr2 24435138 24435235 -228821348 - L2 LINE L2 -21 3251 3153 406 299 113 31 chr2 24435337 24435789 -228820794 - L2 LINE L2 -838 2476 1988 263 319 121 21 chr2 24438780 24438921 -228817662 - L2 LINE L2 -3 3269 3115 2299 115 0 6 chr2 24438962 24439276 -228817307 + AluSx SINE Alu 1 312 0 1872 149 0 24 chr2 24439293 24439582 -228817001 + AluJb SINE Alu 1 282 -30 808 270 83 12 chr2 24439736 24439977 -228816606 + MER45C DNA AcHobo 16 273 -680 242 301 84 0 chr2 24440739 24440882 -228815701 - L1ME LINE L1 -207 5914 5760 183 162 0 0 chr2 24442060 24442097 -228814486 + T-rich Low_complexity Low_complexity 1 37 0 2281 77 3 7 chr2 24442111 24442397 -228814186 + AluSx SINE Alu 18 302 -10 827 124 0 0 chr2 24442407 24442512 -228814071 - FLAM_C SINE Alu -26 117 13 1394 102 0 66 chr2 24443071 24443297 -228813286 + AluJo SINE Alu 94 304 -8 209 178 0 82 chr2 24443538 24443611 -228812972 + (CCCCG)n Simple_repeat Simple_repeat 5 71 0 2448 85 0 0 chr2 24444968 24445261 -228811322 + AluSg SINE Alu 9 301 -9 251 195 273 0 chr2 24445456 24445533 -228811050 - L2 LINE L2 -3 3310 3213 380 323 37 12 chr2 24445549 24445713 -228810870 + L2 LINE L2 2924 3091 -181 1164 257 214 24 chr2 24445747 24446591 -228809992 + L2 LINE L2 2174 3218 -95 1577 186 13 39 chr2 24446591 24446897 -228809686 + AluJb SINE Alu 1 298 -14 1164 257 214 24 chr2 24446897 24447000 -228809583 + L2 LINE L2 3218 3300 -13 198 0 0 0 chr2 24447001 24447023 -228809560 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 1793 162 0 55 chr2 24447026 24447335 -228809248 - AluJo SINE Alu -20 292 1 251 271 14 0 chr2 24447457 24447527 -228809056 + L2 LINE L2 3200 3270 -2 2497 235 67 54 chr2 24448902 24449101 -228807482 - L1ME3A LINE L1 -14 6156 5961 1882 137 22 26 chr2 24449101 24449414 -228807169 - AluJb SINE Alu 0 312 1 2497 235 67 54 chr2 24449414 24449888 -228806695 - L1ME3A LINE L1 -209 5961 5495 2320 107 16 0 chr2 24449888 24450196 -228806387 - AluSq SINE Alu 0 313 1 2497 235 67 54 chr2 24450196 24450249 -228806334 - L1ME3A LINE L1 -675 5495 5444 1725 96 5 0 chr2 24450249 24450468 -228806115 - AluSg/x SINE Alu -10 302 83 2497 235 67 54 chr2 24450468 24450590 -228805993 - L1ME3A LINE L1 -726 5444 5325 2257 130 0 0 chr2 24450590 24450897 -228805686 - AluSq SINE Alu -6 307 1 2497 235 67 54 chr2 24450897 24451085 -228805498 - L1ME3A LINE L1 -845 5325 5141 1795 152 0 70 chr2 24451085 24451269 -228805314 - AluJo SINE Alu -6 306 153 2347 100 3 0 chr2 24451269 24451579 -228805004 - AluSp SINE Alu -2 311 1 1795 152 0 70 chr2 24451579 24451723 -228804860 - AluJo SINE Alu -159 153 1 2497 235 67 54 chr2 24451723 24451821 -228804762 - L1ME3A LINE L1 -1029 5141 5046 2396 92 0 13 chr2 24451821 24452126 -228804457 + AluSx SINE Alu 1 301 -11 2497 235 67 54 chr2 24452126 24452387 -228804196 - L1ME3A LINE L1 -1124 5046 4822 311 311 0 0 chr2 24452510 24452600 -228803983 + (TG)n Simple_repeat Simple_repeat 2 91 0 379 293 26 0 chr2 24452925 24453041 -228803542 - MIR3 SINE MIR -50 158 40 2336 101 3 7 chr2 24453518 24453825 -228802758 + AluSx SINE Alu 1 306 -6 665 292 161 32 chr2 24453874 24454175 -228802408 - L2 LINE L2 -453 2861 2600 2099 146 0 3 chr2 24454175 24454498 -228802085 + AluSx SINE Alu 1 312 0 665 292 161 32 chr2 24454498 24454669 -228801914 - L2 LINE L2 -714 2600 2328 1951 140 44 0 chr2 24455089 24455382 -228801201 + AluSx SINE Alu 1 306 -6 479 184 72 121 chr2 24455469 24455676 -228800907 - L1MC4a LINE L1 -6 7802 7606 2107 89 41 7 chr2 24455774 24456065 -228800518 - AluY SINE Alu -10 301 1 2346 101 0 19 chr2 24456067 24456383 -228800200 - AluSx SINE Alu 0 312 3 907 141 0 15 chr2 24456385 24456520 -228800063 - AluSq/x SINE Alu -180 133 1 1595 120 127 15 chr2 24457752 24458033 -228798550 - AluSg1 SINE Alu 0 309 1 2537 91 0 0 chr2 24458590 24458897 -228797686 - AluY SINE Alu -4 307 1 32 26 0 0 chr2 24458961 24459000 -228797583 + AT_rich Low_complexity Low_complexity 1 39 0 647 169 25 25 chr2 24459000 24459118 -228797465 - FLAM_C SINE Alu -15 118 1 227 235 118 35 chr2 24461224 24461309 -228795274 + MIR SINE MIR 114 205 -57 2458 45 7 3 chr2 24461882 24462169 -228794414 - AluY SINE Alu -23 288 1 2189 154 0 0 chr2 24462741 24463053 -228793530 - AluSx SINE Alu 0 312 1 1039 102 0 0 chr2 24464190 24464318 -228792265 - AluSx SINE Alu -152 160 33 200 261 123 0 chr2 24464508 24464533 -228792050 - L2 LINE L2 -22 3250 3229 645 172 0 17 chr2 24464533 24464649 -228791934 - MER81 DNA DNA 0 114 1 200 261 123 0 chr2 24464649 24464688 -228791895 - L2 LINE L2 -43 3229 3178 701 276 55 57 chr2 24464763 24464901 -228791682 - L2 LINE L2 -22 3291 3154 2378 101 0 0 chr2 24464901 24465197 -228791386 - AluSg SINE Alu -14 296 1 701 276 55 57 chr2 24465197 24465229 -228791354 - L2 LINE L2 -159 3154 3123 2357 99 0 0 chr2 24465229 24465523 -228791060 + AluSq SINE Alu 1 294 -19 701 276 55 57 chr2 24465523 24465717 -228790866 - L2 LINE L2 -190 3123 2927 2003 141 6 16 chr2 24465879 24466192 -228790391 - AluSx SINE Alu -2 310 1 221 247 142 13 chr2 24466510 24466622 -228789961 - MIR SINE MIR -66 142 17 198 364 121 0 chr2 24466650 24466749 -228789834 - MIR SINE MIR -64 144 34 313 157 0 0 chr2 24466749 24466800 -228789783 - AluSg SINE Alu -187 113 63 28 0 0 0 chr2 24467153 24467181 -228789402 + AT_rich Low_complexity Low_complexity 1 28 0 988 144 7 13 chr2 24468283 24468436 -228788147 + AluJo SINE Alu 1 152 -160 206 325 38 12 chr2 24468495 24468575 -228788008 + L2 LINE L2 1352 1433 -1881 552 303 122 18 chr2 24468616 24468753 -228787830 + L2 LINE L2 1574 1695 -1619 2335 106 0 0 chr2 24468753 24469045 -228787538 + AluSx SINE Alu 1 292 -20 552 303 122 18 chr2 24469045 24469250 -228787333 + L2 LINE L2 1695 1952 -1362 992 182 0 28 chr2 24469253 24469434 -228787149 - FRAM SINE Alu 0 40 1 460 142 132 28 chr2 24469530 24469636 -228786947 + L2 LINE L2 3189 3305 -8 200 286 7 65 chr2 24470718 24470872 -228785711 + (CGGGG)n Simple_repeat Simple_repeat 5 149 0 552 258 52 99 chr2 24471825 24472190 -228784393 + MER34 LTR ERV1 1 348 -194 957 161 301 0 chr2 24472217 24472410 -228784173 + AluJo SINE Alu 58 308 -4 255 246 18 0 chr2 24472414 24472471 -228784112 + MER34 LTR ERV1 446 503 -39 1055 141 18 6 chr2 24472785 24472955 -228783628 - FAM SINE Alu -3 172 1 2330 106 7 0 chr2 24473981 24474283 -228782300 + AluSx SINE Alu 1 304 -8 2425 82 0 23 chr2 24475597 24475901 -228780682 - AluY SINE Alu -14 297 1 1877 151 42 3 chr2 24475906 24476190 -228780393 - AluJb SINE Alu -17 295 1 342 287 0 11 chr2 24477243 24477337 -228779246 - MIR3 SINE MIR -3 205 113 182 361 0 0 chr2 24477438 24477510 -228779073 - MER5A DNA MER1_type 0 189 118 461 258 39 16 chr2 24477666 24477794 -228778789 + MIR SINE MIR 17 147 -115 594 75 0 0 chr2 24478247 24478327 -228778256 + (CAGGG)n Simple_repeat Simple_repeat 1 80 0 791 185 0 0 chr2 24479264 24479394 -228777189 - MER20 DNA MER1_type -1 218 89 2226 120 42 3 chr2 24479408 24479765 -228776818 + MER31A LTR ERV1 115 485 0 323 337 88 50 chr2 24479766 24479860 -228776723 + HAL1 LINE L1 1144 1233 -1274 2759 23 0 0 chr2 24479860 24480159 -228776424 + AluY SINE Alu 1 299 -12 323 337 88 50 chr2 24480159 24480325 -228776258 + HAL1 LINE L1 1233 1414 -1093 281 185 15 0 chr2 24480380 24480445 -228776138 + CT-rich Low_complexity Low_complexity 3 68 0 921 137 0 0 chr2 24480447 24480571 -228776012 - FLAM_C SINE Alu -18 125 2 248 274 36 24 chr2 24481067 24481151 -228775432 + MER21B LTR ERV1 12 96 -767 675 194 8 22 chr2 24481152 24481286 -228775297 - FLAM_C SINE Alu -1 132 1 1515 236 95 104 chr2 24481312 24481514 -228775069 + MER21B LTR ERV1 39 241 -582 2055 141 0 10 chr2 24481514 24481684 -228774899 - AluSx SINE Alu -9 303 136 1373 113 204 57 chr2 24481684 24481949 -228774634 - AluSx SINE Alu -8 304 1 2055 141 0 10 chr2 24481949 24482084 -228774499 - AluSx SINE Alu -176 136 1 1515 236 95 104 chr2 24482084 24482268 -228774315 + MER21B LTR ERV1 241 425 -398 2176 121 0 0 chr2 24482268 24482557 -228774026 - AluSx SINE Alu -23 289 1 1515 236 95 104 chr2 24482557 24482893 -228773690 + MER21B LTR ERV1 425 819 -4 1275 134 0 0 chr2 24482973 24483144 -228773439 + AluSq SINE Alu 1 171 -142 226 236 0 0 chr2 24483623 24483678 -228772905 + MLT1I LTR MaLR 329 383 -26 1281 92 52 0 chr2 24483724 24483898 -228772685 + AluSp SINE Alu 125 307 -6 2455 63 17 0 chr2 24483899 24484199 -228772384 + AluY SINE Alu 2 306 -5 1852 115 77 11 chr2 24484211 24484497 -228772086 + AluSx SINE Alu 6 310 -2 327 273 13 13 chr2 24484536 24484690 -228771893 + L1ME LINE L1 3830 3983 -2163 1010 161 18 78 chr2 24484706 24484923 -228771660 - AluJb SINE Alu -23 289 86 2370 51 41 0 chr2 24485069 24485364 -228771219 + AluY SINE Alu 2 308 -3 495 293 41 53 chr2 24485444 24485856 -228770727 + L1ME LINE L1 4288 4704 -1442 1821 157 51 7 chr2 24485856 24486150 -228770433 + AluJb SINE Alu 1 307 -5 495 293 41 53 chr2 24486150 24486199 -228770384 + L1ME LINE L1 4704 4745 -1401 2136 126 7 3 chr2 24486199 24486508 -228770075 + AluSx SINE Alu 1 310 -2 495 293 41 53 chr2 24486508 24486536 -228770047 + L1ME LINE L1 4745 4772 -1374 367 287 37 38 chr2 24486542 24486710 -228769873 + L1ME LINE L1 5634 5799 -341 387 0 0 0 chr2 24486831 24486874 -228769709 + (CA)n Simple_repeat Simple_repeat 1 43 0 4842 67 0 7 chr2 24487043 24487527 -228769056 - L1PA8 LINE L1 -3 6169 5688 2113 108 3 14 chr2 24487527 24487823 -228768760 - AluSg SINE Alu -17 293 1 4842 67 0 7 chr2 24487823 24487933 -228768650 - L1PA8 LINE L1 -484 5688 5579 1724 149 3 97 chr2 24487936 24488278 -228768305 - AluJo SINE Alu -2 310 1 461 180 62 123 chr2 24488279 24488409 -228768174 - Charlie2a DNA MER1_type -63 2799 2663 1578 207 7 0 chr2 24488409 24488689 -228767894 - AluJo SINE Alu -30 282 1 461 180 62 123 chr2 24488689 24488717 -228767866 - Charlie2a DNA MER1_type -199 2663 2635 1799 131 0 11 chr2 24488717 24488977 -228767606 + AluSx SINE Alu 1 257 -55 461 180 62 123 chr2 24488977 24489061 -228767522 - Charlie2a DNA MER1_type -227 2635 2571 38825 81 11 8 chr2 24489064 24495165 -228761418 + L1PA6 LINE L1 27 6137 -17 4029 179 93 35 chr2 24495165 24495579 -228761004 - Charlie2a DNA MER1_type -272 2590 2202 2199 123 0 0 chr2 24495579 24495888 -228760695 - AluY SINE Alu -2 309 1 4029 179 93 35 chr2 24495888 24496362 -228760221 - Charlie2a DNA MER1_type -660 2202 1628 2201 136 0 0 chr2 24496362 24496671 -228759912 + AluSx SINE Alu 1 309 -3 4029 179 93 35 chr2 24496671 24496840 -228759743 - Charlie2a DNA MER1_type -1234 1628 1470 479 274 34 0 chr2 24496910 24497027 -228759556 - Charlie2b DNA MER1_type -2131 651 531 579 266 79 39 chr2 24497042 24497347 -228759236 - Charlie2b DNA MER1_type -2545 317 1 471 326 23 31 chr2 24497861 24498214 -228758369 + L1PA15 LINE L1 1 350 -7231 11329 180 168 18 chr2 24499263 24500220 -228756363 + L1PA15 LINE L1 2319 3132 -4471 2281 114 7 0 chr2 24500220 24500526 -228756057 - AluSq SINE Alu -5 308 1 11329 180 168 18 chr2 24500526 24502201 -228754382 + L1PA15 LINE L1 3132 4556 -3047 207 0 0 0 chr2 24502201 24502224 -228754359 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 11329 180 168 18 chr2 24502224 24502526 -228754057 + L1PA15 LINE L1 4556 4812 -2791 2462 86 0 0 chr2 24502526 24502829 -228753754 + AluY SINE Alu 1 303 -8 11329 180 168 18 chr2 24502829 24504235 -228752348 + L1PA15 LINE L1 4812 7477 -126 1765 223 84 62 chr2 24504264 24504848 -228751735 + MER21B LTR ERV1 131 727 -136 1941 161 7 0 chr2 24504974 24505265 -228751318 - AluJo SINE Alu -19 293 1 536 246 204 9 chr2 24505846 24506175 -228750408 + L1ME4a LINE L1 5593 5985 -136 2213 112 0 3 chr2 24506203 24506508 -228750075 - AluSq SINE Alu -9 304 1 401 321 132 59 chr2 24506709 24507064 -228749519 + L2 LINE L2 2847 3227 -45 197 216 0 0 chr2 24507069 24507106 -228749477 - L2 LINE L2 -50 3263 3227 1843 182 10 0 chr2 24507197 24507499 -228749084 + AluJo SINE Alu 1 305 -7 2165 125 0 0 chr2 24507501 24507806 -228748777 + AluSq SINE Alu 1 305 -8 183 42 0 0 chr2 24507870 24507894 -228748689 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2762 258 62 36 chr2 24508133 24508944 -228747639 - HERVL40 LTR ERVL -848 4682 3851 1303 238 31 10 chr2 24508949 24509239 -228747344 - LTR40c LTR ERVL -169 296 1 669 220 33 33 chr2 24509587 24509737 -228746846 - L2 LINE L2 0 3272 3123 2119 132 0 0 chr2 24509953 24510249 -228746334 + AluY SINE Alu 1 296 -15 795 176 0 0 chr2 24510277 24510396 -228746187 - FLAM_A SINE Alu -13 120 2 2085 114 3 69 chr2 24510479 24510813 -228745770 + AluSx SINE Alu 1 312 0 2090 125 3 3 chr2 24510921 24511216 -228745367 - AluSx SINE Alu -11 301 7 2178 139 0 0 chr2 24511339 24511649 -228744934 - AluSx SINE Alu -2 310 1 253 190 17 0 chr2 24511654 24511712 -228744871 + L1ME4a LINE L1 6062 6120 -1 320 314 51 8 chr2 24512343 24512461 -228744122 - L2 LINE L2 0 3313 3191 228 315 67 34 chr2 24512645 24512734 -228743849 + L2 LINE L2 3168 3259 -13 213 39 0 0 chr2 24512734 24512760 -228743823 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 329 253 25 13 chr2 24513370 24513449 -228743134 + MLT1K LTR MaLR 509 588 0 2244 92 3 0 chr2 24513893 24514218 -228742365 + AluSq SINE Alu 1 326 0 360 264 73 27 chr2 24514240 24514350 -228742233 + MIR SINE MIR 30 144 -118 2003 84 80 28 chr2 24514457 24514743 -228741840 - AluSq SINE Alu -12 301 1 1750 150 43 37 chr2 24515230 24515512 -228741071 + MER58B DNA MER1_type 1 287 -2133 2182 110 147 21 chr2 24515512 24515893 -228740690 + MSTB1 LTR MaLR 1 429 -3 1750 150 43 37 chr2 24515893 24515937 -228740646 + MER58B DNA MER1_type 287 329 -12 2180 110 21 0 chr2 24515956 24516247 -228740336 + AluSq SINE Alu 1 297 -16 22 103 0 0 chr2 24517588 24517666 -228738917 + GC_rich Low_complexity Low_complexity 1 78 0 581 183 174 9 chr2 24518443 24518673 -228737910 - L1MEc LINE L1 -2956 3259 2992 993 198 33 33 chr2 24518696 24518908 -228737675 - AluJo SINE Alu -100 212 1 3277 186 28 93 chr2 24518951 24519006 -228737577 - L1ME1 LINE L1 -5 6161 6104 1674 162 3 24 chr2 24519006 24519296 -228737287 + AluJo SINE Alu 6 289 -23 3277 186 28 93 chr2 24519296 24519469 -228737114 - L1ME1 LINE L1 -62 6104 5921 2037 123 37 7 chr2 24519469 24519769 -228736814 - AluSx SINE Alu -3 309 1 3277 186 28 93 chr2 24519769 24520473 -228736110 - L1ME1 LINE L1 -245 5921 5289 2704 240 96 100 chr2 24520457 24520482 -228736101 - L1MEc LINE L1 -4995 1401 1377 * 3507 139 20 85 chr2 24520482 24520519 -228736064 - L1MB7 LINE L1 -18 6166 6128 2288 64 3 54 chr2 24520519 24520832 -228735751 - AluY SINE Alu -14 297 1 3507 139 20 85 chr2 24520832 24521497 -228735086 - L1MB7 LINE L1 -56 6128 5510 2704 240 96 100 chr2 24521497 24521572 -228735011 - L1MEc LINE L1 -5019 1377 1303 2038 145 3 0 chr2 24521572 24521869 -228734714 - AluSx SINE Alu -14 298 1 2704 240 96 100 chr2 24521869 24522139 -228734444 - L1MEc LINE L1 -5093 1303 1034 870 150 0 15 chr2 24522139 24522295 -228734288 - FLAM_C SINE Alu 0 133 1 2704 240 96 100 chr2 24522295 24523292 -228733291 - L1MEc LINE L1 -5362 1034 37 * 2818 230 59 61 chr2 24523286 24523709 -228732874 - L1ME LINE L1 -4984 1086 664 13746 110 10 28 chr2 24523709 24526526 -228730057 - L1PA8 LINE L1 0 6172 3382 2818 230 59 61 chr2 24526526 24527177 -228729406 - L1ME LINE L1 -5406 664 81 863 211 11 58 chr2 24527651 24527841 -228728742 + AluJo SINE Alu 125 305 -7 1995 141 3 10 chr2 24528575 24528879 -228727704 + AluSx SINE Alu 1 302 -10 1914 149 0 32 chr2 24529957 24530142 -228726441 - AluJb SINE Alu -1 311 139 2052 123 10 14 chr2 24530142 24530434 -228726149 - AluSx SINE Alu -21 291 1 1914 149 0 32 chr2 24530434 24530564 -228726019 - AluJb SINE Alu -173 139 6 3190 133 39 44 chr2 24530672 24531265 -228725318 - L1MB4 LINE L1 -15 6165 5576 813 247 0 0 chr2 24531397 24531563 -228725020 - FRAM SINE Alu 0 166 1 1974 131 7 7 chr2 24532256 24532539 -228724044 - AluSg SINE Alu -27 283 1 2436 83 3 0 chr2 24534872 24535184 -228721399 - AluSq SINE Alu 0 313 1 430 144 44 11 chr2 24536378 24536468 -228720115 - AluJ/FLAM SINE Alu -219 93 1 1613 204 14 0 chr2 24536522 24536806 -228719777 + AluJb SINE Alu 1 288 -24 632 158 190 6 chr2 24536822 24536980 -228719603 - MER44D DNA MER2_type -134 475 19 2214 228 161 12 chr2 24537126 24538229 -228718354 - L1ME3 LINE L1 -8 6154 4901 377 277 71 0 chr2 24538239 24538351 -228718232 + FLAM_A SINE Alu 1 120 -13 2219 118 7 3 chr2 24538357 24538662 -228717921 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 24538687 24538715 -228717868 + AT_rich Low_complexity Low_complexity 1 28 0 363 50 125 6 chr2 24539707 24539867 -228716716 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 593 54 27 65 chr2 24539845 24540031 -228716552 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 2206 98 3 0 chr2 24540039 24540324 -228716259 - AluSp SINE Alu -27 286 1 2255 110 10 0 chr2 24540374 24540674 -228715909 - AluSx SINE Alu -9 303 1 537 265 48 58 chr2 24541280 24541341 -228715242 + L1MC4a LINE L1 5313 5373 -2435 1870 116 56 7 chr2 24541341 24541510 -228715073 - AluSg SINE Alu -11 299 109 195 42 0 0 chr2 24541510 24541534 -228715049 + (TG)n Simple_repeat Simple_repeat 2 25 0 1870 116 56 7 chr2 24541534 24541649 -228714934 - AluSg SINE Alu -201 109 1 2308 98 0 3 chr2 24541649 24541946 -228714637 - AluSq SINE Alu -17 296 1 537 265 48 58 chr2 24541946 24542174 -228714409 + L1MC4a LINE L1 5371 5600 -2208 2257 102 3 0 chr2 24542188 24542482 -228714101 + AluSx SINE Alu 1 295 -17 2116 117 3 0 chr2 24542634 24542924 -228713659 + AluSg SINE Alu 1 291 -19 312 250 105 0 chr2 24542933 24543057 -228713526 + L1MC4a LINE L1 5817 5953 -1855 297 219 0 0 chr2 24543170 24543243 -228713340 + (TATG)n Simple_repeat Simple_repeat 2 74 0 188 0 74 0 chr2 24543344 24543371 -228713212 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr2 24544193 24544218 -228712365 + AT_rich Low_complexity Low_complexity 1 25 0 194 324 69 20 chr2 24545381 24545483 -228711100 + MIR SINE MIR 153 259 -3 187 309 56 16 chr2 24545522 24545648 -228710935 - L3 LINE CR1 -808 769 639 2649 49 0 0 chr2 24546427 24546732 -228709851 + AluY SINE Alu 1 305 -6 1827 156 0 17 chr2 24547381 24547683 -228708900 + AluJb SINE Alu 1 297 -15 1382 202 63 25 chr2 24548003 24548370 -228708213 + MER119 DNA MER1_type 149 529 -54 2127 125 0 0 chr2 24548564 24548893 -228707690 + AluSx SINE Alu 1 329 0 496 332 110 12 chr2 24548905 24549224 -228707359 + L1M4 LINE L1 3850 4199 -1947 632 228 27 0 chr2 24549226 24549375 -228707208 - MLT1J2 LTR MaLR -227 223 71 205 286 79 0 chr2 24549712 24549775 -228706808 - MIR SINE MIR -13 249 182 440 239 301 23 chr2 24550234 24550410 -228706173 + MIR SINE MIR 24 248 -14 577 174 67 49 chr2 24550630 24550854 -228705729 - L1MC5 LINE L1 -125 7836 7609 1212 187 92 75 chr2 24550906 24551518 -228705065 - L1MC5 LINE L1 -450 7511 6821 180 0 0 0 chr2 24551742 24551762 -228704821 + (A)n Simple_repeat Simple_repeat 1 20 0 2249 121 0 0 chr2 24551919 24552224 -228704359 - AluSg SINE Alu -5 305 1 240 100 0 0 chr2 24552784 24552824 -228703759 + (A)n Simple_repeat Simple_repeat 1 40 0 359 191 217 35 chr2 24552932 24553047 -228703536 - L2 LINE L2 -3 3310 3175 1666 226 76 51 chr2 24553741 24554503 -228702080 + L1M4 LINE L1 2461 3241 -2905 1188 158 6 0 chr2 24554542 24554725 -228701858 - AluSg/x SINE Alu -9 303 120 579 122 52 0 chr2 24554725 24554840 -228701743 + MER58 DNA MER1_type 93 213 -128 972 176 49 15 chr2 24554845 24555049 -228701534 + MER58B DNA MER1_type 130 340 -1 396 191 11 11 chr2 24555603 24555692 -228700891 - Charlie1 DNA MER1_type 0 2761 2673 1952 279 65 73 chr2 24555840 24556596 -228699987 - L1MEc LINE L1 -4842 1554 813 2529 77 0 0 chr2 24556596 24556907 -228699676 - AluY SINE Alu 0 311 1 1952 279 65 73 chr2 24556907 24557666 -228698917 - L1MEc LINE L1 -5583 813 50 826 282 56 11 chr2 24558512 24558870 -228697713 - HsTC2 DNA Tc2 -1043 855 482 2401 80 0 3 chr2 24559706 24560006 -228696577 - AluSq SINE Alu -14 299 1 1758 112 98 0 chr2 24560012 24560289 -228696294 - AluY SINE Alu -7 304 1 191 314 0 0 chr2 24561086 24561137 -228695446 + L3 LINE CR1 1512 1562 -15 1950 225 50 41 chr2 24561327 24561910 -228694673 - L1ME3A LINE L1 -26 6144 5557 2010 99 0 87 chr2 24561933 24562255 -228694328 - AluSx SINE Alu -2 310 17 2335 83 0 3 chr2 24563068 24563369 -228693214 + AluSq SINE Alu 3 302 -11 202 329 105 22 chr2 24563599 24563827 -228692756 - L2 LINE L2 -1154 2160 1914 216 162 0 0 chr2 24564102 24564139 -228692444 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 193 333 42 0 chr2 24564595 24564667 -228691916 - L3 LINE CR1 -98 1479 1405 5018 213 64 51 chr2 24565505 24567137 -228689446 - L1MDa LINE L1 -4691 1849 196 * 6958 160 36 10 chr2 24567115 24569162 -228687421 + L1M2 LINE L1 3681 5804 -496 2217 88 0 14 chr2 24569265 24569562 -228687021 + AluY SINE Alu 1 293 -18 382 197 123 33 chr2 24569592 24569714 -228686869 - L1MEd LINE L1 -2473 3656 3524 1782 166 89 111 chr2 24570013 24570106 -228686477 - L1MD3 LINE L1 -1 7994 7900 1871 108 56 0 chr2 24570106 24570426 -228686157 - AluY SINE Alu 0 335 1 1782 166 89 111 chr2 24570426 24570951 -228685632 - L1MD3 LINE L1 -95 7900 7389 230 197 79 92 chr2 24570953 24571029 -228685554 - MLT1F1 LTR MaLR -456 111 37 411 172 0 11 chr2 24571030 24571123 -228685460 - L1MC3 LINE L1 -687 7098 7007 432 229 134 55 chr2 24571267 24571333 -228685250 - L1MEd LINE L1 -2873 3256 3197 962 145 23 23 chr2 24571333 24571505 -228685078 + FAM SINE Alu 1 172 -3 432 229 134 55 chr2 24571505 24571892 -228684691 - L1MEd LINE L1 -2932 3197 2767 281 279 59 76 chr2 24571911 24571981 -228684602 - L1MEd LINE L1 -5012 1107 1037 2171 91 16 56 chr2 24571981 24572300 -228684283 - AluY SINE Alu -5 306 1 281 279 59 76 chr2 24572300 24572753 -228683830 - L1MEd LINE L1 -5082 1037 593 3819 156 16 0 chr2 24572811 24573447 -228683136 - L1PA16 LINE L1 -7 6159 5514 12447 145 29 8 chr2 24573447 24575740 -228680843 - L1PA15-16 LINE L1 -3658 3191 850 1720 177 0 49 chr2 24576061 24576389 -228680194 - AluJb SINE Alu 0 312 1 433 246 79 28 chr2 24576452 24576616 -228679967 + MER5A DNA MER1_type 7 189 0 771 279 52 22 chr2 24576737 24576966 -228679617 - MIR SINE MIR -26 236 1 269 350 97 13 chr2 24577094 24577320 -228679263 + MIR SINE MIR 2 246 -16 351 269 43 21 chr2 24577461 24577554 -228679029 - L2 LINE L2 -22 3291 3197 1905 173 0 0 chr2 24578055 24578339 -228678244 - AluJb SINE Alu -23 289 6 27 0 0 0 chr2 24578638 24578665 -228677918 + AT_rich Low_complexity Low_complexity 1 27 0 659 153 90 0 chr2 24579154 24579265 -228677318 - 5S rRNA rRNA 0 121 1 22 0 0 0 chr2 24579382 24579404 -228677179 + AT_rich Low_complexity Low_complexity 1 22 0 35 24 0 0 chr2 24579800 24579842 -228676741 + AT_rich Low_complexity Low_complexity 1 42 0 6690 151 123 54 chr2 24580086 24581539 -228675044 - MER52A LTR ERV1 0 1755 204 276 221 234 0 chr2 24581540 24581617 -228674966 - MER52A LTR ERV1 -1660 95 1 2065 115 31 7 chr2 24582284 24582570 -228674013 - AluSx SINE Alu -19 293 1 1122 174 8 26 chr2 24584179 24584431 -228672152 + MER52A LTR ERV1 903 1114 -164 11896 116 35 6 chr2 24584432 24586521 -228670062 + Tigger1 DNA MER2_type 250 2417 -1 51 42 0 0 chr2 24586843 24586915 -228669668 + AT_rich Low_complexity Low_complexity 1 72 0 1737 168 0 0 chr2 24587041 24587321 -228669262 + AluJb SINE Alu 2 281 -31 2198 121 3 13 chr2 24587605 24587920 -228668663 + AluSx SINE Alu 1 312 0 1553 210 17 17 chr2 24588026 24588326 -228668257 + AluJo SINE Alu 1 300 -12 1975 133 0 13 chr2 24589037 24589345 -228667238 + AluJb SINE Alu 4 307 -5 2128 79 7 17 chr2 24589523 24589815 -228666768 + AluSq SINE Alu 14 302 -11 2451 74 0 3 chr2 24590204 24590503 -228666080 - AluSq SINE Alu -15 298 1 339 304 133 57 chr2 24590612 24591139 -228665444 - L2 LINE L2 -820 2494 1928 394 231 93 9 chr2 24591173 24591281 -228665302 + MLT1J LTR MaLR 395 511 0 22 35 0 0 chr2 24591730 24591759 -228664824 + AT_rich Low_complexity Low_complexity 1 29 0 224 286 86 0 chr2 24592701 24592771 -228663812 - L2 LINE L2 -8 3264 3189 1516 168 68 91 chr2 24592773 24593226 -228663357 - MSTB2 LTR MaLR 0 457 15 212 276 9 67 chr2 24593348 24593453 -228663130 - L2 LINE L2 -183 3089 2991 919 322 89 39 chr2 24593479 24594166 -228662417 - L2 LINE L2 -452 2862 2142 1733 180 17 3 chr2 24594207 24594502 -228662081 + AluJo SINE Alu 1 299 -13 3084 186 26 6 chr2 24594553 24595209 -228661374 + L1MC3 LINE L1 6371 7039 -746 227 175 0 150 chr2 24595256 24595336 -228661247 + MLT1F1 LTR MaLR 35 102 -465 198 344 38 15 chr2 24595336 24595467 -228661116 - L2 LINE L2 -1323 1991 1858 2147 109 14 0 chr2 24595550 24595835 -228660748 - AluSx SINE Alu -23 289 1 408 169 0 28 chr2 24595896 24595967 -228660616 + AluJ/FRAM SINE Alu 228 296 -16 616 237 80 22 chr2 24596420 24596811 -228659772 - MLT1H1 LTR MaLR -66 489 32 238 319 0 0 chr2 24597264 24597336 -228659247 + L1MC/D LINE L1 5564 5635 -2173 2330 99 0 3 chr2 24597453 24597755 -228658828 + AluY SINE Alu 1 301 -10 2079 125 62 28 chr2 24597838 24598190 -228658393 - THE1B LTR MaLR 0 364 1 9701 102 24 9 chr2 24598190 24599322 -228657261 - THE1B-int LTR MaLR 0 1580 420 2274 88 0 14 chr2 24599322 24599616 -228656967 - AluY SINE Alu -21 290 1 9701 102 24 9 chr2 24599616 24599924 -228656659 - THE1B-int LTR MaLR -1160 420 118 607 197 0 48 chr2 24600514 24600661 -228655922 + L1PA16 LINE L1 6027 6166 0 2022 160 26 50 chr2 24601171 24601271 -228655312 + MLT2D LTR ERVL 6 107 -307 2928 52 0 0 chr2 24601271 24601635 -228654948 + L1PA5 LINE L1 5790 6153 -1 2022 160 26 50 chr2 24601635 24601893 -228654690 + MLT2D LTR ERVL 107 355 -59 201 39 0 0 chr2 24601893 24601919 -228654664 + (CCCCAG)n Simple_repeat Simple_repeat 1 26 0 2022 160 26 50 chr2 24601919 24601978 -228654605 + MLT2D LTR ERVL 355 414 0 213 264 209 0 chr2 24602049 24602140 -228654443 - L2 LINE L2 0 3313 3204 214 162 0 0 chr2 24603333 24603370 -228653213 + L2 LINE L2 3236 3272 0 21 57 0 0 chr2 24604172 24604207 -228652376 + AT_rich Low_complexity Low_complexity 1 35 0 441 276 51 39 chr2 24605638 24605794 -228650789 + MIR3 SINE MIR 26 183 -25 234 0 0 0 chr2 24606812 24606838 -228649745 + (A)n Simple_repeat Simple_repeat 1 26 0 406 244 207 6 chr2 24607311 24607475 -228649108 - L2 LINE L2 0 3313 3117 31 26 0 0 chr2 24607607 24607645 -228648938 + AT_rich Low_complexity Low_complexity 1 38 0 223 315 46 54 chr2 24607659 24607789 -228648794 - L2 LINE L2 -256 3016 2888 530 226 48 30 chr2 24607896 24608064 -228648519 - MIR SINE MIR 0 262 92 659 280 43 14 chr2 24608391 24608602 -228647981 - L2 LINE L2 -6 3307 3091 372 88 0 0 chr2 24609729 24609786 -228646797 + (CA)n Simple_repeat Simple_repeat 1 57 0 1365 222 33 0 chr2 24611043 24611318 -228645265 + AluJo SINE Alu 3 286 -26 180 0 0 0 chr2 24611318 24611338 -228645245 + (GGGGA)n Simple_repeat Simple_repeat 4 23 0 341 333 85 0 chr2 24611497 24611638 -228644945 + MER5A DNA MER1_type 37 189 0 328 292 96 88 chr2 24611646 24611906 -228644677 + HAL1 LINE L1 816 1077 -1430 287 296 20 0 chr2 24611954 24612052 -228644531 + L1ME LINE L1 22 121 -5949 899 160 169 46 chr2 24612663 24612882 -228643701 + AluSq SINE Alu 1 246 -67 616 225 0 8 chr2 24612883 24613040 -228643543 + AluJb SINE Alu 154 309 0 344 174 14 0 chr2 24613045 24613114 -228643469 - AluSc SINE Alu -98 201 132 2237 97 0 3 chr2 24613114 24613424 -228643159 - AluSx SINE Alu -3 309 1 319 236 199 29 chr2 24613424 24613665 -228642918 + L1M4 LINE L1 4565 4846 -1300 23 68 0 0 chr2 24613762 24613806 -228642777 + AT_rich Low_complexity Low_complexity 1 44 0 232 326 84 22 chr2 24614417 24614595 -228641988 + MIR SINE MIR 57 245 -17 1354 127 47 4 chr2 24615237 24615490 -228641093 - L1MA5 LINE L1 -10 6290 6027 1449 217 40 25 chr2 24615758 24616205 -228640378 - pTR5 LTR ERV1 -1242 1196 743 1871 133 46 0 chr2 24616580 24616865 -228639718 + AluSx SINE Alu 1 298 -14 1766 120 31 22 chr2 24616867 24617184 -228639399 + L1PA15 LINE L1 5825 6144 -21 21 0 0 0 chr2 24617185 24617206 -228639377 + AT_rich Low_complexity Low_complexity 1 21 0 307 261 22 22 chr2 24617504 24617596 -228638987 - MIR SINE MIR 0 262 171 1839 169 3 7 chr2 24617677 24617984 -228638599 - AluJb SINE Alu -6 306 1 236 128 85 0 chr2 24618085 24618132 -228638451 + MER77 LTR ERV1 161 211 -394 228 161 71 18 chr2 24618111 24618167 -228638416 + MER21B LTR ERV1 140 198 -665 * 508 95 0 0 chr2 24618169 24618243 -228638340 + SVA Other Other 530 603 -783 822 248 101 51 chr2 24618362 24618847 -228637736 + MER77 LTR ERV1 196 670 -4 477 204 32 0 chr2 24618884 24618977 -228637606 - MIR SINE MIR -122 140 45 3199 147 76 21 chr2 24618997 24619577 -228637006 - LTR9 LTR ERV1 0 612 1 365 131 0 159 chr2 24619615 24619722 -228636861 + L1MA8 LINE L1 6197 6286 -5 2432 88 0 0 chr2 24619889 24620196 -228636387 - AluSc SINE Alu 0 309 3 562 283 11 60 chr2 24620354 24620538 -228636045 - MER5B DNA MER1_type -2 176 2 41 36 0 0 chr2 24620811 24620866 -228635717 + AT_rich Low_complexity Low_complexity 1 55 0 1975 172 0 6 chr2 24621044 24621358 -228635225 + AluJb SINE Alu 1 312 0 1043 299 77 21 chr2 24621438 24622050 -228634533 - L1ME3A LINE L1 -226 5944 5299 260 162 29 0 chr2 24622598 24622666 -228633917 + L1M4 LINE L1 4618 4687 -1459 2325 92 3 0 chr2 24622666 24622959 -228633624 - AluSq SINE Alu -19 294 1 1260 149 0 39 chr2 24623147 24623375 -228633208 - AluJo SINE Alu 0 305 86 224 258 88 44 chr2 24623604 24623763 -228632820 - MIR3 SINE MIR -42 166 1 239 216 0 0 chr2 24623861 24623912 -228632671 + G-rich Low_complexity Low_complexity 4 54 0 23 54 0 0 chr2 24623989 24624026 -228632557 + GC_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 24624064 24624085 -228632498 + GC_rich Low_complexity Low_complexity 1 21 0 197 56 0 56 chr2 24624103 24624139 -228632444 + (CGGG)n Simple_repeat Simple_repeat 3 36 0 201 74 0 0 chr2 24624178 24624205 -228632378 + (CGG)n Simple_repeat Simple_repeat 2 28 0 337 302 126 39 chr2 24624359 24624644 -228631939 - L1M2 LINE L1 -5932 917 608 28 61 0 0 chr2 24624866 24624915 -228631668 + GC_rich Low_complexity Low_complexity 1 49 0 342 274 158 21 chr2 24628654 24628844 -228627739 + MIR SINE MIR 18 233 -29 280 308 115 0 chr2 24628948 24629078 -228627505 + MIR3 SINE MIR 55 199 -9 243 302 42 21 chr2 24629600 24629696 -228626887 - MIR3 SINE MIR -8 200 103 292 172 0 35 chr2 24629951 24630009 -228626574 - L2 LINE L2 -2 3311 3256 377 302 10 0 chr2 24630021 24630117 -228626466 - MIR SINE MIR -120 142 46 2266 90 14 0 chr2 24630333 24630622 -228625961 + AluSg SINE Alu 1 293 -17 330 223 82 100 chr2 24630660 24630880 -228625703 - L1MCa LINE L1 -4893 1533 1318 308 340 21 37 chr2 24631183 24631374 -228625209 - L2 LINE L2 -2 3311 3124 2474 80 3 0 chr2 24633035 24633346 -228623237 - AluSp SINE Alu -1 312 1 2850 222 50 49 chr2 24633488 24634545 -228622038 + Charlie7 DNA MER1_type 1482 2539 -73 277 402 25 10 chr2 24635453 24635763 -228620820 + L2 LINE L2 2719 3032 -240 2270 103 3 3 chr2 24636672 24636973 -228619610 - AluSx SINE Alu -11 301 1 23 0 0 0 chr2 24637518 24637541 -228619042 + AT_rich Low_complexity Low_complexity 1 23 0 2197 106 26 0 chr2 24638115 24638417 -228618166 - AluSp SINE Alu -3 310 1 609 266 75 111 chr2 24638570 24639104 -228617479 + MLT1K LTR MaLR 74 588 0 189 0 0 0 chr2 24639116 24639137 -228617446 + (CAT)n Simple_repeat Simple_repeat 1 21 0 756 227 84 30 chr2 24639780 24639983 -228616600 + MIR SINE MIR 17 230 -32 944 127 6 6 chr2 24640022 24640180 -228616403 - L1MA4 LINE L1 0 6300 6143 737 158 137 93 chr2 24641140 24641462 -228615121 - L1MC5 LINE L1 -419 7542 7207 542 313 114 9 chr2 24641703 24641930 -228614653 - MIR SINE MIR -11 251 1 2204 94 14 3 chr2 24642637 24642924 -228613659 - AluSq SINE Alu -23 290 1 1613 151 17 48 chr2 24642928 24643220 -228613363 - AluJo SINE Alu -20 292 10 2298 148 22 0 chr2 24643420 24643791 -228612792 - L1MB7 LINE L1 -16 6168 5790 1964 182 111 5 chr2 24643792 24644494 -228612089 - L1MB7 LINE L1 -446 5734 4939 291 316 10 10 chr2 24645032 24645130 -228611453 - L3 LINE CR1 -151 1426 1329 257 352 98 26 chr2 24645130 24645323 -228611260 - L3 LINE CR1 -460 1117 911 182 333 98 8 chr2 24645406 24645538 -228611045 + MIR SINE MIR 60 203 -59 270 202 146 22 chr2 24645695 24645784 -228610799 - L1MC4 LINE L1 -10 8032 7933 393 250 83 13 chr2 24645987 24646143 -228610440 - L1ME LINE L1 -341 5821 5655 202 298 0 0 chr2 24646164 24646211 -228610372 + (TG)n Simple_repeat Simple_repeat 2 48 0 2500 78 7 0 chr2 24646584 24646893 -228609690 + AluY SINE Alu 1 311 0 21 57 0 0 chr2 24647029 24647064 -228609519 + AT_rich Low_complexity Low_complexity 1 35 0 1484 164 106 4 chr2 24647098 24647372 -228609211 + AluJb SINE Alu 1 302 -10 400 246 72 14 chr2 24648062 24648200 -228608383 - L1ME LINE L1 -458 5663 5518 813 273 26 18 chr2 24648268 24648495 -228608088 + MIR SINE MIR 5 233 -29 2124 183 137 2 chr2 24648529 24648967 -228607616 + LTR65 LTR ERV1 1 497 -172 2314 109 0 0 chr2 24649239 24649542 -228607041 - AluSx SINE Alu -9 303 1 276 211 18 0 chr2 24650033 24650090 -228606493 - L1MC/D LINE L1 -2056 5752 5695 422 250 42 0 chr2 24650420 24650540 -228606043 - L1ME4a LINE L1 -21 6100 5976 2322 85 2 139 chr2 24650569 24650980 -228605603 - THE1A LTR MaLR 0 355 1 10794 85 7 1 chr2 24650980 24652375 -228604208 - THE1A-int LTR MaLR 0 1580 178 460 243 114 21 chr2 24653310 24653450 -228603133 - L2 LINE L2 -3 3310 3158 351 281 0 0 chr2 24654079 24654161 -228602422 - MIR3 SINE MIR -51 157 76 2396 104 0 0 chr2 24654465 24654774 -228601809 + AluSx SINE Alu 1 309 -3 4814 131 34 1 chr2 24654792 24655487 -228601096 + L1PA13 LINE L1 5408 6130 -33 2413 55 0 3 chr2 24655487 24655778 -228600805 + AluY SINE Alu 3 292 -19 4814 131 34 1 chr2 24655778 24655814 -228600769 + L1PA13 LINE L1 6130 6163 0 310 80 20 0 chr2 24655815 24655865 -228600718 + L1PA13 LINE L1 6112 6162 -1 1979 139 43 23 chr2 24655958 24656260 -228600323 + AluSx SINE Alu 1 308 -4 384 281 114 9 chr2 24656372 24656486 -228600097 + L2 LINE L2 3147 3272 0 2270 119 0 0 chr2 24657722 24658032 -228598551 - AluSq SINE Alu -2 311 2 2337 69 0 7 chr2 24658535 24658823 -228597760 - AluSq SINE Alu -14 299 14 1753 116 98 0 chr2 24658838 24659115 -228597468 - AluY SINE Alu -7 304 1 2962 234 54 50 chr2 24660153 24660759 -228595824 - L1ME3A LINE L1 -26 6144 5542 1898 101 0 85 chr2 24660759 24661065 -228595518 - AluSx SINE Alu -2 310 31 1455 136 72 4 chr2 24661065 24661298 -228595285 - AluYb8 SINE Alu -67 251 1 2962 234 54 50 chr2 24661298 24661712 -228594871 - L1ME3A LINE L1 -627 5543 5121 1509 142 51 70 chr2 24661715 24662031 -228594552 - AluJo SINE Alu -2 310 1 386 245 48 53 chr2 24662107 24662295 -228594288 + HAL1 LINE L1 1994 2180 -327 2876 130 82 13 chr2 24662731 24663208 -228593375 - L1PA16 LINE L1 0 6166 5657 2342 81 3 0 chr2 24663259 24663557 -228593026 + AluSp SINE Alu 1 299 -14 805 172 240 30 chr2 24663638 24663871 -228592712 - MLT1J1 LTR MaLR -163 283 2 316 224 204 0 chr2 24663872 24663970 -228592613 + L2 LINE L2 3194 3311 -2 * 367 311 40 13 chr2 24663966 24664117 -228592466 + MIR SINE MIR 6 160 -102 1404 164 5 5 chr2 24664197 24664417 -228592166 + AluJo SINE Alu 1 220 -92 29 0 0 0 chr2 24664448 24664477 -228592106 + AT_rich Low_complexity Low_complexity 1 29 0 2438 42 0 11 chr2 24664615 24664924 -228591659 - AluY SINE Alu 0 306 1 208 430 39 12 chr2 24666030 24666286 -228590297 - L2 LINE L2 -622 2692 2430 260 270 110 10 chr2 24666341 24666441 -228590142 + MIR SINE MIR 88 197 -65 198 0 0 0 chr2 24666661 24666683 -228589900 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1874 87 21 0 chr2 24666707 24666949 -228589634 - L1PA13 LINE L1 -394 5767 5521 2741 98 8 0 chr2 24666949 24667313 -228589270 + L1PA13 LINE L1 5792 6160 -3 304 121 273 30 chr2 24669065 24669131 -228587452 - MER112 DNA MER1_type -6 254 173 252 0 0 0 chr2 24669179 24669207 -228587376 + (CA)n Simple_repeat Simple_repeat 2 29 0 317 221 15 0 chr2 24669207 24669275 -228587308 - MER112 DNA MER1_type -190 70 2 1074 182 4 74 chr2 24669328 24669496 -228587087 - AluJo SINE Alu -11 301 152 2208 122 0 0 chr2 24669496 24669792 -228586791 - AluSx SINE Alu -16 296 1 1074 182 4 74 chr2 24669792 24669854 -228586729 - AluJo SINE Alu -160 152 87 23 33 0 0 chr2 24669898 24669928 -228586655 + AT_rich Low_complexity Low_complexity 1 30 0 1892 124 0 0 chr2 24669944 24670193 -228586390 + AluSx SINE Alu 42 290 -22 189 107 0 0 chr2 24670193 24670221 -228586362 + (TA)n Simple_repeat Simple_repeat 2 29 0 24 53 0 0 chr2 24670235 24670273 -228586310 + AT_rich Low_complexity Low_complexity 1 38 0 2577 72 0 0 chr2 24670611 24670916 -228585667 + AluY SINE Alu 1 305 -6 2066 125 0 20 chr2 24671188 24671492 -228585091 + AluSx SINE Alu 1 298 -14 446 247 294 4 chr2 24672451 24672706 -228583877 + L2 LINE L2 2174 2502 -812 1702 156 9 55 chr2 24672911 24673238 -228583345 - AluJb SINE Alu 0 312 1 337 295 18 18 chr2 24674115 24674227 -228582356 + L2 LINE L2 3199 3310 -3 21 0 0 0 chr2 24674273 24674294 -228582289 + AT_rich Low_complexity Low_complexity 1 21 0 292 287 46 0 chr2 24674474 24674561 -228582022 - MIR SINE MIR -116 146 56 191 252 92 76 chr2 24674575 24674694 -228581889 + MIR SINE MIR 35 155 -107 1864 149 29 19 chr2 24674738 24674876 -228581707 + AluJo SINE Alu 1 136 -176 2290 104 0 13 chr2 24674876 24675185 -228581398 + AluSx SINE Alu 1 305 -7 1864 149 29 19 chr2 24675185 24675354 -228581229 + AluJo SINE Alu 136 311 -1 186 43 0 0 chr2 24675887 24675910 -228580673 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 225 346 39 68 chr2 24676114 24676447 -228580136 + L2 LINE L2 2739 3063 -209 2385 83 10 0 chr2 24676709 24677010 -228579573 + AluSx SINE Alu 1 304 -8 181 139 0 56 chr2 24677010 24677046 -228579537 - MIR SINE MIR -173 89 56 362 250 55 62 chr2 24677360 24677488 -228579095 + MIR SINE MIR 116 242 -20 186 208 0 0 chr2 24677504 24677552 -228579031 + (CAT)n Simple_repeat Simple_repeat 1 48 0 203 267 0 0 chr2 24678171 24678216 -228578367 - L2 LINE L2 -3 3310 3266 198 276 92 59 chr2 24678283 24678435 -228578148 - MIR SINE MIR -85 177 21 203 189 0 0 chr2 24678704 24678741 -228577842 + T-rich Low_complexity Low_complexity 1 37 0 2504 64 0 0 chr2 24679588 24679884 -228576699 + AluY SINE Alu 1 296 -15 2014 114 10 23 chr2 24680003 24680302 -228576281 + AluSx SINE Alu 1 295 -17 2333 77 3 13 chr2 24680302 24680601 -228575982 + AluSg SINE Alu 1 296 -14 24 0 0 0 chr2 24681526 24681550 -228575033 + AT_rich Low_complexity Low_complexity 1 24 0 897 164 11 32 chr2 24681674 24681871 -228574712 + L1MC3 LINE L1 7613 7785 0 480 286 89 17 chr2 24682354 24682601 -228573982 - L1ME3A LINE L1 -264 5906 5645 1667 294 39 10 chr2 24682755 24683242 -228573341 - MLT1J LTR MaLR -3 508 8 360 152 45 89 chr2 24683306 24683418 -228573165 - L1ME4a LINE L1 -66 6055 5949 2546 90 48 25 chr2 24683469 24683825 -228572758 - THE1B LTR MaLR 0 364 1 216 316 158 9 chr2 24684377 24684491 -228572092 - L2 LINE L2 -4 3309 3179 814 194 0 0 chr2 24684510 24684639 -228571944 + FLAM_C SINE Alu 1 129 -4 818 263 79 4 chr2 24684644 24684872 -228571711 - MIR SINE MIR -17 245 1 1969 175 19 30 chr2 24684975 24685341 -228571242 - MLT1A1 LTR MaLR 0 365 4 1572 169 6 98 chr2 24685597 24685934 -228570649 - AluJo SINE Alu -6 306 1 343 340 0 0 chr2 24686301 24686395 -228570188 - L2 LINE L2 -494 2820 2727 757 147 7 73 chr2 24686396 24686546 -228570037 + AluJo SINE Alu 84 223 -89 24 0 0 0 chr2 24687235 24687259 -228569324 + AT_rich Low_complexity Low_complexity 1 24 0 346 291 95 25 chr2 24687324 24687482 -228569101 + L1MEd LINE L1 417 585 -5945 724 224 90 0 chr2 24687874 24688016 -228568567 + L1ME3 LINE L1 5148 5315 -831 195 42 0 0 chr2 24688016 24688040 -228568543 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 724 224 90 0 chr2 24688040 24688098 -228568485 + L1ME3 LINE L1 5315 5366 -780 2227 117 0 0 chr2 24688099 24688397 -228568186 + AluSx SINE Alu 1 298 -14 247 219 20 1 chr2 24688398 24688687 -228567896 + L1ME3 LINE L1 5819 6104 -72 1759 126 82 7 chr2 24688687 24688957 -228567626 + AluJb SINE Alu 1 290 -22 247 219 20 1 chr2 24688957 24688968 -228567615 + L1ME3 LINE L1 6104 6113 -63 505 105 0 13 chr2 24688974 24689050 -228567533 - AluSg/x SINE Alu -18 292 218 273 29 0 0 chr2 24689068 24689102 -228567481 + (CA)n Simple_repeat Simple_repeat 1 34 0 1849 94 3 84 chr2 24689103 24689400 -228567183 + AluY SINE Alu 21 293 -18 886 276 72 32 chr2 24689480 24689978 -228566605 + L1MEd LINE L1 1304 1941 -960 2435 77 0 0 chr2 24689978 24690276 -228566307 + AluY SINE Alu 1 298 -13 886 276 72 32 chr2 24690276 24690403 -228566180 + L1MEd LINE L1 1941 2061 -840 677 116 0 0 chr2 24690714 24690809 -228565774 + AluS SINE Alu 5 99 -214 318 336 8 0 chr2 24690974 24691105 -228565478 + L1MEd LINE L1 2443 2574 -3966 1638 165 11 25 chr2 24691111 24691396 -228565187 + AluJo SINE Alu 1 281 -31 * 2343 97 3 7 chr2 24691395 24691693 -228564890 - AluSg SINE Alu -13 297 1 1845 169 0 13 chr2 24691927 24692234 -228564349 + AluJo SINE Alu 1 303 -9 2360 94 0 3 chr2 24692236 24692545 -228564038 + AluSc SINE Alu 1 308 -1 811 221 23 0 chr2 24692583 24692755 -228563828 - AluJb SINE Alu 0 312 137 251 286 0 24 chr2 24692772 24692856 -228563727 + L2 LINE L2 3228 3309 -4 396 299 29 59 chr2 24692872 24693280 -228563303 + L1MEd LINE L1 2851 3246 -3294 2005 127 21 0 chr2 24693409 24693733 -228562850 + AluSx SINE Alu 4 312 0 21 57 0 0 chr2 24693837 24693872 -228562711 + AT_rich Low_complexity Low_complexity 1 35 0 752 257 68 89 chr2 24694019 24694449 -228562134 + L1MEd LINE L1 4025 4441 -2099 1203 170 158 19 chr2 24694449 24694595 -228561988 + AluJb SINE Alu 1 125 -177 2264 116 0 3 chr2 24694595 24694896 -228561687 + AluSx SINE Alu 1 300 -12 1203 170 158 19 chr2 24694896 24695014 -228561569 + AluJb SINE Alu 125 302 0 752 257 68 89 chr2 24695014 24695167 -228561416 + L1MEd LINE L1 4441 4596 -1944 3517 189 34 60 chr2 24695168 24696039 -228560544 - L1MCb LINE L1 -4958 1087 239 243 200 29 57 chr2 24696041 24696111 -228560472 + Charlie1 DNA MER1_type 1589 1656 -1105 58 38 0 0 chr2 24696111 24696190 -228560393 + AT_rich Low_complexity Low_complexity 1 79 0 864 119 0 0 chr2 24696193 24696311 -228560272 - FLAM_C SINE Alu -15 118 1 4972 171 69 31 chr2 24696312 24696326 -228560257 + Charlie1 DNA MER1_type 1630 1642 -1119 2332 108 0 0 chr2 24696326 24696623 -228559960 - AluSx SINE Alu -15 297 1 4972 171 69 31 chr2 24696623 24697694 -228558889 + Charlie1 DNA MER1_type 1642 2756 -5 2291 94 0 0 chr2 24697718 24698005 -228558578 + AluSg SINE Alu 1 287 -23 25 31 0 0 chr2 24698140 24698172 -228558411 + AT_rich Low_complexity Low_complexity 1 32 0 2070 132 3 0 chr2 24698196 24698492 -228558091 + AluSx SINE Alu 1 297 -15 2344 105 3 0 chr2 24698655 24698961 -228557622 + AluSc SINE Alu 1 307 -2 1490 138 176 0 chr2 24701319 24701558 -228555025 + AluJo SINE Alu 1 281 -31 233 359 63 0 chr2 24701943 24702085 -228554498 - MIR3 SINE MIR -21 187 37 207 100 0 0 chr2 24702319 24702349 -228554234 + (CAAGA)n Simple_repeat Simple_repeat 4 33 0 548 175 126 0 chr2 24702361 24702464 -228554119 - FLAM_A SINE Alu -17 116 1 321 336 23 8 chr2 24702596 24702724 -228553859 + MIR SINE MIR 21 150 -58 2281 116 0 22 chr2 24702797 24703116 -228553467 + AluSq SINE Alu 1 312 -1 1869 167 0 3 chr2 24704058 24704352 -228552231 + AluJb SINE Alu 1 293 -19 666 186 53 112 chr2 24704406 24704530 -228552053 - MSTD LTR MaLR -2 394 264 1575 140 140 4 chr2 24704530 24704794 -228551789 - AluSg SINE Alu 0 300 1 1996 151 3 3 chr2 24704800 24705104 -228551479 - AluJb SINE Alu -8 304 1 666 186 53 112 chr2 24705104 24705160 -228551423 - MSTD LTR MaLR -137 259 218 1068 194 16 52 chr2 24705198 24705446 -228551137 - MSTD LTR MaLR -157 239 1 219 380 9 0 chr2 24705618 24705731 -228550852 - L2 LINE L2 -779 2535 2422 378 267 42 42 chr2 24705782 24705902 -228550681 + MARNA DNA Mariner 110 229 -357 186 348 51 51 chr2 24705930 24706048 -228550535 - L2 LINE L2 -6 3266 3149 201 152 0 0 chr2 24706388 24706421 -228550162 + (CA)n Simple_repeat Simple_repeat 1 33 0 1979 102 36 7 chr2 24706599 24706910 -228549673 + AluSg SINE Alu 2 320 0 443 320 152 36 chr2 24707062 24707126 -228549457 - L2 LINE L2 -10 3303 3248 1638 140 57 21 chr2 24707126 24707405 -228549178 - AluSx SINE Alu -19 293 5 443 320 152 36 chr2 24707405 24707787 -228548796 - L2 LINE L2 -65 3248 2805 2370 66 21 0 chr2 24707818 24708106 -228548477 + AluY SINE Alu 1 294 -17 209 222 16 0 chr2 24708141 24708204 -228548379 + (CA)n Simple_repeat Simple_repeat 2 65 0 302 195 345 18 chr2 24708204 24708317 -228548266 - MARNA DNA Mariner -422 164 15 256 345 18 0 chr2 24708795 24708905 -228547678 - L1ME LINE L1 -309 5855 5744 2202 105 0 3 chr2 24708919 24709205 -228547378 - AluSx SINE Alu -7 305 21 195 42 0 0 chr2 24710161 24710185 -228546398 + (A)n Simple_repeat Simple_repeat 1 24 0 2191 105 0 3 chr2 24710313 24710607 -228545976 + AluSg SINE Alu 17 309 -1 657 183 0 8 chr2 24711221 24711347 -228545236 + MLT2D LTR ERVL 3 127 -287 2063 126 14 0 chr2 24711347 24711632 -228544951 + AluSq SINE Alu 1 289 -24 189 0 0 0 chr2 24711632 24711653 -228544930 + (GA)n Simple_repeat Simple_repeat 2 22 0 661 151 12 84 chr2 24711733 24711899 -228544684 - MER3 DNA MER1_type 0 2624 2471 396 154 0 99 chr2 24711902 24711993 -228544590 - MER3 DNA MER1_type -95 114 33 451 283 100 6 chr2 24712729 24712909 -228543674 + LTR67 LTR ERVL 354 550 -7 637 291 90 4 chr2 24712986 24713230 -228543353 + L1MC/D LINE L1 5498 5762 -2046 200 231 77 0 chr2 24713738 24713790 -228542793 - MER91C DNA MER1_type -42 98 43 663 94 19 38 chr2 24714008 24714114 -228542469 - Tigger7 DNA MER2_type 0 2487 2384 2163 133 0 0 chr2 24714119 24714420 -228542163 - AluSx SINE Alu -11 301 1 2551 62 0 7 chr2 24714556 24714863 -228541720 + AluY SINE Alu 1 305 -6 28 29 0 0 chr2 24714938 24714973 -228541610 + AT_rich Low_complexity Low_complexity 1 35 0 1800 152 10 28 chr2 24715114 24715403 -228541180 + AluJb SINE Alu 1 284 -28 303 28 0 0 chr2 24715407 24715443 -228541140 + (CA)n Simple_repeat Simple_repeat 2 37 0 1912 158 10 6 chr2 24715737 24716048 -228540535 + AluSx SINE Alu 1 312 0 2226 161 3 6 chr2 24716241 24716601 -228539982 - LOR1b LTR ERV1 0 461 103 1834 124 3 64 chr2 24716601 24716915 -228539668 + AluSx SINE Alu 18 312 0 284 247 74 12 chr2 24716991 24717072 -228539511 + HAL1 LINE L1 20 105 -2402 1571 248 35 63 chr2 24717101 24717622 -228538961 - LTR33 LTR ERVL -2 519 14 361 319 58 62 chr2 24717759 24717884 -228538699 + HAL1 LINE L1 276 401 -2106 2219 123 0 16 chr2 24717884 24718200 -228538383 - AluSx SINE Alu -1 311 1 361 319 58 62 chr2 24718200 24718315 -228538268 + HAL1 LINE L1 401 515 -1992 419 236 79 140 chr2 24718360 24718653 -228537930 + HAL1 LINE L1 1982 2227 -280 1888 163 3 14 chr2 24718653 24718948 -228537635 + AluJo SINE Alu 1 292 -20 419 236 79 140 chr2 24718948 24719210 -228537373 + HAL1 LINE L1 2227 2503 -4 1708 167 33 0 chr2 24719221 24719497 -228537086 - AluJo SINE Alu -23 289 5 1430 256 67 40 chr2 24719549 24720465 -228536118 + L1ME LINE L1 532 1461 -4619 2410 83 3 0 chr2 24720466 24720767 -228535816 + AluSx SINE Alu 1 302 -10 544 145 11 0 chr2 24720780 24720881 -228535702 + L1MB3 LINE L1 5385 5486 -682 637 197 0 16 chr2 24720900 24721022 -228535561 + AluSq/x SINE Alu 15 134 -178 3396 130 42 35 chr2 24721032 24721158 -228535425 + L1MB3 LINE L1 5483 5607 -576 2173 125 0 13 chr2 24721158 24721463 -228535120 + AluSx SINE Alu 1 301 -11 3396 130 42 35 chr2 24721463 24721532 -228535051 + L1MB3 LINE L1 5607 5674 -509 2341 103 0 0 chr2 24721532 24721834 -228534749 + AluSg SINE Alu 1 302 -8 3396 130 42 35 chr2 24721834 24722226 -228534357 + L1MB3 LINE L1 5674 6078 -105 3502 135 52 74 chr2 24722226 24722606 -228533977 + LTR8A LTR ERV1 1 359 -368 1784 163 29 0 chr2 24722606 24722883 -228533700 - AluSx SINE Alu -11 301 17 3502 135 52 74 chr2 24722883 24723245 -228533338 + LTR8A LTR ERV1 359 727 0 3396 130 42 35 chr2 24723245 24723276 -228533307 + L1MB3 LINE L1 6078 6107 -76 1205 162 0 0 chr2 24723277 24723462 -228533121 + AluSg/x SINE Alu 116 300 -12 424 133 13 0 chr2 24723462 24723537 -228533046 + L1MB2 LINE L1 6093 6168 -3 290 221 52 0 chr2 24723547 24723624 -228532959 + L1ME LINE L1 1492 1572 -4689 516 101 63 0 chr2 24723706 24723785 -228532798 + AluS SINE Alu 2 85 -228 1279 168 0 59 chr2 24723797 24724035 -228532548 - AluJb SINE Alu -88 224 1 5106 160 60 0 chr2 24724138 24724609 -228531974 + L1M1 LINE L1 1271 1815 -5750 387 0 0 0 chr2 24724609 24724652 -228531931 + (GA)n Simple_repeat Simple_repeat 2 44 0 5106 160 60 0 chr2 24724652 24725007 -228531576 + L1M1 LINE L1 1815 2147 -5418 1777 88 21 121 chr2 24725006 24725141 -228531442 + L1MA2 LINE L1 5925 6072 -232 * 2052 85 19 65 chr2 24725141 24725448 -228531135 + AluSq SINE Alu 5 297 -16 1777 88 21 121 chr2 24725448 24725518 -228531065 + L1MA2 LINE L1 6072 6147 -157 180 0 0 0 chr2 24725518 24725538 -228531045 + (TA)n Simple_repeat Simple_repeat 2 21 0 1960 124 3 18 chr2 24725542 24725825 -228530758 - AluJo SINE Alu -33 279 1 1777 88 21 121 chr2 24725825 24725865 -228530718 + L1MA2 LINE L1 6150 6192 -112 1603 141 112 11 chr2 24725865 24726141 -228530442 + AluSx SINE Alu 1 304 -8 1777 88 21 121 chr2 24726141 24726261 -228530322 + L1MA2 LINE L1 6192 6260 -44 21 0 0 0 chr2 24726278 24726299 -228530284 + AT_rich Low_complexity Low_complexity 1 21 0 1088 121 90 0 chr2 24726299 24726465 -228530118 + AluSx SINE Alu 1 181 -131 421 40 0 0 chr2 24726466 24726516 -228530067 + AluSp/q SINE Alu 216 265 -48 2063 29 0 0 chr2 24726516 24726755 -228529828 + L1PA4 LINE L1 5914 6152 -3 239 94 113 0 chr2 24726761 24726814 -228529769 + L1MA3 LINE L1 6246 6304 -1 1818 122 0 4 chr2 24726916 24727171 -228529412 - AluSg SINE Alu -5 305 52 342 256 248 15 chr2 24727330 24727463 -228529120 - MER5A DNA MER1_type 0 189 26 2141 103 0 0 chr2 24727986 24728267 -228528316 + AluSx SINE Alu 1 281 -31 2313 106 7 0 chr2 24728321 24728623 -228527960 + AluSx SINE Alu 1 304 -8 1867 159 90 45 chr2 24728674 24728695 -228527888 - MER31B LTR ERV1 0 466 447 2374 111 0 0 chr2 24728695 24729002 -228527581 + AluSx SINE Alu 1 307 -5 1867 159 90 45 chr2 24729002 24729426 -228527157 - MER31B LTR ERV1 -19 447 1 201 178 0 0 chr2 24729757 24729802 -228526781 + (CA)n Simple_repeat Simple_repeat 2 46 0 2333 103 0 0 chr2 24729885 24730185 -228526398 - AluSx SINE Alu -10 302 3 187 282 86 60 chr2 24730384 24730450 -228526133 - MIR SINE MIR -114 148 76 2365 58 41 7 chr2 24730450 24730745 -228525838 + AluY SINE Alu 1 305 -6 187 282 86 60 chr2 24730745 24730795 -228525788 - MIR SINE MIR -186 76 29 2467 87 3 0 chr2 24730943 24731252 -228525331 + AluSp SINE Alu 1 310 -3 2153 90 24 7 chr2 24731482 24731770 -228524813 + AluSq SINE Alu 1 293 -20 2337 100 0 0 chr2 24731780 24732081 -228524502 + AluSq SINE Alu 1 301 -12 311 210 225 22 chr2 24732091 24732229 -228524354 + MER53 DNA DNA 1 166 -23 258 176 0 0 chr2 24732278 24732329 -228524254 + GA-rich Low_complexity Low_complexity 1 51 0 1904 119 3 66 chr2 24732480 24732802 -228523781 - AluSx SINE Alu 0 303 1 744 226 101 76 chr2 24732853 24733080 -228523503 + L1ME4a LINE L1 5564 5784 -337 2003 152 0 7 chr2 24733080 24733377 -228523206 + AluSx SINE Alu 1 295 -17 744 226 101 76 chr2 24733377 24733556 -228523027 + L1ME4a LINE L1 5784 5988 -133 1919 95 42 4 chr2 24733556 24733847 -228522736 - AluSc SINE Alu 0 309 12 744 226 101 76 chr2 24733847 24733966 -228522617 + L1ME4a LINE L1 5988 6103 -18 2239 128 0 0 chr2 24733973 24734277 -228522306 - AluSx SINE Alu -8 304 1 288 0 0 0 chr2 24734670 24734702 -228521881 + (TG)n Simple_repeat Simple_repeat 1 32 0 948 71 0 0 chr2 24734702 24734815 -228521768 - AluY SINE Alu -31 280 168 2177 118 3 3 chr2 24735087 24735391 -228521192 + AluSx SINE Alu 2 305 -7 2075 104 11 7 chr2 24735393 24735519 -228521064 + AluSg SINE Alu 1 125 -178 477 0 0 0 chr2 24735519 24735572 -228521011 + (CA)n Simple_repeat Simple_repeat 2 54 0 2075 104 11 7 chr2 24735572 24735747 -228520836 + AluSg SINE Alu 125 303 0 4565 164 32 30 chr2 24735769 24736580 -228520003 - MER21B LTR ERV1 -50 813 1 1392 160 53 42 chr2 24736604 24736772 -228519811 - AluJo SINE Alu -18 294 120 225 0 0 0 chr2 24736772 24736797 -228519786 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1392 160 53 42 chr2 24736797 24736891 -228519692 - AluJo SINE Alu -192 120 29 2441 96 0 0 chr2 24737011 24737323 -228519260 - AluSx SINE Alu 0 312 1 1875 172 0 3 chr2 24737434 24737742 -228518841 - AluJb SINE Alu -3 309 3 2455 80 3 0 chr2 24738292 24738594 -228517989 + AluY SINE Alu 1 303 -8 2411 92 0 0 chr2 24738606 24738901 -228517682 + AluSc SINE Alu 3 297 -12 1077 166 0 17 chr2 24738924 24739099 -228517484 - FRAM SINE Alu -7 169 1 1870 150 0 7 chr2 24739213 24739506 -228517077 - AluJb SINE Alu -21 291 1 2356 105 0 0 chr2 24739890 24740196 -228516387 - AluSx SINE Alu -6 306 1 1300 88 0 0 chr2 24740472 24740631 -228515952 + AluSg/x SINE Alu 132 290 -20 1483 169 75 7 chr2 24740640 24740918 -228515665 + AluJb SINE Alu 2 298 -14 265 227 80 0 chr2 24741085 24741160 -228515423 + MLT1L LTR MaLR 535 615 0 331 306 0 36 chr2 24741802 24741913 -228514670 + L2 LINE L2 3207 3313 0 26 50 0 0 chr2 24742018 24742058 -228514525 + AT_rich Low_complexity Low_complexity 1 40 0 1297 184 5 0 chr2 24742080 24742297 -228514286 - MLT1A1 LTR MaLR 0 365 148 1693 107 25 8 chr2 24742298 24742542 -228514041 - AluSc SINE Alu -12 297 50 1784 120 0 4 chr2 24742542 24742784 -228513799 - AluSc SINE Alu -68 241 1 1864 145 4 0 chr2 24742792 24743061 -228513522 - AluSg SINE Alu -11 299 30 831 122 88 20 chr2 24743119 24743267 -228513316 + MLT1A1 LTR MaLR 3 160 -205 2346 69 13 7 chr2 24743267 24743571 -228513012 + AluSc SINE Alu 1 306 -3 2154 99 0 7 chr2 24743590 24743941 -228512642 + AluSx SINE Alu 1 349 0 354 227 13 0 chr2 24744500 24744575 -228512008 + AluJ/FLAM SINE Alu 1 76 -226 193 275 176 22 chr2 24744861 24744952 -228511631 + MIR SINE MIR 158 262 0 32 0 0 0 chr2 24745576 24745608 -228510975 + AT_rich Low_complexity Low_complexity 1 32 0 225 325 12 0 chr2 24745879 24745962 -228510621 + L1MEc LINE L1 1729 1812 -4584 25 31 0 0 chr2 24745988 24746020 -228510563 + AT_rich Low_complexity Low_complexity 1 32 0 2302 99 0 3 chr2 24746022 24746324 -228510259 + AluSq SINE Alu 13 313 0 377 293 81 65 chr2 24746845 24747152 -228509431 - L2 LINE L2 -2563 751 440 267 222 278 0 chr2 24747694 24747766 -228508817 + MER117 DNA MER1_type 1 92 -105 2304 76 13 25 chr2 24748266 24748582 -228508001 + AluSx SINE Alu 1 312 0 2388 78 0 0 chr2 24748635 24748930 -228507653 - AluSq SINE Alu -18 295 1 448 270 132 93 chr2 24749585 24750425 -228506158 - L1M2 LINE L1 -5445 1404 532 189 74 0 0 chr2 24750727 24750754 -228505829 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 438 296 97 23 chr2 24751915 24752131 -228504452 - MIR SINE MIR -12 250 19 2201 81 20 7 chr2 24752180 24752477 -228504106 + AluSg SINE Alu 2 302 -8 6740 73 11 21 chr2 24752776 24753471 -228503112 - L1PA8A LINE L1 -3 6128 5427 2163 91 39 0 chr2 24753471 24753756 -228502827 - AluSq SINE Alu -17 296 1 6740 73 11 21 chr2 24753756 24754013 -228502570 - L1PA8A LINE L1 -704 5427 5169 1834 131 64 17 chr2 24754013 24754171 -228502412 - AluSx SINE Alu -1 311 162 2332 81 10 7 chr2 24754171 24754467 -228502116 - AluSq SINE Alu -16 297 1 1834 131 64 17 chr2 24754467 24754605 -228501978 - AluSx SINE Alu -150 162 1 6740 73 11 21 chr2 24754605 24755043 -228501540 - L1PA8A LINE L1 -962 5169 4753 684 220 148 19 chr2 24755674 24755883 -228500700 + MIR SINE MIR 10 245 -17 246 188 50 38 chr2 24756426 24756506 -228500077 - L1MB8 LINE L1 -6 6172 6092 * 693 293 48 11 chr2 24756502 24756772 -228499811 - L1ME LINE L1 -357 5764 5485 1304 139 94 66 chr2 24756780 24757067 -228499516 - AluJb SINE Alu -10 302 8 3279 163 33 17 chr2 24758180 24758868 -228497715 - Tigger7 DNA MER2_type 0 2587 1 220 292 146 0 chr2 24758868 24758964 -228497619 - MIR SINE MIR -114 148 39 188 221 263 11 chr2 24759006 24759101 -228497482 - L2 LINE L2 -10 3303 3185 3818 133 26 48 chr2 24759357 24760041 -228496542 - L1MB7 LINE L1 0 6184 5516 314 81 0 20 chr2 24760689 24760744 -228495839 + MER41A LTR ERV1 390 440 -114 285 29 0 0 chr2 24761240 24761274 -228495309 + (ATG)n Simple_repeat Simple_repeat 2 35 0 807 179 0 0 chr2 24761279 24761402 -228495181 - FLAM_C SINE Alu -19 124 2 2069 81 67 50 chr2 24761899 24762197 -228494386 + AluSq SINE Alu 2 304 -9 1464 209 13 17 chr2 24762297 24762598 -228493985 - AluJo SINE Alu -12 300 1 285 280 86 16 chr2 24762678 24762691 -228493892 - L1ME4a LINE L1 -207 5914 5903 2189 106 3 0 chr2 24762691 24762983 -228493600 - AluSp SINE Alu -20 293 1 285 280 86 16 chr2 24762983 24763226 -228493357 - L1ME4a LINE L1 -218 5903 5640 2257 114 0 0 chr2 24763226 24763533 -228493050 + AluSg SINE Alu 2 308 -2 951 182 30 10 chr2 24763630 24763828 -228492755 - L1MC2 LINE L1 0 6344 6143 1827 178 63 39 chr2 24763835 24764245 -228492338 - L1MC3 LINE L1 -191 7594 7175 1134 181 73 26 chr2 24765186 24765408 -228491175 + MER33 DNA MER1_type 4 245 -2340 2191 139 0 0 chr2 24765408 24765718 -228490865 - AluSx SINE Alu -2 310 1 1134 181 73 26 chr2 24765718 24765798 -228490785 + MER33 DNA MER1_type 245 320 -4 604 292 152 16 chr2 24765804 24766417 -228490166 + L1ME4a LINE L1 5316 6011 -110 329 219 71 90 chr2 24766722 24766877 -228489706 + L1ME3A LINE L1 5570 5721 -400 26 30 0 0 chr2 24767135 24767168 -228489415 + AT_rich Low_complexity Low_complexity 1 33 0 1818 158 7 7 chr2 24767281 24767579 -228489004 - AluJb SINE Alu -14 298 1 1391 162 29 55 chr2 24767927 24768199 -228488384 + AluJb SINE Alu 39 303 -9 1540 138 107 11 chr2 24768528 24768789 -228487794 - AluSx SINE Alu -24 288 3 404 328 130 42 chr2 24768993 24769401 -228487182 + L2 LINE L2 2149 2592 -722 611 258 94 9 chr2 24769678 24769891 -228486692 + L1ME3A LINE L1 5857 6087 -83 2262 102 3 0 chr2 24769893 24770188 -228486395 - AluSx SINE Alu -16 296 1 1669 181 0 50 chr2 24770327 24770647 -228485936 - AluJo SINE Alu -8 304 1 1761 149 57 4 chr2 24770900 24771181 -228485402 - AluSc SINE Alu -13 296 1 686 205 8 0 chr2 24771555 24771677 -228484906 - FLAM_C SINE Alu -19 124 2 210 128 0 0 chr2 24771711 24771750 -228484833 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 2832 120 22 29 chr2 24771837 24772436 -228484147 - MER4E LTR ERV1 0 779 1 841 184 0 22 chr2 24772598 24772734 -228483849 + FLAM_A SINE Alu 1 133 0 2407 79 0 3 chr2 24772738 24773030 -228483553 + AluSg SINE Alu 1 291 -19 356 200 12 0 chr2 24773031 24773116 -228483467 + (TA)n Simple_repeat Simple_repeat 1 86 0 225 347 84 0 chr2 24773507 24773602 -228482981 - L2 LINE L2 0 3313 3211 2520 59 0 3 chr2 24774125 24774428 -228482155 - AluY SINE Alu -9 302 1 2174 80 28 0 chr2 24774456 24774743 -228481840 + AluSx SINE Alu 1 295 -17 1647 194 0 3 chr2 24774754 24775043 -228481540 + AluJb SINE Alu 1 288 -24 276 235 210 25 chr2 24775045 24775164 -228481419 + MIR3 SINE MIR 23 163 -45 2900 6 0 0 chr2 24775295 24775606 -228480977 - AluY SINE Alu 0 311 1 1546 116 0 19 chr2 24775983 24776029 -228480554 + AluSg/x SINE Alu 89 134 -176 2270 109 0 0 chr2 24776029 24776331 -228480252 + AluSx SINE Alu 1 302 -10 1546 116 0 19 chr2 24776331 24776499 -228480084 + AluSg/x SINE Alu 134 299 -11 440 269 167 32 chr2 24777223 24777409 -228479174 + MIR SINE MIR 25 235 -27 2234 101 7 0 chr2 24778130 24778426 -228478157 - AluSq SINE Alu -15 298 1 2378 102 0 3 chr2 24779015 24779319 -228477264 + AluSq SINE Alu 1 303 -10 2315 103 0 0 chr2 24779321 24779622 -228476961 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr2 24780645 24780666 -228475917 + AT_rich Low_complexity Low_complexity 1 21 0 1974 116 54 0 chr2 24780821 24780936 -228475647 + AluSx SINE Alu 1 108 -204 207 0 0 0 chr2 24780936 24780959 -228475624 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1974 116 54 0 chr2 24780959 24781137 -228475446 + AluSx SINE Alu 108 310 -2 492 239 168 14 chr2 24781244 24781453 -228475130 - MIR SINE MIR -3 259 19 2005 159 0 0 chr2 24781625 24781920 -228474663 + AluSx SINE Alu 1 295 -17 2036 131 13 10 chr2 24782790 24783102 -228473481 + AluSq SINE Alu 1 313 0 25 0 0 0 chr2 24783786 24783811 -228472772 + AT_rich Low_complexity Low_complexity 1 25 0 348 148 0 0 chr2 24784418 24784479 -228472104 + (TG)n Simple_repeat Simple_repeat 2 62 0 1821 167 3 7 chr2 24784966 24785260 -228471323 - AluJo SINE Alu -19 293 1 1625 134 21 35 chr2 24785508 24785791 -228470792 - AluJb SINE Alu -4 308 30 270 0 0 0 chr2 24786122 24786152 -228470431 + (TTTAA)n Simple_repeat Simple_repeat 3 32 0 2320 77 0 0 chr2 24786152 24786437 -228470146 - AluY SINE Alu -26 285 1 3641 196 60 33 chr2 24786688 24787965 -228468618 - L1ME1 LINE L1 -30 6136 4823 807 297 18 0 chr2 24787994 24788223 -228468360 + MIR SINE MIR 29 261 -1 235 285 73 57 chr2 24788228 24788351 -228468232 - MIR SINE MIR -62 200 76 824 231 83 23 chr2 24788360 24788576 -228468007 + MIR SINE MIR 23 251 -11 533 213 28 9 chr2 24789231 24789339 -228467244 - LTR40a LTR ERVL -407 112 3 981 212 107 9 chr2 24789349 24789620 -228466963 - HERVL40 LTR ERVL -8 5522 2837 1693 122 30 104 chr2 24789637 24789832 -228466751 - AluJo SINE Alu 0 312 151 2910 13 0 0 chr2 24789832 24790150 -228466433 - AluYb8 SINE Alu 0 318 1 1693 122 30 104 chr2 24790150 24790291 -228466292 - AluJo SINE Alu -161 151 1 380 121 0 0 chr2 24790419 24790477 -228466106 - HERVL40 LTR ERVL -254 2783 2726 349 260 92 104 chr2 24790572 24791168 -228465415 - HERVL40 LTR ERVL -347 4660 2202 1196 206 4 74 chr2 24791218 24791247 -228465336 - HERVL40 LTR ERVL -1240 4290 4261 2201 127 9 35 chr2 24791247 24791593 -228464990 - MER1B DNA MER1_type 0 337 1 1196 206 4 74 chr2 24791593 24791981 -228464602 - HERVL40 LTR ERVL -1269 4261 3806 1663 126 15 31 chr2 24791981 24792242 -228464341 + AluJb SINE Alu 40 296 -16 1196 206 4 74 chr2 24792242 24792298 -228464285 - HERVL40 LTR ERVL -1724 3806 3748 534 198 58 0 chr2 24792319 24792440 -228464143 + L1MC1 LINE L1 6206 6333 0 478 227 153 12 chr2 24792444 24792607 -228463976 - HERVL40 LTR ERVL -1808 3722 3537 733 243 44 11 chr2 24792618 24792799 -228463784 - HERVL40 LTR ERVL -2118 3412 3226 1078 228 102 22 chr2 24792817 24792987 -228463596 - HERVL40 LTR ERVL -2060 977 1168 2226 99 0 13 chr2 24792987 24793289 -228463294 - AluSq SINE Alu -15 298 1 1078 228 102 22 chr2 24793289 24793586 -228462997 - HERVL40 LTR ERVL -1868 1169 897 764 174 22 11 chr2 24793627 24793805 -228462778 + L1MD3 LINE L1 7816 7995 0 2197 91 0 14 chr2 24793809 24794125 -228462458 + AluSc SINE Alu 3 309 0 214 376 44 76 chr2 24794290 24794443 -228462140 + L2 LINE L2 2941 3097 -175 1617 175 53 22 chr2 24794443 24794803 -228461780 - THE1C LTR MaLR 0 375 5 214 376 44 76 chr2 24794803 24794992 -228461591 + L2 LINE L2 3097 3272 0 817 289 54 8 chr2 24795803 24796042 -228460541 - MIR SINE MIR -11 251 2 1531 269 42 9 chr2 24796080 24796511 -228460072 - LTR40c LTR ERVL -16 449 5 1497 157 57 23 chr2 24797043 24797305 -228459278 + AluJo SINE Alu 31 301 -11 293 226 32 86 chr2 24797615 24797708 -228458875 + L2 LINE L2 3185 3272 0 344 238 79 16 chr2 24798337 24798463 -228458120 - MER94 DNA DNA 0 134 1 815 181 14 0 chr2 24798855 24798993 -228457590 + FAM SINE Alu 13 152 -33 225 0 0 0 chr2 24799300 24799325 -228457258 + (TG)n Simple_repeat Simple_repeat 2 26 0 26 30 0 0 chr2 24800255 24800288 -228456295 + AT_rich Low_complexity Low_complexity 1 33 0 451 290 87 27 chr2 24800597 24800780 -228455803 + MIR SINE MIR 53 246 -16 2056 101 3 42 chr2 24800888 24801196 -228455387 + AluSx SINE Alu 1 296 -16 1800 166 66 9 chr2 24801220 24801539 -228455044 - MER1B DNA MER1_type 0 337 1 50 31 0 0 chr2 24801566 24801630 -228454953 + AT_rich Low_complexity Low_complexity 1 64 0 328 324 89 11 chr2 24802783 24802962 -228453621 + L1ME3A LINE L1 5963 6155 -15 507 185 38 70 chr2 24803027 24803184 -228453399 + MER104 DNA Tc2 29 180 0 2466 75 0 0 chr2 24803284 24803578 -228453005 + AluSc SINE Alu 1 294 -15 692 195 49 0 chr2 24803588 24803711 -228452872 + FLAM_A SINE Alu 1 129 -4 1155 226 100 9 chr2 24803767 24804107 -228452476 + L1ME3 LINE L1 5736 6106 -56 2186 129 0 0 chr2 24804108 24804403 -228452180 + AluSx SINE Alu 1 295 -17 1942 92 92 3 chr2 24804786 24805068 -228451515 - AluSx SINE Alu -5 307 1 204 343 105 9 chr2 24805144 24805249 -228451334 - L2 LINE L2 -2 3270 3156 25 65 0 0 chr2 24805886 24805932 -228450651 + AT_rich Low_complexity Low_complexity 1 46 0 194 304 101 0 chr2 24806324 24806393 -228450190 + L2 LINE L2 3150 3225 -47 4021 142 56 7 chr2 24806774 24807540 -228449043 - Tigger3b DNA MER2_type -426 805 2 2437 51 0 3 chr2 24807889 24808215 -228448368 + AluY SINE Alu 1 311 0 1773 167 13 3 chr2 24808565 24808864 -228447719 + AluJo SINE Alu 1 302 -10 264 274 78 29 chr2 24808879 24808981 -228447602 - MIR SINE MIR -64 144 38 24 32 0 0 chr2 24809302 24809333 -228447250 + AT_rich Low_complexity Low_complexity 1 31 0 2095 99 42 3 chr2 24809669 24809952 -228446631 - AluSq SINE Alu -19 294 1 1490 126 0 14 chr2 24811139 24811361 -228445222 + AluJb SINE Alu 85 303 -9 2051 103 9 66 chr2 24811792 24811935 -228444648 + AluSx SINE Alu 1 150 -162 2246 102 10 0 chr2 24811935 24812229 -228444354 + AluSg SINE Alu 1 297 -13 2051 103 9 66 chr2 24812229 24812405 -228444178 + AluSx SINE Alu 150 302 -10 372 347 34 14 chr2 24812496 24812643 -228443940 + MIR3 SINE MIR 13 162 -46 21 0 0 0 chr2 24813182 24813203 -228443380 + AT_rich Low_complexity Low_complexity 1 21 0 1887 164 28 45 chr2 24813624 24814020 -228442563 - MLT1B LTR MaLR 0 390 2 21 36 0 0 chr2 24814490 24814518 -228442065 + AT_rich Low_complexity Low_complexity 1 28 0 2106 121 0 7 chr2 24814779 24815077 -228441506 + AluSx SINE Alu 1 296 -16 1439 205 54 0 chr2 24815294 24815635 -228440948 - MLT1A1 LTR MaLR -2 426 1 2063 114 0 0 chr2 24815972 24816244 -228440339 - AluSx SINE Alu -40 272 1 521 287 50 17 chr2 24818260 24818441 -228438142 - MIR SINE MIR -1 261 75 2431 91 0 0 chr2 24818600 24818908 -228437675 + AluSc SINE Alu 1 308 -1 1977 163 3 0 chr2 24818959 24819260 -228437323 + AluSx SINE Alu 1 302 -10 314 284 74 48 chr2 24819439 24819833 -228436750 + L1MC4a LINE L1 4672 5075 -1071 488 248 113 46 chr2 24819981 24820277 -228436306 + L1MC4a LINE L1 5292 5612 -509 * 2089 162 36 47 chr2 24820274 24820491 -228436092 + L1MA8 LINE L1 3864 4082 -2209 1396 91 106 10 chr2 24820491 24820699 -228435884 + MER30 DNA MER1_type 3 230 0 2089 162 36 47 chr2 24820699 24821414 -228435169 + L1MA8 LINE L1 4082 4803 -1488 2089 151 39 16 chr2 24821414 24821848 -228434735 + L1MA8 LINE L1 5841 6287 -4 2089 162 36 47 chr2 24821848 24821913 -228434670 + L1MA8 LINE L1 4803 4867 -1424 399 120 109 0 chr2 24821913 24822005 -228434578 + L1MA8 LINE L1 6180 6281 -10 2089 162 36 47 chr2 24822005 24822903 -228433680 + L1MA8 LINE L1 4867 6287 -4 794 187 0 24 chr2 24822886 24823052 -228433531 + L1MA9 LINE L1 5867 6028 -284 * 347 317 83 0 chr2 24823076 24823221 -228433362 + L1MC4a LINE L1 5755 5911 -1897 226 296 227 0 chr2 24823651 24823783 -228432800 - MIR SINE MIR -13 249 88 2582 62 0 0 chr2 24825195 24825499 -228431084 + AluSc SINE Alu 3 306 -3 22 35 0 0 chr2 24826162 24826191 -228430392 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 24826213 24826234 -228430349 + AT_rich Low_complexity Low_complexity 1 21 0 194 247 117 0 chr2 24826528 24826605 -228429978 + MIR3 SINE MIR 120 205 -3 2473 78 0 3 chr2 24826862 24827169 -228429414 + AluSq SINE Alu 1 306 -7 247 285 213 58 chr2 24827172 24827604 -228428979 - L2 LINE L2 -1387 1927 1429 4044 110 50 68 chr2 24827609 24828393 -228428190 - LTR1 LTR ERV1 0 785 16 1200 324 118 45 chr2 24828584 24829058 -228427525 - L2 LINE L2 -1921 1393 955 2239 112 0 3 chr2 24829058 24829362 -228427221 + AluSq SINE Alu 1 303 -10 1200 324 118 45 chr2 24829362 24830027 -228426556 - L2 LINE L2 -2359 955 171 2405 93 0 3 chr2 24830356 24830666 -228425917 + AluSg SINE Alu 1 309 -1 208 383 58 17 chr2 24830690 24830810 -228425773 + MIR SINE MIR 17 141 -67 624 240 30 43 chr2 24831176 24831409 -228425174 + L1M4 LINE L1 3781 4010 -2136 2427 88 0 0 chr2 24831436 24831742 -228424841 + AluSx SINE Alu 1 306 -6 366 354 127 23 chr2 24831961 24832221 -228424362 - L2 LINE L2 -1 3271 2985 911 201 88 38 chr2 24832312 24832422 -228424161 - MIR SINE MIR 0 262 159 1433 106 25 51 chr2 24832422 24832658 -228423925 - MER30 DNA MER1_type 0 230 1 911 201 88 38 chr2 24832658 24832786 -228423797 - MIR SINE MIR -103 159 12 269 293 61 94 chr2 24833489 24833817 -228422766 - MLT1K LTR MaLR -249 339 23 218 314 71 114 chr2 24833859 24833999 -228422584 + L2 LINE L2 3127 3260 -12 26 30 0 0 chr2 24834396 24834429 -228422154 + AT_rich Low_complexity Low_complexity 1 33 0 703 222 60 68 chr2 24834853 24835036 -228421547 + MIR SINE MIR 12 194 -68 799 143 0 30 chr2 24835036 24835169 -228421414 + FLAM_A SINE Alu 2 130 -3 703 222 60 68 chr2 24835169 24835219 -228421364 + MIR SINE MIR 194 243 -19 1704 165 3 20 chr2 24835801 24836098 -228420485 - AluJb SINE Alu -18 294 3 24 32 0 0 chr2 24836824 24836855 -228419728 + AT_rich Low_complexity Low_complexity 1 31 0 229 333 8 61 chr2 24836999 24837131 -228419452 - L2 LINE L2 -2892 422 298 1876 152 7 26 chr2 24837653 24837963 -228418620 + AluJo SINE Alu 1 304 -8 268 305 0 59 chr2 24838442 24838629 -228417954 + GA-rich Low_complexity Low_complexity 3 178 0 186 319 14 29 chr2 24840175 24840244 -228416339 + MIR SINE MIR 2 69 -193 245 269 213 9 chr2 24840638 24840746 -228415837 - L2 LINE L2 -1 3312 3183 1039 286 140 36 chr2 24840962 24841731 -228414852 - L2 LINE L2 -869 2445 1597 382 286 81 0 chr2 24841737 24841898 -228414685 - L1ME3 LINE L1 0 6162 5989 1590 170 10 21 chr2 24842533 24842822 -228413761 + AluJo SINE Alu 1 286 -26 195 129 0 0 chr2 24842902 24842933 -228413650 + (TATG)n Simple_repeat Simple_repeat 4 34 0 2453 52 3 0 chr2 24842991 24843301 -228413282 - L1PA7 LINE L1 -1 6153 5843 1752 177 0 25 chr2 24843424 24843740 -228412843 - AluJb SINE Alu -3 309 2 226 320 77 64 chr2 24844306 24844540 -228412043 - MIR SINE MIR -24 238 2 226 359 78 7 chr2 24844540 24844677 -228411906 - L2 LINE L2 -314 2958 2812 1258 227 44 3 chr2 24844807 24845195 -228411388 + L1ME1 LINE L1 4163 4566 -1580 689 231 0 0 chr2 24845297 24845431 -228411152 + AluJo SINE Alu 1 134 -178 1398 218 35 33 chr2 24845500 24845656 -228410927 + L1ME1 LINE L1 4680 4834 -1312 273 29 0 0 chr2 24845656 24845690 -228410893 + (TG)n Simple_repeat Simple_repeat 2 35 0 1398 218 35 33 chr2 24845690 24845956 -228410627 + L1ME1 LINE L1 4834 5103 -1043 2300 101 13 0 chr2 24845971 24846278 -228410305 - AluSp SINE Alu -2 311 1 487 196 34 27 chr2 24846282 24846430 -228410153 + L1MB8 LINE L1 6030 6178 0 * 1779 197 70 40 chr2 24846425 24846943 -228409640 + L1ME1 LINE L1 5590 6122 -44 490 194 76 0 chr2 24846844 24846988 -228409595 + L1MA10 LINE L1 6180 6334 0 * 414 355 125 5 chr2 24847455 24847863 -228408720 - L2 LINE L2 -812 2502 2046 793 242 112 40 chr2 24848009 24848464 -228408119 + HAL1 LINE L1 2020 2507 0 2306 88 14 0 chr2 24849465 24849762 -228406821 - AluSx SINE Alu -11 301 1 1743 187 7 3 chr2 24850168 24850452 -228406131 + AluJo SINE Alu 3 287 -25 201 389 74 25 chr2 24850583 24850827 -228405756 - L2 LINE L2 -189 3083 2828 946 294 94 55 chr2 24850881 24851548 -228405035 - L2 LINE L2 -557 2757 2065 190 331 120 14 chr2 24851565 24851707 -228404876 - L2 LINE L2 -1411 1903 1747 225 261 15 0 chr2 24851820 24851885 -228404698 + GA-rich Low_complexity Low_complexity 5 70 0 2159 138 0 0 chr2 24852631 24852935 -228403648 + AluJb SINE Alu 1 304 -8 1862 152 3 10 chr2 24853056 24853353 -228403230 - AluJb SINE Alu -17 295 1 277 259 30 74 chr2 24853580 24853715 -228402868 + L2 LINE L2 3184 3312 -1 315 374 116 0 chr2 24853942 24854089 -228402494 + MIR3 SINE MIR 38 201 -7 180 0 0 0 chr2 24854142 24854162 -228402421 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 2205 94 0 14 chr2 24854162 24854313 -228402270 - AluSx SINE Alu -28 284 137 2342 75 0 10 chr2 24854313 24854607 -228401976 - AluSp SINE Alu -9 304 14 2205 94 0 14 chr2 24854607 24854743 -228401840 - AluSx SINE Alu -175 137 1 2129 135 3 0 chr2 24854744 24855041 -228401542 - AluSx SINE Alu -14 298 1 431 305 85 10 chr2 24855283 24855483 -228401100 - L3 LINE CR1 -117 1460 1246 25 51 0 0 chr2 24855526 24855565 -228401018 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr2 24855732 24855757 -228400826 + AT_rich Low_complexity Low_complexity 1 25 0 249 83 0 0 chr2 24855916 24855952 -228400631 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 207 367 235 14 chr2 24856645 24857007 -228399576 - L2 LINE L2 -15 3257 2816 331 206 16 0 chr2 24857305 24857368 -228399215 - L2 LINE L2 -2 3311 3248 182 262 0 0 chr2 24857541 24857583 -228399000 + MIR SINE MIR 98 139 -123 783 153 74 45 chr2 24858468 24858710 -228397873 - Charlie1a DNA MER1_type 0 1455 1207 1014 195 0 3 chr2 24858720 24859058 -228397525 + (TA)n Simple_repeat Simple_repeat 1 338 0 1973 125 56 0 chr2 24859058 24859345 -228397238 - AluSq SINE Alu -10 303 1 977 70 0 0 chr2 24859345 24859460 -228397123 - AluSq/x SINE Alu -177 135 21 4896 197 61 7 chr2 24859460 24860595 -228395988 - Charlie1a DNA MER1_type -259 1196 1 981 225 41 0 chr2 24860601 24860819 -228395764 + MIR SINE MIR 34 260 -2 21 0 0 0 chr2 24861036 24861057 -228395526 + AT_rich Low_complexity Low_complexity 1 21 0 315 254 155 35 chr2 24861787 24861929 -228394654 - L1ME4a LINE L1 -7 6114 5956 1965 223 80 17 chr2 24862865 24863381 -228393202 - MER77 LTR ERV1 -4 601 54 34 0 0 0 chr2 24863954 24863988 -228392595 + AT_rich Low_complexity Low_complexity 1 34 0 1890 162 3 7 chr2 24864608 24864910 -228391673 + AluJb SINE Alu 1 301 -11 21 0 0 0 chr2 24865027 24865048 -228391535 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 24865317 24865347 -228391236 + AT_rich Low_complexity Low_complexity 1 30 0 860 211 57 0 chr2 24866387 24866581 -228390002 + MER3 DNA MER1_type 1 205 -4 1121 189 205 8 chr2 24866645 24866894 -228389689 + AluJo SINE Alu 1 298 -4 256 291 131 78 chr2 24867048 24867316 -228389267 - L2 LINE L2 0 3272 2991 28 91 0 0 chr2 24870981 24871058 -228385525 + AT_rich Low_complexity Low_complexity 1 77 0 266 335 79 93 chr2 24872037 24872327 -228384256 - L2 LINE L2 -4 3268 2983 572 276 90 0 chr2 24872475 24872631 -228383952 - MER5B DNA MER1_type 0 178 9 200 304 265 16 chr2 24872603 24872856 -228383727 - L2 LINE L2 -715 2599 2284 * 382 285 131 8 chr2 24873190 24873320 -228383263 - MIR SINE MIR -110 152 7 1800 136 7 23 chr2 24873402 24873530 -228383053 + AluJb SINE Alu 11 140 -172 198 0 0 0 chr2 24873530 24873552 -228383031 + (TAGA)n Simple_repeat Simple_repeat 2 23 0 1800 136 7 23 chr2 24873552 24873724 -228382859 + AluJb SINE Alu 140 306 -6 3969 153 60 13 chr2 24873880 24874714 -228381869 - L1MB7 LINE L1 -9 6175 5299 6371 158 26 18 chr2 24874724 24876419 -228380164 - L1MC1 LINE L1 0 6333 4633 269 290 169 8 chr2 24876587 24876711 -228379872 + MIR SINE MIR 98 241 -21 295 290 48 0 chr2 24876781 24876843 -228379740 - MIR SINE MIR -184 78 14 2642 259 100 36 chr2 24879039 24879595 -228376988 - L2 LINE L2 -7 3306 2787 2379 101 0 0 chr2 24879595 24879902 -228376681 - AluSq SINE Alu -6 307 1 2642 259 100 36 chr2 24879902 24880631 -228375952 - L2 LINE L2 -526 2787 1939 2037 142 0 13 chr2 24880782 24881085 -228375498 - AluSx SINE Alu -13 299 1 367 254 144 77 chr2 24881097 24881650 -228374933 - L1MCa LINE L1 -3454 2972 2337 312 282 9 0 chr2 24882021 24882131 -228374452 - L1MCa LINE L1 -4577 1849 1739 715 250 76 94 chr2 24882307 24882501 -228374082 - L1MCa LINE L1 -4887 1529 1333 1885 93 12 4 chr2 24882501 24882749 -228373834 - AluSq SINE Alu -63 250 1 715 250 76 94 chr2 24882749 24883242 -228373341 - L1MCa LINE L1 -5083 1333 855 1560 115 0 0 chr2 24883246 24883454 -228373129 - AluSg/x SINE Alu -4 306 99 590 113 0 0 chr2 24883799 24883879 -228372704 - AluS SINE Alu -233 80 1 304 282 17 86 chr2 24884008 24884182 -228372401 - LTR33 LTR ERVL -344 177 16 277 303 76 0 chr2 24884567 24884712 -228371871 + MER103 DNA DNA 3 158 -8 181 320 184 38 chr2 24884887 24885447 -228371136 - L2 LINE L2 -1347 1967 1326 2231 85 14 0 chr2 24885458 24885751 -228370832 + AluSx SINE Alu 1 297 -15 356 221 71 0 chr2 24886073 24886186 -228370397 - MER113 DNA MER1_type? -400 121 1 398 145 8 46 chr2 24886474 24886605 -228369978 + CT-rich Low_complexity Low_complexity 3 128 0 222 37 0 0 chr2 24886611 24886638 -228369945 + (TCCCC)n Simple_repeat Simple_repeat 5 31 0 1729 150 10 27 chr2 24886678 24886971 -228369612 - AluJo SINE Alu -4 308 21 2421 142 29 44 chr2 24887345 24887415 -228369168 - MER65A LTR ERV1 0 445 375 2365 94 3 3 chr2 24887415 24887724 -228368859 + AluSx SINE Alu 3 311 -1 2421 142 29 44 chr2 24887724 24888104 -228368479 - MER65A LTR ERV1 -70 375 2 2418 79 0 19 chr2 24888107 24888423 -228368160 - AluY SINE Alu -1 310 1 396 174 229 60 chr2 24888775 24888976 -228367607 + MER112 DNA MER1_type 10 244 -16 219 352 48 9 chr2 24890364 24890469 -228366114 + L2 LINE L2 3122 3230 -42 299 304 79 1 chr2 24891606 24891735 -228364848 + MIR SINE MIR 31 166 -65 1216 93 0 0 chr2 24893126 24893288 -228363295 - AluY SINE Alu -17 294 133 2322 68 3 0 chr2 24893288 24893584 -228362999 - AluY SINE Alu -14 297 1 1992 127 7 10 chr2 24893606 24893914 -228362669 - AluJo SINE Alu -5 307 1 2246 106 0 0 chr2 24894702 24895003 -228361580 - AluSx SINE Alu -11 301 1 303 244 54 95 chr2 24895506 24895674 -228360909 + L1MEd LINE L1 750 910 -5209 230 304 98 66 chr2 24895816 24896254 -228360329 + L1M4 LINE L1 3365 3816 -2330 460 246 32 24 chr2 24896273 24896399 -228360184 + MIR SINE MIR 34 160 -102 26 0 0 0 chr2 24897463 24897489 -228359094 + AT_rich Low_complexity Low_complexity 1 26 0 667 237 89 8 chr2 24898497 24898785 -228357798 - MER46C DNA MER2_type 0 338 4 236 304 38 13 chr2 24899274 24899353 -228357230 + L2 LINE L2 3152 3232 -40 1932 117 0 13 chr2 24899743 24900043 -228356540 - AluSx SINE Alu 0 312 17 568 279 131 27 chr2 24904390 24904612 -228351971 + MIR SINE MIR 18 262 0 286 269 117 80 chr2 24904650 24904974 -228351609 - L2 LINE L2 -33 3239 2904 1889 113 0 0 chr2 24905236 24905501 -228351082 - AluSx SINE Alu -25 287 23 410 286 113 0 chr2 24907675 24907808 -228348775 + MIR3 SINE MIR 20 167 -41 2383 85 0 0 chr2 24907938 24908245 -228348338 - AluSx SINE Alu -5 307 1 186 296 0 0 chr2 24909483 24909527 -228347056 + L2 LINE L2 3210 3253 -19 500 262 84 69 chr2 24910060 24910465 -228346118 + MLT1J1 LTR MaLR 5 415 -31 1374 152 18 72 chr2 24910520 24910888 -228345695 + L1MA9 LINE L1 5131 5496 -743 1556 150 62 126 chr2 24911006 24911305 -228345278 + LTR10A LTR ERV1 185 447 -162 2229 78 3 0 chr2 24911305 24911588 -228344995 + AluY SINE Alu 1 284 -27 1556 150 62 126 chr2 24911588 24911742 -228344841 + LTR10A LTR ERV1 447 609 0 37094 33 3 1 chr2 24911747 24916962 -228339621 + L1PA4 LINE L1 926 6152 -3 2719 153 23 50 chr2 24916982 24917389 -228339194 + L1MA9 LINE L1 5524 5914 -398 4015 91 16 4 chr2 24917389 24917936 -228338647 + MER41A LTR ERV1 1 554 0 2719 153 23 50 chr2 24917936 24918084 -228338499 + L1MA9 LINE L1 5914 6064 -248 3379 113 87 4 chr2 24918104 24918644 -228337939 + MER51C LTR ERV1 45 629 -11 1033 204 33 0 chr2 24918653 24918864 -228337719 + L1MA9 LINE L1 6050 6267 -45 357 261 148 0 chr2 24920767 24920882 -228335701 - L2 LINE L2 0 3313 3182 409 262 182 14 chr2 24921080 24921294 -228335289 - L2 LINE L2 -471 2843 2594 1014 110 86 0 chr2 24921974 24922137 -228334446 + L1PA10 LINE L1 5991 6167 -1 706 240 142 20 chr2 24922138 24922686 -228333897 + L1ME3 LINE L1 1306 1895 -4645 2157 153 65 28 chr2 24922686 24923116 -228333467 + L1MC1 LINE L1 5888 6333 0 706 240 142 20 chr2 24923116 24923151 -228333432 + L1ME3 LINE L1 1895 1924 -4616 234 290 84 47 chr2 24923204 24923418 -228333165 + L1MC5 LINE L1 7706 7927 -34 907 263 103 23 chr2 24923419 24923449 -228333134 + L1ME3 LINE L1 4230 4256 -2284 1837 137 11 11 chr2 24923449 24923757 -228332826 + AluSx SINE Alu 1 308 0 907 263 103 23 chr2 24923757 24924088 -228332495 + L1ME3 LINE L1 4256 4657 -1883 1958 92 96 0 chr2 24924088 24924360 -228332223 + AluSx SINE Alu 1 298 -14 907 263 103 23 chr2 24924360 24924566 -228332017 + L1ME3 LINE L1 4657 4845 -1695 609 188 194 7 chr2 24924570 24924714 -228331869 - MER20 DNA MER1_type -4 215 45 804 122 3 16 chr2 24924737 24924880 -228331703 + L1ME3 LINE L1 4860 5003 -1537 315 47 0 0 chr2 24924883 24924926 -228331657 + MADE1 DNA Mariner 1 43 -37 356 292 44 13 chr2 24925036 24925262 -228331321 + L1ME3 LINE L1 5196 5428 -1112 2237 91 0 7 chr2 24925265 24925561 -228331022 + AluSc SINE Alu 1 294 -15 385 113 0 0 chr2 24925643 24925718 -228330865 + AluS SINE Alu 231 305 0 581 216 41 26 chr2 24925754 24925948 -228330635 + L1ME3 LINE L1 6103 6299 -265 2200 101 7 0 chr2 24925993 24926290 -228330293 - AluSx SINE Alu -13 299 1 236 250 26 0 chr2 24926321 24926397 -228330186 + L1ME3 LINE L1 6273 6350 -206 1036 149 14 59 chr2 24927170 24927391 -228329192 + L1PA16 LINE L1 5955 6165 -1 2013 125 0 13 chr2 24928702 24929005 -228327578 + AluSp SINE Alu 1 299 -14 820 348 165 11 chr2 24929155 24929814 -228326769 - L3 LINE CR1 -1 1576 816 1549 169 18 0 chr2 24929943 24930215 -228326368 - AluJb SINE Alu -35 277 1 548 255 149 70 chr2 24930505 24930869 -228325714 + MLT1L LTR MaLR 110 564 -50 1599 141 4 36 chr2 24931794 24932070 -228324513 - AluJo SINE Alu -10 302 36 1933 146 7 0 chr2 24932929 24933230 -228323353 - AluSx SINE Alu -9 303 1 812 180 7 0 chr2 24933874 24934024 -228322559 + FRAM SINE Alu 1 151 -25 262 225 54 54 chr2 24935759 24935888 -228320695 + L1MC5 LINE L1 7546 7674 -287 * 347 123 18 0 chr2 24935881 24935938 -228320645 - L1MD1 LINE L1 -122 6120 6063 1404 217 68 25 chr2 24935983 24936623 -228319960 - L1MDa LINE L1 -4952 1588 857 188 331 38 68 chr2 24936681 24936814 -228319769 + L2 LINE L2 3142 3270 -2 366 252 165 9 chr2 24937197 24937312 -228319271 + L2 LINE L2 3138 3270 -2 1647 174 17 0 chr2 24937553 24937846 -228318737 + AluJb SINE Alu 1 298 -14 1921 122 0 13 chr2 24938361 24938664 -228317919 - AluSx SINE Alu -13 299 1 458 275 0 47 chr2 24939177 24939348 -228317235 + L1MC5 LINE L1 7747 7909 -52 2115 118 3 10 chr2 24939382 24939696 -228316887 + AluJb SINE Alu 1 312 0 1667 125 0 0 chr2 24940247 24940479 -228316104 - AluSx SINE Alu -17 295 64 480 34 0 0 chr2 24940493 24940552 -228316031 + AluJ/FLAM SINE Alu 42 100 -212 343 111 0 19 chr2 24940552 24940606 -228315977 - Alu SINE Alu -246 53 1 2166 266 138 11 chr2 24941390 24942288 -228314295 + L2 LINE L2 1325 2336 -978 919 318 42 19 chr2 24943394 24943869 -228312714 + L2 LINE L2 2813 3298 -15 255 161 0 0 chr2 24944276 24944332 -228312251 + (TA)n Simple_repeat Simple_repeat 1 56 0 2209 108 3 3 chr2 24944332 24944628 -228311955 - AluSp SINE Alu -17 296 1 21 0 0 0 chr2 24946247 24946268 -228310315 + AT_rich Low_complexity Low_complexity 1 21 0 3708 168 25 3 chr2 24947296 24947932 -228308651 - L1MB7 LINE L1 -10 6174 5525 2360 106 0 0 chr2 24948267 24948570 -228308013 - AluSx SINE Alu -9 303 1 1793 160 13 19 chr2 24948909 24949222 -228307361 - AluJb SINE Alu 0 312 2 431 304 77 44 chr2 24949801 24950097 -228306486 + HAL1 LINE L1 1088 1409 -1098 1937 168 0 9 chr2 24950097 24950412 -228306171 + AluJb SINE Alu 1 312 0 431 304 77 44 chr2 24950412 24950619 -228305964 + HAL1 LINE L1 1409 1608 -899 27 0 0 0 chr2 24950840 24950867 -228305716 + AT_rich Low_complexity Low_complexity 1 27 0 1906 218 62 24 chr2 24951118 24951568 -228305015 + MLT1C LTR MaLR 1 467 0 705 226 28 50 chr2 24952515 24952635 -228303948 - MER5B DNA MER1_type -1 177 61 2301 105 0 0 chr2 24952635 24952931 -228303652 - AluSx SINE Alu -16 296 1 705 226 28 50 chr2 24952931 24952991 -228303592 - MER5B DNA MER1_type -117 61 1 206 254 0 17 chr2 24953025 24953084 -228303499 + MIR SINE MIR 150 207 -55 1874 228 45 14 chr2 24953096 24953601 -228302982 + L1M4 LINE L1 2684 3204 -2942 183 160 60 60 chr2 24953624 24953674 -228302909 + MIR SINE MIR 212 261 -1 2181 111 0 3 chr2 24953738 24954036 -228302547 - AluSq SINE Alu -16 297 1 2412 81 3 0 chr2 24954547 24954854 -228301729 + AluSq SINE Alu 1 308 -5 252 0 0 0 chr2 24954854 24954882 -228301701 + (TA)n Simple_repeat Simple_repeat 2 29 0 946 141 65 109 chr2 24955494 24955742 -228300841 + L1MCc LINE L1 13 249 -6174 1230 208 0 25 chr2 24955774 24956058 -228300525 + L1M4 LINE L1 5113 5389 -757 18186 124 58 91 chr2 24956092 24958220 -228298363 + L1M1 LINE L1 16 2214 -5351 2352 107 0 0 chr2 24958220 24958528 -228298055 + AluSx SINE Alu 3 310 -2 1137 130 0 6 chr2 24958528 24958697 -228297886 + AluSg/x SINE Alu 126 293 -19 585 62 0 82 chr2 24958697 24958794 -228297789 + MER30 DNA MER1_type 52 140 -90 2244 107 0 16 chr2 24958795 24959112 -228297471 + AluSx SINE Alu 1 312 0 18186 124 58 91 chr2 24959112 24959662 -228296921 + L1M1 LINE L1 2212 2779 -4786 2073 148 7 0 chr2 24959662 24959972 -228296611 + AluSx SINE Alu 1 312 0 18186 124 58 91 chr2 24959972 24960552 -228296031 + L1M1 LINE L1 2779 3425 -4140 332 167 17 17 chr2 24960578 24960638 -228295945 - LTR45 LTR ERV1 -25 500 441 6252 108 9 8 chr2 24960638 24960654 -228295929 + L1MA2 LINE L1 5420 5434 -870 2008 123 74 0 chr2 24960654 24960938 -228295645 + AluSx SINE Alu 1 305 -7 6252 108 9 8 chr2 24960938 24961804 -228294779 + L1MA2 LINE L1 5434 6303 -1 3045 225 51 46 chr2 24961844 24963156 -228293427 + L1MCc LINE L1 734 2068 -4873 237 88 0 0 chr2 24963166 24963200 -228293383 + Alu SINE Alu 264 297 -5 22 0 0 0 chr2 24963779 24963801 -228292782 + AT_rich Low_complexity Low_complexity 1 22 0 2186 78 58 3 chr2 24964398 24964692 -228291891 + AluY SINE Alu 1 310 -1 4151 188 198 0 chr2 24964761 24965743 -228290840 - L1M2 LINE L1 -5109 1740 565 1158 131 16 6 chr2 24965777 24965960 -228290623 - L1M2 LINE L1 -6659 190 6 1521 141 65 4 chr2 24965963 24966225 -228290358 - AluJo SINE Alu -32 280 3 942 122 95 0 chr2 24966373 24966521 -228290062 - AluSc SINE Alu -14 295 134 5460 146 66 32 chr2 24966555 24966893 -228289690 - Charlie1 DNA MER1_type -62 2699 2374 2345 75 26 7 chr2 24966893 24967014 -228289569 + AluY SINE Alu 1 118 -193 207 0 0 0 chr2 24967014 24967037 -228289546 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2345 75 26 7 chr2 24967037 24967220 -228289363 + AluY SINE Alu 118 311 0 5460 146 66 32 chr2 24967220 24967946 -228288637 - Charlie1 DNA MER1_type -387 2374 1599 2339 61 10 14 chr2 24968709 24968843 -228287740 + AluSg SINE Alu 1 134 -176 2404 80 0 3 chr2 24968843 24969145 -228287438 + AluY SINE Alu 1 301 -10 2339 61 10 14 chr2 24969145 24969303 -228287280 + AluSg SINE Alu 134 292 -18 2262 101 0 20 chr2 24969401 24969707 -228286876 - AluSx SINE Alu -12 300 1 973 141 52 5 chr2 24969719 24969910 -228286673 + L1MA8 LINE L1 6056 6255 -36 2233 116 0 0 chr2 24969910 24970213 -228286370 + AluSx SINE Alu 1 303 -9 224 219 172 0 chr2 24970225 24970289 -228286294 + MIR SINE MIR 64 138 -124 266 242 65 59 chr2 24970497 24970683 -228285900 + L1ME4a LINE L1 5923 6109 -12 2012 112 36 0 chr2 24971426 24971702 -228284881 - AluSx SINE Alu -15 297 12 1993 113 15 0 chr2 24971878 24972152 -228284431 + AluSx SINE Alu 26 303 -9 866 267 52 14 chr2 24972184 24972472 -228284111 + L1MC4a LINE L1 5597 5895 -1913 1475 186 21 48 chr2 24972700 24972845 -228283738 + AluJo SINE Alu 1 136 -176 2209 105 3 13 chr2 24972845 24973149 -228283434 + AluSx SINE Alu 1 301 -11 1475 186 21 48 chr2 24973149 24973293 -228283290 + AluJo SINE Alu 136 282 -30 1111 166 11 0 chr2 24973760 24973935 -228282648 - MSTD LTR MaLR -1 395 219 366 271 236 13 chr2 24973940 24974046 -228282537 - MLT1K LTR MaLR -53 535 454 231 36 0 0 chr2 24974046 24974074 -228282509 + (TC)n Simple_repeat Simple_repeat 1 28 0 366 271 236 13 chr2 24974074 24974196 -228282387 - MLT1K LTR MaLR -134 454 256 252 250 0 31 chr2 24975137 24975201 -228281382 + MLT1L LTR MaLR 3 64 -551 243 273 176 66 chr2 24975257 24975484 -228281099 + MLT1L LTR MaLR 149 400 -215 238 304 20 10 chr2 24975527 24975629 -228280954 + MLT1L LTR MaLR 513 615 0 611 95 9 2 chr2 24975680 24975902 -228280681 + AluSx SINE Alu 1 268 -44 273 374 80 13 chr2 24976178 24976416 -228280167 + L3 LINE CR1 1319 1572 -5 2062 107 0 52 chr2 24976496 24976824 -228279759 - AluSx SINE Alu -1 311 1 288 172 0 17 chr2 24976950 24977008 -228279575 + MLT1L LTR MaLR 550 606 -9 1458 113 13 26 chr2 24977154 24977383 -228279200 + MER1B DNA MER1_type 110 335 -4 2451 70 0 22 chr2 24977383 24977698 -228278885 + AluY SINE Alu 1 308 -3 1536 152 33 63 chr2 24977988 24978291 -228278292 + AluJo SINE Alu 1 294 -18 1044 105 0 0 chr2 24978357 24978490 -228278093 + AluSq/x SINE Alu 1 133 -180 2133 103 20 3 chr2 24978492 24978792 -228277791 + AluSg SINE Alu 1 305 -5 190 278 56 0 chr2 24978794 24978848 -228277735 - MER5A DNA MER1_type -53 136 80 2125 110 0 10 chr2 24979130 24979422 -228277161 + AluY SINE Alu 1 289 -22 404 274 185 45 chr2 24980699 24981078 -228275505 + L2 LINE L2 2027 2458 -856 484 235 119 68 chr2 24981089 24981518 -228275065 + L1ME4a LINE L1 5660 6110 -11 36 53 0 0 chr2 24983128 24983185 -228273398 + AT_rich Low_complexity Low_complexity 1 57 0 2289 86 3 17 chr2 24983673 24983975 -228272608 + AluSp SINE Alu 1 298 -15 1954 92 0 95 chr2 24984642 24984967 -228271616 - AluSq SINE Alu -19 294 1 1086 209 29 5 chr2 24985439 24985649 -228270934 - MER20 DNA MER1_type -4 215 1 416 281 155 28 chr2 24985656 24986016 -228270567 - L1MC/D LINE L1 -552 5569 5290 211 300 0 14 chr2 24986118 24986188 -228270395 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 842 287 24 31 chr2 24986737 24986774 -228269809 + Charlie1a DNA MER1_type 6 42 -2719 2045 148 64 29 chr2 24986774 24987151 -228269432 - MLT1B LTR MaLR 0 390 1 842 287 24 31 chr2 24987151 24987367 -228269216 + Charlie1a DNA MER1_type 42 257 -1198 258 356 54 64 chr2 24987768 24988063 -228268520 + L2 LINE L2 2685 2976 -338 759 189 0 8 chr2 24988119 24988241 -228268342 + FLAM_C SINE Alu 1 121 -12 320 260 106 57 chr2 24988530 24988653 -228267930 + L2 LINE L2 3143 3271 -1 446 316 51 6 chr2 24988784 24988942 -228267641 - MIR3 SINE MIR -9 199 35 1262 159 71 128 chr2 24989528 24990101 -228266482 - L1MA9 LINE L1 -25 6266 5787 327 65 0 0 chr2 24990101 24990147 -228266436 + (TG)n Simple_repeat Simple_repeat 2 47 0 1262 159 71 128 chr2 24990147 24990250 -228266333 - L1MA9 LINE L1 -504 5787 5680 1969 134 7 10 chr2 24990250 24990548 -228266035 - L1PB3 LINE L1 -1 6153 5857 22069 64 5 8 chr2 24990553 24995929 -228260654 + L1PA6 LINE L1 803 6153 -1 2156 186 37 14 chr2 24995932 24996363 -228260220 - L1MA8 LINE L1 -423 5868 5428 1259 238 3 33 chr2 24997746 24998049 -228258534 + AluJo SINE Alu 1 294 -8 406 280 84 76 chr2 24998050 24998198 -228258385 + L3 LINE CR1 543 695 -882 2179 103 3 0 chr2 24998198 24998498 -228258085 + AluY SINE Alu 1 301 -10 406 280 84 76 chr2 24998498 24998624 -228257959 + L3 LINE CR1 695 819 -758 4509 190 38 20 chr2 24998707 24998735 -228257848 + L1MA9 LINE L1 4928 4954 -1358 1998 154 0 3 chr2 24998735 24999041 -228257542 + AluJb SINE Alu 1 305 -7 4509 190 38 20 chr2 24999041 25000290 -228256293 + L1MA9 LINE L1 4954 6228 -84 988 166 60 10 chr2 25000290 25000489 -228256094 + MER2 DNA MER2_type 2 210 -135 292 109 0 0 chr2 25000597 25000643 -228255940 + L1MA9 LINE L1 6228 6273 -39 320 130 0 19 chr2 25000656 25000710 -228255873 - Alu SINE Alu -8 294 242 21 0 0 0 chr2 25000725 25000746 -228255837 + AT_rich Low_complexity Low_complexity 1 21 0 588 310 64 86 chr2 25001157 25001535 -228255048 + L3 LINE CR1 1028 1396 -181 1987 124 10 7 chr2 25001535 25001834 -228254749 + AluSx SINE Alu 1 300 -12 588 310 64 86 chr2 25001834 25001910 -228254673 + L3 LINE CR1 1396 1472 -105 2168 107 0 7 chr2 25002473 25002764 -228253819 + AluSq SINE Alu 1 289 -24 1574 175 29 16 chr2 25002792 25003088 -228253495 + AluJb SINE Alu 1 303 -9 180 77 0 0 chr2 25003088 25003114 -228253469 + (TAAG)n Simple_repeat Simple_repeat 2 27 0 1574 175 29 16 chr2 25003114 25003125 -228253458 + AluJb SINE Alu 303 312 0 2415 81 0 0 chr2 25003429 25003737 -228252846 - AluSc SINE Alu -1 308 1 2546 65 0 0 chr2 25003748 25004058 -228252525 - AluY SINE Alu -1 310 1 265 282 99 30 chr2 25004903 25005034 -228251549 + L2 LINE L2 3172 3311 -2 678 256 143 74 chr2 25005236 25005446 -228251137 - L2 LINE L2 -1 3312 3118 4222 165 52 8 chr2 25005446 25006270 -228250313 + L1MA9 LINE L1 5449 6308 -4 678 256 143 74 chr2 25006270 25006564 -228250019 - L2 LINE L2 -195 3118 2771 2777 248 43 26 chr2 25006613 25007559 -228249024 - L1ME1 LINE L1 -9 6157 5194 1168 165 25 53 chr2 25007602 25007845 -228248738 - AluJo SINE Alu -76 236 1 997 178 160 17 chr2 25007853 25008204 -228248379 - L1MB8 LINE L1 -1 6177 5765 * 4006 236 34 20 chr2 25008197 25009318 -228247265 - L1MB8 LINE L1 -1294 4852 3716 1574 170 0 18 chr2 25010438 25010715 -228245868 + AluJo SINE Alu 11 282 -30 21 0 0 0 chr2 25010715 25010736 -228245847 + GC_rich Low_complexity Low_complexity 1 21 0 539 283 128 54 chr2 25011340 25011907 -228244676 - L1ME3A LINE L1 -233 5937 5321 * 851 269 97 11 chr2 25011884 25012245 -228244338 - HAL1 LINE L1 -1119 1388 997 379 178 20 20 chr2 25012271 25012372 -228244211 + (TATATG)n Simple_repeat Simple_repeat 3 103 0 478 301 118 16 chr2 25012396 25012582 -228244001 - HAL1 LINE L1 -1575 932 728 630 189 52 13 chr2 25012602 25012755 -228243828 - L1MC4a LINE L1 -1314 6494 6336 * 1420 292 92 39 chr2 25012746 25013411 -228243172 - HAL1 LINE L1 -1804 703 4 225 91 0 0 chr2 25013892 25013925 -228242658 - L1MC4a LINE L1 -1415 6393 6361 403 253 112 28 chr2 25014921 25015099 -228241484 + L1ME3A LINE L1 5649 5841 -329 510 228 239 30 chr2 25015138 25015300 -228241283 + MIR SINE MIR 1 128 -134 2335 65 0 7 chr2 25015300 25015593 -228240990 + AluY SINE Alu 1 291 -20 315 71 0 0 chr2 25015593 25015635 -228240948 + (TA)n Simple_repeat Simple_repeat 2 43 0 510 228 239 30 chr2 25015635 25015668 -228240915 + MIR SINE MIR 127 238 -24 221 370 37 22 chr2 25015697 25015832 -228240751 - L3 LINE CR1 -266 1311 1175 293 359 14 75 chr2 25016570 25016918 -228239665 + L2 LINE L2 2848 3174 -98 2369 90 0 0 chr2 25017126 25017427 -228239156 - AluSq SINE Alu -12 301 1 189 0 0 0 chr2 25018301 25018322 -228238261 + (A)n Simple_repeat Simple_repeat 1 21 0 363 191 217 35 chr2 25018449 25018564 -228238019 - L2 LINE L2 -3 3310 3175 430 99 81 36 chr2 25019222 25019333 -228237250 + L1PA2 LINE L1 6034 6149 -6 716 147 18 43 chr2 25019333 25019488 -228237095 + L1MA5A LINE L1 6135 6293 -4 1641 209 86 87 chr2 25019488 25020243 -228236340 + L1M4 LINE L1 3830 4583 -1563 27 0 0 0 chr2 25020916 25020943 -228235640 + AT_rich Low_complexity Low_complexity 1 27 0 290 320 26 13 chr2 25021636 25021789 -228234794 - Charlie4 DNA MER1_type -1384 577 423 840 227 89 0 chr2 25022103 25022306 -228234277 + MER58A DNA MER1_type 4 224 0 2593 51 0 3 chr2 25022536 25022847 -228233736 - AluY SINE Alu -1 310 1 341 333 83 11 chr2 25022983 25023163 -228233420 + L2 LINE L2 2168 2360 -954 * 404 336 148 38 chr2 25023160 25023553 -228233030 + L2 LINE L2 2837 3272 0 2141 114 3 0 chr2 25023646 25023943 -228232640 + AluSx SINE Alu 1 298 -14 192 219 83 115 chr2 25024004 25024100 -228232483 - MIR SINE MIR -100 108 16 973 101 0 34 chr2 25024115 25024264 -228232319 + L1MC1 LINE L1 6016 6159 -174 359 162 27 0 chr2 25024373 25024447 -228232136 + L1MC1 LINE L1 6258 6333 0 248 91 23 0 chr2 25024464 25024508 -228232075 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1812 152 34 7 chr2 25024713 25025009 -228231574 - AluJo SINE Alu -3 309 6 2402 92 3 0 chr2 25025211 25025517 -228231066 + AluSp SINE Alu 2 308 -5 2160 105 7 20 chr2 25025715 25026021 -228230562 + AluSq SINE Alu 1 302 -11 3560 205 43 47 chr2 25026501 25027556 -228229027 + L1ME1 LINE L1 40 1181 -5215 1170 184 101 14 chr2 25027570 25027848 -228228735 + L1ME1 LINE L1 4632 4933 -1282 986 201 43 39 chr2 25027879 25028158 -228228425 + L1ME1 LINE L1 5877 6156 -79 468 216 36 22 chr2 25028164 25028303 -228228280 + L1MB8 LINE L1 6036 6176 -2 1335 168 84 14 chr2 25028369 25028655 -228227928 - AluSx SINE Alu -6 306 1 5415 88 36 50 chr2 25028655 25029505 -228227078 - L1MA5A LINE L1 -170 6127 5288 195 42 0 0 chr2 25029505 25029529 -228227054 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5415 88 36 50 chr2 25029529 25029564 -228227019 - L1MA5A LINE L1 -1009 5288 5254 1045 252 156 15 chr2 25029577 25030193 -228226390 - L1ME LINE L1 -2297 3783 3081 2267 101 0 3 chr2 25030266 25030563 -228226020 + AluSg SINE Alu 1 296 -14 498 75 0 0 chr2 25030564 25030631 -228225952 + (TA)n Simple_repeat Simple_repeat 2 68 0 1418 253 48 23 chr2 25030657 25031183 -228225400 - L1ME LINE L1 -3169 2911 2373 653 168 80 0 chr2 25031185 25031310 -228225273 + AluJo SINE Alu 1 135 -177 2021 259 82 69 chr2 25031312 25032667 -228223916 - L1ME LINE L1 -3699 2381 1044 414 100 0 0 chr2 25032667 25032727 -228223856 + (TG)n Simple_repeat Simple_repeat 2 61 0 2021 259 82 69 chr2 25032727 25032965 -228223618 - L1ME LINE L1 -5036 1044 810 225 65 0 0 chr2 25032965 25032996 -228223587 + (TA)n Simple_repeat Simple_repeat 2 32 0 2021 259 82 69 chr2 25032996 25033247 -228223336 - L1ME LINE L1 -5270 810 520 2316 204 79 18 chr2 25033247 25033805 -228222778 + L1MD2 LINE L1 5600 6191 -168 784 290 27 53 chr2 25033812 25034150 -228222433 - L1ME LINE L1 -5735 335 7 298 283 33 0 chr2 25035074 25035226 -228221357 + (TA)n Simple_repeat Simple_repeat 2 158 0 401 255 59 39 chr2 25035432 25035585 -228220998 - L1ME3A LINE L1 -6 6164 6009 2272 65 3 59 chr2 25035867 25036189 -228220394 + AluY SINE Alu 1 304 -7 886 152 236 0 chr2 25036261 25036452 -228220131 - MER46A DNA MER2_type 0 236 1 353 241 19 134 chr2 25036787 25037025 -228219558 - L1MC5 LINE L1 -11 8031 7783 618 197 28 84 chr2 25037266 25037444 -228219139 - L1MC4 LINE L1 -376 7666 7499 222 118 0 0 chr2 25037493 25037527 -228219056 + (T)n Simple_repeat Simple_repeat 1 34 0 667 233 51 81 chr2 25038099 25038335 -228218248 + MIR SINE MIR 27 255 -7 354 237 41 10 chr2 25038381 25038478 -228218105 + MIR SINE MIR 133 232 -30 207 200 0 0 chr2 25038736 25038781 -228217802 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2113 107 7 0 chr2 25039086 25039376 -228217207 - AluSg SINE Alu -18 292 1 557 255 7 28 chr2 25039888 25040033 -228216550 - FLAM_A SINE Alu 0 142 1 623 210 20 2 chr2 25041024 25041210 -228215373 + L1M4 LINE L1 809 1170 -5372 * 3411 182 14 77 chr2 25041206 25041602 -228214981 + L1MA9 LINE L1 5121 5540 -772 1347 143 35 9 chr2 25041602 25041832 -228214751 - MER46A DNA MER2_type 0 236 1 3411 182 14 77 chr2 25041832 25042498 -228214085 + L1MA9 LINE L1 5540 6274 -38 2625 165 20 16 chr2 25042510 25043020 -228213563 + L1MB7 LINE L1 5315 5826 -358 263 370 101 0 chr2 25044347 25044466 -228212117 - L2 LINE L2 -5 3267 3137 24 53 0 0 chr2 25044802 25044840 -228211743 + AT_rich Low_complexity Low_complexity 1 38 0 242 329 0 0 chr2 25045247 25045317 -228211266 - L2 LINE L2 -962 2352 2283 1134 299 82 20 chr2 25045403 25045981 -228210602 + L2 LINE L2 2687 3299 -14 592 334 58 37 chr2 25046345 25046612 -228209971 - L2 LINE L2 -529 2785 2508 2654 48 0 0 chr2 25046612 25046921 -228209662 + AluY SINE Alu 1 309 -2 592 334 58 37 chr2 25046921 25046979 -228209604 - L2 LINE L2 -806 2508 2453 253 314 105 9 chr2 25047001 25047106 -228209477 - MIR SINE MIR -125 137 23 4515 142 20 10 chr2 25047140 25047934 -228208649 - L1MA5 LINE L1 -2 6298 5497 795 338 7 83 chr2 25049624 25050083 -228206500 + L2 LINE L2 2845 3268 -4 1240 126 42 42 chr2 25050510 25050725 -228205858 - MER20 DNA MER1_type -4 215 1 21 0 0 0 chr2 25051073 25051094 -228205489 + AT_rich Low_complexity Low_complexity 1 21 0 2062 128 3 7 chr2 25051583 25051879 -228204704 + AluSq SINE Alu 1 295 -18 315 279 80 34 chr2 25051923 25052218 -228204365 - L1M3 LINE L1 -623 5560 5254 424 314 238 12 chr2 25052239 25052580 -228204003 - L1M3 LINE L1 -914 5232 4815 225 350 67 8 chr2 25052935 25053055 -228203528 + L2 LINE L2 3137 3263 -9 194 279 45 63 chr2 25053181 25053292 -228203291 - L2 LINE L2 -8 3305 3197 188 379 64 38 chr2 25053289 25053376 -228203207 + L2 LINE L2 2707 2790 -524 * 596 248 98 49 chr2 25053376 25053591 -228202992 - MIR SINE MIR -1 261 31 1762 175 0 29 chr2 25053591 25053900 -228202683 - AluJo SINE Alu -12 300 1 596 248 98 49 chr2 25053900 25053930 -228202653 - MIR SINE MIR -231 31 4 188 379 64 38 chr2 25053930 25054106 -228202477 + L2 LINE L2 2790 2977 -337 2355 92 3 0 chr2 25055234 25055538 -228201045 + AluSc SINE Alu 1 305 -4 2326 69 0 10 chr2 25056791 25057119 -228199464 - AluY SINE Alu 0 325 1 31 44 0 0 chr2 25057122 25057167 -228199416 + AT_rich Low_complexity Low_complexity 1 45 0 1609 99 9 0 chr2 25057444 25057655 -228198928 - AluSg/x SINE Alu -16 294 82 516 288 58 5 chr2 25057715 25057920 -228198663 + L1MEd LINE L1 587 802 -5317 319 256 12 0 chr2 25057935 25058021 -228198562 + HAL1 LINE L1 146 232 -2275 655 265 191 23 chr2 25058042 25058483 -228198100 + HAL1 LINE L1 586 1100 -1407 1161 241 90 40 chr2 25058512 25058911 -228197672 + L2 LINE L2 2895 3313 0 1800 243 189 41 chr2 25058924 25059988 -228196595 + HAL1 LINE L1 1125 2345 -162 628 280 84 29 chr2 25060054 25060293 -228196290 - MLT1J LTR MaLR -132 379 128 4211 167 33 36 chr2 25060441 25060661 -228195922 + L1MB8 LINE L1 5256 5475 -703 1842 167 7 3 chr2 25060661 25060961 -228195622 + AluJo SINE Alu 1 301 -11 4211 167 33 36 chr2 25060961 25061661 -228194922 + L1MB8 LINE L1 5475 6173 -5 453 328 104 16 chr2 25061760 25062068 -228194515 + L1ME3A LINE L1 5555 5889 -281 648 163 0 0 chr2 25062083 25062181 -228194402 + MER2 DNA MER2_type 1 98 -247 715 220 0 8 chr2 25062181 25062313 -228194270 + FLAM_A SINE Alu 1 131 -2 987 147 82 52 chr2 25062334 25062378 -228194205 + MER2 DNA MER2_type 83 124 -221 2039 131 0 10 chr2 25062378 25062669 -228193914 - AluSx SINE Alu -24 288 1 987 147 82 52 chr2 25062669 25062855 -228193728 + MER2 DNA MER2_type 124 320 -25 1716 188 0 7 chr2 25063204 25063502 -228193081 - AluJo SINE Alu -16 296 1 291 337 10 10 chr2 25063932 25064030 -228192553 + MIR SINE MIR 53 150 -112 22 80 0 0 chr2 25064355 25064405 -228192178 + AT_rich Low_complexity Low_complexity 1 50 0 291 54 0 0 chr2 25064921 25064958 -228191625 + (TG)n Simple_repeat Simple_repeat 2 38 0 2392 61 0 3 chr2 25065016 25065311 -228191272 - AluY SINE Alu -17 294 1 21 0 0 0 chr2 25065319 25065340 -228191243 + AT_rich Low_complexity Low_complexity 1 21 0 262 250 0 0 chr2 25065409 25065461 -228191122 - L2 LINE L2 0 3313 3262 203 321 119 0 chr2 25065463 25065547 -228191036 + MIR SINE MIR 156 249 -13 231 165 114 25 chr2 25066033 25066112 -228190471 - LTR67 LTR ERVL -15 542 457 2111 117 0 0 chr2 25066410 25066728 -228189855 + AluSx SINE Alu 3 320 0 211 310 10 40 chr2 25066744 25066844 -228189739 + L2 LINE L2 2217 2313 -1001 755 131 0 0 chr2 25067114 25067221 -228189362 + U6 snRNA snRNA 1 107 0 2656 186 55 10 chr2 25067224 25067822 -228188761 + L1PA13 LINE L1 1552 2176 -4611 245 125 25 0 chr2 25067822 25067862 -228188721 - MSTA LTR MaLR 0 428 388 2323 103 0 0 chr2 25067867 25068179 -228188404 + AluSx SINE Alu 1 312 0 2359 92 19 0 chr2 25068279 25068832 -228187751 - L1P4 LINE L1 -594 5580 5019 22 35 0 0 chr2 25069425 25069454 -228187129 + AT_rich Low_complexity Low_complexity 1 29 0 329 244 51 32 chr2 25069694 25069850 -228186733 - Charlie7 DNA MER1_type -229 2383 2225 1578 100 0 21 chr2 25069854 25070093 -228186490 - L1M2 LINE L1 -521 5770 5537 1576 189 97 120 chr2 25070123 25070137 -228186446 - Charlie7 DNA MER1_type -378 2234 2221 3044 121 43 15 chr2 25070137 25070675 -228185908 + L1MA8 LINE L1 5735 6287 -4 1576 189 97 120 chr2 25070675 25070898 -228185685 - Charlie7 DNA MER1_type -391 2221 1994 1776 136 4 0 chr2 25070898 25071148 -228185435 + AluSx SINE Alu 1 251 -61 1576 189 97 120 chr2 25071148 25071526 -228185057 - Charlie7 DNA MER1_type -618 1994 1637 2405 63 0 26 chr2 25071526 25071829 -228184754 - AluY SINE Alu -16 295 1 1576 189 97 120 chr2 25071829 25072004 -228184579 - Charlie7 DNA MER1_type -975 1637 1460 547 249 173 14 chr2 25072024 25072301 -228184282 - Charlie7 DNA MER1_type -2291 321 1 21 107 0 0 chr2 25072995 25073079 -228183504 + AT_rich Low_complexity Low_complexity 1 84 0 450 354 44 11 chr2 25073362 25073543 -228183040 + MER91A DNA MER1_type 9 195 -1 335 211 61 79 chr2 25075381 25075495 -228181088 + MIR SINE MIR 11 122 -140 2232 114 0 3 chr2 25075811 25076118 -228180465 - AluSq SINE Alu -7 306 1 6058 100 41 2 chr2 25077174 25077282 -228179301 - L1PA13 LINE L1 0 6163 6061 1866 118 55 71 chr2 25077282 25077663 -228178920 - THE1C LTR MaLR 0 375 1 6058 100 41 2 chr2 25077663 25079219 -228177364 - L1PA13 LINE L1 -102 6061 4469 1808 88 95 29 chr2 25079230 25079503 -228177080 - AluY SINE Alu -19 292 2 2251 118 3 0 chr2 25080186 25080492 -228176091 + AluSg SINE Alu 1 307 -3 196 74 0 0 chr2 25081804 25081831 -228174752 - L3 LINE CR1 -174 1403 1377 2225 65 27 7 chr2 25082673 25082967 -228173616 - AluY SINE Alu -11 300 1 224 232 0 0 chr2 25083452 25083508 -228173075 + (TA)n Simple_repeat Simple_repeat 2 57 0 24 53 0 0 chr2 25083542 25083580 -228173003 + AT_rich Low_complexity Low_complexity 1 38 0 195 323 189 14 chr2 25083694 25083911 -228172672 - L2 LINE L2 -215 3098 2844 42 0 0 0 chr2 25084615 25084657 -228171926 + AT_rich Low_complexity Low_complexity 1 42 0 979 276 29 20 chr2 25086392 25086740 -228169843 + L1ME LINE L1 5414 5764 -406 24 53 0 0 chr2 25086843 25086881 -228169702 + AT_rich Low_complexity Low_complexity 1 38 0 222 37 0 0 chr2 25087994 25088021 -228168562 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 380 395 52 32 chr2 25088022 25088270 -228168313 - L2 LINE L2 -14 3258 3006 327 259 72 70 chr2 25088948 25089062 -228167521 - MER5B DNA MER1_type -60 129 2 206 283 71 61 chr2 25089768 25089842 -228166741 + MER5A DNA MER1_type 90 162 -27 2160 90 7 0 chr2 25089842 25090121 -228166462 + AluSp SINE Alu 1 281 -32 393 22 0 0 chr2 25090123 25090169 -228166414 + (TAA)n Simple_repeat Simple_repeat 1 46 0 206 283 71 61 chr2 25090169 25090190 -228166393 + MER5A DNA MER1_type 162 189 0 257 237 155 10 chr2 25090723 25090820 -228165763 + MER5A DNA MER1_type 3 113 -76 247 267 0 23 chr2 25090914 25091000 -228165583 - MER103 DNA DNA -44 122 39 1788 166 13 20 chr2 25091202 25091503 -228165080 + AluJb SINE Alu 1 299 -13 2014 132 7 0 chr2 25091708 25092004 -228164579 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr2 25092573 25092599 -228163984 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 269 173 0 0 chr2 25094287 25094339 -228162244 + L1MB7 LINE L1 6133 6184 0 2258 105 14 0 chr2 25094473 25094769 -228161814 + AluSx SINE Alu 1 300 -12 183 42 0 0 chr2 25095526 25095550 -228161033 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 26 50 0 0 chr2 25096254 25096294 -228160289 + AT_rich Low_complexity Low_complexity 1 40 0 192 326 101 59 chr2 25098742 25099082 -228157501 + L2 LINE L2 2824 3190 -82 754 231 177 9 chr2 25099153 25099695 -228156888 - L1ME LINE L1 -443 5719 5088 * 862 213 7 0 chr2 25099680 25099882 -228156701 + L1ME3 LINE L1 5666 5870 -300 2226 94 7 3 chr2 25100040 25100371 -228156212 - AluSx SINE Alu 0 332 1 369 281 68 14 chr2 25101463 25101609 -228154974 - MER103 DNA DNA -12 154 1 393 294 106 38 chr2 25102062 25102222 -228154361 + MIR3 SINE MIR 10 180 -28 667 263 136 77 chr2 25102359 25102927 -228153656 + HAL1 LINE L1 643 1176 -1331 2181 104 3 7 chr2 25102927 25103216 -228153367 + AluSq SINE Alu 1 288 -25 189 0 0 0 chr2 25103216 25103237 -228153346 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 667 263 136 77 chr2 25103237 25103511 -228153072 + HAL1 LINE L1 1175 1536 -971 2633 301 84 35 chr2 25103530 25105367 -228151216 + L1ME2 LINE L1 36 1962 -4434 2673 234 52 40 chr2 25105467 25105840 -228150743 + L1M4 LINE L1 4229 4596 -1550 2605 46 0 7 chr2 25105840 25106144 -228150439 + AluY SINE Alu 1 302 -9 2673 234 52 40 chr2 25106144 25106728 -228149855 + L1M4 LINE L1 4596 5198 -948 472 228 36 36 chr2 25106719 25106886 -228149697 + L1ME2 LINE L1 3547 3713 -2502 * 2638 145 123 29 chr2 25106877 25107792 -228148791 + L1MC2 LINE L1 5228 6237 -107 1808 213 9 58 chr2 25107773 25107885 -228148698 + L1ME2 LINE L1 5358 5474 -761 * 1862 146 27 10 chr2 25107885 25108179 -228148404 - AluSx SINE Alu -13 299 1 1808 213 9 58 chr2 25108179 25108531 -228148052 + L1ME2 LINE L1 5474 5799 -436 1406 109 43 137 chr2 25108533 25108862 -228147721 + AluYb8 SINE Alu 5 302 -16 1214 127 0 0 chr2 25108862 25109035 -228147548 + AluSg/x SINE Alu 135 307 -3 1225 196 117 50 chr2 25109039 25109441 -228147142 + L1ME2 LINE L1 5796 6224 -9 1447 259 125 35 chr2 25109455 25110325 -228146258 + HAL1 LINE L1 1554 2502 -5 344 326 105 22 chr2 25111736 25111917 -228144666 + L2 LINE L2 1177 1372 -1942 1262 162 63 0 chr2 25111991 25112213 -228144370 - MER46A DNA MER2_type 0 236 1 566 261 162 25 chr2 25113096 25113460 -228143123 - L1MC4a LINE L1 -1643 6165 5752 207 333 95 0 chr2 25113794 25113878 -228142705 - L2 LINE L2 -215 3057 2966 2760 239 40 94 chr2 25113937 25115227 -228141356 + L1MCc LINE L1 17 1237 -5186 2415 167 37 9 chr2 25115349 25115783 -228140800 + LTR45B LTR ERV1 5 491 -40 2875 53 3 3 chr2 25115783 25116138 -228140445 + THE1A LTR MaLR 1 355 0 2415 167 37 9 chr2 25116138 25116169 -228140414 + LTR45B LTR ERV1 491 520 -11 1112 249 74 115 chr2 25116196 25117237 -228139346 + L1MCc LINE L1 1807 2798 -4324 973 130 0 158 chr2 25117237 25117491 -228139092 + MER20 DNA MER1_type 2 215 -4 1112 249 74 115 chr2 25117491 25117591 -228138992 + L1MCc LINE L1 2798 2901 -4221 2353 92 12 0 chr2 25117594 25117919 -228138664 - L1PA10 LINE L1 -556 5612 5284 3669 89 32 2 chr2 25117919 25118440 -228138143 + L1PA10 LINE L1 5616 6157 -11 2078 242 79 17 chr2 25118448 25119305 -228137278 + L1MCc LINE L1 2896 3769 -3172 1093 96 5 70 chr2 25119308 25119495 -228137088 + LTR9 LTR ERV1 438 612 0 2715 170 33 2 chr2 25119510 25119969 -228136614 + HUERS-P3 LTR ERV1 15 487 -8432 447 122 11 44 chr2 25119969 25120059 -228136524 + LTR9 LTR ERV1 440 526 -86 205 43 87 22 chr2 25120060 25120106 -228136477 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1008 254 115 5 chr2 25120106 25120507 -228136076 + L1MCc LINE L1 3767 4211 -2730 4359 212 65 55 chr2 25120511 25120926 -228135657 + L1MCc LINE L1 4292 4701 -2240 2238 98 7 0 chr2 25120926 25121221 -228135362 + AluSx SINE Alu 2 298 -14 4359 212 65 55 chr2 25121221 25121778 -228134805 + L1MCc LINE L1 4701 5251 -1690 2301 104 3 0 chr2 25121778 25122087 -228134496 + AluY SINE Alu 1 310 -1 329 0 24 0 chr2 25122087 25122128 -228134455 + (TA)n Simple_repeat Simple_repeat 2 43 0 4359 212 65 55 chr2 25122128 25122721 -228133862 + L1MCc LINE L1 5250 5875 -1066 847 208 50 6 chr2 25122750 25122909 -228133674 - MER58A DNA MER1_type 0 167 2 858 209 57 8 chr2 25122919 25123163 -228133420 + L1MCc LINE L1 5881 6136 -805 2133 101 49 0 chr2 25123329 25123615 -228132968 - AluSx SINE Alu -12 300 1 2116 136 48 23 chr2 25123793 25124146 -228132437 + THE1B LTR MaLR 1 362 -2 955 126 13 13 chr2 25124148 25124307 -228132276 + THE1B-int LTR MaLR 1 159 -1421 305 219 159 13 chr2 25124409 25124560 -228132023 + L1M4 LINE L1 5120 5292 -854 1058 141 13 0 chr2 25124574 25124730 -228131853 - AluSg/x SINE Alu -13 299 142 2167 111 0 33 chr2 25124731 25124867 -228131716 + AluSx SINE Alu 1 140 -172 2144 97 10 3 chr2 25124867 25125157 -228131426 + AluSg1 SINE Alu 1 292 -17 2167 111 0 33 chr2 25125157 25125327 -228131256 + AluSx SINE Alu 140 297 -15 748 208 8 0 chr2 25125337 25125467 -228131116 + FLAM_A SINE Alu 1 131 -2 451 299 7 39 chr2 25125823 25125977 -228130606 - MLT1I LTR MaLR -190 219 71 312 167 0 0 chr2 25126479 25126527 -228130056 - AluJ/FLAM SINE Alu -218 84 37 3047 145 199 3 chr2 25126536 25127108 -228129475 - LTR12 LTR ERV1 0 688 5 439 200 27 27 chr2 25127124 25127274 -228129309 - pTR5 LTR ERV1 -1094 1344 1195 326 272 0 0 chr2 25127290 25127393 -228129190 + G-rich Low_complexity Low_complexity 1 103 0 373 249 127 14 chr2 25127479 25127692 -228128891 - pTR5 LTR ERV1 -1257 1181 945 307 282 38 46 chr2 25127970 25128101 -228128482 - L1MEd LINE L1 -5018 1101 972 256 292 135 15 chr2 25128101 25128361 -228128222 - HAL1 LINE L1 -1389 1118 828 304 266 54 109 chr2 25128828 25129012 -228127571 - HAL1 LINE L1 -2333 174 1 385 325 132 16 chr2 25129312 25129555 -228127028 - MARNA DNA Mariner -167 419 149 1339 135 9 22 chr2 25129744 25129966 -228126617 + AluJb SINE Alu 86 304 -8 1015 258 175 35 chr2 25130131 25130732 -228125851 - L1MC4a LINE L1 -1870 5938 5254 314 23 0 23 chr2 25131025 25131069 -228125514 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2021 139 72 12 chr2 25132209 25132570 -228124013 - MLT1B LTR MaLR -10 644 1 366 23 0 0 chr2 25132664 25132707 -228123876 + (TG)n Simple_repeat Simple_repeat 1 43 0 26 50 0 0 chr2 25132716 25132756 -228123827 + AT_rich Low_complexity Low_complexity 1 40 0 277 211 19 39 chr2 25132813 25132917 -228123666 - L1ME LINE L1 -325 5796 5695 2416 84 0 3 chr2 25133810 25134118 -228122465 + AluSq SINE Alu 1 307 -6 489 234 57 110 chr2 25135793 25136020 -228120563 - MER112 DNA MER1_type -42 218 4 2095 107 3 30 chr2 25136799 25137099 -228119484 - AluSc SINE Alu -17 292 1 318 287 197 47 chr2 25137513 25137699 -228118884 + HAL1 LINE L1 2176 2333 -174 2182 106 0 39 chr2 25137699 25138011 -228118572 + AluSx SINE Alu 1 300 -12 318 287 197 47 chr2 25138011 25138103 -228118480 + HAL1 LINE L1 2333 2496 -11 589 284 38 19 chr2 25138218 25138429 -228118154 + MIR SINE MIR 48 262 0 600 256 46 26 chr2 25139536 25139731 -228116852 - MLT1L LTR MaLR 0 615 417 192 158 0 0 chr2 25139862 25139900 -228116683 + A-rich Low_complexity Low_complexity 1 38 0 243 229 282 58 chr2 25139918 25140106 -228116477 - MLT1L LTR MaLR -380 235 6 2014 134 0 0 chr2 25140414 25140721 -228115862 + AluSx SINE Alu 1 307 0 2383 79 26 0 chr2 25141040 25141344 -228115239 + AluSq SINE Alu 1 312 -1 480 246 185 82 chr2 25141460 25141650 -228114933 + L1M4 LINE L1 4549 4718 -1428 1627 178 10 40 chr2 25141650 25141953 -228114630 + AluJo SINE Alu 1 294 -18 480 246 185 82 chr2 25141953 25142417 -228114166 + L1M4 LINE L1 4718 5270 -876 22 0 0 0 chr2 25142660 25142682 -228113901 + AT_rich Low_complexity Low_complexity 1 22 0 2316 101 3 0 chr2 25143077 25143374 -228113209 + AluSp SINE Alu 1 298 -15 222 354 71 24 chr2 25143535 25143662 -228112921 + L3 LINE CR1 16 148 -1429 268 359 94 52 chr2 25143662 25143808 -228112775 + L3 LINE CR1 1309 1466 -111 1117 178 23 5 chr2 25143808 25144022 -228112561 - MER20 DNA MER1_type 0 219 2 268 359 94 52 chr2 25144022 25144067 -228112516 + L3 LINE CR1 1466 1508 -69 202 284 98 114 chr2 25144686 25145045 -228111538 + L2 LINE L2 2915 3267 -5 23 101 0 0 chr2 25145407 25145486 -228111097 + AT_rich Low_complexity Low_complexity 1 79 0 509 203 101 7 chr2 25145733 25145871 -228110712 - MER103 DNA DNA 0 166 16 326 24 49 0 chr2 25146269 25146343 -228110240 - AluY SINE Alu 0 316 241 1770 142 53 19 chr2 25147394 25147717 -228108866 - MER7A DNA MER2_type 0 346 15 395 152 76 0 chr2 25148297 25148389 -228108194 - L1ME4a LINE L1 -2 6119 6021 248 279 197 14 chr2 25149421 25149568 -228107015 + MIR3 SINE MIR 9 182 -26 1630 141 0 23 chr2 25149594 25149857 -228106726 - AluSx SINE Alu -11 301 45 532 116 74 11 chr2 25151575 25151670 -228104913 + L1MB5 LINE L1 5828 5928 -246 576 296 13 43 chr2 25152532 25152765 -228103818 + L2 LINE L2 987 1212 -2102 2837 244 128 31 chr2 25152770 25154202 -228102381 + L2 LINE L2 1746 3313 0 292 186 279 0 chr2 25154661 25154747 -228101836 - MER103 DNA DNA -53 113 4 2058 106 3 69 chr2 25155268 25155588 -228100995 + AluSp SINE Alu 1 299 -14 263 331 110 12 chr2 25156452 25156615 -228099968 - MER5A DNA MER1_type -4 185 7 265 281 61 0 chr2 25156713 25156795 -228099788 - L2 LINE L2 0 3272 3186 195 42 0 0 chr2 25156910 25156934 -228099649 + (TA)n Simple_repeat Simple_repeat 2 25 0 27 0 0 0 chr2 25157140 25157167 -228099416 + AT_rich Low_complexity Low_complexity 1 27 0 1977 178 0 0 chr2 25157642 25157946 -228098637 - AluJb SINE Alu -8 304 1 2105 126 0 26 chr2 25158016 25158326 -228098257 + AluSg SINE Alu 1 302 -8 4022 234 109 72 chr2 25159122 25159448 -228097135 - L1MEc LINE L1 -4399 1997 1685 2231 92 0 55 chr2 25159448 25159773 -228096810 - AluY SINE Alu -4 307 1 4022 234 109 72 chr2 25159773 25160157 -228096426 - L1MEc LINE L1 -4711 1685 1317 2307 121 0 0 chr2 25160157 25160464 -228096119 - AluSx SINE Alu -5 307 1 4022 234 109 72 chr2 25160464 25161644 -228094939 - L1MEc LINE L1 -5079 1317 35 836 181 93 10 chr2 25161672 25161877 -228094706 - L1ME3A LINE L1 -3 6167 5946 447 302 102 8 chr2 25162154 25162389 -228094194 + MIR SINE MIR 4 260 -2 1455 94 0 5 chr2 25162574 25162766 -228093817 + AluY SINE Alu 1 191 -120 2343 88 3 3 chr2 25162944 25163249 -228093334 - AluSq SINE Alu -8 305 1 697 263 40 9 chr2 25163375 25163599 -228092984 - MIR SINE MIR -12 250 20 188 319 99 11 chr2 25163739 25163830 -228092753 - L2 LINE L2 -211 3061 2963 1953 134 18 0 chr2 25164239 25164516 -228092067 + AluSx SINE Alu 13 294 -18 2311 69 24 10 chr2 25164549 25164840 -228091743 + AluY SINE Alu 1 295 -16 1982 141 3 10 chr2 25165224 25165522 -228091061 - AluSx SINE Alu -11 301 6 320 291 23 40 chr2 25165862 25166037 -228090546 + GA-rich Low_complexity Low_complexity 5 176 0 225 0 0 0 chr2 25167844 25167869 -228088714 + (A)n Simple_repeat Simple_repeat 1 25 0 25 0 0 0 chr2 25168540 25168565 -228088018 + AT_rich Low_complexity Low_complexity 1 25 0 2797 110 60 13 chr2 25170377 25170841 -228085742 - LTR19A LTR ERV1 0 486 1 185 286 16 0 chr2 25171535 25171598 -228084985 - L2 LINE L2 -56 3257 3194 2301 101 7 13 chr2 25172181 25172488 -228084095 + AluSq SINE Alu 1 305 -8 2394 93 0 0 chr2 25172488 25172788 -228083795 + AluSc SINE Alu 1 300 -9 1591 135 82 32 chr2 25173639 25173920 -228082663 - AluJo SINE Alu -17 295 1 198 226 42 48 chr2 25174122 25174216 -228082367 - MIR SINE MIR -65 143 98 2194 110 7 7 chr2 25174314 25174614 -228081969 + AluSx SINE Alu 3 302 -10 643 163 0 0 chr2 25174721 25174819 -228081764 + AluS SINE Alu 2 99 -214 2485 68 0 13 chr2 25175581 25175891 -228080692 + AluY SINE Alu 1 306 -5 1478 211 31 92 chr2 25176283 25176768 -228079815 - LTR9 LTR ERV1 0 612 227 2574 61 0 10 chr2 25176768 25177078 -228079505 - AluY SINE Alu -4 307 1 1478 211 31 92 chr2 25177078 25177292 -228079291 - LTR9 LTR ERV1 -385 227 1 212 0 36 0 chr2 25177294 25177322 -228079261 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1145 177 72 153 chr2 25177619 25177967 -228078616 - MER4C LTR ERV1 0 465 169 1940 145 54 3 chr2 25177967 25178263 -228078320 - AluSx SINE Alu -1 311 1 1145 177 72 153 chr2 25178263 25178417 -228078166 - MER4C LTR ERV1 -296 169 4 2118 105 0 45 chr2 25178808 25179121 -228077462 + AluSx SINE Alu 1 299 -13 2292 80 7 0 chr2 25179551 25179838 -228076745 + AluSg SINE Alu 1 289 -21 1336 260 58 7 chr2 25179908 25180677 -228075906 - L2 LINE L2 -5 3308 2455 635 149 98 11 chr2 25180680 25180854 -228075729 + AluSx SINE Alu 2 190 -122 2484 84 3 0 chr2 25181088 25181399 -228075184 - AluSp SINE Alu -1 312 1 684 332 82 12 chr2 25181480 25181884 -228074699 + L1M4 LINE L1 3798 4229 -1917 2248 98 10 3 chr2 25182697 25182992 -228073591 + AluSc SINE Alu 1 297 -12 2215 129 0 0 chr2 25183623 25183925 -228072658 + AluSx SINE Alu 2 303 -9 718 125 10 0 chr2 25184113 25184217 -228072366 + AluSq SINE Alu 1 105 -208 1863 151 112 19 chr2 25184217 25184629 -228071954 + LTR7 LTR ERV1 1 450 0 1459 117 0 9 chr2 25184629 25184842 -228071741 + AluSq SINE Alu 101 311 -2 505 182 36 9 chr2 25185126 25185236 -228071347 - MER5A DNA MER1_type -76 113 1 2066 107 0 35 chr2 25185459 25185608 -228070975 - AluSg SINE Alu -31 279 143 2411 55 24 3 chr2 25185608 25185897 -228070686 - AluSp SINE Alu -17 296 2 2066 107 0 35 chr2 25185897 25186036 -228070547 - AluSg SINE Alu -167 143 1 472 268 14 21 chr2 25186321 25186463 -228070120 - MIR SINE MIR -115 147 7 1801 107 53 17 chr2 25186520 25186819 -228069764 - L1PA12 LINE L1 0 6168 5859 2383 74 10 0 chr2 25187228 25187524 -228069059 - AluSq SINE Alu -14 299 1 956 128 0 0 chr2 25187816 25187949 -228068634 - AluSq/x SINE Alu -180 133 1 2288 87 0 7 chr2 25188423 25188721 -228067862 + AluSx SINE Alu 1 296 -16 805 208 7 7 chr2 25189054 25189208 -228067375 - FRAM SINE Alu -30 146 1 352 198 58 12 chr2 25189234 25189320 -228067263 + HsTC2 DNA Tc2 1808 1897 -1 2299 112 0 3 chr2 25190152 25190455 -228066128 - AluSx SINE Alu -10 302 1 428 258 225 0 chr2 25190872 25191081 -228065502 + MIR SINE MIR 2 257 -5 298 240 392 9 chr2 25191531 25191748 -228064835 - L1ME4a LINE L1 -2 6119 5820 322 294 38 31 chr2 25191757 25191917 -228064666 - L1ME4a LINE L1 -420 5701 5541 408 215 47 9 chr2 25193561 25193668 -228062915 + MIR SINE MIR 48 158 -104 385 278 46 0 chr2 25195006 25195114 -228061469 + L2 LINE L2 3197 3309 -4 2323 104 0 0 chr2 25195303 25195592 -228060991 + AluSg SINE Alu 1 289 -21 261 250 36 64 chr2 25195604 25195744 -228060839 - L2 LINE L2 -26 3287 3152 970 86 0 43 chr2 25195760 25195899 -228060684 + FLAM_C SINE Alu 1 133 0 1043 259 122 113 chr2 25196226 25197175 -228059408 - L2 LINE L2 -557 2757 1797 942 172 163 0 chr2 25197175 25197378 -228059205 + MER46A DNA MER2_type 1 236 0 1043 259 122 113 chr2 25197378 25197461 -228059122 - L2 LINE L2 -1517 1797 1716 216 216 0 0 chr2 25197485 25197536 -228059047 + (TG)n Simple_repeat Simple_repeat 2 52 0 2429 63 21 0 chr2 25197704 25197991 -228058592 - AluY SINE Alu -18 293 1 2256 84 16 53 chr2 25198207 25198529 -228058054 - AluSx SINE Alu -2 310 1 2080 111 24 0 chr2 25199235 25199523 -228057060 + AluSx SINE Alu 1 295 -17 42460 41 2 0 chr2 25199555 25205702 -228050881 - L1PA4 LINE L1 0 6155 1 576 205 73 13 chr2 25205810 25205961 -228050622 - L1ME LINE L1 -517 5653 5494 229 254 30 15 chr2 25206342 25206409 -228050174 + CT-rich Low_complexity Low_complexity 3 70 0 1939 249 65 41 chr2 25206448 25207432 -228049151 - L1ME3A LINE L1 -109 6455 5447 2171 92 54 3 chr2 25207437 25207732 -228048851 - AluSx SINE Alu -2 310 1 1733 258 64 58 chr2 25207757 25209128 -228047455 - L1ME3A LINE L1 -2168 4372 2993 1206 140 0 0 chr2 25209129 25209293 -228047290 + AluSg/x SINE Alu 134 297 -15 373 202 138 136 chr2 25209295 25209528 -228047055 - L1MEc LINE L1 -3542 2998 2767 762 169 0 22 chr2 25209528 25209664 -228046919 + FLAM_C SINE Alu 1 133 0 373 202 138 136 chr2 25209664 25209735 -228046848 - L1MEc LINE L1 -3773 2767 2698 2442 92 0 0 chr2 25209735 25210038 -228046545 - AluSq SINE Alu -10 303 1 373 202 138 136 chr2 25210038 25210163 -228046420 - L1MEc LINE L1 -3842 2698 2575 2228 128 0 3 chr2 25210163 25210475 -228046108 - AluSx SINE Alu -1 311 1 373 202 138 136 chr2 25210475 25210513 -228046070 - L1MEc LINE L1 -3965 2575 2578 2398 73 3 23 chr2 25210513 25210680 -228045903 - AluSg SINE Alu -13 297 137 2652 64 0 0 chr2 25210680 25210991 -228045592 - AluY SINE Alu 0 311 1 2398 73 3 23 chr2 25210991 25211125 -228045458 - AluSg SINE Alu -173 137 2 373 202 138 136 chr2 25211125 25211202 -228045381 - L1MEc LINE L1 -3961 2579 2504 412 297 100 46 chr2 25211217 25211699 -228044884 - L1MEc LINE L1 -4576 2145 1638 543 251 108 70 chr2 25211700 25212015 -228044568 - L1MEc LINE L1 -4958 1582 1256 198 0 0 0 chr2 25212133 25212155 -228044428 + (T)n Simple_repeat Simple_repeat 1 22 0 2348 105 7 0 chr2 25212194 25212499 -228044084 + AluSx SINE Alu 1 307 -5 246 233 0 0 chr2 25213128 25213188 -228043395 - L1MEc LINE L1 -5974 556 497 258 56 0 0 chr2 25213847 25213883 -228042700 + (CA)n Simple_repeat Simple_repeat 1 36 0 1993 148 11 0 chr2 25214203 25214487 -228042096 + AluJo SINE Alu 15 301 -11 223 244 61 49 chr2 25214599 25214681 -228041902 - L2 LINE L2 -4 3268 3186 21 0 0 0 chr2 25217605 25217626 -228038957 + AT_rich Low_complexity Low_complexity 1 21 0 460 179 232 66 chr2 25222723 25222874 -228033709 - FAM SINE Alu -9 40 1 2219 118 0 10 chr2 25222921 25223225 -228033358 - AluSx SINE Alu -11 301 1 2511 63 3 3 chr2 25223837 25224136 -228032447 + AluSq SINE Alu 1 299 -14 21 36 0 0 chr2 25224562 25224590 -228031993 + GC_rich Low_complexity Low_complexity 1 28 0 1791 129 0 4 chr2 25224591 25224832 -228031751 - AluJb SINE Alu -38 274 35 994 212 110 114 chr2 25225753 25226315 -228030268 - L1ME3A LINE L1 -315 5855 5296 245 314 181 18 chr2 25226011 25226349 -228030234 - L1PA8A LINE L1 -479 5652 5260 * 336 322 72 13 chr2 25226349 25226501 -228030082 - MIR3 SINE MIR -2 206 46 319 326 155 11 chr2 25227567 25227754 -228028829 - MIR SINE MIR -48 214 1 210 360 62 56 chr2 25227777 25227955 -228028628 - L3 LINE CR1 -69 1508 1330 2406 107 0 0 chr2 25228237 25228546 -228028037 - AluSx SINE Alu -3 309 1 2619 45 7 7 chr2 25228642 25228950 -228027633 - AluY SINE Alu -2 309 2 477 270 56 60 chr2 25229187 25229274 -228027309 + MIR SINE MIR 20 106 -156 2422 78 7 0 chr2 25229274 25229568 -228027015 - AluSg SINE Alu -14 296 1 477 270 56 60 chr2 25229568 25229695 -228026888 + MIR SINE MIR 106 233 -29 245 200 0 104 chr2 25231045 25231170 -228025413 + G-rich Low_complexity Low_complexity 3 114 0 210 125 0 54 chr2 25231181 25231237 -228025346 + (CGGGGG)n Simple_repeat Simple_repeat 3 55 0 211 179 0 95 chr2 25231246 25231330 -228025253 + G-rich Low_complexity Low_complexity 2 77 0 205 306 24 0 chr2 25231759 25231844 -228024739 + L2 LINE L2 1864 1950 -1364 1262 304 114 28 chr2 25231866 25232958 -228023625 + L2 LINE L2 2134 3313 0 253 202 64 55 chr2 25233004 25233113 -228023470 - MIR SINE MIR -60 148 39 2364 95 7 0 chr2 25234881 25235177 -228021406 + AluSx SINE Alu 1 298 -14 951 242 127 25 chr2 25236293 25236686 -228019897 - L2 LINE L2 -696 2618 2186 589 66 0 0 chr2 25237123 25237199 -228019384 - MER30 DNA MER1_type -154 76 1 253 0 54 0 chr2 25237628 25237665 -228018918 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 197 77 0 0 chr2 25237991 25238017 -228018566 + MIR SINE MIR 63 88 -120 2332 93 3 0 chr2 25238169 25238458 -228018125 - AluSx SINE Alu -11 301 12 375 267 7 44 chr2 25239536 25239671 -228016912 - L2 LINE L2 0 3272 3143 236 306 90 0 chr2 25241178 25241289 -228015294 + MIR3 SINE MIR 37 157 -51 1028 209 19 14 chr2 25242420 25242466 -228014117 + MER58A DNA MER1_type 4 48 -2372 1550 176 0 0 chr2 25242466 25242704 -228013879 - AluJb SINE Alu -19 293 56 1028 209 19 14 chr2 25242704 25242867 -228013716 + MER58A DNA MER1_type 48 214 -10 1083 83 7 0 chr2 25244043 25244187 -228012396 + THE1A LTR MaLR 1 145 -210 557 300 100 39 chr2 25244406 25244736 -228011847 + L2 LINE L2 2941 3290 -23 353 221 54 20 chr2 25244911 25245031 -228011552 + MIR SINE MIR 34 154 -54 1071 151 6 6 chr2 25245818 25245984 -228010599 - AluJo SINE Alu -146 166 1 424 339 46 6 chr2 25246719 25246893 -228009690 + MIR3 SINE MIR 25 205 -3 30 0 0 0 chr2 25247061 25247091 -228009492 + AT_rich Low_complexity Low_complexity 1 30 0 1949 119 3 85 chr2 25247098 25247416 -228009167 + AluSq SINE Alu 1 320 0 253 0 0 0 chr2 25247416 25247444 -228009139 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 198 0 0 0 chr2 25247443 25247465 -228009118 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 1546 202 32 7 chr2 25247550 25247832 -228008751 - AluJb SINE Alu -21 291 3 1670 163 9 71 chr2 25247956 25248282 -228008301 + AluJo SINE Alu 5 310 -2 360 220 110 46 chr2 25249015 25249124 -228007459 + MER63 DNA MER1_type 4 745 -91 2516 115 0 0 chr2 25249427 25249739 -228006844 + AluSq SINE Alu 1 312 -1 576 0 0 0 chr2 25249739 25249803 -228006780 + (TA)n Simple_repeat Simple_repeat 2 65 0 224 170 0 21 chr2 25250172 25250219 -228006364 - L2 LINE L2 -4 3309 3264 2341 85 7 3 chr2 25250284 25250577 -228006006 + AluSx SINE Alu 1 294 -18 407 275 81 19 chr2 25250669 25250829 -228005754 - MIR SINE MIR -8 254 85 1256 234 67 44 chr2 25250844 25251280 -228005303 + MLT1C LTR MaLR 14 457 -10 241 282 99 60 chr2 25251373 25251625 -228004958 + L2 LINE L2 2821 3082 -190 186 43 0 0 chr2 25251712 25251735 -228004848 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 375 302 9 0 chr2 25252027 25252133 -228004450 + MLT1L LTR MaLR 470 576 -39 2340 64 41 7 chr2 25252261 25252556 -228004027 + AluY SINE Alu 1 305 -6 2153 129 6 3 chr2 25254522 25254833 -228001750 - AluSx SINE Alu 0 312 1 2251 112 7 0 chr2 25254941 25255236 -228001347 - AluSx SINE Alu -13 299 3 2115 131 0 3 chr2 25255329 25255620 -228000963 + AluSx SINE Alu 1 290 -22 278 196 0 0 chr2 25256467 25256518 -228000065 + L2 LINE L2 3262 3312 -1 463 313 48 45 chr2 25257149 25257462 -227999121 - LTR16C LTR ERVL -18 473 160 310 322 6 17 chr2 25258177 25258357 -227998226 + (TG)n Simple_repeat Simple_repeat 1 178 0 220 267 6 6 chr2 25258372 25258548 -227998035 + (TG)n Simple_repeat Simple_repeat 1 176 0 180 238 0 0 chr2 25258619 25258703 -227997880 + (TG)n Simple_repeat Simple_repeat 1 84 0 407 297 0 6 chr2 25258723 25258888 -227997695 + (TG)n Simple_repeat Simple_repeat 1 164 0 437 316 0 0 chr2 25258903 25259080 -227997503 + (TG)n Simple_repeat Simple_repeat 1 177 0 281 335 0 11 chr2 25259097 25259279 -227997304 + (TG)n Simple_repeat Simple_repeat 1 180 0 208 323 31 31 chr2 25259772 25259899 -227996684 - MIR SINE MIR -99 163 37 875 210 6 2 chr2 25260400 25260599 -227995984 - MLT1D LTR MaLR -327 178 2 2161 110 31 3 chr2 25260801 25261092 -227995491 - AluSx SINE Alu -13 299 1 528 298 44 0 chr2 25261404 25261585 -227994998 - MIR SINE MIR -64 198 10 2467 84 0 0 chr2 25261936 25262246 -227994337 + AluY SINE Alu 1 310 -1 2284 102 0 46 chr2 25262982 25263305 -227993278 + AluSx SINE Alu 1 308 -4 988 26 0 0 chr2 25263516 25263633 -227992950 + THE1A LTR MaLR 239 355 0 11140 87 13 9 chr2 25263633 25265031 -227991552 + THE1A-int LTR MaLR 1 1407 -173 2263 132 0 0 chr2 25265031 25265342 -227991241 - AluSq SINE Alu -2 311 1 11140 87 13 9 chr2 25265342 25265517 -227991066 + THE1A-int LTR MaLR 1407 1580 0 2550 89 14 0 chr2 25265517 25265867 -227990716 + THE1A LTR MaLR 1 355 0 203 253 23 58 chr2 25266474 25266521 -227990062 + MIR SINE MIR 46 90 -172 3770 86 0 4 chr2 25266521 25267034 -227989549 + MER9 LTR ERVK 1 511 0 203 253 23 58 chr2 25267034 25267073 -227989510 + MIR SINE MIR 90 129 -133 250 103 0 0 chr2 25267110 25267149 -227989434 + MIR SINE MIR 205 243 -19 378 308 71 25 chr2 25269036 25269276 -227987307 + L1ME LINE L1 5572 5822 -299 267 306 73 16 chr2 25269883 25270007 -227986576 - MIR SINE MIR -85 177 47 1550 190 136 15 chr2 25270125 25270536 -227986047 + LOR1b LTR ERV1 1 461 0 558 0 0 0 chr2 25271467 25271529 -227985054 + (TG)n Simple_repeat Simple_repeat 2 63 0 2162 107 6 50 chr2 25271929 25272247 -227984336 - AluSx SINE Alu -8 304 1 206 192 77 0 chr2 25272864 25272916 -227983667 + MIR SINE MIR 90 145 -63 197 262 48 29 chr2 25273046 25273149 -227983434 + L3 LINE CR1 770 874 -703 2115 140 0 0 chr2 25273231 25273538 -227983045 + AluSx SINE Alu 3 309 -3 491 317 65 5 chr2 25273677 25273863 -227982720 + L3 LINE CR1 1244 1440 -137 846 157 124 6 chr2 25275961 25276139 -227980444 + MER3 DNA MER1_type 1 199 -10 299 189 0 27 chr2 25276178 25276252 -227980331 + MER117 DNA MER1_type 28 99 -98 239 200 20 0 chr2 25276472 25276522 -227980061 + L2 LINE L2 3184 3234 -38 1238 129 54 42 chr2 25276535 25276775 -227979808 - AluJo SINE Alu -6 306 64 398 289 94 13 chr2 25276827 25276976 -227979607 - Charlie8 DNA MER1_type -2241 176 16 2311 108 3 0 chr2 25279512 25279817 -227976766 + AluSx SINE Alu 1 306 -6 252 287 74 0 chr2 25280453 25280561 -227976022 - MIR SINE MIR -66 196 81 2608 44 0 31 chr2 25280807 25281128 -227975455 + AluY SINE Alu 1 311 0 452 139 70 0 chr2 25281142 25281228 -227975355 + L1MB5 LINE L1 6022 6113 -61 3117 73 20 7 chr2 25281651 25282089 -227974494 + MLT2A1 LTR ERVL 1 444 0 729 160 0 16 chr2 25282100 25282225 -227974358 - FLAM_C SINE Alu -15 128 6 3040 172 56 2 chr2 25282498 25282547 -227974036 + L1MB4 LINE L1 5524 5569 -611 2294 88 10 10 chr2 25282547 25282854 -227973729 + AluSx SINE Alu 1 307 -5 3040 172 56 2 chr2 25282854 25283416 -227973167 + L1MB4 LINE L1 5569 6168 -12 567 258 68 84 chr2 25283439 25283723 -227972860 + L1MC4a LINE L1 5600 5880 -1928 2052 121 11 0 chr2 25283723 25283995 -227972588 + AluSx SINE Alu 21 295 -17 567 258 68 84 chr2 25283995 25284020 -227972563 + L1MC4a LINE L1 5880 5904 -1904 414 0 0 0 chr2 25284030 25284076 -227972507 + (TG)n Simple_repeat Simple_repeat 1 46 0 363 226 47 74 chr2 25284247 25284437 -227972146 + L1ME LINE L1 82 266 -5853 1517 156 53 23 chr2 25284872 25285135 -227971448 + AluJo SINE Alu 42 312 0 624 287 91 33 chr2 25285187 25285843 -227970740 + L1ME LINE L1 792 1475 -4654 809 174 131 24 chr2 25285862 25286149 -227970434 + MSTD LTR MaLR 5 396 0 296 298 153 32 chr2 25286151 25286497 -227970086 + L1ME LINE L1 1533 1920 -4390 1365 263 113 57 chr2 25286571 25286932 -227969651 + L1ME LINE L1 2657 2996 -3133 1532 131 151 4 chr2 25286932 25287191 -227969392 + AluSg SINE Alu 1 297 -13 1365 263 113 57 chr2 25287191 25287275 -227969308 + L1ME LINE L1 2996 3074 -3055 2350 75 0 26 chr2 25287275 25287580 -227969003 + AluY SINE Alu 1 297 -14 1365 263 113 57 chr2 25287580 25287937 -227968646 + L1ME LINE L1 3074 3529 -2600 2118 143 7 0 chr2 25287937 25288244 -227968339 - AluJo SINE Alu -3 309 1 1365 263 113 57 chr2 25288244 25288435 -227968148 + L1ME LINE L1 3529 3708 -2421 2390 93 0 31 chr2 25288569 25288892 -227967691 + AluSq SINE Alu 1 313 0 275 215 101 0 chr2 25288906 25288985 -227967598 - MIR SINE MIR -67 141 55 274 278 62 10 chr2 25289373 25289470 -227967113 - MIR SINE MIR -70 192 91 199 336 136 0 chr2 25293191 25293331 -227963252 - MIR3 SINE MIR -7 201 43 1733 186 11 0 chr2 25294548 25294827 -227961756 - AluJo SINE Alu -30 282 1 190 270 124 0 chr2 25297458 25297547 -227959036 + L2 LINE L2 3179 3278 -35 2202 63 80 14 chr2 25297726 25298012 -227958571 + AluY SINE Alu 1 311 0 208 365 112 18 chr2 25298139 25298309 -227958274 - MIR SINE MIR -55 207 22 2390 91 3 0 chr2 25299269 25299565 -227957018 + AluSx SINE Alu 1 297 -15 289 336 0 24 chr2 25299908 25300033 -227956550 - L2 LINE L2 -258 3055 2934 188 233 0 0 chr2 25300147 25300190 -227956393 + L2 LINE L2 3201 3243 -29 961 184 18 18 chr2 25300297 25300515 -227956068 + MER20 DNA MER1_type 2 219 0 2177 113 0 10 chr2 25301310 25301602 -227954981 + AluSx SINE Alu 1 289 -23 2388 93 0 0 chr2 25301603 25301903 -227954680 + AluSg SINE Alu 1 300 -10 187 276 233 9 chr2 25302719 25302835 -227953748 + MER5A DNA MER1_type 20 161 -28 2521 75 0 3 chr2 25303007 25303312 -227953271 - AluSx SINE Alu -8 304 1 290 336 188 0 chr2 25303740 25303889 -227952694 + MER5B DNA MER1_type 1 177 -1 196 354 164 22 chr2 25304134 25304501 -227952082 + L2 LINE L2 2554 2972 -342 303 292 125 8 chr2 25304636 25304756 -227951827 + L2 LINE L2 3139 3272 0 2202 133 25 5 chr2 25305545 25305913 -227950670 - THE1C LTR MaLR 0 375 1 241 321 148 46 chr2 25306207 25306444 -227950139 + MIR SINE MIR 2 262 0 2391 223 79 37 chr2 25307200 25307261 -227949322 - MER45B DNA AcHobo -306 734 677 2277 116 0 0 chr2 25307261 25307554 -227949029 + AluSx SINE Alu 1 293 -19 2391 223 79 37 chr2 25307554 25308085 -227948498 - MER45B DNA AcHobo -363 677 112 2218 91 3 14 chr2 25308085 25308394 -227948189 + AluSq SINE Alu 1 306 0 2391 223 79 37 chr2 25308394 25308417 -227948166 - MER45B DNA AcHobo -928 112 91 2657 251 69 10 chr2 25308462 25309335 -227947248 - L1MEc LINE L1 -2091 4124 3201 2165 102 17 3 chr2 25309408 25309703 -227946880 - AluSx SINE Alu -13 299 1 3351 185 40 3 chr2 25309726 25310348 -227946235 + Tigger7 DNA MER2_type 1 645 -88 1193 126 31 0 chr2 25310344 25310535 -227946048 + Tigger7 DNA MER2_type 2291 2487 0 * 868 225 88 45 chr2 25310535 25310788 -227945795 - L1MEc LINE L1 -3121 3094 2818 2476 57 3 14 chr2 25310788 25311085 -227945498 - AluY SINE Alu -17 294 1 868 225 88 45 chr2 25311085 25311205 -227945378 - L1MEc LINE L1 -3397 2818 2705 719 188 21 0 chr2 25311208 25311352 -227945231 - L1MEc LINE L1 -3675 2540 2394 207 0 0 0 chr2 25311354 25311377 -227945206 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 923 118 0 0 chr2 25311379 25311498 -227945085 - AluSq/x SINE Alu -194 119 1 230 254 0 0 chr2 25311502 25311565 -227945018 - L1MEc LINE L1 -3824 2391 2329 1161 166 0 21 chr2 25311566 25311759 -227944824 - AluJo SINE Alu -10 302 114 963 141 0 0 chr2 25311761 25311896 -227944687 + AluSg/x SINE Alu 139 273 -39 600 228 0 0 chr2 25311926 25312049 -227944534 - AluJo SINE Alu -187 125 3 2531 253 53 50 chr2 25312050 25312137 -227944446 - L1MEc LINE L1 -4020 2376 2291 1939 143 17 14 chr2 25312137 25312430 -227944153 - AluJb SINE Alu -10 302 9 2531 253 53 50 chr2 25312430 25312736 -227943847 - L1MEc LINE L1 -4105 2291 1987 1613 190 29 26 chr2 25312736 25313047 -227943536 + AluJo SINE Alu 1 312 0 2531 253 53 50 chr2 25313047 25313624 -227942959 - L1MEc LINE L1 -4409 1987 1399 2338 97 7 0 chr2 25313624 25313922 -227942661 - AluSg SINE Alu -10 300 1 2531 253 53 50 chr2 25313922 25314146 -227942437 - L1MEc LINE L1 -4997 1399 1177 1405 176 4 0 chr2 25314148 25314375 -227942208 - AluJb SINE Alu 0 312 85 734 234 31 80 chr2 25314380 25314637 -227941946 - L1MEc LINE L1 -5226 1170 943 2264 113 0 3 chr2 25314637 25314930 -227941653 + AluSg SINE Alu 1 292 -18 734 234 31 80 chr2 25314930 25315120 -227941463 - L1MEc LINE L1 -5453 943 745 788 300 94 38 chr2 25315136 25315616 -227940967 - L1MEc LINE L1 -5868 528 22 426 204 0 0 chr2 25315754 25315847 -227940736 + CT-rich Low_complexity Low_complexity 2 94 0 211 277 0 0 chr2 25316067 25316114 -227940469 + L2 LINE L2 3210 3256 -16 444 293 48 52 chr2 25318751 25318952 -227937631 + L3 LINE CR1 1127 1328 -249 2389 95 0 0 chr2 25318952 25319247 -227937336 + AluSq SINE Alu 11 305 -8 444 293 48 52 chr2 25319247 25319274 -227937309 + L3 LINE CR1 1328 1354 -223 741 192 0 0 chr2 25319827 25319957 -227936626 + FLAM_A SINE Alu 4 133 0 369 0 0 0 chr2 25320195 25320236 -227936347 + (TG)n Simple_repeat Simple_repeat 2 42 0 2091 143 0 0 chr2 25320364 25320658 -227935925 - AluJo SINE Alu -18 294 1 467 302 0 0 chr2 25320658 25320787 -227935796 - L1ME2 LINE L1 -47 6117 5989 1031 90 53 53 chr2 25320834 25321023 -227935560 + Tigger2a DNA MER2_type 2 190 -244 1710 135 0 4 chr2 25321025 25321269 -227935314 + AluJb SINE Alu 1 243 -69 1310 108 0 6 chr2 25321270 25321446 -227935137 + AluSq SINE Alu 129 303 -10 387 147 29 0 chr2 25321446 25321514 -227935069 + Tigger2a DNA MER2_type 365 434 0 292 205 128 0 chr2 25321580 25321658 -227934925 - L1ME1 LINE L1 -20 6146 6059 383 253 47 33 chr2 25321732 25321882 -227934701 + MIR SINE MIR 61 212 -50 413 148 12 0 chr2 25322410 25322491 -227934092 + GA-rich Low_complexity Low_complexity 1 82 0 1917 139 33 0 chr2 25322525 25322822 -227933761 + AluSx SINE Alu 1 306 0 2173 125 17 0 chr2 25322923 25323218 -227933365 - AluSx SINE Alu -12 300 1 2393 98 0 3 chr2 25323406 25323711 -227932872 - AluY SINE Alu -7 304 1 466 229 29 0 chr2 25324050 25324155 -227932428 - MIR SINE MIR -91 171 64 2134 100 7 0 chr2 25324321 25324600 -227931983 + AluSx SINE Alu 20 300 -12 2116 119 44 0 chr2 25325126 25325420 -227931163 + AluSq SINE Alu 1 307 -6 2242 126 3 0 chr2 25325990 25326300 -227930283 + AluSx SINE Alu 1 311 -1 2410 105 0 3 chr2 25326317 25326623 -227929960 + AluSp SINE Alu 1 305 -8 349 288 26 110 chr2 25327171 25327435 -227929148 + L2 LINE L2 2101 2342 -972 363 167 69 135 chr2 25328230 25328476 -227928107 + MLT1G LTR MaLR 241 492 -63 1199 164 43 5 chr2 25328479 25328687 -227927896 - AluJb SINE Alu -10 302 87 353 212 0 0 chr2 25328690 25328756 -227927827 + MLT1G LTR MaLR 530 595 0 2029 112 51 7 chr2 25328929 25329223 -227927360 - AluSc SINE Alu -2 307 1 1486 166 36 62 chr2 25329493 25329645 -227926938 - AluJo SINE Alu -4 308 154 2113 106 41 10 chr2 25329645 25329937 -227926646 + AluSx SINE Alu 3 303 -9 1486 166 36 62 chr2 25329937 25329983 -227926600 - AluJo SINE Alu -158 154 108 189 107 0 0 chr2 25329983 25330011 -227926572 + (TG)n Simple_repeat Simple_repeat 1 28 0 1486 166 36 62 chr2 25330011 25330118 -227926465 - AluJo SINE Alu -204 108 10 493 267 8 15 chr2 25330152 25330283 -227926300 + MIR SINE MIR 22 151 -111 875 158 7 27 chr2 25330460 25330606 -227925977 + FLAM_C SINE Alu 1 143 0 540 81 0 0 chr2 25330830 25330904 -227925679 + (TG)n Simple_repeat Simple_repeat 1 74 0 255 231 0 0 chr2 25331835 25331887 -227924696 + MIR SINE MIR 103 154 -108 272 228 27 87 chr2 25332560 25332678 -227923905 + MIR3 SINE MIR 24 133 -75 2211 113 0 7 chr2 25332678 25332971 -227923612 + AluSq SINE Alu 10 300 -13 272 228 27 87 chr2 25332971 25333001 -227923582 + MIR3 SINE MIR 133 163 -45 2309 108 7 0 chr2 25333814 25334119 -227922464 - AluSx SINE Alu -5 307 1 2416 86 0 0 chr2 25334682 25334973 -227921610 + AluSc SINE Alu 3 293 -16 394 288 69 6 chr2 25335175 25335335 -227921248 + MIR3 SINE MIR 24 193 -15 201 211 83 110 chr2 25336088 25336197 -227920386 - MIR SINE MIR -44 218 113 23 54 0 0 chr2 25338053 25338090 -227918493 + GC_rich Low_complexity Low_complexity 1 37 0 24 67 0 0 chr2 25338261 25338306 -227918277 + GC_rich Low_complexity Low_complexity 1 45 0 23 101 0 0 chr2 25338478 25338557 -227918026 + GC_rich Low_complexity Low_complexity 1 79 0 953 122 0 27 chr2 25338671 25338818 -227917765 + AluJb SINE Alu 170 312 0 2499 85 0 0 chr2 25338831 25339137 -227917446 + AluSc SINE Alu 1 306 -3 832 110 0 0 chr2 25339303 25339412 -227917171 + AluSp/q SINE Alu 189 297 -16 239 0 0 31 chr2 25339412 25339444 -227917139 + (TA)n Simple_repeat Simple_repeat 1 31 0 475 290 35 7 chr2 25339537 25339595 -227916988 + MIR SINE MIR 6 61 -201 1748 162 7 4 chr2 25339595 25339866 -227916717 - AluJb SINE Alu -39 273 2 475 290 35 7 chr2 25339866 25339952 -227916631 + MIR SINE MIR 61 154 -108 2357 95 3 0 chr2 25340044 25340340 -227916243 - AluSc SINE Alu -12 297 1 2370 97 6 3 chr2 25340973 25341284 -227915299 - AluSq SINE Alu -1 312 1 2023 147 0 16 chr2 25341758 25342072 -227914511 - AluSx SINE Alu -3 309 1 611 192 8 8 chr2 25342308 25342433 -227914150 + L2 LINE L2 3189 3313 0 2235 92 0 3 chr2 25342444 25342728 -227913855 - AluSg SINE Alu -27 283 1 2259 95 0 13 chr2 25343448 25343752 -227912831 + AluSg SINE Alu 9 308 -2 186 43 0 0 chr2 25344670 25344693 -227911890 + (T)n Simple_repeat Simple_repeat 1 23 0 777 196 0 0 chr2 25346993 25347126 -227909457 - FLAM_A SINE Alu 0 133 1 245 231 0 0 chr2 25348340 25348392 -227908191 + L2 LINE L2 3221 3272 0 629 244 50 20 chr2 25350214 25350415 -227906168 + L1M4 LINE L1 4572 4778 -1368 2282 119 0 3 chr2 25350883 25351195 -227905388 + AluSx SINE Alu 1 311 -1 373 297 48 0 chr2 25351267 25351411 -227905172 + MIR3 SINE MIR 47 199 -9 28 61 0 0 chr2 25352013 25352062 -227904521 + AT_rich Low_complexity Low_complexity 1 49 0 1939 132 3 20 chr2 25352146 25352442 -227904141 + AluJb SINE Alu 1 291 -21 1068 268 82 66 chr2 25352458 25353240 -227903343 - L1ME4a LINE L1 -14 6107 5313 816 147 23 0 chr2 25353240 25353369 -227903214 - FLAM_A SINE Alu -1 132 1 1068 268 82 66 chr2 25353369 25353388 -227903195 - L1ME4a LINE L1 -808 5313 5296 400 336 186 11 chr2 25354185 25354545 -227902038 + L1MEc LINE L1 474 896 -5929 2453 67 3 0 chr2 25354975 25355272 -227901311 + AluY SINE Alu 1 298 -13 1550 265 85 44 chr2 25355286 25356118 -227900465 + L1MEc LINE L1 1014 2011 -4814 336 228 83 62 chr2 25356994 25357139 -227899444 - MER5A DNA MER1_type -6 183 36 231 263 0 0 chr2 25357176 25357233 -227899350 + CT-rich Low_complexity Low_complexity 2 58 0 1048 184 61 5 chr2 25358799 25359011 -227897572 + MIR SINE MIR 2 225 -37 188 320 136 34 chr2 25359439 25359880 -227896703 + L2 LINE L2 1934 2419 -895 249 263 141 0 chr2 25361598 25361697 -227894886 - L1ME4a LINE L1 -43 6078 5966 2399 68 10 7 chr2 25361757 25362053 -227894530 + AluY SINE Alu 1 297 -14 326 178 78 101 chr2 25362174 25362303 -227894280 + MLT1K LTR MaLR 460 585 -3 509 298 30 0 chr2 25363408 25363576 -227893007 + MIR SINE MIR 89 261 -1 1794 120 10 58 chr2 25363755 25364046 -227892537 + AluJb SINE Alu 1 277 -35 326 205 84 0 chr2 25364131 25364214 -227892369 - MIR SINE MIR -43 219 130 400 256 73 29 chr2 25364588 25364725 -227891858 - MIR SINE MIR -89 173 31 770 205 54 11 chr2 25364835 25365020 -227891563 + L1MD2 LINE L1 6165 6357 -2 1380 154 66 4 chr2 25365033 25365306 -227891277 + AluSx SINE Alu 4 293 -19 13098 116 31 14 chr2 25365562 25367590 -227888993 + Tigger1 DNA MER2_type 89 2151 -267 1245 181 14 113 chr2 25367592 25367688 -227888895 + L1M4 LINE L1 2790 2894 -3252 203 79 26 0 chr2 25367688 25367726 -227888857 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1245 181 14 113 chr2 25367726 25367743 -227888840 + L1M4 LINE L1 2894 2911 -3235 2084 113 18 0 chr2 25367743 25368026 -227888557 - AluSx SINE Alu -24 288 1 1245 181 14 113 chr2 25368026 25368336 -227888247 + L1M4 LINE L1 2911 3172 -2974 1956 125 0 48 chr2 25369058 25369369 -227887214 - AluSp SINE Alu -17 296 1 357 293 134 21 chr2 25369926 25370165 -227886418 + L1ME LINE L1 5366 5631 -490 1243 73 12 0 chr2 25370253 25370418 -227886165 - LTR13 LTR ERVK 0 1007 841 * 1564 54 64 0 chr2 25370410 25370613 -227885970 - LTR13 LTR ERVK -791 216 1 247 286 59 8 chr2 25370757 25370876 -227885707 + L1ME LINE L1 5773 5897 -224 1846 154 17 3 chr2 25370888 25371180 -227885403 + AluJo SINE Alu 1 296 -16 2258 109 6 10 chr2 25371402 25371714 -227884869 + AluSx SINE Alu 1 311 -1 205 296 174 9 chr2 25371792 25371907 -227884676 - MIR SINE MIR -93 169 36 2209 106 11 0 chr2 25372188 25372472 -227884111 - AluSx SINE Alu -25 287 1 259 288 144 19 chr2 25372803 25372963 -227883620 - L2 LINE L2 -11 3302 3123 300 73 0 24 chr2 25372980 25373021 -227883562 + MLT1K LTR MaLR 547 586 -2 2145 125 7 0 chr2 25373377 25373673 -227882910 - AluSg SINE Alu -12 298 1 253 268 21 52 chr2 25373861 25373958 -227882625 + L2 LINE L2 3218 3311 -2 2320 91 3 7 chr2 25374335 25374643 -227881940 + AluSx SINE Alu 1 307 -5 2343 68 0 4 chr2 25374866 25375175 -227881408 - AluSc SINE Alu 0 308 1 2001 136 14 0 chr2 25375179 25375466 -227881117 - AluSx SINE Alu -21 291 1 23 0 0 0 chr2 25375564 25375587 -227880996 + AT_rich Low_complexity Low_complexity 1 23 0 188 316 38 25 chr2 25376250 25376329 -227880254 + MIR SINE MIR 61 140 -122 1286 108 48 0 chr2 25376595 25376781 -227879802 - AluY SINE Alu -116 195 1 726 117 9 0 chr2 25376789 25376900 -227879683 - FLAM_C SINE Alu 0 143 32 332 187 133 0 chr2 25376901 25376976 -227879607 - L1MA9 LINE L1 -69 6243 6159 1312 156 12 56 chr2 25377009 25377259 -227879324 + L1MA9 LINE L1 5712 5950 -362 2106 108 3 26 chr2 25377259 25377564 -227879019 + AluSq SINE Alu 1 298 -15 326 294 69 4 chr2 25377859 25378015 -227878568 + MIR3 SINE MIR 17 189 -19 2135 114 0 39 chr2 25378387 25378694 -227877889 - AluSx SINE Alu -17 295 1 1925 143 14 0 chr2 25379064 25379351 -227877232 + AluSx SINE Alu 1 291 -21 642 121 32 8 chr2 25379362 25379486 -227877097 + GA-rich Low_complexity Low_complexity 2 128 0 1687 140 33 29 chr2 25379498 25379805 -227876778 + AluJb SINE Alu 1 308 -4 621 133 10 0 chr2 25380406 25380504 -227876079 + AluJb SINE Alu 200 298 -14 236 208 0 0 chr2 25380816 25380864 -227875719 + L1ME4a LINE L1 6062 6109 -12 243 0 0 0 chr2 25380922 25380949 -227875634 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 981 85 23 0 chr2 25380949 25381078 -227875505 - AluSc SINE Alu -177 132 1 286 262 60 27 chr2 25381137 25381286 -227875297 - L1M4 LINE L1 -1218 4928 4775 27 0 0 0 chr2 25381303 25381330 -227875253 + AT_rich Low_complexity Low_complexity 1 27 0 291 167 36 83 chr2 25381830 25381914 -227874669 - U14 snRNA snRNA -7 80 1 2165 99 20 7 chr2 25381921 25382215 -227874368 - AluSx SINE Alu -14 298 1 519 283 94 50 chr2 25382251 25382855 -227873728 - L1M4 LINE L1 -1430 4716 4086 2073 108 34 7 chr2 25382897 25383193 -227873390 - AluSx SINE Alu -8 304 1 297 211 0 0 chr2 25383316 25383373 -227873210 - L2 LINE L2 -7 3265 3209 264 261 68 11 chr2 25383416 25383504 -227873079 + MIR SINE MIR 18 110 -98 1433 136 5 5 chr2 25385203 25385423 -227871160 + AluSq SINE Alu 70 289 -24 207 0 0 0 chr2 25385426 25385449 -227871134 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 254 111 0 0 chr2 25385449 25385485 -227871098 - Alu SINE Alu -271 37 2 181 276 171 0 chr2 25385495 25385571 -227871012 + L2 LINE L2 3225 3313 0 2364 87 0 10 chr2 25385714 25386023 -227870560 - AluSg SINE Alu -4 306 1 620 265 70 0 chr2 25386070 25386255 -227870328 - MIR SINE MIR -43 219 22 2264 71 0 18 chr2 25386843 25387124 -227869459 + AluSc SINE Alu 1 276 -33 187 27 27 54 chr2 25387124 25387161 -227869422 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1915 125 53 4 chr2 25387547 25387828 -227868755 - AluSx SINE Alu -17 295 1 188 278 37 0 chr2 25388323 25388377 -227868206 - MIR SINE MIR -77 131 76 394 269 10 0 chr2 25390135 25390239 -227866344 + MIR3 SINE MIR 81 185 -23 196 274 0 0 chr2 25390338 25390389 -227866194 + MIR SINE MIR 100 150 -112 2359 84 7 10 chr2 25390720 25391019 -227865564 + AluSp SINE Alu 1 298 -15 4392 159 17 77 chr2 25391026 25391255 -227865328 + L1MB3 LINE L1 5135 5376 -807 2085 150 0 7 chr2 25391255 25391562 -227865021 + 7SLRNA srpRNA srpRNA 5 309 -11 4392 159 17 77 chr2 25391562 25391697 -227864886 + L1MB3 LINE L1 5376 5517 -666 2105 121 0 0 chr2 25391697 25391979 -227864604 + AluSx SINE Alu 1 282 -30 4392 159 17 77 chr2 25391979 25392335 -227864248 + L1MB3 LINE L1 5517 5776 -407 1740 123 108 0 chr2 25392335 25392604 -227863979 - AluSx SINE Alu -14 298 1 4392 159 17 77 chr2 25392604 25392931 -227863652 + L1MB3 LINE L1 5776 6121 -62 1429 79 11 5 chr2 25392933 25393122 -227863461 + AluSp SINE Alu 120 309 -4 2344 81 3 17 chr2 25393132 25393430 -227863153 + AluSg SINE Alu 1 294 -16 225 140 0 40 chr2 25393430 25393473 -227863110 + L1MB4 LINE L1 6132 6174 -6 2409 70 0 3 chr2 25393859 25394159 -227862424 + AluY SINE Alu 1 299 -12 1965 116 46 0 chr2 25394348 25394633 -227861950 - AluSx SINE Alu -14 298 1 2385 85 0 7 chr2 25394710 25395016 -227861567 - AluSx SINE Alu -8 304 1 365 226 49 0 chr2 25395092 25395194 -227861389 + L1ME4a LINE L1 5977 6083 -38 23 0 0 0 chr2 25395299 25395322 -227861261 + AT_rich Low_complexity Low_complexity 1 23 0 716 183 109 30 chr2 25395466 25395668 -227860915 + L1ME2 LINE L1 5938 6155 -9 2266 78 3 50 chr2 25396139 25396460 -227860123 - AluSx SINE Alu -6 306 1 654 261 88 9 chr2 25396695 25396921 -227859662 + MIR SINE MIR 13 256 -6 1744 164 0 33 chr2 25398407 25398711 -227857872 - AluJo SINE Alu -18 294 1 943 172 92 6 chr2 25400250 25400424 -227856159 + MER3 DNA MER1_type 21 209 0 283 303 34 46 chr2 25400593 25400641 -227855942 - L1MC4a LINE L1 -1884 5924 5877 1864 89 7 4 chr2 25400641 25400910 -227855673 - AluY SINE Alu 0 311 42 283 303 34 46 chr2 25400910 25401036 -227855547 - L1MC4a LINE L1 -1931 5877 5752 843 99 7 84 chr2 25401056 25401198 -227855385 - FLAM_C SINE Alu -2 131 1 2350 81 0 0 chr2 25401836 25402146 -227854437 - AluY SINE Alu 0 311 2 2103 69 94 0 chr2 25402149 25402426 -227854157 - AluSx SINE Alu -9 303 1 2365 147 21 95 chr2 25402618 25402922 -227853661 - MER66B LTR ERV1 0 486 236 2202 82 0 3 chr2 25402922 25403215 -227853368 - AluY SINE Alu -19 292 1 2365 147 21 95 chr2 25403215 25403435 -227853148 - MER66B LTR ERV1 -250 236 1 2104 113 0 3 chr2 25403477 25403777 -227852806 - AluSx SINE Alu -9 303 5 2334 57 0 0 chr2 25404174 25404478 -227852105 - AluY SINE Alu 0 304 1 2265 94 0 0 chr2 25404478 25404777 -227851806 - AluSg SINE Alu -11 299 1 1912 162 0 3 chr2 25405490 25405798 -227850785 - AluJb SINE Alu -4 308 2 423 276 71 34 chr2 25406098 25406337 -227850246 + L1ME4a LINE L1 5595 5842 -279 182 274 263 11 chr2 25406436 25406531 -227850052 - MIR SINE MIR -71 137 19 1867 132 35 0 chr2 25406578 25406865 -227849718 - AluJb SINE Alu -15 297 1 232 338 100 38 chr2 25406976 25407316 -227849267 + L2 LINE L2 2934 3294 -19 2083 100 11 0 chr2 25407501 25407782 -227848801 + AluSx SINE Alu 1 284 -28 2137 117 0 0 chr2 25408224 25408533 -227848050 - AluSq SINE Alu -4 309 1 1558 176 30 0 chr2 25409016 25409312 -227847271 + AluJb SINE Alu 3 307 -5 496 253 28 45 chr2 25409475 25409653 -227846930 - L1MC4 LINE L1 -4 8038 7864 1407 119 0 0 chr2 25409700 25409894 -227846689 + AluSq SINE Alu 11 204 -109 303 238 36 12 chr2 25409895 25409979 -227846604 + L1MC4 LINE L1 6624 6709 -1333 930 138 0 0 chr2 25409987 25410117 -227846466 - FLAM_C SINE Alu -3 130 1 373 228 79 9 chr2 25410121 25410235 -227846348 - L1MC4 LINE L1 -181 7861 7740 705 240 60 56 chr2 25410248 25410481 -227846102 + MER119 DNA MER1_type 11 244 -339 2109 82 0 4 chr2 25410485 25410792 -227845791 + AluY SINE Alu 1 306 0 225 261 0 0 chr2 25410793 25410839 -227845744 + MER119 DNA MER1_type 537 582 -1 4703 214 139 56 chr2 25410839 25411114 -227845469 - L1MC4a LINE L1 -154 7654 7403 1947 136 0 7 chr2 25411114 25411408 -227845175 + AluSx SINE Alu 1 292 -20 4703 214 139 56 chr2 25411408 25411897 -227844686 - L1MC4a LINE L1 -405 7403 6956 1822 106 50 20 chr2 25411897 25412199 -227844384 - AluSx SINE Alu -1 311 1 4703 214 139 56 chr2 25412199 25413355 -227843228 - L1MC4a LINE L1 -852 6956 5573 715 180 0 11 chr2 25413493 25413729 -227842854 + AluJo SINE Alu 2 286 -26 872 150 0 0 chr2 25413806 25413939 -227842644 - FLAM_C SINE Alu 0 133 1 367 221 195 21 chr2 25413940 25414130 -227842453 - L1MC5 LINE L1 -51 7910 7688 2769 208 40 32 chr2 25414159 25414631 -227841952 + MLT1E3 LTR MaLR 1 468 -156 2128 106 3 0 chr2 25414631 25414923 -227841660 - AluSx SINE Alu -19 293 1 1676 163 28 0 chr2 25414926 25415215 -227841368 - AluJo SINE Alu -15 297 1 2769 208 40 32 chr2 25415215 25415357 -227841226 + MLT1E3 LTR MaLR 469 624 0 1693 206 0 0 chr2 25415510 25415820 -227840763 + AluSx SINE Alu 1 310 -2 202 111 0 44 chr2 25415825 25415870 -227840713 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 246 295 0 11 chr2 25415870 25415965 -227840618 + L1ME LINE L1 91 184 -5886 1343 238 92 37 chr2 25416128 25416186 -227840397 + MLT1G1 LTR MaLR 1 54 -541 1715 132 97 3 chr2 25416186 25416496 -227840087 - L1MB3 LINE L1 0 6183 5845 1343 238 92 37 chr2 25416496 25416819 -227839764 + MLT1G1 LTR MaLR 54 403 -192 241 323 86 0 chr2 25417010 25417103 -227839480 + L2 LINE L2 2880 2980 -333 329 193 34 0 chr2 25417224 25417312 -227839271 + GA-rich Low_complexity Low_complexity 5 95 0 241 305 133 29 chr2 25417312 25417417 -227839166 + L3 LINE CR1 586 701 -876 1526 188 14 0 chr2 25417418 25417710 -227838873 + AluJb SINE Alu 1 296 -16 1285 203 11 8 chr2 25417747 25418013 -227838570 - AluJo SINE Alu -11 301 35 2151 125 0 0 chr2 25418056 25418368 -227838215 - AluSx SINE Alu 0 312 1 1297 244 35 20 chr2 25418481 25418801 -227837782 - L1ME LINE L1 -507 5663 5334 1758 133 31 7 chr2 25418801 25419087 -227837496 + AluJo SINE Alu 6 298 -14 1297 244 35 20 chr2 25419087 25419168 -227837415 - L1ME LINE L1 -836 5334 5256 1496 234 84 24 chr2 25419186 25419656 -227836927 + L1ME3A LINE L1 5671 6165 -5 312 183 14 28 chr2 25420768 25420839 -227835744 - MER116 DNA Mariner -3 77 8 493 383 24 0 chr2 25421181 25421348 -227835235 + L2 LINE L2 3102 3272 0 1127 148 31 45 chr2 25421534 25421757 -227834826 + AluJo SINE Alu 1 220 -92 372 94 0 0 chr2 25421757 25421810 -227834773 + AluJo SINE Alu 86 138 -164 1294 169 20 128 chr2 25421810 25422153 -227834430 + AluYb8 SINE Alu 3 308 0 835 211 0 6 chr2 25422161 25422327 -227834256 + AluJo SINE Alu 137 301 -1 246 319 69 53 chr2 25422456 25422644 -227833939 - L2 LINE L2 -796 2518 2328 1184 124 0 6 chr2 25422645 25422814 -227833769 + THE1C LTR MaLR 1 168 -207 19758 77 20 24 chr2 25422817 25425455 -227831128 + HERVL LTR ERVL 2697 5325 -329 7357 121 10 6 chr2 25425455 25426491 -227830092 + THE1C-int LTR MaLR 541 1580 0 2119 115 50 21 chr2 25426491 25426830 -227829753 + THE1C LTR MaLR 1 349 -26 1426 173 111 7 chr2 25426832 25427103 -227829480 + LTR28 LTR ERV1 1 299 -721 853 85 0 0 chr2 25427103 25427209 -227829374 + MER61-int LTR ERV1 3755 3860 -1357 498 255 137 54 chr2 25427209 25427400 -227829183 + L1MC4a LINE L1 4285 4459 -1687 2175 121 0 3 chr2 25427400 25427713 -227828870 + AluSx SINE Alu 1 312 0 498 255 137 54 chr2 25427713 25427724 -227828859 + L1MC4a LINE L1 4459 4468 -1678 1786 164 0 3 chr2 25427724 25428016 -227828567 + AluJb SINE Alu 6 296 -16 498 255 137 54 chr2 25428016 25428235 -227828348 + L1MC4a LINE L1 4468 4742 -1404 293 221 129 49 chr2 25428909 25429072 -227827511 + L1MC4a LINE L1 5722 5897 -1911 1901 113 14 10 chr2 25429600 25429892 -227826691 + AluSg SINE Alu 18 310 0 227 98 0 59 chr2 25429922 25429973 -227826610 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 2201 92 7 7 chr2 25430005 25430308 -227826275 - AluSx SINE Alu -9 303 1 1931 122 18 0 chr2 25430645 25430974 -227825609 - AluSx SINE Alu 0 334 1 28 0 0 0 chr2 25431173 25431201 -227825382 + AT_rich Low_complexity Low_complexity 1 28 0 1819 100 75 0 chr2 25432067 25432346 -227824237 - AluSx SINE Alu -12 300 1 2257 105 0 0 chr2 25432555 25432859 -227823724 + AluSx SINE Alu 1 304 -8 186 103 0 0 chr2 25432994 25433023 -227823560 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 473 174 105 0 chr2 25433129 25433215 -227823368 + MER58A DNA MER1_type 13 107 0 1221 185 137 0 chr2 25433233 25433503 -227823080 - AluSx SINE Alu -1 311 5 1855 128 14 0 chr2 25433550 25433852 -227822731 + AluSx SINE Alu 1 306 0 668 176 120 44 chr2 25433889 25433992 -227822591 + MER20B DNA MER1_type 515 609 -174 2242 106 0 0 chr2 25433992 25434304 -227822279 - AluSx SINE Alu 0 312 1 668 176 120 44 chr2 25434304 25434450 -227822133 + MER20B DNA MER1_type 609 783 0 2199 115 0 0 chr2 25434470 25434775 -227821808 - AluSx SINE Alu -7 305 1 206 378 0 0 chr2 25435320 25435402 -227821181 + CT-rich Low_complexity Low_complexity 2 83 0 1909 134 0 10 chr2 25436502 25436801 -227819782 - AluSx SINE Alu -16 296 1 2280 84 0 7 chr2 25437440 25437739 -227818844 - AluSx SINE Alu -11 301 5 2067 123 0 0 chr2 25438374 25438666 -227817917 + AluSx SINE Alu 1 292 -20 754 286 100 4 chr2 25438677 25438936 -227817647 - MLT1K LTR MaLR -140 448 165 594 350 138 15 chr2 25439233 25439388 -227817195 - L2 LINE L2 -4 3268 3133 1828 122 11 17 chr2 25439388 25439523 -227817060 + AluJo SINE Alu 1 135 -177 2751 10 0 3 chr2 25439523 25439834 -227816749 + AluYb8 SINE Alu 1 310 -8 1828 122 11 17 chr2 25439834 25439985 -227816598 + AluJo SINE Alu 135 285 -27 222 37 0 0 chr2 25439985 25440012 -227816571 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 594 350 138 15 chr2 25440012 25440256 -227816327 - L2 LINE L2 -139 3133 2920 1858 176 11 37 chr2 25440256 25440527 -227816056 - MER7A DNA MER2_type -2696 342 83 2447 56 0 3 chr2 25440527 25440832 -227815751 + AluY SINE Alu 1 304 -7 1858 176 11 37 chr2 25440832 25440913 -227815670 - MER7A DNA MER2_type -2955 83 1 594 350 138 15 chr2 25440913 25441168 -227815415 - L2 LINE L2 -352 2920 2588 29 0 0 0 chr2 25441304 25441333 -227815250 + AT_rich Low_complexity Low_complexity 1 29 0 1883 145 3 10 chr2 25441333 25441629 -227814954 + AluSx SINE Alu 1 294 -18 1000 69 8 0 chr2 25441635 25441766 -227814817 - L1MA2 LINE L1 0 6304 6173 2076 82 0 56 chr2 25441789 25442092 -227814491 - AluSq SINE Alu -27 286 1 663 289 52 41 chr2 25442102 25442469 -227814114 + L1MC4 LINE L1 7298 7668 -374 348 115 19 0 chr2 25442652 25442704 -227813879 - AluSp/q SINE Alu -71 232 180 1058 161 11 0 chr2 25442748 25442928 -227813655 - AluSx SINE Alu -121 191 10 209 171 98 0 chr2 25442973 25443014 -227813569 + L2 LINE L2 2699 2743 -571 1214 154 168 62 chr2 25443019 25443426 -227813157 + Tigger5 DNA MER2_type 5 2323 0 397 289 66 0 chr2 25443818 25443939 -227812644 + L2 LINE L2 3144 3272 0 2154 108 0 0 chr2 25444006 25444301 -227812282 - AluSx SINE Alu -15 297 3 575 267 182 27 chr2 25444493 25444643 -227811940 + MIR SINE MIR 2 127 -135 216 0 0 0 chr2 25444643 25444667 -227811916 + (TA)n Simple_repeat Simple_repeat 2 25 0 2078 127 0 0 chr2 25444667 25444966 -227811617 - AluSx SINE Alu -13 299 1 575 267 182 27 chr2 25444966 25445039 -227811544 + MIR SINE MIR 126 261 -1 805 310 32 29 chr2 25445043 25445353 -227811230 - L3 LINE CR1 -428 1149 839 2084 119 0 0 chr2 25445362 25445655 -227810928 - AluSx SINE Alu -19 293 1 278 307 235 18 chr2 25445656 25445822 -227810761 - L3 LINE CR1 -916 661 460 369 143 39 39 chr2 25445877 25445954 -227810629 + L1MC/D LINE L1 5708 5784 -2024 264 352 16 0 chr2 25446348 25446476 -227810107 + LTR67 LTR ERVL 428 557 0 1372 185 10 40 chr2 25446538 25446835 -227809748 + AluJb SINE Alu 1 288 -24 2031 104 19 10 chr2 25446845 25447152 -227809431 + AluSg SINE Alu 1 310 0 461 288 95 18 chr2 25447294 25447516 -227809067 - HAL1 LINE L1 -1499 1008 770 * 628 238 65 65 chr2 25447509 25447803 -227808780 - HAL1 LINE L1 -2151 356 63 225 308 107 58 chr2 25447931 25448155 -227808428 - L3 LINE CR1 -1148 429 195 25 31 0 0 chr2 25448275 25448307 -227808276 + AT_rich Low_complexity Low_complexity 1 32 0 2186 92 7 3 chr2 25448779 25449085 -227807498 - AluSq SINE Alu -6 307 1 380 300 36 7 chr2 25449086 25449226 -227807357 + LTR67 LTR ERVL 414 557 0 365 319 93 51 chr2 25449899 25450062 -227806521 + HERVL LTR ERVL 826 981 -4783 303 28 0 0 chr2 25450062 25450098 -227806485 + (CA)n Simple_repeat Simple_repeat 2 37 0 365 319 93 51 chr2 25450098 25450288 -227806295 + HERVL LTR ERVL 981 1194 -4570 1883 162 3 10 chr2 25450696 25450715 -227805868 - AluJb SINE Alu -7 305 287 381 22 0 0 chr2 25450715 25450761 -227805822 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 1883 162 3 10 chr2 25450761 25451044 -227805539 - AluJb SINE Alu -25 287 5 1732 314 89 65 chr2 25451072 25451745 -227804838 + HERVL LTR ERVL 2151 2807 -2847 2362 85 10 0 chr2 25451745 25452039 -227804544 + AluSq SINE Alu 1 297 -16 1732 314 89 65 chr2 25452039 25452170 -227804413 + HERVL LTR ERVL 2807 2933 -2721 2184 104 17 17 chr2 25452170 25452469 -227804114 + AluSx SINE Alu 1 299 -13 1732 314 89 65 chr2 25452469 25452507 -227804076 + HERVL LTR ERVL 2933 2969 -2685 1847 145 24 10 chr2 25452507 25452803 -227803780 - AluJb SINE Alu -12 300 1 450 0 0 0 chr2 25452803 25452853 -227803730 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1894 142 8 4 chr2 25452858 25453125 -227803458 - AluSx SINE Alu -44 268 1 1732 314 89 65 chr2 25453125 25453724 -227802859 + HERVL LTR ERVL 2972 3600 -2054 370 336 84 9 chr2 25453732 25453958 -227802625 + HERVL LTR ERVL 3731 3973 -1791 2089 138 10 0 chr2 25454033 25454338 -227802245 + AluSx SINE Alu 1 308 -4 2359 112 7 0 chr2 25454587 25454892 -227801691 + AluSx SINE Alu 1 307 -5 1967 152 0 7 chr2 25455567 25455869 -227800714 + AluJb SINE Alu 7 306 -6 258 283 66 9 chr2 25456320 25456426 -227800157 - MER5A DNA MER1_type -75 114 3 2331 99 0 0 chr2 25456604 25456922 -227799661 - AluSx SINE Alu 0 312 1 240 172 0 109 chr2 25457030 25457094 -227799489 - L2 LINE L2 -5 3308 3252 208 276 69 9 chr2 25457728 25457844 -227798739 + L2 LINE L2 1892 2014 -1300 252 323 81 8 chr2 25458144 25458268 -227798315 + L2 LINE L2 3179 3311 -2 1737 168 0 72 chr2 25458875 25459208 -227797375 - AluJb SINE Alu -3 309 1 265 281 11 34 chr2 25460213 25460302 -227796281 + MIR SINE MIR 36 122 -86 633 249 107 30 chr2 25461122 25461355 -227795228 + MIR SINE MIR 1 251 -11 2300 104 0 0 chr2 25461557 25461893 -227794690 - AluSg SINE Alu 0 336 1 353 238 140 14 chr2 25462397 25462540 -227794043 - MER53 DNA DNA -2 187 27 1696 98 0 0 chr2 25462540 25462754 -227793829 - AluSg/x SINE Alu -17 295 82 1559 129 110 36 chr2 25462802 25463111 -227793472 - MER21A LTR ERV1 -6 925 594 1369 173 60 11 chr2 25463267 25463643 -227792940 + MER21A LTR ERV1 1 418 -445 2529 90 0 0 chr2 25463901 25464211 -227792372 - AluSx SINE Alu -2 310 1 2357 80 7 3 chr2 25465112 25465412 -227791171 + AluSx SINE Alu 12 312 0 24 32 0 0 chr2 25466129 25466160 -227790423 + GC_rich Low_complexity Low_complexity 1 31 0 209 227 34 23 chr2 25466301 25466389 -227790194 + C-rich Low_complexity Low_complexity 3 91 0 29 0 0 0 chr2 25466496 25466525 -227790058 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 25468269 25468290 -227788293 + AT_rich Low_complexity Low_complexity 1 21 0 2393 87 0 3 chr2 25469660 25469958 -227786625 + AluSq SINE Alu 1 297 -16 2337 98 3 0 chr2 25470264 25470561 -227786022 + AluSx SINE Alu 1 298 -14 2647 27 7 0 chr2 25470667 25470962 -227785621 - AluY SINE Alu -14 297 1 342 294 37 0 chr2 25471477 25471586 -227784997 + L1MC4 LINE L1 7786 7898 -144 827 252 41 35 chr2 25471886 25472101 -227784482 - MLT1A2 LTR MaLR -16 402 190 1945 145 19 13 chr2 25472101 25472411 -227784172 - AluJo SINE Alu 0 312 1 827 252 41 35 chr2 25472411 25472441 -227784142 - MLT1A2 LTR MaLR -228 190 162 718 80 0 0 chr2 25472441 25472541 -227784042 - HY3 scRNA scRNA -1 100 1 827 252 41 35 chr2 25472541 25472662 -227783921 - MLT1A2 LTR MaLR -256 162 34 2103 103 43 7 chr2 25472662 25472943 -227783640 + AluSx SINE Alu 1 291 -21 484 156 31 0 chr2 25472972 25473068 -227783515 + L1MA9 LINE L1 5937 6035 -277 2160 100 7 17 chr2 25473218 25473519 -227783064 + AluSp SINE Alu 1 298 -15 2151 128 7 0 chr2 25474300 25474590 -227781993 - AluSx SINE Alu -20 292 1 783 209 24 80 chr2 25475164 25475413 -227781170 - MLT1D LTR MaLR -270 235 1 267 395 15 24 chr2 25475413 25475618 -227780965 - MIR SINE MIR -59 203 1 * 309 302 0 63 chr2 25475618 25475727 -227780856 - MER5A DNA MER1_type -23 166 66 1995 139 17 3 chr2 25475727 25476028 -227780555 - AluJb SINE Alu -7 305 1 434 262 66 87 chr2 25476910 25477093 -227779490 + MIR SINE MIR 2 180 -82 2270 82 58 0 chr2 25477234 25477528 -227779055 - AluY SINE Alu 0 311 1 209 73 0 49 chr2 25477666 25477707 -227778876 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2280 153 62 46 chr2 25478931 25479428 -227777155 - MLT1D LTR MaLR 0 505 1 472 305 51 30 chr2 25479661 25480213 -227776370 + L1MC5 LINE L1 7222 7690 -271 1251 149 84 8 chr2 25481051 25481312 -227775271 - L1MB5 LINE L1 0 6174 5894 2275 174 24 40 chr2 25481313 25481907 -227774676 - L1MB5 LINE L1 -439 5741 5173 2102 121 7 23 chr2 25481907 25482212 -227774371 - AluSx SINE Alu -10 302 3 2275 174 24 40 chr2 25482212 25482431 -227774152 - L1MB5 LINE L1 -1007 5173 4952 2148 117 33 0 chr2 25482799 25483099 -227773484 + AluSx SINE Alu 3 312 0 183 184 0 0 chr2 25483298 25483336 -227773247 + GA-rich Low_complexity Low_complexity 3 40 0 285 284 94 16 chr2 25483365 25483492 -227773091 - MER5B DNA MER1_type 0 178 42 218 361 93 10 chr2 25483529 25483734 -227772849 + L3 LINE CR1 1259 1480 -97 205 200 22 0 chr2 25483943 25483988 -227772595 + CT-rich Low_complexity Low_complexity 5 50 0 2111 125 0 30 chr2 25484047 25484188 -227772395 + AluSx SINE Alu 1 145 -167 2128 115 52 0 chr2 25484188 25484474 -227772109 + AluSx SINE Alu 1 301 -11 2111 125 0 30 chr2 25484474 25484635 -227771948 + AluSx SINE Alu 145 294 -18 216 0 0 0 chr2 25485521 25485545 -227771038 + (A)n Simple_repeat Simple_repeat 1 24 0 337 259 127 19 chr2 25485780 25485938 -227770645 - HAL1 LINE L1 -386 2121 1947 1234 146 0 11 chr2 25485941 25486126 -227770457 - AluJ SINE Alu -22 290 108 731 108 0 0 chr2 25486135 25486246 -227770337 - Tigger5 DNA MER2_type -144 2179 2069 1900 118 4 8 chr2 25486246 25486539 -227770044 + AluSx SINE Alu 24 315 0 650 124 152 0 chr2 25486540 25486645 -227769938 - AluJ SINE Alu -189 123 3 580 241 200 5 chr2 25486647 25486867 -227769716 - HAL1 LINE L1 -548 1959 1697 320 335 29 29 chr2 25486868 25486961 -227769622 - HAL1 LINE L1 -2325 182 87 2586 59 3 3 chr2 25486961 25487266 -227769317 - AluY SINE Alu -6 305 1 320 335 29 29 chr2 25487266 25487345 -227769238 - HAL1 LINE L1 -2419 88 10 205 362 0 57 chr2 25487347 25487488 -227769095 - L2 LINE L2 -594 2720 2588 2279 124 10 0 chr2 25488042 25488348 -227768235 - AluSx SINE Alu -3 309 1 22 0 0 0 chr2 25488349 25488371 -227768212 + AT_rich Low_complexity Low_complexity 1 22 0 2420 97 6 0 chr2 25488533 25488844 -227767739 - AluSp SINE Alu 0 313 1 2427 92 0 0 chr2 25489785 25490080 -227766503 + AluSc SINE Alu 1 295 -14 2361 93 0 13 chr2 25490137 25490450 -227766133 + AluSg1 SINE Alu 1 309 0 395 311 42 42 chr2 25490699 25490866 -227765717 + L1ME LINE L1 5657 5823 -298 2480 64 0 55 chr2 25490872 25491200 -227765383 + AluY SINE Alu 1 310 -1 849 235 37 89 chr2 25491747 25491831 -227764752 - L1M4 LINE L1 -2793 3353 3266 2352 111 0 9 chr2 25491831 25492147 -227764436 - AluSp SINE Alu 0 313 1 849 235 37 89 chr2 25492147 25492387 -227764196 - L1M4 LINE L1 -2880 3266 3015 519 205 137 0 chr2 25492387 25492504 -227764079 - FLAM_A SINE Alu 0 133 1 849 235 37 89 chr2 25492504 25492865 -227763718 - L1M4 LINE L1 -3131 3015 2727 1038 129 14 0 chr2 25492966 25493113 -227763470 + AluSg/x SINE Alu 142 290 -20 2275 100 3 10 chr2 25493894 25494194 -227762389 - AluSp SINE Alu -15 298 1 1652 143 18 73 chr2 25494346 25494437 -227762146 - L1MA9 LINE L1 -277 6035 5941 2190 102 0 3 chr2 25494437 25494763 -227761820 - AluSx SINE Alu 0 325 1 1652 143 18 73 chr2 25494763 25495013 -227761570 - L1MA9 LINE L1 -371 5941 5712 322 200 133 0 chr2 25495046 25495121 -227761462 + L1MA9 LINE L1 6159 6243 -69 648 118 18 0 chr2 25495122 25495232 -227761351 + FLAM_C SINE Alu 32 143 0 312 128 7 0 chr2 25495232 25495289 -227761294 + Alu SINE Alu 1 45 -263 2230 94 13 7 chr2 25495462 25495761 -227760822 + AluY SINE Alu 1 301 -10 2276 103 10 13 chr2 25496080 25496435 -227760148 + AluSq SINE Alu 1 354 0 1528 266 90 53 chr2 25496461 25497519 -227759064 + L2 LINE L2 2184 3289 -24 2209 129 0 3 chr2 25497519 25497821 -227758762 - AluSx SINE Alu -11 301 1 1528 266 90 53 chr2 25497821 25497843 -227758740 + L2 LINE L2 3289 3309 -4 1791 231 54 91 chr2 25498079 25498612 -227757971 + LTR8 LTR ERV1 17 519 -172 2191 105 7 0 chr2 25498612 25498906 -227757677 + AluSq SINE Alu 6 301 -12 1791 231 54 91 chr2 25498906 25499073 -227757510 + LTR8 LTR ERV1 519 691 0 229 88 0 0 chr2 25499175 25499209 -227757374 - MER3 DNA MER1_type -160 49 16 431 208 0 0 chr2 25499240 25499336 -227757247 - L1ME2 LINE L1 -208 5956 5861 1867 149 0 50 chr2 25499442 25499765 -227756818 - AluJo SINE Alu -1 311 5 216 350 68 10 chr2 25499885 25499988 -227756595 - L2 LINE L2 -695 2619 2511 239 324 14 0 chr2 25500704 25500778 -227755805 - L2 LINE L2 -210 3062 2988 413 255 0 0 chr2 25501090 25501188 -227755395 + L1ME1 LINE L1 6066 6163 -3 264 139 278 0 chr2 25501259 25501331 -227755252 - MIR SINE MIR -56 152 61 1978 111 69 7 chr2 25501376 25501665 -227754918 - AluSx SINE Alu -5 307 1 465 213 132 46 chr2 25501963 25501998 -227754585 + MER53 DNA DNA 1 32 -157 1826 130 43 14 chr2 25501998 25502275 -227754308 + AluJo SINE Alu 1 285 -27 208 0 0 0 chr2 25502275 25502298 -227754285 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 465 213 132 46 chr2 25502298 25502435 -227754148 + MER53 DNA DNA 32 189 0 314 203 7 61 chr2 25502442 25502590 -227753993 + A-rich Low_complexity Low_complexity 2 141 0 491 336 31 14 chr2 25503295 25503597 -227752986 + L1ME4a LINE L1 5574 5883 -238 229 186 34 0 chr2 25503652 25503711 -227752872 - L1MD2 LINE L1 0 6359 6299 1263 148 10 5 chr2 25503716 25503925 -227752658 + AluSc SINE Alu 1 210 -99 1166 115 11 17 chr2 25504344 25504538 -227752045 + AluSp SINE Alu 114 306 0 2823 139 40 82 chr2 25504543 25504680 -227751903 - L1MB8 LINE L1 -16 6162 6021 621 152 9 0 chr2 25504680 25504785 -227751798 + L1PB2 LINE L1 6040 6145 -6 1938 119 13 32 chr2 25504785 25505117 -227751466 + AluSx SINE Alu 1 312 0 2823 139 40 82 chr2 25505117 25505344 -227751239 - L1MB8 LINE L1 -156 6022 5787 2411 103 3 0 chr2 25505344 25505656 -227750927 - AluSp SINE Alu 0 313 1 2823 139 40 82 chr2 25505656 25505944 -227750639 - L1MB8 LINE L1 -391 5787 5536 344 247 11 44 chr2 25505966 25506119 -227750464 - MER20B DNA MER1_type -41 742 594 2109 128 0 17 chr2 25506119 25506417 -227750166 - AluSx SINE Alu -18 294 2 344 247 11 44 chr2 25506417 25506445 -227750138 - MER20B DNA MER1_type -189 594 567 297 183 0 0 chr2 25506677 25506737 -227749846 + (CA)n Simple_repeat Simple_repeat 1 60 0 448 227 82 67 chr2 25507913 25508107 -227748476 - MIR3 SINE MIR -6 202 6 1308 121 0 0 chr2 25508108 25508281 -227748302 - AluJb SINE Alu -15 297 125 180 111 0 0 chr2 25508288 25508315 -227748268 + (TA)n Simple_repeat Simple_repeat 2 28 0 2246 192 156 34 chr2 25508907 25509606 -227746977 - LTR48 LTR ERV1 0 787 4 4126 80 9 28 chr2 25509764 25509942 -227746641 - MER41A LTR ERV1 0 554 374 2394 95 0 0 chr2 25509942 25510238 -227746345 - AluSg1 SINE Alu -13 296 1 4126 80 9 28 chr2 25510238 25510624 -227745959 - MER41A LTR ERV1 -180 374 1 222 231 0 19 chr2 25510717 25510769 -227745814 - L2 LINE L2 -13 3300 3250 192 206 118 15 chr2 25511025 25511093 -227745490 - L3 LINE CR1 -308 1269 1195 220 324 95 14 chr2 25511410 25511620 -227744963 - L2 LINE L2 -1018 2296 2070 2281 99 3 26 chr2 25511637 25511950 -227744633 + AluSx SINE Alu 1 306 -6 310 242 167 30 chr2 25511990 25512122 -227744461 - L1ME LINE L1 -398 5723 5574 256 286 82 66 chr2 25512398 25512580 -227744003 + MIR3 SINE MIR 16 200 -8 377 183 144 10 chr2 25512774 25512878 -227743705 + L2 LINE L2 2571 2688 -626 2096 145 0 0 chr2 25512879 25513183 -227743400 + AluSx SINE Alu 1 304 -8 262 242 32 0 chr2 25513192 25513254 -227743329 + L2 LINE L2 2760 2823 -491 441 0 0 0 chr2 25513277 25513326 -227743257 + (CA)n Simple_repeat Simple_repeat 1 49 0 735 275 112 20 chr2 25513370 25513665 -227742918 + L2 LINE L2 2991 3312 -1 205 139 116 0 chr2 25513836 25513879 -227742704 + L2 LINE L2 3202 3249 -64 184 228 279 25 chr2 25514333 25514412 -227742171 - L2 LINE L2 -1 3312 3214 2539 83 0 0 chr2 25514416 25514728 -227741855 + AluSp SINE Alu 2 313 0 975 75 0 8 chr2 25514742 25514862 -227741721 + AluSq/x SINE Alu 21 139 -174 326 70 0 0 chr2 25514862 25514932 -227741651 + Alu SINE Alu 242 311 0 1578 139 68 24 chr2 25515130 25515485 -227741098 + AluJb SINE Alu 1 368 0 320 309 33 9 chr2 25515892 25516102 -227740481 + L1ME4a LINE L1 4369 4583 -1563 242 320 40 25 chr2 25516329 25516607 -227739976 + L1ME4a LINE L1 4735 5016 -1130 1185 130 0 0 chr2 25516790 25516959 -227739624 + AluSp SINE Alu 137 305 -8 2247 118 0 10 chr2 25516969 25517282 -227739301 + AluSx SINE Alu 1 310 -2 24 0 0 0 chr2 25517975 25517999 -227738584 + AT_rich Low_complexity Low_complexity 1 24 0 678 226 55 0 chr2 25518016 25518162 -227738421 - MIR SINE MIR -29 233 80 339 274 125 21 chr2 25519300 25519327 -227737256 + L1ME4a LINE L1 5806 5829 -292 2208 108 0 14 chr2 25519327 25519622 -227736961 - AluSg SINE Alu -19 291 1 339 274 125 21 chr2 25519622 25519875 -227736708 + L1ME4a LINE L1 5829 6115 -6 393 356 34 34 chr2 25520004 25520240 -227736343 + L2 LINE L2 3016 3251 -21 678 226 55 0 chr2 25521440 25521586 -227734997 + MIR SINE MIR 80 233 -29 24 0 0 0 chr2 25521603 25521627 -227734956 + AT_rich Low_complexity Low_complexity 1 24 0 2415 90 3 0 chr2 25522317 25522627 -227733956 - AluSq SINE Alu -2 311 1 555 276 150 52 chr2 25524683 25525009 -227731574 - L2 LINE L2 -5 3308 2951 318 315 19 19 chr2 25525728 25525836 -227730747 - MIR SINE MIR -147 115 8 254 159 0 0 chr2 25525851 25525895 -227730688 + MER5A DNA MER1_type 9 52 -137 705 225 12 65 chr2 25526042 25526211 -227730372 + MIR SINE MIR 14 173 -89 233 158 0 0 chr2 25526211 25526249 -227730334 - MER4A LTR ERV1 0 664 627 2342 98 0 13 chr2 25526255 25526571 -227730012 - AluSx SINE Alu 0 312 1 1678 114 6 81 chr2 25526572 25526916 -227729667 - MER4A LTR ERV1 -25 639 262 677 91 0 10 chr2 25526917 25527016 -227729567 - MER4A LTR ERV1 -566 98 1 257 250 0 16 chr2 25527016 25527080 -227729503 + MIR SINE MIR 170 232 -30 206 357 21 49 chr2 25527260 25527403 -227729180 - MIR SINE MIR -121 141 3 2185 136 0 0 chr2 25527496 25527797 -227728786 - AluSx SINE Alu -11 301 1 4111 140 23 65 chr2 25528047 25528625 -227727958 - L1MC1 LINE L1 -420 5913 5312 2230 133 0 0 chr2 25528625 25528925 -227727658 - AluSx SINE Alu -12 300 1 4111 140 23 65 chr2 25528925 25528970 -227727613 - L1MC1 LINE L1 -1021 5312 5267 2810 99 8 3 chr2 25528970 25529343 -227727240 - THE1C LTR MaLR 0 375 1 4111 140 23 65 chr2 25529343 25529515 -227727068 - L1MC1 LINE L1 -1066 5267 5187 2184 110 24 0 chr2 25529515 25529805 -227726778 - AluSx SINE Alu -15 297 1 4111 140 23 65 chr2 25529805 25530065 -227726518 - L1MC1 LINE L1 -1146 5187 4918 393 265 71 83 chr2 25530643 25530855 -227725728 - MIR SINE MIR -36 226 9 2332 89 0 3 chr2 25534109 25534400 -227722183 - AluSc SINE Alu -19 290 1 306 50 0 0 chr2 25534436 25534476 -227722107 + (CA)n Simple_repeat Simple_repeat 2 41 0 318 291 51 0 chr2 25534477 25534556 -227722027 - L1MC4 LINE L1 -1345 6697 6615 2076 85 31 4 chr2 25534599 25534859 -227721724 - AluSg SINE Alu -30 280 14 1982 166 3 13 chr2 25535245 25535552 -227721031 + AluJb SINE Alu 1 304 -8 2140 130 19 7 chr2 25536037 25536345 -227720238 + AluJb SINE Alu 1 312 0 767 277 50 85 chr2 25536613 25536812 -227719771 + L1ME4a LINE L1 5479 5683 -438 1951 170 0 3 chr2 25536812 25537123 -227719460 - AluJb SINE Alu -2 310 1 767 277 50 85 chr2 25537123 25537446 -227719137 + L1ME4a LINE L1 5683 5976 -145 2262 132 0 0 chr2 25537446 25537749 -227718834 + AluSx SINE Alu 1 303 -9 767 277 50 85 chr2 25537749 25537886 -227718697 + L1ME4a LINE L1 5976 6116 -5 2338 97 0 0 chr2 25538056 25538346 -227718237 - AluSg SINE Alu -20 290 1 193 362 141 22 chr2 25538372 25538684 -227717899 + L2 LINE L2 2550 2898 -416 234 0 0 0 chr2 25540864 25540890 -227715693 + (T)n Simple_repeat Simple_repeat 1 26 0 2310 102 0 3 chr2 25541953 25542247 -227714336 + AluSq SINE Alu 1 293 -20 2407 78 0 0 chr2 25542530 25542824 -227713759 - AluY SINE Alu -17 294 1 380 218 122 107 chr2 25543124 25543387 -227713196 - MLT1J LTR MaLR -38 473 167 1852 160 10 3 chr2 25543387 25543680 -227712903 - AluJb SINE Alu -17 295 1 380 218 122 107 chr2 25543680 25543847 -227712736 - MLT1J LTR MaLR -344 167 4 193 29 59 0 chr2 25543929 25543963 -227712620 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 264 374 11 26 chr2 25544167 25544357 -227712226 + L3 LINE CR1 1171 1357 -220 2106 105 80 23 chr2 25544372 25544724 -227711859 - THE1C LTR MaLR 0 375 4 244 277 12 36 chr2 25545217 25545300 -227711283 + L2 LINE L2 3223 3303 -10 323 188 14 29 chr2 25545416 25545485 -227711098 + MIR3 SINE MIR 126 193 -15 46 33 0 0 chr2 25545994 25546054 -227710529 + AT_rich Low_complexity Low_complexity 1 60 0 320 147 0 137 chr2 25546054 25546098 -227710485 - L1MB7 LINE L1 -41 6143 6117 1986 126 12 64 chr2 25546098 25546424 -227710159 + AluSx SINE Alu 1 309 -3 320 147 0 137 chr2 25546424 25546474 -227710109 - L1MB7 LINE L1 -67 6117 6062 444 308 77 0 chr2 25546722 25546878 -227709705 + MIR3 SINE MIR 16 183 -25 2245 126 7 0 chr2 25547174 25547483 -227709100 - AluSx SINE Alu -1 311 1 756 151 13 10 chr2 25547791 25548097 -227708486 + CT-rich Low_complexity Low_complexity 1 307 0 303 307 0 0 chr2 25548124 25548212 -227708371 - MIR SINE MIR -2 260 173 2208 108 40 0 chr2 25548510 25548807 -227707776 - AluSg SINE Alu -1 309 1 2186 113 0 0 chr2 25548873 25549181 -227707402 - AluSq SINE Alu 0 308 1 815 236 12 56 chr2 25549181 25549431 -227707152 - L1MA9 LINE L1 -362 5950 5712 610 159 9 18 chr2 25549540 25549653 -227706930 + FLAM_C SINE Alu 32 143 0 1296 108 48 0 chr2 25549663 25549849 -227706734 + AluY SINE Alu 1 195 -116 233 333 90 18 chr2 25550085 25550223 -227706360 - MIR SINE MIR -31 177 25 23 0 0 0 chr2 25550856 25550879 -227705704 + AT_rich Low_complexity Low_complexity 1 23 0 2048 132 14 0 chr2 25550977 25551264 -227705319 + AluSx SINE Alu 1 291 -21 2439 61 0 0 chr2 25551268 25551576 -227705007 + AluSc SINE Alu 1 308 0 2351 107 3 3 chr2 25551796 25552106 -227704477 - AluSx SINE Alu -2 310 1 2385 110 0 0 chr2 25552863 25553171 -227703412 - AluSx SINE Alu -4 308 1 910 273 105 19 chr2 25553428 25553838 -227702745 + L2 LINE L2 2867 3311 -2 2118 142 10 0 chr2 25553985 25554281 -227702302 + AluJb SINE Alu 1 299 -13 250 136 0 0 chr2 25554701 25554745 -227701838 - MER4-int LTR ERV1 -5437 1161 1118 495 0 0 0 chr2 25555182 25555237 -227701346 + (TG)n Simple_repeat Simple_repeat 1 55 0 2426 57 3 41 chr2 25555349 25555667 -227700916 + AluY SINE Alu 1 306 -5 1977 163 0 3 chr2 25555678 25555979 -227700604 + AluSx SINE Alu 1 300 -12 2279 51 51 0 chr2 25556570 25556846 -227699737 + AluY SINE Alu 1 290 -21 843 206 0 57 chr2 25557085 25557260 -227699323 - AluSg/x SINE Alu -14 298 134 2297 122 0 0 chr2 25557260 25557564 -227699019 - AluSx SINE Alu -8 304 1 2545 45 10 19 chr2 25558891 25559205 -227697378 + AluY SINE Alu 1 311 0 243 0 0 0 chr2 25559534 25559561 -227697022 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 881 92 8 0 chr2 25560097 25560216 -227696367 + AluY SINE Alu 176 295 -16 228 233 207 0 chr2 25560244 25560360 -227696223 + L1ME4a LINE L1 5978 6117 -4 2437 81 0 3 chr2 25560363 25560658 -227695925 + AluSq SINE Alu 1 294 -19 436 282 43 62 chr2 25561106 25561248 -227695335 + MIR SINE MIR 20 158 -104 2180 136 0 3 chr2 25561248 25561556 -227695027 + AluSx SINE Alu 2 308 -4 436 282 43 62 chr2 25561556 25561622 -227694961 + MIR SINE MIR 158 224 -38 1709 193 3 10 chr2 25562276 25562577 -227694006 + AluJo SINE Alu 1 299 -13 1654 171 44 14 chr2 25562712 25563074 -227693509 - L1MC1 LINE L1 0 6333 5961 196 178 44 0 chr2 25564391 25564436 -227692147 + L2 LINE L2 3220 3266 -6 300 303 23 45 chr2 25564477 25564609 -227691974 - L1ME3A LINE L1 -36 6134 6006 236 149 149 0 chr2 25564642 25564709 -227691874 - L1ME3A LINE L1 -232 5938 5862 2203 122 3 16 chr2 25564725 25565037 -227691546 + AluSq SINE Alu 1 308 -5 2121 107 4 4 chr2 25565259 25565540 -227691043 - AluSx SINE Alu -31 281 1 203 232 0 36 chr2 25565713 25565769 -227690814 + (TATG)n Simple_repeat Simple_repeat 3 56 0 256 93 0 23 chr2 25565868 25565911 -227690672 - L1ME3A LINE L1 -2071 5737 5696 343 306 208 0 chr2 25565914 25566087 -227690496 - L1ME3A LINE L1 -2165 5643 5435 2269 96 17 13 chr2 25566114 25566416 -227690167 + AluSx SINE Alu 1 303 -9 272 0 79 0 chr2 25566531 25566569 -227690014 + CT-rich Low_complexity Low_complexity 4 44 0 1951 109 62 7 chr2 25566695 25566971 -227689612 + AluSg SINE Alu 9 299 -11 276 328 16 55 chr2 25567052 25567180 -227689403 + MIR SINE MIR 60 182 -80 428 186 372 0 chr2 25567885 25568014 -227688569 - MER58B DNA MER1_type 0 341 165 663 208 8 8 chr2 25568018 25568148 -227688435 - FLAM_A SINE Alu -2 131 2 698 190 76 0 chr2 25568165 25568323 -227688260 + MLT1B LTR MaLR 7 176 -214 817 183 59 0 chr2 25568325 25568478 -227688105 + AluJb SINE Alu 137 298 -14 2443 39 0 14 chr2 25568485 25568810 -227687773 + AluY SINE Alu 5 325 0 684 167 18 11 chr2 25568849 25568998 -227687585 + MLT1C LTR MaLR 239 466 -1 189 0 0 0 chr2 25569027 25569048 -227687535 + (TTC)n Simple_repeat Simple_repeat 3 23 0 1236 89 0 6 chr2 25569209 25569366 -227687217 + AluJb SINE Alu 72 227 -85 3752 172 81 55 chr2 25569980 25570650 -227685933 - LTR13 LTR ERVK 0 954 252 2595 60 7 0 chr2 25570650 25570951 -227685632 - AluY SINE Alu -8 303 1 3752 172 81 55 chr2 25570951 25571210 -227685373 - LTR13 LTR ERVK -702 252 1 2122 135 0 3 chr2 25571265 25571562 -227685021 - AluJb SINE Alu -16 296 1 248 288 209 17 chr2 25571568 25571745 -227684838 - MIR SINE MIR -12 250 40 2499 69 0 0 chr2 25572017 25572308 -227684275 - AluSc SINE Alu -18 291 1 254 156 47 0 chr2 25572666 25572730 -227683853 + GA-rich Low_complexity Low_complexity 2 68 0 306 274 11 63 chr2 25573682 25573777 -227682806 - L1MC4 LINE L1 -1340 6702 6613 185 196 18 0 chr2 25573784 25573840 -227682743 + (TA)n Simple_repeat Simple_repeat 1 57 0 2230 122 3 0 chr2 25573893 25574196 -227682387 + AluSg SINE Alu 1 304 -6 2290 97 7 10 chr2 25574843 25575143 -227681440 + AluSg SINE Alu 1 299 -11 969 269 60 95 chr2 25575566 25576093 -227680490 - L2 LINE L2 -105 3208 2708 2185 105 0 7 chr2 25576093 25576400 -227680183 - AluSx SINE Alu 0 306 2 969 269 60 95 chr2 25576400 25576667 -227679916 - L2 LINE L2 -605 2708 2433 535 224 115 0 chr2 25576770 25576926 -227679657 + L1M4 LINE L1 5520 5693 -485 2172 115 0 3 chr2 25576928 25577214 -227679369 + AluSx SINE Alu 1 285 -27 297 0 0 0 chr2 25577226 25577259 -227679324 + (TG)n Simple_repeat Simple_repeat 2 34 0 2213 167 54 11 chr2 25577264 25577728 -227678855 + L1HS LINE L1 5639 6123 -61 2232 120 3 0 chr2 25577729 25578030 -227678553 - AluSx SINE Alu -10 302 1 515 299 145 43 chr2 25580052 25580377 -227676206 - L2 LINE L2 -5 3308 2951 294 315 19 19 chr2 25581096 25581204 -227675379 - MIR SINE MIR -147 115 8 237 159 0 0 chr2 25581219 25581263 -227675320 + MER5A DNA MER1_type 9 52 -137 642 231 12 65 chr2 25581410 25581579 -227675004 + MIR SINE MIR 14 173 -89 1690 111 5 126 chr2 25581579 25581623 -227674960 - MER4A LTR ERV1 0 664 616 2347 98 0 13 chr2 25581623 25581939 -227674644 - AluSx SINE Alu 0 312 1 1690 111 5 126 chr2 25581939 25582284 -227674299 - MER4A LTR ERV1 -48 616 262 682 91 0 10 chr2 25582285 25582384 -227674199 - MER4A LTR ERV1 -566 98 1 246 250 0 16 chr2 25582384 25582448 -227674135 + MIR SINE MIR 170 232 -30 2205 133 0 0 chr2 25582864 25583165 -227673418 - AluSx SINE Alu -11 301 1 4113 139 23 64 chr2 25583415 25583993 -227672590 - L1MC1 LINE L1 -420 5913 5313 2208 137 0 0 chr2 25583993 25584293 -227672290 - AluSx SINE Alu -12 300 1 4113 139 23 64 chr2 25584293 25584338 -227672245 - L1MC1 LINE L1 -1020 5313 5268 2429 115 16 11 chr2 25584338 25584711 -227671872 - THE1C LTR MaLR 0 375 1 4113 139 23 64 chr2 25584711 25584881 -227671702 - L1MC1 LINE L1 -1065 5268 5187 2195 110 24 0 chr2 25584881 25585171 -227671412 - AluSx SINE Alu -15 297 1 4113 139 23 64 chr2 25585171 25585431 -227671152 - L1MC1 LINE L1 -1146 5187 4918 377 275 155 26 chr2 25586009 25586202 -227670381 - MIR SINE MIR -36 226 9 248 159 191 0 chr2 25588680 25588743 -227667840 - MIR3 SINE MIR -25 183 109 821 113 8 15 chr2 25588755 25588888 -227667695 + FLAM_C SINE Alu 2 133 0 2299 119 0 0 chr2 25589069 25589371 -227667212 - AluSx SINE Alu -10 302 1 287 228 0 0 chr2 25590232 25590289 -227666294 - MIR SINE MIR -74 188 132 30 27 0 0 chr2 25590582 25590619 -227665964 + AT_rich Low_complexity Low_complexity 1 37 0 270 0 0 0 chr2 25590628 25590658 -227665925 + (TG)n Simple_repeat Simple_repeat 2 31 0 2211 132 3 0 chr2 25590886 25591189 -227665394 + AluSx SINE Alu 1 304 -8 720 125 0 9 chr2 25593662 25593774 -227662809 - FLAM_A SINE Alu -4 138 28 2284 112 7 0 chr2 25594099 25594404 -227662179 - AluSx SINE Alu -2 310 4 2297 121 0 0 chr2 25597230 25597537 -227659046 + AluSx SINE Alu 1 307 -5 219 319 127 24 chr2 25598161 25598287 -227658296 - MIR SINE MIR -57 205 68 198 103 0 0 chr2 25599394 25599423 -227657160 + (CTG)n Simple_repeat Simple_repeat 3 31 0 2159 113 0 25 chr2 25599973 25600291 -227656292 + AluSx SINE Alu 1 310 -2 834 104 0 0 chr2 25600430 25600545 -227656038 + AluY SINE Alu 197 311 0 365 310 118 27 chr2 25600983 25601170 -227655413 - MIR3 SINE MIR 0 208 5 1343 144 0 5 chr2 25601429 25601631 -227654952 + AluSg/x SINE Alu 110 310 -2 318 191 16 0 chr2 25602330 25602393 -227654190 - AluJ/FLAM SINE Alu -218 84 21 741 273 10 19 chr2 25602395 25602436 -227654147 - MLT1G LTR MaLR 0 590 550 1719 98 4 18 chr2 25602436 25602661 -227653922 - AluSg/x SINE Alu -15 295 74 741 273 10 19 chr2 25602661 25602824 -227653759 - MLT1G LTR MaLR -40 550 388 2138 144 0 0 chr2 25602824 25603123 -227653460 + AluSx SINE Alu 1 299 -13 185 284 9 73 chr2 25603476 25603585 -227652998 + L3 LINE CR1 633 734 -843 303 344 13 4 chr2 25603876 25604041 -227652542 + L1ME4a LINE L1 5432 5591 -530 527 88 20 20 chr2 25604065 25604167 -227652416 + (TTTC)n Simple_repeat Simple_repeat 1 102 0 1953 153 0 0 chr2 25604177 25604477 -227652106 - AluSx SINE Alu 0 312 13 1585 188 3 38 chr2 25604670 25604957 -227651626 + AluJo SINE Alu 1 277 -35 291 93 0 0 chr2 25604957 25605000 -227651583 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1585 188 3 38 chr2 25605000 25605032 -227651551 + AluJo SINE Alu 277 309 -3 276 337 47 0 chr2 25605086 25605172 -227651411 + L2 LINE L2 3197 3286 -27 381 362 93 41 chr2 25605257 25605525 -227651058 + L1ME4a LINE L1 5840 6121 0 2171 121 0 3 chr2 25605525 25605838 -227650745 + AluJb SINE Alu 1 312 0 289 231 27 21 chr2 25605873 25605967 -227650616 + MLT1G3 LTR MaLR 451 590 0 471 298 44 58 chr2 25606106 25606311 -227650272 - L2 LINE L2 -1 3312 3111 373 242 152 12 chr2 25606385 25606550 -227650033 + HAL1 LINE L1 2025 2212 -295 180 253 44 44 chr2 25606711 25606802 -227649781 - L2 LINE L2 -2 3311 3221 1566 183 47 4 chr2 25606932 25607211 -227649372 - AluJo SINE Alu -21 291 1 278 363 48 0 chr2 25608328 25608452 -227648131 - MIR3 SINE MIR -15 193 64 2334 70 0 0 chr2 25611159 25611459 -227645124 + AluSp SINE Alu 1 300 -13 1548 160 12 89 chr2 25613542 25613867 -227642716 - AluJb SINE Alu -12 300 1 2258 75 0 0 chr2 25613951 25614244 -227642339 + AluSc SINE Alu 1 293 -16 267 315 87 0 chr2 25614437 25614529 -227642054 - LTR67 LTR ERVL -293 264 165 871 264 17 30 chr2 25614535 25614830 -227641753 - L1M4 LINE L1 -2250 3896 3606 1084 172 48 131 chr2 25614933 25615088 -227641495 - AluJo SINE Alu -13 289 123 198 0 0 0 chr2 25615088 25615110 -227641473 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1947 121 0 27 chr2 25615117 25615415 -227641168 - AluSx SINE Alu -22 290 1 2211 87 0 20 chr2 25615418 25615718 -227640865 - AluSx SINE Alu -13 299 6 1084 172 48 131 chr2 25615718 25615864 -227640719 - AluJo SINE Alu -187 115 2 392 229 150 0 chr2 25615913 25616053 -227640530 - L1ME4a LINE L1 -223 5898 5738 2074 127 7 0 chr2 25616821 25617121 -227639462 - AluSx SINE Alu -10 302 1 186 43 0 0 chr2 25617524 25617547 -227639036 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 2115 105 20 0 chr2 25617555 25617851 -227638732 - AluSx SINE Alu -10 302 1 280 316 15 41 chr2 25617921 25618117 -227638466 + L1MC5 LINE L1 7587 7777 -184 183 235 20 20 chr2 25619623 25619674 -227636909 + MER5A DNA MER1_type 136 186 -3 2186 109 0 10 chr2 25619679 25619992 -227636591 - AluSx SINE Alu -2 310 1 1868 125 0 14 chr2 25620971 25621251 -227635332 - AluSx SINE Alu -36 276 1 1705 171 3 16 chr2 25621533 25621838 -227634745 - AluJb SINE Alu -3 309 9 2130 77 50 17 chr2 25623408 25623706 -227632877 + AluSq SINE Alu 1 308 -5 198 271 17 17 chr2 25623828 25623887 -227632696 - MER5B DNA MER1_type -17 161 103 * 270 228 38 13 chr2 25623834 25623913 -227632670 + MER5A DNA MER1_type 35 115 -74 626 282 43 27 chr2 25624187 25624375 -227632208 - MER91A DNA MER1_type -4 192 2 21 36 0 0 chr2 25625794 25625822 -227630761 + GC_rich Low_complexity Low_complexity 1 28 0 246 132 40 26 chr2 25625888 25625964 -227630619 + (CCCCG)n Simple_repeat Simple_repeat 5 81 0 674 264 158 18 chr2 25626839 25627123 -227629460 + MER5C DNA MER1_type 1 324 0 307 313 20 0 chr2 25628238 25628337 -227628246 + GA-rich Low_complexity Low_complexity 2 102 0 699 164 8 16 chr2 25628453 25628581 -227628002 + AluSg/x SINE Alu 180 306 -4 420 31 47 0 chr2 25628813 25628877 -227627706 - L1PB2 LINE L1 -2 6149 6083 2360 60 10 10 chr2 25628880 25629180 -227627403 - AluY SINE Alu -11 300 1 251 287 32 51 chr2 25629215 25629372 -227627211 - L1ME4a LINE L1 -366 5755 5602 1971 124 3 3 chr2 25629816 25630158 -227626425 + AluSx SINE Alu 1 342 0 2235 92 7 0 chr2 25630662 25630957 -227625626 - AluSp SINE Alu -16 297 1 1031 89 0 0 chr2 25631306 25631441 -227625142 - AluSq/x SINE Alu -178 135 1 180 0 0 0 chr2 25631584 25631604 -227624979 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1833 133 0 14 chr2 25631609 25631888 -227624695 - AluSx SINE Alu -37 275 1 281 315 132 42 chr2 25632257 25632546 -227624037 - L3 LINE CR1 -346 1231 917 260 250 0 0 chr2 25633076 25633116 -227623467 + A-rich Low_complexity Low_complexity 1 40 0 2060 78 11 0 chr2 25633770 25634052 -227622531 + AluSp SINE Alu 28 312 -1 734 116 25 8 chr2 25634060 25634181 -227622402 - FLAM_C SINE Alu -7 126 4 214 253 13 109 chr2 25635745 25635902 -227620681 + MIR SINE MIR 68 210 -52 1862 118 45 3 chr2 25635910 25636197 -227620386 + AluSx SINE Alu 1 299 -13 29 28 0 0 chr2 25636489 25636525 -227620058 + AT_rich Low_complexity Low_complexity 1 36 0 2216 77 0 17 chr2 25636563 25636863 -227619720 - AluSx SINE Alu -17 295 1 194 202 32 11 chr2 25636878 25636972 -227619611 + (TA)n Simple_repeat Simple_repeat 1 96 0 309 274 11 63 chr2 25636979 25637074 -227619509 + L1MC4 LINE L1 6613 6702 -1340 254 156 47 0 chr2 25638027 25638091 -227618492 + CT-rich Low_complexity Low_complexity 2 68 0 459 0 0 0 chr2 25638772 25638823 -227617760 + (A)n Simple_repeat Simple_repeat 1 51 0 22 0 0 0 chr2 25638852 25638874 -227617709 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr2 25639249 25639280 -227617303 + AT_rich Low_complexity Low_complexity 1 31 0 242 44 0 67 chr2 25644334 25644379 -227612204 + (A)n Simple_repeat Simple_repeat 1 42 0 2251 90 10 0 chr2 25645752 25646053 -227610530 - AluSx SINE Alu -8 304 1 2268 84 3 0 chr2 25646636 25646933 -227609650 - AluSx SINE Alu -14 298 1 369 257 30 10 chr2 25647926 25648027 -227608556 + L1ME1 LINE L1 6020 6122 -44 2137 102 10 0 chr2 25648054 25648348 -227608235 + AluSx SINE Alu 1 297 -15 754 197 138 37 chr2 25649985 25650173 -227606410 + MER3 DNA MER1_type 1 207 -2 664 184 0 0 chr2 25651833 25651936 -227604647 - AluJb SINE Alu -208 104 2 467 271 86 56 chr2 25653393 25653590 -227602993 + L1ME4a LINE L1 5619 5809 -312 2150 89 21 0 chr2 25653590 25653881 -227602702 + AluSg SINE Alu 1 297 -13 467 271 86 56 chr2 25653881 25654056 -227602527 + L1ME4a LINE L1 5809 6002 -119 2230 109 7 0 chr2 25659110 25659413 -227597170 - AluSx SINE Alu -7 305 1 1170 33 0 20 chr2 25659435 25659585 -227596998 - L1PA4 LINE L1 -3 6152 6006 639 134 80 27 chr2 25659697 25659809 -227596774 + FLAM_A SINE Alu 13 130 -12 233 282 0 39 chr2 25661689 25661792 -227594791 + G-rich Low_complexity Low_complexity 3 101 0 305 263 0 0 chr2 25662840 25662920 -227593663 + G-rich Low_complexity Low_complexity 1 80 0 21 0 0 0 chr2 25663049 25663070 -227593513 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 25663175 25663196 -227593387 + GC_rich Low_complexity Low_complexity 1 21 0 260 259 69 61 chr2 25664337 25664355 -227592228 + MIR SINE MIR 39 55 -163 2374 87 0 0 chr2 25664355 25664655 -227591928 + AluSg SINE Alu 1 300 -10 260 259 69 61 chr2 25664655 25664754 -227591829 + MIR SINE MIR 55 155 -63 230 337 39 22 chr2 25666851 25667020 -227589563 + L2 LINE L2 2884 3058 -214 969 198 88 5 chr2 25667020 25667212 -227589371 - MER3 DNA MER1_type -1 208 1 232 324 0 0 chr2 25667225 25667296 -227589287 + CT-rich Low_complexity Low_complexity 3 73 0 189 326 72 43 chr2 25667373 25667511 -227589072 + L2 LINE L2 3165 3306 -7 376 296 92 33 chr2 25668253 25668405 -227588178 - MER5B DNA MER1_type -12 166 6 194 129 0 0 chr2 25668427 25668458 -227588125 - MIR SINE MIR -69 139 109 294 331 145 18 chr2 25670837 25671003 -227585580 - MER5A DNA MER1_type -2 187 1 1053 118 0 33 chr2 25671430 25671583 -227585000 + FRAM SINE Alu 4 151 -25 2175 102 0 31 chr2 25671591 25671736 -227584847 + AluSx SINE Alu 1 149 -163 2370 99 0 0 chr2 25671736 25672040 -227584543 + AluSx SINE Alu 1 304 -8 2175 102 0 31 chr2 25672040 25672216 -227584367 + AluSx SINE Alu 149 312 0 2200 102 0 16 chr2 25672484 25672788 -227583795 + AluSc SINE Alu 1 299 -10 417 185 68 34 chr2 25672866 25673012 -227583571 + L1MC4a LINE L1 5051 5201 -945 1425 157 99 4 chr2 25673530 25673792 -227582791 - AluJo SINE Alu -2 310 24 229 354 102 0 chr2 25673935 25674062 -227582521 + L2 LINE L2 3088 3227 -45 2216 121 0 0 chr2 25674712 25675019 -227581564 - AluSx SINE Alu -5 307 1 2345 60 17 0 chr2 25675042 25675341 -227581242 - AluY SINE Alu -7 304 1 345 357 21 7 chr2 25675519 25675662 -227580921 - MIR3 SINE MIR -34 174 30 2271 91 3 3 chr2 25676116 25676414 -227580169 + AluSx SINE Alu 1 298 -14 209 262 0 0 chr2 25676459 25676501 -227580082 + L2 LINE L2 3211 3252 -20 202 287 98 49 chr2 25676976 25677119 -227579464 + L2 LINE L2 3159 3308 -5 760 304 161 8 chr2 25677237 25677760 -227578823 + L1MC4a LINE L1 5344 5801 -363 1834 165 3 3 chr2 25677871 25678162 -227578421 + AluJo SINE Alu 1 291 -21 193 281 94 0 chr2 25678330 25678394 -227578189 - L2 LINE L2 -1 3271 3202 235 190 79 65 chr2 25678482 25678567 -227578016 - MIR SINE MIR -52 156 70 1889 140 7 23 chr2 25679621 25679921 -227576662 + AluSx SINE Alu 3 297 -15 198 324 0 67 chr2 25679929 25680034 -227576549 - L2 LINE L2 -173 3099 3002 216 185 62 77 chr2 25680803 25680868 -227575715 - MIR3 SINE MIR -2 206 143 31 0 0 0 chr2 25682440 25682471 -227574112 + GC_rich Low_complexity Low_complexity 1 31 0 2131 95 7 0 chr2 25682582 25682867 -227573716 + AluSg SINE Alu 24 310 0 2093 107 7 17 chr2 25685316 25685616 -227570967 + AluSx SINE Alu 1 297 -15 1191 87 6 46 chr2 25685616 25685789 -227570794 + AluSg/x SINE Alu 132 297 -13 225 0 0 0 chr2 25686264 25686289 -227570294 + (A)n Simple_repeat Simple_repeat 1 25 0 393 294 34 20 chr2 25687983 25688129 -227568454 - MIR SINE MIR -113 149 2 288 313 0 27 chr2 25689164 25689276 -227567307 + L2 LINE L2 2981 3089 -183 2424 69 0 3 chr2 25690199 25690503 -227566080 - AluSx SINE Alu -9 303 1 395 289 110 43 chr2 25690620 25690848 -227565735 - MIR SINE MIR -19 243 3 231 235 103 15 chr2 25692616 25692684 -227563899 + MIR SINE MIR 16 89 -119 236 311 164 33 chr2 25693805 25694049 -227562534 + L2 LINE L2 2992 3267 -5 330 373 47 26 chr2 25694073 25694266 -227562317 + L3b LINE CR1 1304 1500 -83 436 301 33 7 chr2 25694367 25694520 -227562063 - MIR SINE MIR -41 221 65 1117 60 0 0 chr2 25696739 25696872 -227559711 + AluSx SINE Alu 1 133 -179 444 99 0 14 chr2 25696876 25696947 -227559636 + MER51B LTR ERV1 212 281 -96 1256 132 0 0 chr2 25696956 25697146 -227559437 + AluSx SINE Alu 123 312 0 306 405 23 0 chr2 25697390 25697563 -227559020 - L3 LINE CR1 -342 1235 1059 1037 160 18 0 chr2 25698258 25698427 -227558156 - AluJb SINE Alu -14 298 127 1825 147 10 3 chr2 25698444 25698736 -227557847 - AluSx SINE Alu -18 294 1 188 405 41 0 chr2 25698871 25698992 -227557591 + L2 LINE L2 2956 3081 -191 341 250 16 73 chr2 25700462 25700586 -227555997 + MIR SINE MIR 96 212 -50 239 296 0 61 chr2 25700691 25700789 -227555794 - MER5C DNA MER1_type 0 324 233 186 236 91 0 chr2 25700879 25700934 -227555649 + MER5C DNA MER1_type 2 61 -263 2368 85 3 0 chr2 25702267 25702572 -227554011 - AluSx SINE Alu -6 306 1 334 264 46 0 chr2 25702628 25702715 -227553868 - MIR SINE MIR -99 163 73 405 340 62 6 chr2 25702833 25702995 -227553588 - MIR SINE MIR -72 190 20 194 357 188 0 chr2 25704297 25704409 -227552174 + MIR SINE MIR 18 150 -58 2301 109 0 0 chr2 25704411 25704723 -227551860 + AluSx SINE Alu 1 312 0 395 309 23 47 chr2 25705154 25705222 -227551361 - L1MC4 LINE L1 -160 7801 7733 914 121 0 0 chr2 25705222 25705346 -227551237 + FLAM_C SINE Alu 1 124 -9 395 309 23 47 chr2 25705346 25705357 -227551226 - L1MC4 LINE L1 -228 7733 7723 22 35 0 0 chr2 25705357 25705386 -227551197 + AT_rich Low_complexity Low_complexity 1 29 0 395 309 23 47 chr2 25705386 25705542 -227551041 - L1MC4 LINE L1 -238 7723 6608 2154 103 10 10 chr2 25705752 25706062 -227550521 + AluY SINE Alu 2 311 0 279 139 0 0 chr2 25707693 25707736 -227548847 + MIR SINE MIR 106 148 -114 321 206 0 27 chr2 25707778 25707851 -227548732 + L2 LINE L2 3201 3271 -42 399 354 0 8 chr2 25708663 25708793 -227547790 + L3 LINE CR1 618 746 -831 32 43 0 0 chr2 25709225 25709271 -227547312 + GC_rich Low_complexity Low_complexity 1 46 0 482 270 44 19 chr2 25709668 25709827 -227546756 + L3 LINE CR1 1407 1569 -8 248 241 230 0 chr2 25710543 25710630 -227545953 + L2 LINE L2 3161 3267 -5 618 265 157 10 chr2 25710787 25710991 -227545592 - MIR SINE MIR 0 262 29 1846 160 0 10 chr2 25711004 25711311 -227545272 - AluJo SINE Alu -8 304 1 2247 100 3 0 chr2 25711360 25711660 -227544923 + AluSx SINE Alu 5 305 -7 415 114 14 0 chr2 25712065 25712135 -227544448 - MLT1I LTR MaLR -8 401 331 3321 123 37 78 chr2 25712135 25712266 -227544317 + L1MB3 LINE L1 5566 5701 -482 2278 105 0 0 chr2 25712266 25712572 -227544011 - AluSq SINE Alu -7 306 1 3321 123 37 78 chr2 25712572 25713027 -227543556 + L1MB3 LINE L1 5701 6173 -10 2345 74 0 0 chr2 25713027 25713325 -227543258 + AluY SINE Alu 1 298 -13 2190 111 0 0 chr2 25713328 25713625 -227542958 + AluSq SINE Alu 3 299 -14 2274 76 0 3 chr2 25713625 25713916 -227542667 + AluSc SINE Alu 1 290 -19 3321 123 37 78 chr2 25713916 25713967 -227542616 + L1MB3 LINE L1 6173 6183 0 253 214 36 150 chr2 25713999 25714139 -227542444 - MLT1I LTR MaLR -54 355 232 295 238 99 10 chr2 25714193 25714294 -227542289 - MLT1I LTR MaLR -299 110 1 304 276 32 77 chr2 25714897 25715053 -227541530 - MLT1K LTR MaLR -163 425 277 195 42 0 0 chr2 25715169 25715193 -227541390 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 245 296 12 0 chr2 25715232 25715313 -227541270 - MLT1K LTR MaLR -324 264 183 2257 97 0 3 chr2 25715507 25715816 -227540767 - AluSc SINE Alu -1 308 1 544 211 0 44 chr2 25715816 25715973 -227540610 + L1MB5 LINE L1 6040 6184 0 2447 229 90 57 chr2 25716862 25717120 -227539463 + L1MC4 LINE L1 6637 6885 -900 2393 142 31 68 chr2 25717120 25717455 -227539128 + MSTB1 LTR MaLR 5 322 -110 2184 126 7 0 chr2 25717455 25717765 -227538818 - AluSx SINE Alu 0 312 1 2393 142 31 68 chr2 25717765 25717873 -227538710 + MSTB1 LTR MaLR 322 432 0 2447 229 90 57 chr2 25717873 25718499 -227538084 + L1MC4 LINE L1 6885 7489 -296 2249 108 0 6 chr2 25718499 25718813 -227537770 + AluSx SINE Alu 1 312 0 2447 229 90 57 chr2 25718813 25718854 -227537729 + L1MC4 LINE L1 7489 7527 -258 2214 98 7 3 chr2 25718854 25719160 -227537423 + AluSc SINE Alu 3 309 0 2447 229 90 57 chr2 25719160 25719231 -227537352 + L1MC4 LINE L1 7527 7649 -136 260 164 0 0 chr2 25719247 25719302 -227537281 + L1MC4 LINE L1 7988 8042 0 * 673 246 175 4 chr2 25719300 25719568 -227537015 - L1MC/D LINE L1 -2230 5578 5265 1588 199 98 62 chr2 25719944 25720233 -227536350 - L1MD1 LINE L1 0 6242 5965 2410 74 0 16 chr2 25720233 25720545 -227536038 + AluY SINE Alu 1 307 -4 2147 128 0 3 chr2 25720554 25720867 -227535716 + AluSx SINE Alu 1 312 0 1588 199 98 62 chr2 25720867 25721086 -227535497 - L1MD1 LINE L1 -284 5958 5705 2217 87 0 45 chr2 25721358 25721669 -227534914 + AluSx SINE Alu 1 297 -15 1653 227 128 42 chr2 25722056 25722602 -227533981 - MLT1E LTR MaLR 0 593 1 1666 162 61 82 chr2 25723400 25723772 -227532811 + MSTA LTR MaLR 13 391 -37 2182 102 0 0 chr2 25723772 25724088 -227532495 - AluSx SINE Alu 0 316 1 2203 112 0 3 chr2 25724094 25724406 -227532177 - AluY SINE Alu 0 311 1 1666 162 61 82 chr2 25724406 25724450 -227532133 + MSTA LTR MaLR 396 428 0 1200 205 31 87 chr2 25724471 25724677 -227531906 + MLT1D LTR MaLR 1 176 -329 2247 106 3 0 chr2 25724677 25724980 -227531603 + AluSx SINE Alu 1 304 -8 1200 205 31 87 chr2 25724980 25725163 -227531420 + MLT1D LTR MaLR 176 368 -137 361 322 33 10 chr2 25725201 25725362 -227531221 + MIR3 SINE MIR 13 176 -78 201 311 68 10 chr2 25725528 25725631 -227530952 - MIR SINE MIR -57 151 43 201 308 22 33 chr2 25725684 25725775 -227530808 + MIR3 SINE MIR 5 94 -114 249 337 54 0 chr2 25725776 25725868 -227530715 + MIR SINE MIR 150 246 -16 2150 119 0 3 chr2 25726004 25726315 -227530268 - AluSg SINE Alu 0 310 1 185 277 234 0 chr2 25726332 25726426 -227530157 - MIR SINE MIR -65 143 28 1269 77 0 0 chr2 25727657 25727813 -227528770 + AluSp SINE Alu 129 284 -29 1570 147 10 34 chr2 25727870 25728162 -227528421 + AluSq SINE Alu 21 305 -8 182 325 26 61 chr2 25728327 25728441 -227528142 + MIR SINE MIR 36 145 -63 278 213 43 43 chr2 25728683 25728777 -227527806 + L1MC5 LINE L1 7832 7925 -36 2210 102 0 0 chr2 25728782 25729076 -227527507 - AluSx SINE Alu -18 294 1 1044 151 33 142 chr2 25729589 25729802 -227526781 - AluSg SINE Alu 0 300 136 2329 91 0 3 chr2 25729802 25730109 -227526474 - AluSq SINE Alu -7 306 1 1044 151 33 142 chr2 25730109 25730232 -227526351 - AluSg SINE Alu -164 136 1 515 312 214 18 chr2 25730493 25731162 -227525421 + L2 LINE L2 1804 2603 -711 703 310 190 18 chr2 25731163 25731636 -227524947 + L2 LINE L2 2731 3272 0 235 313 72 0 chr2 25732502 25732585 -227523998 - L2 LINE L2 -5 3308 3220 424 265 34 8 chr2 25732912 25733029 -227523554 + MIR3 SINE MIR 88 207 -1 259 284 197 8 chr2 25733129 25733256 -227523327 + MIR SINE MIR 105 255 -7 312 264 165 60 chr2 25734508 25734690 -227521893 - MIR3 SINE MIR -6 202 2 390 21 0 0 chr2 25734830 25734877 -227521706 + (CA)n Simple_repeat Simple_repeat 1 47 0 441 270 0 10 chr2 25735266 25735366 -227521217 + MIR SINE MIR 58 156 -106 2118 120 0 13 chr2 25735372 25735673 -227520910 + AluSx SINE Alu 1 297 -15 439 278 199 0 chr2 25735711 25735862 -227520721 - MER5A DNA MER1_type 0 189 9 2095 131 0 13 chr2 25736507 25736819 -227519764 - AluSx SINE Alu -4 308 1 291 85 0 0 chr2 25737121 25737168 -227519415 + (C)n Simple_repeat Simple_repeat 1 47 0 385 320 24 48 chr2 25737416 25737622 -227518961 + L2 LINE L2 3111 3311 -2 362 339 36 23 chr2 25738034 25738252 -227518331 + MIR SINE MIR 35 255 -7 181 284 156 28 chr2 25738418 25738527 -227518056 + MIR SINE MIR 136 258 -4 739 279 42 48 chr2 25738805 25739135 -227517448 - MER102b DNA MER1_type 0 341 14 2155 113 7 0 chr2 25739909 25740211 -227516372 + AluSx SINE Alu 1 304 -8 219 342 18 11 chr2 25740707 25740842 -227515741 - MIR SINE MIR -72 136 2 199 277 17 6 chr2 25741046 25741111 -227515472 + MIR SINE MIR 93 159 -49 302 266 51 0 chr2 25741138 25741192 -227515391 - L1ME4a LINE L1 0 6121 6060 2078 119 26 26 chr2 25741192 25741503 -227515080 + AluSx SINE Alu 1 311 -1 302 266 51 0 chr2 25741503 25741527 -227515056 - L1ME4a LINE L1 -61 6060 6039 431 293 223 0 chr2 25741705 25742005 -227514578 - L1MC4a LINE L1 -1878 5930 5564 189 0 0 0 chr2 25742181 25742202 -227514381 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 183 314 16 91 chr2 25743724 25743845 -227512738 + L2 LINE L2 3186 3297 -16 931 161 50 55 chr2 25744401 25744619 -227511964 + MER20 DNA MER1_type 3 219 0 2153 109 7 3 chr2 25744667 25744961 -227511622 - AluSq SINE Alu -18 295 1 752 175 131 8 chr2 25744991 25745223 -227511360 - L1MB3 LINE L1 -7 6173 5915 2301 68 17 0 chr2 25745458 25745751 -227510832 - AluSx SINE Alu -14 298 1 1024 194 18 127 chr2 25746316 25746656 -227509927 - AluJo SINE Alu -9 303 1 1835 109 3 25 chr2 25746672 25746955 -227509628 - AluSx SINE Alu -12 300 24 323 287 171 8 chr2 25747089 25747218 -227509365 + MIR SINE MIR 103 252 -10 247 339 173 36 chr2 25747598 25747905 -227508678 + L2 LINE L2 2911 3259 -13 289 303 31 71 chr2 25748306 25748524 -227508059 - MIR3 SINE MIR -50 212 3 183 267 89 33 chr2 25749289 25749379 -227507204 + L2 LINE L2 3162 3256 -16 249 159 23 0 chr2 25749844 25749888 -227506695 + MIR SINE MIR 105 149 -113 641 199 64 21 chr2 25750142 25750283 -227506300 - AluSx SINE Alu -159 153 7 2194 115 3 0 chr2 25750291 25750596 -227505987 - AluSq SINE Alu -7 306 1 348 127 0 0 chr2 25750991 25751046 -227505537 + (TAGG)n Simple_repeat Simple_repeat 4 58 0 333 68 0 0 chr2 25751797 25751841 -227504742 + (CA)n Simple_repeat Simple_repeat 1 44 0 274 274 21 32 chr2 25752096 25752191 -227504392 + GA-rich Low_complexity Low_complexity 2 95 0 640 265 32 60 chr2 25752419 25752603 -227503980 + MIR SINE MIR 20 197 -65 2191 71 14 20 chr2 25752603 25752900 -227503683 + AluY SINE Alu 1 295 -16 640 265 32 60 chr2 25752900 25752964 -227503619 + MIR SINE MIR 197 261 -1 204 313 94 10 chr2 25753474 25753570 -227503013 - L2 LINE L2 -1 3312 3209 732 201 103 17 chr2 25753601 25753775 -227502808 - MER5A DNA MER1_type 0 189 1 203 130 0 22 chr2 25753941 25753987 -227502596 + (CGGGGG)n Simple_repeat Simple_repeat 2 46 0 406 298 71 61 chr2 25754538 25754736 -227501847 - MIR SINE MIR -57 205 6 194 209 77 0 chr2 25755450 25755514 -227501069 + MIR SINE MIR 116 185 -77 249 346 10 10 chr2 25756349 25756450 -227500133 - MIR SINE MIR -76 132 32 220 295 338 0 chr2 25756501 25756640 -227499943 + MIR SINE MIR 6 191 -71 180 298 0 0 chr2 25758810 25758857 -227497726 + MIR3 SINE MIR 109 155 -53 721 287 217 51 chr2 25759826 25759879 -227496704 + HAL1 LINE L1 24 67 -2440 1626 161 7 20 chr2 25759879 25760184 -227496399 - AluJo SINE Alu -11 301 1 721 287 217 51 chr2 25760184 25760557 -227496026 + HAL1 LINE L1 67 376 -2131 2238 80 7 0 chr2 25760557 25760856 -227495727 - AluSp SINE Alu -12 301 1 721 287 217 51 chr2 25760856 25761100 -227495483 + HAL1 LINE L1 376 807 -1700 2092 115 3 0 chr2 25761103 25761408 -227495175 - AluSx SINE Alu -6 306 1 398 229 190 78 chr2 25761436 25761509 -227495074 + HAL1 LINE L1 1567 1630 -877 2339 87 0 6 chr2 25761509 25761821 -227494762 - AluY SINE Alu -1 310 1 2396 75 0 0 chr2 25761827 25762134 -227494449 - AluY SINE Alu -2 309 3 970 103 0 22 chr2 25762136 25762272 -227494311 - AluJo/FLAM SINE Alu -169 133 1 398 229 190 78 chr2 25762272 25762472 -227494111 + HAL1 LINE L1 1634 1882 -625 2148 119 0 0 chr2 25762581 25762892 -227493691 - AluSx SINE Alu -1 311 1 753 233 65 122 chr2 25762925 25763193 -227493390 + HAL1 LINE L1 1697 1924 -583 1005 117 0 0 chr2 25763193 25763338 -227493245 + L1MA6 LINE L1 6156 6300 0 753 233 65 122 chr2 25763338 25763579 -227493004 + HAL1 LINE L1 1924 2177 -330 198 167 0 0 chr2 25763579 25763615 -227492968 + (TATG)n Simple_repeat Simple_repeat 3 38 0 2365 145 18 59 chr2 25763636 25763672 -227492911 - MLT1D LTR MaLR -32 473 437 2305 71 0 3 chr2 25763672 25763967 -227492616 + AluSp SINE Alu 1 294 -19 2365 145 18 59 chr2 25763967 25764421 -227492162 - MLT1D LTR MaLR -68 437 3 1505 158 62 4 chr2 25764441 25764714 -227491869 + AluJo SINE Alu 1 289 -23 749 231 62 33 chr2 25764809 25765051 -227491532 + HAL1 LINE L1 2258 2506 -1 197 212 227 0 chr2 25765119 25765185 -227491398 + MIR3 SINE MIR 117 197 -11 393 260 156 12 chr2 25765922 25766095 -227490488 + MLT1K LTR MaLR 211 408 -180 656 293 80 5 chr2 25766268 25766480 -227490103 + MIR SINE MIR 35 262 0 779 221 11 47 chr2 25766572 25766788 -227489795 - MIR SINE MIR -18 244 37 798 242 62 9 chr2 25767018 25767229 -227489354 - MIR SINE MIR -13 249 28 1184 302 21 42 chr2 25768359 25768914 -227487669 + ERVL LTR ERVL 4813 5399 -153 410 0 20 0 chr2 25768930 25768980 -227487603 + (TG)n Simple_repeat Simple_repeat 2 52 0 2020 207 56 132 chr2 25769288 25770124 -227486459 + LTR41 LTR ERVL 1 773 0 447 124 56 0 chr2 25770951 25771040 -227485543 + L1MB7 LINE L1 6091 6184 0 300 53 0 0 chr2 25771754 25771792 -227484791 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 10161 169 19 0 chr2 25771792 25772983 -227483600 + L1PB1 LINE L1 3193 4361 -1790 234 0 0 0 chr2 25772983 25773009 -227483574 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 10161 169 19 0 chr2 25773009 25774728 -227481855 + L1PB1 LINE L1 4361 6151 0 243 200 12 38 chr2 25774746 25774826 -227481757 + (TA)n Simple_repeat Simple_repeat 1 78 0 328 253 42 21 chr2 25774842 25774937 -227481646 + L1MC4 LINE L1 6603 6699 -1343 3184 71 9 43 chr2 25775323 25775590 -227480993 + L1PB1 LINE L1 5706 5952 -199 1926 135 0 0 chr2 25775590 25775872 -227480711 + AluSx SINE Alu 21 302 -10 3184 71 9 43 chr2 25775872 25776066 -227480517 + L1PB1 LINE L1 5952 6151 0 207 0 0 0 chr2 25776073 25776096 -227480487 + (A)n Simple_repeat Simple_repeat 1 23 0 751 151 16 8 chr2 25776404 25776562 -227480021 + L1MB8 LINE L1 5595 5748 -416 860 153 0 0 chr2 25776562 25776706 -227479877 + AluSg/x SINE Alu 164 307 -3 589 200 8 24 chr2 25776706 25776844 -227479739 + L1MB8 LINE L1 5865 5989 -182 2216 101 7 0 chr2 25776939 25777246 -227479337 + AluSx SINE Alu 1 309 -3 204 220 20 40 chr2 25778232 25778282 -227478301 + L2 LINE L2 3264 3312 -1 2187 82 7 14 chr2 25778399 25778691 -227477892 - AluSc SINE Alu -19 290 1 1811 146 24 0 chr2 25778691 25778979 -227477604 - AluSx SINE Alu -17 295 1 351 189 68 10 chr2 25779023 25779137 -227477446 + MLT1F1 LTR MaLR 1 116 -451 374 241 125 9 chr2 25780377 25780489 -227476094 - MIR3 SINE MIR -49 159 35 210 219 0 0 chr2 25780900 25780941 -227475642 + L2 LINE L2 3255 3295 -18 2213 89 0 0 chr2 25782465 25782756 -227473827 - AluSx SINE Alu -21 291 1 746 183 48 81 chr2 25783091 25783138 -227473445 + MIR SINE MIR 5 52 -210 768 181 0 0 chr2 25783138 25783271 -227473312 - FLAM_A SINE Alu 0 133 1 746 183 48 81 chr2 25783271 25783409 -227473174 + MIR SINE MIR 52 184 -78 2245 95 0 0 chr2 25783913 25784209 -227472374 + AluSq SINE Alu 1 296 -17 1622 158 54 30 chr2 25784271 25784568 -227472015 - AluJb SINE Alu -8 304 1 1968 114 7 0 chr2 25784599 25784899 -227471684 + AluSx SINE Alu 1 302 0 433 196 131 19 chr2 25784953 25785106 -227471477 + MER58 DNA MER1_type 50 2420 0 320 242 16 0 chr2 25785609 25785671 -227470912 + MER20 DNA MER1_type 79 141 -78 1731 60 0 14 chr2 25785674 25785892 -227470691 + AluSp SINE Alu 86 300 -13 284 97 0 161 chr2 25785892 25785954 -227470629 + AluSq/x SINE Alu 78 129 -173 241 312 0 13 chr2 25785963 25786040 -227470543 + MER20 DNA MER1_type 138 213 -6 29 47 0 0 chr2 25786324 25786367 -227470216 + AT_rich Low_complexity Low_complexity 1 43 0 5584 118 11 4 chr2 25786449 25787272 -227469311 + L1PB3 LINE L1 5326 6154 0 387 148 0 0 chr2 25787308 25787362 -227469221 + AluSx SINE Alu 32 85 -217 2166 104 0 10 chr2 25787363 25787661 -227468922 + AluSp SINE Alu 1 295 -18 1571 111 0 37 chr2 25787661 25787903 -227468680 + AluSx SINE Alu 71 305 -5 330 26 0 0 chr2 25788567 25788606 -227467977 + (TTCA)n Simple_repeat Simple_repeat 2 40 0 342 339 132 29 chr2 25788918 25789425 -227467158 + L2 LINE L2 1835 2484 -830 631 242 27 0 chr2 25789775 25789924 -227466659 + LTR23-int LTR ERV1 4971 5123 0 1262 172 26 4 chr2 25789925 25790157 -227466426 + LTR23 LTR ERV1 1 237 -200 332 114 0 0 chr2 25790175 25790219 -227466364 - MER4E LTR ERV1 -70 696 653 953 129 17 39 chr2 25790220 25790398 -227466185 + LTR23 LTR ERV1 226 399 -38 2241 105 0 0 chr2 25790416 25790722 -227465861 + AluSq SINE Alu 1 306 -7 7490 34 14 0 chr2 25792610 25793588 -227462995 - L1PA5 LINE L1 -3 6151 5183 2190 88 7 7 chr2 25793588 25793893 -227462690 - AluY SINE Alu -6 305 1 398 275 22 0 chr2 25794073 25794164 -227462419 - L2 LINE L2 -6 3266 3174 1242 174 11 76 chr2 25794519 25794581 -227462002 + MER21B LTR ERV1 1 65 -798 1672 95 0 0 chr2 25794581 25794802 -227461781 - AluSg/x SINE Alu -7 305 85 1242 174 11 76 chr2 25794802 25795003 -227461580 + MER21B LTR ERV1 65 247 -616 341 256 56 24 chr2 25795104 25795229 -227461354 + L1MEc LINE L1 606 734 -5662 1449 266 59 35 chr2 25795280 25795973 -227460610 + L1MEc LINE L1 1429 2138 -4258 1077 275 8 5 chr2 25795978 25796352 -227460231 + L1MEc LINE L1 2362 2736 -3479 1823 110 53 7 chr2 25796926 25797208 -227459375 - AluSg SINE Alu -15 295 1 335 353 50 27 chr2 25797699 25797920 -227458663 + MIR SINE MIR 18 243 -19 543 147 63 11 chr2 25798140 25798235 -227458348 - THE1C LTR MaLR -275 100 1 367 336 83 6 chr2 25798253 25798604 -227457979 - L1ME LINE L1 -365 5756 5379 360 324 87 0 chr2 25798632 25798805 -227457778 - MIR SINE MIR -13 249 62 235 354 135 0 chr2 25799655 25799751 -227456832 + L2 LINE L2 3155 3263 -9 885 164 77 72 chr2 25800732 25800940 -227455643 + MER58A DNA MER1_type 1 209 -15 1591 179 16 35 chr2 25801121 25801439 -227455144 + AluJo SINE Alu 1 312 0 2111 121 0 10 chr2 25802094 25802401 -227454182 - AluSx SINE Alu -8 304 1 1918 124 0 41 chr2 25803112 25803426 -227453157 - AluSx SINE Alu -11 301 1 2473 234 42 28 chr2 25803753 25804404 -227452179 + MER21B LTR ERV1 156 815 -48 2041 110 20 0 chr2 25804572 25804864 -227451719 + AluSx SINE Alu 1 298 -14 561 15 0 0 chr2 25804966 25805032 -227451551 + (GGAA)n Simple_repeat Simple_repeat 1 66 0 22 0 0 0 chr2 25805630 25805652 -227450931 + AT_rich Low_complexity Low_complexity 1 22 0 657 215 12 1 chr2 25806046 25806194 -227450389 + MLT1I LTR MaLR 18 166 -243 209 206 0 63 chr2 25806429 25806492 -227450091 + CT-rich Low_complexity Low_complexity 2 60 0 2293 85 0 0 chr2 25806601 25806895 -227449688 + AluSg SINE Alu 1 294 -16 333 213 111 46 chr2 25807941 25808049 -227448534 - MIR3 SINE MIR -23 185 71 692 215 79 17 chr2 25808150 25808327 -227448256 + MER5A DNA MER1_type 2 189 0 1957 128 63 33 chr2 25808715 25809530 -227447053 + SVA Other Other 458 868 -518 5984 107 35 36 chr2 25809562 25810518 -227446065 + SVA Other Other 432 1386 0 288 70 0 0 chr2 25810538 25810581 -227446002 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 191 269 121 50 chr2 25810856 25810997 -227445586 - L2 LINE L2 -450 2864 2714 189 0 0 0 chr2 25811166 25811187 -227445396 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 1545 160 4 15 chr2 25811187 25811449 -227445134 - AluJb SINE Alu -48 264 6 2196 112 31 0 chr2 25811925 25812219 -227444364 - AluSx SINE Alu -9 303 1 241 204 0 0 chr2 25812776 25812825 -227443758 + U5 snRNA snRNA 1 49 -67 306 211 110 55 chr2 25813075 25813184 -227443399 - MIR3 SINE MIR -23 185 71 686 220 79 17 chr2 25813285 25813462 -227443121 + MER5A DNA MER1_type 2 189 0 234 0 0 0 chr2 25813580 25813606 -227442977 + (T)n Simple_repeat Simple_repeat 1 26 0 564 42 0 0 chr2 25813781 25813852 -227442731 + (TCTA)n Simple_repeat Simple_repeat 3 73 0 1478 137 133 4 chr2 25813852 25814100 -227442483 - AluJb SINE Alu -32 280 1 2234 116 26 0 chr2 25815714 25816017 -227440566 - AluSx SINE Alu -1 311 1 1174 136 35 0 chr2 25816201 25816370 -227440213 - AluSx SINE Alu -137 175 1 192 40 0 0 chr2 25816699 25816724 -227439859 + (CCA)n Simple_repeat Simple_repeat 1 25 0 545 133 22 33 chr2 25817348 25817438 -227439145 + FRAM SINE Alu 20 108 -68 1203 144 20 0 chr2 25817562 25817757 -227438826 + MLT2B3 LTR ERVL 1 199 -355 392 303 15 0 chr2 25817761 25817893 -227438690 - L1ME3A LINE L1 -328 5842 5709 1004 215 26 32 chr2 25817896 25818209 -227438374 + MLT2B2 LTR ERVL 258 515 0 1868 138 0 17 chr2 25818302 25818592 -227437991 + AluSx SINE Alu 1 285 -27 396 0 0 0 chr2 25818592 25818636 -227437947 + (CA)n Simple_repeat Simple_repeat 2 45 0 366 298 158 18 chr2 25819086 25819257 -227437326 + MIR SINE MIR 26 220 -42 206 157 0 20 chr2 25819585 25819636 -227436947 + (TCTCTG)n Simple_repeat Simple_repeat 1 50 0 2348 93 3 3 chr2 25819843 25820144 -227436439 - AluSx SINE Alu -11 301 1 327 326 134 17 chr2 25820166 25820338 -227436245 + MIR SINE MIR 20 211 -51 1214 254 35 0 chr2 25820447 25820758 -227435825 + MER33 DNA MER1_type 1 322 -2 228 205 60 0 chr2 25821507 25821590 -227434993 + (TA)n Simple_repeat Simple_repeat 2 89 0 230 292 138 0 chr2 25822488 25822618 -227433965 - L1ME3A LINE L1 -963 5183 5036 1094 56 0 0 chr2 25822618 25822743 -227433840 - AluSp/q SINE Alu -17 296 172 338 320 93 7 chr2 25822743 25822893 -227433690 - L1ME3A LINE L1 -1102 5044 4882 342 0 0 0 chr2 25823619 25823657 -227432926 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr2 25824930 25824952 -227431631 + AT_rich Low_complexity Low_complexity 1 22 0 2411 199 83 21 chr2 25825493 25825814 -227430769 - L1ME1 LINE L1 -6 6160 5860 851 155 75 43 chr2 25825814 25825975 -227430608 - FRAM SINE Alu 0 166 1 2411 199 83 21 chr2 25825975 25826307 -227430276 - L1ME1 LINE L1 -306 5860 5467 3305 156 160 19 chr2 25826369 25826436 -227430147 - L1MB7 LINE L1 0 6184 6128 2102 141 3 3 chr2 25826436 25826733 -227429850 - AluSx SINE Alu -15 297 1 3305 156 160 19 chr2 25826733 25827417 -227429166 - L1MB7 LINE L1 -56 6128 5326 2189 127 3 0 chr2 25827471 25827770 -227428813 + AluSg SINE Alu 4 303 -7 454 266 167 26 chr2 25828099 25828291 -227428292 - MIR SINE MIR -43 219 1 596 159 29 72 chr2 25829835 25829973 -227426610 + AluJ SINE Alu 2 133 -169 2038 108 0 0 chr2 25829993 25830252 -227426331 + AluSg SINE Alu 1 259 -51 1096 182 0 30 chr2 25830321 25830519 -227426064 + AluJ SINE Alu 120 311 -1 2306 110 0 0 chr2 25831054 25831353 -227425230 - AluSx SINE Alu -13 299 1 486 287 12 12 chr2 25831575 25831742 -227424841 - Charlie8 DNA MER1_type -2214 203 37 524 154 0 0 chr2 25832280 25832358 -227424225 - AluSg/x SINE Alu -13 296 219 2043 92 0 8 chr2 25832361 25832622 -227423961 - AluSq SINE Alu -54 259 1 4687 108 46 42 chr2 25834321 25835097 -227421486 + MER4E LTR ERV1 1 779 0 261 0 0 0 chr2 25835650 25835679 -227420904 + (T)n Simple_repeat Simple_repeat 1 29 0 936 222 11 0 chr2 25839233 25839418 -227417165 + MER5A DNA MER1_type 3 189 0 23 33 0 0 chr2 25840834 25840864 -227415719 + GC_rich Low_complexity Low_complexity 1 30 0 194 278 37 0 chr2 25841956 25842010 -227414573 + MIR SINE MIR 18 73 -135 183 205 0 0 chr2 25845150 25845189 -227411394 + (TG)n Simple_repeat Simple_repeat 2 40 0 2019 153 14 0 chr2 25845346 25845640 -227410943 - AluJo SINE Alu -14 298 1 370 207 155 9 chr2 25846244 25846360 -227410223 - L2 LINE L2 -19 3294 3162 391 247 124 67 chr2 25846417 25846485 -227410098 + MIR SINE MIR 2 65 -197 2462 94 0 0 chr2 25846485 25846794 -227409789 - AluSx SINE Alu -3 309 1 391 247 124 67 chr2 25846794 25846919 -227409664 + MIR SINE MIR 65 206 -56 2312 96 6 16 chr2 25847170 25847484 -227409099 - AluSq SINE Alu -2 311 1 1087 325 59 28 chr2 25848173 25848831 -227407752 + L3 LINE CR1 809 1554 -23 2342 111 7 0 chr2 25848832 25849139 -227407444 - AluSx SINE Alu 0 312 4 402 303 71 13 chr2 25849548 25849703 -227406880 + MIR3 SINE MIR 40 203 -5 249 33 0 0 chr2 25852766 25852796 -227403787 + (TG)n Simple_repeat Simple_repeat 2 31 0 2025 132 3 3 chr2 25852819 25853108 -227403475 - AluSx SINE Alu -23 289 1 217 244 171 40 chr2 25853110 25853240 -227403343 - MIR SINE MIR -65 143 17 384 22 0 0 chr2 25853806 25853851 -227402732 + (TG)n Simple_repeat Simple_repeat 2 46 0 233 167 67 0 chr2 25854257 25854317 -227402266 + L1M4 LINE L1 4987 5050 -1096 2112 137 3 13 chr2 25854393 25854708 -227401875 - AluSx SINE Alu 0 312 1 1625 180 35 14 chr2 25854742 25854857 -227401726 + L1M4 LINE L1 4973 5084 -1090 2549 67 0 0 chr2 25854857 25855157 -227401426 - AluY SINE Alu -11 300 1 1625 180 35 14 chr2 25855157 25855620 -227400963 + L1M4 LINE L1 5084 5557 -617 * 11348 178 19 4 chr2 25855618 25856088 -227400495 + L1PB1 LINE L1 2722 3183 -2968 2264 91 0 3 chr2 25856088 25856374 -227400209 + AluSx SINE Alu 1 285 -27 300 53 0 0 chr2 25856374 25856412 -227400171 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 11348 178 19 4 chr2 25856412 25857603 -227398980 + L1PB1 LINE L1 3183 4354 -1797 234 0 0 0 chr2 25857603 25857629 -227398954 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 11348 178 19 4 chr2 25857629 25859348 -227397235 + L1PB1 LINE L1 4354 6151 0 342 208 17 17 chr2 25859379 25859557 -227397026 + (TA)n Simple_repeat Simple_repeat 2 179 0 2071 75 4 0 chr2 25859942 25860209 -227396374 + L1PB1 LINE L1 5706 5973 -178 2022 131 0 3 chr2 25860209 25860499 -227396084 + AluSx SINE Alu 21 309 -3 1076 154 0 0 chr2 25860499 25860661 -227395922 + AluSg/x SINE Alu 134 295 -17 258 81 0 0 chr2 25861277 25861314 -227395269 + (CA)n Simple_repeat Simple_repeat 1 37 0 2528 59 0 7 chr2 25861346 25861652 -227394931 - AluY SINE Alu -7 304 1 681 275 165 43 chr2 25861905 25862138 -227394445 + L2 LINE L2 2243 2446 -826 2278 108 0 3 chr2 25862138 25862443 -227394140 - AluSx SINE Alu -8 304 1 681 275 165 43 chr2 25862443 25862644 -227393939 + L2 LINE L2 2446 2621 -651 1061 54 78 0 chr2 25862644 25862773 -227393810 + MER85 DNA T2_type 1 139 0 681 275 165 43 chr2 25862773 25862796 -227393787 + L2 LINE L2 2621 2640 -632 1914 166 0 0 chr2 25862796 25863097 -227393486 + AluJb SINE Alu 3 303 -9 681 275 165 43 chr2 25863097 25863363 -227393220 + L2 LINE L2 2640 3068 -204 603 140 21 0 chr2 25863367 25863460 -227393123 - AluJ SINE Alu -7 305 211 871 99 20 80 chr2 25863460 25863611 -227392972 - AluJ SINE Alu -170 142 1 338 242 110 60 chr2 25863622 25863804 -227392779 + L2 LINE L2 3089 3279 -34 202 240 308 0 chr2 25863830 25863934 -227392649 - MIR SINE MIR -4 258 123 191 250 163 0 chr2 25864163 25864255 -227392328 + MIR3 SINE MIR 4 110 -98 329 245 176 32 chr2 25864550 25864738 -227391845 + L2 LINE L2 3033 3247 -66 1844 152 14 0 chr2 25865001 25865297 -227391286 - AluJb SINE Alu -12 300 1 358 264 132 16 chr2 25865362 25865491 -227391092 - MIR SINE MIR -25 237 94 436 189 91 118 chr2 25865716 25865970 -227390613 - L1ME4a LINE L1 -58 6063 5817 908 202 13 70 chr2 25865979 25866207 -227390376 - AluJo SINE Alu -15 297 83 2395 95 0 0 chr2 25866219 25866524 -227390059 - AluSq SINE Alu -8 305 1 284 241 23 23 chr2 25866524 25866611 -227389972 - L1ME4a LINE L1 -292 5829 5743 1088 135 0 27 chr2 25866646 25866831 -227389752 - AluJb SINE Alu -1 311 132 1502 66 6 0 chr2 25866851 25867034 -227389549 + AluSp SINE Alu 1 184 -129 458 244 157 46 chr2 25867193 25867403 -227389180 - L2 LINE L2 -244 3069 2884 1416 93 132 10 chr2 25867403 25867497 -227389086 + MER30 DNA MER1_type 1 82 -148 198 71 0 0 chr2 25867497 25867525 -227389058 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1416 93 132 10 chr2 25867525 25867635 -227388948 + MER30 DNA MER1_type 82 230 0 458 244 157 46 chr2 25867635 25867756 -227388827 - L2 LINE L2 -429 2884 2698 455 209 0 0 chr2 25867763 25867854 -227388729 + L1MC3 LINE L1 7005 7095 -690 274 233 14 14 chr2 25867857 25867930 -227388653 + MLT1F1 LTR MaLR 36 108 -459 2323 129 73 5 chr2 25867930 25868326 -227388257 + L1MC3 LINE L1 7172 7594 -191 906 145 25 60 chr2 25868326 25868431 -227388152 + L1MC2 LINE L1 6137 6233 -111 1863 123 7 11 chr2 25868431 25868708 -227387875 + AluJb SINE Alu 11 286 -26 906 145 25 60 chr2 25868708 25868802 -227387781 + L1MC2 LINE L1 6233 6329 -15 209 333 0 0 chr2 25868808 25868880 -227387703 - L2 LINE L2 -615 2699 2628 * 337 262 170 2 chr2 25868845 25869022 -227387561 + MIR SINE MIR 16 222 -40 263 229 100 43 chr2 25869890 25870030 -227386553 - L1MC5 LINE L1 -53 7908 7761 697 260 18 18 chr2 25871553 25871722 -227384861 + MER5B DNA MER1_type 1 169 -9 392 350 85 5 chr2 25871958 25872158 -227384425 + MIR SINE MIR 47 262 0 377 288 31 50 chr2 25872893 25873072 -227383511 - MER5A DNA MER1_type 0 189 2 2355 81 0 19 chr2 25873449 25873758 -227382825 + AluSx SINE Alu 1 303 -9 223 278 158 62 chr2 25874776 25874985 -227381598 + L2 LINE L2 2809 3037 -235 469 269 60 81 chr2 25875052 25875262 -227381321 + MIR SINE MIR 34 260 -2 1821 139 3 70 chr2 25875442 25875758 -227380825 - AluJo SINE Alu -17 295 1 934 265 84 31 chr2 25875800 25876410 -227380173 - L1MEd LINE L1 -4723 1406 763 659 307 105 43 chr2 25876423 25876702 -227379881 - L1MEd LINE L1 -5427 692 381 2348 91 0 16 chr2 25876702 25877011 -227379572 - AluSx SINE Alu -8 304 1 659 307 105 43 chr2 25877011 25877122 -227379461 - L1MEd LINE L1 -5738 381 278 405 279 34 131 chr2 25877246 25877483 -227379100 + L2 LINE L2 2994 3207 -65 2587 50 0 7 chr2 25877597 25877897 -227378686 + AluY SINE Alu 4 301 -10 4637 210 83 20 chr2 25877913 25878778 -227377805 - L1ME2 LINE L1 -67 6097 5288 1966 97 8 0 chr2 25878778 25879036 -227377547 - AluY SINE Alu -4 307 48 4637 210 83 20 chr2 25879036 25879830 -227376753 - L1ME2 LINE L1 -876 5288 4278 1802 138 0 11 chr2 25879830 25880105 -227376478 - AluJb SINE Alu -17 295 24 4637 210 83 20 chr2 25880105 25880439 -227376144 - L1ME2 LINE L1 -1886 4278 3967 22 35 0 0 chr2 25882056 25882085 -227374498 + AT_rich Low_complexity Low_complexity 1 29 0 2335 97 0 10 chr2 25882887 25883196 -227373387 + AluY SINE Alu 1 306 -5 22 0 0 0 chr2 25884606 25884628 -227371955 + AT_rich Low_complexity Low_complexity 1 22 0 390 262 99 73 chr2 25885145 25885557 -227371026 - L1MC5 LINE L1 -27 7934 7512 2267 98 19 3 chr2 25885582 25885889 -227370694 - AluSx SINE Alu 0 312 1 1061 245 30 30 chr2 25885906 25886024 -227370559 - L1MC4a LINE L1 -898 6910 6793 2407 98 0 0 chr2 25886024 25886331 -227370252 - AluSx SINE Alu -5 307 1 1061 245 30 30 chr2 25886331 25886514 -227370069 - L1MC4a LINE L1 -1014 6794 6609 3574 107 11 52 chr2 25886593 25886868 -227369715 + MER75 DNA T2_type 2 246 -268 2254 98 0 3 chr2 25886868 25887154 -227369429 - AluSc SINE Alu -24 285 1 3574 107 11 52 chr2 25887154 25887413 -227369170 + MER75 DNA T2_type 246 514 0 1420 154 0 26 chr2 25887501 25887657 -227368926 - AluJb SINE Alu -23 289 131 225 0 0 0 chr2 25887657 25887682 -227368901 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2282 78 0 3 chr2 25887682 25887966 -227368617 - AluY SINE Alu -28 283 1 1420 154 0 26 chr2 25887966 25888041 -227368542 - AluJb SINE Alu -179 133 63 541 233 204 61 chr2 25888047 25888440 -227368143 - L1MDa LINE L1 -4785 1755 1320 2587 310 68 24 chr2 25888440 25888508 -227368075 - L2 LINE L2 -513 2801 2737 2296 117 0 0 chr2 25888508 25888815 -227367768 - AluSx SINE Alu -5 307 1 2587 310 68 24 chr2 25888815 25888847 -227367736 - L2 LINE L2 -577 2737 2708 907 110 0 16 chr2 25888847 25888974 -227367609 + FLAM_C SINE Alu 1 125 -8 2587 310 68 24 chr2 25888974 25889916 -227366667 - L2 LINE L2 -606 2708 1712 2219 107 0 19 chr2 25889917 25890225 -227366358 - AluSx SINE Alu -10 302 1 213 143 71 0 chr2 25890443 25890485 -227366098 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 209 249 121 91 chr2 25890667 25890832 -227365751 - L2 LINE L2 -23 3290 3121 289 291 27 27 chr2 25891114 25891224 -227365359 - MER5A DNA MER1_type -72 117 8 325 184 154 110 chr2 25891510 25891646 -227364937 + MIR SINE MIR 91 232 -30 2702 17 0 0 chr2 25891730 25892024 -227364559 - AluYa5 SINE Alu -17 294 1 1103 271 91 33 chr2 25892053 25892506 -227364077 + L2 LINE L2 2220 2698 -616 876 154 0 7 chr2 25892511 25892654 -227363929 + L1MB8 LINE L1 6037 6178 0 2449 174 191 104 chr2 25892673 25892919 -227363664 + L1MC3 LINE L1 6137 6360 -657 2000 116 3 29 chr2 25892919 25893230 -227363353 - AluSx SINE Alu -9 303 1 2449 174 191 104 chr2 25893230 25893574 -227363009 + L1MC3 LINE L1 6360 6672 -345 264 284 39 59 chr2 25893574 25893676 -227362907 + MLT1F1 LTR MaLR 35 134 -433 2449 174 191 104 chr2 25893676 25894115 -227362468 + L1MC3 LINE L1 6672 6925 -92 2491 73 0 6 chr2 25894115 25894428 -227362155 + AluY SINE Alu 1 311 0 2449 174 191 104 chr2 25894428 25894530 -227362053 + L1MC3 LINE L1 6925 7017 0 1336 302 70 16 chr2 25894546 25895030 -227361553 + L2 LINE L2 2804 3313 0 2169 111 10 10 chr2 25895075 25895381 -227361202 + AluSx SINE Alu 1 306 -6 224 242 76 30 chr2 25895415 25895481 -227361102 - MIR SINE MIR -173 89 21 180 353 130 55 chr2 25896155 25896501 -227360082 - L2 LINE L2 -92 3180 2809 544 187 97 58 chr2 25896558 25896618 -227359965 - MER3 DNA MER1_type -17 192 136 2092 133 0 7 chr2 25896618 25896919 -227359664 + AluSq SINE Alu 1 299 -14 544 187 97 58 chr2 25896919 25897013 -227359570 - MER3 DNA MER1_type -73 136 32 254 308 42 50 chr2 25897038 25897158 -227359425 - L2 LINE L2 -560 2754 2636 255 265 15 0 chr2 25897869 25897937 -227358646 + L2 LINE L2 2323 2391 -923 16494 119 21 14 chr2 25898665 25900087 -227356496 + Tigger1 DNA MER2_type 1 1450 -968 2173 107 20 3 chr2 25900087 25900385 -227356198 - AluSq SINE Alu -10 303 1 16494 119 21 14 chr2 25900385 25901362 -227355221 + Tigger1 DNA MER2_type 1450 2418 0 643 237 28 47 chr2 25901889 25902100 -227354483 - HAL1 LINE L1 -2256 251 45 961 122 7 0 chr2 25902541 25902680 -227353903 - FAM SINE Alu -5 44 1 461 231 113 19 chr2 25905057 25905138 -227351445 - MIR SINE MIR -67 195 123 2002 128 3 32 chr2 25905138 25905450 -227351133 + AluSx SINE Alu 1 303 -9 461 231 113 19 chr2 25905450 25905528 -227351055 - MIR SINE MIR -139 123 21 323 276 84 34 chr2 25905748 25905911 -227350672 - MER5A DNA MER1_type -8 181 1 1340 109 63 225 chr2 25907855 25908269 -227348314 + MER7A DNA MER2_type 1 345 -1 32 0 0 0 chr2 25909181 25909213 -227347370 + AT_rich Low_complexity Low_complexity 1 32 0 821 155 9 0 chr2 25909213 25909329 -227347254 - FLAM_C SINE Alu -25 118 2 1199 119 4 132 chr2 25909803 25909864 -227346719 + AluJo SINE Alu 88 155 -157 2265 99 0 0 chr2 25909864 25910184 -227346399 + AluSg SINE Alu 1 320 0 1199 119 4 132 chr2 25910184 25910198 -227346385 + AluJo SINE Alu 155 169 -143 1784 164 3 10 chr2 25910198 25910502 -227346081 + AluJo SINE Alu 1 302 -10 1199 119 4 132 chr2 25910502 25910667 -227345916 + AluJo SINE Alu 169 299 -13 1144 217 68 32 chr2 25911262 25911571 -227345012 - MER2 DNA MER2_type -25 320 1 253 241 111 46 chr2 25912014 25912122 -227344461 - MER5A DNA MER1_type -6 183 69 293 306 51 88 chr2 25912163 25912617 -227343966 - L2 LINE L2 -653 2661 2225 2114 114 7 7 chr2 25912670 25912967 -227343616 - AluSx SINE Alu -15 297 1 274 194 113 0 chr2 25913313 25913375 -227343208 - L2 LINE L2 -1 3312 3244 723 221 0 8 chr2 25913553 25913684 -227342899 + FLAM_A SINE Alu 1 130 -3 337 242 39 39 chr2 25913878 25914006 -227342577 + L1 LINE L1 5265 5392 -754 1883 167 0 0 chr2 25914010 25914292 -227342291 + AluJo SINE Alu 1 282 -30 960 267 12 18 chr2 25914416 25914749 -227341834 + L1ME4a LINE L1 5538 5868 -253 234 330 55 0 chr2 25914777 25914868 -227341715 - MIR SINE MIR -1 261 166 363 23 0 0 chr2 25915154 25915198 -227341385 + (CA)n Simple_repeat Simple_repeat 1 44 0 198 208 0 0 chr2 25915198 25915246 -227341337 + GA-rich Low_complexity Low_complexity 3 50 0 314 308 164 0 chr2 25915396 25915500 -227341083 + L2 LINE L2 3141 3261 -11 826 220 62 50 chr2 25915803 25916062 -227340521 - MIR SINE MIR 0 262 1 1565 165 61 11 chr2 25916610 25916889 -227339694 + AluJb SINE Alu 1 293 -19 216 310 90 10 chr2 25917743 25917843 -227338740 - L2 LINE L2 -12 3260 3153 200 340 174 0 chr2 25918132 25918276 -227338307 - MIR SINE MIR -10 252 84 1945 154 3 3 chr2 25919097 25919396 -227337187 - AluJb SINE Alu -13 299 1 2276 110 3 0 chr2 25920592 25920891 -227335692 + AluSx SINE Alu 1 300 -12 570 203 23 30 chr2 25922724 25922857 -227333726 - AluSg1 SINE Alu -176 133 2 1089 148 0 23 chr2 25923865 25924041 -227332542 - AluJo/FRAM SINE Alu -7 305 134 1836 142 35 10 chr2 25924041 25924329 -227332254 - AluSx SINE Alu -16 296 2 278 218 79 74 chr2 25924374 25924561 -227332022 + L1MDa LINE L1 1543 1726 -4814 1728 182 7 3 chr2 25924561 25924890 -227331693 + AluJb SINE Alu 1 312 0 278 218 79 74 chr2 25924890 25924926 -227331657 + L1MDa LINE L1 1726 1760 -4780 884 159 34 193 chr2 25925062 25925108 -227331475 + L1M4 LINE L1 4136 4188 -1958 1856 142 3 60 chr2 25925108 25925259 -227331324 + AluJb SINE Alu 1 124 -188 2176 109 13 10 chr2 25925259 25925562 -227331021 + AluY SINE Alu 1 304 -7 1856 142 3 60 chr2 25925562 25925741 -227330842 + AluJb SINE Alu 124 312 0 884 159 34 193 chr2 25925741 25925865 -227330718 + L1M4 LINE L1 4188 4330 -1816 1731 170 7 17 chr2 25925865 25926159 -227330424 + AluJo SINE Alu 1 291 -21 884 159 34 193 chr2 25926159 25926290 -227330293 + L1M4 LINE L1 4330 4377 -1769 2444 69 0 10 chr2 25926290 25926594 -227329989 + AluY SINE Alu 1 301 -10 884 159 34 193 chr2 25926594 25926642 -227329941 + L1M4 LINE L1 4377 4431 -1715 1966 136 0 0 chr2 25926643 25926916 -227329667 + AluSx SINE Alu 1 273 -39 229 182 0 0 chr2 25926916 25926960 -227329623 + GA-rich Low_complexity Low_complexity 1 44 0 966 138 6 11 chr2 25926960 25927141 -227329442 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 572 138 13 38 chr2 25927147 25927306 -227329277 + GA-rich Low_complexity Low_complexity 2 156 0 1065 208 80 13 chr2 25927311 25927624 -227328959 + L1M4 LINE L1 4416 4749 -1397 2568 118 66 9 chr2 25928586 25929011 -227327572 + L1MA4A LINE L1 5762 6210 -93 1921 105 19 0 chr2 25929020 25929277 -227327306 - L1PA12 LINE L1 0 6168 5907 658 106 0 0 chr2 25929277 25929371 -227327212 + L1MA4A LINE L1 6204 6297 -6 264 236 42 0 chr2 25929757 25929829 -227326754 + L2 LINE L2 2196 2270 -1044 1350 270 163 22 chr2 25929976 25930928 -227325655 + L2 LINE L2 2229 3311 -2 525 184 48 24 chr2 25930968 25931093 -227325490 + MER97a DNA MER1_type? 767 894 0 320 197 0 0 chr2 25931093 25931154 -227325429 - L1M4 LINE L1 -1609 4537 4477 2304 103 3 0 chr2 25931192 25931494 -227325089 - AluSp SINE Alu -10 303 1 2186 219 30 16 chr2 25931498 25932059 -227324524 - L1M4 LINE L1 -1661 4485 3917 509 302 80 24 chr2 25932063 25932401 -227324182 - L1MEc LINE L1 -4653 1743 1387 2287 120 0 3 chr2 25932404 25932712 -227323871 - AluSx SINE Alu -5 307 1 545 297 114 67 chr2 25932850 25933165 -227323418 - L1MEc LINE L1 -5138 1067 719 2398 95 0 3 chr2 25933165 25933470 -227323113 - AluSx SINE Alu -8 304 1 545 297 114 67 chr2 25933470 25933645 -227322938 - L1MEc LINE L1 -5486 719 554 2245 98 3 0 chr2 25934003 25934290 -227322293 - AluSq SINE Alu -21 292 5 239 406 30 0 chr2 25935536 25935669 -227320914 - L2 LINE L2 -461 2853 2717 2039 122 6 34 chr2 25936103 25936424 -227320159 + AluSx SINE Alu 1 312 0 234 311 111 0 chr2 25936547 25936637 -227319946 - L2 LINE L2 -2 3311 3212 1093 321 45 3 chr2 25936663 25937142 -227319441 - L2 LINE L2 -77 3236 2740 2022 106 20 17 chr2 25937345 25937646 -227318937 - AluSx SINE Alu -10 302 1 1460 190 97 15 chr2 25937892 25938234 -227318349 + L1MD3 LINE L1 4568 4937 -1209 2059 85 44 4 chr2 25938236 25938540 -227318043 - AluSq SINE Alu 0 315 1 1249 215 13 16 chr2 25938550 25938910 -227317673 + L1MD3 LINE L1 5267 7993 -2 1158 157 0 30 chr2 25938910 25939107 -227317476 - AluJb SINE Alu -12 300 110 2283 106 0 3 chr2 25939232 25939534 -227317049 + AluSq SINE Alu 1 301 -12 2244 210 61 9 chr2 25939534 25940078 -227316505 + L1ME1 LINE L1 5595 6166 0 * 3457 141 63 91 chr2 25940069 25940850 -227315733 + L1MB2 LINE L1 5413 6171 0 294 148 0 0 chr2 25941201 25941255 -227315328 + (CA)n Simple_repeat Simple_repeat 2 55 0 1721 173 3 7 chr2 25941706 25941989 -227314594 + AluJo SINE Alu 1 282 -30 192 97 0 0 chr2 25941992 25942023 -227314560 + (T)n Simple_repeat Simple_repeat 1 31 0 1391 137 48 9 chr2 25942139 25942366 -227314217 - MER46A DNA MER2_type 0 236 1 1917 108 37 0 chr2 25942726 25943015 -227313568 + AluSg SINE Alu 1 299 0 1304 201 112 29 chr2 25943857 25944011 -227312572 - MER58B DNA MER1_type -2079 341 201 1624 154 50 40 chr2 25944011 25944310 -227312273 - AluSx SINE Alu -10 302 1 1304 201 112 29 chr2 25944310 25944469 -227312114 - MER58B DNA MER1_type -2219 201 2 428 276 78 0 chr2 25945058 25945174 -227311409 - L2 LINE L2 0 3313 3189 186 236 90 22 chr2 25945235 25945324 -227311259 - MIR SINE MIR -50 212 118 2332 110 0 0 chr2 25945326 25945625 -227310958 - AluSx SINE Alu -13 299 1 222 206 191 0 chr2 25945880 25945943 -227310640 + L2 LINE L2 3198 3272 0 2123 132 0 3 chr2 25945982 25946286 -227310297 + AluSx SINE Alu 1 303 -9 232 287 54 100 chr2 25946403 25946522 -227310061 - MER5B DNA MER1_type 0 189 63 2447 82 3 0 chr2 25946522 25946825 -227309758 - AluSp SINE Alu -9 304 1 232 287 54 100 chr2 25946825 25946881 -227309702 - MER5B DNA MER1_type -126 63 6 240 224 20 0 chr2 25946920 25946969 -227309614 - L3 LINE CR1 -8 1569 1520 340 301 32 38 chr2 25947354 25947534 -227309049 + MLT1J2 LTR MaLR 263 401 -8 339 226 104 0 chr2 25947595 25947701 -227308882 + L1ME LINE L1 5688 5804 -366 2198 99 31 0 chr2 25947985 25948279 -227308304 + AluSq SINE Alu 1 303 -10 428 296 48 77 chr2 25948469 25948821 -227307762 + HAL1 LINE L1 294 635 -1872 375 41 0 0 chr2 25948970 25949019 -227307564 + (TA)n Simple_repeat Simple_repeat 1 49 0 2205 120 0 7 chr2 25949019 25949318 -227307265 - AluSq SINE Alu -16 297 1 2768 259 66 83 chr2 25949530 25949866 -227306717 + L1M4 LINE L1 2742 3082 -3064 2241 100 7 3 chr2 25949866 25950165 -227306418 + AluSc SINE Alu 3 302 -7 2768 259 66 83 chr2 25950165 25951318 -227305265 + L1M4 LINE L1 3082 4370 -1776 311 216 14 0 chr2 25951318 25951392 -227305191 + L1MB7 LINE L1 6099 6173 -11 2768 259 66 83 chr2 25951392 25952144 -227304439 + L1M4 LINE L1 4370 5134 -1012 295 287 96 22 chr2 25952475 25952611 -227303972 + HAL1b LINE L1 746 891 -457 28 0 0 0 chr2 25952634 25952662 -227303921 + AT_rich Low_complexity Low_complexity 1 28 0 1963 135 3 7 chr2 25952779 25953068 -227303515 + AluJb SINE Alu 1 288 -24 333 279 184 5 chr2 25953079 25953269 -227303314 + HAL1 LINE L1 2283 2506 -1 2122 138 7 0 chr2 25954589 25954894 -227301689 + AluSp SINE Alu 1 307 -6 1753 164 3 13 chr2 25955666 25955970 -227300613 + AluJb SINE Alu 1 301 -11 208 239 45 45 chr2 25956137 25956204 -227300379 + L2 LINE L2 2714 2780 -534 5808 107 35 36 chr2 25956722 25957678 -227298905 - SVA Other Other 0 1386 432 4831 111 45 29 chr2 25957710 25959491 -227297092 - SVA Other Other -518 868 1 2069 87 0 0 chr2 25959505 25959769 -227296814 - AluSc SINE Alu -45 264 1 1719 150 3 72 chr2 25960829 25961136 -227295447 + AluJo SINE Alu 1 286 -26 2166 110 3 0 chr2 25961184 25961474 -227295109 - AluSq SINE Alu -18 295 5 233 227 72 0 chr2 25961730 25961807 -227294776 - L1ME LINE L1 -263 5886 5808 261 0 8 0 chr2 25961826 25961894 -227294689 + (T)n Simple_repeat Simple_repeat 1 29 0 1422 252 103 32 chr2 25961933 25963216 -227293367 - L1ME LINE L1 -371 5782 4388 267 164 0 18 chr2 25963248 25963303 -227293280 - L1MB2 LINE L1 0 6171 6118 180 0 0 0 chr2 25963303 25963323 -227293260 + (TTA)n Simple_repeat Simple_repeat 2 21 0 298 118 59 0 chr2 25963323 25963374 -227293209 - AluJ/FRAM SINE Alu -17 285 232 4523 27 8 0 chr2 25963392 25963881 -227292702 + SVA Other Other 891 1383 -3 2241 103 6 10 chr2 25964026 25964338 -227292245 + AluSx SINE Alu 1 311 -1 438 201 86 72 chr2 25964353 25964492 -227292091 - L1MB2 LINE L1 -61 6110 5970 * 1457 184 4 0 chr2 25964486 25964730 -227291853 - L1MB2 LINE L1 -413 5758 5514 335 318 71 24 chr2 25964738 25964908 -227291675 - L1ME LINE L1 -2020 4109 3932 860 114 0 0 chr2 25964944 25965067 -227291516 - AluSg/x SINE Alu -12 298 176 815 280 78 33 chr2 25965080 25965622 -227290961 - L1ME LINE L1 -2204 3925 3360 375 248 50 19 chr2 25965956 25966117 -227290466 - L1ME LINE L1 -3762 2367 2202 2353 97 7 0 chr2 25966123 25966433 -227290150 - AluSx SINE Alu 0 312 1 24 0 0 0 chr2 25967681 25967705 -227288878 + AT_rich Low_complexity Low_complexity 1 24 0 325 312 69 6 chr2 25967792 25967979 -227288604 - L1MDa LINE L1 -762 2139 1852 * 505 243 61 42 chr2 25967959 25968173 -227288410 - L1MDa LINE L1 -5007 1523 1306 603 219 0 34 chr2 25968459 25968587 -227287996 + MER3 DNA MER1_type 1 125 -37 2107 108 35 0 chr2 25968587 25968875 -227287708 - AluSx SINE Alu -14 298 1 603 219 0 34 chr2 25968875 25968892 -227287691 + MER3 DNA MER1_type 125 141 -68 1948 179 66 34 chr2 25968895 25969335 -227287248 + MER101 LTR ERV1 11 464 -10 318 345 74 5 chr2 25969350 25969553 -227287030 - L1MDa LINE L1 -5664 866 650 1649 204 0 10 chr2 25969794 25970102 -227286481 - AluJo SINE Alu -7 305 1 696 268 111 90 chr2 25970122 25970268 -227286315 - L1 LINE L1 -2307 3839 3697 1923 114 7 4 chr2 25970268 25970541 -227286042 - AluSq SINE Alu -2 311 38 696 268 111 90 chr2 25970541 25971424 -227285159 - L1 LINE L1 -2449 3697 2789 1188 261 52 17 chr2 25971433 25971827 -227284756 - L2 LINE L2 -294 3019 2611 28 48 0 0 chr2 25972005 25972047 -227284536 + AT_rich Low_complexity Low_complexity 1 42 0 204 242 15 0 chr2 25972158 25972224 -227284359 + (TA)n Simple_repeat Simple_repeat 1 67 0 1820 129 0 0 chr2 25972667 25972915 -227283668 - AluJb SINE Alu -64 248 1 1924 123 0 0 chr2 25973383 25973643 -227282940 - AluSx SINE Alu -52 260 1 499 296 64 20 chr2 25973654 25973904 -227282679 - L1ME LINE L1 -4943 1176 916 403 337 111 23 chr2 25974465 25974726 -227281857 - L1MEd LINE L1 -4946 1173 890 24 32 0 0 chr2 25975494 25975525 -227281058 + AT_rich Low_complexity Low_complexity 1 31 0 2556 7 0 0 chr2 25975538 25975812 -227280771 - AluYb8 SINE Alu -5 313 40 748 130 0 0 chr2 25975819 25975919 -227280664 - FLAM_A SINE Alu -18 124 25 2288 71 7 19 chr2 25976206 25976514 -227280069 + AluSq SINE Alu 1 304 -9 713 271 148 16 chr2 25977206 25977572 -227279011 + L1ME2 LINE L1 5524 5940 -224 2373 83 17 0 chr2 25977766 25978067 -227278516 + AluY SINE Alu 1 306 -5 257 214 36 0 chr2 25978364 25978420 -227278163 - L1ME4a LINE L1 -195 5926 5869 2167 131 0 13 chr2 25978485 25978799 -227277784 + AluSx SINE Alu 1 310 -2 364 309 81 94 chr2 25978810 25979182 -227277401 - L1MC4a LINE L1 -1976 5832 5466 2246 93 3 17 chr2 25980025 25980325 -227276258 - AluSc SINE Alu -9 300 5 280 304 5 22 chr2 25980495 25980586 -227275997 + MIR SINE MIR 59 149 -73 689 236 18 12 chr2 25980589 25980754 -227275829 + Charlie1 DNA MER1_type 2 167 -2594 2229 156 44 11 chr2 25980757 25981067 -227275516 + Charlie1 DNA MER1_type 2312 2641 -120 2151 114 10 0 chr2 25981067 25981364 -227275219 - AluSx SINE Alu -12 300 1 2229 156 44 11 chr2 25981364 25981488 -227275095 + Charlie1 DNA MER1_type 2641 2760 -1 2372 93 3 13 chr2 25982736 25983047 -227273536 + AluSx SINE Alu 1 308 -4 191 237 155 31 chr2 25983049 25983146 -227273437 - L2 LINE L2 0 3313 3205 864 204 19 0 chr2 25983371 25983533 -227273050 + L1MC/D LINE L1 5398 5562 -2246 2611 208 52 81 chr2 25984353 25984877 -227271706 - HsTC2c DNA MER2_type -1169 729 232 2300 92 3 0 chr2 25984877 25985170 -227271413 - AluSc SINE Alu -15 294 1 2611 208 52 81 chr2 25985170 25985394 -227271189 - HsTC2c DNA MER2_type -1666 232 3 180 322 23 46 chr2 25985423 25985510 -227271073 + L3b LINE CR1 1410 1494 -89 208 252 59 74 chr2 25986228 25986363 -227270220 - MER5B DNA MER1_type -45 133 1 1302 261 195 46 chr2 25987622 25988253 -227268330 + L2 LINE L2 1 725 -2589 732 214 112 96 chr2 25988253 25988576 -227268007 + MLT1D LTR MaLR 2 329 -176 2150 109 20 13 chr2 25988605 25988909 -227267674 + AluSx SINE Alu 1 306 -6 1665 244 54 46 chr2 25988909 25989413 -227267170 + MLT2B1 LTR ERVL 13 520 0 342 314 114 7 chr2 25989413 25989553 -227267030 + MLT1D LTR MaLR 313 467 0 1024 272 107 33 chr2 25989572 25990058 -227266525 + L2 LINE L2 733 1254 -2060 328 258 0 0 chr2 25990047 25990113 -227266470 + L2 LINE L2 3005 3070 -243 * 2582 148 29 5 chr2 25990135 25990546 -227266037 + MSTB LTR MaLR 1 421 -5 4420 163 28 37 chr2 25990547 25991404 -227265179 - L1MB7 LINE L1 -19 6165 5317 1995 145 10 0 chr2 25991416 25991712 -227264871 - AluSx SINE Alu -13 299 1 945 128 122 17 chr2 25991729 25991909 -227264674 - L1MB2 LINE L1 -12 6159 5961 6325 199 42 41 chr2 25991911 25992524 -227264059 - L1MB7 LINE L1 -814 5332 4721 2128 73 0 38 chr2 25992524 25992811 -227263772 - AluY SINE Alu -3 308 33 6325 199 42 41 chr2 25992811 25993017 -227263566 - L1MB7 LINE L1 -1425 4721 4517 2149 128 0 22 chr2 25993017 25993330 -227263253 - AluSx SINE Alu -6 306 1 6325 199 42 41 chr2 25993330 25993509 -227263074 - L1MB7 LINE L1 -1629 4517 4340 595 90 13 0 chr2 25993509 25993587 -227262996 - MADE1 DNA Mariner -1 79 1 6325 199 42 41 chr2 25993587 25993882 -227262701 - L1MB7 LINE L1 -1806 4340 4047 1565 149 17 61 chr2 25993882 25994178 -227262405 - AluJb SINE Alu -18 294 12 6325 199 42 41 chr2 25994178 25994468 -227262115 - L1MB7 LINE L1 -2099 4047 3744 1078 230 201 94 chr2 25994559 25995146 -227261437 + MLT1E3 LTR MaLR 5 624 0 601 238 32 0 chr2 25995146 25995272 -227261311 - MER94 DNA DNA -4 130 1 386 350 38 0 chr2 25995356 25995516 -227261067 - L2 LINE L2 -2881 433 268 237 171 118 53 chr2 25995658 25995734 -227260849 - MER4D LTR ERV1 -68 804 724 2368 94 3 0 chr2 25996523 25996831 -227259752 + AluSc SINE Alu 1 309 0 1115 92 0 13 chr2 25996838 25996991 -227259592 + L1MB3 LINE L1 6028 6178 -5 814 255 109 39 chr2 25997379 25997952 -227258631 + MLT1G LTR MaLR 22 590 0 2361 82 7 0 chr2 25998460 25998764 -227257819 + AluSq SINE Alu 1 306 -7 1609 171 40 20 chr2 25998775 25999079 -227257504 + AluJb SINE Alu 1 310 -2 1898 206 122 36 chr2 25999113 25999646 -227256937 + L2 LINE L2 1775 2353 -961 2502 60 0 0 chr2 26000020 26000318 -227256265 + AluY SINE Alu 1 298 -13 370 231 8 142 chr2 26000736 26000781 -227255802 + MER5B DNA MER1_type 1 50 -128 2259 74 7 23 chr2 26000781 26001080 -227255503 - AluSq SINE Alu -19 294 1 370 231 8 142 chr2 26001080 26001168 -227255415 + MER5B DNA MER1_type 50 116 -62 532 281 152 33 chr2 26001673 26002036 -227254547 - MLT1J2 LTR MaLR -44 406 1 536 232 8 8 chr2 26002038 26002163 -227254420 + L2 LINE L2 3189 3313 0 274 186 0 17 chr2 26002758 26002817 -227253766 + L1ME3A LINE L1 6113 6170 0 2596 58 0 10 chr2 26004051 26004362 -227252221 - AluY SINE Alu -3 308 1 30 0 0 0 chr2 26004676 26004706 -227251877 + AT_rich Low_complexity Low_complexity 1 30 0 198 0 0 0 chr2 26004706 26004728 -227251855 + (C)n Simple_repeat Simple_repeat 1 22 0 1848 165 0 7 chr2 26005088 26005397 -227251186 + AluSx SINE Alu 1 307 0 2408 84 10 0 chr2 26005656 26005964 -227250619 + AluSp SINE Alu 1 311 -2 1234 141 0 0 chr2 26008014 26008191 -227248392 + AluSg/x SINE Alu 120 296 -16 326 188 71 35 chr2 26008884 26008969 -227247614 + L2 LINE L2 3169 3256 -16 1995 130 42 0 chr2 26010634 26010919 -227245664 + AluSg SINE Alu 1 297 -13 2370 76 30 0 chr2 26011266 26011569 -227245014 - AluSx SINE Alu 0 312 1 7950 157 88 46 chr2 26011652 26013337 -227243246 - MER52A LTR ERV1 0 1755 1 474 243 34 20 chr2 26013634 26013676 -227242907 - L1MC5 LINE L1 -58 7903 7863 2375 101 0 0 chr2 26013676 26013983 -227242600 + AluSx SINE Alu 1 307 -5 474 243 34 20 chr2 26013983 26014088 -227242495 - L1MC5 LINE L1 -98 7863 7754 239 240 193 33 chr2 26014126 26014276 -227242307 - L1ME LINE L1 -410 5754 5581 21 82 0 0 chr2 26014472 26014521 -227242062 + AT_rich Low_complexity Low_complexity 1 49 0 408 156 21 10 chr2 26016567 26016663 -227239920 - L1MC4 LINE L1 0 8042 7946 2523 196 55 10 chr2 26016664 26017287 -227239296 - L1MC4 LINE L1 -170 7872 7222 1440 139 0 43 chr2 26019029 26019259 -227237324 + AluJb SINE Alu 85 304 -8 260 283 25 82 chr2 26019622 26019781 -227236802 - L2 LINE L2 -4 3309 3160 933 246 49 92 chr2 26019886 26020377 -227236206 + MLT1J LTR MaLR 34 503 -8 199 343 71 10 chr2 26020396 26020495 -227236088 - MIR SINE MIR -144 118 14 187 405 41 23 chr2 26020940 26021160 -227235423 - L2 LINE L2 -660 2654 2431 2357 82 7 0 chr2 26021245 26021537 -227235046 - AluY SINE Alu -17 294 1 1907 151 0 10 chr2 26021711 26022009 -227234574 + AluJo SINE Alu 1 295 -17 285 286 100 56 chr2 26022256 26022487 -227234096 + MLT1L LTR MaLR 241 583 -30 35 24 0 0 chr2 26023076 26023118 -227233465 + AT_rich Low_complexity Low_complexity 1 42 0 2280 119 0 0 chr2 26023737 26024047 -227232536 + AluSx SINE Alu 1 310 -2 28 0 0 0 chr2 26024604 26024632 -227231951 + AT_rich Low_complexity Low_complexity 1 28 0 531 244 132 12 chr2 26024744 26024994 -227231589 - L1ME4a LINE L1 -290 5831 5552 216 97 0 0 chr2 26026071 26026102 -227230481 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1628 189 6 43 chr2 26026294 26026483 -227230100 - AluJo SINE Alu -1 311 137 2136 114 30 0 chr2 26026483 26026782 -227229801 - AluSx SINE Alu -4 308 1 1628 189 6 43 chr2 26026782 26026915 -227229668 - AluJo SINE Alu -175 137 1 22 35 0 0 chr2 26027728 26027757 -227228826 + AT_rich Low_complexity Low_complexity 1 29 0 271 168 99 59 chr2 26028014 26028115 -227228468 + L1MC5 LINE L1 7275 7379 -582 387 268 39 16 chr2 26028364 26028491 -227228092 + MIR SINE MIR 118 247 -15 745 296 101 56 chr2 26030697 26031123 -227225460 + LTR67 LTR ERVL 113 557 0 2248 98 14 0 chr2 26031213 26031508 -227225075 + AluSp SINE Alu 1 299 -14 459 0 0 0 chr2 26031554 26031605 -227224978 + (CA)n Simple_repeat Simple_repeat 2 52 0 572 246 32 8 chr2 26031610 26031736 -227224847 - MER5B DNA MER1_type -49 129 1 346 244 78 34 chr2 26031757 26031914 -227224669 + L1MC4a LINE L1 5288 5444 -730 1135 159 0 0 chr2 26031996 26032172 -227224411 - AluJb SINE Alu -1 311 136 1164 196 51 106 chr2 26032387 26032612 -227223971 - L1ME3A LINE L1 0 6170 5981 2228 119 0 0 chr2 26032612 26032906 -227223677 - AluSx SINE Alu -18 294 1 1164 196 51 106 chr2 26032906 26033133 -227223450 - L1ME3A LINE L1 -189 5981 5743 446 175 11 7 chr2 26033322 26033415 -227223168 + MER2 DNA MER2_type 1 89 -150 727 192 8 0 chr2 26033595 26033720 -227222863 + FLAM_A SINE Alu 2 127 -6 387 145 36 24 chr2 26033998 26034081 -227222502 + L1MC4a LINE L1 5680 5763 -2045 341 302 114 41 chr2 26034088 26034333 -227222250 + L1MC4a LINE L1 5813 6075 -1733 1561 244 55 24 chr2 26034360 26034979 -227221604 + L1M4 LINE L1 3015 3652 -2494 186 43 0 0 chr2 26035007 26035030 -227221553 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 751 179 0 0 chr2 26035030 26035147 -227221436 - AluJb SINE Alu -193 119 3 2067 96 3 3 chr2 26035149 26035440 -227221143 - L1PA16 LINE L1 -12 6154 5864 2005 257 86 19 chr2 26035440 26035578 -227221005 + L1M4 LINE L1 3639 3766 -2380 2236 117 0 0 chr2 26035578 26035886 -227220697 + AluSg SINE Alu 1 308 -2 2005 257 86 19 chr2 26035886 26036643 -227219940 + L1M4 LINE L1 3766 4594 -1552 180 0 0 0 chr2 26036665 26036685 -227219898 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3462 194 70 15 chr2 26036685 26037467 -227219116 - MER21B LTR ERV1 -19 844 20 390 179 26 13 chr2 26037569 26037647 -227218936 - MER21B LTR ERV1 -773 90 12 189 319 0 0 chr2 26037815 26037862 -227218721 - MER5B DNA MER1_type -129 49 3 2618 55 0 0 chr2 26038551 26038862 -227217721 + AluY SINE Alu 1 311 0 1713 156 52 10 chr2 26039511 26039799 -227216784 + AluSx SINE Alu 1 300 -12 2486 80 0 0 chr2 26041660 26041962 -227214621 + AluSg SINE Alu 1 302 -8 757 167 15 0 chr2 26042586 26042718 -227213865 + AluJo SINE Alu 1 134 -178 1051 149 0 18 chr2 26042774 26042942 -227213641 + AluJo SINE Alu 131 295 -17 203 59 0 29 chr2 26043245 26043279 -227213304 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2178 81 23 55 chr2 26043347 26043657 -227212926 - AluSp SINE Alu -13 300 1 1782 131 15 15 chr2 26044098 26044365 -227212218 + AluSx SINE Alu 1 267 -45 305 172 0 92 chr2 26044369 26044456 -227212127 - MER115 DNA AcHobo -106 587 509 539 291 34 0 chr2 26044490 26044638 -227211945 - MER115 DNA AcHobo -253 440 288 309 345 108 14 chr2 26044743 26045039 -227211544 + L1M4 LINE L1 1263 1586 -4956 354 297 34 0 chr2 26045468 26045586 -227210997 + L1MEd LINE L1 636 757 -5448 2616 124 120 22 chr2 26045753 26046245 -227210338 + MER4B LTR ERV1 1 540 -70 216 0 0 0 chr2 26047452 26047476 -227209107 + (T)n Simple_repeat Simple_repeat 1 24 0 1847 181 37 3 chr2 26047676 26048025 -227208558 + MLT1A1 LTR MaLR 1 361 -4 676 183 17 0 chr2 26048383 26048503 -227208080 + FLAM_A SINE Alu 1 122 -11 2314 92 3 7 chr2 26049031 26049334 -227207249 + AluSp SINE Alu 1 302 -11 2316 102 0 0 chr2 26049631 26049936 -227206647 - AluY SINE Alu -6 305 1 259 258 71 32 chr2 26051035 26051190 -227205393 + L1MEd LINE L1 1514 1674 -4722 363 329 95 33 chr2 26051252 26051526 -227205057 + L1MEd LINE L1 2166 2456 -3940 796 212 10 5 chr2 26051552 26051755 -227204828 + L1MB7 LINE L1 3882 4085 -2061 * 4126 160 34 34 chr2 26051751 26052457 -227204126 + L1MB7 LINE L1 5100 5809 -375 2409 80 3 19 chr2 26052457 26052768 -227203815 + AluSp SINE Alu 1 306 -7 4126 160 34 34 chr2 26052768 26053120 -227203463 + L1MB7 LINE L1 5809 6159 -25 713 265 17 80 chr2 26053152 26053207 -227203376 + L1MEd LINE L1 2454 2511 -3704 1358 206 78 27 chr2 26053207 26053503 -227203080 + AluJo SINE Alu 1 311 -1 713 265 17 80 chr2 26053503 26053813 -227202770 + L1MEd LINE L1 2511 2779 -3436 2256 112 7 0 chr2 26053813 26054118 -227202465 + AluSx SINE Alu 1 307 -5 713 265 17 80 chr2 26054118 26054276 -227202307 + L1MEd LINE L1 2779 2945 -3270 690 267 83 56 chr2 26054281 26054306 -227202277 + L1MEd LINE L1 4049 4072 -2143 2360 155 46 12 chr2 26054306 26054720 -227201863 + MSTC LTR MaLR 1 428 0 690 267 83 56 chr2 26054720 26055059 -227201524 + L1MEd LINE L1 4072 4400 -1815 261 0 0 0 chr2 26055059 26055088 -227201495 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 8350 21 0 293 chr2 26055088 26056971 -227199612 + SVA Other Other 53 1383 -3 690 267 83 56 chr2 26056971 26057051 -227199532 + L1MEd LINE L1 4400 4476 -1739 2001 119 26 19 chr2 26057051 26057361 -227199222 + AluSx SINE Alu 1 312 0 690 267 83 56 chr2 26057361 26057524 -227199059 + L1MEd LINE L1 4476 4676 -1539 229 175 53 0 chr2 26057528 26057585 -227198998 + L1ME1 LINE L1 6106 6165 -1 477 208 15 128 chr2 26057620 26057885 -227198698 + L1MEd LINE L1 4685 4919 -1296 341 279 32 45 chr2 26058151 26058305 -227198278 + L1MEd LINE L1 4969 5120 -1095 229 141 71 71 chr2 26058424 26058509 -227198074 + MER112 DNA MER1_type 1 85 -175 301 277 65 43 chr2 26058568 26058752 -227197831 + MER112 DNA MER1_type 67 254 -6 186 311 0 151 chr2 26058875 26058929 -227197654 - MIR SINE MIR -99 109 77 7415 41 1 0 chr2 26058929 26060268 -227196315 + L1PA5 LINE L1 4812 6151 -3 186 311 0 151 chr2 26060268 26060319 -227196264 - MIR SINE MIR -131 77 20 204 182 0 0 chr2 26060432 26060476 -227196107 + (CA)n Simple_repeat Simple_repeat 2 45 0 188 284 17 97 chr2 26061305 26061481 -227195102 + MIR3 SINE MIR 20 181 -27 890 293 87 54 chr2 26061483 26062001 -227194582 + MLT1G1 LTR MaLR 1 535 -60 568 191 0 0 chr2 26062530 26062619 -227193964 + AluJ/FLAM SINE Alu 3 91 -221 2045 55 0 0 chr2 26062625 26062860 -227193723 + AluY SINE Alu 1 235 -76 189 0 0 0 chr2 26063344 26063365 -227193218 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 551 196 0 10 chr2 26063366 26063463 -227193120 - FLAM_A SINE Alu -46 96 1 2385 85 3 0 chr2 26063726 26064020 -227192563 - AluY SINE Alu -16 295 1 207 100 0 0 chr2 26064097 26064127 -227192456 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 293 0 113 chr2 26064219 26064321 -227192262 + MER5A DNA MER1_type 36 121 -68 1901 158 14 3 chr2 26064321 26064612 -227191971 - AluJb SINE Alu -18 294 1 180 293 0 113 chr2 26064612 26064642 -227191941 + MER5A DNA MER1_type 121 153 -36 2336 94 3 3 chr2 26064657 26064954 -227191629 - AluSx SINE Alu -15 297 1 4066 106 9 0 chr2 26065653 26066202 -227190381 + MER41A LTR ERV1 1 554 0 1918 147 10 19 chr2 26066374 26066686 -227189897 + AluSx SINE Alu 1 309 -3 1826 137 88 0 chr2 26067001 26067285 -227189298 + AluSx SINE Alu 1 309 -3 1745 159 24 14 chr2 26067352 26067641 -227188942 - AluJb SINE Alu -20 292 1 2694 133 22 48 chr2 26067906 26068094 -227188489 + MER4B LTR ERV1 1 192 -587 2356 93 13 0 chr2 26068094 26068394 -227188189 + AluSx SINE Alu 1 304 -8 2694 133 22 48 chr2 26068394 26068816 -227187767 + MER4B LTR ERV1 192 779 0 288 273 168 54 chr2 26068914 26069494 -227187089 + L1M4 LINE L1 2214 2727 -3419 852 111 0 0 chr2 26069494 26069611 -227186972 + FLAM_C SINE Alu 2 118 -15 288 273 168 54 chr2 26069611 26069973 -227186610 + L1M4 LINE L1 2727 3263 -2883 340 25 0 0 chr2 26070384 26070424 -227186159 + L1PA16 LINE L1 6106 6145 -21 664 153 24 40 chr2 26070506 26070630 -227185953 + MER58B DNA MER1_type 218 339 -2 352 256 72 117 chr2 26070632 26070894 -227185689 + L1M4 LINE L1 3859 4131 -2015 2581 68 0 3 chr2 26070894 26071205 -227185378 - AluY SINE Alu -1 310 1 352 256 72 117 chr2 26071205 26071333 -227185250 + L1M4 LINE L1 4131 4225 -1921 1912 152 0 13 chr2 26071333 26071636 -227184947 + AluJb SINE Alu 1 299 -13 352 256 72 117 chr2 26071636 26071732 -227184851 + L1M4 LINE L1 4225 4324 -1822 433 210 43 72 chr2 26072126 26072264 -227184319 + L2 LINE L2 3161 3294 -19 222 292 75 89 chr2 26072337 26072579 -227184004 - L2 LINE L2 -354 2960 2723 2256 105 0 0 chr2 26072579 26072875 -227183708 + AluSx SINE Alu 1 296 -16 222 292 75 89 chr2 26072875 26072981 -227183602 - L2 LINE L2 -591 2723 2617 848 263 38 5 chr2 26073078 26073291 -227183292 - MIR SINE MIR -33 229 10 359 333 0 0 chr2 26073415 26073526 -227183057 - L3 LINE CR1 -11 1566 1456 2194 88 37 0 chr2 26075038 26075333 -227181250 + THE1A LTR MaLR 1 306 -49 183 156 0 0 chr2 26075333 26075365 -227181218 + A-rich Low_complexity Low_complexity 1 32 0 2328 110 13 0 chr2 26075375 26075712 -227180871 - AluSx SINE Alu 0 341 1 365 277 158 23 chr2 26075907 26076084 -227180499 - MIR SINE MIR -59 203 3 1267 163 34 0 chr2 26076184 26076393 -227180190 + MER20 DNA MER1_type 4 219 0 510 263 134 6 chr2 26076665 26076844 -227179739 + MIR SINE MIR 53 254 -8 237 289 0 0 chr2 26076982 26077027 -227179556 + LTR16C LTR ERVL 67 111 -380 1024 282 29 50 chr2 26077679 26078062 -227178521 + LTR16C LTR ERVL 103 477 -14 2126 118 3 10 chr2 26078792 26079089 -227177494 + AluSx SINE Alu 1 295 -17 4319 171 41 38 chr2 26079170 26079337 -227177246 + L1MC3 LINE L1 5107 5272 -874 1646 170 3 18 chr2 26079337 26079640 -227176943 + AluJo SINE Alu 3 301 0 4319 171 41 38 chr2 26079640 26079875 -227176708 + L1MC3 LINE L1 5272 4781 -1365 2422 101 0 0 chr2 26079875 26080182 -227176401 + AluSx SINE Alu 1 307 -5 4319 171 41 38 chr2 26080182 26080808 -227175775 + L1MC3 LINE L1 4780 5403 -743 733 164 16 8 chr2 26080830 26080958 -227175625 - AluJo SINE Alu -178 134 6 723 163 95 0 chr2 26080961 26081108 -227175475 + L1MC3 LINE L1 6118 6278 -1507 * 1032 219 8 4 chr2 26081104 26081342 -227175241 + L1ME1 LINE L1 2595 2833 -3313 * 1438 229 112 35 chr2 26081317 26081897 -227174686 + L1ME1 LINE L1 3154 3778 -2368 987 180 5 38 chr2 26081893 26082104 -227174479 + L1ME1 LINE L1 4735 4938 -1208 * 2300 120 36 31 chr2 26082103 26082495 -227174088 + L1MB7 LINE L1 5771 6164 -20 774 273 187 21 chr2 26082548 26083025 -227173558 - L1ME2 LINE L1 -283 5881 5326 260 277 141 5 chr2 26083144 26083328 -227173255 + L1ME1 LINE L1 5189 5397 -749 279 268 38 89 chr2 26083411 26083568 -227173015 + L1ME3 LINE L1 5961 6109 -53 481 267 162 37 chr2 26083622 26083773 -227172810 + L1ME1 LINE L1 5443 5574 -592 2266 113 0 3 chr2 26083773 26084082 -227172501 + AluSx SINE Alu 1 308 -4 481 267 162 37 chr2 26084082 26084329 -227172254 + L1ME1 LINE L1 5574 5903 -263 536 215 174 0 chr2 26084379 26084528 -227172055 + MER96 DNA MER1_type? 1 175 0 492 93 0 0 chr2 26084534 26084609 -227171974 + (CA)n Simple_repeat Simple_repeat 2 76 0 4751 70 3 2 chr2 26084800 26085410 -227171173 - L1PA8 LINE L1 -5 6167 5557 2223 258 119 40 chr2 26085546 26086512 -227170071 - Charlie7 DNA MER1_type -1450 1162 121 193 304 14 14 chr2 26086659 26086728 -227169855 - MIR SINE MIR -132 130 62 2159 122 0 0 chr2 26087245 26087539 -227169044 + AluY SINE Alu 1 294 -17 342 232 74 0 chr2 26087825 26087920 -227168663 + MIR SINE MIR 161 262 0 598 259 114 11 chr2 26088170 26088432 -227168151 + L1MC4a LINE L1 3875 4163 -1983 25 31 0 0 chr2 26088538 26088570 -227168013 + AT_rich Low_complexity Low_complexity 1 32 0 197 116 0 23 chr2 26089028 26089071 -227167512 + (GAAAA)n Simple_repeat Simple_repeat 4 45 0 2276 97 0 20 chr2 26089107 26089405 -227167178 + AluSx SINE Alu 1 292 -20 3172 167 65 35 chr2 26089567 26089858 -227166725 + L1MC2 LINE L1 5542 5823 -521 2572 65 0 0 chr2 26089858 26090164 -227166419 + AluY SINE Alu 1 306 -5 3172 167 65 35 chr2 26090164 26090580 -227166003 + L1MC2 LINE L1 5823 6270 -74 3213 140 52 2 chr2 26090645 26091201 -227165382 + L1MB3 LINE L1 5599 6182 -1 362 319 87 36 chr2 26091207 26091542 -227165041 + L1MC4a LINE L1 4914 5265 -881 963 135 377 0 chr2 26091604 26091819 -227164764 + AluJb SINE Alu 1 296 -6 307 331 74 0 chr2 26091977 26092140 -227164443 + L1MC4a LINE L1 5766 5940 -1868 419 331 29 0 chr2 26092448 26092584 -227163999 + MER91C DNA MER1_type 1 140 0 375 160 106 43 chr2 26092617 26092711 -227163872 + L1ME2 LINE L1 5987 6086 -78 2242 199 24 26 chr2 26092723 26093186 -227163397 + MER44D DNA MER2_type 89 605 0 286 206 31 20 chr2 26093186 26093278 -227163305 + L1ME2 LINE L1 6081 6334 0 189 203 10 0 chr2 26093434 26093482 -227163101 - MIR SINE MIR -63 145 104 279 0 0 0 chr2 26094104 26094135 -227162448 + (A)n Simple_repeat Simple_repeat 1 31 0 191 265 0 0 chr2 26094242 26094291 -227162292 - L2 LINE L2 0 3272 3224 27 49 0 0 chr2 26094975 26095016 -227161567 + GC_rich Low_complexity Low_complexity 1 41 0 240 207 43 52 chr2 26095482 26095598 -227160985 + (CGGG)n Simple_repeat Simple_repeat 3 117 0 29 47 0 0 chr2 26095610 26095653 -227160930 + GC_rich Low_complexity Low_complexity 1 43 0 234 0 0 0 chr2 26096486 26096512 -227160071 + (CCTG)n Simple_repeat Simple_repeat 2 27 0 2268 97 3 3 chr2 26096635 26096933 -227159650 + AluSx SINE Alu 1 298 -14 198 294 140 79 chr2 26098017 26098193 -227158390 + L2 LINE L2 2425 2624 -690 2214 106 0 10 chr2 26098193 26098494 -227158089 - AluSx SINE Alu -14 298 1 198 294 140 79 chr2 26098494 26098582 -227158001 + L2 LINE L2 2624 2705 -609 2480 86 0 3 chr2 26099004 26099317 -227157266 + AluSq SINE Alu 1 312 -1 261 303 64 117 chr2 26099366 26099498 -227157085 + MLT1H1 LTR MaLR 68 189 -366 2357 95 7 0 chr2 26099498 26099803 -227156780 - AluSg SINE Alu -3 307 1 261 303 64 117 chr2 26099803 26099858 -227156725 + MLT1H1 LTR MaLR 189 245 -310 788 208 68 31 chr2 26099903 26100095 -227156488 + MLT1H1 LTR MaLR 339 537 -18 860 205 100 0 chr2 26100336 26100536 -227156047 - MER58A DNA MER1_type -3 221 2 767 157 8 0 chr2 26100637 26100758 -227155825 - MLT1B LTR MaLR 0 390 269 714 206 0 0 chr2 26100758 26100884 -227155699 + AluJo/FLAM SINE Alu 5 130 -172 1891 110 78 11 chr2 26100884 26101165 -227155418 - AluSx SINE Alu -12 300 1 861 67 0 5 chr2 26101186 26101381 -227155202 - AluY SINE Alu -18 293 2 980 107 7 7 chr2 26101383 26101523 -227155060 - MLT1B LTR MaLR -214 176 37 1969 173 37 25 chr2 26101523 26102072 -227154511 + L1MB8 LINE L1 5006 5547 -631 2306 97 0 10 chr2 26102072 26102380 -227154203 - AluSg SINE Alu -5 305 1 1969 173 37 25 chr2 26102380 26102640 -227153943 + L1MB8 LINE L1 5547 6169 -9 1656 179 17 20 chr2 26102641 26102963 -227153620 - AluJb SINE Alu 0 312 1 2325 57 0 7 chr2 26102966 26103288 -227153295 - AluY SINE Alu 0 320 1 531 297 70 35 chr2 26103387 26103757 -227152826 + L1MC4a LINE L1 4540 4922 -1224 2226 87 10 7 chr2 26103765 26104054 -227152529 + AluSx SINE Alu 9 298 -14 1155 259 59 43 chr2 26104081 26104456 -227152127 + L1MC4a LINE L1 5491 5871 -1937 1332 168 0 9 chr2 26104459 26104679 -227151904 - AluJb SINE Alu -8 304 87 2115 114 3 29 chr2 26104927 26105233 -227151350 + AluSx SINE Alu 1 298 -14 936 288 102 25 chr2 26105238 26105610 -227150973 + L1ME4a LINE L1 5304 5741 -429 2093 138 7 0 chr2 26105610 26105915 -227150668 - AluSx SINE Alu -5 307 1 936 288 102 25 chr2 26105915 26106139 -227150444 + L1ME4a LINE L1 5741 5946 -224 479 230 54 7 chr2 26106370 26106518 -227150065 + L1ME4a LINE L1 5967 6121 0 180 0 0 0 chr2 26106852 26106872 -227149711 + (CCCCCA)n Simple_repeat Simple_repeat 3 22 0 889 187 0 35 chr2 26107952 26108123 -227148460 - FRAM SINE Alu -19 157 1 2154 118 20 0 chr2 26108354 26108650 -227147933 - AluSx SINE Alu -6 306 5 1920 151 6 19 chr2 26109080 26109392 -227147191 + AluJo SINE Alu 1 308 -4 2175 104 7 3 chr2 26109893 26110190 -227146393 - AluSq SINE Alu -13 300 3 2388 64 7 3 chr2 26110422 26110719 -227145864 - AluY SINE Alu -13 298 1 2157 83 3 64 chr2 26110906 26111219 -227145364 + AluSg SINE Alu 2 295 -15 2045 132 3 20 chr2 26111307 26111610 -227144973 + AluJo SINE Alu 1 298 -14 1816 159 23 7 chr2 26111669 26111970 -227144613 - AluJo SINE Alu -6 306 1 691 265 158 32 chr2 26112049 26112524 -227144059 + MLT1F LTR MaLR 1 535 -7 1899 130 58 0 chr2 26112813 26113105 -227143478 + AluSx SINE Alu 1 309 -3 1907 132 7 13 chr2 26113543 26113894 -227142689 - AluSx SINE Alu 0 312 1 1946 137 0 3 chr2 26114348 26114648 -227141935 - AluSc SINE Alu -10 299 1 251 171 0 0 chr2 26114653 26114694 -227141889 - Alu SINE Alu -9 293 253 333 282 96 53 chr2 26114938 26115126 -227141457 + MLT1H LTR MaLR 115 310 -239 231 207 11 69 chr2 26115223 26115328 -227141255 + MLT1F1 LTR MaLR 454 567 0 1763 168 27 0 chr2 26115354 26115652 -227140931 + AluJb SINE Alu 3 308 -4 2616 36 0 0 chr2 26115768 26116075 -227140508 + AluY SINE Alu 1 307 -4 2084 121 0 0 chr2 26116189 26116486 -227140097 - AluSq SINE Alu -16 297 1 2233 89 0 0 chr2 26116547 26116838 -227139745 + AluSx SINE Alu 1 291 -21 221 238 309 0 chr2 26117057 26117141 -227139442 + MIR3 SINE MIR 93 202 -6 2160 116 3 0 chr2 26117141 26117444 -227139139 - AluSq SINE Alu -9 304 1 1808 152 14 7 chr2 26117454 26117751 -227138832 - AluJb SINE Alu -13 299 1 323 275 243 0 chr2 26117885 26118165 -227138418 + L1ME4a LINE L1 5545 5892 -229 2047 116 3 16 chr2 26118268 26118571 -227138012 + AluSx SINE Alu 1 299 -13 1389 189 17 36 chr2 26118660 26118961 -227137622 - AluJo SINE Alu -17 295 1 722 146 0 0 chr2 26118979 26119089 -227137494 - HY1 scRNA scRNA -2 110 1 2464 48 0 0 chr2 26121647 26121940 -227134643 + AluY SINE Alu 1 293 -18 1009 151 11 16 chr2 26121940 26122125 -227134458 - L1MB3 LINE L1 -9 6174 5991 997 152 29 82 chr2 26122608 26122666 -227133917 + AluJo SINE Alu 72 132 -180 1971 135 0 7 chr2 26122666 26122962 -227133621 - AluSx SINE Alu -18 294 1 997 152 29 82 chr2 26122962 26123147 -227133436 + AluJo SINE Alu 132 302 -10 1665 155 14 7 chr2 26123156 26123452 -227133131 + AluJb SINE Alu 5 302 -10 29 0 0 0 chr2 26124883 26124912 -227131671 + AT_rich Low_complexity Low_complexity 1 29 0 2166 121 0 13 chr2 26125057 26125372 -227131211 + AluSq SINE Alu 1 311 -2 7541 112 21 28 chr2 26125481 26126057 -227130526 + Tigger1 DNA MER2_type 6 585 -1833 2219 114 0 0 chr2 26126057 26126365 -227130218 - AluSc SINE Alu -1 308 1 2145 93 14 0 chr2 26126365 26126656 -227129927 - AluSg SINE Alu -15 295 1 7541 112 21 28 chr2 26126656 26126954 -227129629 + Tigger1 DNA MER2_type 584 872 -1546 10586 45 9 33 chr2 26126954 26128363 -227128220 + SVA Other Other 7 1381 -5 7541 112 21 28 chr2 26128363 26128650 -227127933 + Tigger1 DNA MER2_type 872 1160 -1258 2360 79 0 0 chr2 26128650 26128953 -227127630 - AluY SINE Alu -8 303 1 1043 165 18 6 chr2 26128962 26129126 -227127457 - FAM SINE Alu -9 166 1 2180 94 7 3 chr2 26129152 26129450 -227127133 - AluSx SINE Alu -13 299 1 2345 75 0 0 chr2 26129456 26129751 -227126832 - AluSg SINE Alu -15 295 1 853 114 0 0 chr2 26129752 26129866 -227126717 + Tigger1 DNA MER2_type 2304 2417 -1 1934 122 30 7 chr2 26130781 26131084 -227125499 + AluSx SINE Alu 3 312 0 1620 229 125 77 chr2 26131507 26131722 -227124861 + L1M4 LINE L1 2953 3156 -2990 2229 72 0 13 chr2 26131722 26132029 -227124554 + AluY SINE Alu 1 303 -8 1620 161 0 75 chr2 26132039 26132185 -227124398 + AluJo SINE Alu 1 111 -201 1926 122 25 4 chr2 26132185 26132486 -227124097 + AluSx SINE Alu 1 307 0 1620 161 0 75 chr2 26132486 26132673 -227123910 + AluJo SINE Alu 111 310 -2 1620 229 125 77 chr2 26132673 26133000 -227123583 + L1M4 LINE L1 3164 3474 -2672 1649 158 11 11 chr2 26133000 26133284 -227123299 - AluJo SINE Alu -28 284 1 1620 229 125 77 chr2 26133284 26133327 -227123256 + L1M4 LINE L1 3474 3514 -2632 2107 81 0 0 chr2 26133327 26133600 -227122983 + AluSx SINE Alu 34 306 -6 1620 229 125 77 chr2 26133600 26133802 -227122781 + L1M4 LINE L1 3514 3791 -2355 980 185 0 36 chr2 26133871 26134066 -227122517 - LTR2B LTR ERV1 0 490 303 354 259 24 82 chr2 26134056 26134226 -227122357 - LTR2 LTR ERV1 -289 160 1 * 2161 185 25 0 chr2 26134228 26134634 -227121949 + L1M4 LINE L1 3781 4196 -1950 1903 185 42 45 chr2 26134670 26134861 -227121722 + MLT1C LTR MaLR 1 191 -276 2148 125 0 0 chr2 26134861 26135172 -227121411 + AluSx SINE Alu 1 311 -1 1903 185 42 45 chr2 26135172 26135263 -227121320 + MLT1C LTR MaLR 191 281 -186 2341 94 0 0 chr2 26135263 26135572 -227121011 + AluSq SINE Alu 1 309 -4 1903 185 42 45 chr2 26135572 26135737 -227120846 + MLT1C LTR MaLR 281 448 -19 532 101 0 38 chr2 26135739 26135818 -227120765 - AluSq/x SINE Alu -182 130 55 444 300 181 13 chr2 26135828 26136065 -227120518 + MLT1L LTR MaLR 1 277 -338 1114 190 70 162 chr2 26136193 26136410 -227120173 - L2 LINE L2 -664 2650 2415 1757 153 30 3 chr2 26136410 26136710 -227119873 + AluJb SINE Alu 5 312 0 1114 190 70 162 chr2 26136710 26137061 -227119522 - L2 LINE L2 -899 2415 2134 192 200 250 0 chr2 26137177 26137257 -227119326 - MIR SINE MIR 0 262 163 2108 120 0 0 chr2 26137521 26137821 -227118762 + AluSq SINE Alu 9 308 -5 341 82 2 0 chr2 26137834 26137881 -227118702 + Alu SINE Alu 2 43 -258 189 0 0 0 chr2 26138134 26138155 -227118428 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 2027 118 0 0 chr2 26138157 26138436 -227118147 - AluSg SINE Alu -31 279 1 323 340 115 64 chr2 26138542 26138854 -227117729 + L2 LINE L2 2945 3272 0 2046 116 0 26 chr2 26139275 26139577 -227117006 + AluSx SINE Alu 1 294 -18 366 278 94 52 chr2 26139756 26139947 -227116636 + L2 LINE L2 3111 3309 -4 1699 112 51 40 chr2 26139959 26140258 -227116325 - AluSc SINE Alu 0 302 1 1614 126 9 86 chr2 26140263 26140588 -227115995 - AluJb SINE Alu -12 300 1 402 21 0 0 chr2 26141454 26141501 -227115082 + (TG)n Simple_repeat Simple_repeat 2 48 0 385 282 23 38 chr2 26141964 26142095 -227114488 + MIR SINE MIR 29 157 -105 281 273 81 10 chr2 26142582 26142681 -227113902 + MIR SINE MIR 153 258 -4 250 397 9 9 chr2 26142684 26142800 -227113783 - L2 LINE L2 -13 3300 3185 1044 161 13 61 chr2 26142949 26143179 -227113404 + MER20 DNA MER1_type 1 219 0 195 42 0 0 chr2 26143794 26143818 -227112765 + (GA)n Simple_repeat Simple_repeat 2 25 0 570 65 39 0 chr2 26144105 26144182 -227112401 - MADE1 DNA Mariner 0 80 1 6752 50 20 32 chr2 26144539 26146050 -227110533 - SVA Other Other -799 1382 47 181 214 95 0 chr2 26146434 26146476 -227110107 + L2 LINE L2 3218 3263 -9 409 322 60 6 chr2 26147054 26147226 -227109357 + MIR SINE MIR 33 212 -50 216 0 0 0 chr2 26147436 26147460 -227109123 + (A)n Simple_repeat Simple_repeat 1 24 0 1349 229 93 14 chr2 26147530 26147743 -227108840 - MSTD LTR MaLR 0 396 201 1553 161 0 51 chr2 26147743 26148054 -227108529 - AluJo SINE Alu -17 295 1 1349 229 93 14 chr2 26148054 26148207 -227108376 - MSTD LTR MaLR -195 201 1 3910 51 4 0 chr2 26148858 26149331 -227107252 - L1PA6 LINE L1 0 6154 5680 1357 194 127 53 chr2 26149921 26149942 -227106641 - Charlie1 DNA MER1_type -696 2065 2047 351 0 0 0 chr2 26149942 26149981 -227106602 + (TG)n Simple_repeat Simple_repeat 2 40 0 1357 194 127 53 chr2 26149981 26150128 -227106455 - Charlie1 DNA MER1_type -714 2047 1912 2308 84 0 10 chr2 26150128 26150436 -227106147 - AluSx SINE Alu -5 307 3 1357 194 127 53 chr2 26150436 26150683 -227105900 - Charlie1 DNA MER1_type -849 1912 1618 2214 87 0 0 chr2 26150692 26151003 -227105580 + AluY SINE Alu 1 311 0 797 273 18 7 chr2 26151052 26151330 -227105253 + L1ME1 LINE L1 2910 3190 -2956 2928 218 107 44 chr2 26151342 26152254 -227104329 + L1ME1 LINE L1 3815 4810 -1336 1948 107 10 21 chr2 26152254 26152545 -227104038 + AluSg SINE Alu 6 293 -17 2928 218 107 44 chr2 26152545 26152734 -227103849 + L1ME1 LINE L1 4810 4986 -1160 2659 201 154 14 chr2 26152739 26153454 -227103129 + L1ME1 LINE L1 5340 6311 -23 1954 117 7 10 chr2 26153454 26153744 -227102839 - AluSq SINE Alu -24 289 1 1130 196 26 0 chr2 26153845 26154074 -227102509 - AluJo SINE Alu -20 292 58 2731 140 137 17 chr2 26154376 26154954 -227101629 - L1MB3 LINE L1 -11 6172 5526 1290 211 261 8 chr2 26154966 26155444 -227101139 - L1MB3 LINE L1 -807 5339 4741 22 0 0 0 chr2 26155956 26155978 -227100605 + AT_rich Low_complexity Low_complexity 1 22 0 187 292 83 10 chr2 26157755 26157851 -227098732 - MIR SINE MIR -12 250 148 278 282 90 0 chr2 26157925 26158003 -227098580 + L2 LINE L2 3229 3313 0 25 31 0 0 chr2 26160073 26160105 -227096478 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr2 26161270 26161291 -227095292 + AT_rich Low_complexity Low_complexity 1 21 0 233 148 19 37 chr2 26162523 26162577 -227094006 + A-rich Low_complexity Low_complexity 2 54 0 405 0 0 0 chr2 26166836 26166881 -227089702 + (CA)n Simple_repeat Simple_repeat 1 45 0 220 306 41 31 chr2 26167002 26167100 -227089483 + MER5B DNA MER1_type 1 99 -79 2095 132 0 0 chr2 26167117 26167413 -227089170 - AluSx SINE Alu -16 296 1 2369 96 6 6 chr2 26167534 26167846 -227088737 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 26168017 26168038 -227088545 + AT_rich Low_complexity Low_complexity 1 21 0 221 290 0 0 chr2 26168383 26168452 -227088131 + A-rich Low_complexity Low_complexity 3 71 0 1298 127 19 0 chr2 26168801 26169006 -227087577 + MER2 DNA MER2_type 1 209 -136 1808 140 9 65 chr2 26169787 26170109 -227086474 + AluSg SINE Alu 1 304 -6 2171 92 7 24 chr2 26170126 26170418 -227086165 + AluSx SINE Alu 10 296 -16 762 256 116 0 chr2 26172468 26172675 -227083908 + MIR SINE MIR 32 262 0 1911 170 20 0 chr2 26173258 26173564 -227083019 + AluJb SINE Alu 1 312 0 1740 163 42 7 chr2 26173689 26173972 -227082611 - AluJb SINE Alu -19 293 1 2173 112 13 3 chr2 26174466 26174771 -227081812 + AluSq SINE Alu 1 308 -5 2120 96 24 10 chr2 26174872 26175164 -227081419 - AluSp SINE Alu -17 296 1 186 103 0 0 chr2 26175302 26175331 -227081252 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 309 280 27 75 chr2 26177076 26177262 -227079321 + MER5B DNA MER1_type 1 177 -1 248 224 13 0 chr2 26177391 26177467 -227079116 + L1MB7 LINE L1 6108 6184 0 317 326 11 0 chr2 26177590 26177679 -227078904 + MER5A DNA MER1_type 50 139 -50 24 67 0 0 chr2 26178089 26178134 -227078449 + AT_rich Low_complexity Low_complexity 1 45 0 279 79 0 0 chr2 26178354 26178392 -227078191 + (A)n Simple_repeat Simple_repeat 1 38 0 814 264 42 5 chr2 26178552 26178768 -227077815 - MER58A DNA MER1_type 0 224 1 255 323 87 24 chr2 26178822 26178949 -227077634 - L3 LINE CR1 -103 1474 1340 1991 80 0 112 chr2 26179257 26179595 -227076988 + AluSg SINE Alu 1 300 0 326 254 0 0 chr2 26179618 26179681 -227076902 + L3 LINE CR1 1507 1569 -8 180 0 0 0 chr2 26179822 26179842 -227076741 + (A)n Simple_repeat Simple_repeat 1 20 0 208 266 53 43 chr2 26180352 26180446 -227076137 - MIR3 SINE MIR -15 193 99 2244 108 0 0 chr2 26180859 26181155 -227075428 - AluSx SINE Alu -16 296 1 29 28 0 0 chr2 26182075 26182111 -227074472 + AT_rich Low_complexity Low_complexity 1 36 0 226 250 54 9 chr2 26182120 26182232 -227074351 + L1MC/D LINE L1 5217 5333 -813 357 255 156 82 chr2 26182290 26182521 -227074062 + L1MC/D LINE L1 5412 5659 -2149 560 309 100 31 chr2 26182540 26182890 -227073693 + L1MEd LINE L1 586 959 -5160 386 315 67 30 chr2 26183047 26183293 -227073290 + L1MEd LINE L1 1012 1282 -4849 2410 67 3 0 chr2 26183293 26183593 -227072990 + AluY SINE Alu 1 301 -10 386 315 67 30 chr2 26183593 26183778 -227072805 + L1MEd LINE L1 1282 1459 -4672 2226 120 3 0 chr2 26184284 26184593 -227071990 + AluSx SINE Alu 1 310 -2 328 276 126 36 chr2 26184652 26185072 -227071511 + L1MEd LINE L1 2114 2571 -3558 2302 84 0 20 chr2 26185104 26185403 -227071180 + AluSg SINE Alu 1 293 -17 970 195 81 5 chr2 26185568 26185789 -227070794 - MIR SINE MIR -21 241 4 390 181 23 90 chr2 26185833 26185966 -227070617 + L1MEd LINE L1 2805 2928 -3201 341 298 5 58 chr2 26186127 26186229 -227070354 - L1MC4a LINE L1 -1927 5881 5792 1378 99 43 52 chr2 26186229 26186461 -227070122 + MER30 DNA MER1_type 1 230 0 341 298 5 58 chr2 26186461 26186546 -227070037 - L1MC4a LINE L1 -2016 5792 5704 2328 73 10 3 chr2 26187104 26187407 -227069176 + AluY SINE Alu 1 305 -6 242 342 45 18 chr2 26187665 26187776 -227068807 + L2 LINE L2 3192 3305 -8 22 0 0 0 chr2 26187884 26187906 -227068677 + AT_rich Low_complexity Low_complexity 1 22 0 620 299 76 23 chr2 26187976 26188408 -227068175 - HAL1 LINE L1 -933 1574 1120 445 279 73 59 chr2 26188560 26188764 -227067819 - HAL1 LINE L1 -1877 630 424 1388 155 4 4 chr2 26190212 26190438 -227066145 - AluJb SINE Alu -20 292 67 22 0 0 0 chr2 26190537 26190559 -227066024 + AT_rich Low_complexity Low_complexity 1 22 0 192 97 0 0 chr2 26190731 26190762 -227065821 + (CTG)n Simple_repeat Simple_repeat 2 32 0 448 36 0 0 chr2 26190921 26190977 -227065606 + U2 snRNA snRNA 2 57 -131 983 142 0 13 chr2 26192098 26192253 -227064330 - AluSx SINE Alu -3 309 157 613 103 0 11 chr2 26192254 26192341 -227064242 - AluSx SINE Alu -226 86 1 1922 114 111 0 chr2 26192373 26192653 -227063930 + AluSp SINE Alu 1 311 -2 335 206 10 39 chr2 26192663 26192765 -227063818 + L1MEd LINE L1 3835 3933 -2196 2172 101 14 3 chr2 26192856 26193143 -227063440 + AluSc SINE Alu 1 290 -19 21 0 0 0 chr2 26194183 26194204 -227062379 + AT_rich Low_complexity Low_complexity 1 21 0 2256 105 13 0 chr2 26194351 26194657 -227061926 + AluSp SINE Alu 1 310 -3 2289 92 3 0 chr2 26194827 26195121 -227061462 + AluSx SINE Alu 1 295 -17 2511 63 0 3 chr2 26195284 26195585 -227060998 + AluY SINE Alu 1 300 -11 1946 136 25 0 chr2 26195655 26195941 -227060642 + AluSx SINE Alu 1 293 -19 1200 113 11 0 chr2 26195996 26196173 -227060410 + L1PA15 LINE L1 5981 6159 -6 26 0 0 0 chr2 26196226 26196252 -227060331 + AT_rich Low_complexity Low_complexity 1 26 0 550 276 121 22 chr2 26196285 26196966 -227059617 - L1ME3 LINE L1 -154 6008 5258 1633 107 71 119 chr2 26196990 26197029 -227059554 + THE1C LTR MaLR 1 40 -335 2406 97 0 0 chr2 26197029 26197328 -227059255 - AluSq SINE Alu -14 299 1 1633 107 71 119 chr2 26197328 26197682 -227058901 + THE1C LTR MaLR 40 375 0 322 278 8 8 chr2 26197777 26197903 -227058680 - L1ME3 LINE L1 -1043 5103 4978 2303 194 92 19 chr2 26197971 26198588 -227057995 - L1MB7 LINE L1 -58 6126 5465 1176 178 9 14 chr2 26199002 26199215 -227057368 - AluJo SINE Alu -25 287 76 234 145 17 48 chr2 26199259 26199500 -227057083 + AluJb SINE Alu 1 296 -6 21 0 0 0 chr2 26199586 26199607 -227056976 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr2 26199822 26199851 -227056732 + AT_rich Low_complexity Low_complexity 1 29 0 273 271 176 0 chr2 26199884 26199969 -227056614 - MIR SINE MIR -111 151 52 859 237 173 39 chr2 26200005 26200444 -227056139 + MLT1D LTR MaLR 8 505 0 474 262 40 25 chr2 26200570 26200772 -227055811 - L1MC4 LINE L1 -1048 6994 6790 251 280 10 50 chr2 26200786 26200898 -227055685 - L1MC5 LINE L1 -1225 6770 6637 2212 109 3 31 chr2 26200976 26201298 -227055285 - AluSq SINE Alu 0 313 1 1945 121 68 0 chr2 26201771 26202051 -227054532 - AluSq SINE Alu -14 299 1 285 163 0 0 chr2 26202118 26202167 -227054416 - Alu SINE Alu -4 304 256 540 296 43 27 chr2 26202193 26202366 -227054217 - L1MC5 LINE L1 -1939 5869 5689 705 260 44 0 chr2 26202366 26202547 -227054036 + MER5A DNA MER1_type 1 189 0 540 296 43 27 chr2 26202547 26202630 -227053953 - L1MC5 LINE L1 -2119 5689 5609 2009 72 12 0 chr2 26202706 26202955 -227053628 + AluY SINE Alu 1 252 -59 192 77 0 0 chr2 26202960 26202986 -227053597 + (A)n Simple_repeat Simple_repeat 1 26 0 858 174 13 0 chr2 26203150 26203322 -227053261 + AluSq SINE Alu 134 307 0 235 89 0 44 chr2 26203454 26203499 -227053084 - AluJo SINE Alu -1 301 259 1012 160 68 48 chr2 26203499 26203571 -227053012 - AluJo SINE Alu -90 222 153 2046 100 24 3 chr2 26203571 26203861 -227052722 - AluSg SINE Alu -14 296 1 1012 160 68 48 chr2 26203861 26203994 -227052589 - AluJo SINE Alu -159 153 13 256 287 6 96 chr2 26204026 26204163 -227052420 - L1 LINE L1 -1896 4250 4139 2141 115 0 3 chr2 26204163 26204471 -227052112 + AluSx SINE Alu 1 307 0 256 287 6 96 chr2 26204471 26204561 -227052022 - L1 LINE L1 -2007 4139 4042 2286 105 0 10 chr2 26204746 26205059 -227051524 + AluSx SINE Alu 1 310 -2 312 266 83 41 chr2 26205376 26205545 -227051038 - L1 LINE L1 -2975 3171 2996 1605 155 40 34 chr2 26205547 26205674 -227050909 + AluJb SINE Alu 1 126 -186 2149 104 0 0 chr2 26205674 26206000 -227050583 + AluSg SINE Alu 1 326 0 1605 155 40 34 chr2 26206000 26206168 -227050415 + AluJb SINE Alu 126 299 -13 1613 245 44 13 chr2 26206368 26206821 -227049762 - MLT1C LTR MaLR 0 467 1 1837 146 4 0 chr2 26207111 26207421 -227049162 - AluSx SINE Alu 0 315 5 2041 136 3 3 chr2 26207454 26207748 -227048835 - AluSx SINE Alu -18 294 1 446 270 132 65 chr2 26207876 26208141 -227048442 + L1M4 LINE L1 3740 3986 -2160 2324 101 0 0 chr2 26208141 26208439 -227048144 - AluSc SINE Alu -11 298 1 446 270 132 65 chr2 26208439 26208471 -227048112 + L1M4 LINE L1 3986 4014 -2132 2105 132 0 7 chr2 26208471 26208774 -227047809 + AluSx SINE Alu 1 301 -11 446 270 132 65 chr2 26208774 26209019 -227047564 + L1M4 LINE L1 4014 4316 -1830 1121 265 56 36 chr2 26209019 26209465 -227047118 + LTR40c LTR ERVL 5 459 -6 918 247 114 42 chr2 26209474 26210158 -227046425 + L1M4 LINE L1 4301 5033 -1113 959 256 118 4 chr2 26210261 26210810 -227045773 - L1M1 LINE L1 -495 5667 5155 376 253 50 68 chr2 26210838 26211059 -227045524 - L1M4 LINE L1 -1386 4760 4544 423 260 95 18 chr2 26211317 26211486 -227045097 + L1ME3A LINE L1 5952 6133 -37 1061 165 55 5 chr2 26211494 26211712 -227044871 + MER46A DNA MER2_type 1 229 -7 238 273 50 40 chr2 26211726 26211825 -227044758 + L1ME3A LINE L1 5910 6009 -161 257 188 109 31 chr2 26212038 26212102 -227044481 + MER5C DNA MER1_type 56 124 -200 212 266 38 0 chr2 26212276 26212355 -227044228 + A-rich Low_complexity Low_complexity 1 82 0 1831 180 23 0 chr2 26212692 26212997 -227043586 - AluJo SINE Alu 0 312 1 2230 98 0 3 chr2 26213107 26213403 -227043180 + AluSg SINE Alu 1 295 -15 2019 130 0 17 chr2 26213909 26214202 -227042381 - AluJo SINE Alu -24 288 1 2281 102 0 10 chr2 26214501 26214806 -227041777 - AluSx SINE Alu -10 302 1 1879 128 72 0 chr2 26214871 26215161 -227041422 + AluSx SINE Alu 1 311 -1 28 0 0 0 chr2 26217677 26217705 -227038878 + AT_rich Low_complexity Low_complexity 1 28 0 315 164 0 30 chr2 26218700 26218767 -227037816 - MER3 DNA MER1_type -4 205 141 3182 159 35 26 chr2 26218771 26219069 -227037514 + L1MC1 LINE L1 4924 5218 -1115 2293 102 0 0 chr2 26219069 26219373 -227037210 + AluSg SINE Alu 5 308 -2 3182 159 35 26 chr2 26219373 26219941 -227036642 + L1MC1 LINE L1 5218 5799 -534 1883 99 21 0 chr2 26219955 26220237 -227036346 + L1PA13 LINE L1 5876 6163 0 2687 135 50 28 chr2 26220238 26220382 -227036201 + L1MC1 LINE L1 5816 5955 -378 2249 110 0 0 chr2 26220382 26220673 -227035910 + AluSq SINE Alu 1 291 -22 2687 135 50 28 chr2 26220673 26221023 -227035560 + L1MC1 LINE L1 5955 6321 -12 553 218 8 38 chr2 26221035 26221168 -227035415 - MER3 DNA MER1_type -80 129 1 834 159 7 21 chr2 26221763 26221908 -227034675 + FLAM_C SINE Alu 1 143 0 1723 162 13 26 chr2 26221912 26222214 -227034369 + AluJb SINE Alu 1 298 -14 613 269 122 46 chr2 26222530 26222768 -227033815 + MIR SINE MIR 6 261 -1 1892 150 3 29 chr2 26222829 26223135 -227033448 - AluJb SINE Alu -14 298 1 255 292 0 34 chr2 26224278 26224367 -227032216 + MER21B LTR ERV1 1 86 -777 329 293 0 0 chr2 26224392 26224467 -227032116 + MER21B LTR ERV1 20 94 -769 2975 176 64 41 chr2 26224468 26224749 -227031834 + MER21B LTR ERV1 48 321 -542 2159 105 0 3 chr2 26224749 26225034 -227031549 + AluSx SINE Alu 1 284 -28 333 0 0 0 chr2 26225034 26225071 -227031512 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 2975 176 64 41 chr2 26225071 26225448 -227031135 + MER21B LTR ERV1 320 722 -141 1741 156 13 13 chr2 26225448 26225756 -227030827 - MER1B DNA MER1_type 0 339 32 536 204 117 0 chr2 26225759 26225896 -227030687 + MER21B LTR ERV1 710 862 -1 434 335 56 14 chr2 26226937 26227152 -227029431 + ERVL LTR ERVL 4851 5074 -690 1854 183 3 0 chr2 26227152 26227463 -227029120 + AluSx SINE Alu 1 312 0 2008 112 36 0 chr2 26227621 26227899 -227028684 + AluSx SINE Alu 1 288 -24 1454 197 3 43 chr2 26228545 26228690 -227027893 + AluJo SINE Alu 1 129 -183 1726 177 3 0 chr2 26228690 26228984 -227027599 + AluJb SINE Alu 1 295 -17 1454 197 3 43 chr2 26228984 26229142 -227027441 + AluJo SINE Alu 129 292 -20 381 269 219 0 chr2 26229618 26229778 -227026805 + MLT1K LTR MaLR 359 553 -35 2194 94 0 0 chr2 26229853 26230128 -227026455 + AluSx SINE Alu 1 275 -37 203 0 0 36 chr2 26230132 26230160 -227026423 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 350 321 70 27 chr2 26230182 26230369 -227026214 + MIR SINE MIR 20 214 -48 1956 130 3 7 chr2 26230736 26231062 -227025521 - AluSx SINE Alu 0 325 1 32 43 0 0 chr2 26231991 26232037 -227024546 + AT_rich Low_complexity Low_complexity 1 46 0 347 267 61 8 chr2 26232909 26233040 -227023543 + MLT1K LTR MaLR 10 147 -441 324 0 0 0 chr2 26233072 26233108 -227023475 + (CA)n Simple_repeat Simple_repeat 2 37 0 2092 128 3 0 chr2 26233421 26233717 -227022866 - AluSx SINE Alu -15 297 1 453 278 108 45 chr2 26235949 26236032 -227020551 + L1MB7 LINE L1 4968 5044 -1120 1595 145 83 25 chr2 26236032 26236141 -227020442 + AluJb SINE Alu 3 104 -208 405 0 0 0 chr2 26236141 26236186 -227020397 + (CA)n Simple_repeat Simple_repeat 2 46 0 1595 145 83 25 chr2 26236186 26236377 -227020206 + AluJb SINE Alu 104 312 0 453 278 108 45 chr2 26236377 26236735 -227019848 + L1MB7 LINE L1 5044 5449 -715 230 119 24 0 chr2 26236769 26236811 -227019772 + L1MC4a LINE L1 7649 7691 -117 23 33 0 0 chr2 26236818 26236848 -227019735 + AT_rich Low_complexity Low_complexity 1 30 0 2132 114 7 10 chr2 26236848 26237138 -227019445 - AluSx SINE Alu -23 289 1 532 207 16 0 chr2 26237138 26237259 -227019324 + L1MD2 LINE L1 6221 6343 -16 2092 121 3 7 chr2 26237266 26237571 -227019012 + AluSq SINE Alu 6 309 -4 319 281 65 78 chr2 26237575 26237881 -227018702 + L1MB7 LINE L1 5480 5781 -2027 404 312 64 0 chr2 26237960 26238085 -227018498 - MIR SINE MIR -74 188 56 1071 246 74 3 chr2 26238361 26238670 -227017913 - MER46C DNA MER2_type 0 338 8 2557 58 0 0 chr2 26238853 26239161 -227017422 + AluY SINE Alu 1 308 -3 248 194 113 16 chr2 26239967 26240029 -227016554 + MIR SINE MIR 84 151 -111 196 278 129 48 chr2 26240192 26240401 -227016182 + L2 LINE L2 2648 2873 -441 304 327 159 9 chr2 26240733 26240953 -227015630 + MLT1K LTR MaLR 336 588 0 815 196 72 0 chr2 26241184 26241337 -227015246 + AluSg/x SINE Alu 134 297 -15 509 212 133 35 chr2 26241816 26241927 -227014656 + HAL1b LINE L1 429 528 -820 2039 128 14 0 chr2 26241927 26242216 -227014367 + AluSx SINE Alu 1 293 -19 509 212 133 35 chr2 26242216 26242330 -227014253 + HAL1b LINE L1 528 676 -672 2082 113 0 7 chr2 26243323 26243606 -227012977 + AluSx SINE Alu 15 295 -17 386 185 146 54 chr2 26243670 26243875 -227012708 + L1MC4 LINE L1 7001 7224 -818 1557 238 145 17 chr2 26243875 26244391 -227012192 + MLT1E LTR MaLR 1 582 -11 2087 207 124 49 chr2 26244399 26244985 -227011598 + L1MC4 LINE L1 7221 7762 -280 198 0 0 0 chr2 26244985 26245007 -227011576 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1718 154 11 28 chr2 26245009 26245295 -227011288 - AluJo SINE Alu -31 281 1 2087 207 124 49 chr2 26245295 26245455 -227011128 + L1MC4 LINE L1 7762 8026 -16 694 232 165 14 chr2 26245534 26245821 -227010762 + L1MB7 LINE L1 5810 6141 -43 1663 175 7 48 chr2 26245823 26245965 -227010618 + AluJo SINE Alu 1 147 -165 2152 88 6 41 chr2 26245965 26246284 -227010299 + AluSp SINE Alu 1 308 -5 1663 175 7 48 chr2 26246284 26246450 -227010133 + AluJo SINE Alu 147 296 -16 236 163 41 0 chr2 26246503 26246552 -227010031 + L1MB7 LINE L1 6134 6184 0 713 135 18 0 chr2 26246561 26246672 -227009911 + AluSq/x SINE Alu 1 113 -200 22 70 0 0 chr2 26249274 26249317 -227007266 + AT_rich Low_complexity Low_complexity 1 43 0 192 77 0 0 chr2 26249549 26249575 -227007008 + (CA)n Simple_repeat Simple_repeat 1 26 0 2645 137 72 14 chr2 26250380 26250897 -227005686 - L1MB2 LINE L1 -2 6169 5623 204 265 73 0 chr2 26251359 26251427 -227005156 - L3 LINE CR1 -297 1280 1208 216 0 0 0 chr2 26251838 26251862 -227004721 + (A)n Simple_repeat Simple_repeat 1 24 0 1365 172 73 40 chr2 26251904 26252206 -227004377 - AluJo SINE Alu 0 312 1 25 31 0 0 chr2 26252213 26252245 -227004338 + AT_rich Low_complexity Low_complexity 1 32 0 2219 101 3 10 chr2 26253298 26253606 -227002977 + AluSp SINE Alu 1 306 -7 2244 115 0 3 chr2 26253618 26253923 -227002660 + AluSg SINE Alu 1 304 -6 181 284 95 40 chr2 26253951 26254025 -227002558 + MIR SINE MIR 16 93 -115 675 245 7 0 chr2 26254177 26254328 -227002255 + AluJo SINE Alu 123 274 -38 282 56 0 0 chr2 26254352 26254388 -227002195 + (CA)n Simple_repeat Simple_repeat 2 37 0 2720 213 124 72 chr2 26254840 26255424 -227001159 + L1MDb LINE L1 311 863 -5543 2105 123 20 0 chr2 26255424 26255717 -227000866 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 26255717 26256112 -227000471 + L1MDb LINE L1 863 1236 -5170 1932 128 60 0 chr2 26256112 26256394 -227000189 + AluSx SINE Alu 1 299 -13 2720 213 124 72 chr2 26256394 26256453 -227000130 + L1MDb LINE L1 1236 1291 -5115 1776 167 28 3 chr2 26256453 26256741 -226999842 + AluJb SINE Alu 1 295 -17 2720 213 124 72 chr2 26256741 26257692 -226998891 + L1MDb LINE L1 1291 2508 -3898 2425 214 80 21 chr2 26257692 26258356 -226998227 + L1MD2 LINE L1 5575 6277 -82 278 163 0 0 chr2 26258420 26258469 -226998114 + MLT1K LTR MaLR 3 51 -537 2211 129 0 3 chr2 26258487 26258782 -226997801 + AluSx SINE Alu 1 294 -18 2166 131 0 0 chr2 26259145 26259457 -226997126 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 26259506 26259533 -226997050 + AT_rich Low_complexity Low_complexity 1 27 0 2181 112 0 7 chr2 26259903 26260199 -226996384 - AluSx SINE Alu -18 294 1 530 146 37 0 chr2 26261214 26261296 -226995287 + FLAM SINE Alu 43 127 -16 22 0 0 0 chr2 26262613 26262635 -226993948 + AT_rich Low_complexity Low_complexity 1 22 0 1549 154 8 0 chr2 26262644 26262878 -226993705 + AluJb SINE Alu 1 236 -76 1470 136 125 52 chr2 26262909 26263196 -226993387 + AluJb SINE Alu 1 308 -4 320 196 0 56 chr2 26263409 26263516 -226993067 + LTR41 LTR ERVL 662 762 -11 997 68 0 23 chr2 26264690 26264823 -226991760 - AluJb SINE Alu -7 305 176 860 183 0 0 chr2 26264964 26265106 -226991477 - FLAM_C SINE Alu -1 142 1 22 70 0 0 chr2 26265250 26265293 -226991290 + AT_rich Low_complexity Low_complexity 1 43 0 2364 157 37 5 chr2 26265440 26265873 -226990710 - L1MB4 LINE L1 -7 6173 5727 1576 172 17 10 chr2 26266091 26266381 -226990202 + AluJb SINE Alu 1 292 -20 2211 102 0 16 chr2 26266641 26266777 -226989806 + AluSq SINE Alu 2 139 -174 2072 69 0 0 chr2 26266777 26267038 -226989545 + AluY SINE Alu 37 297 -14 2211 102 0 16 chr2 26267038 26267216 -226989367 + AluSq SINE Alu 139 311 -2 587 101 0 0 chr2 26267648 26267727 -226988856 - AluS SINE Alu -233 80 2 204 67 0 0 chr2 26267771 26267801 -226988782 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 333 118 0 0 chr2 26267802 26267818 -226988765 + (TG)n Simple_repeat Simple_repeat 1 67 0 333 118 0 0 chr2 26267818 26267869 -226988714 + (TG)n Simple_repeat Simple_repeat 2 52 0 1983 114 0 49 chr2 26267888 26268094 -226988489 - AluSx SINE Alu -3 309 123 2189 73 7 16 chr2 26268094 26268397 -226988186 + AluY SINE Alu 1 300 -11 1983 114 0 49 chr2 26268397 26268515 -226988068 - AluSx SINE Alu -189 123 1 877 187 12 0 chr2 26268751 26268917 -226987666 + FAM SINE Alu 1 49 0 374 285 21 61 chr2 26269014 26269229 -226987354 - MER20B DNA MER1_type -4 215 4 1931 137 16 0 chr2 26269375 26269681 -226986902 + AluSx SINE Alu 1 311 -1 1299 211 39 0 chr2 26269726 26270011 -226986572 - AluJo SINE Alu -16 296 1 25 31 0 0 chr2 26270518 26270550 -226986033 + AT_rich Low_complexity Low_complexity 1 32 0 29 78 0 0 chr2 26270650 26270714 -226985869 + AT_rich Low_complexity Low_complexity 1 64 0 360 310 50 72 chr2 26270950 26271269 -226985314 + L1MDa LINE L1 21 332 -6208 2173 112 0 7 chr2 26271438 26271741 -226984842 + AluSx SINE Alu 1 301 -11 866 169 39 0 chr2 26271741 26271895 -226984688 + AluSg/x SINE Alu 132 291 -19 419 273 72 24 chr2 26271896 26272105 -226984478 + L1MDa LINE L1 1070 1288 -5255 252 234 16 16 chr2 26272602 26272666 -226983917 + L2 LINE L2 2310 2373 -941 504 238 104 0 chr2 26272822 26272986 -226983597 + L1MC5 LINE L1 7720 7900 -61 2073 91 0 7 chr2 26273415 26273729 -226982854 + AluY SINE Alu 1 312 0 1994 128 3 0 chr2 26273838 26274134 -226982449 + AluSq SINE Alu 1 297 -16 1628 154 0 47 chr2 26274230 26274548 -226982035 + AluSx SINE Alu 1 303 -9 1515 141 0 4 chr2 26274549 26274783 -226981800 - AluJb SINE Alu -12 300 68 808 161 8 0 chr2 26274783 26274913 -226981670 - AluJo/FLAM SINE Alu -181 131 1 1759 179 113 136 chr2 26275035 26275939 -226980644 - L1MC5 LINE L1 -30 7931 7051 2004 113 26 22 chr2 26275939 26276250 -226980333 + AluSq SINE Alu 1 312 -1 1759 179 113 136 chr2 26276250 26276338 -226980245 - L1MC5 LINE L1 -910 7051 6962 1303 143 0 31 chr2 26276765 26276988 -226979595 + AluSg/x SINE Alu 83 298 -14 412 336 125 19 chr2 26277663 26278079 -226978504 - L2 LINE L2 -1110 2204 1745 265 281 210 27 chr2 26278424 26278648 -226977935 + L2 LINE L2 1946 2210 -1104 993 111 0 76 chr2 26278710 26278882 -226977701 - FRAM SINE Alu -17 159 1 799 235 36 25 chr2 26279349 26279545 -226977038 - MIR SINE MIR -2 260 63 291 232 63 42 chr2 26279548 26279643 -226976940 + HERVL LTR ERVL 4203 4299 -1355 331 322 101 0 chr2 26279762 26279920 -226976663 + HERVL LTR ERVL 5177 5343 -142 978 106 0 7 chr2 26280433 26280604 -226975979 - AluSg/x SINE Alu 0 308 139 2177 99 3 7 chr2 26280607 26280909 -226975674 - AluSx SINE Alu -11 301 1 189 0 0 0 chr2 26280914 26280935 -226975648 + (T)n Simple_repeat Simple_repeat 1 21 0 423 292 82 31 chr2 26281654 26281920 -226974663 - MLT1J LTR MaLR -119 331 64 856 271 43 60 chr2 26282056 26282406 -226974177 + L2 LINE L2 2876 3219 -94 644 152 0 0 chr2 26282407 26282532 -226974051 - AluSg/x SINE Alu 0 314 190 514 152 0 54 chr2 26282535 26282627 -226973956 + L2 LINE L2 3212 3298 -15 21 36 0 0 chr2 26282774 26282802 -226973781 + AT_rich Low_complexity Low_complexity 1 28 0 2058 106 7 7 chr2 26282998 26283301 -226973282 + AluSc SINE Alu 5 307 -2 189 171 0 0 chr2 26283305 26283340 -226973243 + A-rich Low_complexity Low_complexity 1 35 0 618 126 0 0 chr2 26283362 26283449 -226973134 + FRAM SINE Alu 75 161 -15 731 193 31 68 chr2 26283449 26283537 -226973046 + L2 LINE L2 3129 3219 -94 1828 139 20 14 chr2 26283537 26283832 -226972751 - AluSx SINE Alu -15 297 1 731 193 31 68 chr2 26283832 26283935 -226972648 + L2 LINE L2 3219 3313 0 443 256 74 78 chr2 26283955 26284224 -226972359 - MLT1J LTR MaLR -241 270 3 1992 101 42 3 chr2 26284269 26284557 -226972026 - AluSq SINE Alu -14 299 1 2138 114 0 9 chr2 26284619 26284934 -226971649 + AluSx SINE Alu 1 312 0 793 165 0 8 chr2 26284987 26285120 -226971463 - FLAM_A SINE Alu -1 132 1 2133 105 0 10 chr2 26285954 26286267 -226970316 - AluSx SINE Alu -2 310 1 207 326 184 31 chr2 26286429 26286625 -226969958 + MIR SINE MIR 3 228 -34 2062 112 10 0 chr2 26286939 26287233 -226969350 - AluSq SINE Alu -16 297 1 2142 113 0 0 chr2 26287590 26287890 -226968693 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 26288150 26288174 -226968409 + AT_rich Low_complexity Low_complexity 1 24 0 234 128 0 0 chr2 26288430 26288469 -226968114 + (CA)n Simple_repeat Simple_repeat 2 40 0 204 179 0 0 chr2 26290266 26290305 -226966278 + (CA)n Simple_repeat Simple_repeat 1 39 0 2192 93 3 7 chr2 26291023 26291323 -226965260 - AluSx SINE Alu -13 299 1 484 275 67 7 chr2 26291323 26291472 -226965111 + MIR SINE MIR 91 248 -14 1994 128 10 3 chr2 26291633 26291938 -226964645 - AluSx SINE Alu -3 309 3 1564 122 106 0 chr2 26292342 26292588 -226963995 + AluSx SINE Alu 1 272 -40 200 227 0 15 chr2 26292588 26292644 -226963939 + GA-rich Low_complexity Low_complexity 12 68 0 246 193 0 35 chr2 26293176 26293233 -226963350 + LTR54 LTR ERV1 402 456 -54 1807 147 17 0 chr2 26293237 26293529 -226963054 - AluSx SINE Alu -15 297 1 2024 111 7 17 chr2 26293544 26293841 -226962742 - AluSx SINE Alu -18 294 1 222 223 69 56 chr2 26293871 26293950 -226962633 + MIR SINE MIR 51 130 -78 417 248 18 9 chr2 26294594 26294707 -226961876 - MIR SINE MIR -129 133 20 498 254 176 8 chr2 26294801 26295045 -226961538 + L1ME LINE L1 5450 5734 -436 491 211 66 26 chr2 26295100 26295252 -226961331 - L1ME4a LINE L1 -17 6104 5947 850 157 0 0 chr2 26295269 26295403 -226961180 + AluJo SINE Alu 1 134 -178 1949 95 0 41 chr2 26295491 26295814 -226960769 - AluSc SINE Alu 0 311 1 454 210 76 112 chr2 26295828 26295948 -226960635 - L1ME4a LINE L1 -303 5818 5708 1659 176 17 0 chr2 26295948 26296238 -226960345 + AluJo SINE Alu 1 295 -17 454 210 76 112 chr2 26296238 26296341 -226960242 - L1ME4a LINE L1 -413 5708 5603 2161 119 0 0 chr2 26296345 26296648 -226959935 - AluSx SINE Alu -9 303 1 860 209 0 28 chr2 26296654 26296831 -226959752 - FAM SINE Alu -3 172 1 4319 136 50 79 chr2 26296842 26297007 -226959576 - L1MB7 LINE L1 0 6184 6016 2030 121 3 7 chr2 26297007 26297313 -226959270 - AluSx SINE Alu -7 305 1 4319 136 50 79 chr2 26297313 26297917 -226958666 - L1MB7 LINE L1 -168 6016 5442 1932 141 0 16 chr2 26297917 26298221 -226958362 - AluJb SINE Alu -13 299 1 4319 136 50 79 chr2 26298221 26298337 -226958246 - L1MB7 LINE L1 -742 5442 5324 1873 132 3 36 chr2 26298337 26298641 -226957942 - AluSx SINE Alu -18 294 1 327 259 12 0 chr2 26298641 26298726 -226957857 - L1MB7 LINE L1 -1321 4825 4740 2196 92 0 0 chr2 26298726 26299059 -226957524 - AluSx SINE Alu 0 333 1 394 262 59 0 chr2 26299067 26299205 -226957378 + L1MC4 LINE L1 1969 6988 -1334 697 226 0 0 chr2 26299235 26299368 -226957215 + FLAM_C SINE Alu 1 133 0 7195 102 181 86 chr2 26299388 26300937 -226955646 - pTR5 LTR ERV1 0 2438 743 782 176 23 0 chr2 26300937 26301068 -226955515 + AluJb SINE Alu 147 280 -32 189 0 0 0 chr2 26301070 26301091 -226955492 + (TAA)n Simple_repeat Simple_repeat 2 22 0 27 73 0 0 chr2 26301109 26301164 -226955419 + AT_rich Low_complexity Low_complexity 1 55 0 2051 107 14 0 chr2 26301243 26301533 -226955050 + AluSq SINE Alu 1 294 -19 1683 85 71 57 chr2 26301539 26301649 -226954934 + AluSx SINE Alu 13 120 -192 2139 88 0 3 chr2 26301649 26301956 -226954627 + AluSx SINE Alu 1 306 0 1683 85 71 57 chr2 26301956 26302125 -226954458 + AluSx SINE Alu 120 297 -15 277 99 0 28 chr2 26302292 26302539 -226954044 + AluJb SINE Alu 1 303 0 216 0 0 0 chr2 26303551 26303575 -226953008 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 427 178 36 234 chr2 26303652 26303874 -226952709 + L2 LINE L2 2540 2804 -510 1911 129 10 3 chr2 26303874 26304183 -226952400 + AluSx SINE Alu 1 311 -1 1821 149 0 7 chr2 26304188 26304489 -226952094 + AluJo SINE Alu 13 311 -1 427 178 36 234 chr2 26304489 26304564 -226952019 + L2 LINE L2 2695 2783 -531 7709 21 8 291 chr2 26304669 26306531 -226950052 + SVA Other Other 62 1407 0 202 244 24 0 chr2 26306531 26306572 -226950011 + L2 LINE L2 2773 2814 -500 1147 130 5 65 chr2 26306575 26306790 -226949793 - AluJo SINE Alu -4 308 107 615 107 0 0 chr2 26306800 26306884 -226949699 + AluSp/q SINE Alu 215 298 -15 * 665 172 9 9 chr2 26306879 26306995 -226949588 - AluJo SINE Alu -195 117 2 1161 128 12 0 chr2 26307048 26307220 -226949363 + AluSx SINE Alu 1 174 -138 985 129 80 54 chr2 26307475 26307558 -226949025 - AluSx SINE Alu -82 230 151 1859 103 21 4 chr2 26307558 26307839 -226948744 - AluSx SINE Alu -22 290 5 985 129 80 54 chr2 26307839 26307979 -226948604 - AluSx SINE Alu -161 151 1 2070 108 0 0 chr2 26307999 26308276 -226948307 - AluSx SINE Alu -35 277 1 503 256 64 29 chr2 26308289 26308461 -226948122 - MLT1H LTR MaLR -249 300 123 449 299 6 92 chr2 26308642 26308693 -226947890 + LTR16C LTR ERVL 80 134 -357 1850 122 38 0 chr2 26308693 26308980 -226947603 - AluSp SINE Alu -15 298 1 449 299 6 92 chr2 26308980 26309102 -226947481 + LTR16C LTR ERVL 134 238 -253 1951 124 28 0 chr2 26309104 26309394 -226947189 - AluSg SINE Alu -12 298 1 576 154 48 2 chr2 26309397 26309726 -226946857 + L1MC2 LINE L1 6137 6449 -1309 463 90 26 0 chr2 26309726 26309804 -226946779 + (TA)n Simple_repeat Simple_repeat 1 80 0 576 154 48 2 chr2 26309804 26309818 -226946765 + L1MC2 LINE L1 6449 6461 -1297 558 217 83 0 chr2 26309818 26309938 -226946645 - FLAM_A SINE Alu -3 130 1 576 154 48 2 chr2 26309938 26309957 -226946626 + L1MC2 LINE L1 6461 7758 0 774 248 78 24 chr2 26309970 26310262 -226946321 + MLT1G LTR MaLR 40 325 -270 327 146 0 0 chr2 26310596 26310644 -226945939 + Alu SINE Alu 1 48 -254 325 115 0 82 chr2 26310641 26310686 -226945897 + MLT1A1 LTR MaLR 255 295 -70 * 2242 100 7 0 chr2 26310686 26310995 -226945588 - AluSp SINE Alu -2 311 1 325 115 0 82 chr2 26310995 26311010 -226945573 + MLT1A1 LTR MaLR 295 310 -55 252 86 0 0 chr2 26311010 26311045 -226945538 + (CAT)n Simple_repeat Simple_repeat 2 36 0 849 150 94 22 chr2 26311047 26311227 -226945356 - AluJb SINE Alu -27 285 93 451 130 0 26 chr2 26311237 26311314 -226945269 + MLT1A1 LTR MaLR 291 365 0 2127 110 3 3 chr2 26311761 26312061 -226944522 + AluSg SINE Alu 1 300 -10 2027 119 37 0 chr2 26312100 26312395 -226944188 + AluSx SINE Alu 1 306 -6 227 189 19 0 chr2 26312608 26312661 -226943922 + (TA)n Simple_repeat Simple_repeat 1 54 0 1846 117 39 0 chr2 26312661 26312942 -226943641 - AluSx SINE Alu -20 292 1 804 158 21 68 chr2 26312943 26313177 -226943406 - L1MC5 LINE L1 -173 7788 7566 479 333 102 30 chr2 26313195 26313528 -226943055 + L2 LINE L2 2880 3236 -36 700 152 6 116 chr2 26314087 26314119 -226942464 + FAM SINE Alu 4 38 -283 2136 113 0 0 chr2 26314119 26314420 -226942163 - AluSx SINE Alu -11 301 1 700 152 6 116 chr2 26314420 26314551 -226942032 + FAM SINE Alu 38 149 -36 546 221 129 150 chr2 26314653 26314795 -226941788 - L2 LINE L2 -1 3312 3169 1780 195 41 31 chr2 26314795 26315185 -226941398 + MSTD LTR MaLR 1 394 -2 1896 113 13 17 chr2 26315185 26315309 -226941274 + AluSg SINE Alu 12 135 -175 2122 84 3 20 chr2 26315309 26315606 -226940977 + AluY SINE Alu 1 292 -19 1896 113 13 17 chr2 26315606 26315781 -226940802 + AluSg SINE Alu 135 310 0 546 221 129 150 chr2 26315781 26315801 -226940782 - L2 LINE L2 -143 3170 3151 944 230 5 0 chr2 26315801 26315988 -226940595 - MER5A DNA MER1_type 0 189 2 546 221 129 150 chr2 26315988 26316203 -226940380 - L2 LINE L2 -162 3151 2941 2233 119 0 0 chr2 26316203 26316514 -226940069 + AluSx SINE Alu 1 311 -1 1967 115 0 10 chr2 26316521 26316809 -226939774 + AluSg SINE Alu 1 285 -25 1411 238 109 18 chr2 26316914 26317392 -226939191 + L1MC4 LINE L1 7178 8019 -23 2163 79 7 0 chr2 26317392 26317695 -226938888 - AluSg SINE Alu 0 305 1 23 0 0 0 chr2 26317707 26317730 -226938853 + AT_rich Low_complexity Low_complexity 1 23 0 2035 138 0 0 chr2 26317735 26318046 -226938537 + AluSx SINE Alu 1 311 -1 279 293 30 10 chr2 26318100 26318199 -226938384 + MIR3 SINE MIR 54 154 -54 1734 149 18 0 chr2 26318225 26318500 -226938083 + AluJo SINE Alu 7 286 -26 279 0 0 0 chr2 26318509 26318540 -226938043 + (CAT)n Simple_repeat Simple_repeat 2 32 0 1462 114 71 36 chr2 26318830 26319110 -226937473 + AluSq SINE Alu 18 307 -6 1445 189 0 0 chr2 26319224 26319483 -226937100 + AluJb SINE Alu 47 305 -7 21 0 0 0 chr2 26319778 26319799 -226936784 + AT_rich Low_complexity Low_complexity 1 21 0 532 207 0 0 chr2 26319801 26319888 -226936695 - AluJ/FLAM SINE Alu -221 91 5 2111 94 17 0 chr2 26319900 26320198 -226936385 - AluSx SINE Alu -9 303 1 1888 153 3 7 chr2 26320471 26320779 -226935804 + AluJo SINE Alu 1 307 -5 969 176 0 0 chr2 26320854 26321019 -226935564 - FAM SINE Alu -10 175 11 240 35 0 0 chr2 26321030 26321059 -226935524 + (A)n Simple_repeat Simple_repeat 1 29 0 1030 156 6 17 chr2 26321346 26321525 -226935058 + L1MB2 LINE L1 5949 6125 -46 216 67 0 0 chr2 26321530 26321560 -226935023 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2090 92 3 3 chr2 26321563 26321845 -226934738 - AluSp SINE Alu -31 282 1 1612 104 4 13 chr2 26321917 26322148 -226934435 + AluSg SINE Alu 4 232 -78 2134 86 3 7 chr2 26322248 26322539 -226934044 - AluSq SINE Alu -23 290 1 726 206 0 8 chr2 26322539 26322665 -226933918 - FLAM_A SINE Alu -8 125 1 23 33 0 0 chr2 26322702 26322732 -226933851 + AT_rich Low_complexity Low_complexity 1 30 0 251 233 0 17 chr2 26322833 26322893 -226933690 + L1ME LINE L1 5505 5563 -558 245 319 60 0 chr2 26322977 26323093 -226933490 + L1ME LINE L1 3 125 -5945 * 2793 225 50 17 chr2 26323079 26323329 -226933254 + L1M4 LINE L1 2674 2914 -3232 756 177 15 0 chr2 26323329 26323459 -226933124 + FLAM_C SINE Alu 2 133 0 2104 87 37 0 chr2 26323467 26323765 -226932818 + AluSp SINE Alu 4 312 -1 2793 225 50 17 chr2 26323765 26323858 -226932725 + L1M4 LINE L1 2920 3008 -3138 1931 114 17 0 chr2 26323858 26324148 -226932435 + AluSg SINE Alu 1 295 -15 1948 131 7 7 chr2 26324155 26324460 -226932123 + AluJb SINE Alu 2 306 -6 2793 225 50 17 chr2 26324460 26325017 -226931566 + L1M4 LINE L1 3013 3622 -2524 378 190 63 5 chr2 26325022 26325145 -226931438 + Tigger5 DNA MER2_type 7 194 -2129 * 412 228 13 0 chr2 26325142 26325221 -226931362 + Tigger5 DNA MER2_type 2244 2323 0 385 161 23 0 chr2 26325251 26325338 -226931245 + L1M4 LINE L1 3680 3768 -2378 183 259 32 152 chr2 26325940 26326018 -226930565 - L2 LINE L2 -4 3309 3258 1794 128 3 32 chr2 26326018 26326331 -226930252 - AluSx SINE Alu -8 304 1 183 259 32 152 chr2 26326331 26326410 -226930173 - L2 LINE L2 -55 3258 3171 2098 101 0 7 chr2 26326473 26326770 -226929813 + AluSc SINE Alu 1 295 -14 2205 100 0 3 chr2 26326836 26327147 -226929436 + AluY SINE Alu 1 310 -1 1964 131 0 0 chr2 26327149 26327465 -226929118 + AluSx SINE Alu 1 316 0 2047 97 35 3 chr2 26328259 26328548 -226928035 - AluSq SINE Alu -15 298 1 936 162 87 140 chr2 26328860 26328993 -226927590 + MER44D DNA MER2_type 1 140 -2351 1944 121 0 48 chr2 26328993 26329158 -226927425 - AluSx SINE Alu -14 298 153 2205 112 0 3 chr2 26329158 26329471 -226927112 - AluSp SINE Alu -1 312 1 1944 121 0 48 chr2 26329471 26329618 -226926965 - AluSx SINE Alu -159 153 1 936 162 87 140 chr2 26329618 26329808 -226926775 + MER44D DNA MER2_type 140 339 -2152 2218 109 0 3 chr2 26329808 26330121 -226926462 + AluSp SINE Alu 2 313 0 936 162 87 140 chr2 26330121 26330154 -226926429 + MER44D DNA MER2_type 339 609 0 1900 116 35 3 chr2 26330281 26330565 -226926018 - AluSx SINE Alu -19 293 1 2106 113 7 0 chr2 26330630 26330931 -226925652 - AluSc SINE Alu -6 303 1 942 95 7 15 chr2 26330933 26331070 -226925513 - AluSq/x SINE Alu -176 136 1 431 241 6 100 chr2 26331098 26331181 -226925402 + L1MB7 LINE L1 4672 4734 -1412 2182 92 0 0 chr2 26331181 26331513 -226925070 + AluSx SINE Alu 2 333 0 431 241 6 100 chr2 26331513 26331598 -226924985 + L1MB7 LINE L1 4734 4825 -1321 1873 132 3 36 chr2 26331598 26331902 -226924681 + AluSx SINE Alu 1 294 -18 4319 136 50 79 chr2 26331902 26332018 -226924565 + L1MB7 LINE L1 5324 5442 -742 1932 141 0 16 chr2 26332018 26332322 -226924261 + AluJb SINE Alu 1 299 -13 4319 136 50 79 chr2 26332322 26332926 -226923657 + L1MB7 LINE L1 5442 6016 -168 2030 121 3 7 chr2 26332926 26333232 -226923351 + AluSx SINE Alu 1 305 -7 4319 136 50 79 chr2 26333232 26333397 -226923186 + L1MB7 LINE L1 6016 6184 0 860 209 0 28 chr2 26333408 26333585 -226922998 + FAM SINE Alu 1 172 -3 2161 119 0 0 chr2 26333591 26333894 -226922689 + AluSx SINE Alu 1 303 -9 454 210 76 112 chr2 26333898 26334001 -226922582 + L1ME4a LINE L1 5603 5708 -413 1659 176 17 0 chr2 26334001 26334291 -226922292 - AluJo SINE Alu -17 295 1 454 210 76 112 chr2 26334291 26334411 -226922172 + L1ME4a LINE L1 5708 5818 -303 1950 95 0 41 chr2 26334425 26334748 -226921835 + AluSc SINE Alu 1 311 0 850 157 0 0 chr2 26334836 26334970 -226921613 - AluJo SINE Alu -178 134 1 491 211 66 26 chr2 26334987 26335139 -226921444 + L1ME4a LINE L1 5947 6104 -17 498 254 176 8 chr2 26335194 26335438 -226921145 - L1ME LINE L1 -436 5734 5450 406 250 18 9 chr2 26335533 26335645 -226920938 + MIR SINE MIR 21 133 -129 222 223 69 56 chr2 26336289 26336368 -226920215 - MIR SINE MIR -78 130 51 2024 111 7 17 chr2 26336398 26336695 -226919888 + AluSx SINE Alu 1 294 -18 1807 147 17 0 chr2 26336710 26337002 -226919581 + AluSx SINE Alu 1 297 -15 246 193 0 35 chr2 26337006 26337063 -226919520 - LTR54 LTR ERV1 -54 456 402 200 227 0 15 chr2 26337595 26337651 -226918932 + CT-rich Low_complexity Low_complexity 4 60 -8 1564 122 106 0 chr2 26337651 26337897 -226918686 - AluSx SINE Alu -40 272 1 1994 128 10 3 chr2 26338301 26338606 -226917977 + AluSx SINE Alu 3 309 -3 484 275 67 7 chr2 26338767 26338916 -226917667 - MIR SINE MIR -14 248 91 2132 97 3 25 chr2 26338916 26339236 -226917347 + AluSq SINE Alu 1 313 0 2051 260 31 40 chr2 26339354 26340001 -226916582 - MER21B LTR ERV1 -125 738 98 523 179 24 0 chr2 26340207 26340291 -226916292 + FRAM/FAM SINE Alu 1 79 -97 204 179 0 0 chr2 26342116 26342155 -226914428 + (CA)n Simple_repeat Simple_repeat 1 39 0 2270 94 0 0 chr2 26342892 26343191 -226913392 - AluSx SINE Alu -13 299 1 674 377 503 0 chr2 26343503 26343636 -226912947 + MER44D DNA MER2_type 1 22 -2465 1944 121 0 48 chr2 26343636 26343801 -226912782 - AluSx SINE Alu -14 298 153 2205 112 0 3 chr2 26343801 26344114 -226912469 - AluSp SINE Alu -1 312 1 1944 121 0 48 chr2 26344114 26344261 -226912322 - AluSx SINE Alu -159 153 1 674 377 503 0 chr2 26344261 26344297 -226912286 + MER44D DNA MER2_type 22 27 -2460 358 89 0 0 chr2 26344297 26344353 -226912230 + L1MA2 LINE L1 6249 6304 0 674 377 503 0 chr2 26344353 26344450 -226912133 + MER44D DNA MER2_type 27 583 -22 1941 97 4 4 chr2 26344451 26344718 -226911865 + AluSp SINE Alu 2 268 -45 374 274 0 0 chr2 26344745 26344840 -226911743 + MIR SINE MIR 167 261 -1 2006 141 0 0 chr2 26344859 26345158 -226911425 - AluSx SINE Alu -13 299 1 765 194 8 0 chr2 26345308 26345437 -226911146 - FLAM_A SINE Alu -3 130 1 2134 118 0 0 chr2 26345736 26346033 -226910550 + AluSg SINE Alu 1 297 -13 208 256 0 0 chr2 26346051 26346094 -226910489 + L2 LINE L2 3172 3214 -58 1100 161 20 5 chr2 26346166 26346365 -226910218 + AluSg/x SINE Alu 103 304 -6 1486 185 0 18 chr2 26346365 26346651 -226909932 - AluJo SINE Alu -31 281 1 248 291 63 0 chr2 26347021 26347100 -226909483 + MIR SINE MIR 41 124 -138 1375 164 0 4 chr2 26347157 26347383 -226909200 - AluSx SINE Alu -87 225 1 661 298 82 76 chr2 26347383 26347494 -226909089 - L2 LINE L2 -12 3301 3192 889 134 0 8 chr2 26347494 26347628 -226908955 - FLAM_C SINE Alu 0 133 1 661 298 82 76 chr2 26347628 26347990 -226908593 - L2 LINE L2 -121 3192 2825 601 278 21 11 chr2 26347995 26348182 -226908401 - L2 LINE L2 -1941 1373 1185 1888 133 9 46 chr2 26348401 26348573 -226908010 - AluSx SINE Alu -1 311 134 414 0 0 0 chr2 26348573 26348619 -226907964 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 2056 80 0 60 chr2 26348619 26348919 -226907664 - AluSg SINE Alu -28 282 1 2178 114 0 0 chr2 26348922 26349228 -226907355 - AluSg SINE Alu -4 306 1 2313 39 11 0 chr2 26349234 26349545 -226907038 - AluY SINE Alu 0 314 1 1888 133 9 46 chr2 26349545 26349682 -226906901 - AluSx SINE Alu -184 128 1 1659 179 3 19 chr2 26349779 26349947 -226906636 - AluJo SINE Alu -10 302 140 2082 114 0 0 chr2 26349947 26350246 -226906337 - AluSg SINE Alu -11 299 1 1659 179 3 19 chr2 26350246 26350384 -226906199 - AluJo SINE Alu -172 140 1 1985 130 0 3 chr2 26351081 26351373 -226905210 + AluSx SINE Alu 3 293 -19 666 324 32 0 chr2 26351561 26351780 -226904803 + LTR16C LTR ERVL 1 226 -265 950 227 94 72 chr2 26351797 26352025 -226904558 - MLT1H LTR MaLR -4 545 303 2127 107 3 0 chr2 26352025 26352315 -226904268 - AluSx SINE Alu -21 291 1 950 227 94 72 chr2 26352315 26352500 -226904083 - MLT1H LTR MaLR -246 303 123 449 299 6 92 chr2 26352681 26352732 -226903851 + LTR16C LTR ERVL 80 134 -357 1912 114 35 3 chr2 26352732 26353021 -226903562 - AluSp SINE Alu -15 298 1 449 299 6 92 chr2 26353021 26353143 -226903440 + LTR16C LTR ERVL 134 238 -253 1951 124 28 0 chr2 26353145 26353435 -226903148 - AluSg SINE Alu -12 298 1 1939 151 39 0 chr2 26353438 26353769 -226902814 + L1MC3 LINE L1 7418 7761 -24 364 158 158 0 chr2 26353769 26353845 -226902738 - L1MC4 LINE L1 -1340 6702 6615 300 276 35 0 chr2 26353770 26353857 -226902726 + L1MC4 LINE L1 6614 6703 -1339 * 558 217 83 0 chr2 26353859 26353979 -226902604 - FLAM_A SINE Alu -3 130 1 774 248 78 24 chr2 26354011 26354303 -226902280 + MLT1G LTR MaLR 40 325 -270 327 146 0 0 chr2 26354637 26354685 -226901898 + Alu SINE Alu 1 48 -255 * 361 89 36 0 chr2 26354683 26354739 -226901844 + MSTD LTR MaLR 284 341 -55 491 313 88 46 chr2 26354766 26355475 -226901108 + L1MEd LINE L1 636 1283 -4848 2321 67 3 0 chr2 26355475 26355775 -226900808 + AluY SINE Alu 1 301 -10 491 313 88 46 chr2 26355775 26355960 -226900623 + L1MEd LINE L1 1283 1459 -4672 2116 120 3 0 chr2 26356466 26356775 -226899808 + AluSx SINE Alu 1 310 -2 439 276 126 36 chr2 26356834 26357254 -226899329 + L1MEd LINE L1 2114 2571 -3558 2191 84 0 20 chr2 26357286 26357585 -226898998 + AluSg SINE Alu 1 293 -17 985 190 81 5 chr2 26357750 26357971 -226898612 - MIR SINE MIR -21 241 4 448 181 23 90 chr2 26358015 26358148 -226898435 + L1MEd LINE L1 2805 2928 -3201 779 105 53 0 chr2 26358411 26358525 -226898058 + MER30 DNA MER1_type 1 120 -110 216 0 0 0 chr2 26358630 26358654 -226897929 + (A)n Simple_repeat Simple_repeat 1 24 0 2166 86 10 3 chr2 26358970 26359273 -226897310 - AluSc SINE Alu -3 306 2 24 32 0 0 chr2 26359559 26359590 -226896993 + AT_rich Low_complexity Low_complexity 1 31 0 1113 102 17 34 chr2 26359595 26359741 -226896842 - AluSg/x SINE Alu -30 280 136 2386 67 3 0 chr2 26359741 26360040 -226896543 - AluSp SINE Alu -12 301 2 1113 102 17 34 chr2 26360040 26360070 -226896513 - AluSg/x SINE Alu -174 136 107 621 189 79 0 chr2 26360168 26360295 -226896288 + FLAM_C SINE Alu 2 138 -5 438 179 36 12 chr2 26360858 26360942 -226895641 - MLT1E1 LTR MaLR -50 604 519 1605 182 3 16 chr2 26361587 26361723 -226894860 + AluJb SINE Alu 1 137 -175 2235 101 0 0 chr2 26361723 26362021 -226894562 + AluSq SINE Alu 1 298 -15 1605 182 3 16 chr2 26362021 26362192 -226894391 + AluJb SINE Alu 137 304 -8 1976 115 20 0 chr2 26362380 26362676 -226893907 + AluSx SINE Alu 1 302 -10 575 198 18 0 chr2 26362780 26362891 -226893692 + AluJo SINE Alu 120 232 -80 1043 156 0 98 chr2 26363015 26363084 -226893499 + AluJb SINE Alu 86 160 -152 1969 86 43 4 chr2 26363084 26363363 -226893220 + AluSc SINE Alu 1 290 -19 1043 156 0 98 chr2 26363363 26363537 -226893046 + AluJb SINE Alu 160 305 -7 258 77 51 0 chr2 26363728 26363767 -226892816 - HAL1 LINE L1 -1940 567 527 1305 81 0 6 chr2 26364429 26364603 -226891980 - AluSp SINE Alu -10 303 131 251 276 105 41 chr2 26364782 26364953 -226891630 + L1M4 LINE L1 2855 3014 -3132 1706 147 46 0 chr2 26364953 26365238 -226891345 + AluJb SINE Alu 1 298 -14 251 276 105 41 chr2 26365238 26365580 -226891003 + L1M4 LINE L1 3014 3401 -2745 1600 52 4 48 chr2 26365776 26366006 -226890577 - L1PB1 LINE L1 0 6151 5932 861 154 87 0 chr2 26366107 26366256 -226890327 + AluSc SINE Alu 124 285 -24 1476 196 0 61 chr2 26366901 26367052 -226889531 + AluJo SINE Alu 1 125 -187 1793 177 0 0 chr2 26367052 26367340 -226889243 + AluJb SINE Alu 8 295 -17 1476 196 0 61 chr2 26367340 26367499 -226889084 + AluJo SINE Alu 125 292 -20 1718 156 23 23 chr2 26367636 26367937 -226888646 + AluJb SINE Alu 1 301 -11 827 218 14 0 chr2 26368160 26368307 -226888276 + FAM SINE Alu 1 149 -36 29 70 0 0 chr2 26368312 26368369 -226888214 + AT_rich Low_complexity Low_complexity 1 57 0 603 156 0 55 chr2 26369244 26369353 -226887230 + FLAM_C SINE Alu 24 126 -17 331 219 62 27 chr2 26369790 26369936 -226886647 + L1ME4a LINE L1 5967 6117 -4 214 316 116 21 chr2 26371775 26371870 -226884713 - MIR SINE MIR -111 151 48 405 270 50 0 chr2 26371968 26372068 -226884515 + L2 LINE L2 3162 3266 -6 2346 112 0 6 chr2 26372688 26373001 -226883582 + AluSx SINE Alu 2 312 0 512 224 100 0 chr2 26374272 26374380 -226882203 - LTR16A1 LTR ERVL -19 438 305 2026 147 3 3 chr2 26374380 26374687 -226881896 + AluSx SINE Alu 1 307 -5 512 224 100 0 chr2 26374687 26374748 -226881835 - LTR16A1 LTR ERVL -151 306 252 279 191 181 29 chr2 26374996 26375101 -226881482 - L1ME LINE L1 -295 5826 5706 315 320 10 19 chr2 26375125 26375228 -226881355 + L1MC4a LINE L1 5844 5945 -1863 311 315 0 0 chr2 26375319 26375411 -226881172 + LTR67 LTR ERVL 117 208 -349 1729 85 0 22 chr2 26375590 26375814 -226880769 - AluSq SINE Alu -94 219 1 23 0 0 0 chr2 26375827 26375850 -226880733 + AT_rich Low_complexity Low_complexity 1 23 0 189 107 0 0 chr2 26375940 26375968 -226880615 + (TG)n Simple_repeat Simple_repeat 2 29 0 1173 299 13 4 chr2 26375986 26376361 -226880222 + LTR16A LTR ERVL 16 440 -10 332 215 108 32 chr2 26376364 26376457 -226880126 + HERVL LTR ERVL 1985 2084 -2912 370 307 106 5 chr2 26376483 26376672 -226879911 + HERVL LTR ERVL 2249 2456 -2540 763 299 79 29 chr2 26376685 26377066 -226879517 + HERVL LTR ERVL 3314 3713 -2051 2112 101 104 94 chr2 26377068 26377242 -226879341 + MSTA LTR MaLR 1 172 -256 2402 84 3 10 chr2 26377242 26377552 -226879031 + AluSx SINE Alu 1 308 -4 1301 62 0 0 chr2 26377560 26377720 -226878863 + L1PA7 LINE L1 5990 6149 -5 2112 101 104 94 chr2 26377720 26377960 -226878623 + MSTA LTR MaLR 178 428 0 1607 306 16 48 chr2 26377971 26378321 -226878262 + HERVL LTR ERVL 3682 4042 -1722 1697 138 0 71 chr2 26378321 26378421 -226878162 + AluJo SINE Alu 34 139 -173 2423 109 0 0 chr2 26378421 26378724 -226877859 - AluSg SINE Alu -7 303 1 1697 138 0 71 chr2 26378724 26378906 -226877677 + AluJo SINE Alu 139 296 -16 1607 306 16 48 chr2 26378906 26379404 -226877179 + HERVL LTR ERVL 4042 4533 -1231 2356 84 3 3 chr2 26379404 26379701 -226876882 - AluSq SINE Alu -16 297 1 270 0 0 0 chr2 26379713 26379743 -226876840 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 496 335 56 14 chr2 26380435 26380650 -226875933 + HERVL LTR ERVL 4851 5074 -690 1888 183 3 0 chr2 26380650 26380961 -226875622 + AluSx SINE Alu 1 312 0 1883 98 37 0 chr2 26381119 26381363 -226875220 + AluSq SINE Alu 1 253 -60 1096 275 63 13 chr2 26381704 26382006 -226874577 + LTR16A LTR ERVL 91 407 -43 421 97 0 0 chr2 26382124 26382186 -226874397 - Alu SINE Alu -11 300 239 246 188 104 0 chr2 26382322 26382370 -226874213 - MIR SINE MIR -107 101 49 2300 86 26 10 chr2 26382374 26382678 -226873905 - AluSx SINE Alu -3 309 1 1886 143 39 26 chr2 26382751 26383058 -226873525 + AluJb SINE Alu 1 311 -1 666 146 89 24 chr2 26383184 26383307 -226873276 + FLAM_C SINE Alu 13 143 0 1674 165 59 0 chr2 26383336 26383608 -226872975 + AluJo SINE Alu 1 288 -24 1044 196 0 0 chr2 26383610 26383789 -226872794 + AluJb SINE Alu 131 309 -3 2139 95 0 0 chr2 26383801 26384065 -226872518 + AluSx SINE Alu 1 264 -48 2444 66 7 0 chr2 26384141 26384429 -226872154 - AluSp SINE Alu -18 295 6 2098 95 3 69 chr2 26385286 26385603 -226870980 + AluSp SINE Alu 1 296 -17 1100 172 0 0 chr2 26385764 26385938 -226870645 - AluSg/x SINE Alu -4 306 133 1931 152 7 20 chr2 26386072 26386375 -226870208 - AluJo SINE Alu -13 299 1 2476 84 0 0 chr2 26386573 26386870 -226869713 + AluSq SINE Alu 1 297 -16 1148 148 25 10 chr2 26387123 26387319 -226869264 + AluSg/x SINE Alu 114 312 0 648 206 6 77 chr2 26387338 26387508 -226869075 + FRAM SINE Alu 8 165 -11 2060 117 0 11 chr2 26387558 26387881 -226868702 + AluSx SINE Alu 7 326 0 2229 115 3 16 chr2 26387997 26388133 -226868450 + AluSx SINE Alu 1 137 -175 2297 88 7 0 chr2 26388133 26388428 -226868155 + AluSg SINE Alu 1 297 -13 2229 115 3 16 chr2 26388428 26388595 -226867988 + AluSx SINE Alu 137 300 -12 2158 85 4 11 chr2 26388595 26388867 -226867716 + AluSq SINE Alu 1 270 -43 2420 72 7 0 chr2 26389024 26389316 -226867267 + AluY SINE Alu 1 294 -17 750 191 71 0 chr2 26389623 26389749 -226866834 - FRAM SINE Alu -25 151 17 979 170 6 22 chr2 26389792 26389974 -226866609 + AluJb SINE Alu 129 307 -5 1554 153 78 3 chr2 26389997 26390279 -226866304 + AluJo SINE Alu 1 303 -9 746 173 11 17 chr2 26390285 26390464 -226866119 + GA-rich Low_complexity Low_complexity 3 180 0 215 74 0 0 chr2 26390465 26390492 -226866091 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 885 182 296 9 chr2 26390667 26391008 -226865575 + L1MC4 LINE L1 7604 8042 0 1204 189 130 11 chr2 26391016 26391286 -226865297 + AluJb SINE Alu 1 302 0 2065 108 0 4 chr2 26391415 26391683 -226864900 + AluSx SINE Alu 6 272 -40 1618 106 4 38 chr2 26391685 26391920 -226864663 - AluSx SINE Alu -84 228 2 2385 102 0 13 chr2 26391929 26392243 -226864340 - AluSq SINE Alu -3 310 1 195 210 321 12 chr2 26392323 26392404 -226864179 + MER5B DNA MER1_type 1 106 -72 261 180 0 0 chr2 26392616 26392666 -226863917 + A-rich Low_complexity Low_complexity 1 50 0 331 258 175 0 chr2 26393055 26393152 -226863431 + L2 LINE L2 3143 3256 -16 2275 80 3 33 chr2 26393731 26394033 -226862550 + AluY SINE Alu 1 293 -18 30 0 0 0 chr2 26394034 26394064 -226862519 + AT_rich Low_complexity Low_complexity 1 30 0 1329 98 14 115 chr2 26394156 26394237 -226862346 + L1MA1 LINE L1 6035 6123 -179 231 114 0 0 chr2 26394237 26394272 -226862311 + (TG)n Simple_repeat Simple_repeat 2 36 0 1329 98 14 115 chr2 26394272 26394285 -226862298 + L1MA1 LINE L1 6123 6136 -166 2315 89 7 0 chr2 26394285 26394567 -226862016 - AluSq SINE Alu -17 296 13 1329 98 14 115 chr2 26394567 26394708 -226861875 + L1MA1 LINE L1 6136 6240 -62 2084 139 0 0 chr2 26394708 26395003 -226861580 + AluSx SINE Alu 1 295 -17 1329 98 14 115 chr2 26395003 26395052 -226861531 + L1MA1 LINE L1 6240 6292 -10 42 15 0 44 chr2 26395052 26395089 -226861494 + AT_rich Low_complexity Low_complexity 1 38 -27 2454 72 0 0 chr2 26395089 26395381 -226861202 - AluY SINE Alu -19 292 1 2477 75 13 0 chr2 26395381 26395688 -226860895 - AluSx SINE Alu -1 311 1 42 15 0 44 chr2 26395688 26395717 -226860866 + AT_rich Low_complexity Low_complexity 36 65 0 581 257 90 0 chr2 26396352 26396496 -226860087 - MIR3 SINE MIR -7 201 45 386 297 173 17 chr2 26398837 26399035 -226857548 - MIR SINE MIR -10 252 27 245 167 0 21 chr2 26399128 26399176 -226857407 + MER57A LTR ERV1 291 337 -66 270 267 35 0 chr2 26399711 26399797 -226856786 + MER96 DNA MER1_type? 87 175 0 202 293 106 78 chr2 26399858 26400020 -226856563 + L2 LINE L2 2545 2701 -613 2177 126 0 0 chr2 26400020 26400322 -226856261 + AluSx SINE Alu 1 302 -10 202 293 106 78 chr2 26400322 26400490 -226856093 + L2 LINE L2 2701 2884 -430 965 81 8 0 chr2 26400516 26400639 -226855944 + AluSp SINE Alu 3 126 -187 188 135 27 0 chr2 26400745 26400782 -226855801 + A-rich Low_complexity Low_complexity 5 42 0 2551 86 0 3 chr2 26401262 26401615 -226854968 + AluSx SINE Alu 1 352 0 1693 236 107 14 chr2 26401615 26402165 -226854418 + L1ME3 LINE L1 5040 5692 -478 2092 177 19 11 chr2 26402165 26402527 -226854056 + MLT1A1 LTR MaLR 1 365 0 1693 236 107 14 chr2 26402527 26402757 -226853826 + L1ME3 LINE L1 5692 5899 -271 1067 79 0 0 chr2 26402773 26402899 -226853684 + AluSq/x SINE Alu 1 126 -187 192 40 0 0 chr2 26402899 26402924 -226853659 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 325 204 58 78 chr2 26402935 26403038 -226853545 + L1ME3 LINE L1 5872 5972 -190 458 276 161 52 chr2 26403603 26403820 -226852763 - L2 LINE L2 -10 3262 3005 2322 104 0 0 chr2 26403820 26404118 -226852465 + AluSg SINE Alu 1 298 -12 458 276 161 52 chr2 26404118 26404186 -226852397 - L2 LINE L2 -267 3005 2946 1942 116 49 0 chr2 26404233 26404517 -226852066 - AluSx SINE Alu -14 298 1 661 278 30 47 chr2 26404687 26404798 -226851785 + MIR SINE MIR 29 140 -122 2558 71 0 0 chr2 26404798 26405095 -226851488 + AluSp SINE Alu 1 297 -16 661 278 30 47 chr2 26405095 26405217 -226851366 + MIR SINE MIR 140 258 -4 2309 100 3 0 chr2 26405330 26405621 -226850962 - AluSq SINE Alu -15 298 7 2286 114 3 0 chr2 26405629 26405937 -226850646 - AluSq SINE Alu -4 309 1 2067 123 10 3 chr2 26406068 26406360 -226850223 + AluSx SINE Alu 1 294 -18 962 173 24 12 chr2 26406575 26406743 -226849840 - AluJo SINE Alu -98 214 45 215 227 0 0 chr2 26406743 26406787 -226849796 + L2 LINE L2 3262 3305 -8 583 316 106 56 chr2 26406856 26407251 -226849332 - L3 LINE CR1 -104 1473 1059 1632 178 43 33 chr2 26407427 26407533 -226849050 + AluJo SINE Alu 1 104 -208 2383 84 0 3 chr2 26407533 26407830 -226848753 + AluY SINE Alu 1 296 -15 1632 178 43 33 chr2 26407830 26408026 -226848557 + AluJo SINE Alu 104 306 -6 695 281 50 46 chr2 26408046 26408349 -226848234 + L1ME LINE L1 5375 5678 -484 2192 114 3 16 chr2 26408545 26408860 -226847723 + AluSx SINE Alu 1 311 -1 276 0 0 0 chr2 26408887 26408919 -226847664 - L1MA1 LINE L1 -58 6244 6213 2454 89 0 0 chr2 26409054 26409356 -226847227 - AluSq SINE Alu -11 302 1 2032 134 14 0 chr2 26409568 26409860 -226846723 + AluSg SINE Alu 1 296 -14 2005 132 0 4 chr2 26409966 26410239 -226846344 - AluSx SINE Alu -40 272 1 25 40 0 20 chr2 26410249 26410268 -226846315 + AT_rich Low_complexity Low_complexity 1 19 -30 2196 107 3 10 chr2 26410268 26410567 -226846016 - AluSq SINE Alu -16 297 1 25 40 0 20 chr2 26410567 26410597 -226845986 + AT_rich Low_complexity Low_complexity 19 49 0 924 141 0 0 chr2 26410649 26410784 -226845799 + FLAM_C SINE Alu 1 135 -8 325 167 0 0 chr2 26410902 26410956 -226845627 - Charlie5 DNA MER1_type -2550 62 9 973 200 0 0 chr2 26411070 26411235 -226845348 - FRAM SINE Alu -12 164 1 1786 163 24 3 chr2 26411300 26411595 -226844988 + AluJo SINE Alu 1 301 -11 350 282 77 17 chr2 26411917 26412034 -226844549 + L2 LINE L2 3189 3312 -1 2331 103 0 10 chr2 26412177 26412488 -226844095 + AluSx SINE Alu 1 308 -4 2351 101 7 0 chr2 26412542 26412849 -226843734 + AluSq SINE Alu 1 309 -4 2035 133 3 36 chr2 26413272 26413574 -226843009 + AluJo SINE Alu 1 292 -20 714 143 0 0 chr2 26413593 26413698 -226842885 + U6 snRNA snRNA 1 105 -2 1555 211 28 11 chr2 26413703 26414063 -226842520 + L1MB3 LINE L1 5315 5680 -500 247 146 21 21 chr2 26414063 26414111 -226842472 + Alu SINE Alu 1 48 -251 1335 179 4 17 chr2 26414216 26414451 -226842132 + AluJb SINE Alu 72 303 -9 2209 182 65 0 chr2 26414451 26414895 -226841688 + L1MB3 LINE L1 5670 6142 -41 1207 138 46 63 chr2 26414894 26415193 -226841390 + L1MB2 LINE L1 5890 6148 -23 * 297 255 137 57 chr2 26415431 26415555 -226841028 - MIR3 SINE MIR 0 208 53 2173 124 0 0 chr2 26415555 26415853 -226840730 - AluSq SINE Alu -15 298 1 297 255 137 57 chr2 26415853 26415910 -226840673 - MIR3 SINE MIR -155 53 2 406 329 110 58 chr2 26416259 26416551 -226840032 + L2 LINE L2 2957 3263 -9 1947 105 0 0 chr2 26416620 26416868 -226839715 - AluSx SINE Alu -64 248 1 222 265 213 52 chr2 26417189 26417251 -226839332 + MER5B DNA MER1_type 1 52 -126 753 220 0 0 chr2 26417251 26417383 -226839200 + FLAM_A SINE Alu 1 132 -1 222 265 213 52 chr2 26417383 26417456 -226839127 + MER5B DNA MER1_type 52 158 -20 182 258 136 15 chr2 26417492 26417558 -226839025 - MIR SINE MIR -105 157 84 265 349 110 0 chr2 26417609 26417718 -226838865 + L2 LINE L2 3118 3238 -34 1874 181 10 0 chr2 26417783 26418092 -226838491 + AluJb SINE Alu 1 312 0 1146 119 12 0 chr2 26418932 26419092 -226837491 + AluSg/x SINE Alu 137 298 -14 2411 85 10 0 chr2 26419498 26419805 -226836778 - AluSp SINE Alu -3 310 1 391 41 107 8 chr2 26419870 26419991 -226836592 + (TA)n Simple_repeat Simple_repeat 2 134 0 309 195 51 93 chr2 26419992 26420110 -226836473 - L1MCa LINE L1 -4362 2064 1952 2197 139 0 0 chr2 26420577 26420880 -226835703 + AluSx SINE Alu 1 303 -9 377 169 28 42 chr2 26420882 26420953 -226835630 - L1MCa LINE L1 -4362 2064 1995 525 55 0 0 chr2 26420953 26421026 -226835557 + (GA)n Simple_repeat Simple_repeat 2 74 0 1446 187 4 26 chr2 26421035 26421303 -226835280 - AluJb SINE Alu -50 262 1 285 159 125 45 chr2 26421303 26421391 -226835192 - L1MC5 LINE L1 -414 7547 7453 2082 152 0 0 chr2 26421437 26421734 -226834849 + AluJb SINE Alu 1 297 -15 763 332 50 4 chr2 26421757 26422037 -226834546 + L3 LINE CR1 834 1126 -451 2175 129 0 0 chr2 26422359 26422654 -226833929 + AluSx SINE Alu 1 295 -17 1555 134 110 7 chr2 26422733 26423155 -226833428 + LTR54 LTR ERV1 4 495 -3 2262 117 0 0 chr2 26423313 26423613 -226832970 - AluSc SINE Alu -9 300 1 1697 182 14 7 chr2 26423613 26423899 -226832684 - AluJo SINE Alu -23 289 2 624 274 48 12 chr2 26423929 26424097 -226832486 - MIR SINE MIR -50 212 39 320 307 10 30 chr2 26425108 26425209 -226831374 + MIR SINE MIR 4 102 -160 515 253 27 16 chr2 26425215 26425401 -226831182 - L1MC5 LINE L1 -35 7926 7739 2333 98 3 0 chr2 26425402 26425697 -226830886 - AluSx SINE Alu -12 300 5 2017 154 3 3 chr2 26425720 26426032 -226830551 - AluJb SINE Alu 0 312 1 331 255 123 0 chr2 26426036 26426142 -226830441 + MIR SINE MIR 104 222 -40 1088 103 18 36 chr2 26426177 26426193 -226830390 + AluSg/x SINE Alu 120 135 -181 1847 163 3 7 chr2 26426193 26426482 -226830101 + AluJo SINE Alu 3 290 -22 1088 103 18 36 chr2 26426482 26426665 -226829918 + AluSg/x SINE Alu 135 316 0 498 186 47 31 chr2 26427064 26427193 -226829390 - LTR67 LTR ERVL 0 557 427 1162 120 0 0 chr2 26427414 26427572 -226829011 + AluSg/x SINE Alu 153 310 0 1428 100 0 25 chr2 26427713 26427732 -226828851 - AluSg/x SINE Alu -1 311 293 1218 82 0 6 chr2 26427732 26427902 -226828681 - L1MA1 LINE L1 0 6302 6134 1428 100 0 25 chr2 26427902 26428082 -226828501 - AluSg/x SINE Alu -19 293 117 1076 152 0 0 chr2 26428182 26428333 -226828250 - AluJb SINE Alu -24 288 138 2372 92 3 3 chr2 26428613 26428919 -226827664 - AluSp SINE Alu -7 306 1 2382 68 0 0 chr2 26429248 26429569 -226827014 - AluY SINE Alu 0 321 1 320 59 20 0 chr2 26429573 26429624 -226826959 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 2414 82 0 3 chr2 26430216 26430509 -226826074 - AluSc SINE Alu -17 292 1 1719 179 0 10 chr2 26430511 26430807 -226825776 - AluJb SINE Alu -19 293 1 2184 126 7 0 chr2 26430816 26431117 -226825466 - AluSx SINE Alu -9 303 1 339 257 76 38 chr2 26431489 26431594 -226824989 + MIR3 SINE MIR 57 165 -43 2027 169 0 0 chr2 26431607 26431909 -226824674 + AluJb SINE Alu 5 306 -6 657 164 0 10 chr2 26431918 26432022 -226824561 + AluSq/x SINE Alu 2 104 -209 2018 133 7 3 chr2 26432086 26432379 -226824204 + AluSx SINE Alu 1 294 -18 598 132 97 14 chr2 26432502 26432646 -226823937 - L1MA4 LINE L1 -3 6297 6142 2195 117 0 7 chr2 26432701 26432992 -226823591 - AluSc SINE Alu -20 289 1 769 214 83 0 chr2 26433004 26433172 -226823411 + AluJo SINE Alu 115 296 -16 715 174 16 0 chr2 26433186 26433307 -226823276 - FLAM_A SINE Alu -10 123 1 2261 100 17 0 chr2 26433555 26433844 -226822739 + AluSx SINE Alu 1 294 -18 2282 101 13 0 chr2 26434344 26434651 -226821932 + AluSq SINE Alu 3 313 0 327 104 0 0 chr2 26434694 26434742 -226821841 + (A)n Simple_repeat Simple_repeat 1 48 0 2046 104 11 14 chr2 26436830 26437117 -226819466 - AluSx SINE Alu -25 287 2 933 256 91 21 chr2 26437117 26437503 -226819080 - L1M4 LINE L1 -3371 2775 2363 1853 146 3 61 chr2 26437651 26437979 -226818604 - AluJb SINE Alu -3 309 1 320 320 64 19 chr2 26438444 26438600 -226817983 + MIR SINE MIR 65 227 -35 355 272 37 63 chr2 26438872 26439063 -226817520 - L1ME1 LINE L1 -46 6120 5935 234 0 0 0 chr2 26439075 26439101 -226817482 + (T)n Simple_repeat Simple_repeat 1 26 0 934 85 30 12 chr2 26439203 26439367 -226817216 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 2442 81 0 31 chr2 26439375 26439782 -226816801 - AluY SINE Alu 0 397 1 2232 130 0 0 chr2 26439785 26440093 -226816490 - AluSx SINE Alu -4 308 1 749 158 23 17 chr2 26440115 26440292 -226816291 + CT-rich Low_complexity Low_complexity 1 178 0 2078 120 40 0 chr2 26440306 26440605 -226815978 - AluSp SINE Alu -1 312 2 883 175 44 38 chr2 26440611 26440794 -226815789 - AluJo SINE Alu -6 306 123 2163 145 0 0 chr2 26441163 26441466 -226815117 + AluSx SINE Alu 1 303 -9 186 230 32 143 chr2 26441667 26441793 -226814790 + MIR SINE MIR 36 147 -61 329 294 0 68 chr2 26442010 26442156 -226814427 - MIR SINE MIR -50 212 77 2137 107 21 3 chr2 26442180 26442470 -226814113 - AluSx SINE Alu -17 295 1 300 281 12 24 chr2 26442651 26442733 -226813850 - L2 LINE L2 -546 2768 2688 259 246 29 0 chr2 26442734 26442803 -226813780 + CT-rich Low_complexity Low_complexity 6 76 0 222 324 73 0 chr2 26443508 26443576 -226813007 + L2 LINE L2 3231 3303 -10 200 35 35 0 chr2 26443580 26443609 -226812974 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 27 29 0 0 chr2 26444640 26444674 -226811909 + AT_rich Low_complexity Low_complexity 1 34 0 2211 122 0 0 chr2 26444723 26445019 -226811564 + AluSq SINE Alu 1 296 -17 2366 89 0 0 chr2 26445020 26445313 -226811270 + AluSc SINE Alu 1 293 -16 321 26 0 0 chr2 26445332 26445370 -226811213 + (TAA)n Simple_repeat Simple_repeat 1 38 0 1447 164 116 40 chr2 26445375 26445650 -226810933 + AluJb SINE Alu 1 296 -16 1597 106 0 14 chr2 26445765 26445982 -226810601 + AluSg SINE Alu 1 214 -96 2288 132 0 0 chr2 26446018 26446328 -226810255 + AluSg SINE Alu 1 310 0 919 150 0 0 chr2 26446379 26446512 -226810071 + FLAM_C SINE Alu 1 133 0 231 362 21 11 chr2 26446669 26446763 -226809820 + MIR SINE MIR 19 113 -149 721 245 70 10 chr2 26446763 26446963 -226809620 - MLT1K LTR MaLR 0 588 377 2366 82 0 26 chr2 26446985 26447288 -226809295 - AluY SINE Alu -16 295 1 2433 99 0 6 chr2 26447291 26447604 -226808979 - AluSq SINE Alu -2 311 1 409 318 161 0 chr2 26447605 26447828 -226808755 - MLT1K LTR MaLR -320 268 10 2161 135 0 0 chr2 26448164 26448460 -226808123 + AluSx SINE Alu 1 296 -16 794 179 0 0 chr2 26448512 26448629 -226807954 + FLAM_C SINE Alu 2 118 -15 381 22 0 0 chr2 26448631 26448677 -226807906 + (TG)n Simple_repeat Simple_repeat 1 46 0 2096 111 4 7 chr2 26448677 26448957 -226807626 - AluSx SINE Alu -33 279 1 183 385 33 0 chr2 26449167 26449258 -226807325 + L2 LINE L2 3168 3261 -11 749 180 16 0 chr2 26449282 26449404 -226807179 + FLAM_A SINE Alu 1 124 -9 2094 133 0 3 chr2 26449424 26449758 -226806825 + AluSx SINE Alu 1 333 0 405 262 148 0 chr2 26450397 26450519 -226806064 + MER91C DNA MER1_type 1 140 0 2236 209 86 36 chr2 26450797 26451139 -226805444 + L1ME3A LINE L1 5456 5779 -391 2303 100 3 0 chr2 26451139 26451430 -226805153 + AluSq SINE Alu 5 296 -17 2306 97 7 0 chr2 26451431 26451740 -226804843 + AluY SINE Alu 1 311 0 2236 209 86 36 chr2 26451740 26451761 -226804822 + L1ME3A LINE L1 5779 5797 -373 2332 100 3 13 chr2 26451761 26452072 -226804511 + AluSp SINE Alu 1 308 -5 2236 209 86 36 chr2 26452072 26452378 -226804205 + L1ME3A LINE L1 5797 6162 -8 646 252 61 49 chr2 26452372 26452618 -226803965 + L1MEc LINE L1 8 256 -6140 * 398 248 39 78 chr2 26452631 26452656 -226803927 + L1MEc LINE L1 390 414 -5982 1463 164 118 8 chr2 26452656 26452918 -226803665 - AluSg1 SINE Alu -18 291 1 398 248 39 78 chr2 26452918 26453098 -226803485 + L1MEc LINE L1 414 587 -5809 455 241 70 82 chr2 26453354 26453512 -226803071 + L2 LINE L2 3158 3313 0 2268 101 0 31 chr2 26454216 26454533 -226802050 + AluSg SINE Alu 1 307 -3 1368 74 0 0 chr2 26455140 26455302 -226801281 + AluY SINE Alu 1 162 -149 719 290 65 0 chr2 26455600 26455845 -226800738 + AluSx SINE Alu 50 310 -2 1100 165 6 0 chr2 26455991 26456161 -226800422 - FRAM SINE Alu -13 163 1 795 164 138 13 chr2 26457000 26457152 -226799431 - AluJb SINE Alu -16 296 126 2243 114 7 0 chr2 26457636 26457925 -226798658 - AluSx SINE Alu -17 295 5 587 302 33 6 chr2 26458365 26458547 -226798036 - MIR SINE MIR -56 206 20 287 324 63 9 chr2 26458898 26459009 -226797574 + MIR SINE MIR 35 151 -111 1756 155 0 63 chr2 26459048 26459391 -226797192 + AluJb SINE Alu 1 324 0 287 300 33 8 chr2 26460097 26460217 -226796366 - MIR3 SINE MIR -5 203 81 2499 89 0 0 chr2 26460344 26460647 -226795936 - AluSx SINE Alu -9 303 1 211 189 0 0 chr2 26460674 26460711 -226795872 - MIR SINE MIR -87 121 85 739 30 10 30 chr2 26460917 26461018 -226795565 + L1PB1 LINE L1 6053 6151 0 357 246 96 32 chr2 26461031 26461159 -226795424 - HAL1b LINE L1 -2 6104 1238 2120 141 10 0 chr2 26461242 26461539 -226795044 - AluSx SINE Alu -12 300 1 514 282 85 77 chr2 26461704 26461909 -226794674 + MIR SINE MIR 2 211 -51 2336 113 3 0 chr2 26461909 26462219 -226794364 + AluSq SINE Alu 1 311 -2 514 282 85 77 chr2 26462219 26462272 -226794311 + MIR SINE MIR 211 262 0 2104 108 0 49 chr2 26462367 26462514 -226794069 + AluSc SINE Alu 1 154 -155 2555 70 0 0 chr2 26462514 26462815 -226793768 + AluY SINE Alu 1 301 -10 2104 108 0 49 chr2 26462815 26462991 -226793592 + AluSc SINE Alu 154 308 -1 1609 180 0 59 chr2 26463225 26463548 -226793035 - AluJo SINE Alu -6 306 3 292 285 32 8 chr2 26464352 26464475 -226792108 + CT-rich Low_complexity Low_complexity 2 127 0 301 336 100 0 chr2 26464638 26464748 -226791835 - L3 LINE CR1 -25 1552 1432 493 171 0 122 chr2 26464751 26464795 -226791788 - L1MA10 LINE L1 -13 6321 6273 2404 103 0 0 chr2 26464795 26465095 -226791488 + AluSx SINE Alu 1 300 -12 493 171 0 122 chr2 26465095 26465173 -226791410 - L1MA10 LINE L1 -61 6273 6214 181 292 67 56 chr2 26465176 26465265 -226791318 - L3 LINE CR1 -162 1415 1326 434 266 77 14 chr2 26465520 26465580 -226791003 - MIR SINE MIR 0 262 207 2426 87 0 6 chr2 26465580 26465891 -226790692 - AluSc SINE Alu 0 309 1 972 135 0 0 chr2 26465891 26466024 -226790559 - AluJo/FLAM SINE Alu -169 133 1 434 266 77 14 chr2 26466024 26466105 -226790478 - MIR SINE MIR -54 208 111 2367 101 3 0 chr2 26466268 26466564 -226790019 + AluSp SINE Alu 1 297 -16 2035 140 0 3 chr2 26466682 26466974 -226789609 - AluJb SINE Alu -10 302 12 706 299 65 13 chr2 26467071 26467200 -226789383 + MIR SINE MIR 20 141 -121 2397 92 0 0 chr2 26467200 26467503 -226789080 + AluY SINE Alu 1 303 -8 706 299 65 13 chr2 26467503 26467604 -226788979 + MIR SINE MIR 141 262 0 2117 110 10 3 chr2 26468100 26468390 -226788193 + AluSq SINE Alu 1 292 -21 199 239 56 42 chr2 26469672 26469743 -226786840 - MIR SINE MIR -59 149 78 531 246 46 56 chr2 26469773 26469968 -226786615 + MIR SINE MIR 20 212 -50 506 293 42 31 chr2 26471055 26471246 -226785337 - MIR3 SINE MIR -12 196 4 338 268 71 27 chr2 26471362 26471474 -226785109 + MIR SINE MIR 30 146 -62 246 136 0 0 chr2 26472685 26472729 -226783854 + (CCA)n Simple_repeat Simple_repeat 2 45 0 206 269 0 0 chr2 26474045 26474097 -226782486 + (CCG)n Simple_repeat Simple_repeat 1 52 0 208 230 0 27 chr2 26474193 26474267 -226782316 + G-rich Low_complexity Low_complexity 3 74 0 384 256 41 123 chr2 26475133 26475352 -226781231 + MIR SINE MIR 11 211 -51 2110 112 0 0 chr2 26476194 26476488 -226780095 + AluSc SINE Alu 1 294 -15 255 288 0 14 chr2 26476490 26476563 -226780020 + MIR SINE MIR 82 153 -109 900 174 6 6 chr2 26476569 26476730 -226779853 + FRAM SINE Alu 1 157 -19 251 342 47 13 chr2 26476859 26477008 -226779575 + L2 LINE L2 2816 2969 -303 1491 166 10 71 chr2 26477031 26477207 -226779376 - AluJo SINE Alu -23 289 139 2093 87 33 3 chr2 26477207 26477506 -226779077 + AluSg SINE Alu 1 308 -2 1491 166 10 71 chr2 26477506 26477637 -226778946 - AluJo SINE Alu -173 139 1 519 159 11 0 chr2 26477710 26477798 -226778785 + AluJ/FLAM SINE Alu 2 90 -222 192 339 0 0 chr2 26477827 26477886 -226778697 + L2 LINE L2 1851 1909 -1405 815 284 107 84 chr2 26477890 26478359 -226778224 + L2 LINE L2 2172 2629 -643 1902 129 6 58 chr2 26478359 26478684 -226777899 + AluSq SINE Alu 1 308 -5 815 284 107 84 chr2 26478684 26478708 -226777875 + L2 LINE L2 2629 2651 -621 1585 176 13 20 chr2 26478708 26479009 -226777574 + AluJo SINE Alu 1 299 -13 815 284 107 84 chr2 26479009 26479023 -226777560 + L2 LINE L2 2651 2663 -609 2090 114 0 10 chr2 26479023 26479330 -226777253 + AluSx SINE Alu 1 304 -8 815 284 107 84 chr2 26479330 26479371 -226777212 + L2 LINE L2 2663 2702 -570 2203 84 7 3 chr2 26479371 26479668 -226776915 + AluSc SINE Alu 1 298 -11 815 284 107 84 chr2 26479668 26479690 -226776893 + L2 LINE L2 2702 2722 -550 1972 130 0 3 chr2 26479690 26479983 -226776600 - AluSc SINE Alu -17 292 1 815 284 107 84 chr2 26479983 26480493 -226776090 + L2 LINE L2 2722 3271 -1 784 159 0 8 chr2 26480569 26480695 -226775888 + AluJb SINE Alu 2 126 -186 1751 164 3 0 chr2 26480921 26481214 -226775369 + AluJb SINE Alu 3 296 -16 22 80 0 0 chr2 26481231 26481281 -226775302 + AT_rich Low_complexity Low_complexity 1 50 0 2314 76 0 17 chr2 26481303 26481604 -226774979 - AluSp SINE Alu -17 296 1 396 0 0 0 chr2 26481636 26481680 -226774903 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 1985 97 49 3 chr2 26481691 26481979 -226774604 + AluSq SINE Alu 1 301 -12 343 304 48 30 chr2 26482063 26482231 -226774352 - MIR SINE MIR -50 212 42 1809 138 0 3 chr2 26482402 26482705 -226773878 + AluSx SINE Alu 1 302 0 830 181 0 0 chr2 26482882 26483015 -226773568 + FLAM_C SINE Alu 1 133 0 1997 94 44 10 chr2 26483020 26483317 -226773266 + AluSx SINE Alu 1 307 -5 1088 278 59 45 chr2 26484082 26484395 -226772188 + L2 LINE L2 2464 2771 -542 2254 109 0 3 chr2 26484395 26484707 -226771876 + AluSx SINE Alu 1 311 -1 1088 278 59 45 chr2 26484707 26485174 -226771409 + L2 LINE L2 2771 3264 -49 2122 106 0 3 chr2 26485174 26485475 -226771108 + AluSc SINE Alu 1 300 -9 1088 278 59 45 chr2 26485475 26485526 -226771057 + L2 LINE L2 3264 3313 0 1773 158 16 22 chr2 26485561 26485872 -226770711 - AluJb SINE Alu -3 309 1 2250 81 3 0 chr2 26485910 26486208 -226770375 - AluSp SINE Alu -14 299 1 1127 132 6 0 chr2 26487001 26487168 -226769415 - AluSp SINE Alu -27 286 119 2582 33 0 0 chr2 26487323 26487623 -226768960 - AluY SINE Alu -11 300 1 545 151 23 0 chr2 26487834 26487920 -226768663 - FLAM_C SINE Alu -19 124 37 24 32 0 0 chr2 26487934 26487965 -226768618 + AT_rich Low_complexity Low_complexity 1 31 0 2415 79 0 0 chr2 26488127 26488431 -226768152 + AluSp SINE Alu 1 304 -9 774 144 0 8 chr2 26488683 26488801 -226767782 - FLAM_C SINE Alu -25 118 2 4654 176 65 57 chr2 26488974 26489488 -226767095 - L1MD2 LINE L1 0 6359 5851 2016 104 0 21 chr2 26489488 26489806 -226766777 - AluSx SINE Alu 0 312 1 2129 101 0 26 chr2 26489808 26490116 -226766467 - AluSx SINE Alu -12 300 1 4654 176 65 57 chr2 26490116 26490691 -226765892 - L1MD2 LINE L1 -508 5851 5266 1416 168 95 4 chr2 26490691 26490965 -226765618 + AluJb SINE Alu 1 299 -13 4654 176 65 57 chr2 26490965 26491332 -226765251 - L1MD2 LINE L1 -1093 5266 4903 2076 104 37 0 chr2 26491483 26491782 -226764801 - AluSq SINE Alu -3 310 1 1383 234 122 54 chr2 26491914 26492597 -226763986 - HAL1 LINE L1 -443 2064 1336 458 259 53 159 chr2 26492608 26492729 -226763854 - HAL1 LINE L1 -1344 1163 1031 1164 210 126 8 chr2 26492729 26492991 -226763592 - AluJb SINE Alu -9 293 1 1688 145 3 68 chr2 26492996 26493320 -226763263 - AluJb SINE Alu -8 304 2 458 259 53 159 chr2 26493320 26493550 -226763033 - HAL1 LINE L1 -1480 1027 774 2051 90 0 30 chr2 26493550 26493850 -226762733 + AluSc SINE Alu 1 291 -18 2330 70 0 3 chr2 26493860 26494160 -226762423 + AluSg SINE Alu 1 299 -11 458 259 53 159 chr2 26494160 26494185 -226762398 - HAL1 LINE L1 -1742 765 739 1548 178 0 27 chr2 26494185 26494478 -226762105 + AluJo SINE Alu 6 290 -22 458 259 53 159 chr2 26494478 26494916 -226761667 - HAL1 LINE L1 -1768 739 419 2016 94 56 3 chr2 26495800 26496086 -226760497 - AluSg SINE Alu -9 301 1 207 182 0 0 chr2 26496086 26496119 -226760464 + T-rich Low_complexity Low_complexity 5 37 0 2261 91 0 19 chr2 26496120 26496438 -226760145 - AluSx SINE Alu 0 312 1 1009 96 0 0 chr2 26496438 26496574 -226760009 - AluSq/x SINE Alu -176 136 1 392 222 46 9 chr2 26496747 26496855 -226759728 - L1MC4 LINE L1 -3 8039 7928 1014 171 0 0 chr2 26496913 26497077 -226759506 + AluJb SINE Alu 131 294 -18 267 333 32 24 chr2 26497159 26497285 -226759298 - L2 LINE L2 -3 3269 3143 1056 134 6 34 chr2 26497435 26497476 -226759107 - AluSx SINE Alu -138 174 133 1943 128 14 3 chr2 26497476 26497773 -226758810 - AluSx SINE Alu -12 300 1 1056 134 6 34 chr2 26497773 26497910 -226758673 - AluSx SINE Alu -179 133 1 1878 149 17 0 chr2 26497979 26498275 -226758308 - AluJo SINE Alu -11 301 1 2146 114 0 0 chr2 26498275 26498581 -226758002 - AluSc SINE Alu -3 306 1 1563 184 24 3 chr2 26498718 26499006 -226757577 - AluJo SINE Alu -18 294 1 320 295 181 31 chr2 26499144 26499367 -226757216 - L2 LINE L2 -896 2418 2129 958 157 48 6 chr2 26499367 26499533 -226757050 + FAM SINE Alu 1 173 -2 320 295 181 31 chr2 26499533 26499634 -226756949 - L2 LINE L2 -1185 2129 2045 183 42 0 0 chr2 26499701 26499725 -226756858 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 1798 134 0 3 chr2 26499725 26500008 -226756575 - AluSx SINE Alu -30 282 1 210 277 170 7 chr2 26500012 26500153 -226756430 + MIR SINE MIR 94 257 -5 937 269 87 42 chr2 26500156 26500491 -226756092 + L2 LINE L2 2440 2789 -525 697 203 0 30 chr2 26500505 26500638 -226755945 - FLAM_A SINE Alu -5 137 9 911 250 115 44 chr2 26500724 26501108 -226755475 + L2 LINE L2 2889 3299 -14 188 234 0 21 chr2 26501179 26501226 -226755357 + MIR SINE MIR 210 255 -7 244 211 333 26 chr2 26501361 26501475 -226755108 - L2 LINE L2 0 3313 3165 1031 167 28 3 chr2 26501624 26501825 -226754758 + L1MB2 LINE L1 5551 5758 -413 791 109 67 124 chr2 26501820 26502030 -226754553 + L1MB2 LINE L1 5971 6168 -3 * 603 246 19 119 chr2 26502275 26502355 -226754228 - MIR SINE MIR -15 247 161 2264 63 14 0 chr2 26502355 26502672 -226753911 - AluY SINE Alu 0 311 1 603 246 19 119 chr2 26502672 26502859 -226753724 - MIR SINE MIR -101 161 7 1756 146 0 34 chr2 26503178 26503501 -226753082 - AluJb SINE Alu 0 312 1 1013 233 111 30 chr2 26503504 26503775 -226752808 - AluJo SINE Alu -9 293 1 759 187 193 0 chr2 26503851 26504022 -226752561 - AluJb SINE Alu -22 290 87 21 36 0 0 chr2 26504239 26504267 -226752316 + AT_rich Low_complexity Low_complexity 1 28 0 1934 138 0 10 chr2 26504481 26504805 -226751778 + AluSx SINE Alu 2 312 0 2110 123 0 0 chr2 26504917 26505217 -226751366 + AluSq SINE Alu 1 300 -13 1136 242 184 37 chr2 26505386 26505888 -226750695 - L1MC4 LINE L1 0 8042 7421 1465 135 0 32 chr2 26505888 26506140 -226750443 - AluSx SINE Alu -22 290 47 1136 242 184 37 chr2 26506140 26506289 -226750294 - L1MC4 LINE L1 -621 7421 7295 1356 150 32 80 chr2 26506418 26506731 -226749852 - AluJb SINE Alu -14 298 1 1442 158 0 50 chr2 26506849 26507146 -226749437 + AluJo SINE Alu 1 282 -30 201 147 0 0 chr2 26507290 26507324 -226749259 + (A)n Simple_repeat Simple_repeat 1 34 0 25 0 0 0 chr2 26507431 26507456 -226749127 + AT_rich Low_complexity Low_complexity 1 25 0 351 196 9 89 chr2 26507523 26507635 -226748948 + MER114 LTR ERV 546 648 0 2197 109 106 0 chr2 26508519 26508858 -226747725 - THE1C LTR MaLR 0 375 1 2182 107 3 0 chr2 26508862 26509161 -226747422 - AluSx SINE Alu -7 305 6 882 146 0 0 chr2 26509164 26509301 -226747282 - AluJo SINE Alu -175 137 1 286 270 158 67 chr2 26510131 26510505 -226746078 - L2 LINE L2 -241 3072 2661 341 248 124 0 chr2 26510683 26510788 -226745795 + MIR3 SINE MIR 37 154 -54 1943 102 43 33 chr2 26511483 26511786 -226744797 + AluSg SINE Alu 1 306 -4 1942 137 0 3 chr2 26511798 26512091 -226744492 - AluSx SINE Alu -20 292 1 211 289 186 0 chr2 26512645 26512742 -226743841 - MIR SINE MIR -100 162 48 2448 186 146 19 chr2 26512913 26513490 -226743093 + Charlie1a DNA MER1_type 1 652 -799 2182 101 0 3 chr2 26513490 26513787 -226742796 + AluSx SINE Alu 1 296 -16 825 188 0 0 chr2 26513824 26513973 -226742610 + FRAM SINE Alu 20 168 -8 2475 170 100 106 chr2 26513977 26514221 -226742362 + Charlie1a DNA MER1_type 650 894 -1867 2037 109 3 0 chr2 26514221 26514504 -226742079 + AluSc SINE Alu 1 284 -25 210 37 0 0 chr2 26514511 26514538 -226742045 + (TAA)n Simple_repeat Simple_repeat 3 29 0 2475 170 100 106 chr2 26514538 26515096 -226741487 + Charlie1a DNA MER1_type 900 1455 0 452 288 40 17 chr2 26515587 26515751 -226740832 - LTR33A LTR ERVL -361 185 24 2226 107 0 13 chr2 26516486 26516803 -226739780 - AluSq SINE Alu 0 313 1 700 203 222 24 chr2 26516829 26517036 -226739547 + MIR SINE MIR 8 255 -7 533 237 147 30 chr2 26518175 26518407 -226738176 - MIR SINE MIR -2 260 2 2249 74 30 0 chr2 26518746 26519045 -226737538 + AluSq SINE Alu 1 308 -5 2083 137 0 0 chr2 26519782 26520082 -226736501 + AluY SINE Alu 1 300 -11 2201 221 65 0 chr2 26520102 26520623 -226735960 + L1M4 LINE L1 4310 4864 -1282 321 256 236 20 chr2 26520668 26520922 -226735661 + L1MEc LINE L1 1237 1545 -4851 3108 198 78 74 chr2 26520922 26520992 -226735591 + L1MC4a LINE L1 6240 6308 -1500 1904 158 11 0 chr2 26520992 26521277 -226735306 + AluSx SINE Alu 1 288 -24 3108 198 78 74 chr2 26521277 26521395 -226735188 + L1MC4a LINE L1 6308 6424 -1384 368 70 0 18 chr2 26521395 26521452 -226735131 + (CA)n Simple_repeat Simple_repeat 2 57 0 3108 198 78 74 chr2 26521452 26521744 -226734839 + L1MC4a LINE L1 6424 6713 -1095 2000 137 27 0 chr2 26521744 26522044 -226734539 - AluJo SINE Alu -4 308 1 3108 198 78 74 chr2 26522044 26522526 -226734057 + L1MC4a LINE L1 6713 7208 -600 303 179 0 0 chr2 26522577 26522633 -226733950 + L1MD3 LINE L1 7599 7654 -341 962 147 125 85 chr2 26522641 26522865 -226733718 - AluJo SINE Alu -60 252 20 1950 190 82 74 chr2 26522894 26523016 -226733567 + L1MD3 LINE L1 7405 7524 -471 2452 107 42 20 chr2 26523016 26523370 -226733213 + THE1B LTR MaLR 1 362 -2 1950 190 82 74 chr2 26523370 26523831 -226732752 + L1MD3 LINE L1 7524 7993 -2 1470 226 63 52 chr2 26523863 26524403 -226732180 + L1MEc LINE L1 1531 2076 -4320 1113 169 111 43 chr2 26524399 26524678 -226731905 + L1MEc LINE L1 2357 2654 -3561 * 1850 237 152 30 chr2 26524675 26525447 -226731136 + L1MEc LINE L1 3535 4400 -1815 212 156 0 89 chr2 26525471 26525561 -226731022 + C-rich Low_complexity Low_complexity 5 86 0 978 146 0 7 chr2 26525574 26525725 -226730858 - AluSg/x SINE Alu -38 272 123 1128 145 0 6 chr2 26525728 26525900 -226730683 - AluSx SINE Alu -138 174 4 796 190 42 14 chr2 26525903 26526119 -226730464 + L1MEc LINE L1 4388 4609 -1606 720 274 85 0 chr2 26526121 26526322 -226730261 + L2 LINE L2 2864 3081 -232 258 171 85 49 chr2 26527209 26527291 -226729292 + L1MEc LINE L1 5189 5273 -942 2150 120 3 3 chr2 26527291 26527591 -226728992 + AluSx SINE Alu 1 300 -12 612 144 0 0 chr2 26527610 26527707 -226728876 + MER50 LTR ERV1 508 604 -130 308 219 37 12 chr2 26527717 26527799 -226728784 + L1MEc LINE L1 5262 5345 -870 2340 96 7 7 chr2 26527799 26528102 -226728481 + AluSp SINE Alu 1 303 -10 1597 137 122 11 chr2 26528117 26528379 -226728204 + AluSq SINE Alu 1 291 -22 3384 180 60 62 chr2 26528379 26529223 -226727360 + L1MB5 LINE L1 5323 6165 -9 356 307 200 9 chr2 26529244 26529459 -226727124 + MIR SINE MIR 7 262 0 235 274 0 32 chr2 26529459 26529506 -226727077 + (CTG)n Simple_repeat Simple_repeat 2 48 -13 2198 96 4 0 chr2 26529506 26529786 -226726797 - AluSq SINE Alu -32 281 1 235 274 0 32 chr2 26529786 26529800 -226726783 + (CTG)n Simple_repeat Simple_repeat 48 61 0 404 209 76 9 chr2 26529810 26529915 -226726668 + MIR SINE MIR 125 236 -26 254 292 67 11 chr2 26529995 26530084 -226726499 - MIR SINE MIR -70 138 45 2033 88 0 39 chr2 26530722 26531007 -226725576 - AluSg SINE Alu -36 274 1 2282 105 7 0 chr2 26531227 26531523 -226725060 + AluSx SINE Alu 1 298 -14 390 240 127 75 chr2 26531903 26532170 -226724413 - HAL1 LINE L1 -379 2128 1848 901 268 175 2 chr2 26532230 26532681 -226723902 - HAL1 LINE L1 -789 1718 1190 1786 170 0 23 chr2 26532736 26533042 -226723541 + AluSx SINE Alu 1 299 -13 247 315 18 64 chr2 26533476 26533695 -226722888 - L2 LINE L2 -353 2961 2753 963 251 212 40 chr2 26533697 26533974 -226722609 - L2 LINE L2 -1004 2310 2082 2170 135 0 0 chr2 26533974 26534278 -226722305 + AluSx SINE Alu 1 304 -8 963 251 212 40 chr2 26534278 26534346 -226722237 - L2 LINE L2 -1232 2082 2027 549 0 0 0 chr2 26534346 26534407 -226722176 + (TG)n Simple_repeat Simple_repeat 2 62 0 963 251 212 40 chr2 26534407 26534559 -226722024 - L2 LINE L2 -1287 2027 1726 1745 177 23 16 chr2 26535963 26536273 -226720310 - AluJb SINE Alu 0 312 1 184 79 79 0 chr2 26536303 26536341 -226720242 + (CATTT)n Simple_repeat Simple_repeat 2 42 0 2260 108 0 0 chr2 26536341 26536636 -226719947 - AluSq SINE Alu -18 295 1 2111 121 0 0 chr2 26536654 26536943 -226719640 - AluSx SINE Alu -23 289 1 344 279 48 0 chr2 26537051 26537155 -226719428 - L1MEd LINE L1 -5406 713 605 362 265 103 101 chr2 26537208 26537410 -226719173 - L1MEd LINE L1 -5680 439 239 2450 71 0 0 chr2 26537410 26537704 -226718879 + AluY SINE Alu 1 294 -17 1776 171 7 3 chr2 26537713 26538017 -226718566 + AluJb SINE Alu 1 305 -7 362 265 103 101 chr2 26538017 26538231 -226718352 - L1MEd LINE L1 -5887 232 12 477 104 0 0 chr2 26538471 26538548 -226718035 + (TGGA)n Simple_repeat Simple_repeat 1 77 0 1697 206 105 75 chr2 26538814 26539024 -226717559 - L1M4 LINE L1 -3128 3018 2816 1804 149 27 7 chr2 26539024 26539319 -226717264 + AluJb SINE Alu 1 301 -11 1697 206 105 75 chr2 26539319 26539358 -226717225 - L1M4 LINE L1 -3330 2816 2780 2252 99 0 13 chr2 26539358 26539661 -226716922 - AluSx SINE Alu -12 300 2 1697 206 105 75 chr2 26539661 26540047 -226716536 - L1M4 LINE L1 -3366 2780 2363 1816 146 3 61 chr2 26540163 26540523 -226716060 - AluJb SINE Alu 0 341 1 366 310 65 13 chr2 26540988 26541143 -226715440 + MIR SINE MIR 65 227 -35 771 197 43 64 chr2 26541373 26541606 -226714977 - L1ME1 LINE L1 -5 6161 5934 2483 74 0 7 chr2 26541617 26541926 -226714657 - AluY SINE Alu -4 307 1 450 276 97 25 chr2 26542964 26543160 -226713423 - L2 LINE L2 -96 3217 3008 356 276 95 9 chr2 26543183 26543299 -226713284 - L2 LINE L2 -2 3311 3186 374 258 208 6 chr2 26544252 26544430 -226712153 + L2 LINE L2 3100 3313 0 2538 74 0 0 chr2 26544513 26544822 -226711761 - AluY SINE Alu -2 309 1 246 281 104 21 chr2 26545175 26545271 -226711312 - MIR SINE MIR -138 124 21 206 254 0 79 chr2 26545280 26545343 -226711240 + L2 LINE L2 3215 3272 0 4516 162 46 26 chr2 26545663 26546822 -226709761 - L1MB8 LINE L1 0 6178 4995 2441 70 0 0 chr2 26546822 26547121 -226709462 - AluY SINE Alu -12 299 1 4516 162 46 26 chr2 26547121 26547240 -226709343 - L1MB8 LINE L1 -1183 4995 4880 299 200 53 13 chr2 26547243 26547318 -226709265 - L2 LINE L2 -566 2748 2671 534 287 84 45 chr2 26547349 26547453 -226709130 - L2 LINE L2 -1225 2089 1990 2071 117 50 13 chr2 26547453 26547752 -226708831 + AluSx SINE Alu 1 310 -2 534 287 84 45 chr2 26547752 26547792 -226708791 - L2 LINE L2 -1324 1990 1953 1829 196 20 12 chr2 26547792 26548134 -226708449 + MER7A DNA MER2_type 1 343 -3 534 287 84 45 chr2 26548134 26548298 -226708285 - L2 LINE L2 -1361 1953 1768 2208 206 47 58 chr2 26548304 26548688 -226707895 + L1MD2 LINE L1 4614 5001 -1358 2170 122 3 0 chr2 26548688 26548984 -226707599 + AluSx SINE Alu 1 297 -15 2208 206 47 58 chr2 26548984 26549048 -226707535 + L1MD2 LINE L1 5001 5064 -1295 2315 113 0 0 chr2 26549048 26549350 -226707233 + AluSx SINE Alu 1 302 -10 2208 206 47 58 chr2 26549350 26549598 -226706985 + L1MD2 LINE L1 5064 5313 -1046 2304 97 0 13 chr2 26549598 26549907 -226706676 + AluSq SINE Alu 1 305 -8 2208 206 47 58 chr2 26549907 26550893 -226705690 + L1MD2 LINE L1 5313 6349 -10 2025 128 7 0 chr2 26550964 26551294 -226705289 - AluSx SINE Alu 0 332 1 333 185 93 9 chr2 26551296 26551404 -226705179 - L2 LINE L2 -1604 1710 1594 21 36 0 0 chr2 26551599 26551627 -226704956 + AT_rich Low_complexity Low_complexity 1 28 0 2205 119 0 3 chr2 26552139 26552441 -226704142 + AluSx SINE Alu 1 301 -11 2002 164 0 10 chr2 26552780 26553090 -226703493 - AluSx SINE Alu -5 307 1 26 0 0 0 chr2 26553367 26553393 -226703190 + AT_rich Low_complexity Low_complexity 1 26 0 2435 67 3 7 chr2 26553407 26553706 -226702877 + AluSp SINE Alu 1 298 -15 2048 260 31 40 chr2 26553843 26554490 -226702093 - MER21B LTR ERV1 -125 738 98 1040 177 0 0 chr2 26554704 26554862 -226701721 + FRAM SINE Alu 4 161 -15 2118 121 3 13 chr2 26554883 26555189 -226701394 + AluSq SINE Alu 1 303 -10 4613 209 63 41 chr2 26555209 26555375 -226701208 + L1MB7 LINE L1 3776 3937 -2209 2244 103 0 3 chr2 26555375 26555666 -226700917 + AluSx SINE Alu 1 290 -22 4613 209 63 41 chr2 26555666 26556693 -226699890 + L1MB7 LINE L1 3937 5000 -1146 1925 149 9 44 chr2 26556693 26557009 -226699574 + AluJb SINE Alu 1 305 -7 4613 209 63 41 chr2 26557009 26557060 -226699523 + L1MB7 LINE L1 5000 5048 -1098 267 221 13 26 chr2 26557061 26557138 -226699445 + L1MB7 LINE L1 5129 5204 -942 3402 167 50 31 chr2 26557138 26557855 -226698728 + L1MB7 LINE L1 5454 6184 0 294 150 0 0 chr2 26557889 26557929 -226698654 + Tigger2 DNA MER2_type 1 40 -2678 2135 99 0 30 chr2 26557945 26558247 -226698336 - AluSg SINE Alu -13 297 5 24 0 0 0 chr2 26558256 26558280 -226698303 + AT_rich Low_complexity Low_complexity 1 24 0 652 240 0 8 chr2 26558280 26558401 -226698182 - FLAM_A SINE Alu -13 120 1 622 200 38 81 chr2 26558402 26558605 -226697978 - MER8 DNA MER2_type -33 206 12 2552 68 0 0 chr2 26558633 26558940 -226697643 - AluY SINE Alu -4 307 1 424 139 0 38 chr2 26558940 26559019 -226697564 - FLAM_C SINE Alu 0 143 68 2400 63 0 25 chr2 26559417 26559734 -226696849 + AluY SINE Alu 3 311 0 2235 92 3 3 chr2 26560062 26560354 -226696229 - AluSg SINE Alu -18 292 1 543 153 24 0 chr2 26560408 26560493 -226696090 - AluJb SINE Alu -22 290 204 323 220 94 29 chr2 26560708 26560845 -226695738 + MER20 DNA MER1_type 3 219 0 1725 161 27 34 chr2 26561209 26561507 -226695076 + AluJo SINE Alu 1 296 -16 1577 194 27 3 chr2 26561609 26561902 -226694681 - AluJo SINE Alu -11 301 2 2407 86 0 3 chr2 26562673 26562974 -226693609 - AluY SINE Alu -11 300 1 2066 140 0 0 chr2 26563001 26563294 -226693289 - AluSx SINE Alu -17 295 3 14449 129 95 22 chr2 26563410 26563440 -226693143 + Tigger2 DNA MER2_type 26 52 -2666 784 173 0 16 chr2 26563440 26563567 -226693016 - FLAM_A SINE Alu -8 125 1 14449 129 95 22 chr2 26563567 26564431 -226692152 + Tigger2 DNA MER2_type 52 852 -1866 2574 47 7 0 chr2 26564431 26564731 -226691852 + AluY SINE Alu 1 302 -9 14449 129 95 22 chr2 26564731 26566346 -226690237 + Tigger2 DNA MER2_type 852 2718 0 968 185 0 5 chr2 26566440 26566663 -226689920 - AluJo SINE Alu 0 344 123 4858 186 59 12 chr2 26566669 26567519 -226689064 - L1MB3 LINE L1 0 6183 5375 1712 156 7 21 chr2 26567519 26567801 -226688782 - AluJb SINE Alu -3 309 32 4858 186 59 12 chr2 26567801 26568380 -226688203 - L1MB3 LINE L1 -808 5375 4676 1772 133 3 53 chr2 26568380 26568682 -226687901 + AluSx SINE Alu 1 287 -25 4858 186 59 12 chr2 26568682 26568765 -226687818 - L1MB3 LINE L1 -1507 4676 4598 2134 160 9 0 chr2 26570156 26570487 -226686096 - MER1B DNA MER1_type 0 339 6 2355 94 3 0 chr2 26571075 26571382 -226685201 + AluSc SINE Alu 1 308 -1 25 31 0 0 chr2 26571452 26571484 -226685099 + AT_rich Low_complexity Low_complexity 1 32 0 602 236 115 0 chr2 26572394 26572551 -226684032 - FAM SINE Alu 0 175 1 1013 205 120 27 chr2 26572563 26572822 -226683761 - AluJo SINE Alu -18 294 12 1134 113 148 15 chr2 26573256 26573459 -226683124 + MER30 DNA MER1_type 1 230 0 335 275 146 87 chr2 26573620 26573907 -226682676 - L1MC4a LINE L1 -1634 6174 5871 841 270 69 73 chr2 26573928 26574343 -226682240 - L1MC4a LINE L1 -1992 5816 5402 2107 97 3 0 chr2 26574343 26574631 -226681952 - AluSq SINE Alu -18 295 7 841 270 69 73 chr2 26574631 26574738 -226681845 - L1MC4a LINE L1 -2406 5402 5296 33 0 0 0 chr2 26575246 26575279 -226681304 + AT_rich Low_complexity Low_complexity 1 33 0 1053 216 80 31 chr2 26575367 26575691 -226680892 + L1ME3 LINE L1 5822 6161 -1 2245 103 0 0 chr2 26575746 26576058 -226680525 - AluSx SINE Alu 0 312 1 344 233 120 8 chr2 26576059 26576192 -226680391 - L1ME4a LINE L1 -6 6115 5968 1573 161 4 7 chr2 26576227 26576501 -226680082 - AluJo SINE Alu -39 273 1 2371 55 0 22 chr2 26579925 26580237 -226676346 + AluY SINE Alu 1 305 -6 2341 67 10 0 chr2 26580242 26580541 -226676042 + AluSx SINE Alu 1 302 -10 2427 87 0 0 chr2 26580795 26581106 -226675477 + AluSx SINE Alu 2 312 0 303 277 0 0 chr2 26581694 26581759 -226674824 - MIR SINE MIR -152 110 46 2396 64 6 3 chr2 26582540 26582852 -226673731 - AluSp SINE Alu 0 313 1 2244 83 0 3 chr2 26582868 26583169 -226673414 - AluSc SINE Alu -9 300 1 1562 206 125 91 chr2 26583516 26584205 -226672378 + L1MC5 LINE L1 6731 7442 -519 1931 122 0 7 chr2 26584365 26584653 -226671930 - AluSx SINE Alu -26 286 1 1588 175 0 45 chr2 26584793 26585101 -226671482 + AluJb SINE Alu 1 294 -18 601 273 172 60 chr2 26585244 26585628 -226670955 - LTR67 LTR ERVL -129 428 2 193 208 146 0 chr2 26585633 26585681 -226670902 + MER5B DNA MER1_type 1 55 -123 644 218 8 0 chr2 26585696 26585820 -226670763 + FLAM_C SINE Alu 7 131 -12 250 243 184 19 chr2 26585823 26585926 -226670657 - MER5B DNA MER1_type -55 123 4 328 278 28 28 chr2 26585944 26586052 -226670531 + MER5A DNA MER1_type 9 116 -73 196 331 86 36 chr2 26586230 26586369 -226670214 + L2 LINE L2 3122 3267 -5 2045 112 23 0 chr2 26586505 26586808 -226669775 + AluSx SINE Alu 3 312 0 2193 104 0 0 chr2 26586812 26587109 -226669474 + AluSg SINE Alu 1 297 -13 353 297 104 91 chr2 26587456 26588069 -226668514 + HAL1 LINE L1 45 665 -1842 1025 160 11 0 chr2 26588226 26588407 -226668176 + AluSc SINE Alu 127 309 0 502 260 114 62 chr2 26588471 26588698 -226667885 + HAL1 LINE L1 874 1112 -1395 2074 116 0 38 chr2 26588699 26589018 -226667565 + AluSx SINE Alu 1 307 -5 603 86 0 0 chr2 26589018 26589099 -226667484 + MSTD LTR MaLR 316 396 0 448 247 107 27 chr2 26589149 26589299 -226667284 + HAL1 LINE L1 1611 1772 -735 398 240 39 10 chr2 26589483 26589587 -226666996 + L2 LINE L2 3201 3307 -6 1498 188 18 3 chr2 26589587 26589869 -226666714 + AluJo SINE Alu 1 286 -26 243 0 0 0 chr2 26589869 26589875 -226666708 + (TG)n Simple_repeat Simple_repeat 1 33 0 243 0 0 0 chr2 26589875 26589902 -226666681 + (TG)n Simple_repeat Simple_repeat 2 28 0 228 226 89 97 chr2 26590002 26590126 -226666457 + L1MEd LINE L1 25 147 -5972 2056 94 0 4 chr2 26590245 26590521 -226666062 - AluSx SINE Alu -17 295 21 1004 261 35 32 chr2 26590521 26590831 -226665752 + L2 LINE L2 3002 3312 -1 207 0 0 0 chr2 26590989 26591012 -226665571 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 780 179 21 0 chr2 26591044 26591184 -226665399 + AluJb SINE Alu 2 144 -168 2079 99 26 10 chr2 26591838 26592141 -226664442 - AluSg SINE Alu -2 308 1 1979 140 0 6 chr2 26592850 26593164 -226663419 - AluSx SINE Alu 0 312 1 21 57 0 0 chr2 26593177 26593212 -226663371 + AT_rich Low_complexity Low_complexity 1 35 0 766 97 0 0 chr2 26593212 26593315 -226663268 - AluSg/x SINE Alu -14 296 194 2153 111 0 0 chr2 26593370 26593668 -226662915 + AluSx SINE Alu 1 298 -14 1156 145 0 0 chr2 26593671 26593843 -226662740 + AluJo/FRAM SINE Alu 129 300 -12 11673 172 30 28 chr2 26594046 26595265 -226661318 + L1MB1 LINE L1 2737 3952 -2216 2262 99 7 3 chr2 26595265 26595569 -226661014 + AluSx SINE Alu 1 305 -7 11673 172 30 28 chr2 26595569 26597520 -226659063 + L1MB1 LINE L1 3952 5916 -252 2237 108 3 0 chr2 26597520 26597827 -226658756 + AluSq SINE Alu 1 308 -5 11673 172 30 28 chr2 26597827 26598047 -226658536 + L1MB1 LINE L1 5916 6134 -34 1544 127 42 81 chr2 26598047 26598354 -226658229 + AluJo SINE Alu 1 295 -17 1927 117 7 0 chr2 26598403 26598717 -226657866 - AluSq SINE Alu 0 316 1 4315 146 28 79 chr2 26598741 26598981 -226657602 + L1MB5 LINE L1 5272 5523 -651 2266 67 3 3 chr2 26598981 26599280 -226657303 + AluY SINE Alu 1 299 -12 4315 146 28 79 chr2 26599280 26599909 -226656674 + L1MB5 LINE L1 5523 6092 -82 1926 150 0 16 chr2 26599909 26600222 -226656361 - AluJo SINE Alu -4 308 1 4315 146 28 79 chr2 26600222 26600302 -226656281 + L1MB5 LINE L1 6092 6174 0 1597 118 18 109 chr2 26600352 26600683 -226655900 - MER50 LTR ERV1 -1 733 433 1313 131 13 42 chr2 26600677 26600798 -226655785 - MER50 LTR ERV1 -505 229 117 * 2197 95 0 25 chr2 26600798 26601113 -226655470 + AluSx SINE Alu 1 307 -5 1313 131 13 42 chr2 26601113 26601227 -226655356 - MER50 LTR ERV1 -617 117 1 2144 125 0 0 chr2 26601254 26601566 -226655017 + AluSx SINE Alu 1 312 0 1670 83 8 43 chr2 26601828 26602082 -226654501 + AluSx SINE Alu 51 295 -17 1462 201 3 15 chr2 26602311 26602640 -226653943 - L1M4 LINE L1 -1033 5113 4789 2475 55 7 0 chr2 26602776 26603085 -226653498 - AluY SINE Alu 0 311 1 1767 100 130 0 chr2 26603231 26603492 -226653091 - AluSx SINE Alu -17 295 1 1948 113 44 0 chr2 26603571 26603864 -226652719 + AluSx SINE Alu 1 306 -6 2154 111 0 0 chr2 26605182 26605488 -226651095 + AluSx SINE Alu 2 307 -5 732 189 8 0 chr2 26606023 26606150 -226650433 + FLAM_A SINE Alu 2 129 -4 21 36 0 0 chr2 26606150 26606178 -226650405 + AT_rich Low_complexity Low_complexity 1 28 0 1574 167 36 16 chr2 26607022 26607328 -226649255 - AluJo SINE Alu 0 312 1 1897 189 27 30 chr2 26607363 26607611 -226648972 + MER63B DNA MER1_type 1 249 -813 918 172 12 0 chr2 26607611 26607774 -226648809 + FRAM SINE Alu 1 165 -1 1897 189 27 30 chr2 26607774 26607926 -226648657 + MER63B DNA MER1_type 249 400 -36 1983 130 7 0 chr2 26607940 26608240 -226648343 - AluSx SINE Alu -10 302 1 1893 138 10 0 chr2 26608550 26608848 -226647735 - AluJb SINE Alu -11 301 1 2404 87 0 3 chr2 26608855 26609167 -226647416 - AluSq SINE Alu -2 311 1 388 181 58 106 chr2 26609198 26609386 -226647197 + L1MC5 LINE L1 7206 7384 -577 329 167 76 0 chr2 26609393 26609459 -226647124 + MER63B DNA MER1_type 327 397 -38 233 178 0 0 chr2 26609460 26609505 -226647078 + L1MC5 LINE L1 7395 7439 -522 2020 130 0 13 chr2 26609517 26609818 -226646765 - AluSx SINE Alu -10 302 6 523 186 124 0 chr2 26609894 26610007 -226646576 + FLAM_A SINE Alu 1 127 -6 570 165 148 9 chr2 26610053 26610168 -226646415 + AluJo/FLAM SINE Alu 3 133 -179 1955 111 47 3 chr2 26610170 26610468 -226646115 + AluSx SINE Alu 1 311 -1 490 170 28 0 chr2 26610471 26610577 -226646006 + L1MB8 LINE L1 6064 6172 -6 261 119 0 51 chr2 26610582 26610641 -226645942 + Alu SINE Alu 247 302 0 244 291 57 51 chr2 26610660 26610818 -226645765 + L1MC5 LINE L1 7778 7936 -25 1793 131 4 0 chr2 26611120 26611388 -226645195 - AluJb SINE Alu -16 296 28 2111 80 0 100 chr2 26612586 26612925 -226643658 - AluSx SINE Alu -7 305 1 420 307 7 7 chr2 26613145 26613295 -226643288 + MIR3 SINE MIR 34 183 -25 1283 76 4 143 chr2 26613439 26613677 -226642906 + AluSx SINE Alu 48 252 -60 2011 120 0 7 chr2 26613918 26614227 -226642356 + AluSx SINE Alu 1 307 -5 242 250 208 0 chr2 26614467 26614563 -226642020 + MIR SINE MIR 34 149 -113 469 187 0 101 chr2 26614836 26615034 -226641549 + G-rich Low_complexity Low_complexity 1 178 0 184 80 0 93 chr2 26615069 26615144 -226641439 + (CGGGGG)n Simple_repeat Simple_repeat 2 69 0 38 101 0 0 chr2 26615171 26615300 -226641283 + GC_rich Low_complexity Low_complexity 1 129 0 202 270 0 27 chr2 26615691 26615765 -226640818 + C-rich Low_complexity Low_complexity 2 73 0 240 35 0 0 chr2 26617160 26617189 -226639394 + (CA)n Simple_repeat Simple_repeat 1 29 0 399 276 26 0 chr2 26619194 26619310 -226637273 - MIR3 SINE MIR -52 156 38 374 338 93 0 chr2 26619434 26619585 -226636998 - MIR SINE MIR -12 250 86 735 171 16 0 chr2 26619599 26619728 -226636855 - FLAM_C SINE Alu -2 131 1 1713 113 35 0 chr2 26619755 26620011 -226636572 - AluSq SINE Alu -48 265 1 1043 183 30 104 chr2 26620377 26620705 -226635878 + AluJo SINE Alu 9 312 0 200 189 0 0 chr2 26620960 26620997 -226635586 + G-rich Low_complexity Low_complexity 3 39 0 634 236 28 7 chr2 26621401 26621545 -226635038 - MIR SINE MIR -114 148 2 256 246 0 14 chr2 26621994 26622063 -226634520 + G-rich Low_complexity Low_complexity 5 72 0 2021 109 3 3 chr2 26622697 26623001 -226633582 - AluSx SINE Alu 0 304 1 284 281 94 31 chr2 26623216 26623376 -226633207 + L2 LINE L2 2715 2884 -430 319 310 140 29 chr2 26623560 26623731 -226632852 + L2 LINE L2 3124 3313 0 1885 132 11 0 chr2 26623782 26624069 -226632514 + AluJo SINE Alu 1 290 -22 322 232 160 8 chr2 26624559 26624684 -226631899 - MIR3 SINE MIR -12 196 53 1689 138 14 7 chr2 26625530 26625829 -226630754 + AluJo SINE Alu 5 305 0 185 330 223 0 chr2 26626062 26626174 -226630409 - MIR SINE MIR -74 188 52 36 82 0 0 chr2 26626466 26626551 -226630032 + GC_rich Low_complexity Low_complexity 1 85 0 228 189 0 40 chr2 26627048 26627122 -226629461 + (CCCG)n Simple_repeat Simple_repeat 4 74 0 24 32 0 0 chr2 26627178 26627209 -226629374 + GC_rich Low_complexity Low_complexity 1 31 0 387 113 50 75 chr2 26627727 26627807 -226628776 - MER103 DNA DNA -42 124 47 2049 111 3 13 chr2 26628778 26629084 -226627499 + AluSx SINE Alu 1 303 -9 183 162 0 0 chr2 26629752 26629789 -226626794 + CT-rich Low_complexity Low_complexity 2 38 0 509 27 147 0 chr2 26634242 26634317 -226622266 + L1PA7 LINE L1 6069 6154 0 1525 97 202 0 chr2 26634589 26634846 -226621737 + AluJb SINE Alu 1 309 -3 803 188 0 0 chr2 26635379 26635512 -226621071 - FLAM_A SINE Alu 0 133 1 879 175 40 11 chr2 26637823 26638000 -226618583 + MER5A DNA MER1_type 1 182 -7 229 248 67 60 chr2 26637867 26638016 -226618567 - MER5A DNA MER1_type -31 158 9 * 340 302 135 10 chr2 26638133 26638325 -226618258 - MIR SINE MIR -13 249 34 567 179 50 25 chr2 26638474 26638615 -226617968 - L1ME2 LINE L1 -9 6155 6033 457 194 107 10 chr2 26638615 26638718 -226617865 - MER81 DNA DNA -1 113 1 567 179 50 25 chr2 26638718 26638731 -226617852 - L1ME2 LINE L1 -131 6033 6022 719 109 0 0 chr2 26640454 26640555 -226616028 - AluSg/x SINE Alu -6 303 203 633 284 71 76 chr2 26640556 26640855 -226615728 + L3 LINE CR1 637 935 -642 1534 173 0 65 chr2 26640855 26640981 -226615602 + AluJo SINE Alu 5 138 -174 2068 110 0 10 chr2 26640981 26641280 -226615303 - AluSg SINE Alu -14 296 1 1534 173 0 65 chr2 26641280 26641476 -226615107 + AluJo SINE Alu 138 306 -6 633 284 71 76 chr2 26641476 26641556 -226615027 + L3 LINE CR1 935 1014 -563 593 212 18 0 chr2 26641647 26641760 -226614823 + MLT1H LTR MaLR 81 195 -354 26 30 0 0 chr2 26641787 26641820 -226614763 + AT_rich Low_complexity Low_complexity 1 33 0 254 196 22 0 chr2 26642031 26642077 -226614506 + MLT1G1 LTR MaLR 479 525 -70 198 103 0 0 chr2 26642220 26642249 -226614334 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2149 105 0 3 chr2 26642820 26643116 -226613467 - AluSg SINE Alu -15 295 1 247 276 245 36 chr2 26643445 26643641 -226612942 - MIR SINE MIR -6 256 20 2211 81 0 23 chr2 26643873 26644183 -226612400 - AluSg1 SINE Alu -6 303 1 1856 157 7 0 chr2 26644543 26644837 -226611746 + AluSx SINE Alu 1 296 -16 23 0 0 0 chr2 26646400 26646423 -226610160 + AT_rich Low_complexity Low_complexity 1 23 0 1573 155 10 27 chr2 26646668 26646965 -226609618 - AluJo SINE Alu -13 299 8 223 268 14 14 chr2 26646992 26647063 -226609520 + L2 LINE L2 2589 2659 -655 186 322 42 56 chr2 26647173 26647316 -226609267 + L2 LINE L2 3169 3309 -4 231 241 146 36 chr2 26647552 26647622 -226608961 + L1MC/D LINE L1 5100 5161 -985 1582 133 72 29 chr2 26647622 26647901 -226608682 + AluSg SINE Alu 1 291 -19 231 241 146 36 chr2 26647901 26648104 -226608479 + L1MC/D LINE L1 5161 5403 -743 861 128 0 0 chr2 26648104 26648221 -226608362 + FLAM_C SINE Alu 2 118 -15 255 278 192 45 chr2 26648241 26648311 -226608272 + L1MC/D LINE L1 5380 5438 -2370 2222 109 0 0 chr2 26648311 26648613 -226607970 - AluSq SINE Alu -11 302 1 255 278 192 45 chr2 26648613 26648876 -226607707 + L1MC/D LINE L1 5438 5762 -2046 1560 211 0 0 chr2 26649000 26649294 -226607289 + AluJo SINE Alu 1 294 -18 1301 130 19 10 chr2 26651111 26651318 -226605265 - MER20 DNA MER1_type -8 211 3 572 296 12 12 chr2 26652257 26652426 -226604157 - MIR3 SINE MIR -3 205 37 2278 68 3 0 chr2 26652436 26652728 -226603855 - AluY SINE Alu -18 293 1 261 241 60 24 chr2 26652889 26652972 -226603611 + MIR SINE MIR 124 209 -53 256 280 101 42 chr2 26653150 26653339 -226603244 - MER112 DNA MER1_type -1 259 60 1716 161 94 0 chr2 26653442 26653771 -226602812 + MER46B DNA MER2_type 1 235 -1 1867 164 0 13 chr2 26654159 26654471 -226602112 - AluJo SINE Alu -4 308 1 571 158 123 35 chr2 26658093 26658207 -226598376 + FLAM_C SINE Alu 10 133 -10 2171 116 0 0 chr2 26658402 26658703 -226597880 - AluSx SINE Alu -9 303 3 418 306 27 27 chr2 26658818 26659004 -226597579 + L1MEc LINE L1 318 503 -5893 * 495 272 26 5 chr2 26658986 26659177 -226597406 + L1MEc LINE L1 820 1014 -5382 479 143 88 11 chr2 26659187 26659278 -226597305 + FLAM_A SINE Alu 29 126 -16 1956 251 84 46 chr2 26659285 26659703 -226596880 + L1MEc LINE L1 1068 1468 -4928 1766 160 13 32 chr2 26659703 26660015 -226596568 + AluJo SINE Alu 1 306 -6 1956 251 84 46 chr2 26660015 26660112 -226596471 + L1MEc LINE L1 1468 1560 -4836 1859 141 37 0 chr2 26660112 26660410 -226596173 + AluSq SINE Alu 1 309 -4 1956 251 84 46 chr2 26660410 26660811 -226595772 + L1MEc LINE L1 1560 1944 -4452 2149 119 7 0 chr2 26660811 26661121 -226595462 + AluSx SINE Alu 1 312 0 1956 251 84 46 chr2 26661121 26661224 -226595359 + L1MEc LINE L1 1944 2042 -4354 2045 105 7 0 chr2 26661224 26661510 -226595073 - AluY SINE Alu -23 288 1 1956 251 84 46 chr2 26661510 26661576 -226595007 + L1MEc LINE L1 2042 2198 -4198 9122 191 46 11 chr2 26661578 26664072 -226592511 + ERVL-C1 LTR ERVL 1337 3972 -1792 2277 122 31 36 chr2 26664072 26664464 -226592119 + MLT1B LTR MaLR 1 390 0 9122 191 46 11 chr2 26664464 26664728 -226591855 + ERVL-C1 LTR ERVL 3972 4225 -1539 4410 195 32 20 chr2 26664746 26665597 -226590986 + ERVL-C1 LTR ERVL 4461 5321 -443 2192 194 92 49 chr2 26665603 26665824 -226590759 + MER76 LTR ERV 103 313 -375 2203 114 0 0 chr2 26665824 26666130 -226590453 - AluSx SINE Alu -6 306 1 2192 194 92 49 chr2 26666130 26666460 -226590123 + MER76 LTR ERV 313 678 -10 1476 181 135 3 chr2 26666498 26666846 -226589737 + ERVL-C1 LTR ERVL 5362 5755 -9 493 178 69 0 chr2 26666862 26666963 -226589620 + MLT2C1 LTR ERVL 17 124 -273 795 255 76 19 chr2 26666972 26667286 -226589297 + L1MEc LINE L1 3352 3683 -2532 457 113 0 36 chr2 26667286 26667507 -226589076 + AluSc SINE Alu 1 305 -4 4676 233 86 12 chr2 26667509 26668887 -226587696 + L1MEc LINE L1 3691 5192 -1023 1574 189 107 42 chr2 26668855 26669313 -226587270 + L1ME1 LINE L1 5023 5538 -697 * 2081 128 0 0 chr2 26669313 26669618 -226586965 + AluSx SINE Alu 1 305 -7 1574 189 107 42 chr2 26669618 26669777 -226586806 + L1ME1 LINE L1 5538 5685 -550 580 179 0 68 chr2 26669781 26669898 -226586685 + FLAM_A SINE Alu 11 119 -23 1147 171 9 23 chr2 26669898 26670115 -226586468 - AluJo SINE Alu -11 301 88 1410 198 24 49 chr2 26670123 26670219 -226586364 + L1ME1 LINE L1 5653 5750 -485 2153 115 0 0 chr2 26670219 26670514 -226586069 - AluSx SINE Alu -17 295 1 1410 198 24 49 chr2 26670514 26670746 -226585837 + L1ME1 LINE L1 5750 5973 -262 1476 179 13 47 chr2 26670762 26671063 -226585520 - AluJo SINE Alu -21 291 1 286 188 75 25 chr2 26671063 26671143 -226585440 + L1ME1 LINE L1 6121 6204 -31 1294 228 11 4 chr2 26671143 26671415 -226585168 + AluJo SINE Alu 3 276 -36 234 0 0 0 chr2 26671432 26671458 -226585125 + (CA)n Simple_repeat Simple_repeat 1 26 0 1916 121 17 7 chr2 26671916 26672206 -226584377 - AluSx SINE Alu -19 293 1 1995 124 11 7 chr2 26672721 26673004 -226583579 + AluSq SINE Alu 1 304 0 181 0 0 0 chr2 26673004 26673024 -226583559 + (TAAAA)n Simple_repeat Simple_repeat 2 180 0 3243 176 48 59 chr2 26673826 26674570 -226582013 - L1MB5 LINE L1 -76 6098 5363 443 143 199 93 chr2 26674601 26674762 -226581821 - AluSp SINE Alu -21 292 115 252 111 0 0 chr2 26675007 26675052 -226581531 + (TG)n Simple_repeat Simple_repeat 1 45 0 261 230 96 111 chr2 26675299 26675434 -226581149 - MIR3 SINE MIR -44 164 32 202 277 24 60 chr2 26675803 26675886 -226580697 + L3 LINE CR1 1429 1508 -69 405 188 141 74 chr2 26675981 26676081 -226580502 - MER58C DNA MER1_type -2205 215 100 2299 77 16 19 chr2 26676081 26676392 -226580191 - AluSq SINE Alu -3 310 1 405 188 141 74 chr2 26676392 26676440 -226580143 - MER58C DNA MER1_type -2320 100 57 186 167 0 0 chr2 26676681 26676717 -226579866 + (TG)n Simple_repeat Simple_repeat 2 37 0 323 227 182 0 chr2 26676735 26676823 -226579760 - MIR SINE MIR -153 109 6 183 139 0 0 chr2 26676967 26677003 -226579580 + (CCCTA)n Simple_repeat Simple_repeat 2 37 0 440 216 85 51 chr2 26677125 26677301 -226579282 - L1ME4a LINE L1 -1 6120 5939 1851 175 15 18 chr2 26677314 26677657 -226578926 - MER2 DNA MER2_type 0 344 3 616 246 18 61 chr2 26677900 26678128 -226578455 - L1MC4a LINE L1 -1903 5905 5688 415 82 0 0 chr2 26678132 26678193 -226578390 - Alu SINE Alu -13 298 238 271 310 61 41 chr2 26678255 26678500 -226578083 - L1MC4a LINE L1 -449 5672 5423 180 0 0 0 chr2 26678502 26678522 -226578061 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2491 84 0 0 chr2 26678525 26678824 -226577759 + AluSc SINE Alu 1 299 -10 2318 157 66 23 chr2 26678824 26679265 -226577318 + L1MB2 LINE L1 5665 6124 -47 596 114 0 0 chr2 26679269 26679348 -226577235 + AluJ/FLAM SINE Alu 13 91 -221 839 146 26 1 chr2 26679349 26679501 -226577082 - L1MB2 LINE L1 -252 5911 5753 383 221 29 39 chr2 26679655 26679759 -226576824 - L2 LINE L2 -1 3312 3210 630 168 35 0 chr2 26679957 26680070 -226576513 - AluSg/x SINE Alu -5 307 191 227 161 0 36 chr2 26680070 26680126 -226576457 + T-rich Low_complexity Low_complexity 3 56 0 1751 131 94 0 chr2 26680149 26680424 -226576159 + AluJb SINE Alu 3 303 -9 351 0 0 0 chr2 26680469 26680508 -226576075 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 183 32 86 chr2 26680514 26680607 -226575976 + L1MA9 LINE L1 6183 6270 -42 3922 98 36 23 chr2 26680709 26681206 -226575377 + LTR38B LTR ERV1 1 509 -101 2126 93 10 7 chr2 26681206 26681495 -226575088 - AluSx SINE Alu -22 290 1 3922 98 36 23 chr2 26681495 26681599 -226574984 + LTR38B LTR ERV1 509 610 0 3217 124 23 2 chr2 26681661 26682138 -226574445 + LTR15 LTR ERV1 1 487 -6 7672 146 60 35 chr2 26682144 26683773 -226572810 + HERV15 LTR ERV1 1 1387 -7039 4019 259 22 28 chr2 26683762 26684795 -226571788 + HERV15 LTR ERV1 1701 2727 -5699 * 1761 275 98 20 chr2 26684976 26685752 -226570831 - HERV16 LTR ERVL -2759 2237 1598 323 325 0 0 chr2 26685818 26685895 -226570688 - L2 LINE L2 -58 3214 3138 2200 112 7 3 chr2 26686144 26686449 -226570134 - AluSx SINE Alu -6 306 1 1300 241 145 10 chr2 26686462 26686861 -226569722 - MER97a DNA MER1_type? -438 456 4 2185 106 0 10 chr2 26686916 26687218 -226569365 + AluSx SINE Alu 1 299 -13 361 77 0 0 chr2 26687305 26687357 -226569226 - AluSp SINE Alu 0 302 251 1842 119 15 0 chr2 26687463 26687724 -226568859 - AluSp SINE Alu -48 265 1 242 262 48 0 chr2 26687727 26687853 -226568730 - L1P LINE L1 -846 5300 5169 1482 141 109 62 chr2 26687972 26688248 -226568335 + AluJo SINE Alu 1 289 -23 332 324 33 52 chr2 26688276 26688606 -226567977 - L1M4 LINE L1 -1085 5061 4738 2124 127 3 3 chr2 26688607 26688907 -226567676 - AluJo SINE Alu -12 300 1 1958 226 94 8 chr2 26689263 26689753 -226566830 - MLT1F LTR MaLR -8 534 3 1711 256 106 16 chr2 26689901 26690589 -226565994 - L1MC4a LINE L1 -101 6020 5270 414 268 45 57 chr2 26690744 26690901 -226565682 - L1MC4 LINE L1 -143 7899 7745 659 225 62 77 chr2 26690940 26690990 -226565593 + MIR SINE MIR 20 69 -193 2111 99 7 3 chr2 26690990 26691323 -226565260 + AluSq SINE Alu 1 334 0 659 225 62 77 chr2 26691323 26691480 -226565103 + MIR SINE MIR 69 225 -37 24 0 0 0 chr2 26691742 26691766 -226564817 + AT_rich Low_complexity Low_complexity 1 24 0 2355 106 3 0 chr2 26692636 26692947 -226563636 + AluSx SINE Alu 1 312 0 354 240 29 19 chr2 26692964 26693085 -226563498 + MIR SINE MIR 33 154 -64 187 276 195 23 chr2 26693477 26693564 -226563019 + L2 LINE L2 3139 3240 -32 180 0 0 0 chr2 26693946 26693966 -226562617 + (TA)n Simple_repeat Simple_repeat 1 20 0 212 292 56 11 chr2 26694064 26694153 -226562430 - MIR3 SINE MIR -4 204 112 3159 138 0 24 chr2 26694356 26694529 -226562054 - HERVK22 LTR ERVK -6026 811 635 2519 84 0 0 chr2 26694529 26694838 -226561745 - AluY SINE Alu -2 309 1 3159 138 0 24 chr2 26694838 26695156 -226561427 - HERVK22 LTR ERVK -6202 635 332 1037 77 0 8 chr2 26695156 26695286 -226561297 + AluY SINE Alu 1 129 -182 585 162 29 0 chr2 26695386 26695491 -226561092 - AluJb SINE Alu -203 109 2 824 278 28 24 chr2 26695502 26695793 -226560790 + HAL1 LINE L1 2 293 -2214 879 253 106 76 chr2 26695819 26696509 -226560074 + MER49 LTR ERV1 15 923 0 1004 263 50 66 chr2 26696601 26696866 -226559717 + HAL1 LINE L1 435 695 -1812 2167 93 11 0 chr2 26696866 26697168 -226559415 + AluSx SINE Alu 3 307 0 1004 263 50 66 chr2 26697168 26697282 -226559301 + HAL1 LINE L1 695 809 -1698 1854 165 7 7 chr2 26697294 26697603 -226558980 - AluJo SINE Alu -3 309 1 1772 176 106 131 chr2 26698188 26698618 -226557965 + HAL1 LINE L1 805 1244 -1263 2374 91 0 0 chr2 26698618 26698944 -226557639 - AluSq SINE Alu 0 326 1 1772 176 106 131 chr2 26698944 26699184 -226557399 + HAL1 LINE L1 1244 1455 -1052 309 26 0 0 chr2 26699184 26699222 -226557361 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1772 176 106 131 chr2 26699222 26699381 -226557202 + HAL1 LINE L1 1455 1616 -891 1405 162 62 26 chr2 26699580 26699889 -226556694 - MER33 DNA MER1_type -4 320 1 1516 121 0 0 chr2 26699976 26700182 -226556401 + AluSc SINE Alu 88 293 -16 954 97 0 0 chr2 26700636 26700770 -226555813 + AluSp/q SINE Alu 179 312 -1 2518 55 0 16 chr2 26701144 26701454 -226555129 - AluY SINE Alu -6 305 1 1014 300 88 16 chr2 26701478 26702095 -226554488 - L1MC4a LINE L1 -1893 5915 5255 762 170 0 43 chr2 26702288 26702429 -226554154 - AluJo SINE Alu -176 136 2 276 30 0 0 chr2 26702488 26702521 -226554062 + (TTA)n Simple_repeat Simple_repeat 2 34 0 695 178 0 8 chr2 26702530 26702648 -226553935 - FLAM_C SINE Alu -25 118 2 2132 114 3 13 chr2 26704022 26704328 -226552255 + AluSx SINE Alu 1 303 -9 480 103 0 0 chr2 26704616 26704684 -226551899 - AluSc SINE Alu -8 301 234 1001 79 0 8 chr2 26704684 26704810 -226551773 - AluSc SINE Alu -184 125 1 1714 228 34 55 chr2 26704834 26705155 -226551428 - L1MC4a LINE L1 -1037 5109 4783 2748 119 41 2 chr2 26705155 26705566 -226551017 - MSTA LTR MaLR 0 428 2 1714 228 34 55 chr2 26705566 26705695 -226550888 - L1MC4a LINE L1 -1363 4783 4671 2088 145 7 0 chr2 26705695 26705999 -226550584 - AluSx SINE Alu -6 306 1 1714 228 34 55 chr2 26705999 26706112 -226550471 - L1MC4a LINE L1 -1475 4671 4557 438 250 17 0 chr2 26706158 26706278 -226550305 - L1MC4a LINE L1 -1792 4354 4233 842 229 79 12 chr2 26706427 26706669 -226549914 + MIR SINE MIR 3 262 0 29 0 0 0 chr2 26707522 26707551 -226549032 + AT_rich Low_complexity Low_complexity 1 29 0 503 269 98 57 chr2 26707781 26707950 -226548633 - Charlie8 DNA MER1_type -65 276 91 2351 91 0 3 chr2 26707950 26708248 -226548335 - AluSg SINE Alu -13 297 1 503 269 98 57 chr2 26708248 26708342 -226548241 - Charlie8 DNA MER1_type -250 91 2 251 335 92 10 chr2 26708342 26708548 -226548035 + L2 LINE L2 2535 2757 -557 1813 170 10 0 chr2 26708596 26708890 -226547693 - AluJb SINE Alu -15 297 1 617 214 312 0 chr2 26709239 26709393 -226547190 + Tigger5 DNA MER2_type 11 212 -2111 2249 116 0 0 chr2 26709393 26709686 -226546897 + AluSx SINE Alu 1 293 -19 1853 96 49 146 chr2 26709686 26709876 -226546707 - HERVK22 LTR ERVK -6489 348 212 4894 117 32 38 chr2 26709876 26710661 -226545922 - LTR17 LTR ERV1 0 780 1 1853 96 49 146 chr2 26710661 26710855 -226545728 - HERVK22 LTR ERVK -6625 212 1 3312 93 18 7 chr2 26710856 26711309 -226545274 - LTR22A LTR ERVK 0 458 1 2264 117 3 0 chr2 26711729 26712038 -226544545 - AluSx SINE Alu -2 310 1 188 329 0 0 chr2 26713077 26713150 -226543433 + L2 LINE L2 2284 2356 -958 2107 136 0 0 chr2 26713150 26713444 -226543139 + AluSx SINE Alu 1 294 -18 227 311 0 0 chr2 26713946 26714020 -226542563 + L1MC/D LINE L1 5812 5885 -1923 21 0 0 0 chr2 26714571 26714592 -226541991 + AT_rich Low_complexity Low_complexity 1 21 0 2424 95 3 0 chr2 26714674 26714978 -226541605 + AluSx SINE Alu 1 305 -7 345 215 20 114 chr2 26715821 26715923 -226540660 + L1MD3 LINE L1 5794 5879 -1929 2165 134 0 16 chr2 26715923 26716230 -226540353 + AluJb SINE Alu 1 302 -10 345 215 20 114 chr2 26716230 26716276 -226540307 + L1MD3 LINE L1 5879 5928 -1880 1782 154 74 0 chr2 26716385 26716670 -226539913 + AluSx SINE Alu 1 306 -6 2162 134 0 0 chr2 26716970 26717280 -226539303 + AluSx SINE Alu 1 310 0 1316 130 0 211 chr2 26717575 26717944 -226538639 + AluJo SINE Alu 1 291 -21 1953 128 34 7 chr2 26718254 26718551 -226538032 + AluSx SINE Alu 1 305 -7 3389 156 180 137 chr2 26718859 26719180 -226537403 + L1MD3 LINE L1 6736 7042 -953 2111 94 0 0 chr2 26719180 26719446 -226537137 + AluSx SINE Alu 35 300 -12 3389 156 180 137 chr2 26719446 26719523 -226537060 + L1MD3 LINE L1 7042 7114 -881 1706 173 10 23 chr2 26719523 26719830 -226536753 + AluJo SINE Alu 10 312 0 3389 156 180 137 chr2 26719830 26719961 -226536622 + L1MD3 LINE L1 7114 7238 -757 526 239 26 8 chr2 26719961 26720078 -226536505 + MLT1F1 LTR MaLR 1 119 -448 3389 156 180 137 chr2 26720078 26720521 -226536062 + L1MD3 LINE L1 7238 7660 -335 2404 90 0 7 chr2 26720521 26720822 -226535761 + AluSq SINE Alu 1 299 -14 3389 156 180 137 chr2 26720822 26720879 -226535704 + L1MD3 LINE L1 7660 7713 -282 1544 184 25 22 chr2 26720879 26721157 -226535426 - AluJo SINE Alu -33 279 1 3389 156 180 137 chr2 26721157 26721214 -226535369 + L1MD3 LINE L1 7713 7994 -1 27 29 0 0 chr2 26721250 26721284 -226535299 + AT_rich Low_complexity Low_complexity 1 34 0 2376 46 0 55 chr2 26722535 26722842 -226533741 - AluY SINE Alu -12 299 10 203 179 0 0 chr2 26722994 26723033 -226533550 + A-rich Low_complexity Low_complexity 1 39 0 1418 124 9 5 chr2 26723071 26723288 -226533295 + HERV15 LTR ERV1 3160 3377 -5358 21412 106 10 8 chr2 26723288 26726268 -226530315 + HERV15 LTR ERV1 3776 6762 -1973 8240 83 6 18 chr2 26726261 26727364 -226529219 + HERV15 LTR ERV1 6982 8071 -664 * 2794 115 8 0 chr2 26727344 26727734 -226528849 + HERV15 LTR ERV1 8343 8735 0 * 3075 122 25 21 chr2 26727734 26728219 -226528364 + LTR15 LTR ERV1 1 487 -6 266 324 0 0 chr2 26728223 26728325 -226528258 - L1MC/D LINE L1 -1939 5869 5768 1618 152 32 26 chr2 26728411 26728721 -226527862 - AluJb SINE Alu 0 312 1 2164 112 0 0 chr2 26728901 26729206 -226527377 - AluSx SINE Alu -5 307 3 2351 82 0 0 chr2 26729528 26729834 -226526749 + AluY SINE Alu 3 308 -3 45 45 0 0 chr2 26730218 26730284 -226526299 + AT_rich Low_complexity Low_complexity 1 66 0 521 329 0 22 chr2 26732293 26732430 -226524153 - MIR3 SINE MIR -64 144 11 190 271 169 0 chr2 26735943 26736002 -226520581 + MIR SINE MIR 124 192 -70 1063 192 195 3 chr2 26736811 26737098 -226519485 - Charlie1b DNA MER1_type -181 342 1 363 322 7 20 chr2 26737178 26737324 -226519259 + GA-rich Low_complexity Low_complexity 1 144 0 773 163 8 0 chr2 26740126 26740249 -226516334 + FLAM_A SINE Alu 1 124 -9 804 160 23 6 chr2 26741328 26741503 -226515080 + CT-rich Low_complexity Low_complexity 2 179 0 843 221 0 12 chr2 26741530 26741702 -226514881 - FAM SINE Alu -10 175 6 311 210 80 105 chr2 26741961 26742028 -226514555 + L1MC4a LINE L1 5312 5379 -2429 2105 118 3 0 chr2 26742028 26742333 -226514250 + AluSq SINE Alu 1 306 -7 311 210 80 105 chr2 26742333 26742427 -226514156 + L1MC4a LINE L1 5379 5469 -2339 378 293 89 19 chr2 26742453 26742723 -226513860 + L1MC4a LINE L1 5649 5937 -1871 2151 88 14 7 chr2 26743503 26743799 -226512784 + AluSx SINE Alu 1 298 -14 2173 99 3 16 chr2 26743812 26744126 -226512457 + AluSg SINE Alu 1 310 0 221 211 105 40 chr2 26744453 26744529 -226512054 + L2 LINE L2 3192 3272 0 2124 87 0 27 chr2 26744662 26744961 -226511622 + AluSx SINE Alu 1 291 -21 671 206 0 22 chr2 26745281 26745417 -226511166 - FLAM_A SINE Alu 0 133 1 1919 147 3 0 chr2 26745442 26745741 -226510842 - AluSx SINE Alu -12 300 1 1672 151 25 54 chr2 26745774 26746091 -226510492 + AluJb SINE Alu 3 310 -2 5193 66 38 0 chr2 26746153 26746834 -226509749 - L1PA13 LINE L1 -2 6161 5455 1989 129 10 0 chr2 26748585 26748880 -226507703 - AluSx SINE Alu -14 298 1 1022 160 20 60 chr2 26749312 26749512 -226507071 - MSTD LTR MaLR -1 395 204 189 121 0 0 chr2 26749530 26749563 -226507020 + (GA)n Simple_repeat Simple_repeat 1 33 0 366 142 28 123 chr2 26749601 26749707 -226506876 + MSTD LTR MaLR 299 394 -2 * 796 116 0 0 chr2 26749707 26749815 -226506768 - MSTD LTR MaLR -288 108 1 301 306 47 0 chr2 26749848 26749933 -226506650 + MIR3 SINE MIR 73 161 -47 2463 215 89 19 chr2 26749934 26750258 -226506325 - L1MDb LINE L1 -4676 1864 1564 2110 99 7 3 chr2 26750258 26750562 -226506021 - AluY SINE Alu -6 305 1 2463 215 89 19 chr2 26750562 26750712 -226505871 - L1MDb LINE L1 -4976 1564 1426 1910 232 8 37 chr2 26750712 26750958 -226505625 + MLT1D LTR MaLR 4 229 -276 1794 134 25 14 chr2 26750958 26751241 -226505342 - AluJb SINE Alu -24 288 3 1910 232 8 37 chr2 26751241 26751511 -226505072 + MLT1D LTR MaLR 229 505 0 2463 215 89 19 chr2 26751511 26751997 -226504586 - L1MDb LINE L1 -5114 1426 907 423 360 88 32 chr2 26752485 26752793 -226503790 - L1MDb LINE L1 -6193 347 23 838 227 56 7 chr2 26752797 26753083 -226503500 - L1MEc LINE L1 -3166 3049 2750 2042 108 20 0 chr2 26753083 26753379 -226503204 + AluSx SINE Alu 1 302 -10 834 210 19 0 chr2 26753394 26753556 -226503027 + FRAM SINE Alu 1 165 -1 350 277 65 48 chr2 26753603 26753913 -226502670 - L1MEc LINE L1 -4052 2344 2030 1886 149 0 0 chr2 26754268 26754556 -226502027 + AluJb SINE Alu 1 288 -24 805 138 0 0 chr2 26754591 26754714 -226501869 - FLAM_C SINE Alu -7 136 14 219 387 21 0 chr2 26754960 26755053 -226501530 + L2 LINE L2 240 334 -2980 495 271 75 8 chr2 26755236 26755369 -226501214 - MER21B LTR ERV1 -654 209 68 1819 111 59 21 chr2 26755630 26755919 -226500664 - AluSx SINE Alu -8 304 5 723 212 0 0 chr2 26755984 26756116 -226500467 + FLAM_A SINE Alu 1 132 -1 2868 151 99 16 chr2 26756869 26757474 -226499109 - L1MB7 LINE L1 -41 6143 5476 377 335 79 60 chr2 26757773 26758039 -226498544 - L2 LINE L2 -16 3256 2986 429 103 0 0 chr2 26758126 26758194 -226498389 + (TG)n Simple_repeat Simple_repeat 2 69 0 2152 117 10 0 chr2 26758254 26758563 -226498020 + AluSx SINE Alu 1 312 0 651 281 45 27 chr2 26758921 26759142 -226497441 + MLT1H LTR MaLR 2 226 -323 787 138 8 0 chr2 26759146 26759276 -226497307 - L1MA9 LINE L1 0 6312 6182 596 222 24 8 chr2 26759276 26759402 -226497181 + MLT1H LTR MaLR 416 543 -6 2005 122 0 3 chr2 26759551 26759873 -226496710 + AluSx SINE Alu 1 321 0 818 182 8 0 chr2 26760043 26760175 -226496408 + FLAM_A SINE Alu 1 133 0 201 147 0 0 chr2 26760511 26760545 -226496038 + (T)n Simple_repeat Simple_repeat 1 34 0 1521 135 11 22 chr2 26760688 26760962 -226495621 - AluJo SINE Alu -30 282 12 1425 137 17 99 chr2 26760998 26761051 -226495532 + MER58B DNA MER1_type 74 130 -2290 1666 180 41 3 chr2 26761051 26761367 -226495216 + L1MC1 LINE L1 6000 6327 -6 1425 137 17 99 chr2 26761367 26761605 -226494978 + MER58B DNA MER1_type 130 341 0 1249 272 65 7 chr2 26761639 26762049 -226494534 + HERV16 LTR ERVL 2755 3090 -1906 817 144 12 24 chr2 26762051 26762218 -226494365 - AluJo SINE Alu -147 165 1 22 0 0 0 chr2 26762315 26762337 -226494246 + GC_rich Low_complexity Low_complexity 1 22 0 245 196 54 0 chr2 26762858 26762914 -226493669 - L2 LINE L2 0 3313 3255 1973 118 3 7 chr2 26763109 26763397 -226493186 + AluSx SINE Alu 3 289 -23 297 241 139 9 chr2 26763469 26763577 -226493006 + MIR SINE MIR 23 144 -64 1282 146 105 34 chr2 26764128 26764423 -226492160 + LTR52 LTR ERVL 5 320 -101 1422 128 124 0 chr2 26764517 26764767 -226491816 + L1MA5A LINE L1 5997 6277 -20 2072 131 0 10 chr2 26764767 26765080 -226491503 - AluSx SINE Alu -2 310 1 23 33 0 0 chr2 26765085 26765115 -226491468 + AT_rich Low_complexity Low_complexity 1 30 0 349 336 9 0 chr2 26765457 26765564 -226491019 + L2 LINE L2 3201 3308 -5 226 268 62 18 chr2 26765574 26765686 -226490897 + L1ME4a LINE L1 5685 5801 -361 239 193 136 23 chr2 26765776 26765864 -226490719 + L1ME4a LINE L1 5944 6041 -80 2151 90 37 0 chr2 26766131 26766430 -226490153 + AluSg SINE Alu 1 310 0 403 254 90 30 chr2 26767162 26767296 -226489287 - MIR SINE MIR -21 241 100 2153 98 7 7 chr2 26767732 26768039 -226488544 - AluSg SINE Alu -3 307 1 212 253 13 27 chr2 26769268 26769346 -226487237 + (TA)n Simple_repeat Simple_repeat 1 76 0 1815 141 0 7 chr2 26770056 26770346 -226486237 - AluSx SINE Alu -4 308 21 23 68 0 0 chr2 26770524 26770568 -226486015 + AT_rich Low_complexity Low_complexity 1 44 0 227 222 0 0 chr2 26776110 26776164 -226480419 + L1ME4a LINE L1 6067 6120 -1 297 219 73 110 chr2 26776635 26776753 -226479830 + L1ME LINE L1 5590 5702 -419 2049 146 0 16 chr2 26776753 26777068 -226479515 - AluJb SINE Alu -2 310 1 297 219 73 110 chr2 26777068 26777113 -226479470 + L1ME LINE L1 5702 5747 -374 303 343 76 0 chr2 26778333 26778438 -226478145 + L3 LINE CR1 1459 1571 -6 330 319 88 42 chr2 26779608 26779799 -226476784 - MIR SINE MIR -63 145 2 185 342 99 33 chr2 26780047 26780199 -226476384 + MIR3 SINE MIR 44 205 -3 2353 73 10 0 chr2 26780591 26780880 -226475703 - AluSg SINE Alu -18 292 1 645 321 55 9 chr2 26781346 26781564 -226475019 + MIR SINE MIR 2 229 -33 734 198 24 0 chr2 26781639 26781765 -226474818 - FLAM_A SINE Alu -3 130 2 355 252 84 23 chr2 26782286 26782417 -226474166 + MIR3 SINE MIR 68 206 -2 201 357 14 0 chr2 26782445 26782515 -226474068 + L2 LINE L2 2260 2330 -984 279 0 0 0 chr2 26783247 26783278 -226473305 + (A)n Simple_repeat Simple_repeat 1 31 0 2365 269 106 46 chr2 26783462 26784768 -226471815 + L1MC4a LINE L1 5255 6638 -1170 22 0 0 0 chr2 26784852 26784874 -226471709 + AT_rich Low_complexity Low_complexity 1 22 0 533 215 30 106 chr2 26784990 26785207 -226471376 + L1MC5 LINE L1 7304 7499 -462 1845 126 54 0 chr2 26785207 26785484 -226471099 - AluSq SINE Alu -21 292 1 533 215 30 106 chr2 26785484 26785531 -226471052 + L1MC5 LINE L1 7499 7548 -413 557 179 27 0 chr2 26785558 26785670 -226470913 + L1MC5 LINE L1 7680 7794 -167 354 298 21 28 chr2 26785699 26785840 -226470743 + L1ME LINE L1 41 180 -5890 304 302 33 61 chr2 26785877 26786089 -226470494 + L1ME LINE L1 258 463 -5607 1819 237 90 78 chr2 26786215 26786833 -226469750 + L1ME LINE L1 271 880 -5202 2064 133 0 7 chr2 26786833 26787127 -226469456 - AluJo SINE Alu -18 294 3 1819 237 90 78 chr2 26787127 26787821 -226468762 + L1ME LINE L1 880 1514 -4568 1783 145 64 14 chr2 26788355 26788652 -226467931 - AluJo SINE Alu 0 312 1 2358 86 3 7 chr2 26789607 26789910 -226466673 + AluSp SINE Alu 1 302 -11 355 246 78 21 chr2 26790284 26790426 -226466157 + L1MC5 LINE L1 7637 7786 -175 1302 138 6 0 chr2 26790426 26790607 -226465976 + AluSq SINE Alu 1 182 -131 25 0 0 0 chr2 26790711 26790736 -226465847 + AT_rich Low_complexity Low_complexity 1 25 0 1953 154 3 13 chr2 26791289 26791595 -226464988 + AluJo SINE Alu 3 305 -7 2206 101 10 10 chr2 26792064 26792372 -226464211 + AluSq SINE Alu 1 308 -5 5307 75 21 38 chr2 26792561 26793620 -226462963 + SVA Other Other 3 868 -592 6542 60 24 34 chr2 26793633 26794584 -226461999 + SVA Other Other 433 1374 -12 304 351 89 10 chr2 26794942 26795244 -226461339 - L2 LINE L2 -819 2495 2170 193 200 0 60 chr2 26795445 26795495 -226461088 + L2 LINE L2 3188 3234 -38 943 240 61 8 chr2 26795740 26795986 -226460597 - MER46C DNA MER2_type -10 328 70 594 245 51 38 chr2 26796405 26796646 -226459937 - L2 LINE L2 -34 3279 2944 1171 241 14 0 chr2 26796813 26797033 -226459550 - MER58A DNA MER1_type 0 224 2 362 333 32 0 chr2 26797817 26797910 -226458673 + MIR SINE MIR 19 114 -94 222 62 0 0 chr2 26798107 26798139 -226458444 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2338 105 3 0 chr2 26798353 26798658 -226457925 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 26799632 26799655 -226456928 + AT_rich Low_complexity Low_complexity 1 23 0 880 145 15 0 chr2 26800239 26800370 -226456213 + FLAM_A SINE Alu 1 133 0 1725 126 99 8 chr2 26800410 26800673 -226455910 + AluSx SINE Alu 1 287 -25 799 200 123 0 chr2 26801102 26801272 -226455311 + MIR SINE MIR 71 261 -1 2322 87 23 0 chr2 26801674 26801974 -226454609 - AluSx SINE Alu -5 307 1 1531 52 134 0 chr2 26802141 26802335 -226454248 + AluY SINE Alu 58 277 -34 2129 122 3 13 chr2 26802496 26802799 -226453784 + AluSx SINE Alu 1 300 -12 1121 153 144 4 chr2 26802892 26803118 -226453465 + MER44D DNA MER2_type 1 528 -81 670 164 138 0 chr2 26803118 26803234 -226453349 + MER2 DNA MER2_type 1 132 -213 2410 63 3 0 chr2 26803234 26803519 -226453064 - AluY SINE Alu -25 286 1 695 306 156 42 chr2 26804668 26804796 -226451787 - L3 LINE CR1 -140 1437 1325 2223 118 0 0 chr2 26804796 26805092 -226451491 - AluSx SINE Alu -16 296 1 695 306 156 42 chr2 26805092 26805234 -226451349 - L3 LINE CR1 -252 1325 1201 979 210 93 0 chr2 26805234 26805439 -226451144 - MER58A DNA MER1_type 0 224 1 695 306 156 42 chr2 26805439 26805880 -226450703 - L3 LINE CR1 -376 1201 644 613 133 0 51 chr2 26805930 26806028 -226450555 + AluJ/FLAM SINE Alu 3 95 -217 1972 96 62 7 chr2 26806037 26806328 -226450255 - AluSx SINE Alu -1 311 5 1932 137 40 28 chr2 26806330 26806652 -226449931 - THE1B LTR MaLR -38 326 1 820 261 70 21 chr2 26806748 26807032 -226449551 + MLT1C LTR MaLR 168 465 -2 285 299 84 9 chr2 26807051 26807158 -226449425 - L2 LINE L2 -208 3105 2991 849 191 111 36 chr2 26807216 26807441 -226449142 + L1ME3 LINE L1 5913 6154 -8 325 322 256 22 chr2 26807520 26807883 -226448700 - L2 LINE L2 -341 2973 2526 988 178 6 12 chr2 26808126 26808289 -226448294 + FRAM SINE Alu 1 158 -18 1733 170 3 7 chr2 26808412 26808706 -226447877 + AluJb SINE Alu 3 295 -17 574 204 154 43 chr2 26809306 26809468 -226447115 - MIR SINE MIR -13 249 70 2306 85 0 16 chr2 26809762 26810069 -226446514 + AluY SINE Alu 2 303 -8 1483 169 48 45 chr2 26810306 26810596 -226445987 - AluJo SINE Alu -19 293 3 2418 71 3 0 chr2 26810818 26811115 -226445468 + AluSq SINE Alu 1 298 -15 2225 83 27 7 chr2 26811120 26811421 -226445162 + AluSp SINE Alu 7 313 0 300 272 31 93 chr2 26811645 26811807 -226444776 - L2 LINE L2 -2 3311 3160 194 331 88 37 chr2 26812735 26812871 -226443712 + L3b LINE CR1 1302 1444 -139 287 232 0 0 chr2 26813027 26813083 -226443500 - L2 LINE L2 0 3272 3217 222 294 59 0 chr2 26813206 26813274 -226443309 - L2 LINE L2 -261 3052 2981 191 291 202 38 chr2 26813372 26813585 -226442998 - MIR SINE MIR -2 260 13 185 202 294 28 chr2 26815190 26815299 -226441284 - MIR SINE MIR -14 248 111 231 286 0 0 chr2 26815436 26815492 -226441091 - L2 LINE L2 -1 3312 3257 978 133 42 18 chr2 26815593 26815758 -226440825 - AluJb SINE Alu -29 283 115 2052 140 3 0 chr2 26815977 26816277 -226440306 + AluSx SINE Alu 1 301 -11 247 272 78 29 chr2 26816596 26816678 -226439905 + MIR3 SINE MIR 66 155 -53 2552 49 0 13 chr2 26816678 26816983 -226439600 + AluY SINE Alu 1 301 -10 247 272 78 29 chr2 26816983 26817003 -226439580 + MIR3 SINE MIR 155 173 -35 1597 154 60 0 chr2 26817180 26817447 -226439136 + Tigger3(Golem) DNA MER2_type 2 284 -2745 226 167 28 0 chr2 26817446 26817482 -226439101 + Tigger3(Golem) DNA MER2_type 3002 3038 0 * 24 0 0 0 chr2 26817848 26817872 -226438711 + AT_rich Low_complexity Low_complexity 1 24 0 2488 58 0 0 chr2 26818338 26818629 -226437954 - AluY SINE Alu -20 291 1 673 157 0 9 chr2 26818649 26818757 -226437826 + FLAM_C SINE Alu 27 133 -10 2192 108 3 0 chr2 26819029 26819324 -226437259 - AluSx SINE Alu -16 296 1 3554 128 39 7 chr2 26820313 26820884 -226435699 - LTR38B LTR ERV1 0 610 22 183 42 0 0 chr2 26820888 26820912 -226435671 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 573 143 0 22 chr2 26820914 26821005 -226435578 - FRAM SINE Alu -19 157 69 881 200 47 147 chr2 26821081 26821219 -226435364 - L1MC4 LINE L1 -881 6927 6777 339 221 0 12 chr2 26821219 26821305 -226435278 - L1MA10 LINE L1 -15 6319 6235 881 200 47 147 chr2 26821305 26821328 -226435255 - L1MC4 LINE L1 -1031 6777 6753 2228 114 0 10 chr2 26821328 26821636 -226434947 - AluSq SINE Alu -8 305 1 881 200 47 147 chr2 26821636 26821789 -226434794 - L1MC4 LINE L1 -1055 6753 6701 1837 161 3 20 chr2 26821789 26822094 -226434489 + AluSx SINE Alu 1 300 -12 881 200 47 147 chr2 26822094 26822245 -226434338 - L1MC4 LINE L1 -1107 6701 6536 182 33 67 0 chr2 26823862 26823892 -226432691 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr2 26825039 26825071 -226431512 + AT_rich Low_complexity Low_complexity 1 32 0 1970 148 10 0 chr2 26826222 26826519 -226430064 - AluJo SINE Alu -8 304 5 814 112 0 17 chr2 26828520 26828636 -226427947 + FLAM_C SINE Alu 26 139 -4 335 301 68 90 chr2 26829388 26829559 -226427024 - L2 LINE L2 -143 3129 2967 2394 68 13 13 chr2 26829559 26829870 -226426713 + AluSp SINE Alu 1 311 -2 335 301 68 90 chr2 26829870 26830020 -226426563 - L2 LINE L2 -305 2967 2815 198 286 36 0 chr2 26830025 26830081 -226426502 - L3 LINE CR1 -179 1398 1341 221 351 40 20 chr2 26830142 26830293 -226426290 - L3 LINE CR1 -330 1247 1094 2169 102 3 43 chr2 26831233 26831555 -226425028 - AluY SINE Alu -2 309 1 2430 82 0 0 chr2 26832231 26832536 -226424047 + AluY SINE Alu 1 305 -6 2230 112 0 13 chr2 26833452 26833755 -226422828 - AluSx SINE Alu -13 299 1 22 70 0 0 chr2 26834116 26834159 -226422424 + AT_rich Low_complexity Low_complexity 1 43 0 2095 141 6 10 chr2 26834713 26835026 -226421557 - AluSx SINE Alu 0 312 1 367 239 90 8 chr2 26835093 26835227 -226421356 - L1ME4a LINE L1 0 6121 5977 2279 100 0 10 chr2 26835484 26835794 -226420789 - AluSx SINE Alu -5 307 1 183 42 0 0 chr2 26835796 26835820 -226420763 + (T)n Simple_repeat Simple_repeat 1 24 0 2244 100 3 0 chr2 26836027 26836317 -226420266 + AluSx SINE Alu 1 291 -21 784 113 81 124 chr2 26836841 26837027 -226419556 - MER20 DNA MER1_type 0 219 42 1652 186 16 16 chr2 26837090 26837402 -226419181 + AluJb SINE Alu 1 312 0 2050 135 3 0 chr2 26837533 26837829 -226418754 + AluJb SINE Alu 2 298 -14 2426 68 10 0 chr2 26838074 26838381 -226418202 + AluY SINE Alu 1 310 -1 498 232 14 56 chr2 26838434 26838576 -226418007 + MIR SINE MIR 4 139 -123 321 208 0 0 chr2 26838711 26838788 -226417795 + (TA)n Simple_repeat Simple_repeat 2 78 0 422 283 151 0 chr2 26838795 26838961 -226417622 - MIR SINE MIR -71 191 1 2299 117 0 0 chr2 26839716 26840025 -226416558 - AluSx SINE Alu -3 309 1 1057 250 133 42 chr2 26840448 26840754 -226415829 + L1ME LINE L1 4974 5251 -919 2372 75 0 7 chr2 26840754 26841049 -226415534 + AluSg SINE Alu 1 293 -17 1057 250 133 42 chr2 26841049 26841285 -226415298 + L1ME LINE L1 5251 5464 -706 2080 65 69 0 chr2 26841285 26841560 -226415023 + AluY SINE Alu 1 294 -17 1057 250 133 42 chr2 26841560 26841706 -226414877 + L1ME LINE L1 5464 5723 -447 255 140 0 40 chr2 26841810 26841860 -226414723 + L1MD3 LINE L1 7063 7110 -885 446 152 33 43 chr2 26841867 26841959 -226414624 + MLT1F1 LTR MaLR 35 125 -442 2211 157 47 15 chr2 26841959 26842368 -226414215 + L1MD3 LINE L1 7404 7825 -170 1996 102 0 37 chr2 26842445 26842740 -226413843 - AluSx SINE Alu -28 284 1 1976 124 11 7 chr2 26843255 26843558 -226413025 + AluSq SINE Alu 1 304 0 2236 118 0 7 chr2 26844302 26844607 -226411976 + AluSx SINE Alu 1 303 -9 1016 150 7 0 chr2 26845362 26845515 -226411068 - MER7A DNA MER2_type -1 335 182 1994 136 16 19 chr2 26845517 26845839 -226410744 - MER1B DNA MER1_type 0 339 4 844 181 110 16 chr2 26845841 26846023 -226410560 - MER7A DNA MER2_type -149 197 1 193 354 0 0 chr2 26846033 26846081 -226410502 + L2 LINE L2 3210 3257 -15 2273 107 0 0 chr2 26846419 26846719 -226409864 + AluSq SINE Alu 6 305 -8 1900 55 0 0 chr2 26847178 26847398 -226409185 + AluY SINE Alu 79 298 -13 2193 125 0 0 chr2 26847642 26847947 -226408636 + AluSx SINE Alu 1 305 -7 405 271 59 27 chr2 26848665 26848946 -226407637 - L1ME3 LINE L1 -225 5939 5651 467 122 0 12 chr2 26848955 26849037 -226407546 + (TG)n Simple_repeat Simple_repeat 2 82 0 2119 112 21 0 chr2 26849043 26849330 -226407253 - AluSx SINE Alu -19 293 1 406 224 128 66 chr2 26849857 26849960 -226406623 + L1ME4a LINE L1 5797 5892 -229 1873 161 0 7 chr2 26849960 26850252 -226406331 + AluJb SINE Alu 1 290 -22 406 224 128 66 chr2 26850252 26850452 -226406131 + L1ME4a LINE L1 5892 6119 -2 1803 170 13 10 chr2 26850619 26850919 -226405664 - AluJo SINE Alu -11 301 1 599 222 89 22 chr2 26851956 26852136 -226404447 + MLT1D LTR MaLR 12 203 -302 207 318 45 0 chr2 26852452 26852518 -226404065 + MIR SINE MIR 38 106 -102 21 0 0 0 chr2 26852747 26852768 -226403815 + AT_rich Low_complexity Low_complexity 1 21 0 531 150 15 105 chr2 26852842 26852975 -226403608 - L2 LINE L2 -2 3311 3191 706 144 117 0 chr2 26853271 26853382 -226403201 - FLAM_A SINE Alu -6 127 4 1986 90 6 99 chr2 26853953 26854298 -226402285 + AluSq SINE Alu 1 313 0 1670 141 100 4 chr2 26854535 26854804 -226401779 - AluSx SINE Alu -17 295 1 536 186 219 11 chr2 26855182 26855365 -226401218 - MIR SINE MIR -10 252 32 2385 48 41 0 chr2 26855370 26855665 -226400918 - AluY SINE Alu -4 307 1 352 230 186 0 chr2 26855719 26855832 -226400751 - MIR3 SINE MIR -45 163 30 2082 91 14 11 chr2 26907184 26907469 -226349114 - AluSx SINE Alu -6 306 21 22 56 0 0 chr2 26907573 26907609 -226348974 + AT_rich Low_complexity Low_complexity 1 36 0 372 245 224 21 chr2 26907662 26907805 -226348778 - L1ME3 LINE L1 -459 5662 5491 848 268 45 23 chr2 26908573 26908883 -226347700 - L1MC5 LINE L1 -42 7919 7603 243 266 138 21 chr2 26908951 26909045 -226347538 - L2 LINE L2 0 3272 3168 2217 74 0 3 chr2 26909364 26909649 -226346934 + AluSx SINE Alu 1 284 -28 183 235 0 0 chr2 26910632 26910666 -226345917 + L2 LINE L2 3190 3223 -49 183 225 50 0 chr2 26910651 26910691 -226345892 + L2 LINE L2 3262 3303 -10 714 215 77 5 chr2 26910912 26911107 -226345476 + L1ME2 LINE L1 5956 6164 0 1891 123 7 29 chr2 26911277 26911586 -226344997 + AluSx SINE Alu 1 302 -10 586 252 60 7 chr2 26911668 26911819 -226344764 - MIR SINE MIR -100 162 4 1843 164 57 74 chr2 26915269 26915599 -226340984 + L1MB7 LINE L1 2732 3066 -3118 1843 147 19 13 chr2 26915599 26915669 -226340914 + L1MB7 LINE L1 5854 5922 -262 2107 152 36 0 chr2 26915669 26916005 -226340578 - MER7A DNA MER2_type 0 346 1 1843 147 19 13 chr2 26916005 26916247 -226340336 + L1MB7 LINE L1 5922 6168 -16 1843 164 57 74 chr2 26916247 26916707 -226339876 + L1MB7 LINE L1 3066 3532 -2652 2207 95 0 16 chr2 26916707 26917012 -226339571 - AluSx SINE Alu -12 300 1 1843 164 57 74 chr2 26917012 26918084 -226338499 + L1MB7 LINE L1 3532 4620 -1564 2306 92 0 0 chr2 26918084 26918387 -226338196 - AluSq SINE Alu -10 303 1 1499 146 29 0 chr2 26918391 26918631 -226337952 + Tigger2 DNA MER2_type 2471 2717 -1 1843 164 57 74 chr2 26918631 26919496 -226337087 + L1MB7 LINE L1 4623 6026 -158 2120 112 0 13 chr2 26919496 26919810 -226336773 - AluY SINE Alu -1 310 1 1843 164 57 74 chr2 26919810 26919951 -226336632 + L1MB7 LINE L1 6026 6168 -16 534 152 0 0 chr2 26920054 26920133 -226336450 - AluJ/FLAM SINE Alu -232 80 2 228 152 0 0 chr2 26920254 26920287 -226336296 + MER103 DNA DNA 1 33 -133 245 254 30 0 chr2 26920528 26920595 -226335988 - L3 LINE CR1 -1 1576 1508 369 306 4 66 chr2 26920812 26921054 -226335529 + L2 LINE L2 2817 3043 -229 2171 77 24 7 chr2 26921442 26921740 -226334843 - AluSg SINE Alu -7 303 1 1387 124 0 10 chr2 26923256 26923465 -226333118 - AluJb SINE Alu -45 267 61 2191 82 0 0 chr2 26923624 26923933 -226332650 - AluSg SINE Alu 0 309 1 2117 99 10 10 chr2 26923944 26924256 -226332327 - AluSx SINE Alu 0 312 1 2703 176 36 102 chr2 26924526 26924686 -226331897 + L1MC5 LINE L1 6567 6736 -1225 1579 147 49 3 chr2 26924686 26924971 -226331612 + AluJb SINE Alu 7 304 -8 2703 176 36 102 chr2 26924971 26925108 -226331475 + L1MC5 LINE L1 6736 6880 -1081 1949 113 0 3 chr2 26925108 26925416 -226331167 + AluSc SINE Alu 1 307 0 2703 176 36 102 chr2 26925416 26925970 -226330613 + L1MC5 LINE L1 6880 7376 -585 196 292 15 0 chr2 26926037 26926102 -226330481 + MIR3 SINE MIR 132 197 -11 231 146 0 0 chr2 26927340 26927381 -226329202 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 247 356 129 37 chr2 26928151 26928477 -226328106 - L2 LINE L2 -766 2548 2193 1067 213 77 65 chr2 26928767 26929120 -226327463 + MLT1A1 LTR MaLR 1 357 -8 257 226 0 0 chr2 26929908 26929961 -226326622 + GA-rich Low_complexity Low_complexity 3 55 0 622 280 20 4 chr2 26930006 26930211 -226326372 + L1MC4a LINE L1 5668 5797 -547 273 29 0 0 chr2 26930718 26930752 -226325831 + (CA)n Simple_repeat Simple_repeat 2 35 0 365 266 23 121 chr2 26930927 26931143 -226325440 + L1MC4 LINE L1 1872 6984 -1338 311 352 19 0 chr2 26931050 26931155 -226325428 - L1MC4 LINE L1 -1337 6705 6599 * 550 339 114 28 chr2 26931559 26932143 -226324440 - L2 LINE L2 0 3272 2640 2500 60 3 0 chr2 26934421 26934736 -226321847 - L1PA7 LINE L1 -1 6153 5838 812 178 0 84 chr2 26935221 26935412 -226321171 + AluJb SINE Alu 137 311 -1 1328 307 37 34 chr2 26935430 26935947 -226320636 + L1MC4a LINE L1 5106 5054 -1092 1935 98 0 15 chr2 26935947 26936213 -226320370 - AluSx SINE Alu -13 299 38 1328 307 37 34 chr2 26936213 26936561 -226320022 + L1MC4a LINE L1 5053 5399 -747 231 329 0 0 chr2 26937078 26937157 -226319426 + GA-rich Low_complexity Low_complexity 1 79 0 259 247 32 54 chr2 26937452 26937545 -226319038 - L2 LINE L2 -2 3270 3180 399 298 109 66 chr2 26937633 26938120 -226318463 - L2 LINE L2 -349 2965 2458 221 214 0 0 chr2 26943358 26943400 -226313183 - MIR SINE MIR -115 147 106 425 239 71 0 chr2 26944725 26944838 -226311745 - MER45A DNA AcHobo 0 178 58 282 238 9 29 chr2 26945146 26945251 -226311332 + (TG)n Simple_repeat Simple_repeat 2 104 0 345 196 20 39 chr2 26946248 26946350 -226310233 - MIR3 SINE MIR -24 184 85 344 297 35 34 chr2 26946547 26946707 -226309876 + MIR SINE MIR 16 173 -63 481 183 96 26 chr2 26947371 26947486 -226309097 - MIR3 SINE MIR -75 133 11 428 296 9 0 chr2 26948271 26948379 -226308204 + MIR3 SINE MIR 78 186 -22 2260 111 0 0 chr2 26948397 26948703 -226307880 - AluSx SINE Alu -6 306 1 269 292 118 30 chr2 26949589 26949782 -226306801 + MIR SINE MIR 11 224 -38 439 253 82 0 chr2 26949984 26950130 -226306453 - MER103 DNA DNA -1 165 8 296 219 94 0 chr2 26950182 26950246 -226306337 + MIR3 SINE MIR 133 202 -6 2949 74 0 5 chr2 26950753 26951133 -226305450 + L1PA5 LINE L1 5777 6154 0 667 287 102 4 chr2 26951443 26951687 -226304896 + MLT1J LTR MaLR 8 275 -236 441 311 160 9 chr2 26952227 26952446 -226304137 + L2 LINE L2 3021 3272 0 225 94 0 0 chr2 26952751 26952783 -226303800 + (TTC)n Simple_repeat Simple_repeat 3 34 0 424 316 23 0 chr2 26953773 26953906 -226302677 + (CA)n Simple_repeat Simple_repeat 1 136 0 257 138 17 35 chr2 26953906 26953964 -226302619 - MER4-int LTR ERV1 -5431 1167 1111 216 258 31 0 chr2 26954018 26954115 -226302468 + (CA)n Simple_repeat Simple_repeat 1 100 0 299 326 11 11 chr2 26954124 26954213 -226302370 + (CACG)n Simple_repeat Simple_repeat 3 91 0 400 242 19 12 chr2 26954215 26954376 -226302207 + (CA)n Simple_repeat Simple_repeat 1 162 0 405 48 0 114 chr2 26956486 26956653 -226299930 + (CCCCAG)n Simple_repeat Simple_repeat 1 148 0 447 288 2 56 chr2 26956874 26957077 -226299506 - MIR SINE MIR -56 206 21 2138 89 4 0 chr2 26959246 26959561 -226297022 - AluSq SINE Alu 0 319 4 546 246 0 0 chr2 26962934 26963536 -226293047 + (TG)n Simple_repeat Simple_repeat 1 602 0 313 387 45 10 chr2 26964037 26964236 -226292347 + MIR SINE MIR 7 212 -50 278 329 100 7 chr2 26964332 26964472 -226292111 - MER117 DNA MER1_type -30 167 15 286 299 55 97 chr2 26965321 26965810 -226290773 + L2 LINE L2 2725 3225 -47 262 336 16 0 chr2 26966296 26966421 -226290162 + (TGGA)n Simple_repeat Simple_repeat 2 128 0 408 215 0 0 chr2 26966439 26966546 -226290037 + (TGGG)n Simple_repeat Simple_repeat 4 110 0 501 248 0 0 chr2 26966646 26966875 -226289708 + (TGGA)n Simple_repeat Simple_repeat 1 229 0 478 331 199 9 chr2 26966901 26967227 -226289356 + L3 LINE CR1 1184 1571 -6 464 318 98 0 chr2 26967829 26968002 -226288581 + MIR SINE MIR 47 236 -26 329 293 195 11 chr2 26968301 26968475 -226288108 + MIR3 SINE MIR 2 207 -1 265 301 49 24 chr2 26968589 26968712 -226287871 + MIR SINE MIR 72 197 -65 494 300 29 53 chr2 26969893 26970063 -226286520 + MER91A DNA MER1_type 31 196 0 617 253 52 11 chr2 26970441 26970615 -226285968 + MIR SINE MIR 20 200 -62 248 351 97 12 chr2 26970616 26970781 -226285802 - MER104 DNA Tc2 -1 179 1 372 320 134 58 chr2 26971349 26972056 -226284527 - L2 LINE L2 -1037 2277 1517 1003 143 122 15 chr2 26972577 26972773 -226283810 + MER20 DNA MER1_type 2 218 -1 200 353 20 29 chr2 26972941 26973043 -226283540 + L2 LINE L2 3159 3259 -13 235 371 60 18 chr2 26973120 26973287 -226283296 - L2 LINE L2 -107 3165 2992 488 288 49 18 chr2 26974506 26974669 -226281914 + MIR3 SINE MIR 23 190 -18 186 333 201 0 chr2 26974829 26974973 -226281610 + MIR SINE MIR 75 247 -15 313 294 89 41 chr2 26975575 26975721 -226280862 + MIR3 SINE MIR 18 170 -38 381 181 39 102 chr2 26975760 26975843 -226280740 + MER5B DNA MER1_type 39 113 -65 2011 127 7 3 chr2 26975843 26976135 -226280448 - AluSx SINE Alu -17 295 3 381 181 39 102 chr2 26976135 26976178 -226280405 + MER5B DNA MER1_type 113 157 -21 233 208 21 0 chr2 26976546 26976594 -226279989 - L2 LINE L2 -1 3271 3223 2030 119 0 20 chr2 26976649 26976951 -226279632 - AluSx SINE Alu -16 296 1 201 39 0 0 chr2 26976987 26977013 -226279570 + (GA)n Simple_repeat Simple_repeat 2 27 0 238 291 139 46 chr2 26977106 26977304 -226279279 + MIR SINE MIR 1 210 -52 2167 96 20 0 chr2 26977502 26977805 -226278778 - AluSg SINE Alu 0 310 2 290 350 36 21 chr2 26979282 26979476 -226277107 - L2 LINE L2 -581 2733 2537 1078 150 0 0 chr2 26979909 26980076 -226276507 - AluSg/x SINE Alu -2 308 142 400 257 88 47 chr2 26980197 26980368 -226276215 + MIR SINE MIR 72 249 -13 279 209 70 43 chr2 26981231 26981346 -226275237 - L1ME4a LINE L1 0 6121 6004 252 327 77 12 chr2 26981878 26982046 -226274537 + L3 LINE CR1 1190 1368 -209 334 304 105 29 chr2 26982761 26982932 -226273651 - MIR SINE MIR -3 259 76 351 44 0 0 chr2 26985428 26985473 -226271110 + (CA)n Simple_repeat Simple_repeat 2 46 0 418 291 64 22 chr2 26985524 26985727 -226270856 - MIR SINE MIR -56 206 3 2123 96 34 0 chr2 26986733 26987026 -226269557 + AluSx SINE Alu 1 303 -9 409 347 94 36 chr2 26988649 26988926 -226267657 - L3b LINE CR1 -154 1429 1137 216 268 52 62 chr2 26988984 26989081 -226267502 - L2 LINE L2 -458 2856 2761 236 277 119 20 chr2 26989323 26989424 -226267159 + L2 LINE L2 2906 3016 -256 226 289 12 54 chr2 26989700 26989861 -226266722 + MIR SINE MIR 91 241 -21 225 359 86 0 chr2 26992820 26992937 -226263646 - MIR SINE MIR -10 252 126 243 262 128 74 chr2 26994641 26994790 -226261793 - MIR3 SINE MIR -14 194 38 332 268 116 9 chr2 26995156 26995268 -226261315 - MIR SINE MIR -110 152 29 192 77 0 0 chr2 26995418 26995444 -226261139 + (TG)n Simple_repeat Simple_repeat 1 26 0 216 220 80 0 chr2 26996757 26996807 -226259776 - MIR SINE MIR -62 146 93 490 297 195 5 chr2 26997417 26997612 -226258971 - MIR SINE MIR -11 251 20 182 286 80 114 chr2 26997674 26997849 -226258734 + MIR3 SINE MIR 33 201 -7 447 248 252 9 chr2 26998232 26998442 -226258141 - MIR SINE MIR 0 262 2 537 289 49 36 chr2 26999667 26999892 -226256691 + MIR SINE MIR 15 242 -20 187 300 146 9 chr2 26999926 27000036 -226256547 + L2 LINE L2 3147 3271 -1 325 239 150 9 chr2 27000235 27000348 -226256235 - MIR3 SINE MIR -19 189 61 402 134 15 0 chr2 27000867 27000934 -226255649 - MER5A DNA MER1_type 0 189 122 506 250 86 8 chr2 27000946 27001074 -226255509 + MER63 DNA MER1_type 3 766 -70 599 153 42 0 chr2 27001104 27001222 -226255361 - MER5A DNA MER1_type -66 123 1 186 279 70 0 chr2 27001609 27001695 -226254888 - L3 LINE CR1 -49 1528 1437 355 231 67 10 chr2 27002808 27002912 -226253671 + MIR SINE MIR 20 129 -79 234 238 48 16 chr2 27003793 27003856 -226252727 - L2 LINE L2 0 3313 3249 1865 164 0 3 chr2 27004335 27004640 -226251943 + AluSx SINE Alu 1 304 -8 348 338 86 0 chr2 27004874 27005025 -226251558 + MIR3 SINE MIR 36 199 -9 359 280 175 7 chr2 27005385 27005528 -226251055 - L3 LINE CR1 -1 1576 1410 336 260 0 39 chr2 27005651 27005755 -226250828 + L2 LINE L2 3170 3269 -3 712 164 6 22 chr2 27005773 27005914 -226250669 + (TGGA)n Simple_repeat Simple_repeat 1 140 -40 2173 119 0 0 chr2 27005914 27006226 -226250357 + AluSx SINE Alu 1 312 0 712 164 6 22 chr2 27006226 27006267 -226250316 + (TGGA)n Simple_repeat Simple_repeat 140 180 0 446 153 0 10 chr2 27006299 27006397 -226250186 + (TGGA)n Simple_repeat Simple_repeat 1 97 0 219 343 37 9 chr2 27006539 27006647 -226249936 - L3 LINE CR1 -606 971 861 687 205 0 0 chr2 27006660 27006777 -226249806 - FLAM_A SINE Alu -15 127 11 375 254 153 25 chr2 27006922 27007040 -226249543 + L2 LINE L2 3181 3313 0 473 265 80 13 chr2 27007047 27007198 -226249385 - MIR SINE MIR -67 195 35 293 345 120 7 chr2 27007872 27008014 -226248569 - MIR SINE MIR -70 192 35 256 369 56 12 chr2 27009159 27009319 -226247264 - MIR SINE MIR 0 262 96 224 140 40 0 chr2 27010503 27010553 -226246030 + (TCTCTG)n Simple_repeat Simple_repeat 4 55 0 397 271 68 8 chr2 27010557 27010675 -226245908 + MER5B DNA MER1_type 1 125 -53 434 271 206 32 chr2 27011096 27011251 -226245332 + MIR SINE MIR 24 205 -57 2078 131 3 0 chr2 27011612 27011918 -226244665 + AluSx SINE Alu 1 307 -5 328 274 104 0 chr2 27012024 27012130 -226244453 - MIR SINE MIR -63 145 29 281 224 0 45 chr2 27012265 27012332 -226244251 - L2 LINE L2 -14 3258 3195 2178 151 0 20 chr2 27012773 27013117 -226243466 + MER1B DNA MER1_type 1 337 0 260 82 0 41 chr2 27013219 27013268 -226243315 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 368 192 26 13 chr2 27013327 27013405 -226243178 + MIR3 SINE MIR 91 169 -39 224 247 247 10 chr2 27013586 27013683 -226242900 - L2 LINE L2 0 3272 3153 209 247 65 13 chr2 27013797 27013874 -226242709 + L2 LINE L2 3122 3202 -70 186 234 31 47 chr2 27013961 27014025 -226242558 + MIR SINE MIR 187 249 -13 208 333 10 62 chr2 27014454 27014550 -226242033 - MIR SINE MIR -66 196 106 232 253 48 12 chr2 27015050 27015133 -226241450 + MIR SINE MIR 45 130 -132 372 224 82 10 chr2 27015237 27015335 -226241248 - MER20B DNA MER1_type -622 161 57 218 302 34 54 chr2 27018445 27018594 -226237989 - L2 LINE L2 -1 3271 3126 1975 77 8 0 chr2 27018618 27018877 -226237706 - AluSx SINE Alu -14 298 38 2059 119 7 0 chr2 27018977 27019272 -226237311 - AluSx SINE Alu -15 297 1 491 234 32 8 chr2 27019304 27019428 -226237155 - Charlie4 DNA MER1_type -1678 283 157 487 296 0 22 chr2 27020033 27020168 -226236415 + MIR3 SINE MIR 30 161 -47 215 244 0 0 chr2 27020348 27020393 -226236190 + MIR3 SINE MIR 157 201 -7 1100 116 11 28 chr2 27022186 27022367 -226234216 + AluSg/x SINE Alu 117 294 -18 725 126 0 10 chr2 27022367 27022470 -226234113 - AluJo/FLAM SINE Alu -194 118 17 205 333 0 13 chr2 27022668 27022743 -226233840 - MIR SINE MIR -86 122 49 518 302 36 40 chr2 27023074 27023109 -226233474 - L1MC4a LINE L1 -1879 5929 5895 1765 174 0 19 chr2 27023109 27023419 -226233164 - AluJo SINE Alu -8 304 1 518 302 36 40 chr2 27023419 27023605 -226232978 - L1MC4a LINE L1 -1913 5895 5709 439 249 90 26 chr2 27023781 27023970 -226232613 - L1MC4a LINE L1 -2184 5624 5424 1095 195 27 14 chr2 27023979 27024200 -226232383 - AluJb SINE Alu -88 224 1 836 206 38 0 chr2 27024205 27024389 -226232194 - AluJo SINE Alu -1 311 121 261 305 45 32 chr2 27024389 27024512 -226232071 - L1MC4a LINE L1 -2397 5411 5284 2176 129 2 104 chr2 27024512 27024875 -226231708 - L1MB8 LINE L1 0 6178 5864 1529 167 29 4 chr2 27024875 27025182 -226231401 + AluSx SINE Alu 1 314 0 2176 129 2 104 chr2 27025182 27025259 -226231324 - L1MB8 LINE L1 -314 5864 5781 261 305 45 32 chr2 27025259 27025289 -226231294 - L1MC4a LINE L1 -2524 5284 5256 247 288 11 79 chr2 27025420 27025546 -226231037 - L1P LINE L1 -1074 5072 4960 2125 95 3 30 chr2 27025546 27025851 -226230732 - AluSx SINE Alu -15 297 1 247 288 11 79 chr2 27025851 27025901 -226230682 - L1P LINE L1 -1186 4960 4908 243 249 43 155 chr2 27026062 27026144 -226230439 - L1MC5 LINE L1 -48 7913 7823 2189 113 3 0 chr2 27026144 27026453 -226230130 + AluSx SINE Alu 1 310 -2 243 249 43 155 chr2 27026453 27026524 -226230059 - L1MC5 LINE L1 -138 7823 7746 6412 112 6 44 chr2 27026524 27027531 -226229052 + LTR5 LTR ERVK 1 969 0 243 249 43 155 chr2 27027531 27027555 -226229028 - L1MC5 LINE L1 -215 7746 7721 1574 162 3 55 chr2 27027555 27027882 -226228701 - AluJb SINE Alu -2 310 1 243 249 43 155 chr2 27027882 27027979 -226228604 - L1MC5 LINE L1 -240 7721 7668 2224 181 116 13 chr2 27027981 27028439 -226228144 + MLT1D LTR MaLR 1 505 0 1939 118 42 7 chr2 27028507 27028795 -226227788 - AluJb SINE Alu -14 298 1 312 281 62 0 chr2 27028944 27029072 -226227511 + MIR3 SINE MIR 62 197 -11 797 169 0 0 chr2 27029163 27029281 -226227302 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 27029281 27029321 -226227262 + AT_rich Low_complexity Low_complexity 1 40 0 571 207 45 34 chr2 27029547 27029630 -226226953 + MER53 DNA DNA 2 83 -106 3215 113 20 73 chr2 27029630 27029781 -226226802 - LTR26B LTR ERV1 -1 530 372 1682 155 33 7 chr2 27029781 27030084 -226226499 - AluJo SINE Alu -1 311 1 3215 113 20 73 chr2 27030084 27030304 -226226279 - LTR26B LTR ERV1 -159 372 196 1682 152 33 7 chr2 27030304 27030580 -226226003 - AluJb SINE Alu -9 303 21 3215 113 20 73 chr2 27030580 27030767 -226225816 - LTR26B LTR ERV1 -335 196 1 571 207 45 34 chr2 27030767 27030862 -226225721 + MER53 DNA DNA 83 182 -7 2055 142 0 0 chr2 27030934 27031229 -226225354 + AluSx SINE Alu 1 295 -17 1861 137 33 23 chr2 27031313 27031619 -226224964 + AluSx SINE Alu 4 312 0 182 233 82 14 chr2 27031911 27031984 -226224599 - L2 LINE L2 -59 3213 3136 265 289 59 19 chr2 27032456 27032563 -226224020 - MIR SINE MIR -65 143 51 2289 75 20 0 chr2 27032828 27033120 -226223463 + AluSx SINE Alu 3 300 -12 1857 100 100 14 chr2 27033478 27033708 -226222875 + LTR24C LTR ERV1 1 276 -359 2207 99 3 3 chr2 27033708 27034002 -226222581 - AluSx SINE Alu -18 294 1 1857 100 100 14 chr2 27034002 27034142 -226222441 + LTR24C LTR ERV1 276 403 -232 2921 158 73 8 chr2 27034285 27034804 -226221779 - MER41A LTR ERV1 0 554 2 214 264 92 0 chr2 27035001 27035088 -226221495 + L2 LINE L2 2939 3033 -239 214 316 94 8 chr2 27035308 27035425 -226221158 + L2 LINE L2 3182 3308 -5 263 114 0 2 chr2 27035842 27036078 -226220505 + AluSx SINE Alu 1 293 -8 252 293 57 57 chr2 27036173 27036313 -226220270 + L2 LINE L2 2910 3049 -223 1526 177 30 7 chr2 27036478 27036749 -226219834 - AluJo SINE Alu -29 283 7 2020 135 0 7 chr2 27036789 27037085 -226219498 + AluSx SINE Alu 3 296 -16 2117 148 45 5 chr2 27037092 27037511 -226219072 - LTR56 LTR ERV1 -2 443 8 4310 113 29 0 chr2 27037576 27038193 -226218390 + MER41B LTR ERV1 1 635 0 2011 102 7 7 chr2 27038304 27038587 -226217996 - AluSp SINE Alu -30 283 1 1709 197 3 3 chr2 27038587 27038887 -226217696 - AluSx SINE Alu -12 300 1 1916 80 9 49 chr2 27038917 27039196 -226217387 + MER4E LTR ERV1 1 267 -512 2074 83 31 14 chr2 27039196 27039486 -226217097 + AluSg SINE Alu 1 295 -15 1916 80 9 49 chr2 27039486 27039532 -226217051 + MER4E LTR ERV1 267 313 -466 1415 70 74 0 chr2 27039543 27039758 -226216825 + MER4E LTR ERV1 536 766 0 299 345 43 22 chr2 27039847 27039986 -226216597 + MIR3 SINE MIR 2 143 -65 2268 97 0 3 chr2 27040289 27040600 -226215983 + AluSx SINE Alu 1 310 -2 229 243 129 0 chr2 27041725 27041795 -226214788 - L2 LINE L2 -842 2472 2394 281 54 0 0 chr2 27041985 27042022 -226214561 - AluSp/q SINE Alu -35 268 232 202 320 57 66 chr2 27042022 27042144 -226214439 - L2 LINE L2 -37 3235 3115 2146 120 3 0 chr2 27042813 27043114 -226213469 + AluSx SINE Alu 1 302 -10 734 289 44 18 chr2 27043196 27043421 -226213162 - MIR SINE MIR -20 242 12 329 302 134 13 chr2 27043465 27043614 -226212969 - MIR3 SINE MIR -21 187 21 755 137 32 8 chr2 27044224 27044348 -226212235 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 27044348 27044369 -226212214 + AT_rich Low_complexity Low_complexity 1 21 0 324 221 117 0 chr2 27044747 27044824 -226211759 + MIR3 SINE MIR 93 178 -30 2076 98 27 10 chr2 27044855 27045152 -226211431 - AluY SINE Alu -9 302 1 1755 150 49 0 chr2 27045152 27045438 -226211145 - AluJo SINE Alu -12 300 1 1849 170 0 7 chr2 27046618 27046924 -226209659 + AluJb SINE Alu 1 304 -8 2036 153 0 0 chr2 27046931 27047239 -226209344 + AluSx SINE Alu 1 308 -4 27 0 0 0 chr2 27047812 27047839 -226208744 + AT_rich Low_complexity Low_complexity 1 27 0 887 147 0 0 chr2 27048185 27048314 -226208269 + FLAM_C SINE Alu 5 133 0 438 346 257 10 chr2 27048869 27049262 -226207321 + L3 LINE CR1 803 1292 -285 300 381 19 12 chr2 27049336 27049496 -226207087 + MER117 DNA MER1_type 33 193 -4 738 182 6 50 chr2 27049604 27049714 -226206869 - Charlie4 DNA MER1_type 0 1961 1861 2228 76 10 10 chr2 27049714 27050017 -226206566 + AluY SINE Alu 1 303 -8 738 182 6 50 chr2 27050017 27050087 -226206496 - Charlie4 DNA MER1_type -100 1861 1789 337 281 8 11 chr2 27050854 27050982 -226205601 - MIR SINE MIR -79 183 17 502 318 112 33 chr2 27052482 27052903 -226203680 + L2 LINE L2 2819 3272 0 261 98 0 0 chr2 27053764 27053805 -226202778 + (TG)n Simple_repeat Simple_repeat 1 41 0 2190 122 0 0 chr2 27055545 27055848 -226200735 - AluSx SINE Alu -9 303 1 276 149 0 0 chr2 27056953 27057000 -226199583 + (CACG)n Simple_repeat Simple_repeat 4 50 0 213 299 23 69 chr2 27058969 27059056 -226197527 - L2 LINE L2 -1 3271 3189 410 279 95 0 chr2 27059752 27059910 -226196673 - MIR3 SINE MIR -3 205 33 229 154 0 0 chr2 27059934 27059973 -226196610 - L2 LINE L2 -24 3248 3210 498 108 0 0 chr2 27059985 27060059 -226196524 + (TTCTCC)n Simple_repeat Simple_repeat 6 79 0 2195 95 7 3 chr2 27060064 27060358 -226196225 - AluSx SINE Alu -17 295 1 570 244 131 0 chr2 27060547 27060715 -226195868 + MIR SINE MIR 19 208 -54 1703 244 32 30 chr2 27061396 27061691 -226194892 + MER63B DNA MER1_type 1 299 -763 1792 156 50 0 chr2 27061691 27061973 -226194610 - AluJo SINE Alu -16 296 1 1703 244 32 30 chr2 27061973 27062112 -226194471 + MER63B DNA MER1_type 299 436 0 2399 122 27 11 chr2 27062122 27062491 -226194092 + THE1C LTR MaLR 1 375 0 510 268 35 0 chr2 27062720 27062862 -226193721 - MER5B DNA MER1_type -25 153 7 2126 107 43 0 chr2 27063714 27064013 -226192570 + AluSx SINE Alu 1 312 0 211 296 0 0 chr2 27065368 27065412 -226191171 - L2 LINE L2 -6 3266 3223 197 318 139 0 chr2 27065522 27065651 -226190932 - L2 LINE L2 -212 3060 2914 231 313 16 0 chr2 27066500 27066564 -226190019 + L2 LINE L2 3201 3265 -7 387 265 5 0 chr2 27066579 27066699 -226189884 - HAL1b LINE L1 -44 6077 1194 312 48 0 0 chr2 27066699 27066741 -226189842 - 5S rRNA rRNA -79 42 1 1906 275 37 36 chr2 27066796 27067527 -226189056 - HAL1b LINE L1 -170 1178 447 486 328 238 12 chr2 27069330 27069915 -226186668 - L2 LINE L2 -784 2530 1814 189 303 172 20 chr2 27070325 27070424 -226186159 - MIR3 SINE MIR -2 206 93 798 160 0 15 chr2 27070654 27070785 -226185798 - FLAM_C SINE Alu -10 133 5 185 337 47 12 chr2 27072221 27072307 -226184276 - MIR SINE MIR -66 196 108 189 362 0 29 chr2 27073451 27073556 -226183027 - MIR SINE MIR -64 144 43 263 333 14 16 chr2 27073875 27074088 -226182495 - MIR SINE MIR -7 255 1 650 298 17 6 chr2 27074867 27075048 -226181535 - MIR SINE MIR -71 191 9 203 360 72 14 chr2 27076572 27076711 -226179872 + L3 LINE CR1 1164 1310 -267 452 273 197 10 chr2 27079053 27079251 -226177332 - MIR SINE MIR 0 262 28 324 241 36 45 chr2 27079327 27079439 -226177144 + MIR3 SINE MIR 3 113 -95 226 118 78 20 chr2 27080546 27080597 -226175986 - MIR SINE MIR -29 233 180 915 264 155 28 chr2 27080640 27081595 -226174988 + L2 LINE L2 2169 3311 -2 303 250 33 43 chr2 27081597 27081689 -226174894 - MIR SINE MIR -158 104 14 673 258 18 0 chr2 27081706 27081873 -226174710 + MLT1J LTR MaLR 54 223 -288 2535 52 3 0 chr2 27082006 27082297 -226174286 + AluY SINE Alu 17 308 -3 231 279 0 0 chr2 27082370 27082438 -226174145 + MLT1J LTR MaLR 441 508 -3 485 221 29 0 chr2 27082440 27082544 -226174039 + MIR SINE MIR 112 218 -44 189 219 219 14 chr2 27082830 27082903 -226173680 - MIR SINE MIR -63 145 58 1400 44 0 6 chr2 27083937 27084118 -226172465 + (TTC)n Simple_repeat Simple_repeat 1 180 0 675 195 12 6 chr2 27084119 27084288 -226172295 + CT-rich Low_complexity Low_complexity 1 170 0 2203 128 3 0 chr2 27084288 27084586 -226171997 - AluSq SINE Alu -14 299 1 695 296 12 83 chr2 27084602 27085025 -226171558 + MLT1J LTR MaLR 26 418 -93 389 256 21 89 chr2 27085102 27085293 -226171290 + MER5B DNA MER1_type 1 178 0 401 247 21 0 chr2 27085347 27085440 -226171143 - MER5A DNA MER1_type -80 109 15 2108 222 69 27 chr2 27086520 27087084 -226169499 + MLT1E LTR MaLR 3 590 -3 1094 227 23 15 chr2 27087428 27087850 -226168733 - L1ME LINE L1 -4904 2053 1534 1600 210 59 2 chr2 27087852 27088263 -226168320 + MLT2B1 LTR ERVL 1 480 -40 255 61 0 0 chr2 27088272 27088305 -226168278 + (TG)n Simple_repeat Simple_repeat 2 34 0 354 343 0 9 chr2 27088305 27088413 -226168170 - L1MC4 LINE L1 -1341 6701 6595 348 138 0 12 chr2 27088416 27088488 -226168095 + MLT2B1 LTR ERVL 386 520 0 1673 248 84 64 chr2 27088489 27089228 -226167355 - L1ME LINE L1 -5310 1637 884 183 80 0 0 chr2 27089298 27089323 -226167260 - MIR SINE MIR -67 141 117 493 185 74 9 chr2 27089672 27089780 -226166803 - MIR3 SINE MIR -5 203 89 599 224 75 17 chr2 27090481 27090655 -226165928 + Charlie7 DNA MER1_type 385 568 -2044 180 0 0 0 chr2 27090861 27090881 -226165702 + (CA)n Simple_repeat Simple_repeat 1 20 0 4298 232 114 19 chr2 27090970 27091413 -226165170 + Charlie7 DNA MER1_type 998 1397 -1215 2326 92 0 10 chr2 27091413 27091718 -226164865 + AluSq SINE Alu 1 302 -11 4298 232 114 19 chr2 27091718 27092729 -226163854 + Charlie7 DNA MER1_type 1397 2591 -21 297 250 158 0 chr2 27092729 27092849 -226163734 - MIR3 SINE MIR -51 157 19 2194 116 0 13 chr2 27092968 27093278 -226163305 + AluSx SINE Alu 1 306 -6 2411 96 0 0 chr2 27094742 27095035 -226161548 + AluSc SINE Alu 1 293 -16 2161 103 7 3 chr2 27095071 27095388 -226161195 + AluSx SINE Alu 2 319 0 787 257 49 13 chr2 27095669 27095895 -226160688 + L1MC3 LINE L1 4509 4742 -1404 1134 186 51 5 chr2 27095895 27096110 -226160473 + AluJo SINE Alu 1 225 -87 270 0 0 0 chr2 27096172 27096202 -226160381 + (TA)n Simple_repeat Simple_repeat 2 31 0 1404 239 31 18 chr2 27096217 27096668 -226159915 + L1MC3 LINE L1 4755 5211 -935 * 2170 234 80 67 chr2 27096667 27097581 -226159002 + L1MC3 LINE L1 5735 6660 -1125 1810 189 39 61 chr2 27097586 27097712 -226158871 + L1MD3 LINE L1 7416 7543 -452 1513 170 51 4 chr2 27097712 27097988 -226158595 + AluJo SINE Alu 1 289 -23 1810 189 39 61 chr2 27097988 27098322 -226158261 + L1MD3 LINE L1 7543 7866 -129 250 203 0 34 chr2 27098349 27098408 -226158175 - L1MD3 LINE L1 -53 7942 7886 625 260 13 4 chr2 27098433 27098660 -226157923 + L1MEc LINE L1 660 888 -5508 1907 158 0 17 chr2 27098661 27098959 -226157624 + AluJb SINE Alu 15 307 -5 885 314 27 36 chr2 27098962 27099029 -226157554 + L1MEc LINE L1 1388 1454 -4942 2142 148 0 0 chr2 27099029 27099340 -226157243 + AluJo SINE Alu 1 311 -1 885 314 27 36 chr2 27099340 27099747 -226156836 + L1MEc LINE L1 1454 1858 -4538 * 1237 239 59 20 chr2 27099741 27100223 -226156360 + L1MEc LINE L1 2586 3114 -3101 378 241 45 9 chr2 27102473 27102585 -226153998 + MIR SINE MIR 111 226 -36 2316 102 0 10 chr2 27102886 27103189 -226153394 + AluSx SINE Alu 1 300 -12 247 403 0 15 chr2 27103299 27103433 -226153150 + MER5B DNA MER1_type 13 144 -34 416 372 76 14 chr2 27105616 27105839 -226150744 - MIR SINE MIR -6 256 20 462 300 67 22 chr2 27106193 27106373 -226150210 + L3 LINE CR1 439 626 -951 596 280 98 44 chr2 27106562 27106837 -226149746 + L1ME4a LINE L1 5645 5934 -187 286 310 171 12 chr2 27108076 27108334 -226148249 - L3 LINE CR1 -100 1477 1179 292 271 9 65 chr2 27108471 27108578 -226148005 - MIR SINE MIR -44 218 118 202 318 34 0 chr2 27109505 27109593 -226146990 + MIR SINE MIR 56 146 -62 224 330 57 0 chr2 27109691 27109779 -226146804 - MIR SINE MIR -77 185 93 290 292 21 52 chr2 27109958 27110102 -226146481 + MIR SINE MIR 16 156 -62 344 340 27 27 chr2 27110395 27110545 -226146038 - MIR3 SINE MIR -43 165 16 195 314 49 0 chr2 27110557 27110659 -226145924 - MIR SINE MIR -96 166 60 302 315 30 36 chr2 27110967 27111132 -226145451 + MIR SINE MIR 67 230 -32 207 169 108 62 chr2 27111976 27112041 -226144542 - MIR SINE MIR -63 145 78 252 0 0 0 chr2 27112050 27112078 -226144505 + (TG)n Simple_repeat Simple_repeat 1 28 0 494 266 36 7 chr2 27112339 27112478 -226144105 + MIR SINE MIR 79 221 -41 292 340 0 42 chr2 27112824 27112968 -226143615 + MIR3 SINE MIR 3 140 -68 1848 155 3 48 chr2 27113220 27113529 -226143054 - AluJb SINE Alu -17 295 1 577 308 37 27 chr2 27114424 27114723 -226141860 + HAL1 LINE L1 1 302 -2205 251 279 25 0 chr2 27114958 27115037 -226141546 + HAL1 LINE L1 199 279 -2228 282 228 38 13 chr2 27115042 27115121 -226141462 + HAL1 LINE L1 199 279 -2228 3833 234 139 100 chr2 27115126 27116348 -226140235 + HAL1 LINE L1 199 1372 -1135 800 194 0 0 chr2 27116348 27116482 -226140101 + AluJo SINE Alu 1 134 -178 3833 234 139 100 chr2 27116482 27117009 -226139574 + HAL1 LINE L1 1372 1877 -630 2341 98 0 0 chr2 27117009 27117321 -226139262 + AluSx SINE Alu 1 312 0 3833 234 139 100 chr2 27117321 27117555 -226139028 + HAL1 LINE L1 1877 2400 -107 29 40 0 40 chr2 27117601 27117631 -226138952 + AT_rich Low_complexity Low_complexity 1 31 -42 2221 129 0 0 chr2 27117631 27117966 -226138617 + AluSx SINE Alu 1 312 0 29 40 0 40 chr2 27117966 27117992 -226138591 + AT_rich Low_complexity Low_complexity 31 57 -16 1833 184 3 0 chr2 27117992 27118303 -226138280 + AluJb SINE Alu 1 312 0 29 40 0 40 chr2 27118303 27118320 -226138263 + AT_rich Low_complexity Low_complexity 57 73 0 24 32 0 0 chr2 27119492 27119523 -226137060 + AT_rich Low_complexity Low_complexity 1 31 0 1611 62 48 140 chr2 27119644 27119980 -226136603 + L1MA1 LINE L1 5990 6294 -8 222 310 0 0 chr2 27120144 27120215 -226136368 - L3 LINE CR1 -156 1421 1351 2491 81 3 0 chr2 27120278 27120576 -226136007 - AluSp SINE Alu -10 303 5 2611 142 4 9 chr2 27120632 27121090 -226135493 - L1P LINE L1 -962 5184 4729 438 210 66 18 chr2 27121358 27121525 -226135058 + L1ME4a LINE L1 5946 6120 -1 345 230 56 112 chr2 27122204 27122365 -226134218 + MIR3 SINE MIR 56 207 -1 201 128 26 26 chr2 27123314 27123353 -226133230 - MIR SINE MIR -118 144 106 209 180 229 0 chr2 27124742 27124803 -226131780 - MIR3 SINE MIR -10 198 124 398 288 21 0 chr2 27125275 27125432 -226131151 + MIR SINE MIR 33 190 -61 595 305 52 5 chr2 27125502 27125715 -226130868 + MIR SINE MIR 15 237 -25 1879 172 3 0 chr2 27126113 27126409 -226130174 + AluJo SINE Alu 1 297 -15 267 243 14 0 chr2 27126618 27126688 -226129895 + LTR33 LTR ERVL 51 121 -400 2219 128 0 3 chr2 27127394 27127706 -226128877 + AluSx SINE Alu 1 311 -1 304 206 55 0 chr2 27127743 27127816 -226128767 - MER97a DNA MER1_type? -718 176 100 418 274 48 8 chr2 27127961 27128085 -226128498 - MIR SINE MIR -82 180 52 443 298 47 53 chr2 27128175 27128346 -226128237 - MIR SINE MIR -43 219 50 318 281 70 0 chr2 27128759 27128887 -226127696 + MIR3 SINE MIR 66 202 -6 294 315 73 30 chr2 27128947 27129112 -226127471 - MER5B DNA MER1_type -1 177 6 386 245 20 19 chr2 27129241 27129360 -226127223 + MIR SINE MIR 38 154 -58 592 318 16 24 chr2 27129367 27129619 -226126964 - MIR SINE MIR 0 262 13 472 295 174 9 chr2 27130240 27130464 -226126119 - L3 LINE CR1 -871 706 446 2225 250 91 54 chr2 27130792 27131889 -226124694 - HAL1 LINE L1 -7 2500 1363 282 273 13 0 chr2 27131885 27131962 -226124621 - HAL1 LINE L1 -1638 869 792 * 272 234 168 105 chr2 27131963 27132391 -226124192 - HAL1 LINE L1 -1989 518 64 349 275 58 0 chr2 27132440 27132578 -226124005 - L1MC4a LINE L1 -1915 5893 5748 2134 115 3 26 chr2 27133588 27133901 -226122682 + AluSx SINE Alu 1 306 -6 1958 53 0 8 chr2 27134112 27134356 -226122227 - L1PA7 LINE L1 0 6154 5913 266 104 0 21 chr2 27135006 27135054 -226121529 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 1648 72 36 5 chr2 27135863 27136086 -226120497 - MER30 DNA MER1_type 0 230 1 807 207 186 0 chr2 27136517 27136710 -226119873 + MIR SINE MIR 31 259 -3 1699 158 49 3 chr2 27136723 27137007 -226119576 + AluSx SINE Alu 1 297 -15 1116 133 0 0 chr2 27137041 27137199 -226119384 + FRAM SINE Alu 16 173 -3 381 268 24 49 chr2 27137307 27137471 -226119112 - LTR33 LTR ERVL -3 518 359 180 372 0 12 chr2 27137857 27137943 -226118640 - L2 LINE L2 -1 3271 3187 183 80 0 0 chr2 27137989 27138014 -226118569 + (A)n Simple_repeat Simple_repeat 1 25 0 285 98 0 0 chr2 27138025 27138066 -226118517 + (CA)n Simple_repeat Simple_repeat 1 41 0 585 262 89 44 chr2 27138194 27138419 -226118164 + MIR SINE MIR 14 248 -14 1612 130 0 0 chr2 27138428 27138644 -226117939 + AluSg/x SINE Alu 82 297 -13 2319 111 0 0 chr2 27138681 27138979 -226117604 + AluSq SINE Alu 1 298 -15 272 269 37 46 chr2 27139313 27139421 -226117162 - MER113 DNA MER1_type? -100 421 315 191 283 50 0 chr2 27139492 27139552 -226117031 - L2 LINE L2 -47 3225 3163 685 202 50 28 chr2 27139749 27139967 -226116616 - MER113 DNA MER1_type? -262 259 37 300 111 0 0 chr2 27139967 27140021 -226116562 + (TC)n Simple_repeat Simple_repeat 1 54 0 4771 180 23 11 chr2 27140622 27140858 -226115725 + L1MB7 LINE L1 5254 5486 -698 2189 142 0 0 chr2 27140858 27141169 -226115414 + AluJb SINE Alu 2 312 0 4771 180 23 11 chr2 27141169 27141848 -226114735 + L1MB7 LINE L1 5486 6180 -4 2151 141 0 0 chr2 27143758 27144062 -226112521 + AluSq SINE Alu 1 304 -9 401 262 138 7 chr2 27144241 27144386 -226112197 - MIR3 SINE MIR -9 199 36 208 175 0 0 chr2 27144509 27144549 -226112034 - MIR SINE MIR -134 74 35 928 283 110 55 chr2 27144725 27145751 -226110832 - L2 LINE L2 0 3272 2174 287 161 65 16 chr2 27145753 27145815 -226110768 - L2 LINE L2 -70 3243 3179 246 271 108 16 chr2 27146596 27146725 -226109858 + L1M3de LINE L1 1668 1808 -4845 526 290 115 19 chr2 27148225 27148539 -226108044 + L2 LINE L2 2541 2884 -430 259 313 109 20 chr2 27148715 27148862 -226107721 - MIR3 SINE MIR -46 162 3 252 0 0 0 chr2 27149718 27149746 -226106837 + (GA)n Simple_repeat Simple_repeat 1 28 0 213 39 0 0 chr2 27149994 27150020 -226106563 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 1371 62 0 0 chr2 27150020 27150198 -226106385 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 237 196 0 0 chr2 27150198 27150249 -226106334 + GA-rich Low_complexity Low_complexity 1 51 0 857 145 0 43 chr2 27150981 27151119 -226105464 - FLAM_C SINE Alu 0 133 2 3011 6 0 0 chr2 27151130 27151447 -226105136 - AluYb8 SINE Alu -1 317 1 909 125 7 13 chr2 27151481 27151633 -226104950 + L1PB2 LINE L1 5999 6149 -2 290 300 8 50 chr2 27151831 27151900 -226104683 + L3 LINE CR1 1127 1190 -387 2402 92 0 0 chr2 27151900 27152192 -226104391 - AluSc SINE Alu -14 295 4 290 300 8 50 chr2 27152192 27152242 -226104341 + L3 LINE CR1 1190 1241 -336 644 238 100 128 chr2 27152246 27152848 -226103735 - MLT1K LTR MaLR -2 586 2 223 306 65 86 chr2 27152894 27153126 -226103457 + L2 LINE L2 2704 2930 -384 2337 101 0 0 chr2 27153269 27153565 -226103018 + AluSx SINE Alu 1 296 -16 228 216 39 29 chr2 27154626 27154728 -226101855 + L1MEd LINE L1 83 185 -5934 428 284 63 55 chr2 27154795 27155049 -226101534 + L1MEd LINE L1 646 901 -5218 1594 219 28 14 chr2 27155054 27155584 -226100999 - L1MEc LINE L1 -3605 2610 2116 655 308 76 34 chr2 27155595 27155782 -226100801 - L1MC4a LINE L1 -1942 5866 5688 1949 196 0 0 chr2 27155782 27156094 -226100489 - AluSx SINE Alu 0 312 1 655 308 76 34 chr2 27156094 27156263 -226100320 - L1MC4a LINE L1 -2120 5688 5495 444 112 45 0 chr2 27156277 27156366 -226100217 + CT-rich Low_complexity Low_complexity 4 96 0 243 236 106 50 chr2 27156404 27156488 -226100095 - L1MC4a LINE L1 -2381 5427 5349 1934 138 53 76 chr2 27156488 27156588 -226099995 + MLT1B LTR MaLR 3 104 -286 2241 125 6 0 chr2 27156588 27156899 -226099684 - AluSq SINE Alu 0 313 1 1934 138 53 76 chr2 27156899 27157195 -226099388 + MLT1B LTR MaLR 104 390 0 243 236 106 50 chr2 27157195 27157271 -226099312 - L1MC4a LINE L1 -2459 5349 5258 2222 99 0 49 chr2 27157278 27157602 -226098981 + AluSg SINE Alu 2 309 -1 373 280 45 30 chr2 27157620 27157752 -226098831 + MER94 DNA DNA 1 134 0 3752 181 20 24 chr2 27157799 27158583 -226098000 - L1MC2 LINE L1 -2 6342 5562 1126 123 12 6 chr2 27158590 27158753 -226097830 + AluSg/x SINE Alu 123 286 -24 4491 200 51 65 chr2 27158763 27159745 -226096838 - L1MC2 LINE L1 -743 5403 4629 5581 60 17 14 chr2 27159745 27160460 -226096123 - SVA Other Other -1 1385 669 4491 200 51 65 chr2 27160460 27161051 -226095532 - L1MC2 LINE L1 -1517 4629 4032 24 32 0 0 chr2 27161085 27161116 -226095467 + AT_rich Low_complexity Low_complexity 1 31 0 373 271 52 66 chr2 27161119 27161143 -226095440 - L1MC4a LINE L1 -1007 5139 5116 2492 77 0 0 chr2 27161143 27161442 -226095141 - AluY SINE Alu -12 299 1 373 271 52 66 chr2 27161442 27161597 -226094986 - L1MC4a LINE L1 -1030 5116 4957 852 296 69 13 chr2 27161748 27162066 -226094517 + LTR16B LTR ERVL 129 464 0 372 293 70 22 chr2 27162544 27162817 -226093766 - L1MC4a LINE L1 -1326 4820 4535 508 266 62 50 chr2 27162951 27163210 -226093373 - L2 LINE L2 -187 3085 2824 380 310 96 83 chr2 27163248 27163370 -226093213 - MIR SINE MIR -30 232 104 1525 148 48 41 chr2 27163370 27163640 -226092943 + AluJo SINE Alu 25 296 -16 380 310 96 83 chr2 27163640 27163746 -226092837 - MIR SINE MIR -158 104 1 266 296 14 0 chr2 27164075 27164146 -226092437 - L2 LINE L2 0 3272 3201 330 182 0 0 chr2 27164336 27164402 -226092181 + CT-rich Low_complexity Low_complexity 4 69 0 334 271 35 0 chr2 27164402 27164487 -226092096 - L2 LINE L2 -1 3271 3184 572 256 50 6 chr2 27164727 27164887 -226091696 + MIR SINE MIR 32 198 -64 * 654 239 101 27 chr2 27164886 27165074 -226091509 - L2 LINE L2 -4 3309 3108 360 230 123 70 chr2 27165074 27165261 -226091322 - LTR16A1 LTR ERVL 0 457 261 830 119 8 0 chr2 27165394 27165528 -226091055 + (GGAA)n Simple_repeat Simple_repeat 1 135 0 586 169 8 8 chr2 27165712 27165836 -226090747 + GA-rich Low_complexity Low_complexity 2 125 0 563 263 19 52 chr2 27166180 27166393 -226090190 + MIR3 SINE MIR 3 208 0 693 284 34 5 chr2 27166726 27166930 -226089653 + MER63A DNA MER1_type 1 210 0 224 256 137 77 chr2 27166937 27167054 -226089529 - MIR SINE MIR -119 143 20 314 290 0 83 chr2 27167095 27167240 -226089343 + MIR SINE MIR 21 153 -109 291 341 0 0 chr2 27168026 27168114 -226088469 + (CA)n Simple_repeat Simple_repeat 2 89 0 241 360 33 7 chr2 27169528 27169681 -226086902 - MIR3 SINE MIR -30 178 22 2047 111 68 0 chr2 27170305 27170585 -226085998 + AluSx SINE Alu 1 299 -13 2695 110 30 46 chr2 27171322 27171688 -226084895 + MSTC LTR MaLR 1 360 -68 2320 107 0 3 chr2 27171688 27171997 -226084586 + AluSx SINE Alu 1 308 -4 2695 110 30 46 chr2 27171997 27172065 -226084518 + MSTC LTR MaLR 360 428 0 1297 152 43 0 chr2 27172210 27172420 -226084163 + MER20 DNA MER1_type 1 219 0 1315 267 56 45 chr2 27172473 27173008 -226083575 + LTR67 LTR ERVL 4 544 -13 290 289 102 55 chr2 27174013 27174141 -226082442 - L2 LINE L2 0 3313 3180 292 335 51 47 chr2 27174345 27174560 -226082023 - L2 LINE L2 -382 2932 2717 205 157 20 39 chr2 27174874 27174925 -226081658 + GA-rich Low_complexity Low_complexity 2 51 0 405 243 257 15 chr2 27174959 27175095 -226081488 - MIR3 SINE MIR -24 184 16 231 36 0 0 chr2 27175142 27175170 -226081413 + (TG)n Simple_repeat Simple_repeat 1 28 0 210 257 35 106 chr2 27176349 27176462 -226080121 + MIR3 SINE MIR 104 208 0 209 281 0 18 chr2 27177834 27177891 -226078692 - L2 LINE L2 0 3272 3217 487 291 64 69 chr2 27177956 27178030 -226078553 + MIR SINE MIR 3 76 -186 2179 119 0 22 chr2 27178030 27178349 -226078234 - AluSx SINE Alu 0 312 1 487 291 64 69 chr2 27178349 27178477 -226078106 + MIR SINE MIR 76 204 -58 222 336 19 9 chr2 27178498 27178605 -226077978 - L2 LINE L2 -338 2934 2827 286 213 12 100 chr2 27179392 27179472 -226077111 - MIR SINE MIR -58 150 81 492 315 61 11 chr2 27180075 27180256 -226076327 - MIR3 SINE MIR -15 193 4 189 321 0 0 chr2 27180833 27180889 -226075694 - L2 LINE L2 -10 3262 3207 * 667 305 141 14 chr2 27180886 27181247 -226075336 - L3 LINE CR1 -70 1507 1101 216 67 0 0 chr2 27181450 27181480 -226075103 + (CA)n Simple_repeat Simple_repeat 2 31 0 182 300 190 10 chr2 27181817 27181917 -226074666 + MIR3 SINE MIR 84 201 -7 432 51 0 0 chr2 27182023 27182082 -226074501 + (CA)n Simple_repeat Simple_repeat 1 59 0 245 313 52 10 chr2 27183316 27183412 -226073171 - L2 LINE L2 -20 3252 3153 183 283 19 19 chr2 27183455 27183508 -226073075 - MIR SINE MIR -182 80 28 592 255 32 58 chr2 27183662 27183850 -226072733 - MIR3 SINE MIR -6 202 20 270 323 53 63 chr2 27184294 27184483 -226072100 - L2 LINE L2 -214 3058 2872 278 380 23 0 chr2 27184673 27184802 -226071781 - MIR3 SINE MIR -11 197 66 622 209 16 8 chr2 27185106 27185235 -226071348 + MIR3 SINE MIR 58 187 -21 435 254 244 40 chr2 27185874 27186075 -226070508 + MIR SINE MIR 15 256 -6 267 320 40 0 chr2 27186349 27186449 -226070134 - MIR3 SINE MIR -21 187 84 187 337 23 23 chr2 27186464 27186550 -226070033 - MIR SINE MIR -106 156 71 525 308 41 0 chr2 27186903 27187075 -226069508 + MIR3 SINE MIR 20 198 -10 242 239 26 53 chr2 27187169 27187282 -226069301 + (TCTCTG)n Simple_repeat Simple_repeat 5 114 0 201 139 0 0 chr2 27187358 27187401 -226069182 + (TC)n Simple_repeat Simple_repeat 2 44 0 245 152 25 38 chr2 27187495 27187574 -226069009 + (CGGG)n Simple_repeat Simple_repeat 2 79 0 207 0 0 0 chr2 27187599 27187622 -226068961 + (CGG)n Simple_repeat Simple_repeat 3 25 0 214 201 10 29 chr2 27188752 27188863 -226067720 + (CA)n Simple_repeat Simple_repeat 1 108 0 * 228 35 0 0 chr2 27188862 27188891 -226067692 + (GA)n Simple_repeat Simple_repeat 2 30 0 532 270 26 7 chr2 27188992 27189144 -226067439 + MIR3 SINE MIR 52 206 -2 195 370 55 62 chr2 27190075 27190100 -226066483 + L2 LINE L2 2941 2965 -307 942 195 0 24 chr2 27190100 27190269 -226066314 - FRAM SINE Alu -1 165 1 195 370 55 62 chr2 27190269 27190535 -226066048 + L2 LINE L2 2965 3230 -42 401 313 17 22 chr2 27191131 27191272 -226065311 - MIR SINE MIR -71 137 16 393 269 172 0 chr2 27191619 27191764 -226064819 - MIR3 SINE MIR -3 205 36 580 273 44 24 chr2 27191825 27192030 -226064553 - MIR SINE MIR 0 262 54 1655 143 0 23 chr2 27192100 27192365 -226064218 + AluSx SINE Alu 2 260 -52 294 348 17 9 chr2 27192878 27192993 -226063590 - MIR3 SINE MIR -90 118 3 621 227 119 70 chr2 27193186 27193433 -226063150 + MIR SINE MIR 4 262 0 440 129 0 0 chr2 27193698 27193760 -226062823 + AluS SINE Alu 1 62 -248 2162 128 0 3 chr2 27193779 27194138 -226062445 + AluSx SINE Alu 1 358 0 257 356 61 8 chr2 27194664 27194796 -226061787 - MIR SINE MIR -77 185 47 284 252 114 41 chr2 27194983 27195106 -226061477 - MIR3 SINE MIR -41 167 36 540 45 0 0 chr2 27195599 27195666 -226060917 + (CAT)n Simple_repeat Simple_repeat 3 69 0 213 65 0 0 chr2 27195667 27195698 -226060885 + (TC)n Simple_repeat Simple_repeat 2 32 0 189 307 23 57 chr2 27195699 27195787 -226060796 + MIR SINE MIR 66 150 -112 496 256 143 36 chr2 27195837 27196005 -226060578 - MER5A DNA MER1_type 0 189 4 273 169 77 0 chr2 27196465 27196530 -226060053 - MLT1A2 LTR MaLR 0 374 305 1899 155 7 0 chr2 27196545 27196848 -226059735 + AluSx SINE Alu 2 306 -6 1136 113 0 39 chr2 27196848 27197041 -226059542 - L1PA13 LINE L1 -11 6152 5966 268 210 16 16 chr2 27197041 27197103 -226059480 - MLT1A2 LTR MaLR -123 242 181 948 318 149 16 chr2 27197228 27197578 -226059005 + L3 LINE CR1 1093 1510 -67 1227 270 28 47 chr2 27197578 27197725 -226058858 - MLT2D LTR ERVL 0 414 266 2140 115 0 3 chr2 27197725 27198020 -226058563 + AluSx SINE Alu 1 294 -18 1227 270 28 47 chr2 27198020 27198294 -226058289 - MLT2D LTR ERVL -148 266 1 948 318 149 16 chr2 27198294 27198367 -226058216 + L3 LINE CR1 1510 1572 -5 181 264 62 85 chr2 27198487 27198616 -226057967 - L2 LINE L2 -1 3312 3187 733 218 0 69 chr2 27199785 27199852 -226056731 - MIR SINE MIR -43 219 149 1770 174 27 0 chr2 27199852 27200150 -226056433 - AluJb SINE Alu -6 306 1 733 218 0 69 chr2 27200150 27200256 -226056327 - MIR SINE MIR -113 149 58 276 385 59 0 chr2 27200283 27200418 -226056165 - MIR SINE MIR -74 188 46 216 343 38 29 chr2 27200856 27200961 -226055622 - MER5B DNA MER1_type -65 113 8 214 268 188 18 chr2 27201747 27201859 -226054724 + MIR3 SINE MIR 66 196 -12 245 274 76 96 chr2 27202669 27202826 -226053757 - MIR3 SINE MIR -48 160 7 1924 251 136 76 chr2 27202858 27203285 -226053298 - L2 LINE L2 -25 3288 2888 2209 95 0 19 chr2 27203285 27203600 -226052983 + AluSq SINE Alu 1 309 -4 1924 251 136 76 chr2 27203600 27204615 -226051968 - L2 LINE L2 -425 2888 1764 185 288 208 0 chr2 27204641 27204766 -226051817 - MIR SINE MIR -92 170 20 202 287 17 96 chr2 27206022 27206137 -226050446 + MIR SINE MIR 30 135 -73 920 182 30 5 chr2 27206462 27206660 -226049923 + MIR SINE MIR 60 262 0 282 369 68 5 chr2 27206994 27207200 -226049383 + L3b LINE CR1 1106 1324 -259 288 0 0 0 chr2 27207559 27207591 -226048992 + (TG)n Simple_repeat Simple_repeat 2 33 0 1829 95 48 41 chr2 27208389 27208684 -226047899 + AluSx SINE Alu 1 297 -15 2206 115 3 3 chr2 27208685 27208998 -226047585 + AluSq SINE Alu 1 313 0 249 369 92 8 chr2 27209133 27209263 -226047320 + MIR3 SINE MIR 3 143 -65 434 296 101 13 chr2 27210216 27210375 -226046208 + MIR SINE MIR 35 207 -55 210 71 0 0 chr2 27210628 27210656 -226045927 + (G)n Simple_repeat Simple_repeat 1 28 0 476 306 0 0 chr2 27210670 27210850 -226045733 + G-rich Low_complexity Low_complexity 1 180 0 284 284 55 28 chr2 27211724 27211833 -226044750 + L2 LINE L2 3202 3313 0 2022 100 76 0 chr2 27212224 27212514 -226044069 + AluSx SINE Alu 1 312 0 2165 117 3 3 chr2 27212873 27213182 -226043401 + AluSq SINE Alu 5 313 0 249 369 92 8 chr2 27213318 27213448 -226043135 + MIR3 SINE MIR 3 143 -65 2212 92 0 0 chr2 27213679 27213992 -226042591 + AluSx SINE Alu 1 313 0 192 267 43 60 chr2 27214018 27214134 -226042449 + MIR SINE MIR 26 139 -123 685 276 56 42 chr2 27214204 27214418 -226042165 + MIR SINE MIR 46 262 0 180 158 298 0 chr2 27214453 27214510 -226042073 - L2 LINE L2 -32 3240 3167 475 259 129 0 chr2 27215047 27215194 -226041389 - MIR3 SINE MIR -9 199 34 326 333 73 30 chr2 27215237 27215402 -226041181 + MIR SINE MIR 41 212 -50 251 308 0 0 chr2 27215574 27215652 -226040931 - L2 LINE L2 -215 3057 2980 333 260 17 157 chr2 27215815 27215963 -226040620 - MIR3 SINE MIR -1 207 102 1097 197 22 31 chr2 27215963 27216186 -226040397 + MER58A DNA MER1_type 4 224 0 333 260 17 157 chr2 27216186 27216272 -226040311 - MIR3 SINE MIR -106 102 6 513 275 0 8 chr2 27216945 27217065 -226039518 - L2 LINE L2 -2 3311 3193 227 243 27 27 chr2 27217100 27217201 -226039382 + C-rich Low_complexity Low_complexity 1 101 0 1030 289 66 40 chr2 27217523 27217689 -226038894 - L1ME4a LINE L1 -4 6117 5957 1786 168 3 0 chr2 27217689 27217980 -226038603 - AluJb SINE Alu -20 292 1 1030 289 66 40 chr2 27217980 27218356 -226038227 - L1ME4a LINE L1 -164 5957 5561 343 240 16 58 chr2 27218477 27218598 -226037985 + L2 LINE L2 2970 3085 -187 515 192 19 0 chr2 27218948 27219052 -226037531 + MIR SINE MIR 44 149 -59 1973 114 29 0 chr2 27219057 27219354 -226037229 + AluSx SINE Alu 5 309 0 233 217 0 0 chr2 27221381 27221427 -226035156 - MIR3 SINE MIR -10 198 153 564 251 112 6 chr2 27221452 27221631 -226034952 - MIR SINE MIR -2 260 63 426 218 123 35 chr2 27221951 27222121 -226034462 - MIR3 SINE MIR -23 185 1 672 326 0 5 chr2 27222644 27222834 -226033749 + MIR3 SINE MIR 16 204 -4 317 292 39 15 chr2 27223506 27223636 -226032947 + MIR SINE MIR 85 217 -45 388 251 13 71 chr2 27224400 27224540 -226032043 - MIR3 SINE MIR -49 159 32 670 262 5 32 chr2 27224984 27225143 -226031440 - MIR SINE MIR 0 262 100 195 42 0 0 chr2 27225143 27225167 -226031416 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 279 0 0 0 chr2 27225166 27225197 -226031386 + (GA)n Simple_repeat Simple_repeat 2 32 0 670 262 5 32 chr2 27225167 27225224 -226031359 - MIR SINE MIR -162 100 81 320 215 43 4 chr2 27225598 27225699 -226030884 - MIR SINE MIR -65 143 73 293 321 142 0 chr2 27226209 27226343 -226030240 - MIR3 SINE MIR -34 174 22 193 340 64 11 chr2 27226424 27226518 -226030065 + MIR SINE MIR 34 132 -130 345 251 66 81 chr2 27228407 27228599 -226027984 - MIR3 SINE MIR -1 261 73 2039 137 3 3 chr2 27228599 27228898 -226027685 + AluJb SINE Alu 1 299 -13 345 251 66 81 chr2 27228898 27228960 -226027623 - MIR3 SINE MIR -189 73 12 1869 111 42 29 chr2 27230345 27230652 -226025931 + AluSx SINE Alu 2 312 0 476 301 22 22 chr2 27230754 27230937 -226025646 - MIR3 SINE MIR -22 186 4 461 230 74 20 chr2 27231305 27231453 -226025130 + MER112 DNA MER1_type 99 254 -6 595 213 27 13 chr2 27232360 27232510 -226024073 - MER103 DNA DNA -1 165 14 343 310 70 29 chr2 27232690 27232861 -226023722 - MIR SINE MIR -84 178 1 2369 96 0 0 chr2 27233023 27233335 -226023248 + AluSx SINE Alu 1 312 0 2106 107 0 0 chr2 27233758 27234068 -226022515 - AluSx SINE Alu 0 311 2 201 39 0 0 chr2 27234100 27234126 -226022457 + (CA)n Simple_repeat Simple_repeat 2 27 0 252 379 57 0 chr2 27234128 27234252 -226022331 - MIR3 SINE MIR -43 165 35 252 0 0 0 chr2 27234254 27234282 -226022301 + (CA)n Simple_repeat Simple_repeat 2 29 0 197 253 0 116 chr2 27234577 27234606 -226021977 - MIR SINE MIR -70 192 161 2258 96 0 0 chr2 27234606 27234928 -226021655 + AluSq SINE Alu 1 322 0 197 253 0 116 chr2 27234928 27234992 -226021591 - MIR SINE MIR -101 161 109 1903 159 0 0 chr2 27235835 27236137 -226020446 - AluSx SINE Alu -10 302 1 274 359 28 9 chr2 27236294 27236400 -226020183 - L3 LINE CR1 -857 720 613 2022 90 76 0 chr2 27236608 27236896 -226019687 + AluSg SINE Alu 1 310 0 544 218 75 14 chr2 27237258 27237405 -226019178 - MIR SINE MIR -73 189 34 2171 88 3 7 chr2 27238303 27238597 -226017986 + AluSq SINE Alu 1 293 -20 748 273 87 55 chr2 27238640 27238944 -226017639 + L1ME1 LINE L1 5682 5975 -359 1883 120 10 7 chr2 27238944 27239236 -226017347 + AluJo SINE Alu 1 293 -19 748 273 87 55 chr2 27239236 27239417 -226017166 + L1ME1 LINE L1 5975 6334 0 222 379 39 0 chr2 27240827 27240930 -226015653 + L2 LINE L2 3157 3263 -9 203 306 91 25 chr2 27242056 27242177 -226014406 - MIR3 SINE MIR -28 180 52 260 250 66 13 chr2 27242422 27242498 -226014085 - MIR3 SINE MIR -20 188 109 269 296 97 0 chr2 27242783 27242910 -226013673 - MIR3 SINE MIR -85 123 13 238 49 49 24 chr2 27243823 27243864 -226012719 - HSMAR1 DNA Mariner 0 1287 1246 219 204 74 0 chr2 27244130 27244184 -226012399 - MIR SINE MIR -57 151 94 223 151 94 0 chr2 27294721 27294774 -225961809 - MIR SINE MIR -112 150 93 2111 114 3 17 chr2 27295048 27295345 -225961238 + AluSx SINE Alu 2 294 -18 659 136 0 10 chr2 27295345 27295448 -225961135 - AluJo/FLAM SINE Alu -194 118 17 203 333 0 13 chr2 27295646 27295721 -225960862 - MIR SINE MIR -86 122 49 487 308 36 41 chr2 27296052 27296086 -225960497 - L1MC4a LINE L1 -1880 5928 5895 1884 174 0 19 chr2 27296086 27296396 -225960187 - AluJo SINE Alu -8 304 1 487 308 36 41 chr2 27296396 27296582 -225960001 - L1MC4a LINE L1 -1913 5895 5709 419 270 85 21 chr2 27296758 27296947 -225959636 - L1MC4a LINE L1 -2184 5624 5424 1182 195 27 14 chr2 27296956 27297177 -225959406 - AluJb SINE Alu -88 224 1 894 203 39 0 chr2 27297182 27297364 -225959219 - AluJo SINE Alu -1 311 123 275 320 46 13 chr2 27297364 27297489 -225959094 - L1MC4a LINE L1 -2395 5413 5281 1976 132 2 103 chr2 27297489 27297852 -225958731 - L1MB8 LINE L1 0 6178 5865 1639 167 29 4 chr2 27297852 27298159 -225958424 + AluSx SINE Alu 1 314 0 1976 132 2 103 chr2 27298159 27298240 -225958343 - L1MB8 LINE L1 -313 5865 5777 275 320 46 13 chr2 27298240 27298267 -225958316 - L1MC4a LINE L1 -2527 5281 5256 305 289 40 62 chr2 27298414 27298524 -225958059 - L1MC4a LINE L1 -1089 5057 4946 2251 95 3 30 chr2 27298524 27298828 -225957755 - AluSx SINE Alu -16 296 1 305 289 40 62 chr2 27298828 27299005 -225957578 - L1MC4a LINE L1 -1200 4946 4769 250 223 77 179 chr2 27299039 27299121 -225957462 - L1MC5 LINE L1 -48 7913 7824 2286 120 3 0 chr2 27299121 27299430 -225957153 + AluSx SINE Alu 1 310 -2 250 223 77 179 chr2 27299430 27299501 -225957082 - L1MC5 LINE L1 -137 7824 7747 6731 113 6 44 chr2 27299501 27300508 -225956075 + LTR5 LTR ERVK 1 969 0 250 223 77 179 chr2 27300508 27300529 -225956054 - L1MC5 LINE L1 -214 7747 7725 1682 163 3 55 chr2 27300529 27300855 -225955728 - AluJb SINE Alu -3 309 1 250 223 77 179 chr2 27300855 27300952 -225955631 - L1MC5 LINE L1 -236 7725 7668 1996 186 116 13 chr2 27300954 27301412 -225955171 + MLT1D LTR MaLR 1 505 0 2031 115 42 7 chr2 27301482 27301768 -225954815 - AluJb SINE Alu -16 296 1 294 231 77 0 chr2 27301917 27302008 -225954575 + MIR3 SINE MIR 62 159 -49 752 169 0 0 chr2 27302136 27302254 -225954329 + FLAM_C SINE Alu 1 118 -15 26 50 0 0 chr2 27302254 27302294 -225954289 + AT_rich Low_complexity Low_complexity 1 40 0 611 207 45 34 chr2 27302520 27302603 -225953980 + MER53 DNA DNA 2 83 -106 2969 113 20 73 chr2 27302603 27302754 -225953829 - LTR26B LTR ERV1 -1 530 372 1767 155 33 7 chr2 27302754 27303057 -225953526 - AluJo SINE Alu -1 311 1 2969 113 20 73 chr2 27303057 27303277 -225953306 - LTR26B LTR ERV1 -159 372 196 1740 156 33 7 chr2 27303277 27303552 -225953031 - AluJb SINE Alu -10 302 21 2969 113 20 73 chr2 27303552 27303739 -225952844 - LTR26B LTR ERV1 -335 196 1 611 207 45 34 chr2 27303739 27303834 -225952749 + MER53 DNA DNA 83 182 -7 2151 140 0 0 chr2 27303906 27304199 -225952384 + AluSx SINE Alu 1 293 -19 1995 136 32 23 chr2 27304284 27304593 -225951990 + AluSx SINE Alu 1 312 0 254 278 59 19 chr2 27305430 27305537 -225951046 - MIR SINE MIR -65 143 51 2411 75 20 0 chr2 27305802 27306094 -225950489 + AluSx SINE Alu 3 300 -12 2885 111 89 81 chr2 27306452 27306682 -225949901 + LTR24C LTR ERV1 1 228 -407 2327 95 3 3 chr2 27306682 27306976 -225949607 - AluSx SINE Alu -18 294 1 2885 111 89 81 chr2 27306976 27307375 -225949208 + LTR24C LTR ERV1 228 635 0 2652 166 73 8 chr2 27307420 27307939 -225948644 - MER41A LTR ERV1 0 554 2 192 264 92 0 chr2 27308136 27308223 -225948360 + L2 LINE L2 2939 3033 -239 196 316 94 8 chr2 27308439 27308556 -225948027 + L2 LINE L2 3182 3308 -5 1488 123 0 0 chr2 27308973 27309168 -225947415 + AluSx SINE Alu 1 195 -117 282 73 0 0 chr2 27309168 27309209 -225947374 + AluSx SINE Alu 254 294 -8 227 300 57 57 chr2 27309304 27309444 -225947139 + L2 LINE L2 2910 3049 -223 1591 177 30 7 chr2 27309609 27309880 -225946703 - AluJo SINE Alu -29 283 7 2115 135 0 7 chr2 27309920 27310216 -225946367 + AluSx SINE Alu 3 296 -16 2253 148 45 5 chr2 27310223 27310642 -225945941 - LTR56 LTR ERV1 -2 443 8 3987 117 29 0 chr2 27310707 27311324 -225945259 + MER41B LTR ERV1 1 635 0 2323 102 6 6 chr2 27311405 27311718 -225944865 - AluSp SINE Alu 0 313 1 1783 193 3 3 chr2 27311718 27312018 -225944565 - AluJb SINE Alu -12 300 1 2061 80 9 49 chr2 27312048 27312327 -225944256 + MER4E LTR ERV1 1 267 -512 2177 83 31 14 chr2 27312327 27312617 -225943966 + AluSg SINE Alu 1 295 -15 2061 80 9 49 chr2 27312617 27312663 -225943920 + MER4E LTR ERV1 267 313 -466 1510 70 74 0 chr2 27312674 27312889 -225943694 + MER4E LTR ERV1 536 766 0 261 339 33 25 chr2 27312996 27313117 -225943466 + MIR SINE MIR 22 143 -65 2390 84 0 13 chr2 27313420 27313731 -225942852 + AluSx SINE Alu 1 307 -5 220 243 129 0 chr2 27314865 27314935 -225941648 - L2 LINE L2 -842 2472 2394 297 54 0 0 chr2 27315124 27315161 -225941422 - AluSp/q SINE Alu -35 268 232 2328 116 0 0 chr2 27315952 27316255 -225940328 + AluSx SINE Alu 1 303 -9 689 289 44 18 chr2 27316337 27316562 -225940021 - MIR SINE MIR -20 242 12 319 302 134 13 chr2 27316606 27316755 -225939828 - MIR3 SINE MIR -21 187 21 706 137 32 8 chr2 27317365 27317489 -225939094 + FLAM_C SINE Alu 1 127 -16 21 0 0 0 chr2 27317489 27317510 -225939073 + AT_rich Low_complexity Low_complexity 1 21 0 312 221 117 0 chr2 27317888 27317965 -225938618 + MIR3 SINE MIR 93 178 -30 2232 88 27 10 chr2 27317996 27318293 -225938290 - AluY SINE Alu -9 302 1 1836 150 49 0 chr2 27318293 27318579 -225938004 - AluJo SINE Alu -12 300 1 1921 170 0 7 chr2 27319759 27320065 -225936518 + AluJb SINE Alu 1 304 -8 2192 145 0 0 chr2 27320072 27320382 -225936201 + AluSx SINE Alu 1 310 -2 27 0 0 0 chr2 27320953 27320980 -225935603 + AT_rich Low_complexity Low_complexity 1 27 0 833 146 0 0 chr2 27321326 27321456 -225935127 + FLAM_A SINE Alu 4 133 0 303 293 57 9 chr2 27322297 27322403 -225934180 + L3 LINE CR1 1182 1292 -285 310 381 19 12 chr2 27322477 27322637 -225933946 + MER117 DNA MER1_type 33 193 -4 1184 221 19 47 chr2 27322745 27322855 -225933728 - Charlie4a DNA MER1_type -1453 508 396 2409 70 7 10 chr2 27322855 27323156 -225933427 + AluY SINE Alu 1 300 -11 1184 221 19 47 chr2 27323156 27323250 -225933333 - Charlie4a DNA MER1_type -1565 396 301 2252 117 3 0 chr2 27323250 27323548 -225933035 - AluSx SINE Alu -13 299 1 1184 221 19 47 chr2 27323548 27323704 -225932879 - Charlie4a DNA MER1_type -1660 301 157 479 296 0 22 chr2 27324309 27324444 -225932139 + MIR3 SINE MIR 30 161 -47 212 244 0 0 chr2 27324624 27324669 -225931914 + MIR3 SINE MIR 157 201 -7 2076 133 7 3 chr2 27326554 27326847 -225929736 + AluSx SINE Alu 1 294 -18 369 227 153 23 chr2 27327276 27327380 -225929203 - MER112 DNA MER1_type -45 215 126 180 0 0 0 chr2 27327380 27327400 -225929183 + (TG)n Simple_repeat Simple_repeat 2 21 0 369 227 153 23 chr2 27327400 27327471 -225929112 - MER112 DNA MER1_type -134 126 17 2238 86 41 10 chr2 27328574 27328865 -225927718 - AluSx SINE Alu -12 300 1 278 369 56 6 chr2 27328914 27329074 -225927509 + MIR3 SINE MIR 39 206 -2 2058 121 44 7 chr2 27329154 27329452 -225927131 - AluSc SINE Alu 0 309 1 1800 138 73 10 chr2 27329452 27329741 -225926842 - AluJo SINE Alu -3 309 3 207 205 0 0 chr2 27329864 27329903 -225926680 - MIR SINE MIR -58 150 112 209 178 0 22 chr2 27330175 27330220 -225926363 - MIR SINE MIR -71 137 94 2614 93 43 24 chr2 27330785 27331205 -225925378 - MSTA LTR MaLR 0 428 1 361 237 200 0 chr2 27331313 27331448 -225925135 - MIR3 SINE MIR -45 163 2 2319 97 7 13 chr2 27331465 27331773 -225924810 + AluSx SINE Alu 1 306 -6 2711 43 0 0 chr2 27331781 27332083 -225924500 + AluY SINE Alu 3 304 -7 584 134 85 12 chr2 27332083 27332229 -225924354 + Tigger3(Golem) DNA MER2_type 2409 2569 -459 1795 186 0 3 chr2 27332229 27332524 -225924059 - AluJo SINE Alu -18 294 1 584 134 85 12 chr2 27332524 27332535 -225924048 + Tigger3(Golem) DNA MER2_type 2569 2578 -450 * 1672 115 35 0 chr2 27332525 27332786 -225923797 + Tigger3(Golem) DNA MER2_type 2747 3016 -13 1275 99 0 5 chr2 27332898 27333100 -225923483 + AluSc SINE Alu 1 299 -10 817 215 0 7 chr2 27333103 27333247 -225923336 + AluJo/FRAM SINE Alu 137 279 -33 189 0 0 0 chr2 27333262 27333283 -225923300 + (TA)n Simple_repeat Simple_repeat 2 22 0 1343 128 84 0 chr2 27333288 27333527 -225923056 - L1MB3 LINE L1 -19 6164 5902 2275 113 0 7 chr2 27333527 27333836 -225922747 - AluY SINE Alu -4 307 1 1098 162 5 44 chr2 27333846 27334050 -225922533 - AluJb SINE Alu -13 299 104 2248 111 10 3 chr2 27334079 27334385 -225922198 - AluSx SINE Alu -3 309 2 649 165 18 0 chr2 27334386 27334495 -225922088 - AluSq/x SINE Alu -197 115 5 2208 148 15 18 chr2 27334500 27334891 -225921692 - L1MB3 LINE L1 -274 5909 5520 233 148 222 37 chr2 27334913 27334994 -225921589 - L1ME4a LINE L1 -2 6119 6024 289 240 39 58 chr2 27336247 27336351 -225920232 - MIR SINE MIR -111 151 50 892 109 0 0 chr2 27336717 27336836 -225919747 - AluJ SINE Alu -188 124 6 2510 55 0 10 chr2 27336843 27337150 -225919433 - AluY SINE Alu -7 304 1 1204 168 56 5 chr2 27337153 27337367 -225919216 - AluJb SINE Alu -3 309 85 380 293 61 14 chr2 27337432 27337579 -225919004 - L1M4 LINE L1 -1836 4310 4157 189 327 0 0 chr2 27337734 27337786 -225918797 + L2 LINE L2 1234 1285 -2029 952 189 5 32 chr2 27337787 27337977 -225918606 - AluJ SINE Alu -16 296 112 279 235 20 39 chr2 27338042 27338144 -225918439 + L2 LINE L2 1290 1389 -1925 2341 103 3 0 chr2 27338298 27338610 -225917973 - AluSp SINE Alu 0 313 1 1957 297 121 37 chr2 27338610 27339645 -225916938 + L2 LINE L2 1681 2805 -509 376 267 38 45 chr2 27339646 27339912 -225916671 - HAL1 LINE L1 -1420 1087 824 2288 106 3 28 chr2 27339940 27340261 -225916322 - AluSq SINE Alu 0 313 1 299 311 76 0 chr2 27340469 27340601 -225915982 + LTR33A LTR ERVL 380 521 -2 370 265 56 38 chr2 27340710 27340997 -225915586 - L1M4 LINE L1 -2980 3166 2875 346 225 171 9 chr2 27341188 27341299 -225915284 + MIR3 SINE MIR 59 187 -21 214 192 26 154 chr2 27341388 27341466 -225915117 - L2 LINE L2 -185 3087 3020 315 186 80 97 chr2 27341488 27341569 -225915014 - L2 LINE L2 0 3313 3233 354 79 270 0 chr2 27341569 27341632 -225914951 + MADE1 DNA Mariner 1 80 0 315 186 80 97 chr2 27341632 27341663 -225914920 - L2 LINE L2 -80 3233 3203 274 213 153 12 chr2 27343190 27343291 -225913292 - FLAM_C SINE Alu -9 124 22 6504 33 12 17 chr2 27344323 27345074 -225911509 - SVA Other Other 0 1386 640 2069 118 24 0 chr2 27345337 27345625 -225910958 - AluSx SINE Alu -17 295 1 29 0 0 0 chr2 27345641 27345670 -225910913 + AT_rich Low_complexity Low_complexity 1 29 0 784 204 0 15 chr2 27345670 27345807 -225910776 - AluJo SINE Alu -176 136 2 1021 147 0 40 chr2 27345811 27345988 -225910595 - AluJo SINE Alu -21 291 122 324 196 38 38 chr2 27345989 27346122 -225910461 - HAL1 LINE L1 -1352 1155 1023 496 86 0 0 chr2 27346436 27346506 -225910077 - Alu SINE Alu -11 299 230 503 254 127 25 chr2 27346690 27346887 -225909696 - MLT1K LTR MaLR -6 582 366 1509 193 56 29 chr2 27346888 27347369 -225909214 + MLT1D LTR MaLR 49 505 0 1289 119 86 8 chr2 27347460 27347703 -225908880 + MER21A LTR ERV1 1 262 -669 2408 125 77 93 chr2 27347711 27347906 -225908677 + MER21A LTR ERV1 377 574 -357 2517 71 13 7 chr2 27347906 27348216 -225908367 - AluSx SINE Alu 0 312 1 2408 125 77 93 chr2 27348216 27348578 -225908005 + MER21A LTR ERV1 574 925 -6 417 38 0 0 chr2 27348651 27348704 -225907879 + MADE1 DNA Mariner 27 79 -1 670 208 208 63 chr2 27348797 27348965 -225907618 - L1ME3A LINE L1 0 6170 6028 2216 85 0 72 chr2 27348965 27349284 -225907299 - AluSq SINE Alu -17 296 1 670 208 208 63 chr2 27349284 27349466 -225907117 - L1ME3A LINE L1 -142 6028 5769 398 123 15 0 chr2 27349477 27349542 -225907041 - MER41B LTR ERV1 -89 546 481 1809 154 0 39 chr2 27349664 27349838 -225906745 - AluJb SINE Alu -12 300 142 2476 96 0 0 chr2 27349838 27350139 -225906444 - AluSc SINE Alu -8 301 1 1809 154 0 39 chr2 27350139 27350276 -225906307 - AluJb SINE Alu -170 142 1 219 125 0 0 chr2 27350348 27350388 -225906195 + (TA)n Simple_repeat Simple_repeat 2 41 0 592 139 20 50 chr2 27350406 27350507 -225906076 + AluJo/FLAM SINE Alu 20 117 -195 837 109 0 0 chr2 27350509 27350645 -225905938 - AluSg/x SINE Alu 0 310 175 23 33 0 0 chr2 27350656 27350686 -225905897 + AT_rich Low_complexity Low_complexity 1 30 0 2407 87 3 0 chr2 27351868 27352166 -225904417 - AluSx SINE Alu -11 301 3 562 149 18 26 chr2 27352180 27352294 -225904289 - MER65A LTR ERV1 -268 177 65 2402 87 7 0 chr2 27352298 27352597 -225903986 - AluSx SINE Alu -7 305 5 2457 86 3 0 chr2 27352682 27352984 -225903599 - AluSp SINE Alu -10 303 1 2348 89 0 35 chr2 27353013 27353327 -225903256 + AluSx SINE Alu 2 304 -8 319 282 27 27 chr2 27353450 27353560 -225903023 + L1MC4 LINE L1 6609 6718 -1324 1993 156 7 0 chr2 27353609 27353911 -225902672 - AluJb SINE Alu -8 304 1 2467 113 47 43 chr2 27353977 27354369 -225902214 - MER65A LTR ERV1 0 445 49 2290 100 13 0 chr2 27354369 27354668 -225901915 - AluSq SINE Alu -10 303 1 2467 113 47 43 chr2 27354668 27354718 -225901865 - MER65A LTR ERV1 -396 49 1 1304 177 52 20 chr2 27354759 27355007 -225901576 - AluJo SINE Alu -36 276 21 2778 72 8 44 chr2 27355176 27355565 -225901018 - THE1C LTR MaLR 0 375 1 750 186 0 0 chr2 27356595 27356713 -225899870 - FLAM_C SINE Alu -15 118 1 31 0 0 0 chr2 27356720 27356751 -225899832 + AT_rich Low_complexity Low_complexity 1 31 0 202 224 0 0 chr2 27356766 27356815 -225899768 + A-rich Low_complexity Low_complexity 1 49 0 333 196 0 0 chr2 27356815 27356871 -225899712 - Alu SINE Alu -13 289 234 1641 191 29 0 chr2 27356930 27357233 -225899350 + AluJb SINE Alu 1 311 0 272 108 0 0 chr2 27357233 27357270 -225899313 - FLAM_A SINE Alu -13 120 84 2080 130 0 46 chr2 27358151 27358475 -225898108 - AluSx SINE Alu -3 309 1 820 142 8 8 chr2 27358491 27358618 -225897965 - FLAM_C SINE Alu -16 127 1 1533 178 7 43 chr2 27358665 27358969 -225897614 - AluJb SINE Alu -19 293 1 1192 225 131 54 chr2 27359110 27359196 -225897387 + MER34B LTR ERV1 1 79 -506 2328 100 0 13 chr2 27359196 27359482 -225897101 + AluSx SINE Alu 1 284 -28 225 0 0 0 chr2 27359482 27359507 -225897076 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 2328 100 0 13 chr2 27359507 27359519 -225897064 + AluSx SINE Alu 284 295 -17 1192 225 131 54 chr2 27359519 27359956 -225896627 + MER34B LTR ERV1 79 585 0 1077 162 0 0 chr2 27360515 27360682 -225895901 - AluJb SINE Alu -6 306 140 450 280 120 13 chr2 27360765 27360990 -225895593 + MIR SINE MIR 11 259 -3 250 289 97 18 chr2 27362340 27362454 -225894129 - MIR SINE MIR -80 182 60 2069 118 0 0 chr2 27362754 27363034 -225893549 - AluSx SINE Alu -7 305 26 1920 78 0 0 chr2 27363678 27363923 -225892660 + AluY SINE Alu 1 245 -66 4155 136 68 30 chr2 27363923 27365184 -225891399 + pTR5 LTR ERV1 743 2399 -39 537 46 0 130 chr2 27365184 27365292 -225891291 + AluYa5/8 SINE Alu 218 311 0 36 23 0 0 chr2 27365392 27365435 -225891148 + GC_rich Low_complexity Low_complexity 1 43 0 2112 98 0 0 chr2 27365708 27365983 -225890600 - AluSx SINE Alu -5 307 33 1077 120 44 0 chr2 27366011 27366169 -225890414 - AluJo SINE Alu -1 301 137 2140 98 0 21 chr2 27367089 27367374 -225889209 - AluSc SINE Alu -30 279 1 357 285 81 12 chr2 27367713 27367885 -225888698 + L1ME LINE L1 5567 5750 -371 410 263 165 46 chr2 27367891 27368286 -225888297 - LTR67 LTR ERVL -6 551 110 2232 91 3 3 chr2 27368985 27369271 -225887312 + AluSg SINE Alu 1 286 -24 804 207 78 5 chr2 27369320 27369537 -225887046 - LTR37A LTR ERV1 -13 413 181 829 144 24 0 chr2 27369711 27369836 -225886747 - AluJo SINE Alu -181 131 4 1817 168 83 13 chr2 27369836 27370234 -225886349 - MLT1C LTR MaLR -39 428 3 2327 92 3 22 chr2 27370246 27370560 -225886023 + AluSc SINE Alu 1 308 -1 2134 159 38 0 chr2 27370564 27370935 -225885648 - MER57A LTR ERV1 -18 385 1 287 190 76 13 chr2 27371059 27371138 -225885445 - MER31-int LTR ERV1 -749 4187 4104 1765 179 0 0 chr2 27371245 27371518 -225885065 - AluJb SINE Alu -37 275 3 346 314 32 54 chr2 27371590 27371775 -225884808 - MER31-int LTR ERV1 -918 4018 3838 2136 126 0 3 chr2 27371848 27372149 -225884434 + AluSx SINE Alu 1 300 -12 912 211 6 0 chr2 27372437 27372612 -225883971 - FRAM SINE Alu -4 172 1 2261 84 11 0 chr2 27372847 27373133 -225883450 + AluY SINE Alu 1 289 -22 1012 196 0 0 chr2 27373144 27373307 -225883276 + AluJb SINE Alu 137 299 -13 2287 113 0 7 chr2 27373312 27373613 -225882970 + AluSx SINE Alu 1 299 -13 1938 146 0 29 chr2 27373615 27373930 -225882653 + AluJo SINE Alu 5 310 -2 27 0 0 0 chr2 27373953 27373980 -225882603 + AT_rich Low_complexity Low_complexity 1 27 0 319 270 7 40 chr2 27374003 27374151 -225882432 - MER31-int LTR ERV1 -2171 2765 2623 2046 135 3 7 chr2 27374314 27374611 -225881972 + AluSx SINE Alu 1 296 -16 1346 189 128 38 chr2 27374846 27375212 -225881371 + Charlie1b DNA MER1_type 6 404 -119 900 137 0 0 chr2 27375247 27375371 -225881212 - FLAM_C SINE Alu -19 124 1 361 163 109 11 chr2 27375382 27375474 -225881109 + Charlie1b DNA MER1_type 423 523 0 2205 117 0 13 chr2 27375496 27375803 -225880780 - AluSg SINE Alu -7 303 1 22 0 0 0 chr2 27376198 27376220 -225880363 + AT_rich Low_complexity Low_complexity 1 22 0 1254 84 0 13 chr2 27376230 27376384 -225880199 - AluSx SINE Alu -155 157 6 547 232 0 0 chr2 27376436 27376548 -225880035 + FRAM SINE Alu 65 176 0 1174 73 0 0 chr2 27377168 27377305 -225879278 - AluSq/x SINE Alu -175 137 1 2263 112 0 10 chr2 27378207 27378503 -225878080 + AluSx SINE Alu 1 293 -19 223 308 132 0 chr2 27378540 27378631 -225877952 + MIR SINE MIR 28 130 -132 753 135 0 0 chr2 27379267 27379378 -225877205 - AluSx SINE Alu -10 302 192 1063 104 0 0 chr2 27379378 27379512 -225877071 - AluSx SINE Alu -173 140 7 386 215 23 73 chr2 27379730 27379907 -225876676 + MER69 DNA AcHobo 2046 2213 -313 251 299 110 7 chr2 27379928 27380082 -225876501 + MLT1L LTR MaLR 369 538 -77 2145 120 7 0 chr2 27380088 27380388 -225876195 + AluSx SINE Alu 4 305 -7 797 246 49 23 chr2 27380548 27380812 -225875771 - L1MCb LINE L1 -5686 359 89 2148 133 3 0 chr2 27380815 27381116 -225875467 - AluSq SINE Alu -11 302 1 202 306 32 51 chr2 27381149 27381306 -225875277 - L2 LINE L2 -286 2986 2833 248 244 0 0 chr2 27381432 27381477 -225875106 - L2 LINE L2 -17 3255 3211 198 0 0 0 chr2 27381488 27381510 -225875073 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 1960 86 0 4 chr2 27381857 27382101 -225874482 - AluSx SINE Alu -56 256 14 8672 191 38 39 chr2 27382142 27382721 -225873862 + L1MC2 LINE L1 2860 3438 -2906 753 178 0 0 chr2 27382721 27382839 -225873744 + FLAM_C SINE Alu 1 118 -15 8672 191 38 39 chr2 27382839 27382896 -225873687 + L1MC2 LINE L1 3438 3494 -2850 1861 176 3 7 chr2 27382896 27383198 -225873385 + AluJb SINE Alu 3 303 -9 8672 191 38 39 chr2 27383198 27383762 -225872821 + L1MC2 LINE L1 3494 4057 -2287 2369 94 0 7 chr2 27383762 27384071 -225872512 + AluSq SINE Alu 1 307 -6 8672 191 38 39 chr2 27384071 27384589 -225871994 + L1MC2 LINE L1 4057 4574 -1770 2195 108 7 0 chr2 27384589 27384886 -225871697 - AluSx SINE Alu -13 299 1 8672 191 38 39 chr2 27384886 27386490 -225870093 + L1MC2 LINE L1 4574 6184 -160 1604 161 0 30 chr2 27386490 27386788 -225869795 + AluJo SINE Alu 1 289 -23 8672 191 38 39 chr2 27386788 27386948 -225869635 + L1MC2 LINE L1 6184 6343 -1 213 283 45 101 chr2 27387089 27387287 -225869296 + L2 LINE L2 3126 3312 -1 2413 116 53 39 chr2 27387789 27388221 -225868362 + MER65A LTR ERV1 1 438 -7 1952 141 0 7 chr2 27388722 27389027 -225867556 - AluSx SINE Alu -9 303 1 228 182 0 0 chr2 27389279 27389323 -225867260 + CT-rich Low_complexity Low_complexity 1 44 0 1175 174 9 22 chr2 27389323 27389553 -225867030 - AluJo SINE Alu 0 312 86 186 233 14 96 chr2 27390270 27390296 -225866287 - MIR SINE MIR -42 220 193 2290 81 10 0 chr2 27390296 27390591 -225865992 - AluSq SINE Alu -14 299 2 186 233 14 96 chr2 27390591 27390637 -225865946 - MIR SINE MIR -69 193 154 380 322 67 34 chr2 27390698 27390937 -225865646 - MIR SINE MIR -1 261 15 577 297 94 5 chr2 27391354 27391556 -225865027 + MIR SINE MIR 3 222 -40 2195 122 0 0 chr2 27391564 27391876 -225864707 - AluSx SINE Alu 0 312 1 540 200 105 0 chr2 27391934 27392039 -225864544 + FLAM_C SINE Alu 1 116 -17 619 115 0 0 chr2 27392065 27392152 -225864431 + AluJ/FRAM SINE Alu 218 304 -8 1876 129 48 0 chr2 27392225 27392520 -225864063 - AluSx SINE Alu -3 309 1 21 0 0 0 chr2 27392547 27392568 -225864015 + AT_rich Low_complexity Low_complexity 1 21 0 183 226 0 57 chr2 27392810 27392863 -225863720 + MIR3 SINE MIR 118 167 -41 983 136 0 7 chr2 27393463 27393646 -225862937 - AluSg/x SINE Alu 0 308 127 2243 89 0 9 chr2 27393654 27393969 -225862614 - AluSx SINE Alu 0 312 1 2141 92 30 0 chr2 27393971 27394266 -225862317 - AluSp SINE Alu -9 304 1 1537 203 3 7 chr2 27394268 27394563 -225862020 - AluJb SINE Alu -18 294 1 495 259 87 40 chr2 27394861 27395100 -225861483 + MIR SINE MIR 1 243 -19 226 137 0 98 chr2 27395646 27395697 -225860886 + Tigger5 DNA MER2_type 1266 1311 -1012 387 343 50 11 chr2 27395697 27395878 -225860705 - MIR SINE MIR -55 207 20 22 0 0 0 chr2 27397581 27397603 -225858980 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 27399664 27399685 -225856898 + GC_rich Low_complexity Low_complexity 1 21 0 368 271 0 66 chr2 27400709 27400831 -225855752 - L1MC4 LINE L1 -1336 6706 6593 2111 94 3 17 chr2 27401427 27401724 -225854859 + AluSx SINE Alu 1 293 -19 428 234 66 36 chr2 27402449 27402485 -225854098 + MIR SINE MIR 121 154 -108 562 113 0 0 chr2 27402485 27402565 -225854018 + MADE1 DNA Mariner 1 80 0 428 234 66 36 chr2 27402565 27402665 -225853918 + MIR SINE MIR 154 261 -1 357 246 184 18 chr2 27403198 27403312 -225853271 - MIR SINE MIR -93 169 37 1178 202 30 11 chr2 27403342 27403604 -225852979 - MLT2C1 LTR ERVL -11 386 120 1176 179 9 5 chr2 27403607 27403825 -225852758 + AluJb SINE Alu 85 303 -9 717 144 17 0 chr2 27403825 27403943 -225852640 - MLT2C1 LTR ERVL -272 125 6 1932 150 6 13 chr2 27403943 27404257 -225852326 + AluSx SINE Alu 1 312 0 2281 97 3 0 chr2 27404573 27404884 -225851699 - AluSx SINE Alu 0 312 1 2122 97 0 3 chr2 27404915 27405205 -225851378 + AluSg SINE Alu 2 290 -20 418 196 147 0 chr2 27405856 27405958 -225850625 - L1ME3A LINE L1 -12 6158 6042 239 188 62 0 chr2 27405958 27406006 -225850577 + MER57A LTR ERV1 295 345 -58 1226 246 131 12 chr2 27406033 27406460 -225850123 - L1ME3A LINE L1 -114 6056 5579 298 61 76 0 chr2 27406652 27406718 -225849865 + (TA)n Simple_repeat Simple_repeat 2 72 0 273 463 0 0 chr2 27406850 27406958 -225849625 + polypyrimidine Low_complexity Low_complexity 1 108 0 25 0 0 0 chr2 27407166 27407191 -225849392 + AT_rich Low_complexity Low_complexity 1 25 0 2077 111 0 10 chr2 27407490 27407796 -225848787 + AluSx SINE Alu 1 303 -9 2467 53 0 0 chr2 27408406 27408706 -225847877 - AluY SINE Alu -11 300 1 1562 157 23 33 chr2 27408809 27409109 -225847474 - AluJo SINE Alu -15 297 1 386 305 88 24 chr2 27409359 27409556 -225847027 - L1MB5 LINE L1 -319 5855 5638 352 253 96 34 chr2 27410224 27410370 -225846213 + MIR SINE MIR 50 204 -58 1066 261 82 61 chr2 27410702 27411142 -225845441 + L1MC4a LINE L1 5572 6020 -101 215 242 177 0 chr2 27411700 27411762 -225844821 - MIR3 SINE MIR -10 198 126 2025 225 140 22 chr2 27411982 27412488 -225844095 + MLT1E LTR MaLR 28 593 0 414 267 8 15 chr2 27412617 27412748 -225843835 + MER94 DNA DNA 3 132 -2 1442 158 3 67 chr2 27413785 27414082 -225842501 - L1MB8 LINE L1 -14 6164 5887 1705 177 0 7 chr2 27414196 27414495 -225842088 + AluJb SINE Alu 1 297 -15 2130 106 23 3 chr2 27415545 27415848 -225840735 - AluSg SINE Alu -1 309 1 439 270 185 40 chr2 27416322 27416543 -225840040 + MIR SINE MIR 5 256 -6 327 290 94 7 chr2 27416566 27416704 -225839879 - HAL1b LINE L1 0 1348 1199 243 0 0 0 chr2 27416705 27416732 -225839851 + (CA)n Simple_repeat Simple_repeat 2 28 0 1029 85 7 0 chr2 27416782 27416935 -225839648 + L1MA4 LINE L1 6140 6293 -7 2344 84 0 7 chr2 27416959 27417267 -225839316 - AluSx SINE Alu -4 308 3 896 279 104 69 chr2 27417583 27417679 -225838904 - L1MB8 LINE L1 -744 5402 5311 2752 10 0 0 chr2 27417679 27417990 -225838593 - AluYa5 SINE Alu 0 311 1 896 279 104 69 chr2 27417990 27419164 -225837419 - L1MB8 LINE L1 -835 5311 4487 1921 153 0 0 chr2 27419200 27419500 -225837083 - AluJb SINE Alu -12 300 1 740 234 47 0 chr2 27419535 27419727 -225836856 - L1MB7 LINE L1 -13 6171 5971 2298 80 0 0 chr2 27419965 27420264 -225836319 + AluY SINE Alu 1 299 -12 380 290 101 42 chr2 27420265 27420809 -225835774 - L1MB8 LINE L1 -1945 4201 3626 841 113 47 33 chr2 27420813 27420963 -225835620 + FRAM SINE Alu 14 165 -11 703 172 94 0 chr2 27421164 27421292 -225835291 - MER3 DNA MER1_type -18 191 52 540 196 155 27 chr2 27421324 27421472 -225835111 + MER58C DNA MER1_type 49 215 0 293 241 46 19 chr2 27421480 27421588 -225834995 + MER113 DNA MER1_type? 1 111 -410 2028 112 7 0 chr2 27421690 27421976 -225834607 - AluSx SINE Alu -24 288 1 1071 208 162 25 chr2 27422006 27422400 -225834183 + MER113 DNA MER1_type? 74 521 0 2176 83 14 0 chr2 27422645 27422934 -225833649 + AluSg SINE Alu 1 293 -17 500 103 26 0 chr2 27422986 27423064 -225833519 + Alu SINE Alu 223 302 -8 708 184 61 114 chr2 27423413 27423641 -225832942 - L1ME1 LINE L1 -6 6160 5945 1111 156 38 0 chr2 27423646 27423832 -225832751 + MER20 DNA MER1_type 27 219 0 624 227 23 8 chr2 27423846 27423978 -225832605 + MER58 DNA MER1_type 3 136 -205 1289 99 0 16 chr2 27423998 27424180 -225832403 - MLT2B2 LTR ERVL -336 179 1 2421 196 94 79 chr2 27424182 27425317 -225831266 - L1ME1 LINE L1 -711 5467 4395 238 402 6 0 chr2 27426584 27426748 -225829835 - L2 LINE L2 -887 2427 2263 2127 106 7 0 chr2 27426748 27427051 -225829532 - AluSq SINE Alu -8 305 1 2294 66 7 3 chr2 27427197 27427501 -225829082 - AluSq SINE Alu -8 305 1 34 42 0 0 chr2 27427510 27427558 -225829025 + AT_rich Low_complexity Low_complexity 1 48 0 692 278 68 34 chr2 27428038 27428854 -225827729 - L1ME4a LINE L1 -223 5898 5023 230 329 45 78 chr2 27429070 27429313 -225827270 + L2 LINE L2 2953 3187 -85 832 131 0 29 chr2 27429580 27429717 -225826866 + FLAM_C SINE Alu 7 139 -4 1908 110 7 11 chr2 27430124 27430427 -225826156 - AluJb SINE Alu 0 302 1 181 303 232 10 chr2 27431074 27431173 -225825410 - L2 LINE L2 -5 3308 3188 276 246 0 15 chr2 27431187 27431252 -225825331 + MIR SINE MIR 118 181 -81 2445 74 0 0 chr2 27432045 27432356 -225824227 + AluY SINE Alu 1 311 0 1562 144 60 21 chr2 27432485 27432649 -225823934 - AluJo SINE Alu -16 296 115 423 38 0 0 chr2 27432649 27432702 -225823881 + (TG)n Simple_repeat Simple_repeat 2 54 0 1562 144 60 21 chr2 27432702 27432821 -225823762 - AluJo SINE Alu -197 115 2 21 0 0 0 chr2 27432823 27432844 -225823739 + AT_rich Low_complexity Low_complexity 1 21 0 2024 103 13 39 chr2 27432854 27433165 -225823418 + AluSx SINE Alu 1 303 -9 354 157 100 129 chr2 27433570 27433622 -225822961 - L1ME3A LINE L1 -224 5946 5894 2056 127 0 0 chr2 27433622 27433934 -225822649 - AluSx SINE Alu 0 312 1 354 157 100 129 chr2 27433934 27434020 -225822563 - L1ME3A LINE L1 -276 5894 5811 315 0 0 0 chr2 27434756 27434791 -225821792 + (CA)n Simple_repeat Simple_repeat 1 35 0 2191 104 3 3 chr2 27435152 27435460 -225821123 + AluSx SINE Alu 1 308 -4 863 45 22 15 chr2 27438399 27438533 -225818050 + (TTTC)n Simple_repeat Simple_repeat 1 135 0 1764 120 0 29 chr2 27438535 27438811 -225817772 - AluSx SINE Alu -44 268 1 1597 174 91 15 chr2 27439042 27439381 -225817202 - MLT1A1 LTR MaLR 0 365 1 2364 61 0 3 chr2 27439508 27439805 -225816778 - AluY SINE Alu -15 296 1 1623 181 43 51 chr2 27440894 27441287 -225815296 - MLT1B LTR MaLR 0 390 1 815 299 17 9 chr2 27441287 27441518 -225815065 + MIR SINE MIR 30 262 0 2040 134 0 0 chr2 27441916 27442208 -225814375 - AluSx SINE Alu -20 292 1 207 352 77 39 chr2 27442340 27442522 -225814061 + MIR SINE MIR 31 219 -43 705 158 71 24 chr2 27442791 27442918 -225813665 + FLAM_A SINE Alu 1 133 0 342 0 0 0 chr2 27442992 27443030 -225813553 + (GA)n Simple_repeat Simple_repeat 1 38 0 205 259 93 0 chr2 27444023 27444077 -225812506 - L2 LINE L2 -214 3058 3000 242 238 8 25 chr2 27444230 27444352 -225812231 + (TTA)n Simple_repeat Simple_repeat 3 122 0 403 245 51 0 chr2 27444664 27444762 -225811821 + MIR SINE MIR 104 206 -56 676 217 59 0 chr2 27445189 27445341 -225811242 - L1M4 LINE L1 -1143 5003 4843 1331 231 54 9 chr2 27445346 27445679 -225810904 - L1M4 LINE L1 -1368 4778 4431 5854 134 33 19 chr2 27445680 27446005 -225810578 - L1MA8 LINE L1 0 6291 5972 2250 104 0 0 chr2 27446005 27446313 -225810270 - AluSg1 SINE Alu -1 308 1 5854 134 33 19 chr2 27446313 27447160 -225809423 - L1MA8 LINE L1 -319 5972 5108 3444 200 45 8 chr2 27447212 27447992 -225808591 - L1M4 LINE L1 -1794 4352 3544 446 287 0 16 chr2 27447995 27448117 -225808466 + MER5B DNA MER1_type 43 162 -16 253 263 72 66 chr2 27449681 27449833 -225806750 + L2 LINE L2 3103 3255 -17 1921 204 161 21 chr2 27450295 27450476 -225806107 - L1ME3A LINE L1 -8 6162 6008 452 144 10 31 chr2 27450476 27450573 -225806010 - L1MB7 LINE L1 0 6184 6090 1921 204 161 21 chr2 27450573 27450951 -225805632 - L1ME3A LINE L1 -162 6008 5525 3900 106 3 25 chr2 27452856 27453298 -225803285 + MER41A LTR ERV1 1 430 -124 1814 126 0 7 chr2 27453298 27453568 -225803015 - AluSg SINE Alu -5 305 38 3900 106 3 25 chr2 27453568 27453691 -225802892 + MER41A LTR ERV1 430 554 0 180 0 0 0 chr2 27453731 27453751 -225802832 + (CAGCC)n Simple_repeat Simple_repeat 4 23 0 268 159 191 0 chr2 27454782 27454845 -225801738 - MIR3 SINE MIR -25 183 109 1986 128 0 3 chr2 27454857 27455155 -225801428 + AluJb SINE Alu 2 298 -14 312 314 0 0 chr2 27455509 27455595 -225800988 + MIR SINE MIR 170 255 -7 2050 199 91 56 chr2 27456007 27456422 -225800161 - MLT1E3 LTR MaLR 0 624 180 2238 88 0 0 chr2 27456422 27456717 -225799866 - AluSc SINE Alu -14 295 1 2050 199 91 56 chr2 27456717 27456904 -225799679 - MLT1E3 LTR MaLR -444 180 1 1693 171 0 20 chr2 27456997 27457302 -225799281 - AluJo SINE Alu -13 299 1 207 0 0 0 chr2 27457336 27457359 -225799224 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2122 104 3 0 chr2 27457361 27457649 -225798934 - AluSx SINE Alu -23 289 1 408 289 228 14 chr2 27458173 27458384 -225798199 + MIR SINE MIR 2 257 -5 26 0 0 0 chr2 27459683 27459709 -225796874 + AT_rich Low_complexity Low_complexity 1 26 0 1832 129 20 27 chr2 27459725 27460019 -225796564 + AluJo SINE Alu 6 297 -15 1848 220 255 16 chr2 27460114 27460829 -225795754 - L1ME1 LINE L1 -12 6154 5272 866 129 8 0 chr2 27460858 27460990 -225795593 - AluSq/x SINE Alu -179 133 1 2428 184 78 24 chr2 27460991 27461578 -225795005 - L1ME1 LINE L1 -864 5282 4664 249 250 150 0 chr2 27462417 27462497 -225794086 - MIR SINE MIR -110 152 61 275 227 84 130 chr2 27463236 27463310 -225793273 + MIR SINE MIR 110 175 -87 2894 130 26 49 chr2 27463310 27463841 -225792742 - L1MB3 LINE L1 -8 6175 5657 275 227 84 130 chr2 27463841 27463920 -225792663 + MIR SINE MIR 175 256 -6 561 143 0 0 chr2 27464473 27464557 -225792026 + AluJ/FLAM SINE Alu 1 84 -228 753 249 15 51 chr2 27464562 27464835 -225791748 - L1ME1 LINE L1 -1639 4507 4245 25 31 0 0 chr2 27466005 27466037 -225790546 + AT_rich Low_complexity Low_complexity 1 32 0 283 257 145 7 chr2 27466243 27466395 -225790188 + L1ME4a LINE L1 5743 5915 -247 32 57 0 0 chr2 27466397 27466450 -225790133 + AT_rich Low_complexity Low_complexity 1 53 0 337 270 44 36 chr2 27466579 27466716 -225789867 + L1ME4a LINE L1 5963 6100 -21 1874 144 3 0 chr2 27466875 27467167 -225789416 + AluSx SINE Alu 1 293 -19 915 44 35 0 chr2 27467613 27467727 -225788856 + AluSq/x SINE Alu 1 118 -195 493 267 147 16 chr2 27468352 27468543 -225788040 + MER115 DNA AcHobo 1 216 -477 28 29 0 0 chr2 27468656 27468691 -225787892 + AT_rich Low_complexity Low_complexity 1 35 0 684 283 40 0 chr2 27469089 27469287 -225787296 + MER115 DNA AcHobo 488 693 0 1029 168 0 0 chr2 27469921 27470082 -225786501 + FRAM SINE Alu 1 161 -5 336 323 85 8 chr2 27470153 27470283 -225786300 - MIR SINE MIR -71 191 52 1943 125 10 0 chr2 27470404 27470692 -225785891 - AluSq SINE Alu -18 295 5 203 167 48 0 chr2 27471208 27471250 -225785333 + (TTATA)n Simple_repeat Simple_repeat 5 48 0 217 211 88 0 chr2 27472549 27472606 -225783977 - L2 LINE L2 0 3313 3252 818 128 21 21 chr2 27472644 27472785 -225783798 + LTR23 LTR ERV1 259 399 -38 236 257 125 29 chr2 27473424 27473560 -225783023 - L1ME LINE L1 -306 5815 5667 1652 139 4 25 chr2 27475274 27475548 -225781035 + AluJb SINE Alu 1 268 -44 264 167 0 0 chr2 27475565 27475613 -225780970 + (CA)n Simple_repeat Simple_repeat 2 49 0 195 42 0 0 chr2 27475613 27475637 -225780946 + (TG)n Simple_repeat Simple_repeat 2 25 0 1770 83 75 136 chr2 27475855 27476080 -225780503 + MER1B DNA MER1_type 1 197 -2515 2192 112 3 0 chr2 27476080 27476392 -225780191 - AluSq SINE Alu 0 313 1 1770 83 75 136 chr2 27476392 27476527 -225780056 + MER1B DNA MER1_type 197 339 0 960 149 17 23 chr2 27477220 27477395 -225779188 + MER20 DNA MER1_type 4 177 -42 1671 133 6 63 chr2 27477403 27477553 -225779030 + AluJo SINE Alu 1 125 -187 2355 74 0 0 chr2 27477553 27477850 -225778733 + AluY SINE Alu 1 297 -14 1671 133 6 63 chr2 27477850 27478014 -225778569 + AluJo SINE Alu 125 297 -15 288 0 0 0 chr2 27478030 27478062 -225778521 + (TG)n Simple_repeat Simple_repeat 1 32 0 265 336 8 22 chr2 27478313 27478447 -225778136 + CT-rich Low_complexity Low_complexity 5 136 0 2167 109 3 3 chr2 27479244 27479556 -225777027 + AluSx SINE Alu 1 312 0 1289 32 0 37 chr2 27479566 27479753 -225776830 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 182 313 52 52 chr2 27480179 27480294 -225776289 - MIR3 SINE MIR -89 119 5 407 277 29 22 chr2 27481918 27482055 -225774528 + MIR3 SINE MIR 37 174 -34 243 252 29 29 chr2 27482673 27482776 -225773807 + CT-rich Low_complexity Low_complexity 3 105 0 2226 98 0 13 chr2 27482923 27483228 -225773355 + AluSx SINE Alu 1 301 -11 2074 106 20 0 chr2 27484187 27484479 -225772104 + AluSq SINE Alu 1 298 -15 28 29 0 0 chr2 27484759 27484794 -225771789 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr2 27484898 27484933 -225771650 + AT_rich Low_complexity Low_complexity 1 35 0 1134 148 21 145 chr2 27485148 27485260 -225771323 - AluSx SINE Alu -6 296 172 342 0 0 0 chr2 27485260 27485298 -225771285 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 1134 148 21 145 chr2 27485298 27485523 -225771060 - AluSx SINE Alu -130 172 1 1925 138 3 7 chr2 27486657 27486953 -225769630 - AluSx SINE Alu -14 298 4 370 300 36 18 chr2 27487351 27487461 -225769122 - MIR SINE MIR -63 145 34 1253 226 50 83 chr2 27487859 27488022 -225768561 - L1ME4a LINE L1 0 6121 5954 662 180 82 0 chr2 27488022 27488144 -225768439 - FLAM_C SINE Alu 0 133 2 1253 226 50 83 chr2 27488144 27488433 -225768150 - L1ME4a LINE L1 -167 5954 5657 216 0 0 0 chr2 27488433 27488457 -225768126 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2162 101 0 14 chr2 27488459 27488755 -225767828 - AluSc SINE Alu -17 292 1 1253 226 50 83 chr2 27488755 27488879 -225767704 - L1ME4a LINE L1 -465 5656 5560 1046 202 32 32 chr2 27489723 27489971 -225766612 - MLT1B LTR MaLR -142 248 1 902 158 7 26 chr2 27490928 27491080 -225765503 - AluJb SINE Alu -163 149 1 635 239 186 5 chr2 27491152 27491340 -225765243 - MIR SINE MIR -24 238 17 2182 98 17 3 chr2 27491528 27491823 -225764760 + AluSg SINE Alu 1 299 -11 311 306 0 0 chr2 27491908 27491980 -225764603 + (CA)n Simple_repeat Simple_repeat 1 72 0 565 250 14 29 chr2 27494167 27494307 -225762276 + MIR SINE MIR 7 144 -118 348 24 0 0 chr2 27495696 27495737 -225760846 + (CA)n Simple_repeat Simple_repeat 1 41 0 2412 73 7 0 chr2 27496198 27496498 -225760085 + AluY SINE Alu 1 302 -9 389 246 82 18 chr2 27496533 27496643 -225759940 - MIR SINE MIR -44 218 102 180 111 0 0 chr2 27497617 27497644 -225758939 + (TG)n Simple_repeat Simple_repeat 2 28 0 2431 84 3 10 chr2 27498589 27498898 -225757685 + AluSp SINE Alu 1 307 -6 461 107 14 8 chr2 27499391 27499607 -225756976 + AluJo SINE Alu 1 298 -14 676 248 0 0 chr2 27499878 27500011 -225756572 - MER94 DNA DNA 0 134 2 2348 97 3 13 chr2 27500549 27500860 -225755723 - AluSg SINE Alu -2 308 1 1935 164 23 0 chr2 27501068 27501373 -225755210 - AluJb SINE Alu 0 312 1 2716 169 44 4 chr2 27501651 27502177 -225754406 - L1MC3 LINE L1 0 7785 7239 2194 128 0 7 chr2 27502362 27502666 -225753917 + AluSx SINE Alu 1 302 -10 234 156 0 0 chr2 27502801 27502846 -225753737 + (CA)n Simple_repeat Simple_repeat 2 46 0 1397 138 75 48 chr2 27502984 27503045 -225753538 - MER1B DNA MER1_type -2437 275 217 1460 119 50 0 chr2 27503045 27503264 -225753319 - MER30 DNA MER1_type 0 230 1 1397 138 75 48 chr2 27503264 27503470 -225753113 - MER1B DNA MER1_type -2495 217 1 912 291 35 95 chr2 27503644 27504246 -225752337 - L3 LINE CR1 -1 1576 1011 445 238 40 0 chr2 27504243 27504344 -225752239 + MIR SINE MIR 21 125 -137 * 282 263 161 106 chr2 27504342 27504578 -225752005 - L2 LINE L2 -5 3267 3019 * 233 297 126 34 chr2 27504594 27504769 -225751814 - L3 LINE CR1 -657 920 730 2381 89 6 16 chr2 27505275 27505591 -225750992 - AluSp SINE Alu 0 313 1 207 265 31 41 chr2 27506217 27506315 -225750268 + GA-rich Low_complexity Low_complexity 4 100 0 344 242 54 7 chr2 27506730 27506879 -225749704 - L1ME4a LINE L1 -1 6120 5965 1531 131 17 0 chr2 27506911 27507147 -225749436 - MER7A DNA MER2_type 0 337 98 800 214 0 14 chr2 27507150 27507295 -225749288 + FRAM SINE Alu 2 144 -32 259 141 31 0 chr2 27507299 27507363 -225749220 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 347 203 0 0 chr2 27507375 27507439 -225749144 + AluJ/FRAM SINE Alu 217 280 -22 560 219 47 0 chr2 27507491 27507619 -225748964 - MER7A DNA MER2_type -214 132 1 387 303 43 6 chr2 27507665 27507827 -225748756 - MLT1J LTR MaLR -2 509 342 762 263 99 28 chr2 27507982 27508305 -225748278 - L1ME4a LINE L1 -276 5845 5500 185 378 71 0 chr2 27509668 27509766 -225746817 - MIR SINE MIR -4 258 154 274 213 15 8 chr2 27509771 27509862 -225746721 - L1P LINE L1 -740 5411 5322 189 194 65 129 chr2 27509896 27509989 -225746594 - MIR SINE MIR -119 143 57 429 141 165 12 chr2 27510359 27510444 -225746139 - AluJo SINE Alu -128 184 87 376 325 24 8 chr2 27510694 27510817 -225745766 + L1ME LINE L1 5341 5465 -656 271 237 252 14 chr2 27510822 27511144 -225745439 + L1ME LINE L1 5484 5879 -242 396 189 151 82 chr2 27511145 27511304 -225745279 + L2 LINE L2 2358 2527 -787 370 335 6 23 chr2 27511505 27511678 -225744905 - MER110-int LTR ERV1 -3328 3473 3304 2606 61 0 0 chr2 27511688 27511999 -225744584 + AluY SINE Alu 1 311 0 1163 243 23 40 chr2 27512114 27512211 -225744372 - MER34B LTR ERV1 -4 561 464 1926 168 0 10 chr2 27512211 27512521 -225744062 - AluJo SINE Alu -5 307 1 1163 243 23 40 chr2 27512521 27512932 -225743651 - MER34B LTR ERV1 -101 464 4 1620 296 73 32 chr2 27512933 27513785 -225742798 - MER110-int LTR ERV1 -3616 3185 151 823 158 8 15 chr2 27514096 27514229 -225742354 + FLAM_A SINE Alu 1 132 -1 1976 193 87 60 chr2 27514541 27515174 -225741409 + L1MD2 LINE L1 5699 6348 -11 225 221 150 44 chr2 27515375 27515488 -225741095 + L2 LINE L2 2736 2860 -454 210 360 67 54 chr2 27515579 27515818 -225740765 + L2 LINE L2 3004 3245 -27 2312 112 0 3 chr2 27516223 27516528 -225740055 - AluSq SINE Alu -7 306 3 250 345 129 6 chr2 27516714 27516885 -225739698 + L2 LINE L2 1848 2039 -1275 23 33 0 0 chr2 27516950 27516980 -225739603 + AT_rich Low_complexity Low_complexity 1 30 0 1700 108 0 0 chr2 27517351 27517564 -225739019 + AluSx SINE Alu 1 213 -99 2560 60 0 0 chr2 27517666 27517965 -225738618 - AluY SINE Alu -11 300 2 213 283 0 0 chr2 27519031 27519084 -225737499 + MER5B DNA MER1_type 3 55 -123 225 256 0 110 chr2 27519781 27519863 -225736720 + L2 LINE L2 3107 3179 -93 184 348 130 9 chr2 27520049 27520164 -225736419 - L2 LINE L2 -5 3308 3180 1708 103 96 11 chr2 27520176 27520472 -225736111 - AluSx SINE Alu 0 321 4 378 213 28 46 chr2 27521271 27521379 -225735204 - MER5A DNA MER1_type -80 109 4 630 274 238 7 chr2 27521601 27522014 -225734569 - Charlie8 DNA MER1_type -2264 153 27 325 329 125 38 chr2 27522041 27522196 -225734387 - L2 LINE L2 -567 2747 2607 1760 162 36 12 chr2 27522196 27522530 -225734053 - MER2 DNA MER2_type 0 344 3 325 329 125 38 chr2 27522530 27522799 -225733784 - L2 LINE L2 -707 2607 2286 415 309 119 32 chr2 27522820 27523349 -225733234 + L2 LINE L2 2696 3267 -5 2084 159 8 17 chr2 27523707 27524058 -225732525 - MER7A DNA MER2_type 0 346 1 537 273 97 31 chr2 27524221 27524448 -225732135 + MIR SINE MIR 21 262 0 248 148 548 0 chr2 27527378 27527493 -225729090 - MIR3 SINE MIR -23 185 8 281 222 185 30 chr2 27529112 27529247 -225727336 - MIR3 SINE MIR -15 193 38 2165 163 36 71 chr2 27529676 27529776 -225726807 + MLT1D LTR MaLR 1 103 -402 2115 128 10 7 chr2 27529776 27530082 -225726501 + AluJb SINE Alu 1 307 -5 2165 163 36 71 chr2 27530082 27530214 -225726369 + MLT1D LTR MaLR 103 238 -267 1977 163 7 0 chr2 27530214 27530509 -225726074 + AluJb SINE Alu 1 297 -15 2165 163 36 71 chr2 27530509 27530798 -225725785 + MLT1D LTR MaLR 238 505 0 376 319 132 14 chr2 27531050 27531194 -225725389 + L2 LINE L2 3112 3272 0 2127 113 115 36 chr2 27531765 27532156 -225724427 - MSTA LTR MaLR -6 422 1 2211 103 10 10 chr2 27532310 27532620 -225723963 - AluSq SINE Alu -1 312 3 1713 129 75 7 chr2 27533124 27533404 -225723179 + AluJb SINE Alu 1 299 -13 1961 97 0 32 chr2 27533656 27533935 -225722648 + AluSx SINE Alu 1 270 -42 24 0 0 0 chr2 27534179 27534203 -225722380 + GC_rich Low_complexity Low_complexity 1 24 0 2010 99 8 0 chr2 27534691 27534954 -225721629 + AluSg SINE Alu 26 290 -20 2206 106 33 0 chr2 27535357 27535659 -225720924 - AluSx SINE Alu 0 312 1 297 293 41 0 chr2 27535698 27535821 -225720762 + L1M4 LINE L1 2716 2843 -3303 334 294 206 52 chr2 27535987 27536746 -225719837 + HAL1 LINE L1 8 897 -1610 1716 165 19 38 chr2 27536746 27537062 -225719521 + AluJb SINE Alu 1 310 -2 334 294 206 52 chr2 27537062 27537102 -225719481 + HAL1 LINE L1 897 930 -1577 1187 226 95 34 chr2 27537136 27537652 -225718931 + HAL1 LINE L1 1140 1756 -751 2272 106 3 7 chr2 27537652 27537954 -225718629 + AluSx SINE Alu 1 301 -11 1187 226 95 34 chr2 27537954 27538077 -225718506 + HAL1 LINE L1 1756 1870 -637 311 335 131 31 chr2 27538246 27538536 -225718047 - L3 LINE CR1 -1 1576 1258 665 200 8 0 chr2 27538588 27538708 -225717875 - MER5A DNA MER1_type -2 187 67 2065 122 0 0 chr2 27538708 27539003 -225717580 - AluSx SINE Alu -17 295 1 218 304 58 0 chr2 27539866 27539935 -225716648 - MIR SINE MIR -6 256 184 716 141 60 54 chr2 27540639 27540676 -225715907 + MER53 DNA DNA 2 37 -152 2379 39 0 0 chr2 27540676 27540993 -225715590 + AluY SINE Alu 1 317 0 716 141 60 54 chr2 27540993 27541136 -225715447 + MER53 DNA DNA 37 186 -3 504 270 79 7 chr2 27541301 27541453 -225715130 + MIR SINE MIR 3 165 -97 2248 84 0 3 chr2 27541454 27541751 -225714832 + AluSx SINE Alu 1 296 -16 1962 94 10 28 chr2 27541867 27542192 -225714391 + AluSx SINE Alu 1 320 0 25 0 0 0 chr2 27542286 27542311 -225714272 + AT_rich Low_complexity Low_complexity 1 25 0 665 187 32 8 chr2 27542311 27542434 -225714149 - FLAM_C SINE Alu -16 127 2 653 296 129 13 chr2 27542456 27542689 -225713894 - MIR SINE MIR 0 262 3 270 266 43 33 chr2 27543001 27543158 -225713425 - MIR SINE MIR -2 260 44 2301 92 0 0 chr2 27543744 27544047 -225712536 + AluSg SINE Alu 1 303 -7 37 69 0 0 chr2 27544505 27544577 -225712006 + AT_rich Low_complexity Low_complexity 1 72 0 899 183 26 26 chr2 27544632 27544804 -225711779 + AluJo SINE Alu 122 296 -16 1746 130 0 4 chr2 27544804 27545065 -225711518 + AluSx SINE Alu 1 260 -52 899 183 26 26 chr2 27545065 27545083 -225711500 + AluJo SINE Alu 295 312 0 475 312 41 0 chr2 27545168 27545338 -225711245 - L2 LINE L2 -558 2756 2580 1768 157 14 0 chr2 27545379 27545673 -225710910 + AluJb SINE Alu 1 298 -14 1718 139 0 37 chr2 27545695 27545989 -225710594 + AluJo SINE Alu 14 296 -16 1970 117 0 0 chr2 27546044 27546348 -225710235 + AluSx SINE Alu 11 314 0 679 210 6 19 chr2 27546348 27546505 -225710078 + L1ME LINE L1 5228 5382 -764 449 222 77 19 chr2 27546550 27546702 -225709881 + MLT1F1 LTR MaLR 433 595 0 345 158 0 0 chr2 27546702 27546759 -225709824 + L1MC4 LINE L1 7938 7994 -48 385 296 99 60 chr2 27547705 27547938 -225708645 - L2 LINE L2 -1 3271 3030 2196 82 3 7 chr2 27548349 27548652 -225707931 + AluSq SINE Alu 1 302 -11 2684 13 0 3 chr2 27552052 27552360 -225704223 - AluYb8 SINE Alu -11 307 1 348 269 65 9 chr2 27552451 27552559 -225704024 - MIR3 SINE MIR -14 194 81 190 219 0 24 chr2 27552626 27552667 -225703916 - MIR SINE MIR -131 77 38 21 0 0 0 chr2 27552848 27552869 -225703714 + AT_rich Low_complexity Low_complexity 1 21 0 715 294 21 5 chr2 27553143 27553330 -225703253 + MIR SINE MIR 23 212 -50 310 203 90 40 chr2 27555322 27555499 -225701084 + L1ME LINE L1 5584 5769 -352 1649 163 7 7 chr2 27557810 27558098 -225698485 + AluJo SINE Alu 6 293 -19 394 246 125 62 chr2 27558867 27559238 -225697345 - L1ME2 LINE L1 -196 5966 5586 436 271 40 99 chr2 27560460 27560611 -225695972 - MER91A DNA MER1_type -54 142 1 270 252 84 17 chr2 27563064 27563183 -225693400 - L1ME4a LINE L1 -53 6068 5942 306 264 38 28 chr2 27563183 27563289 -225693294 - L1ME4a LINE L1 -3 6118 6012 1191 173 239 30 chr2 27564463 27564832 -225691751 + MLT1D LTR MaLR 60 505 0 * 1283 154 35 27 chr2 27564832 27565157 -225691426 - MLT1D LTR MaLR -112 393 24 2362 87 0 3 chr2 27566130 27566442 -225690141 + AluSq SINE Alu 1 311 -2 287 265 154 19 chr2 27567443 27567605 -225688978 + MER5A DNA MER1_type 5 188 -1 199 218 91 18 chr2 27568569 27568624 -225687959 + MIR SINE MIR 2 60 -202 * 269 230 111 87 chr2 27568590 27568672 -225687911 + MER5A DNA MER1_type 61 148 -41 1577 175 24 0 chr2 27568672 27568963 -225687620 + AluJo SINE Alu 1 298 -14 269 230 111 87 chr2 27568963 27569006 -225687577 + MER5A DNA MER1_type 148 189 0 183 317 12 85 chr2 27569072 27569236 -225687347 + L2 LINE L2 2910 3061 -211 21 36 0 0 chr2 27569492 27569520 -225687063 + AT_rich Low_complexity Low_complexity 1 28 0 253 315 67 27 chr2 27569588 27569737 -225686846 + L2 LINE L2 3109 3263 -9 2169 70 14 3 chr2 27569751 27570038 -225686545 + AluY SINE Alu 1 290 -21 297 78 0 39 chr2 27571005 27571056 -225685527 - AluSp/q SINE Alu -6 297 249 24 0 0 0 chr2 27571354 27571378 -225685205 + AT_rich Low_complexity Low_complexity 1 24 0 2099 104 7 3 chr2 27571914 27572213 -225684370 + AluSq SINE Alu 1 300 -13 1212 150 0 54 chr2 27573642 27573882 -225682701 - AluJo SINE Alu -1 311 85 894 152 7 7 chr2 27573882 27574033 -225682550 - MER58B DNA MER1_type -10 331 181 1475 184 15 31 chr2 27574184 27574510 -225682073 + L1MC4 LINE L1 6794 7114 -928 537 16 0 0 chr2 27574607 27574669 -225681914 + (TG)n Simple_repeat Simple_repeat 2 63 0 1597 161 3 14 chr2 27574942 27575282 -225681301 - AluJo SINE Alu 0 337 1 1726 74 56 63 chr2 27575347 27575662 -225680921 + AluY SINE Alu 1 313 0 233 310 0 0 chr2 27575996 27576054 -225680529 + MIR SINE MIR 183 240 -22 982 184 0 76 chr2 27576093 27576161 -225680422 + MER45A DNA AcHobo 6 78 -1503 2202 104 3 3 chr2 27576161 27576470 -225680113 - AluSx SINE Alu -3 309 1 982 184 0 76 chr2 27576470 27576586 -225679997 + MER45A DNA AcHobo 78 176 -2 941 258 41 12 chr2 27577104 27577348 -225679235 + MIR SINE MIR 2 252 -10 210 283 43 33 chr2 27577968 27578060 -225678523 - L2 LINE L2 -545 2769 2677 298 164 164 0 chr2 27578358 27578419 -225678164 - MIR SINE MIR -74 188 118 191 170 64 85 chr2 27578888 27578935 -225677648 + MER5A DNA MER1_type 31 76 -113 205 344 11 11 chr2 27578958 27579048 -225677535 + MIR SINE MIR 11 100 -162 269 312 233 6 chr2 27579049 27579405 -225677178 - L2 LINE L2 -870 2444 2008 275 227 84 130 chr2 27580636 27580715 -225675868 - MIR SINE MIR -6 256 186 2894 130 26 49 chr2 27580715 27581246 -225675337 + L1MB3 LINE L1 5657 6175 -8 275 227 84 130 chr2 27581246 27581320 -225675263 - MIR SINE MIR -76 186 110 249 250 150 0 chr2 27582059 27582139 -225674444 + MIR SINE MIR 61 152 -110 2422 184 78 25 chr2 27582978 27583566 -225673017 + L1ME1 LINE L1 4664 5282 -864 866 129 8 0 chr2 27583567 27583699 -225672884 + AluSq/x SINE Alu 1 133 -179 709 219 69 19 chr2 27583728 27584443 -225672140 + L1ME1 LINE L1 5272 6154 -12 1832 129 20 27 chr2 27584538 27584832 -225671751 - AluJo SINE Alu -15 297 6 26 0 0 0 chr2 27584848 27584874 -225671709 + AT_rich Low_complexity Low_complexity 1 26 0 408 289 228 14 chr2 27586173 27586384 -225670199 - MIR SINE MIR -5 257 2 2222 113 3 0 chr2 27586908 27587219 -225669364 + AluSx SINE Alu 1 312 0 206 343 49 35 chr2 27587322 27587465 -225669118 + MIR SINE MIR 8 152 -110 198 0 0 0 chr2 27588544 27588566 -225668017 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 236 349 67 0 chr2 27588880 27589029 -225667554 - MIR SINE MIR -69 193 35 681 321 80 0 chr2 27590214 27590438 -225666145 - MIR SINE MIR -9 253 12 2089 86 65 0 chr2 27591488 27591778 -225664805 - AluSx SINE Alu -3 309 1 447 234 0 18 chr2 27593103 27593214 -225663369 - MIR SINE MIR -89 173 65 275 344 38 0 chr2 27596292 27596423 -225660160 - MIR SINE MIR -111 151 16 1371 146 15 131 chr2 27600405 27600741 -225655842 - AluJo SINE Alu -5 297 1 2247 93 0 3 chr2 27601113 27601413 -225655170 - AluSq SINE Alu -14 299 1 5191 149 60 30 chr2 27601415 27601856 -225654727 - L1MC2 LINE L1 -13 6331 5905 2206 115 0 0 chr2 27601856 27602161 -225654422 - AluSx SINE Alu -7 305 1 5191 149 60 30 chr2 27602161 27602716 -225653867 - L1MC2 LINE L1 -439 5905 5294 1378 178 85 24 chr2 27602716 27603009 -225653574 - AluJo SINE Alu -1 311 1 5191 149 60 30 chr2 27603009 27603103 -225653480 - L1MC2 LINE L1 -1050 5294 5204 2263 96 0 0 chr2 27603315 27603616 -225652967 - AluY SINE Alu -10 301 1 1702 132 64 10 chr2 27603693 27603988 -225652595 - AluSx SINE Alu -1 311 1 1801 164 0 7 chr2 27603988 27604292 -225652291 - AluJb SINE Alu -8 304 3 2831 206 24 72 chr2 27604300 27604831 -225651752 - L1 LINE L1 -1773 4373 3903 2207 93 23 0 chr2 27604831 27605131 -225651452 - AluSx SINE Alu -5 307 1 2831 206 24 72 chr2 27605131 27605516 -225651067 - L1 LINE L1 -2243 3903 3501 2163 92 10 0 chr2 27605516 27605819 -225650764 - AluSx SINE Alu -6 306 1 842 110 12 61 chr2 27605819 27605982 -225650601 - AluSg/x SINE Alu -22 290 136 1990 87 30 10 chr2 27605984 27606283 -225650300 - AluSq SINE Alu -8 305 1 182 261 15 31 chr2 27606471 27606536 -225650047 - MIR SINE MIR -111 97 34 555 11 0 178 chr2 27607667 27607757 -225648826 + tRNA-Tyr-TAC tRNA tRNA 1 74 -2 555 55 14 0 chr2 27608100 27608173 -225648410 + tRNA-Ala-GCA tRNA tRNA 1 74 -2 208 143 48 63 chr2 27608709 27608772 -225647811 + (CCCCAG)n Simple_repeat Simple_repeat 3 64 0 1301 89 0 0 chr2 27612472 27612641 -225643942 + AluSp SINE Alu 135 303 -10 1918 102 4 8 chr2 27613418 27613682 -225642901 + AluSx SINE Alu 1 263 -49 2099 131 0 0 chr2 27615457 27615755 -225640828 + AluSx SINE Alu 1 298 -14 270 333 121 6 chr2 27616408 27616573 -225640010 - MIR SINE MIR 0 262 79 2028 137 3 13 chr2 27616641 27616821 -225639762 - AluSx SINE Alu 0 312 135 2339 82 3 0 chr2 27616821 27617124 -225639459 - AluSg SINE Alu -6 304 1 2028 137 3 13 chr2 27617124 27617258 -225639325 - AluSx SINE Alu -177 135 1 2022 125 7 7 chr2 27617404 27617701 -225638882 - AluSq SINE Alu -12 301 5 2246 92 3 10 chr2 27617710 27618016 -225638567 - AluSp SINE Alu -9 304 1 283 296 0 0 chr2 27618794 27618865 -225637718 + L2 LINE L2 3242 3312 -1 2434 53 0 10 chr2 27618901 27619203 -225637380 + AluY SINE Alu 1 299 -12 1678 137 50 20 chr2 27619879 27620178 -225636405 - AluJb SINE Alu -3 309 2 2183 83 13 3 chr2 27620343 27620644 -225635939 - AluSx SINE Alu -8 304 1 234 330 43 26 chr2 27621067 27621182 -225635401 - L2 LINE L2 -15 3257 3141 251 232 244 0 chr2 27621182 27621264 -225635319 - MIR SINE MIR -1 261 160 1628 148 94 0 chr2 27621568 27621845 -225634738 + AluJb SINE Alu 1 303 -9 1762 139 16 29 chr2 27622253 27622389 -225634194 + AluJb SINE Alu 1 137 -175 2182 92 3 13 chr2 27622389 27622693 -225633890 + AluSg SINE Alu 1 301 -9 1762 139 16 29 chr2 27622693 27622865 -225633718 + AluJb SINE Alu 137 305 -7 302 208 125 0 chr2 27623411 27623483 -225633100 - MIR SINE MIR 0 262 182 1094 179 14 19 chr2 27623944 27624156 -225632427 + MER20 DNA MER1_type 9 219 0 289 270 147 37 chr2 27628901 27628965 -225627618 - MIR3 SINE MIR -4 204 148 2118 119 20 0 chr2 27628965 27629267 -225627316 + AluSx SINE Alu 1 308 -4 289 270 147 37 chr2 27629267 27629365 -225627218 - MIR3 SINE MIR -60 148 24 2191 107 3 0 chr2 27629955 27630254 -225626329 - AluSx SINE Alu -12 300 1 206 178 0 44 chr2 27630558 27630603 -225625980 + (CCA)n Simple_repeat Simple_repeat 3 45 0 938 108 20 7 chr2 27631195 27631207 -225625376 - AluSq/x SINE Alu -163 150 140 1923 128 14 0 chr2 27631207 27631497 -225625086 - AluSx SINE Alu -18 294 1 938 108 20 7 chr2 27631497 27631632 -225624951 - AluSq/x SINE Alu -173 140 1 202 288 27 27 chr2 27631822 27631933 -225624650 + L2 LINE L2 2305 2415 -899 623 239 42 7 chr2 27632350 27632492 -225624091 - MIR SINE MIR 0 262 116 2296 90 0 0 chr2 27633245 27633545 -225623038 - AluSg SINE Alu -10 300 1 461 304 8 0 chr2 27633679 27633804 -225622779 + MIR3 SINE MIR 60 185 -23 241 200 0 67 chr2 27634409 27634484 -225622099 + GA-rich Low_complexity Low_complexity 5 74 0 426 53 0 0 chr2 27636698 27636755 -225619828 + (TG)n Simple_repeat Simple_repeat 1 57 0 209 284 81 0 chr2 27637223 27637297 -225619286 - MIR SINE MIR -80 182 103 397 317 19 37 chr2 27637317 27637478 -225619105 + MIR SINE MIR 20 177 -85 186 43 0 0 chr2 27637986 27638009 -225618574 + (CCCCAG)n Simple_repeat Simple_repeat 6 28 0 485 214 95 8 chr2 27641056 27641182 -225615401 - L2 LINE L2 0 3272 3136 279 0 0 0 chr2 27642310 27642341 -225614242 + (CGGGG)n Simple_repeat Simple_repeat 5 35 0 234 271 86 0 chr2 27643212 27643282 -225613301 - MIR SINE MIR -109 153 78 249 33 0 0 chr2 27643685 27643715 -225612868 + (T)n Simple_repeat Simple_repeat 1 30 0 312 217 0 33 chr2 27643825 27643917 -225612666 - AluY SINE Alu -212 89 1 625 260 58 42 chr2 27644036 27644451 -225612132 + MLT1F1 LTR MaLR 1 418 -172 717 194 8 15 chr2 27644524 27644658 -225611925 - FLAM_C SINE Alu -10 133 1 270 186 17 0 chr2 27644660 27644719 -225611864 + MLT1F1 LTR MaLR 534 593 -2 740 181 188 0 chr2 27644732 27644881 -225611702 + MER45A DNA AcHobo 2 178 0 498 301 47 10 chr2 27644951 27645144 -225611439 + MIR SINE MIR 2 201 -61 229 376 93 28 chr2 27645142 27645496 -225611087 + L2 LINE L2 2595 2971 -343 * 1512 172 20 50 chr2 27645555 27645852 -225610731 + AluJo SINE Alu 1 288 -14 2304 78 14 0 chr2 27647112 27647407 -225609176 + AluSp SINE Alu 1 299 -14 2269 96 0 3 chr2 27647871 27648173 -225608410 + AluSx SINE Alu 1 301 -11 637 307 42 25 chr2 27648215 27648453 -225608130 + MIR SINE MIR 11 252 -10 261 303 26 0 chr2 27648493 27648569 -225608014 + MIR SINE MIR 64 141 -121 2187 73 0 43 chr2 27649072 27649373 -225607210 + AluY SINE Alu 1 288 -23 243 0 0 0 chr2 27649489 27649516 -225607067 + (T)n Simple_repeat Simple_repeat 1 27 0 2373 45 10 0 chr2 27649527 27649817 -225606766 + AluY SINE Alu 2 294 -17 526 309 127 72 chr2 27649936 27650107 -225606476 + L1ME LINE L1 2039 2199 -4016 1388 164 15 134 chr2 27650107 27650436 -225606147 + AluJb SINE Alu 1 290 -12 526 309 127 72 chr2 27650436 27650661 -225605922 + L1ME LINE L1 2199 3481 -2734 2850 109 113 107 chr2 27650718 27652042 -225604541 - pTR5 LTR ERV1 0 2438 743 1697 153 3 24 chr2 27652042 27652329 -225604254 + AluJo SINE Alu 31 311 -1 265 277 42 8 chr2 27652392 27652511 -225604072 + L1ME LINE L1 3442 3564 -2651 232 325 106 15 chr2 27652520 27652785 -225603798 + L1ME LINE L1 5600 5888 -302 192 283 0 0 chr2 27653417 27653470 -225603113 - L2 LINE L2 -4 3309 3257 561 309 133 19 chr2 27653595 27653805 -225602778 + MIR SINE MIR 4 237 -25 1667 59 5 0 chr2 27654015 27654219 -225602364 - AluSc SINE Alu -7 302 98 1759 172 10 3 chr2 27654319 27654616 -225601967 - AluJo SINE Alu -13 299 1 1890 140 3 35 chr2 27654618 27654932 -225601651 - AluSx SINE Alu -8 304 1 274 325 62 72 chr2 27655205 27655399 -225601184 - MIR SINE MIR -50 212 21 2284 88 3 0 chr2 27656062 27656359 -225600224 - AluSp SINE Alu -15 298 1 2357 97 0 0 chr2 27656650 27656960 -225599623 - AluSg SINE Alu 0 310 1 1786 172 7 7 chr2 27656979 27657276 -225599307 + AluJo SINE Alu 1 297 -15 1583 170 21 28 chr2 27657308 27657596 -225598987 - AluJb SINE Alu -26 286 1 201 291 58 39 chr2 27658363 27658466 -225598117 + MIR3 SINE MIR 91 195 -13 204 326 76 11 chr2 27659108 27659200 -225597383 - MIR SINE MIR -83 125 28 251 224 0 0 chr2 27659661 27659710 -225596873 - L2 LINE L2 -3 3310 3262 363 168 7 168 chr2 27663094 27663231 -225593352 - MIR3 SINE MIR -32 176 62 269 319 76 60 chr2 27663399 27663584 -225592999 + MIR3 SINE MIR 19 206 -2 258 231 51 39 chr2 27664155 27664233 -225592350 + MIR3 SINE MIR 106 184 -24 188 111 0 0 chr2 27664406 27664433 -225592150 + MER5B DNA MER1_type 6 32 -146 1021 219 27 9 chr2 27664445 27664664 -225591919 + AluJo SINE Alu 1 223 -89 488 144 18 90 chr2 27664665 27664776 -225591807 + AluJo SINE Alu 105 207 -105 639 189 76 8 chr2 27665122 27665254 -225591329 + FLAM_C SINE Alu 1 141 -2 528 299 86 23 chr2 27666776 27666997 -225589586 + MIR SINE MIR 28 262 0 1239 92 6 0 chr2 27669583 27669746 -225586837 - AluSg/x SINE Alu -17 293 130 207 100 0 0 chr2 27670081 27670111 -225586472 + (A)n Simple_repeat Simple_repeat 1 30 0 2198 92 0 0 chr2 27670349 27670653 -225585930 + AluSg SINE Alu 1 304 0 188 265 82 0 chr2 27670737 27670786 -225585797 - L2 LINE L2 -9 3263 3211 2319 98 0 0 chr2 27672185 27672491 -225584092 - AluSx SINE Alu -6 306 1 583 314 84 52 chr2 27672586 27673253 -225583330 + L1MEd LINE L1 1 515 -5604 2033 120 0 19 chr2 27673253 27673562 -225583021 - AluSx SINE Alu -9 303 1 583 314 84 52 chr2 27673562 27673886 -225582697 + L1MEd LINE L1 515 827 -5292 2169 115 0 0 chr2 27673895 27674199 -225582384 - AluSx SINE Alu -8 304 1 495 0 0 0 chr2 27674202 27674257 -225582326 + (TC)n Simple_repeat Simple_repeat 2 56 0 2026 127 7 0 chr2 27674257 27674541 -225582042 - AluSx SINE Alu -26 286 1 467 246 109 62 chr2 27674931 27675036 -225581547 + MIR SINE MIR 21 120 -142 2333 58 0 32 chr2 27675036 27675348 -225581235 - AluY SINE Alu -9 302 1 467 246 109 62 chr2 27675348 27675453 -225581130 + MIR SINE MIR 120 241 -21 519 293 91 16 chr2 27675461 27675703 -225580880 - L3 LINE CR1 -6 1571 1312 21 71 0 0 chr2 27676397 27676439 -225580144 + GC_rich Low_complexity Low_complexity 1 42 0 210 271 0 0 chr2 27676440 27676536 -225580047 + (CGTG)n Simple_repeat Simple_repeat 4 99 0 282 337 0 0 chr2 27676551 27676646 -225579937 + (TG)n Simple_repeat Simple_repeat 2 96 0 2148 73 0 24 chr2 27676886 27677204 -225579379 + AluY SINE Alu 1 311 0 2180 183 5 20 chr2 27677569 27677783 -225578800 + MLT1C LTR MaLR 1 217 -250 1659 161 45 87 chr2 27677783 27677857 -225578726 + MLT1A1 LTR MaLR 1 77 -288 1831 147 13 20 chr2 27677857 27678157 -225578426 + AluJo SINE Alu 1 298 -14 1659 161 45 87 chr2 27678157 27678461 -225578122 + MLT1A1 LTR MaLR 77 363 -2 2180 183 5 20 chr2 27678461 27678667 -225577916 + MLT1C LTR MaLR 217 414 -53 356 115 0 0 chr2 27678667 27678719 -225577864 - MER1B DNA MER1_type -3 326 275 888 104 7 22 chr2 27678743 27678878 -225577705 - AluSq/x SINE Alu -179 133 1 1506 129 73 35 chr2 27678883 27679169 -225577414 - MER1B DNA MER1_type -42 297 1 251 185 37 0 chr2 27679169 27679223 -225577360 + MLT1C LTR MaLR 412 467 0 982 245 109 19 chr2 27679302 27679677 -225576906 - MER74B LTR ERVL -5 617 209 310 151 0 0 chr2 27679710 27679763 -225576820 - MER74B LTR ERVL -569 53 1 690 294 233 9 chr2 27679781 27680308 -225576275 + L2 LINE L2 2327 2971 -343 489 272 96 7 chr2 27680393 27680529 -225576054 - MER5B DNA MER1_type -29 149 2 322 308 83 79 chr2 27681270 27681351 -225575232 - L1MDa LINE L1 -3949 2477 2398 2082 118 0 3 chr2 27681351 27681647 -225574936 + AluSx SINE Alu 1 295 -17 322 308 83 79 chr2 27681647 27681879 -225574704 - L1MDa LINE L1 -4028 2398 928 1734 100 0 0 chr2 27682314 27682545 -225574038 - AluSc SINE Alu -78 231 1 968 127 14 0 chr2 27682656 27682798 -225573785 - FRAM SINE Alu -32 144 1 272 184 58 68 chr2 27688537 27688640 -225567943 - MIR SINE MIR -70 192 91 22 0 0 0 chr2 27689481 27689503 -225567080 + GC_rich Low_complexity Low_complexity 1 22 0 1876 61 65 47 chr2 27689556 27689834 -225566749 + AluSp SINE Alu 14 296 -17 1268 161 27 65 chr2 27689840 27690132 -225566451 + AluJb SINE Alu 2 282 -30 203 118 59 0 chr2 27690219 27690253 -225566330 - MIR SINE MIR -90 118 83 2219 110 0 3 chr2 27690845 27691138 -225565445 - AluSx SINE Alu -17 295 6 1908 143 17 24 chr2 27691146 27691440 -225565143 - AluJo SINE Alu -10 302 11 244 261 0 78 chr2 27692565 27692707 -225563876 + G-rich Low_complexity Low_complexity 5 135 0 210 261 14 29 chr2 27693519 27693588 -225562995 + GA-rich Low_complexity Low_complexity 4 71 0 4363 166 27 1 chr2 27694446 27694862 -225561721 - L1MB7 LINE L1 -9 6175 5771 2346 119 0 0 chr2 27694862 27695172 -225561411 - AluSx SINE Alu -1 311 2 4363 166 27 1 chr2 27695172 27695594 -225560989 - L1MB7 LINE L1 -413 5771 5315 340 83 0 0 chr2 27695594 27695642 -225560941 - HY4 scRNA scRNA 0 93 46 2428 64 0 27 chr2 27695643 27695940 -225560643 - AluSg SINE Alu -21 289 1 2094 156 0 6 chr2 27695956 27696270 -225560313 - AluJb SINE Alu 0 312 1 1071 94 0 0 chr2 27696288 27696426 -225560157 - AluSg/x SINE Alu -11 299 162 3385 75 30 136 chr2 27696426 27696494 -225560089 + MER4A LTR ERV1 65 139 -525 2195 107 0 23 chr2 27696494 27696794 -225559789 + AluSx SINE Alu 1 293 -19 3385 75 30 136 chr2 27696794 27697116 -225559467 + MER4A LTR ERV1 139 357 -307 1723 158 54 0 chr2 27697116 27697394 -225559189 + AluJb SINE Alu 1 293 -19 3385 75 30 136 chr2 27697394 27697672 -225558911 + MER4A LTR ERV1 357 663 -1 4749 210 36 41 chr2 27697678 27698025 -225558558 - L1M4 LINE L1 -2154 3992 3645 1745 215 31 49 chr2 27698025 27698476 -225558107 + LTR47B LTR ERVL 1 443 0 4749 210 36 41 chr2 27698476 27698920 -225557663 - L1M4 LINE L1 -2501 3645 3200 2376 98 0 0 chr2 27698920 27699252 -225557331 - AluSq SINE Alu 0 313 1 4749 210 36 41 chr2 27699252 27699397 -225557186 - L1M4 LINE L1 -2946 3200 3056 2404 92 0 16 chr2 27699397 27699714 -225556869 - AluSq SINE Alu -1 312 1 4749 210 36 41 chr2 27699714 27700009 -225556574 - L1M4 LINE L1 -3090 3056 2764 2379 89 3 0 chr2 27700009 27700311 -225556272 - AluSp SINE Alu -4 309 7 4749 210 36 41 chr2 27700311 27700502 -225556081 - L1M4 LINE L1 -3382 2764 2574 914 157 0 44 chr2 27700527 27700686 -225555897 - FRAM SINE Alu -28 148 1 1901 177 29 26 chr2 27700756 27701140 -225555443 - MLT1F LTR MaLR -3 539 155 748 198 108 0 chr2 27701141 27701298 -225555285 - FAM SINE Alu 0 175 2 2348 95 7 0 chr2 27701311 27701617 -225554966 - AluSq SINE Alu -5 308 1 452 285 47 24 chr2 27701672 27701899 -225554684 - L1ME4a LINE L1 -187 5934 5729 314 89 0 36 chr2 27701915 27701955 -225554628 + (TTCC)n Simple_repeat Simple_repeat 3 42 -14 2232 99 0 7 chr2 27701955 27702248 -225554335 - AluY SINE Alu -20 291 1 314 89 0 36 chr2 27702248 27702263 -225554320 + (TTCC)n Simple_repeat Simple_repeat 42 56 0 2418 69 13 7 chr2 27702271 27702577 -225554006 - AluSc SINE Alu -1 308 1 201 291 139 12 chr2 27702821 27702888 -225553695 - L2 LINE L2 -89 3183 3106 537 291 128 18 chr2 27702888 27703115 -225553468 + MIR SINE MIR 2 253 -9 369 286 16 32 chr2 27704264 27704390 -225552193 - MIR3 SINE MIR -76 132 9 261 244 215 30 chr2 27704532 27704667 -225551916 + MIR3 SINE MIR 3 162 -46 439 249 259 10 chr2 27705683 27705884 -225550699 - MIR SINE MIR 0 262 12 28 0 0 0 chr2 27705990 27706018 -225550565 + AT_rich Low_complexity Low_complexity 1 28 0 2212 113 3 0 chr2 27706024 27706315 -225550268 - AluSx SINE Alu -20 292 1 1307 165 24 20 chr2 27706316 27706570 -225550013 - AluJo SINE Alu -9 303 49 341 21 0 21 chr2 27708186 27708233 -225548350 + (TTTTC)n Simple_repeat Simple_repeat 2 47 0 867 124 0 8 chr2 27708235 27708356 -225548227 - FLAM_C SINE Alu -23 120 1 2340 112 0 6 chr2 27710140 27710452 -225546131 + AluSg SINE Alu 1 310 0 1145 112 28 17 chr2 27710724 27710902 -225545681 + AluSx SINE Alu 1 180 -132 2507 55 0 29 chr2 27711073 27711383 -225545200 - AluY SINE Alu -10 301 1 1057 207 58 0 chr2 27711591 27711799 -225544784 + MER58A DNA MER1_type 5 224 0 351 233 23 0 chr2 27711807 27711893 -225544690 + Charlie1b DNA MER1_type 1 88 -435 1856 161 17 0 chr2 27711905 27712197 -225544386 + AluSx SINE Alu 1 297 -15 2198 126 3 7 chr2 27712200 27712509 -225544074 + AluSx SINE Alu 5 312 0 762 183 12 67 chr2 27712509 27712696 -225543887 + AluJb SINE Alu 134 312 0 1574 160 52 30 chr2 27712706 27713106 -225543477 + Charlie1b DNA MER1_type 110 518 -5 2695 115 0 0 chr2 27714852 27715227 -225541356 - THE1C LTR MaLR 0 375 1 2233 99 10 13 chr2 27715311 27715481 -225541102 - AluSq SINE Alu -10 303 133 1882 123 51 27 chr2 27715481 27715774 -225540809 - AluSq SINE Alu -13 300 1 2233 99 10 13 chr2 27715774 27715907 -225540676 - AluSq SINE Alu -180 133 1 693 163 37 52 chr2 27715920 27716055 -225540528 - FLAM_A SINE Alu 0 133 1 1917 146 3 22 chr2 27716496 27716812 -225539771 - AluJb SINE Alu -2 310 1 778 57 9 9 chr2 27716842 27716948 -225539635 - LTR23 LTR ERV1 -12 425 320 392 206 21 10 chr2 27716932 27717029 -225539554 + LTR23 LTR ERV1 340 437 0 * 492 306 70 55 chr2 27717414 27717757 -225538826 + MER4B-int LTR ERV1 346 693 -6065 3233 76 9 38 chr2 27717804 27717903 -225538680 + MER57B LTR ERV1 2 102 -332 2247 124 0 0 chr2 27717903 27718194 -225538389 + AluSx SINE Alu 8 298 -14 3233 76 9 38 chr2 27718194 27718540 -225538043 + MER57B LTR ERV1 102 434 0 398 209 0 12 chr2 27718798 27718884 -225537699 + MER4B-int LTR ERV1 1557 1641 -4690 642 140 0 0 chr2 27718887 27718994 -225537589 + MER72 LTR ERV1 1 107 -615 2876 99 59 60 chr2 27718994 27719159 -225537424 - MER4B LTR ERV1 0 779 615 2480 69 3 3 chr2 27719159 27719462 -225537121 + AluY SINE Alu 1 303 -8 2876 99 59 60 chr2 27719462 27719902 -225536681 - MER4B LTR ERV1 -164 615 1 755 153 0 15 chr2 27719903 27720040 -225536543 + MER4D LTR ERV1 105 239 -664 982 234 43 67 chr2 27720142 27720488 -225536095 + LTR10B LTR ERV1 210 547 0 21 36 0 0 chr2 27720532 27720560 -225536023 + AT_rich Low_complexity Low_complexity 1 28 0 3374 165 12 48 chr2 27720682 27721009 -225535574 + MER4D LTR ERV1 238 529 -374 2037 149 0 13 chr2 27721009 27721318 -225535265 - AluSx SINE Alu -1 311 7 3374 165 12 48 chr2 27721318 27721673 -225534910 + MER4D LTR ERV1 529 895 -8 913 158 45 25 chr2 27721719 27721921 -225534662 + LTR49-int LTR ERV1 1670 1875 -4456 1010 69 35 0 chr2 27721927 27722072 -225534511 + LTR56 LTR ERV1 188 337 -108 707 286 48 22 chr2 27722090 27722446 -225534137 + L1ME LINE L1 8 372 -5747 630 292 43 78 chr2 27722473 27722557 -225534026 + L1ME LINE L1 561 646 -5473 1925 177 0 0 chr2 27722557 27722862 -225533721 + AluJb SINE Alu 1 305 -7 630 292 43 78 chr2 27722862 27723223 -225533360 + L1ME LINE L1 646 986 -5133 2192 132 0 6 chr2 27723223 27723534 -225533049 + AluSx SINE Alu 3 311 -1 630 292 43 78 chr2 27723534 27723625 -225532958 + L1ME LINE L1 986 1079 -5040 * 696 255 28 47 chr2 27723609 27723931 -225532652 + L1ME LINE L1 5007 5322 -807 1003 165 0 17 chr2 27723937 27724113 -225532470 - FRAM SINE Alu -3 173 1 479 186 137 0 chr2 27724113 27724237 -225532346 + L1ME LINE L1 5317 5457 -690 2537 65 0 7 chr2 27724273 27724579 -225532004 + AluSx SINE Alu 1 304 -8 289 258 0 0 chr2 27724579 27724633 -225531950 + L1ME LINE L1 5662 5718 -435 587 203 84 0 chr2 27724648 27724791 -225531792 + LTR50 LTR ERVL 59 213 -582 376 254 42 34 chr2 27724843 27724885 -225531698 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27724885 27725186 -225531397 + AluSx SINE Alu 1 301 -11 376 254 42 34 chr2 27725186 27725319 -225531264 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27725401 27725467 -225531116 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27725536 27725699 -225530884 - FRAM SINE Alu -1 165 2 1792 143 43 7 chr2 27726013 27726292 -225530291 - AluJo SINE Alu -9 303 15 838 164 217 5 chr2 27726370 27726577 -225530006 + AluJo SINE Alu 48 298 -14 418 307 53 22 chr2 27726577 27726935 -225529648 - L1MEc LINE L1 -4746 1650 1282 776 157 31 13 chr2 27727398 27727557 -225529026 + AluSc SINE Alu 140 301 -8 247 274 0 0 chr2 27727558 27727609 -225528974 + L1ME LINE L1 5685 5735 -435 587 203 84 0 chr2 27727624 27727767 -225528816 + LTR50 LTR ERVL 59 213 -582 376 260 42 34 chr2 27727819 27727861 -225528722 + LTR50 LTR ERVL 326 366 -429 2130 133 0 0 chr2 27727861 27728162 -225528421 + AluSx SINE Alu 1 301 -11 376 260 42 34 chr2 27728162 27728295 -225528288 + LTR50 LTR ERVL 366 585 -210 391 121 30 0 chr2 27728377 27728443 -225528140 + LTR50 LTR ERVL 728 795 0 1111 129 12 6 chr2 27728512 27728675 -225527908 - FRAM SINE Alu -1 165 2 1710 158 47 30 chr2 27728992 27729290 -225527293 - AluJb SINE Alu -9 303 1 2141 117 0 39 chr2 27730337 27730646 -225525937 + AluSg SINE Alu 1 297 -13 2417 298 67 62 chr2 27731526 27733069 -225523514 + L2 LINE L2 443 1994 -1320 741 179 0 36 chr2 27733071 27733211 -225523372 - FRAM SINE Alu 0 40 1 2366 97 3 0 chr2 27733303 27733611 -225522972 - AluSp SINE Alu -4 309 1 771 222 54 52 chr2 27733662 27733941 -225522642 + L1MC/D LINE L1 5174 5458 -834 1945 149 0 3 chr2 27733941 27734258 -225522325 + AluSx SINE Alu 1 316 0 771 222 54 52 chr2 27734258 27734339 -225522244 + L1MC/D LINE L1 5458 5537 -755 351 0 0 0 chr2 27734447 27734486 -225522097 + (CA)n Simple_repeat Simple_repeat 2 40 0 1116 135 0 18 chr2 27734555 27734718 -225521865 - FRAM SINE Alu -8 168 9 2319 122 0 3 chr2 27734796 27735107 -225521476 - AluSx SINE Alu -2 310 1 1798 143 10 51 chr2 27735109 27735423 -225521160 - AluJb SINE Alu -11 301 1 524 264 83 61 chr2 27735796 27736103 -225520480 - MLT1L LTR MaLR -4 611 213 1882 166 7 10 chr2 27736196 27736504 -225520079 - AluJo SINE Alu -5 307 1 2466 206 6 61 chr2 27736504 27737032 -225519551 - L1M4 LINE L1 -1867 4279 3792 191 61 30 0 chr2 27737032 27737065 -225519518 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2466 206 6 61 chr2 27737065 27737191 -225519392 - L1M4 LINE L1 -2354 3792 3661 975 169 226 24 chr2 27737335 27737583 -225519000 - AluY SINE Alu 0 311 14 2241 113 10 0 chr2 27737949 27738250 -225518333 + AluSq SINE Alu 1 304 -9 2239 125 0 0 chr2 27738822 27739125 -225517458 - AluSx SINE Alu -9 303 1 1885 156 18 0 chr2 27739352 27739634 -225516949 + AluSx SINE Alu 3 289 -23 344 276 62 21 chr2 27739969 27740114 -225516469 + L1ME LINE L1 334 484 -5586 370 286 45 62 chr2 27740121 27740299 -225516284 + L1ME LINE L1 383 557 -5513 1576 170 3 35 chr2 27740329 27740640 -225515943 + AluJo SINE Alu 12 312 0 269 202 117 91 chr2 27740714 27740876 -225515707 + L1ME LINE L1 606 772 -5308 617 161 21 0 chr2 27740876 27740999 -225515584 + MSTD LTR MaLR 69 193 -203 2190 116 7 7 chr2 27740999 27741301 -225515282 + AluSx SINE Alu 1 302 -10 966 165 5 48 chr2 27741374 27741562 -225515021 + MSTD LTR MaLR 217 396 0 395 192 77 90 chr2 27741562 27741718 -225514865 - HAL1 LINE L1 -2332 175 22 198 0 0 0 chr2 27742633 27742655 -225513928 + (CA)n Simple_repeat Simple_repeat 2 23 0 442 70 14 14 chr2 27742742 27742813 -225513770 + MER53 DNA DNA 1 71 -118 875 268 72 27 chr2 27742818 27743260 -225513323 + MLT1L LTR MaLR 119 611 -4 2201 112 3 13 chr2 27743817 27744122 -225512461 - AluSq SINE Alu -11 302 1 262 313 180 14 chr2 27744197 27744475 -225512108 - L1MC4a LINE L1 -1741 6067 5744 614 293 76 50 chr2 27745006 27745170 -225511413 - L1MC4a LINE L1 -2057 5751 5593 2321 121 0 0 chr2 27745170 27745475 -225511108 + AluSx SINE Alu 1 305 -7 614 293 76 50 chr2 27745475 27745795 -225510788 - L1MC4a LINE L1 -2215 5593 5254 863 162 0 108 chr2 27745879 27746064 -225510519 + AluSg/x SINE Alu 135 299 -11 2255 95 10 13 chr2 27746105 27746409 -225510174 + AluSp SINE Alu 1 303 -10 781 251 15 10 chr2 27746494 27746693 -225509890 + L1MB8 LINE L1 4803 5002 -1144 1621 175 8 0 chr2 27746694 27746940 -225509643 + AluJb SINE Alu 50 297 -15 2475 86 0 0 chr2 27746941 27747242 -225509341 + AluSg SINE Alu 1 301 -9 294 242 30 0 chr2 27747243 27747309 -225509274 + L1MC2 LINE L1 6223 6290 -54 207 0 0 0 chr2 27747311 27747334 -225509249 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 888 144 95 10 chr2 27747363 27747471 -225509112 + L1MB8 LINE L1 5417 5514 -664 2221 75 14 3 chr2 27747471 27747780 -225508803 - AluSx SINE Alu 0 312 1 888 144 95 10 chr2 27747780 27747951 -225508632 + L1MB8 LINE L1 5514 5965 -213 671 204 133 11 chr2 27747958 27748139 -225508444 + L1MC/D LINE L1 746 948 -5592 367 224 60 60 chr2 27748663 27748797 -225507786 + L1MC/D LINE L1 4960 5093 -1447 335 300 60 69 chr2 27748847 27749080 -225507503 + L1MC/D LINE L1 5207 5437 -1103 2572 59 3 7 chr2 27749162 27749469 -225507114 + AluY SINE Alu 1 306 -5 1271 109 0 0 chr2 27749469 27749634 -225506949 + AluSg/x SINE Alu 132 296 -14 378 309 88 60 chr2 27749755 27749972 -225506611 + L1MC/D LINE L1 5649 5871 -2331 248 323 15 0 chr2 27749986 27750116 -225506467 - L1M4 LINE L1 -3173 2973 2842 1762 167 0 37 chr2 27750128 27750427 -225506156 + AluJb SINE Alu 1 288 -24 549 44 0 0 chr2 27750427 27750495 -225506088 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2385 94 0 0 chr2 27750772 27751069 -225505514 - AluY SINE Alu -14 297 1 262 213 64 11 chr2 27751077 27751171 -225505412 - L1MC4a LINE L1 -1857 5951 5853 1767 91 0 0 chr2 27751280 27751499 -225505084 + AluSq SINE Alu 1 219 -94 580 165 8 33 chr2 27751499 27751620 -225504963 + AluSp/q SINE Alu 188 305 -8 287 296 148 6 chr2 27751785 27751947 -225504636 - L1ME3A LINE L1 -208 5962 5778 207 88 0 0 chr2 27751984 27752018 -225504565 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 1049 158 224 70 chr2 27752020 27752261 -225504322 - AluJb SINE Alu -34 278 1 401 265 0 0 chr2 27752311 27752394 -225504189 + Charlie1a DNA MER1_type 1 83 -1372 1405 44 0 11 chr2 27752398 27752579 -225504004 - L1PA3 LINE L1 0 6155 5977 1772 5 0 0 chr2 27752579 27752784 -225503799 + L1PA3 LINE L1 5656 5860 -295 650 184 6 54 chr2 27752784 27752952 -225503631 + Charlie1a DNA MER1_type 72 231 -1224 626 184 0 40 chr2 27753000 27753125 -225503458 + AluSg/x SINE Alu 178 297 -13 455 161 0 35 chr2 27753126 27753213 -225503370 - MER112 DNA MER1_type -176 84 1 2342 75 48 3 chr2 27754000 27754293 -225502290 + AluSg1 SINE Alu 1 306 -3 1609 170 23 0 chr2 27754962 27755227 -225501356 - AluJo SINE Alu -5 307 37 2265 114 7 7 chr2 27759005 27759312 -225497271 + AluSx SINE Alu 1 307 -5 217 314 46 26 chr2 27760828 27760967 -225495616 + MIR3 SINE MIR 21 162 -46 235 288 151 0 chr2 27761094 27761167 -225495416 - L3 LINE CR1 -2 1575 1492 1369 59 10 49 chr2 27762334 27762537 -225494046 - MER107 DNA MER1_type -2 195 1 200 305 12 12 chr2 27762704 27762786 -225493797 + CT-rich Low_complexity Low_complexity 4 85 0 384 325 16 0 chr2 27765883 27766009 -225490574 - MIR3 SINE MIR -66 142 15 308 258 65 102 chr2 27766113 27766299 -225490284 - MIR SINE MIR -4 258 80 1817 100 0 54 chr2 27767222 27767481 -225489102 - AluSg SINE Alu -20 290 46 2582 30 0 7 chr2 27767535 27767830 -225488753 + AluY SINE Alu 17 309 -2 27 62 0 0 chr2 27768725 27768773 -225487810 + GC_rich Low_complexity Low_complexity 1 48 0 830 99 0 25 chr2 27770701 27770822 -225485761 - AluSp/q SINE Alu -3 310 193 202 308 142 25 chr2 27770950 27771070 -225485513 + L2 LINE L2 3139 3272 0 545 200 35 83 chr2 27771299 27771343 -225485240 + MER3 DNA MER1_type 1 46 -116 2395 86 7 0 chr2 27771343 27771633 -225484950 + AluSg SINE Alu 1 292 -18 545 200 35 83 chr2 27771633 27771733 -225484850 + MER3 DNA MER1_type 46 138 -71 731 159 38 15 chr2 27771737 27771869 -225484714 - AluJb SINE Alu -176 136 2 307 190 0 0 chr2 27771878 27771936 -225484647 + MER3 DNA MER1_type 152 209 0 1301 164 78 108 chr2 27772685 27773147 -225483436 - LTR7 LTR ERV1 -2 448 1 1289 178 0 14 chr2 27776107 27776326 -225480257 - AluJb SINE Alu -13 299 84 2204 115 10 0 chr2 27776347 27776652 -225479931 - AluSp SINE Alu -5 308 1 237 285 113 38 chr2 27776742 27776928 -225479655 + L2 LINE L2 3100 3299 -14 1788 144 10 39 chr2 27777129 27777434 -225479149 + AluJb SINE Alu 1 296 -16 2340 106 0 3 chr2 27777439 27777750 -225478833 + AluY SINE Alu 1 310 -1 844 237 147 21 chr2 27778350 27778819 -225477764 - L1MC5 LINE L1 -178 7783 7256 2355 105 0 0 chr2 27779913 27780219 -225476364 + AluSx SINE Alu 4 309 -3 259 293 197 14 chr2 27780954 27781101 -225475482 + MIR3 SINE MIR 35 208 0 2376 95 3 19 chr2 27782057 27782373 -225474210 - AluSp SINE Alu -2 311 1 681 234 21 0 chr2 27785208 27785349 -225471234 + FRAM SINE Alu 2 145 -31 1976 113 29 4 chr2 27785351 27785646 -225470937 - AluSp SINE Alu 0 302 1 2480 84 0 3 chr2 27785671 27785979 -225470604 - AluSc SINE Alu -2 307 1 1280 201 28 32 chr2 27786038 27786321 -225470262 - AluJo SINE Alu -20 292 11 2238 117 3 0 chr2 27786357 27786657 -225469926 + AluSg SINE Alu 1 301 -9 2215 110 7 0 chr2 27786717 27787007 -225469576 + AluSq SINE Alu 1 292 -21 2045 104 58 0 chr2 27787121 27787399 -225469184 + AluSq SINE Alu 1 294 -19 2421 83 0 3 chr2 27787755 27788067 -225468516 - AluY SINE Alu 0 311 1 444 265 38 23 chr2 27788509 27788641 -225467942 - MIR SINE MIR -108 154 21 953 148 11 85 chr2 27792464 27792653 -225463930 + AluJb SINE Alu 129 303 -9 234 259 84 21 chr2 27793901 27794044 -225462539 - L1ME LINE L1 -369 5752 5601 2254 105 3 10 chr2 27794388 27794694 -225461889 - AluSx SINE Alu -3 309 6 329 265 138 50 chr2 27795321 27795568 -225461015 + L2 LINE L2 2777 3049 -264 270 0 0 0 chr2 27795616 27795646 -225460937 + (CA)n Simple_repeat Simple_repeat 2 31 0 205 200 0 0 chr2 27795646 27795686 -225460897 + (TA)n Simple_repeat Simple_repeat 1 40 0 1913 138 50 0 chr2 27795686 27795969 -225460614 - AluJb SINE Alu -15 297 1 622 96 4 3 chr2 27796132 27796362 -225460221 + AluSg SINE Alu 1 297 -13 465 204 48 10 chr2 27796383 27796486 -225460097 + L2 LINE L2 3201 3307 -6 207 227 160 40 chr2 27796681 27796756 -225459827 + L2 LINE L2 3188 3271 -1 181 286 143 0 chr2 27796796 27796880 -225459703 - MIR SINE MIR -65 197 102 463 307 34 3 chr2 27797204 27797368 -225459215 + MIR SINE MIR 20 141 -67 528 245 116 19 chr2 27797705 27797860 -225458723 - MIR3 SINE MIR -9 199 30 292 186 51 0 chr2 27798183 27798242 -225458341 + MIR SINE MIR 128 189 -73 1293 119 11 0 chr2 27798973 27799150 -225457433 - AluSg/x SINE Alu -2 308 130 2380 103 0 10 chr2 27799350 27799662 -225456921 + AluSc SINE Alu 1 309 0 1954 78 112 4 chr2 27800116 27800385 -225456198 - AluYa8 SINE Alu -12 298 1 260 333 133 0 chr2 27800505 27800625 -225455958 - L2 LINE L2 0 3272 3137 1926 218 120 107 chr2 27800626 27800667 -225455916 - L2 LINE L2 -1 3312 3273 231 61 0 0 chr2 27800667 27800700 -225455883 + (CAGTA)n Simple_repeat Simple_repeat 3 35 0 1926 218 120 107 chr2 27800700 27800892 -225455691 - L2 LINE L2 -40 3273 3085 2449 87 3 10 chr2 27800892 27801204 -225455379 - AluSx SINE Alu -2 310 1 1926 218 120 107 chr2 27801204 27801941 -225454642 - L2 LINE L2 -228 3085 2358 2118 133 7 3 chr2 27801941 27802242 -225454341 - AluSx SINE Alu -10 302 1 1926 218 120 107 chr2 27802242 27802253 -225454330 - L2 LINE L2 -955 2358 2349 376 204 41 20 chr2 27802253 27802351 -225454232 - L1MC5 LINE L1 -36 7925 7826 1926 218 120 107 chr2 27802351 27802566 -225454017 - L2 LINE L2 -964 2349 2005 1159 158 0 0 chr2 27802638 27802809 -225453774 + AluJb SINE Alu 142 312 0 234 241 19 0 chr2 27802845 27802899 -225453684 - L2 LINE L2 -202 3070 3016 395 202 97 116 chr2 27803002 27803260 -225453323 - L2 LINE L2 -38 3234 2982 216 0 0 0 chr2 27804490 27804514 -225452069 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 255 277 103 0 chr2 27805080 27805203 -225451380 + MIR SINE MIR 23 155 -61 291 54 0 0 chr2 27806348 27806385 -225450198 + (CCCCCG)n Simple_repeat Simple_repeat 5 41 0 2316 94 7 10 chr2 27806462 27806769 -225449814 + AluSq SINE Alu 1 306 -7 201 133 0 0 chr2 27807121 27807151 -225449432 + L3 LINE CR1 1424 1453 -124 2221 104 0 47 chr2 27807410 27807728 -225448855 - AluSx SINE Alu -9 303 1 2138 104 7 4 chr2 27807736 27808048 -225448535 - AluSg SINE Alu 0 313 1 203 189 0 0 chr2 27808703 27808740 -225447843 + (TTG)n Simple_repeat Simple_repeat 3 39 0 2471 92 0 9 chr2 27808885 27809200 -225447383 + AluSx SINE Alu 1 312 0 2508 93 0 0 chr2 27809211 27809521 -225447062 + AluSg SINE Alu 1 310 0 194 0 39 0 chr2 27809765 27809791 -225446792 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1742 129 39 25 chr2 27809804 27810083 -225446500 - AluSx SINE Alu -28 284 2 1854 179 0 35 chr2 27810117 27810436 -225446147 + AluJb SINE Alu 1 308 -4 191 114 29 0 chr2 27810436 27810471 -225446112 + GA-rich Low_complexity Low_complexity 1 36 0 245 111 0 0 chr2 27811986 27812022 -225444561 + U2 snRNA snRNA 1 36 -152 450 53 0 0 chr2 27814252 27814309 -225442274 + (CA)n Simple_repeat Simple_repeat 1 57 0 2312 116 0 0 chr2 27814340 27814643 -225441940 + AluSg SINE Alu 1 303 -7 507 161 0 45 chr2 27816098 27816210 -225440373 - FLAM_A SINE Alu 0 142 36 1847 166 3 16 chr2 27817150 27817458 -225439125 - AluJb SINE Alu -8 304 1 1706 181 17 27 chr2 27817479 27817778 -225438805 - AluJo SINE Alu -16 296 1 474 237 23 15 chr2 27819104 27819235 -225437348 - Charlie4a DNA MER1_type -10 498 367 457 206 95 32 chr2 27819235 27819296 -225437287 + MER106B DNA MER1_type 1 57 -1002 2133 93 4 4 chr2 27819296 27819566 -225437017 - AluSp SINE Alu -43 270 1 457 206 95 32 chr2 27819566 27819690 -225436893 + MER106B DNA MER1_type 57 1022 -37 704 165 0 0 chr2 27819692 27819801 -225436782 + FLAM_A SINE Alu 8 116 -26 2422 102 0 0 chr2 27819810 27820115 -225436468 - AluSx SINE Alu -1 311 7 26 0 0 0 chr2 27820139 27820165 -225436418 + AT_rich Low_complexity Low_complexity 1 26 0 1021 181 32 48 chr2 27820204 27820336 -225436247 - Charlie4a DNA MER1_type -1581 380 249 1820 97 85 0 chr2 27820336 27820622 -225435961 + AluY SINE Alu 1 308 0 1021 181 32 48 chr2 27820622 27820734 -225435849 - Charlie4a DNA MER1_type -1712 249 137 275 143 71 79 chr2 27820925 27821021 -225435562 + MER113 DNA MER1_type? 11 107 -414 2127 146 0 3 chr2 27821021 27821330 -225435253 + AluSq SINE Alu 1 308 -5 275 143 71 79 chr2 27821330 27821359 -225435224 + MER113 DNA MER1_type? 107 135 -386 1206 187 13 18 chr2 27822242 27822467 -225434116 + AluJo SINE Alu 6 229 -83 1694 172 87 12 chr2 27822488 27822890 -225433693 - L1MB3 LINE L1 0 6183 5752 2244 89 3 10 chr2 27823688 27824017 -225432566 + AluSx SINE Alu 1 312 0 1657 168 33 0 chr2 27824065 27824369 -225432214 - AluJb SINE Alu 0 313 1 838 248 4 69 chr2 27824392 27824558 -225432025 + MIR SINE MIR 1 147 -115 2264 97 7 7 chr2 27824558 27824858 -225431725 + AluSc SINE Alu 1 300 -9 838 248 4 69 chr2 27824858 27824937 -225431646 + MIR SINE MIR 147 230 -32 2447 95 0 7 chr2 27825321 27825627 -225430956 - AluSx SINE Alu -8 304 1 281 299 144 0 chr2 27827024 27827121 -225429462 + L2 LINE L2 3203 3313 0 2146 100 78 0 chr2 27828256 27828537 -225428046 + AluSx SINE Alu 1 303 -9 189 0 0 0 chr2 27831686 27831707 -225424876 + (T)n Simple_repeat Simple_repeat 1 21 0 194 175 50 0 chr2 27833051 27833091 -225423492 - MIR SINE MIR -60 148 107 2121 103 21 3 chr2 27833095 27833385 -225423198 + AluSq SINE Alu 5 299 -14 2262 119 0 16 chr2 27834330 27834640 -225421943 - AluSx SINE Alu -7 305 1 253 269 30 0 chr2 27834794 27834861 -225421722 - MIR SINE MIR -30 232 164 1726 165 3 38 chr2 27835062 27835378 -225421205 - AluJb SINE Alu -7 305 1 700 158 0 86 chr2 27835380 27835444 -225421139 - FLAM_C SINE Alu -172 140 72 2557 34 41 3 chr2 27835444 27835739 -225420844 - AluY SINE Alu -5 306 1 700 158 0 86 chr2 27835739 27835826 -225420757 - FLAM_C SINE Alu -240 72 2 200 316 132 11 chr2 27836125 27836299 -225420284 - L2 LINE L2 -830 2484 2290 411 226 118 0 chr2 27836353 27836455 -225420128 + L2 LINE L2 3195 3308 -5 2658 54 0 6 chr2 27836981 27837294 -225419289 + AluY SINE Alu 1 311 0 722 192 0 0 chr2 27838156 27838281 -225418302 + FLAM_A SINE Alu 4 128 -5 217 193 24 48 chr2 27839140 27839223 -225417360 + C-rich Low_complexity Low_complexity 3 83 0 286 255 176 0 chr2 27839737 27839839 -225416744 - MIR SINE MIR -115 147 28 185 311 75 19 chr2 27839958 27840064 -225416519 + MIR3 SINE MIR 81 192 -16 1554 82 0 29 chr2 27840845 27841012 -225415571 - AluSg/x SINE Alu -13 299 138 2432 88 3 0 chr2 27841012 27841307 -225415276 - AluSp SINE Alu -17 296 1 1554 82 0 29 chr2 27841307 27841347 -225415236 - AluSg/x SINE Alu -174 138 98 1976 158 0 0 chr2 27841347 27841632 -225414951 - AluJb SINE Alu -27 285 1 1939 144 6 44 chr2 27841634 27841953 -225414630 - AluJo SINE Alu -3 309 3 2062 145 3 3 chr2 27841962 27842259 -225414324 - AluJo SINE Alu -15 297 1 372 22 0 0 chr2 27843053 27843098 -225413485 + (CA)n Simple_repeat Simple_repeat 2 46 0 249 33 0 0 chr2 27843439 27843469 -225413114 + (CTGGGG)n Simple_repeat Simple_repeat 1 30 0 180 152 0 0 chr2 27844515 27844548 -225412035 + (TG)n Simple_repeat Simple_repeat 1 33 0 531 266 80 34 chr2 27845778 27846015 -225410568 + MIR SINE MIR 1 248 -14 292 226 77 54 chr2 27846647 27846815 -225409768 + L1ME4a LINE L1 5946 6117 -4 301 233 55 0 chr2 27847432 27847505 -225409078 - MIR3 SINE MIR -4 204 128 2233 98 0 0 chr2 27847507 27847804 -225408779 + AluSc SINE Alu 1 297 -12 876 156 0 0 chr2 27847805 27847946 -225408637 - FRAM SINE Alu -35 141 1 230 308 67 10 chr2 27847946 27848050 -225408533 - MIR3 SINE MIR -49 159 50 23 0 0 0 chr2 27850394 27850417 -225406166 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr2 27851000 27851025 -225405558 + GC_rich Low_complexity Low_complexity 1 25 0 1982 66 81 11 chr2 27851293 27851564 -225405019 + AluY SINE Alu 9 298 -13 264 249 49 100 chr2 27851570 27851834 -225404749 + L1MEd LINE L1 1001 1344 -1146 474 271 94 54 chr2 27852322 27852525 -225404058 + MIR SINE MIR 38 248 -14 228 328 16 0 chr2 27852556 27852620 -225403963 + MIR SINE MIR 42 106 -102 287 350 44 22 chr2 27852971 27853151 -225403432 + MIR SINE MIR 9 192 -70 21 0 0 0 chr2 27854808 27854829 -225401754 + GC_rich Low_complexity Low_complexity 1 21 0 312 282 107 8 chr2 27856111 27856205 -225400378 + MIR3 SINE MIR 42 154 -54 2362 87 0 0 chr2 27856205 27856514 -225400069 + AluSg SINE Alu 1 309 -1 312 282 107 8 chr2 27856514 27856550 -225400033 + MIR3 SINE MIR 154 185 -23 204 121 0 0 chr2 27856786 27856819 -225399764 - L2 LINE L2 -9 3304 3272 2025 96 36 0 chr2 27857229 27857509 -225399074 - AluSx SINE Alu -22 290 1 2268 94 0 13 chr2 27857847 27858156 -225398427 - AluSg SINE Alu -5 305 1 1889 151 3 19 chr2 27858157 27858474 -225398109 - AluJo SINE Alu 0 312 1 374 290 142 18 chr2 27860532 27860701 -225395882 - MIR3 SINE MIR -7 201 12 2013 137 3 0 chr2 27860829 27861121 -225395462 - AluSx SINE Alu -19 293 1 1815 155 23 16 chr2 27861152 27861461 -225395122 + AluJo SINE Alu 1 311 -1 195 273 227 55 chr2 27862609 27862654 -225393929 - MIR SINE MIR -72 190 154 225 94 0 0 chr2 27862654 27862686 -225393897 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 2149 102 0 0 chr2 27862686 27862971 -225393612 - AluSx SINE Alu -27 285 1 195 273 227 55 chr2 27862971 27863052 -225393531 - MIR SINE MIR -107 155 41 344 219 14 0 chr2 27863335 27863408 -225393175 - MIR SINE MIR -105 103 30 306 293 50 7 chr2 27864615 27864755 -225391828 + MIR3 SINE MIR 48 193 -15 2053 121 10 0 chr2 27865167 27865474 -225391109 - AluSx SINE Alu -2 310 1 2075 96 39 0 chr2 27865474 27865755 -225390828 - AluSx SINE Alu -20 292 1 2188 86 0 0 chr2 27865862 27866171 -225390412 - AluSx SINE Alu 0 311 3 832 161 22 83 chr2 27866433 27866663 -225389920 + AluJo SINE Alu 87 302 -10 1872 156 0 3 chr2 27866763 27867064 -225389519 + AluSx SINE Alu 13 312 0 2165 112 0 3 chr2 27867064 27867369 -225389214 + AluSg SINE Alu 1 304 -6 2234 95 10 0 chr2 27867436 27867742 -225388841 - AluSq SINE Alu -4 309 1 241 384 0 30 chr2 27867754 27867887 -225388696 - MIR SINE MIR -124 138 10 273 282 86 55 chr2 27870713 27870876 -225385707 + MIR3 SINE MIR 18 185 -23 267 196 0 0 chr2 27871019 27871070 -225385513 + MIR3 SINE MIR 155 205 -3 304 231 131 62 chr2 27871416 27871546 -225385037 + MIR SINE MIR 30 168 -94 2006 117 3 10 chr2 27872201 27872492 -225384091 - AluSx SINE Alu -23 289 1 436 275 161 21 chr2 27872913 27873149 -225383434 + L3 LINE CR1 1140 1408 -169 2197 69 17 3 chr2 27874435 27874724 -225381859 - AluY SINE Alu -18 293 1 2155 99 10 0 chr2 27874726 27875019 -225381564 - AluSq SINE Alu -17 296 1 519 156 0 56 chr2 27875045 27875065 -225381518 + AluJo SINE Alu 33 53 -259 4308 85 0 18 chr2 27875065 27875453 -225381130 + MER41A LTR ERV1 1 377 -177 2137 115 7 0 chr2 27875453 27875757 -225380826 + AluSq SINE Alu 1 306 -7 4308 85 0 18 chr2 27875757 27875932 -225380651 + MER41A LTR ERV1 377 554 0 519 156 0 56 chr2 27875932 27876001 -225380582 + AluJo SINE Alu 53 117 -195 1536 131 40 24 chr2 27876016 27876268 -225380315 - AluJb SINE Alu -21 291 36 194 133 0 22 chr2 27876276 27876321 -225380262 + (CTA)n Simple_repeat Simple_repeat 1 44 0 817 170 15 78 chr2 27876385 27876422 -225380161 + AluJo SINE Alu 104 142 -170 2147 89 3 3 chr2 27876422 27876747 -225379836 + AluSq SINE Alu 4 313 0 817 170 15 78 chr2 27876747 27876915 -225379668 + AluJo SINE Alu 142 296 -16 1508 123 131 0 chr2 27876919 27877171 -225379412 + AluSx SINE Alu 2 286 -16 369 0 0 0 chr2 27877174 27877215 -225379368 + (TAGA)n Simple_repeat Simple_repeat 3 43 0 856 230 6 6 chr2 27877216 27877381 -225379202 + FRAM SINE Alu 1 165 -1 228 182 0 0 chr2 27878828 27878872 -225377711 + MIR SINE MIR 27 70 -138 1869 140 0 3 chr2 27878889 27879175 -225377408 - AluJb SINE Alu -9 303 19 1669 243 98 25 chr2 27879738 27879830 -225376753 + MLT1J LTR MaLR 3 87 -424 1994 146 0 0 chr2 27879830 27880131 -225376452 + AluSx SINE Alu 1 301 -11 1669 243 98 25 chr2 27880131 27880508 -225376075 + MLT1J LTR MaLR 87 506 -5 2108 100 7 3 chr2 27881283 27881573 -225375010 + AluSq SINE Alu 1 291 -22 841 102 0 88 chr2 27881672 27881819 -225374764 + AluSg/x SINE Alu 163 296 -16 603 185 39 23 chr2 27881951 27882081 -225374502 - FLAM_A SINE Alu -1 132 1 364 306 12 0 chr2 27882090 27882175 -225374408 - L1MC4 LINE L1 -1338 6704 6619 1849 127 7 3 chr2 27882175 27882459 -225374124 - AluJb SINE Alu -27 285 1 283 251 103 55 chr2 27882465 27882756 -225373827 - L1MEd LINE L1 -5214 905 601 2179 103 0 0 chr2 27882829 27883119 -225373464 - AluSc SINE Alu -19 290 1 2002 113 20 13 chr2 27885060 27885361 -225371222 + AluSq SINE Alu 8 310 -3 2076 116 3 16 chr2 27885369 27885680 -225370903 + AluSx SINE Alu 1 307 -5 916 251 25 77 chr2 27885861 27886041 -225370542 + HAL1b LINE L1 733 921 -427 2134 97 3 3 chr2 27886041 27886330 -225370253 - AluSc SINE Alu -20 289 1 916 251 25 77 chr2 27886330 27886361 -225370222 + HAL1b LINE L1 921 952 -396 1749 176 0 3 chr2 27886361 27886663 -225369920 + AluJb SINE Alu 1 301 -11 916 251 25 77 chr2 27886663 27886881 -225369702 + HAL1b LINE L1 952 1141 -207 189 74 0 0 chr2 27886881 27886908 -225369675 + (TTAG)n Simple_repeat Simple_repeat 2 28 0 726 93 75 0 chr2 27886909 27887016 -225369567 - AluJb SINE Alu -197 115 1 2267 82 3 0 chr2 27887113 27887418 -225369165 - AluY SINE Alu -5 306 1 2128 109 0 0 chr2 27887424 27887717 -225368866 - AluSc SINE Alu -15 294 2 747 183 8 15 chr2 27887721 27887852 -225368731 - FLAM_C SINE Alu -3 130 1 1532 176 44 10 chr2 27887861 27888157 -225368426 - AluSx SINE Alu -6 306 1 884 192 0 0 chr2 27888752 27888908 -225367675 - AluJo SINE Alu -37 275 120 721 281 32 56 chr2 27888999 27889347 -225367236 + L2 LINE L2 1426 1764 -1550 1613 191 3 7 chr2 27889347 27889645 -225366938 - AluJo SINE Alu -15 297 1 721 281 32 56 chr2 27889645 27889727 -225366856 + L2 LINE L2 1764 1846 -1468 1799 136 3 14 chr2 27940574 27940869 -225315714 + AluJb SINE Alu 1 292 -20 2060 129 3 3 chr2 27940875 27941185 -225315398 + AluSx SINE Alu 1 310 -2 30 0 0 0 chr2 27942305 27942335 -225314248 + AT_rich Low_complexity Low_complexity 1 30 0 2142 82 14 0 chr2 27942368 27942662 -225313921 - AluY SINE Alu -13 298 1 852 149 14 7 chr2 27942793 27942941 -225313642 - AluJb SINE Alu -26 286 138 1495 166 17 10 chr2 27942951 27943247 -225313336 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 27943250 27943271 -225313312 + AT_rich Low_complexity Low_complexity 1 21 0 337 241 48 0 chr2 27943570 27943653 -225312930 + MER88 LTR ERVL 79 165 -299 306 321 15 37 chr2 27943583 27943717 -225312866 - MER74B LTR ERVL -75 547 417 * 1544 176 7 0 chr2 27943722 27943995 -225312588 - AluSq SINE Alu -38 275 1 2179 70 7 3 chr2 27944006 27944290 -225312293 - AluSg SINE Alu -17 293 9 476 237 61 0 chr2 27944298 27944412 -225312171 - MER74B LTR ERVL -191 431 311 21 0 0 0 chr2 27944791 27944812 -225311771 + AT_rich Low_complexity Low_complexity 1 21 0 1946 123 0 7 chr2 27944834 27945135 -225311448 - AluY SINE Alu -12 299 1 2090 91 3 7 chr2 27945148 27945446 -225311137 - AluSx SINE Alu -15 297 1 358 173 62 37 chr2 27945447 27945528 -225311055 + MER74B LTR ERVL 91 173 -449 2132 111 0 3 chr2 27945528 27945825 -225310758 - AluSx SINE Alu -16 296 1 1742 96 56 8 chr2 27945972 27946223 -225310360 - AluSc SINE Alu -46 263 1 293 269 212 60 chr2 27946447 27947031 -225309552 - L2 LINE L2 -1298 2016 1344 280 316 199 15 chr2 27947068 27947410 -225309173 - L2 LINE L2 -2136 1178 774 1866 116 14 17 chr2 27947534 27947828 -225308755 - AluSg SINE Alu -17 293 1 1721 141 44 3 chr2 27948192 27948489 -225308094 - AluSx SINE Alu -3 309 1 2145 123 0 0 chr2 27948629 27948930 -225307653 - AluSq SINE Alu -12 301 1 618 71 0 0 chr2 27948941 27949025 -225307558 - L1PA6 LINE L1 -6 6148 6065 341 290 269 14 chr2 27949048 27949132 -225307451 - L1MC4 LINE L1 -31 8011 7950 2310 93 3 3 chr2 27949132 27949445 -225307138 - AluSp SINE Alu 0 313 1 341 290 269 14 chr2 27949445 27949639 -225306944 - L1MC4 LINE L1 -92 7950 7662 2124 113 7 7 chr2 27949986 27950296 -225306287 - AluSx SINE Alu -2 310 1 1585 163 13 49 chr2 27950301 27950459 -225306124 - AluJo SINE Alu -17 295 152 2121 106 0 7 chr2 27950459 27950761 -225305822 - AluSx SINE Alu -12 300 1 1585 163 13 49 chr2 27950761 27950908 -225305675 - AluJo SINE Alu -160 152 1 947 181 33 0 chr2 27951024 27951206 -225305377 - MER5A DNA MER1_type -1 188 1 1670 123 11 0 chr2 27951332 27951592 -225304991 - AluSx SINE Alu -11 301 39 1345 190 7 19 chr2 27951645 27951914 -225304669 - AluJb SINE Alu -46 266 1 1176 167 0 33 chr2 27951971 27952181 -225304402 + AluJo SINE Alu 87 289 -23 1884 104 22 22 chr2 27952369 27952647 -225303936 + AluSx SINE Alu 1 278 -34 480 339 152 37 chr2 27952662 27952984 -225303599 - L1MC4a LINE L1 -267 5854 5496 300 248 90 21 chr2 27952985 27953130 -225303453 - L1MC4a LINE L1 -2330 5478 5324 2292 61 10 0 chr2 27953131 27953425 -225303158 + AluSq SINE Alu 1 297 -16 272 119 85 68 chr2 27953666 27953725 -225302858 - MER113 DNA MER1_type? -3 518 459 301 221 63 0 chr2 27953848 27953943 -225302640 - MER113 DNA MER1_type? -410 111 11 2040 112 3 0 chr2 27955075 27955361 -225301222 - AluSx SINE Alu -25 287 1 2139 73 4 0 chr2 27955723 27956030 -225300553 - AluSx SINE Alu 0 313 6 26 30 0 0 chr2 27956035 27956068 -225300515 + AT_rich Low_complexity Low_complexity 1 33 0 1529 188 108 42 chr2 27956329 27956513 -225300070 - MLT1D LTR MaLR 0 505 335 2033 91 31 7 chr2 27956513 27956800 -225299783 - AluSx SINE Alu -18 294 1 1529 188 108 42 chr2 27956800 27956993 -225299590 - MLT1D LTR MaLR -170 335 103 1214 99 0 0 chr2 27957026 27957216 -225299367 + AluSg/x SINE Alu 120 309 0 1866 122 14 0 chr2 27957217 27957513 -225299070 + AluSx SINE Alu 1 300 -12 279 292 44 51 chr2 27957839 27957976 -225298607 + MER5A DNA MER1_type 25 160 -29 967 171 6 12 chr2 27958256 27958420 -225298163 + FRAM SINE Alu 4 166 0 244 185 108 31 chr2 27958422 27958487 -225298096 - L1MB8 LINE L1 -44 6134 6065 879 120 57 34 chr2 27958569 27958744 -225297839 + L1M2 LINE L1 5126 5304 -842 1278 154 0 9 chr2 27958744 27958958 -225297625 + AluSx SINE Alu 1 212 -100 563 59 0 0 chr2 27958958 27959026 -225297557 + AluSp SINE Alu 78 145 -168 2130 108 3 16 chr2 27959026 27959342 -225297241 + AluSq SINE Alu 1 312 -1 1554 120 34 48 chr2 27959349 27959640 -225296943 + L1M2 LINE L1 5324 5610 -702 225 188 9 9 chr2 27959905 27959977 -225296606 + G-rich Low_complexity Low_complexity 1 72 0 1969 73 22 0 chr2 27960108 27960422 -225296161 + AluY SINE Alu 1 320 0 343 242 184 81 chr2 27960429 27960560 -225296023 - L1MC5 LINE L1 -469 7492 7376 2108 105 0 20 chr2 27960560 27960866 -225295717 - AluSx SINE Alu -12 300 1 343 242 184 81 chr2 27960866 27960957 -225295626 - L1MC5 LINE L1 -585 7376 7247 449 204 90 95 chr2 27961034 27961149 -225295434 - L1MC5 LINE L1 -737 7224 7109 1927 97 3 20 chr2 27961149 27961449 -225295134 + AluSx SINE Alu 3 297 -15 449 204 90 95 chr2 27961449 27961544 -225295039 - L1MC5 LINE L1 -852 7109 7015 243 88 0 0 chr2 27961559 27961593 -225294990 + (T)n Simple_repeat Simple_repeat 1 34 0 10228 32 9 106 chr2 27961624 27963158 -225293425 - SVA Other Other 0 1386 1 185 261 22 0 chr2 27963291 27963337 -225293246 - L2 LINE L2 -577 2737 2691 1215 192 81 37 chr2 27963339 27963635 -225292948 + AluJb SINE Alu 1 308 0 568 286 29 55 chr2 27963687 27963960 -225292623 + L1MC4a LINE L1 5589 5854 -1954 769 193 0 0 chr2 27963961 27964096 -225292487 + AluJo SINE Alu 2 136 -176 2282 72 7 0 chr2 27964096 27964401 -225292182 + AluSg SINE Alu 1 307 -3 792 115 0 18 chr2 27964401 27964514 -225292069 - AluJo/FLAM SINE Alu -200 112 2 594 218 0 24 chr2 27965263 27965387 -225291196 + MIR SINE MIR 3 123 -139 499 251 38 66 chr2 27965414 27965506 -225291077 + MIR SINE MIR 79 165 -97 1841 116 65 0 chr2 27965506 27965782 -225290801 - AluSx SINE Alu -18 294 1 499 251 38 66 chr2 27965782 27965872 -225290711 + MIR SINE MIR 165 256 -6 1765 159 14 0 chr2 27965890 27966173 -225290410 - AluJb SINE Alu -25 287 1 205 260 80 0 chr2 27966197 27966247 -225290336 + L2 LINE L2 3205 3258 -14 2152 90 0 32 chr2 27967131 27967441 -225289142 - AluSp SINE Alu -12 301 2 2321 74 0 0 chr2 27967454 27967752 -225288831 - AluY SINE Alu -13 298 1 1002 154 0 3 chr2 27967961 27968114 -225288469 - AluJb SINE Alu -22 290 67 198 0 0 0 chr2 27968114 27968136 -225288447 + (TG)n Simple_repeat Simple_repeat 2 23 0 1002 154 0 3 chr2 27968136 27968171 -225288412 - AluJb SINE Alu -245 67 33 213 39 0 0 chr2 27968171 27968197 -225288386 + (TG)n Simple_repeat Simple_repeat 1 26 0 703 200 109 17 chr2 27968205 27968287 -225288296 - AluJo SINE Alu -109 203 130 414 0 0 0 chr2 27968287 27968333 -225288250 + (TG)n Simple_repeat Simple_repeat 2 47 0 703 200 109 17 chr2 27968333 27968425 -225288158 - AluJo SINE Alu -182 130 13 21 36 0 0 chr2 27968441 27968469 -225288114 + AT_rich Low_complexity Low_complexity 1 28 0 1546 150 95 11 chr2 27968471 27968745 -225287838 + AluJo SINE Alu 1 297 -5 945 110 103 0 chr2 27973366 27973511 -225283072 + MSTA LTR MaLR 268 427 -1 1288 169 4 13 chr2 27973616 27973853 -225282730 - AluJb SINE Alu -73 239 5 4794 113 70 40 chr2 27973856 27973976 -225282607 - L1MA2 LINE L1 -232 6072 5957 1949 118 7 0 chr2 27973976 27974278 -225282305 - AluSx SINE Alu 0 304 1 4794 113 70 40 chr2 27974278 27974853 -225281730 - L1MA2 LINE L1 -347 5957 5401 2275 92 0 19 chr2 27974853 27975169 -225281414 - AluSg SINE Alu 0 310 1 4794 113 70 40 chr2 27975169 27975236 -225281347 - L1MA2 LINE L1 -903 5401 5337 204 40 0 0 chr2 27975236 27975261 -225281322 + (TA)n Simple_repeat Simple_repeat 1 25 0 4794 113 70 40 chr2 27975261 27975567 -225281016 - L1MA2 LINE L1 -967 5337 4949 1861 149 129 18 chr2 27975567 27975940 -225280643 - MSTA LTR MaLR -14 414 1 3135 121 10 10 chr2 27975940 27976430 -225280153 - L1MA2 LINE L1 -1212 4934 4442 1947 103 0 67 chr2 27976430 27976742 -225279841 + AluSg SINE Alu 4 294 -16 1131 149 0 0 chr2 27976742 27976917 -225279666 - L1MA2 LINE L1 -1924 4222 4048 3186 182 39 42 chr2 27976924 27977745 -225278838 - L1MD3 LINE L1 0 7995 6990 937 159 6 23 chr2 27977765 27977941 -225278642 - AluJb SINE Alu -4 308 136 692 181 6 30 chr2 27977943 27978109 -225278474 - L1MC3 LINE L1 -827 6958 6797 1655 174 3 10 chr2 27978442 27978741 -225277842 + AluJo SINE Alu 1 297 -15 279 0 0 0 chr2 27978846 27978877 -225277706 + (TG)n Simple_repeat Simple_repeat 2 32 0 682 171 0 0 chr2 27978931 27979042 -225277541 - FLAM_A SINE Alu -4 138 28 2154 90 3 13 chr2 27981480 27981781 -225274802 + AluSx SINE Alu 1 298 -14 268 273 0 0 chr2 27981999 27982065 -225274518 + L2 LINE L2 3242 3307 -6 434 101 81 111 chr2 27982626 27982655 -225273928 - Charlie5 DNA MER1_type 0 2624 2596 1883 143 3 19 chr2 27982655 27982969 -225273614 + AluJo SINE Alu 1 309 -3 434 101 81 111 chr2 27982969 27983038 -225273545 - Charlie5 DNA MER1_type -28 2596 2529 2098 98 0 36 chr2 27983038 27983345 -225273238 + AluSx SINE Alu 1 296 -16 565 120 0 0 chr2 27983361 27983436 -225273147 - AluS SINE Alu -235 76 2 498 146 85 61 chr2 27983437 27983602 -225272981 - Charlie5 DNA MER1_type -77 2535 2367 1810 134 10 26 chr2 27983730 27984043 -225272540 - AluSx SINE Alu -4 308 1 914 130 147 6 chr2 27984070 27984247 -225272336 - Charlie5 DNA MER1_type -2410 202 1 626 172 144 58 chr2 27984633 27984807 -225271776 + MER53 DNA DNA 1 189 0 1227 274 120 58 chr2 27984815 27985194 -225271389 + MLT1K LTR MaLR 3 428 -160 2014 121 3 3 chr2 27985194 27985492 -225271091 + AluSx SINE Alu 1 298 -14 1227 274 120 58 chr2 27985492 27985662 -225270921 + MLT1K LTR MaLR 428 586 -2 279 213 0 0 chr2 27986157 27986204 -225270379 + MER94 DNA DNA 72 118 -16 234 301 71 35 chr2 27986337 27986450 -225270133 + L2 LINE L2 3187 3303 -10 1929 142 0 0 chr2 27986450 27986746 -225269837 + AluSx SINE Alu 1 296 -16 372 298 57 32 chr2 27986759 27986917 -225269666 - MIR SINE MIR -65 197 36 2305 106 19 37 chr2 27987152 27987528 -225269055 + THE1C LTR MaLR 1 369 -6 1821 102 0 4 chr2 27987528 27987782 -225268801 + AluSc SINE Alu 45 297 -12 541 306 37 41 chr2 27988127 27988201 -225268382 + L1MC4a LINE L1 4630 4703 -1443 2170 118 0 13 chr2 27988201 27988515 -225268068 + AluSx SINE Alu 1 310 -2 541 306 37 41 chr2 27988515 27988720 -225267863 + L1MC4a LINE L1 4703 4907 -1239 1720 152 0 42 chr2 27988720 27989030 -225267553 + AluJo SINE Alu 1 297 -15 189 0 0 0 chr2 27989030 27989051 -225267532 + (TA)n Simple_repeat Simple_repeat 1 21 0 541 306 37 41 chr2 27989051 27989233 -225267350 + L1MC4a LINE L1 4905 5091 -1055 1530 165 14 14 chr2 27989233 27989518 -225267065 + AluJb SINE Alu 13 297 -15 2074 106 7 0 chr2 27989521 27989839 -225266744 + AluSx SINE Alu 1 320 0 1789 229 113 11 chr2 27989841 27990408 -225266175 + L1MC4a LINE L1 5420 6044 -1764 210 204 0 20 chr2 27990481 27990530 -225266053 + (TA)n Simple_repeat Simple_repeat 2 49 0 1008 225 38 45 chr2 27990530 27990797 -225265786 + L1MC4 LINE L1 6614 6878 -1164 351 0 0 0 chr2 27990848 27990887 -225265696 + (CA)n Simple_repeat Simple_repeat 2 40 0 349 246 110 8 chr2 27990888 27991006 -225265577 + L1MC4 LINE L1 5802 5931 -1877 2859 202 125 45 chr2 27991040 27991242 -225265341 + L1MC4 LINE L1 6907 7091 -951 2050 125 10 0 chr2 27991242 27991546 -225265037 - AluSx SINE Alu -3 309 3 2859 202 125 45 chr2 27991546 27992215 -225264368 + L1MC4 LINE L1 7091 7848 -194 2257 103 3 0 chr2 27992243 27992543 -225264040 - AluSx SINE Alu -11 301 1 210 211 14 42 chr2 27996465 27996536 -225260047 + G-rich Low_complexity Low_complexity 3 71 0 2456 59 3 10 chr2 27996953 27997258 -225259325 + AluY SINE Alu 1 303 -8 2242 94 31 0 chr2 27997268 27997556 -225259027 + AluSx SINE Alu 1 297 -15 2002 159 3 0 chr2 27998051 27998346 -225258237 + AluJb SINE Alu 11 306 -6 2543 57 7 0 chr2 27998569 27998868 -225257715 + AluY SINE Alu 1 301 -10 215 286 0 48 chr2 27999016 27999079 -225257504 - L2 LINE L2 -22 3250 3191 2197 124 16 0 chr2 27999364 27999671 -225256912 - AluSx SINE Alu 0 312 1 202 259 0 0 chr2 28001873 28001927 -225254656 + (CCCCG)n Simple_repeat Simple_repeat 2 55 0 2350 77 13 3 chr2 28002954 28003253 -225253330 + AluSx SINE Alu 1 302 -10 2367 98 0 3 chr2 28004008 28004304 -225252279 - AluSx SINE Alu -15 297 3 1974 115 0 77 chr2 28005856 28006038 -225250545 - AluSx SINE Alu -10 302 154 2992 13 0 0 chr2 28006038 28006356 -225250227 - AluYb8 SINE Alu 0 318 1 1974 115 0 77 chr2 28006356 28006496 -225250087 - AluSx SINE Alu -158 154 5 196 244 0 0 chr2 28006502 28006543 -225250040 + L3b LINE CR1 1534 1574 -9 2497 80 0 10 chr2 28007442 28007756 -225248827 - AluY SINE Alu 0 311 1 849 107 43 130 chr2 28009862 28009949 -225246634 + Charlie5 DNA MER1_type 2355 2448 -137 2173 128 0 3 chr2 28009949 28010247 -225246336 - AluSx SINE Alu -13 299 3 849 107 43 130 chr2 28010247 28010412 -225246171 + Charlie5 DNA MER1_type 2448 2585 0 2290 73 0 11 chr2 28010839 28011163 -225245420 + AluY SINE Alu 1 321 0 25 0 0 0 chr2 28011300 28011325 -225245258 + AT_rich Low_complexity Low_complexity 1 25 0 234 150 0 0 chr2 28011325 28011365 -225245218 + (TA)n Simple_repeat Simple_repeat 1 40 0 1393 210 80 70 chr2 28011365 28011832 -225244751 + MLT2B1 LTR ERVL 1 475 -45 1303 197 41 90 chr2 28011832 28012198 -225244385 - MER7A DNA MER2_type 0 346 1 1393 210 80 70 chr2 28012198 28012215 -225244368 + MLT2B1 LTR ERVL 475 490 -30 2455 72 0 10 chr2 28014781 28015087 -225241496 + AluY SINE Alu 2 304 -7 2392 83 3 0 chr2 28015285 28015574 -225241009 + AluSc SINE Alu 1 290 -19 2355 115 0 0 chr2 28016116 28016420 -225240163 + AluSx SINE Alu 1 304 -8 2040 133 3 20 chr2 28016641 28016942 -225239641 + AluJb SINE Alu 1 296 -16 8455 54 2 0 chr2 28019328 28020295 -225236288 + LTR5 LTR ERVK 1 969 0 601 147 161 14 chr2 28021318 28021387 -225235196 + MER69A DNA AcHobo 13 71 -2455 2106 112 3 7 chr2 28021387 28021681 -225234902 - AluSx SINE Alu -19 293 1 601 147 161 14 chr2 28021681 28021754 -225234829 + MER69A DNA AcHobo 71 176 -1 1141 300 109 20 chr2 28022584 28022775 -225233808 - L2 LINE L2 0 3313 3140 1405 59 99 63 chr2 28022775 28022997 -225233586 - MER30 DNA MER1_type 0 230 1 1141 300 109 20 chr2 28022997 28023585 -225232998 - L2 LINE L2 -173 3140 2451 521 311 52 52 chr2 28023603 28023851 -225232732 - MIR SINE MIR -11 251 4 1871 165 13 0 chr2 28023961 28024264 -225232319 - AluSx SINE Alu -5 307 1 2335 94 3 10 chr2 28024381 28024690 -225231893 - AluSx SINE Alu -5 307 1 2209 95 3 30 chr2 28025722 28026027 -225230556 - AluSx SINE Alu -14 298 2 974 185 10 36 chr2 28027436 28027690 -225228893 - AluJo SINE Alu 0 371 123 2231 115 7 0 chr2 28027930 28028226 -225228357 - AluSx SINE Alu -14 298 1 638 317 93 45 chr2 28028236 28028357 -225228226 - L1MEc LINE L1 -4563 1833 1719 2249 127 3 0 chr2 28028357 28028664 -225227919 - AluSx SINE Alu -4 308 1 638 317 93 45 chr2 28028664 28028895 -225227688 - L1MEc LINE L1 -4677 1719 1464 2456 84 6 6 chr2 28028897 28029208 -225227375 - AluY SINE Alu 0 311 1 3686 78 99 5 chr2 28029208 28029776 -225226807 - L1MA2 LINE L1 -356 5948 5328 2452 89 0 19 chr2 28029784 28030100 -225226483 - AluSg SINE Alu 0 310 1 447 270 50 117 chr2 28031370 28031610 -225224973 + L1MEd LINE L1 563 817 -5302 1765 153 14 14 chr2 28031610 28031891 -225224692 + AluJo SINE Alu 1 281 -31 447 270 50 117 chr2 28031891 28032171 -225224412 + L1MEd LINE L1 817 1028 -5091 1756 131 0 117 chr2 28032171 28032523 -225224060 + AluJo SINE Alu 1 311 -1 447 270 50 117 chr2 28032523 28032694 -225223889 + L1MEd LINE L1 1028 1209 -4910 2043 132 3 3 chr2 28032769 28033058 -225223525 + AluSg SINE Alu 1 289 -21 1778 159 33 10 chr2 28033069 28033371 -225223212 + AluJo SINE Alu 1 309 -3 327 153 0 42 chr2 28033419 28033491 -225223092 + AluJo SINE Alu 68 136 -166 2373 106 0 0 chr2 28033797 28034099 -225222484 + AluSx SINE Alu 1 302 -10 391 289 0 11 chr2 28034410 28034500 -225222083 - L2 LINE L2 0 3313 3225 2030 97 3 31 chr2 28034626 28034916 -225221667 - AluSg SINE Alu -17 293 12 1826 146 36 7 chr2 28035186 28035488 -225221095 + AluSx SINE Alu 1 311 -1 423 118 15 15 chr2 28035780 28035848 -225220735 + FLAM_A SINE Alu 1 68 -64 195 42 0 0 chr2 28036884 28036908 -225219675 + (CCCCCG)n Simple_repeat Simple_repeat 4 27 0 2334 84 10 0 chr2 28037388 28037685 -225218898 + AluY SINE Alu 1 300 -11 911 177 7 0 chr2 28037696 28037837 -225218746 + AluJb SINE Alu 132 273 -39 459 306 64 61 chr2 28038158 28038393 -225218190 + L1ME4a LINE L1 5256 5495 -2313 2091 103 0 35 chr2 28038393 28038722 -225217861 + AluSc SINE Alu 1 319 0 459 306 64 61 chr2 28038722 28038845 -225217738 + L1ME4a LINE L1 5495 5616 -2192 24 0 0 0 chr2 28038845 28038869 -225217714 + AT_rich Low_complexity Low_complexity 1 24 0 718 267 43 12 chr2 28039284 28039542 -225217041 + L1ME LINE L1 5558 5823 -298 2450 64 3 3 chr2 28039548 28039843 -225216740 + AluY SINE Alu 1 295 -16 457 254 112 76 chr2 28039854 28040157 -225216426 + L1ME4a LINE L1 5785 6098 -23 1746 190 0 7 chr2 28040214 28040519 -225216064 + AluJb SINE Alu 1 303 -9 249 275 132 33 chr2 28040733 28040824 -225215759 - MIR SINE MIR -75 133 34 2120 118 28 0 chr2 28041043 28041330 -225215253 + AluSx SINE Alu 1 295 -17 307 341 64 52 chr2 28042221 28042394 -225214189 - MIR3 SINE MIR -9 199 25 2335 56 0 28 chr2 28044421 28044708 -225211875 - AluY SINE Alu 0 311 33 2376 100 3 0 chr2 28044708 28045008 -225211575 - AluSx SINE Alu -8 304 3 2191 104 35 0 chr2 28045207 28045496 -225211087 + AluSq SINE Alu 1 299 -14 563 269 0 65 chr2 28047293 28047479 -225209104 - MER5B DNA MER1_type -4 174 1 196 323 89 76 chr2 28047671 28047829 -225208754 - L3 LINE CR1 -11 1566 1407 346 304 22 54 chr2 28047842 28048026 -225208557 + MER5B DNA MER1_type 1 178 0 374 259 21 124 chr2 28048768 28048961 -225207622 + MER5A DNA MER1_type 17 189 0 183 345 17 0 chr2 28049061 28049119 -225207464 - L3b LINE CR1 -1 1582 1524 579 156 11 0 chr2 28049150 28049240 -225207343 - MER5A DNA MER1_type -90 99 9 820 164 48 0 chr2 28049267 28049413 -225207170 - MER58B DNA MER1_type -15 326 174 750 129 0 0 chr2 28049418 28049519 -225207064 + AluSx SINE Alu 2 102 -211 1185 120 24 29 chr2 28049568 28049777 -225206806 + AluSx SINE Alu 104 311 -1 2130 114 0 13 chr2 28049793 28050108 -225206475 + AluSx SINE Alu 1 311 -1 334 179 26 171 chr2 28050871 28050988 -225205595 - MER102a DNA MER1_type -10 320 221 274 328 24 40 chr2 28051894 28052019 -225204564 + MIR SINE MIR 71 193 -69 380 255 147 13 chr2 28053574 28053805 -225202778 - MIR SINE MIR 0 262 1 371 263 140 9 chr2 28053911 28054025 -225202558 - MIR SINE MIR -70 192 64 21 0 0 0 chr2 28054054 28054075 -225202508 + AT_rich Low_complexity Low_complexity 1 21 0 392 250 0 0 chr2 28054126 28054202 -225202381 + L2 LINE L2 3196 3271 -1 26 82 0 0 chr2 28054812 28054873 -225201710 + GC_rich Low_complexity Low_complexity 1 61 0 2221 77 3 14 chr2 28056543 28056840 -225199743 + AluSx SINE Alu 10 303 -9 2252 89 3 0 chr2 28058992 28059294 -225197289 + AluSp SINE Alu 1 303 -10 507 268 93 58 chr2 28059512 28059717 -225196866 + MIR SINE MIR 32 243 -19 34 0 0 0 chr2 28059911 28059945 -225196638 + AT_rich Low_complexity Low_complexity 1 34 0 587 282 70 75 chr2 28059945 28060117 -225196466 + L1ME3A LINE L1 2059 2230 -4196 1211 184 23 5 chr2 28060117 28060334 -225196249 - MER58A DNA MER1_type -3 221 1 587 282 70 75 chr2 28060334 28060445 -225196138 + L1ME3A LINE L1 2230 2340 -4086 2020 120 7 0 chr2 28060445 28060737 -225195846 + AluSx SINE Alu 11 304 -8 587 282 70 75 chr2 28060737 28060853 -225195730 + L1ME3A LINE L1 2340 2457 -3969 256 157 14 29 chr2 28060931 28061001 -225195582 + L1ME3A LINE L1 2534 2602 -3824 2707 153 22 24 chr2 28061015 28061473 -225195110 - LTR32 LTR ERVL 0 471 15 516 95 14 14 chr2 28061453 28061527 -225195056 - LTR32 LTR ERVL -383 88 15 * 1961 256 124 19 chr2 28061527 28062534 -225194049 + L1ME3A LINE L1 2612 3724 -2702 594 204 0 9 chr2 28062555 28062663 -225193920 + FLAM_A SINE Alu 12 118 -24 737 285 29 36 chr2 28062715 28062967 -225193616 + L1ME3A LINE L1 3753 4004 -2422 2089 119 0 0 chr2 28062967 28063260 -225193323 + AluJb SINE Alu 1 293 -19 737 285 29 36 chr2 28063260 28063316 -225193267 + L1ME3A LINE L1 4004 4059 -2367 1003 249 29 21 chr2 28063320 28063601 -225192982 + L1ME3A LINE L1 5647 5929 -513 1005 177 22 11 chr2 28063614 28063795 -225192788 + MER5A DNA MER1_type 7 189 0 604 258 72 19 chr2 28063799 28064063 -225192520 + L1ME3A LINE L1 5933 6210 -240 22 0 0 0 chr2 28064076 28064098 -225192485 + AT_rich Low_complexity Low_complexity 1 22 0 196 298 113 26 chr2 28064098 28064249 -225192334 + L2 LINE L2 2203 2366 -948 2219 82 3 0 chr2 28064800 28065091 -225191492 + AluSc SINE Alu 1 292 -17 626 232 148 7 chr2 28066347 28066502 -225190081 - MER5A DNA MER1_type -6 183 7 2160 106 3 0 chr2 28066629 28066932 -225189651 + AluSx SINE Alu 1 304 -8 208 325 63 32 chr2 28066937 28067063 -225189520 - L2 LINE L2 -4 3309 3180 6581 68 15 19 chr2 28067186 28068794 -225187789 - SVA Other Other -683 1386 57 216 0 0 0 chr2 28068794 28068818 -225187765 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 189 0 0 0 chr2 28068918 28068939 -225187644 + (A)n Simple_repeat Simple_repeat 1 21 0 407 258 118 105 chr2 28068965 28069075 -225187508 - L1M4c LINE L1 -4952 1432 1325 536 103 23 11 chr2 28069075 28069162 -225187421 - L1MC1 LINE L1 0 6333 6246 407 258 118 105 chr2 28069162 28069431 -225187152 - L1M4c LINE L1 -5059 1325 1048 24 0 0 0 chr2 28069470 28069494 -225187089 + AT_rich Low_complexity Low_complexity 1 24 0 6216 67 8 68 chr2 28069494 28070502 -225186081 - SVA Other Other -6 1380 433 1239 66 40 13 chr2 28070519 28070745 -225185838 - SVA Other Other -520 866 635 5177 77 28 62 chr2 28070771 28071668 -225184915 - SVA Other Other -520 866 1 407 253 0 0 chr2 28071700 28071779 -225184804 + L2 LINE L2 3193 3271 -1 778 179 39 62 chr2 28071962 28072009 -225184574 - MER3 DNA MER1_type 0 209 162 1620 156 28 10 chr2 28072009 28072298 -225184285 - AluJo SINE Alu -18 294 1 778 179 39 62 chr2 28072298 28072340 -225184243 - MER3 DNA MER1_type -47 162 121 2262 97 7 0 chr2 28072340 28072648 -225183935 + AluSx SINE Alu 1 310 -2 778 179 39 62 chr2 28072648 28072736 -225183847 - MER3 DNA MER1_type -88 121 35 1442 106 75 78 chr2 28073041 28073334 -225183249 + AluSx SINE Alu 3 294 -18 24 67 0 0 chr2 28073526 28073571 -225183012 + AT_rich Low_complexity Low_complexity 1 45 0 1394 203 22 22 chr2 28074426 28074747 -225181836 - L1ME2 LINE L1 -1 6399 6079 2003 126 0 41 chr2 28074754 28075072 -225181511 - AluSx SINE Alu -7 305 1 2116 128 0 0 chr2 28075250 28075547 -225181036 - AluSx SINE Alu -15 297 1 1406 214 52 30 chr2 28075651 28075792 -225180791 - L1ME2 LINE L1 -524 5876 5740 1698 157 44 0 chr2 28075792 28076085 -225180498 - AluSx SINE Alu -4 308 3 1406 214 52 30 chr2 28076085 28076656 -225179927 - L1ME2 LINE L1 -660 5740 5153 743 170 6 29 chr2 28076657 28076755 -225179828 - MER96B DNA MER1_type? -1 416 322 1670 199 3 0 chr2 28076755 28077056 -225179527 - AluJb SINE Alu -10 302 1 743 170 6 29 chr2 28077056 28077128 -225179455 - MER96B DNA MER1_type? -95 322 250 1476 252 43 19 chr2 28077187 28077402 -225179181 - L1ME2 LINE L1 -1225 5157 4949 2090 118 7 3 chr2 28077402 28077699 -225178884 - AluSx SINE Alu -14 298 1 1476 252 43 19 chr2 28077699 28077944 -225178639 - L1ME2 LINE L1 -1433 4949 4686 544 176 47 87 chr2 28077973 28078200 -225178383 - L1MC5 LINE L1 -30 7931 7662 2208 72 41 0 chr2 28078200 28078491 -225178092 - AluY SINE Alu -6 305 3 544 176 47 87 chr2 28078491 28078549 -225178034 - L1MC5 LINE L1 -299 7662 7603 532 156 0 0 chr2 28078552 28078629 -225177954 + AluJ/FLAM SINE Alu 3 79 -233 1366 173 0 50 chr2 28078729 28078836 -225177747 + AluJb SINE Alu 27 138 -174 2205 81 10 0 chr2 28078836 28079133 -225177450 + AluY SINE Alu 1 300 -11 1366 173 0 50 chr2 28079133 28079285 -225177298 + AluJb SINE Alu 138 273 -39 356 306 0 12 chr2 28079618 28079788 -225176795 + L1MC/D LINE L1 5266 5433 -2352 2096 79 4 0 chr2 28080054 28080365 -225176218 - AluY SINE Alu 0 312 1 894 148 7 7 chr2 28080496 28080645 -225175938 - AluJb SINE Alu -26 286 138 1831 135 10 7 chr2 28080655 28080952 -225175631 - AluSx SINE Alu -14 298 1 21 0 0 0 chr2 28080955 28080976 -225175607 + AT_rich Low_complexity Low_complexity 1 21 0 334 115 0 19 chr2 28081402 28081454 -225175129 - MLT1A2 LTR MaLR -323 51 1 696 241 5 9 chr2 28081454 28081666 -225174917 - L1ME2 LINE L1 -2139 4243 4033 311 197 0 16 chr2 28081659 28081720 -225174863 + L1 LINE L1 4092 4151 -1995 * 312 226 3 57 chr2 28081724 28081811 -225174772 - L1ME2 LINE L1 -4649 1733 1664 1466 180 0 8 chr2 28081811 28082067 -225174516 + AluJo SINE Alu 1 254 -58 312 226 3 57 chr2 28082067 28082085 -225174498 - L1ME2 LINE L1 -4718 1664 1647 251 301 49 7 chr2 28082117 28082260 -225174323 - L1ME2 LINE L1 -4769 1615 1467 1985 105 3 14 chr2 28082273 28082569 -225174014 + AluSc SINE Alu 1 293 -16 741 152 37 30 chr2 28082719 28082883 -225173700 + L1MA7 LINE L1 6115 6279 -12 1434 181 61 4 chr2 28082888 28083165 -225173418 - AluSx SINE Alu -19 293 1 290 282 96 91 chr2 28083310 28083469 -225173114 + L1MEd LINE L1 758 920 -5496 2420 50 0 3 chr2 28083469 28083766 -225172817 + AluY SINE Alu 1 296 -15 290 282 96 91 chr2 28083766 28083815 -225172768 + L1MEd LINE L1 920 967 -5449 462 248 48 0 chr2 28083816 28083961 -225172622 - MER104 DNA Tc2 -1 179 28 372 264 46 128 chr2 28083962 28084062 -225172521 + L1MEd LINE L1 863 970 -5456 2292 94 0 3 chr2 28084062 28084370 -225172213 + AluSc SINE Alu 2 308 -1 372 264 46 128 chr2 28084370 28084637 -225171946 + L1MEd LINE L1 970 1200 -5226 316 313 42 42 chr2 28084671 28084815 -225171768 + L1ME LINE L1 46 189 -5881 1066 266 31 65 chr2 28085337 28085700 -225170883 - L1 LINE L1 -1871 4275 3901 2047 134 0 0 chr2 28085700 28086007 -225170576 - AluSx SINE Alu -5 307 1 1066 266 31 65 chr2 28086007 28086167 -225170416 - L1 LINE L1 -2245 3901 3786 2041 132 3 3 chr2 28086167 28086477 -225170106 - AluSx SINE Alu -1 311 2 1066 266 31 65 chr2 28086477 28086653 -225169930 - L1 LINE L1 -2360 3786 3606 2043 136 74 47 chr2 28086781 28087116 -225169467 - MLT2C2 LTR ERVL -48 416 67 2030 98 39 0 chr2 28087116 28087402 -225169181 - AluSc SINE Alu -12 297 1 2043 136 74 47 chr2 28087402 28087471 -225169112 - MLT2C2 LTR ERVL -397 67 1 3398 179 29 8 chr2 28087472 28088308 -225168275 - L1M4 LINE L1 -1091 5055 4107 311 212 0 15 chr2 28088491 28088557 -225168026 - MLT-int LTR MaLR -992 743 679 2141 112 0 3 chr2 28090724 28091020 -225165563 - AluSx SINE Alu -17 295 1 663 161 207 42 chr2 28091020 28091213 -225165370 - MLT1D LTR MaLR -178 327 103 1214 99 0 0 chr2 28091246 28091436 -225165147 + AluSg/x SINE Alu 120 309 0 1911 121 10 0 chr2 28091437 28091734 -225164849 + AluSx SINE Alu 1 300 -12 279 292 44 51 chr2 28092061 28092198 -225164385 + MER5A DNA MER1_type 25 160 -29 967 171 6 12 chr2 28092478 28092642 -225163941 + FRAM SINE Alu 4 166 0 244 185 108 31 chr2 28092644 28092709 -225163874 - L1MB8 LINE L1 -44 6134 6065 897 121 63 35 chr2 28092791 28092965 -225163618 + L1 LINE L1 5126 5304 -842 1278 154 0 9 chr2 28092965 28093179 -225163404 + AluSx SINE Alu 1 212 -100 563 59 0 0 chr2 28093179 28093247 -225163336 + AluSp SINE Alu 78 145 -168 2106 109 3 16 chr2 28093247 28093560 -225163023 + AluSq SINE Alu 1 309 -4 425 73 0 0 chr2 28093567 28093622 -225162961 + L1M LINE L1 5324 5378 -913 303 245 61 150 chr2 28094294 28094343 -225162240 + MIR3 SINE MIR 64 116 -92 2073 73 11 0 chr2 28094343 28094615 -225161968 - AluSq SINE Alu -23 290 16 303 245 61 150 chr2 28094615 28094712 -225161871 + MIR3 SINE MIR 116 197 -11 2178 95 3 0 chr2 28095816 28096110 -225160473 - AluSq SINE Alu -18 295 1 1988 97 0 0 chr2 28097638 28097885 -225158698 - AluY SINE Alu -64 247 1 25 105 0 0 chr2 28103056 28103151 -225153432 + GC_rich Low_complexity Low_complexity 1 95 0 200 219 82 41 chr2 28105162 28105235 -225151348 + MIR SINE MIR 30 105 -103 2437 77 0 46 chr2 28105243 28105570 -225151013 - AluSq SINE Alu 0 313 2 277 349 0 0 chr2 28106368 28106494 -225150089 + CT-rich Low_complexity Low_complexity 2 127 0 2007 104 61 11 chr2 28108993 28109272 -225147311 - AluSg SINE Alu -17 293 1 30 0 0 0 chr2 28109272 28109302 -225147281 + AT_rich Low_complexity Low_complexity 1 30 0 286 283 22 11 chr2 28109709 28109801 -225146782 + GA-rich Low_complexity Low_complexity 3 95 0 2167 123 0 41 chr2 28109931 28110247 -225146336 - AluSx SINE Alu -9 303 1 2273 128 0 0 chr2 28110425 28110722 -225145861 - AluSx SINE Alu -15 297 1 538 214 132 0 chr2 28110825 28110984 -225145599 - L1ME LINE L1 -524 5640 5461 1945 147 3 10 chr2 28111341 28111634 -225144949 + AluSg SINE Alu 1 291 -19 2369 84 7 0 chr2 28111634 28111956 -225144627 + AluSg SINE Alu 1 310 0 407 253 147 13 chr2 28112022 28112116 -225144467 + L1ME4a LINE L1 5878 5958 -163 2317 101 0 3 chr2 28112116 28112412 -225144171 + AluY SINE Alu 1 295 -16 407 253 147 13 chr2 28112412 28112467 -225144116 + L1ME4a LINE L1 5958 6047 -74 190 260 60 0 chr2 28112832 28112882 -225143701 - MIR SINE MIR -6 256 204 2236 109 0 0 chr2 28112940 28113248 -225143335 - AluSq SINE Alu 0 308 1 210 71 0 0 chr2 28113417 28113445 -225143138 + (TA)n Simple_repeat Simple_repeat 2 29 0 2038 130 27 10 chr2 28113445 28113745 -225142838 - AluSx SINE Alu -7 305 1 251 330 58 48 chr2 28114088 28114294 -225142289 + MIR SINE MIR 53 260 -2 36 53 0 0 chr2 28115153 28115210 -225141373 + GC_rich Low_complexity Low_complexity 1 57 0 440 132 0 0 chr2 28116232 28116300 -225140283 - FLAM_A SINE Alu -64 68 1 1811 148 36 7 chr2 28116592 28116895 -225139688 - AluSx SINE Alu 0 312 1 1795 168 0 30 chr2 28117154 28117457 -225139126 + AluY SINE Alu 1 294 -17 370 289 0 11 chr2 28117583 28117673 -225138910 + L2 LINE L2 3225 3313 0 2406 103 0 0 chr2 28117984 28118286 -225138297 - AluSx SINE Alu -10 302 1 333 153 0 42 chr2 28118592 28118664 -225137919 - AluJo SINE Alu -166 136 68 1782 159 33 10 chr2 28118712 28119014 -225137569 - AluJo SINE Alu -3 309 1 2292 103 3 3 chr2 28119025 28119316 -225137267 - AluSx SINE Alu -21 291 1 210 211 14 42 chr2 28123240 28123311 -225133272 + G-rich Low_complexity Low_complexity 3 71 0 2548 59 0 7 chr2 28123728 28124033 -225132550 + AluY SINE Alu 1 303 -8 2276 90 31 0 chr2 28124043 28124332 -225132251 + AluSx SINE Alu 1 298 -14 1720 196 3 0 chr2 28124827 28125118 -225131465 + AluJb SINE Alu 11 302 -10 2547 57 7 0 chr2 28125345 28125643 -225130940 + AluY SINE Alu 1 300 -11 195 286 0 48 chr2 28125791 28125854 -225130729 - L2 LINE L2 -22 3250 3191 2190 129 10 0 chr2 28126131 28126434 -225130149 - AluSx SINE Alu -6 306 1 236 250 36 0 chr2 28128415 28128499 -225128084 + G-rich Low_complexity Low_complexity 2 88 0 202 259 0 0 chr2 28128640 28128694 -225127889 + (CCCCG)n Simple_repeat Simple_repeat 2 55 0 2363 77 13 3 chr2 28129722 28130021 -225126562 + AluSx SINE Alu 1 302 -10 2389 100 0 3 chr2 28130776 28131076 -225125507 - AluSx SINE Alu -11 301 3 1993 114 0 77 chr2 28132627 28132810 -225123773 - AluSx SINE Alu -9 303 154 2823 13 0 31 chr2 28132810 28133127 -225123456 - AluYb8 SINE Alu -11 307 1 1993 114 0 77 chr2 28133127 28133267 -225123316 - AluSx SINE Alu -158 154 5 186 244 0 0 chr2 28133273 28133314 -225123269 + L3b LINE CR1 1534 1574 -9 2491 83 0 10 chr2 28134213 28134527 -225122056 - AluY SINE Alu 0 311 1 785 114 43 137 chr2 28136633 28136720 -225119863 + Charlie5 DNA MER1_type 2355 2449 -136 2178 128 0 3 chr2 28136720 28137018 -225119565 - AluSx SINE Alu -13 299 3 785 114 43 137 chr2 28137018 28137185 -225119398 + Charlie5 DNA MER1_type 2449 2585 0 2307 73 0 11 chr2 28137612 28137936 -225118647 + AluY SINE Alu 1 321 0 34 0 0 0 chr2 28138073 28138107 -225118476 + AT_rich Low_complexity Low_complexity 1 34 0 1457 230 85 41 chr2 28138135 28138595 -225117988 + MLT2B1 LTR ERVL 1 480 -40 1216 165 55 21 chr2 28138602 28138838 -225117745 - Tigger3(Golem) DNA MER2_type 0 3029 2786 429 164 0 0 chr2 28138854 28138921 -225117662 - AluS SINE Alu -242 71 5 278 217 0 0 chr2 28138925 28138971 -225117612 - Tigger3(Golem) DNA MER2_type -2983 46 1 2486 69 0 10 chr2 28141555 28141861 -225114722 + AluY SINE Alu 2 304 -7 2402 83 3 0 chr2 28142059 28142348 -225114235 + AluSc SINE Alu 1 290 -19 2357 115 0 0 chr2 28142890 28143194 -225113389 + AluSx SINE Alu 1 304 -8 2046 133 3 20 chr2 28143415 28143716 -225112867 + AluJb SINE Alu 1 296 -16 8552 52 1 0 chr2 28146106 28147074 -225109509 + LTR5 LTR ERVK 1 969 0 607 154 168 21 chr2 28148097 28148166 -225108417 + MER69A DNA AcHobo 13 71 -2455 2103 116 3 7 chr2 28148166 28148460 -225108123 - AluSx SINE Alu -19 293 1 607 154 168 21 chr2 28148460 28148533 -225108050 + MER69A DNA AcHobo 71 176 -1 1152 299 109 20 chr2 28149363 28149554 -225107029 - L2 LINE L2 0 3313 3140 1412 59 99 59 chr2 28149554 28149775 -225106808 - MER30 DNA MER1_type 0 230 1 1152 299 109 20 chr2 28149775 28150363 -225106220 - L2 LINE L2 -173 3140 2451 526 311 52 52 chr2 28150381 28150629 -225105954 - MIR SINE MIR -11 251 4 1813 164 7 0 chr2 28150739 28151044 -225105539 - AluSx SINE Alu -5 307 1 2293 88 0 0 chr2 28151052 28151347 -225105236 - AluSg SINE Alu -15 295 1 640 264 51 116 chr2 28152617 28152857 -225103726 + L1MEd LINE L1 563 817 -5302 1646 149 14 14 chr2 28152857 28153138 -225103445 + AluJo SINE Alu 1 281 -31 640 264 51 116 chr2 28153138 28153418 -225103165 + L1MEd LINE L1 817 1023 -5096 1664 124 0 104 chr2 28153418 28153765 -225102818 + AluJo SINE Alu 1 311 -1 640 264 51 116 chr2 28153765 28153986 -225102597 + L1MEd LINE L1 1023 1257 -4862 1829 137 0 0 chr2 28154002 28154272 -225102311 + AluY SINE Alu 1 270 -41 2348 70 0 0 chr2 28154544 28154843 -225101740 + AluY SINE Alu 1 299 -12 249 314 94 57 chr2 28155003 28155162 -225101421 + MIR SINE MIR 48 212 -50 216 200 0 0 chr2 28155179 28155229 -225101354 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 1491 181 7 17 chr2 28155633 28155932 -225100651 + AluJo SINE Alu 1 296 -16 1702 147 41 10 chr2 28155977 28156269 -225100314 - AluSq SINE Alu -12 301 1 675 179 43 0 chr2 28156400 28156517 -225100066 + FLAM_C SINE Alu 9 130 -13 4830 157 31 32 chr2 28156597 28157597 -225098986 - L1PA16 LINE L1 0 6166 5171 2319 87 0 3 chr2 28157671 28157980 -225098603 - AluSc SINE Alu -1 308 1 2006 127 3 7 chr2 28158231 28158538 -225098045 - AluSx SINE Alu -1 311 6 2119 80 7 14 chr2 28159544 28159701 -225096882 - AluSx SINE Alu -21 291 135 2150 100 3 3 chr2 28159701 28160011 -225096572 - AluY SINE Alu -1 310 1 2119 80 7 14 chr2 28160011 28160142 -225096441 - AluSx SINE Alu -177 135 5 2152 76 6 45 chr2 28160400 28160714 -225095869 + AluSc SINE Alu 1 302 -7 29 0 0 0 chr2 28160870 28160899 -225095684 + AT_rich Low_complexity Low_complexity 1 29 0 2209 112 0 13 chr2 28160899 28161212 -225095371 + AluSx SINE Alu 3 311 -1 1815 137 11 0 chr2 28161224 28161508 -225095075 + AluSx SINE Alu 26 312 0 1446 194 19 13 chr2 28161510 28161819 -225094764 + AluJo SINE Alu 1 311 -1 1376 168 17 46 chr2 28161830 28161938 -225094645 + L1MB2 LINE L1 5476 5586 -585 2123 87 3 3 chr2 28161938 28162227 -225094356 + AluSx SINE Alu 1 289 -23 1376 168 17 46 chr2 28162227 28162481 -225094102 + L1MB2 LINE L1 5586 5846 -325 2206 104 0 3 chr2 28162481 28162790 -225093793 + AluSx SINE Alu 1 308 -4 1376 168 17 46 chr2 28162790 28162818 -225093765 + L1MB2 LINE L1 5846 6147 -24 1912 137 7 0 chr2 28162823 28163116 -225093467 - AluSp SINE Alu -18 295 1 2074 192 35 12 chr2 28163129 28163609 -225092974 + L1MB7 LINE L1 3473 3963 -2183 1132 159 10 24 chr2 28163610 28163818 -225092765 + AluJo SINE Alu 85 289 -23 232 191 64 0 chr2 28163882 28163929 -225092654 + Alu SINE Alu 115 164 -139 2906 152 124 64 chr2 28163929 28164486 -225092097 + L1MB7 LINE L1 4560 5083 -1063 2413 81 0 0 chr2 28164486 28164794 -225091789 + AluSc SINE Alu 1 308 -1 2906 152 124 64 chr2 28164794 28164811 -225091772 + L1MB7 LINE L1 5083 5098 -1048 1771 112 19 4 chr2 28164811 28165078 -225091505 + AluSx SINE Alu 5 275 -37 2906 152 124 64 chr2 28165078 28165091 -225091492 + L1MB7 LINE L1 5098 5109 -1037 401 0 20 0 chr2 28165091 28165140 -225091443 + (CAA)n Simple_repeat Simple_repeat 2 51 0 2906 152 124 64 chr2 28165140 28165342 -225091241 + L1MB7 LINE L1 5109 5398 -748 1299 134 5 5 chr2 28165348 28165557 -225091026 + AluSx SINE Alu 1 209 -103 2260 164 43 49 chr2 28165581 28166070 -225090513 + L1MB7 LINE L1 5388 5873 -311 1964 131 0 16 chr2 28166071 28166385 -225090198 + AluSx SINE Alu 1 309 -3 766 220 0 0 chr2 28166429 28166570 -225090013 + FLAM_C SINE Alu 2 142 -1 1045 181 65 75 chr2 28167260 28167503 -225089080 + L1MB7 LINE L1 5854 6095 -89 2107 132 0 3 chr2 28167503 28167813 -225088770 + AluSx SINE Alu 4 312 0 1045 181 65 75 chr2 28167813 28167861 -225088722 + L1MB7 LINE L1 6095 6142 -42 2016 75 11 14 chr2 28168481 28168828 -225087755 + AluY SINE Alu 1 346 0 632 148 129 77 chr2 28168834 28168989 -225087594 + AluJo SINE Alu 86 248 -64 237 143 48 0 chr2 28169050 28169092 -225087491 + AluJo SINE Alu 247 290 -12 23 0 0 0 chr2 28169095 28169118 -225087465 + AT_rich Low_complexity Low_complexity 1 23 0 1988 132 0 7 chr2 28169118 28169421 -225087162 + AluSq SINE Alu 1 301 -12 1721 141 44 3 chr2 28169561 28169858 -225086725 + AluSx SINE Alu 1 309 -3 1947 121 3 17 chr2 28170222 28170520 -225086063 + AluSg SINE Alu 1 294 -16 2253 90 0 3 chr2 28170619 28170930 -225085653 + AluSg SINE Alu 1 310 0 288 313 75 52 chr2 28170977 28171162 -225085421 + L1MEc LINE L1 1520 1716 -4680 2087 127 3 0 chr2 28171162 28171469 -225085114 + AluSx SINE Alu 1 308 -4 288 313 75 52 chr2 28171469 28171590 -225084993 + L1MEc LINE L1 1716 1833 -4563 1903 116 7 14 chr2 28171605 28171898 -225084685 + AluSx SINE Alu 5 295 -17 883 185 10 36 chr2 28172141 28172395 -225084188 + AluJo SINE Alu 123 371 0 2054 95 3 30 chr2 28173800 28174104 -225082479 + AluSx SINE Alu 2 297 -15 296 132 2 0 chr2 28175122 28175175 -225081408 + Alu SINE Alu 1 40 -259 1459 68 16 0 chr2 28175305 28175496 -225081087 - AluY SINE Alu -117 194 1 2190 110 3 0 chr2 28175684 28175992 -225080591 - AluSq SINE Alu -4 309 1 274 284 98 10 chr2 28175995 28176097 -225080486 - MIR SINE MIR -57 151 41 559 262 168 38 chr2 28176192 28176425 -225080158 + L1P4 LINE L1 4827 5028 -1137 2344 93 0 0 chr2 28176425 28176736 -225079847 - AluSq SINE Alu -2 311 1 559 262 168 38 chr2 28176736 28177230 -225079353 + L1P4 LINE L1 5028 5659 -506 690 115 10 0 chr2 28177385 28177481 -225079102 - U6 snRNA snRNA -7 100 4 489 223 174 8 chr2 28177545 28177666 -225078917 - MIR SINE MIR -102 160 20 881 135 23 0 chr2 28177683 28177816 -225078767 - AluJo SINE Alu -176 136 1 260 154 0 0 chr2 28178002 28178041 -225078542 + MIR3 SINE MIR 167 205 -3 778 232 18 12 chr2 28178151 28178315 -225078268 - FRAM SINE Alu 0 166 2 1760 150 0 11 chr2 28178700 28179009 -225077574 - AluJb SINE Alu 0 306 1 714 204 0 0 chr2 28180378 28180491 -225076092 - FLAM_A SINE Alu -29 113 1 321 347 41 14 chr2 28180495 28180642 -225075941 + L2 LINE L2 3121 3271 -1 2323 78 0 3 chr2 28180892 28181188 -225075395 - AluY SINE Alu -16 295 1 384 22 0 0 chr2 28183308 28183353 -225073230 + (CA)n Simple_repeat Simple_repeat 1 45 0 2218 95 7 3 chr2 28183416 28183720 -225072863 - AluSg SINE Alu -4 306 2 2129 100 3 0 chr2 28183864 28184165 -225072418 - AluSx SINE Alu -10 302 1 1825 100 30 7 chr2 28184176 28184447 -225072136 - AluSq SINE Alu -16 297 21 1429 139 0 54 chr2 28184884 28185142 -225071441 - AluJb SINE Alu -11 301 58 2296 60 0 0 chr2 28186192 28186495 -225070088 + AluY SINE Alu 1 303 0 232 274 0 0 chr2 28187023 28187085 -225069498 + A-rich Low_complexity Low_complexity 1 62 0 255 220 90 40 chr2 28187718 28187818 -225068765 - L2 LINE L2 -3 3310 3206 1941 142 7 7 chr2 28188823 28189126 -225067457 - AluSx SINE Alu -9 303 1 772 265 29 20 chr2 28189264 28189468 -225067115 - MIR SINE MIR 0 262 57 1964 106 32 0 chr2 28189483 28189766 -225066817 - AluSx SINE Alu -20 292 1 1270 151 114 41 chr2 28189873 28190041 -225066542 - AluJb SINE Alu -21 291 94 2233 82 3 0 chr2 28190041 28190335 -225066248 - AluSq SINE Alu -18 295 1 1270 151 114 41 chr2 28190335 28190437 -225066146 - AluJb SINE Alu -218 94 1 1140 101 23 105 chr2 28190702 28190921 -225065662 + AluSg/x SINE Alu 85 285 -27 204 298 0 18 chr2 28190991 28191048 -225065535 - MIR SINE MIR -132 76 21 237 306 41 50 chr2 28191875 28191996 -225064587 - MIR SINE MIR -69 193 74 503 267 92 63 chr2 28192009 28192215 -225064368 - MIR SINE MIR -19 243 32 239 171 24 0 chr2 28192528 28192569 -225064014 + MIR SINE MIR 108 149 -59 1898 130 7 0 chr2 28192571 28192864 -225063719 + AluSp SINE Alu 2 296 -17 27 0 0 0 chr2 28193682 28193709 -225062874 + AT_rich Low_complexity Low_complexity 1 27 0 2077 44 106 0 chr2 28195291 28195565 -225061018 - AluY SINE Alu -8 303 1 705 76 0 0 chr2 28195570 28195662 -225060921 - AluSp/q SINE Alu -17 296 205 26 0 0 0 chr2 28196268 28196294 -225060289 + AT_rich Low_complexity Low_complexity 1 26 0 847 144 144 34 chr2 28197870 28198106 -225058477 - AluY SINE Alu -8 303 42 308 83 42 0 chr2 28198211 28198259 -225058324 + Alu SINE Alu 247 296 -4 280 303 104 74 chr2 28198445 28198676 -225057907 + L2 LINE L2 3076 3313 0 199 275 67 33 chr2 28198664 28198784 -225057799 - L2 LINE L2 -844 2470 2347 * 578 136 0 0 chr2 28198936 28199024 -225057559 + AluSg/x SINE Alu 216 303 -7 186 200 0 0 chr2 28199047 28199085 -225057498 + CT-rich Low_complexity Low_complexity 3 43 -4 716 229 0 0 chr2 28199085 28199207 -225057376 - FLAM_A SINE Alu -9 124 3 213 121 0 0 chr2 28199209 28199242 -225057341 + (T)n Simple_repeat Simple_repeat 1 33 0 390 319 80 0 chr2 28199295 28199433 -225057150 + MIR SINE MIR 66 214 -48 1014 102 0 0 chr2 28199611 28199739 -225056844 + AluSq/x SINE Alu 1 128 -184 2673 49 0 3 chr2 28199989 28200296 -225056287 + AluY SINE Alu 1 306 -5 2097 126 3 32 chr2 28200455 28200567 -225056016 + AluSx SINE Alu 4 118 -194 2188 103 14 0 chr2 28200567 28200859 -225055724 + AluSg SINE Alu 1 296 -14 2097 126 3 32 chr2 28200859 28201056 -225055527 + AluSx SINE Alu 118 304 -8 2258 95 0 0 chr2 28201139 28201424 -225055159 + AluSx SINE Alu 5 289 -23 27 0 0 0 chr2 28201557 28201584 -225054999 + AT_rich Low_complexity Low_complexity 1 27 0 500 156 0 0 chr2 28201587 28201664 -225054919 - FLAM_A SINE Alu -35 107 31 402 77 0 0 chr2 28202094 28202146 -225054437 + Alu SINE Alu 246 297 -15 561 301 17 7 chr2 28202146 28202442 -225054141 - L1M4 LINE L1 -1577 4569 4271 364 273 8 8 chr2 28202494 28202626 -225053957 - L1M4 LINE L1 -2685 3461 3330 1953 125 3 77 chr2 28202627 28202807 -225053776 - AluJb SINE Alu -1 311 166 2299 107 0 3 chr2 28202807 28203105 -225053478 - AluSx SINE Alu -15 297 1 1953 125 3 77 chr2 28203105 28203260 -225053323 - AluJb SINE Alu -146 166 1 1089 299 98 27 chr2 28203280 28203779 -225052804 - L1MEd LINE L1 -5492 627 90 2143 96 50 0 chr2 28203779 28204059 -225052524 + AluSx SINE Alu 1 294 -18 1089 299 98 27 chr2 28204059 28204070 -225052513 - L1MEd LINE L1 -6029 90 81 420 189 142 0 chr2 28205132 28205238 -225051345 + MIR3 SINE MIR 44 164 -44 189 147 0 0 chr2 28205688 28205722 -225050861 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 1956 116 7 3 chr2 28257857 28258160 -224998423 + AluSx SINE Alu 5 308 -4 25 51 0 0 chr2 28258680 28258719 -224997864 + GC_rich Low_complexity Low_complexity 1 39 0 860 273 71 33 chr2 28259267 28259466 -224997117 - L1MC/D LINE L1 -2160 5648 5458 1821 142 10 3 chr2 28259466 28259762 -224996821 + AluJo SINE Alu 1 298 -14 860 273 71 33 chr2 28259762 28259929 -224996654 - L1MC/D LINE L1 -2350 5458 5268 1495 189 43 0 chr2 28259940 28260220 -224996363 - AluJo SINE Alu -20 292 1 247 219 16 0 chr2 28260624 28260688 -224995895 + L1ME LINE L1 5713 5777 -344 1331 139 33 0 chr2 28260690 28260905 -224995678 + AluSc SINE Alu 1 222 -87 185 83 28 0 chr2 28260917 28260953 -224995630 + (CAAAAA)n Simple_repeat Simple_repeat 4 40 0 306 0 0 0 chr2 28260967 28261001 -224995582 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1740 171 0 10 chr2 28262598 28262903 -224993680 - AluJo SINE Alu -10 302 1 346 281 110 48 chr2 28262950 28263274 -224993309 - L1MC/D LINE L1 -1360 4786 4431 23 0 0 0 chr2 28263332 28263355 -224993228 + AT_rich Low_complexity Low_complexity 1 23 0 1360 171 0 0 chr2 28263372 28263606 -224992977 - AluSx SINE Alu -22 290 57 282 221 26 26 chr2 28264177 28264254 -224992329 - L2 LINE L2 -1 3271 3195 440 231 97 22 chr2 28264295 28264429 -224992154 - MIR SINE MIR -82 180 37 260 298 137 23 chr2 28265685 28265816 -224990767 - L2 LINE L2 -8 3305 3160 181 239 0 60 chr2 28265974 28266041 -224990542 + L2 LINE L2 1696 1758 -1556 2014 104 0 4 chr2 28266190 28266468 -224990115 + AluSg SINE Alu 1 277 -33 473 147 53 11 chr2 28266571 28266666 -224989917 - AluSg/x SINE Alu -6 306 208 404 212 0 62 chr2 28266725 28266904 -224989679 + C-rich Low_complexity Low_complexity 3 170 0 912 174 99 36 chr2 28267098 28267351 -224989232 - AluJo SINE Alu -43 269 1 325 213 37 29 chr2 28268863 28268999 -224987584 + G-rich Low_complexity Low_complexity 5 141 0 1463 173 19 0 chr2 28269064 28269324 -224987259 - L1MA7 LINE L1 -69 6222 5958 333 47 0 0 chr2 28271302 28271345 -224985238 + (CA)n Simple_repeat Simple_repeat 1 43 0 189 321 67 61 chr2 28271416 28271454 -224985129 - L2 LINE L2 -22 3250 3214 228 67 0 0 chr2 28271454 28271484 -224985099 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 189 321 67 61 chr2 28271484 28271610 -224984973 - L2 LINE L2 -58 3214 3085 193 319 32 64 chr2 28271956 28272050 -224984533 - MIR3 SINE MIR -17 191 101 2004 105 3 10 chr2 28272132 28272427 -224984156 + AluSq SINE Alu 1 293 -20 25 51 0 0 chr2 28272463 28272502 -224984081 + AT_rich Low_complexity Low_complexity 1 39 0 1289 103 5 26 chr2 28273236 28273430 -224983153 + AluY SINE Alu 101 290 -21 24 0 0 0 chr2 28273430 28273454 -224983129 + AT_rich Low_complexity Low_complexity 1 24 0 2161 111 10 0 chr2 28273473 28273779 -224982804 - AluSg SINE Alu -1 309 1 712 282 75 34 chr2 28273930 28274288 -224982295 - HAL1 LINE L1 -440 2067 1695 1721 243 115 69 chr2 28274348 28275440 -224981143 - HAL1 LINE L1 -749 1758 616 3090 198 72 37 chr2 28275673 28275936 -224980647 - L1MC4 LINE L1 0 8042 7790 1571 147 11 39 chr2 28275936 28276221 -224980362 - AluJo SINE Alu -14 298 22 3090 198 72 37 chr2 28276221 28276801 -224979782 - L1MC4 LINE L1 -252 7790 7169 831 193 30 24 chr2 28276805 28276971 -224979612 - FRAM SINE Alu -9 167 1 644 296 53 14 chr2 28277222 28277438 -224979145 - MIR SINE MIR -21 241 16 548 300 78 33 chr2 28278007 28278187 -224978396 - MIR3 SINE MIR -4 204 17 433 243 176 91 chr2 28278233 28278529 -224978054 + MER102b DNA MER1_type 21 341 0 424 281 100 20 chr2 28279028 28279277 -224977306 - L2 LINE L2 -798 2516 2248 600 275 47 19 chr2 28279508 28279719 -224976864 + L1ME LINE L1 5523 5739 -431 642 255 115 32 chr2 28279846 28280124 -224976459 + MLT1J2 LTR MaLR 121 421 -29 275 145 101 14 chr2 28280143 28280212 -224976371 + L1ME LINE L1 5743 5817 -345 1603 184 7 13 chr2 28280258 28280557 -224976026 + AluJb SINE Alu 1 297 -15 622 297 152 49 chr2 28280582 28281091 -224975492 + L2 LINE L2 2446 3051 -262 31 0 0 0 chr2 28282040 28282071 -224974512 + AT_rich Low_complexity Low_complexity 1 31 0 238 317 37 0 chr2 28283399 28283481 -224973102 - L2 LINE L2 -601 2713 2629 236 287 17 26 chr2 28283595 28283710 -224972873 + L1MC/D LINE L1 5772 5885 -2157 252 283 33 11 chr2 28284047 28284139 -224972444 + L1ME LINE L1 110 203 -5867 1268 268 62 49 chr2 28284500 28285086 -224971497 + L1ME LINE L1 391 989 -5081 2118 72 3 78 chr2 28285086 28285419 -224971164 + AluSg SINE Alu 3 310 0 1268 268 62 49 chr2 28285419 28285522 -224971061 + L1ME LINE L1 989 1089 -4981 4029 110 19 19 chr2 28285543 28286208 -224970375 + SVA Other Other 13 677 -709 892 83 38 0 chr2 28286313 28286445 -224970138 - AluSq/x SINE Alu -175 137 1 187 277 62 15 chr2 28286787 28286852 -224969731 + MIR SINE MIR 79 146 -116 1660 116 33 0 chr2 28286852 28287125 -224969458 - AluSx SINE Alu 0 315 35 222 91 0 0 chr2 28288192 28288225 -224968358 + (TG)n Simple_repeat Simple_repeat 2 34 0 245 208 228 30 chr2 28288922 28289023 -224967560 - L2 LINE L2 -2 3270 3150 580 256 8 0 chr2 28289228 28289353 -224967230 - MIR3 SINE MIR -48 160 35 203 356 13 13 chr2 28289884 28290033 -224966550 + C-rich Low_complexity Low_complexity 1 149 0 647 265 41 20 chr2 28290540 28290736 -224965847 - MIR SINE MIR -51 211 12 381 278 80 20 chr2 28291247 28291398 -224965185 - MIR SINE MIR 0 262 103 287 158 123 0 chr2 28291693 28291750 -224964833 - L1ME LINE L1 -456 5665 5602 1778 102 37 0 chr2 28291801 28292047 -224964536 - AluSx SINE Alu -46 266 12 667 252 105 58 chr2 28292060 28292421 -224964162 + L1ME4a LINE L1 5549 5926 -195 2107 108 10 0 chr2 28292492 28292797 -224963786 - AluSx SINE Alu -4 308 1 1084 218 36 45 chr2 28292893 28293037 -224963546 + L1MA4 LINE L1 5991 6135 -165 1592 133 23 77 chr2 28293037 28293166 -224963417 + AluSx SINE Alu 1 135 -172 2232 72 7 7 chr2 28293166 28293471 -224963112 + AluY SINE Alu 1 305 -6 1592 133 23 77 chr2 28293471 28293664 -224962919 + AluSx SINE Alu 135 307 0 1084 218 36 45 chr2 28293664 28293826 -224962757 + L1MA4 LINE L1 6135 6295 -5 1410 196 19 11 chr2 28293899 28294165 -224962418 - REP3 LTR ERV -294 268 1 314 214 21 100 chr2 28294167 28294211 -224962372 + HAL1 LINE L1 2303 2349 -158 1418 186 3 20 chr2 28294211 28294535 -224962048 + AluJb SINE Alu 1 319 0 314 214 21 100 chr2 28294535 28294627 -224961956 + HAL1 LINE L1 2349 2431 -76 * 379 153 0 0 chr2 28294617 28294676 -224961907 - L1M2 LINE L1 -535 5756 5698 * 725 236 75 80 chr2 28294670 28295169 -224961414 - L1MC5 LINE L1 -869 6939 6414 477 128 37 28 chr2 28295383 28295492 -224961091 + Alu SINE Alu 2 111 -200 242 299 153 28 chr2 28296201 28296345 -224960238 - MIR3 SINE MIR -32 176 15 261 283 160 0 chr2 28297668 28297774 -224958809 + L2 LINE L2 3142 3264 -8 232 270 54 40 chr2 28297805 28297879 -224958704 - L2 LINE L2 -13 3259 3185 472 299 148 27 chr2 28298732 28299063 -224957520 - L2 LINE L2 -3 3310 2940 2234 97 7 0 chr2 28299453 28299752 -224956831 - AluSx SINE Alu -11 301 1 340 170 19 0 chr2 28299868 28299921 -224956662 - Alu SINE Alu -247 55 2 1654 199 22 60 chr2 28299926 28300373 -224956210 - L1ME LINE L1 -483 5683 5254 372 184 80 8 chr2 28300374 28300499 -224956084 - L1ME LINE L1 -944 5202 5069 2219 92 7 0 chr2 28300503 28300806 -224955777 - AluSx SINE Alu -7 305 1 1556 229 66 18 chr2 28300811 28301204 -224955379 - MLT1E2 LTR MaLR 0 626 215 639 183 14 21 chr2 28301206 28301348 -224955235 - MLT2C1 LTR ERVL -256 141 1 690 214 0 0 chr2 28301350 28301495 -224955088 - L1ME LINE L1 -1072 5074 4930 2094 125 0 0 chr2 28301517 28301813 -224954770 - AluSq SINE Alu -17 296 1 2205 107 0 3 chr2 28302974 28303284 -224953299 + AluSc SINE Alu 1 309 0 1717 125 3 56 chr2 28303595 28303733 -224952850 + AluSg SINE Alu 1 116 -194 1961 135 3 0 chr2 28303733 28304030 -224952553 + AluSq SINE Alu 1 298 -15 1717 125 3 56 chr2 28304030 28304194 -224952389 + AluSg SINE Alu 116 287 -23 189 0 0 0 chr2 28304203 28304224 -224952359 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1817 122 16 7 chr2 28304230 28304533 -224952050 + AluY SINE Alu 2 307 -4 1531 161 6 54 chr2 28304835 28305151 -224951432 - AluJb SINE Alu -11 301 1 754 218 18 12 chr2 28306033 28306198 -224950385 - MIR3 SINE MIR -7 201 36 2304 57 0 0 chr2 28306864 28307168 -224949415 - AluY SINE Alu 0 304 1 660 220 16 81 chr2 28308203 28308389 -224948194 - MIR3 SINE MIR -16 192 19 429 194 313 15 chr2 28308495 28308629 -224947954 - MER5A DNA MER1_type -12 177 4 508 307 56 6 chr2 28308642 28308821 -224947762 + MIR SINE MIR 29 216 -46 876 320 52 41 chr2 28308970 28309411 -224947172 - L2 LINE L2 -1 3271 2826 993 55 0 0 chr2 28309427 28309554 -224947029 + AluY SINE Alu 171 297 -14 2140 108 3 7 chr2 28310683 28310988 -224945595 + AluSx SINE Alu 1 304 -8 360 196 38 15 chr2 28312035 28312117 -224944466 - MER5A DNA MER1_type -80 105 18 1985 128 0 0 chr2 28312138 28312434 -224944149 + AluSx SINE Alu 1 296 -16 648 211 88 14 chr2 28312454 28312539 -224944044 + MER5A DNA MER1_type 29 106 -83 1845 140 7 7 chr2 28312539 28312832 -224943751 - AluJo SINE Alu -19 293 1 648 211 88 14 chr2 28312832 28312893 -224943690 + MER5A DNA MER1_type 106 186 -3 1941 111 10 39 chr2 28313004 28313172 -224943411 - AluSc SINE Alu -12 297 140 2185 95 3 0 chr2 28313172 28313468 -224943115 - AluSp SINE Alu -8 305 9 1941 111 10 39 chr2 28313468 28313605 -224942978 - AluSc SINE Alu -169 140 1 330 233 133 11 chr2 28313606 28313696 -224942887 + L2 LINE L2 3212 3312 -1 2270 100 0 3 chr2 28314787 28315096 -224941487 - AluSx SINE Alu 0 312 5 2271 99 0 3 chr2 28315448 28315762 -224940821 - AluSq SINE Alu 0 313 1 2062 121 0 3 chr2 28316698 28316995 -224939588 - AluSx SINE Alu -16 296 1 2074 133 3 0 chr2 28318043 28318352 -224938231 + AluSx SINE Alu 1 310 -2 1703 171 0 16 chr2 28318361 28318666 -224937917 - AluJo SINE Alu -12 300 1 313 287 11 11 chr2 28318789 28318876 -224937707 + MIR SINE MIR 15 101 -161 1664 130 4 0 chr2 28318878 28319181 -224937402 - AluSc SINE Alu 0 328 25 756 132 0 39 chr2 28319220 28319349 -224937234 + AluSg/x SINE Alu 186 309 0 670 237 0 7 chr2 28319350 28319502 -224937081 + MIR SINE MIR 111 261 -1 326 276 0 58 chr2 28320029 28320116 -224936467 - L2 LINE L2 -7 3306 3225 1882 152 3 10 chr2 28320116 28320419 -224936164 - AluSx SINE Alu -10 302 2 306 306 27 54 chr2 28320663 28320774 -224935809 + MLT1K LTR MaLR 141 248 -340 26 50 0 0 chr2 28320798 28320838 -224935745 + AT_rich Low_complexity Low_complexity 1 40 0 28 61 0 0 chr2 28320963 28321012 -224935571 + AT_rich Low_complexity Low_complexity 1 49 0 598 321 62 22 chr2 28321047 28321445 -224935138 - L1MC4a LINE L1 -370 5987 5726 245 280 0 13 chr2 28321691 28321766 -224934817 + MLT1K LTR MaLR 500 573 -15 192 200 0 0 chr2 28322112 28322157 -224934426 + A-rich Low_complexity Low_complexity 1 45 0 194 289 66 86 chr2 28322513 28322665 -224933918 - MIR SINE MIR -33 229 81 492 233 0 0 chr2 28323061 28323147 -224933436 + L2 LINE L2 3223 3308 -5 283 234 47 111 chr2 28323643 28323799 -224932784 + MIR3 SINE MIR 51 192 -54 1967 126 3 0 chr2 28323806 28324121 -224932462 + AluSx SINE Alu 1 312 0 2141 130 0 0 chr2 28324123 28324431 -224932152 + AluSx SINE Alu 1 308 -4 888 150 21 42 chr2 28324996 28325189 -224931394 + MER53 DNA DNA 1 189 0 276 333 30 22 chr2 28325831 28325966 -224930617 + L2 LINE L2 2652 2787 -527 1758 155 0 7 chr2 28326913 28327210 -224929373 - AluSx SINE Alu -17 295 1 2151 96 10 0 chr2 28327309 28327612 -224928971 - AluSp SINE Alu -7 306 1 2624 198 112 105 chr2 28327614 28327888 -224928695 - L1MC4a LINE L1 -753 5629 5359 548 155 0 21 chr2 28327888 28327985 -224928598 + AluSg/x SINE Alu 212 306 -3 2624 198 112 105 chr2 28327985 28328824 -224927759 - L1MC4a LINE L1 -1023 5359 4411 4463 233 66 16 chr2 28328847 28330288 -224926295 - L1M4c LINE L1 -2599 3783 2303 614 152 124 35 chr2 28330303 28330448 -224926135 - AluJo SINE Alu -18 294 137 591 259 161 0 chr2 28330452 28330657 -224925926 - L1M4c LINE L1 -4598 1965 1728 1011 189 0 0 chr2 28330658 28330838 -224925745 - AluJo SINE Alu -1 311 132 23 0 0 29 chr2 28330840 28330855 -224925728 + AT_rich Low_complexity Low_complexity 1 15 -18 1365 74 16 0 chr2 28330855 28331045 -224925538 - L1MA1 LINE L1 0 6302 6110 23 0 0 29 chr2 28331045 28331063 -224925520 + AT_rich Low_complexity Low_complexity 15 33 0 2068 86 18 0 chr2 28331063 28331341 -224925242 - AluSc SINE Alu -26 283 1 798 117 36 0 chr2 28331348 28331459 -224925124 - AluJo SINE Alu -185 127 13 327 217 48 12 chr2 28331488 28331571 -224925012 - L1M4c LINE L1 -4706 1676 1591 1632 172 3 7 chr2 28331632 28331922 -224924661 - AluJb SINE Alu -23 289 1 1996 113 3 14 chr2 28331953 28332246 -224924337 - AluSx SINE Alu -22 290 1 2323 86 3 3 chr2 28332303 28332616 -224923967 - AluSp SINE Alu 0 313 1 1520 174 71 3 chr2 28332710 28332827 -224923756 + AluJb SINE Alu 1 109 -203 459 0 0 0 chr2 28332827 28332878 -224923705 + (CA)n Simple_repeat Simple_repeat 2 52 0 1520 174 71 3 chr2 28332878 28333042 -224923541 + AluJb SINE Alu 109 301 -11 1028 197 19 9 chr2 28333050 28333263 -224923320 + AluJo SINE Alu 83 297 -15 433 225 48 12 chr2 28333263 28333424 -224923159 - L1M4c LINE L1 -4851 1531 1273 2615 118 83 59 chr2 28333426 28333968 -224922615 - SVA Other Other -263 1123 569 2012 109 10 13 chr2 28334106 28334417 -224922166 + AluSq SINE Alu 1 310 -3 2368 82 7 0 chr2 28334426 28334731 -224921852 + AluSc SINE Alu 1 307 -2 1487 173 43 22 chr2 28334923 28335200 -224921383 + REP3 LTR ERV 263 545 -17 1510 277 153 35 chr2 28335266 28336094 -224920489 - HAL1 LINE L1 -300 2207 1243 521 64 13 0 chr2 28336094 28336172 -224920411 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 1510 277 153 35 chr2 28336172 28336330 -224920253 - HAL1 LINE L1 -1264 1243 1105 1010 177 0 0 chr2 28336336 28336500 -224920083 - FRAM SINE Alu -12 164 1 736 226 39 87 chr2 28336504 28336814 -224919769 - HAL1 LINE L1 -1423 1084 790 439 227 98 0 chr2 28337138 28337301 -224919282 + L1ME4a LINE L1 5930 6108 -13 2106 110 0 3 chr2 28337302 28337592 -224918991 + AluSc SINE Alu 1 289 -20 186 71 0 0 chr2 28337654 28337682 -224918901 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1456 157 52 35 chr2 28337684 28337971 -224918612 - AluJo SINE Alu -20 292 1 721 302 43 21 chr2 28337992 28338227 -224918356 - MIR SINE MIR 0 262 23 2494 67 0 0 chr2 28338306 28338618 -224917965 + AluSq SINE Alu 1 312 -1 988 182 0 0 chr2 28338618 28338788 -224917795 + AluSg/x SINE Alu 133 302 -8 467 204 0 82 chr2 28338796 28338820 -224917763 - L1MC4 LINE L1 -5 8037 8013 2933 65 16 5 chr2 28338820 28339191 -224917392 - THE1C LTR MaLR 0 375 1 467 204 0 82 chr2 28339191 28339313 -224917270 - L1MC4 LINE L1 -29 8013 7903 189 0 0 0 chr2 28339319 28339340 -224917243 + (TTA)n Simple_repeat Simple_repeat 3 23 0 361 170 7 92 chr2 28339341 28339436 -224917147 - L1ME1 LINE L1 -54 6112 6010 1794 134 39 16 chr2 28339436 28339741 -224916842 + AluJo SINE Alu 1 312 0 361 170 7 92 chr2 28339741 28340223 -224916360 - L1ME1 LINE L1 -156 6010 5587 1257 176 178 33 chr2 28340228 28340587 -224915996 - L1MC4 LINE L1 -131 7911 7501 231 36 0 0 chr2 28341913 28341941 -224914642 + (TAA)n Simple_repeat Simple_repeat 2 29 0 693 282 75 25 chr2 28341942 28342183 -224914400 - MIR SINE MIR -8 254 2 2028 158 47 30 chr2 28342195 28342601 -224913982 - L1MC1 LINE L1 -5 6328 5916 1619 178 3 10 chr2 28342611 28342904 -224913679 - AluJo SINE Alu -21 291 1 1824 162 7 0 chr2 28343045 28343348 -224913235 + AluJb SINE Alu 1 305 -7 365 262 90 33 chr2 28344492 28344614 -224911969 + MIR SINE MIR 106 234 -28 2112 121 26 9 chr2 28344700 28345039 -224911544 - L1MC1 LINE L1 0 6333 5989 221 256 158 65 chr2 28345082 28345328 -224911255 + L2 LINE L2 3034 3302 -11 337 282 51 54 chr2 28346100 28346166 -224910417 - MIR3 SINE MIR -57 151 86 2004 132 10 0 chr2 28346166 28346470 -224910113 + AluSx SINE Alu 3 309 -3 337 282 51 54 chr2 28346470 28346579 -224910004 - MIR3 SINE MIR -122 86 6 211 183 17 52 chr2 28346971 28347086 -224909497 + (CATATA)n Simple_repeat Simple_repeat 3 113 0 1832 86 10 66 chr2 28347108 28347163 -224909420 - L1PB2 LINE L1 -1 6150 6093 798 135 16 24 chr2 28347163 28347289 -224909294 - FLAM_C SINE Alu -5 128 4 1832 86 10 66 chr2 28347289 28347537 -224909046 - L1PB2 LINE L1 -58 6093 5864 341 223 45 0 chr2 28347548 28347660 -224908923 - MER113 DNA MER1_type? -400 121 5 238 299 72 28 chr2 28347694 28347813 -224908770 + MIR SINE MIR 38 163 -66 2020 105 7 7 chr2 28348510 28348805 -224907778 - AluSx SINE Alu -17 295 1 226 250 0 0 chr2 28348914 28348962 -224907621 - L2 LINE L2 0 3313 3266 299 319 72 18 chr2 28349856 28350022 -224906561 + MIR3 SINE MIR 12 186 -22 637 319 73 18 chr2 28350284 28350613 -224905970 + L2 LINE L2 2897 3243 -70 364 268 27 27 chr2 28350673 28350785 -224905798 - MIR SINE MIR -56 206 95 882 174 0 0 chr2 28358393 28358537 -224898046 + MER3 DNA MER1_type 1 144 -65 1228 169 40 0 chr2 28358583 28358784 -224897799 + MER3 DNA MER1_type 1 209 0 385 328 195 22 chr2 28359075 28359660 -224896923 - L2 LINE L2 0 3272 2596 215 269 51 13 chr2 28359876 28359954 -224896629 - L2 LINE L2 -1036 2278 2198 225 324 65 53 chr2 28360011 28360181 -224896402 + MER5B DNA MER1_type 1 172 -6 1499 171 22 4 chr2 28360851 28361158 -224895425 - AluSx SINE Alu 0 315 4 207 264 81 11 chr2 28361388 28361475 -224895108 - MIR SINE MIR -169 93 1 279 247 71 0 chr2 28362370 28362455 -224894128 + MIR SINE MIR 162 252 -10 1121 119 6 62 chr2 28362575 28362751 -224893832 - AluSp SINE Alu -147 166 1 542 306 110 5 chr2 28363758 28363967 -224892616 + MIR SINE MIR 13 243 -19 288 263 86 91 chr2 28364512 28364744 -224891839 + MIR SINE MIR 2 232 -30 2024 87 13 33 chr2 28365080 28365237 -224891346 - AluSx SINE Alu -19 293 143 2167 99 7 7 chr2 28365237 28365540 -224891043 - AluSp SINE Alu -5 308 6 2024 87 13 33 chr2 28365540 28365681 -224890902 - AluSx SINE Alu -169 143 1 30 27 0 0 chr2 28367134 28367171 -224889412 + AT_rich Low_complexity Low_complexity 1 37 0 1754 150 16 33 chr2 28367188 28367495 -224889088 - AluJo SINE Alu -10 302 1 210 37 0 0 chr2 28367496 28367523 -224889060 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 2247 101 0 0 chr2 28367537 28367824 -224888759 - AluSx SINE Alu -25 287 1 1029 220 24 65 chr2 28367914 28368096 -224888487 - L1ME1 LINE L1 -5 6161 6059 1846 169 10 0 chr2 28368096 28368392 -224888191 + AluJo SINE Alu 1 299 -13 1029 220 24 65 chr2 28368392 28368536 -224888047 - L1ME1 LINE L1 -107 6059 5911 348 310 54 0 chr2 28369498 28369627 -224886956 - L2 LINE L2 0 3272 3137 258 304 7 34 chr2 28369655 28369803 -224886780 - L1M4 LINE L1 -3655 2491 2348 891 179 43 16 chr2 28369805 28369989 -224886594 + L1MC4a LINE L1 5744 5932 -1876 2426 91 0 3 chr2 28370046 28370355 -224886228 + AluY SINE Alu 1 308 -3 1792 137 37 7 chr2 28370391 28370691 -224885892 + L1MA9 LINE L1 5994 6302 -10 21 71 0 0 chr2 28370722 28370764 -224885819 + AT_rich Low_complexity Low_complexity 1 42 0 1699 126 4 0 chr2 28370902 28371156 -224885427 - AluY SINE Alu -16 295 41 374 213 197 27 chr2 28372397 28372580 -224884003 - HAL1b LINE L1 0 1348 1135 1043 148 6 0 chr2 28372592 28372754 -224883829 - AluJb SINE Alu -16 296 134 2072 139 3 3 chr2 28372754 28373057 -224883526 - AluSx SINE Alu -9 303 1 933 235 68 9 chr2 28373071 28373292 -224883291 - L1MB7 LINE L1 0 6184 5951 * 1141 198 8 32 chr2 28373265 28373518 -224883065 - L1MB7 LINE L1 -611 5567 5321 1049 153 11 11 chr2 28373586 28373763 -224882820 - L1MB8 LINE L1 -6 6172 5996 212 194 0 0 chr2 28374561 28374597 -224881986 + T-rich Low_complexity Low_complexity 1 36 0 1434 159 8 16 chr2 28374835 28375086 -224881497 + AluJo SINE Alu 21 269 -43 1836 154 7 3 chr2 28375213 28375506 -224881077 + AluJb SINE Alu 1 294 -18 1838 123 74 0 chr2 28375753 28376051 -224880532 - AluSx SINE Alu 0 318 1 754 177 8 0 chr2 28376133 28376257 -224880326 - FLAM_C SINE Alu -7 126 2 578 93 10 31 chr2 28376257 28376283 -224880300 + L1MA9 LINE L1 6209 6234 -78 2009 144 84 72 chr2 28376283 28376712 -224879871 - Tigger2a DNA MER2_type 0 434 1 578 93 10 31 chr2 28376712 28376782 -224879801 + L1MA9 LINE L1 6234 6303 -9 421 39 0 0 chr2 28376841 28376893 -224879690 - L1MA9 LINE L1 0 6312 6261 252 225 0 79 chr2 28376901 28376963 -224879620 + MIR SINE MIR 175 230 -32 1274 170 83 0 chr2 28376963 28377181 -224879402 + MER46A DNA MER2_type 1 236 0 252 225 0 79 chr2 28377181 28377207 -224879376 + MIR SINE MIR 230 256 -6 1530 189 6 26 chr2 28378788 28379100 -224877483 - AluJo SINE Alu -6 306 1 992 211 21 5 chr2 28379624 28379818 -224876765 - MER58A DNA MER1_type 0 224 28 285 188 71 59 chr2 28379820 28379905 -224876678 + MIR SINE MIR 167 252 -10 1598 183 3 20 chr2 28380874 28381174 -224875409 - AluJb SINE Alu -17 295 1 2146 97 47 7 chr2 28381840 28382140 -224874443 - AluSp SINE Alu -1 312 1 26 0 0 27 chr2 28382216 28382234 -224874349 + AT_rich Low_complexity Low_complexity 1 18 -18 354 98 0 0 chr2 28382234 28382285 -224874298 + (CA)n Simple_repeat Simple_repeat 2 52 0 26 0 0 27 chr2 28382285 28382303 -224874280 + AT_rich Low_complexity Low_complexity 18 36 0 38 0 0 0 chr2 28382449 28382487 -224874096 + AT_rich Low_complexity Low_complexity 1 38 0 2722 179 88 64 chr2 28382498 28383172 -224873411 - L1MC4 LINE L1 -14 8028 7331 2172 96 17 17 chr2 28383172 28383474 -224873109 + AluSx SINE Alu 1 302 -10 2722 179 88 64 chr2 28383474 28383596 -224872987 - L1MC4 LINE L1 -711 7331 7213 444 279 61 47 chr2 28383625 28383984 -224872599 - L1M4 LINE L1 -905 5241 4878 486 165 124 0 chr2 28383999 28384096 -224872487 - FLAM_A SINE Alu -6 136 28 2228 110 0 0 chr2 28384742 28385033 -224871550 - AluSx SINE Alu -21 291 1 380 217 30 74 chr2 28385041 28385244 -224871339 - L1M4 LINE L1 -1719 4427 4234 1472 204 14 0 chr2 28386928 28387217 -224869366 + AluJo SINE Alu 2 294 -18 1842 114 8 8 chr2 28387335 28387599 -224868984 - AluSq SINE Alu -23 290 27 1729 132 45 0 chr2 28387699 28387964 -224868619 - AluSx SINE Alu -18 294 18 266 246 127 17 chr2 28388113 28388231 -224868352 - L1MC4a LINE L1 -1737 6071 5941 * 470 128 216 0 chr2 28388225 28388327 -224868256 - L1MD3 LINE L1 0 7995 7872 6450 187 70 73 chr2 28388333 28388806 -224867777 - L1MC4a LINE L1 -220 7588 7115 2047 105 42 0 chr2 28388806 28389092 -224867491 - AluSg SINE Alu -12 298 1 6450 187 70 73 chr2 28389092 28390322 -224866261 - L1MC4a LINE L1 -693 7115 5883 2192 98 3 3 chr2 28390322 28390607 -224865976 + AluSc SINE Alu 1 285 -24 6450 187 70 73 chr2 28390607 28390630 -224865953 - L1MC4a LINE L1 -1925 5883 5861 1376 208 13 0 chr2 28390630 28390866 -224865717 + MER8 DNA MER2_type 1 239 0 6450 187 70 73 chr2 28390866 28390963 -224865620 - L1MC4a LINE L1 -1947 5861 5768 23 0 0 0 chr2 28391030 28391053 -224865530 + AT_rich Low_complexity Low_complexity 1 23 0 1264 35 0 0 chr2 28391658 28391800 -224864783 + AluY SINE Alu 158 299 -12 24 0 0 0 chr2 28391911 28391935 -224864648 + AT_rich Low_complexity Low_complexity 1 24 0 184 243 0 0 chr2 28392387 28392424 -224864159 - L2 LINE L2 0 3313 3277 1169 272 142 36 chr2 28392426 28392919 -224863664 - MLT1H1 LTR MaLR 0 555 11 940 150 39 0 chr2 28394873 28395026 -224861557 + FRAM SINE Alu 4 162 -14 1864 112 108 0 chr2 28395055 28395324 -224861259 - AluSx SINE Alu -14 298 1 901 240 115 6 chr2 28395489 28395812 -224860771 + L1MC4 LINE L1 7693 8041 -1 2250 74 32 0 chr2 28396232 28396515 -224860068 + AluSx SINE Alu 1 292 -20 1322 230 80 40 chr2 28396738 28397145 -224859438 - L1MC5 LINE L1 -30 7931 7497 1192 165 104 17 chr2 28397145 28397442 -224859141 - MER33 DNA MER1_type 0 324 2 1322 230 80 40 chr2 28397442 28397561 -224859022 - L1MC5 LINE L1 -464 7497 7384 368 86 35 0 chr2 28397614 28397672 -224858911 - MER31A LTR ERV1 -73 412 353 233 165 77 132 chr2 28397683 28397774 -224858809 - L1MC5 LINE L1 -602 7359 7274 508 262 44 1 chr2 28397785 28397917 -224858666 - MIR SINE MIR -55 153 9 1188 142 5 87 chr2 28400643 28400862 -224855721 + AluSg/x SINE Alu 89 289 -21 270 204 0 0 chr2 28400863 28400912 -224855671 + MER5B DNA MER1_type 126 174 -4 1516 149 29 18 chr2 28402780 28402926 -224853657 - AluSx SINE Alu -28 284 132 2039 86 13 57 chr2 28402926 28403240 -224853343 - AluY SINE Alu -11 300 1 1516 149 29 18 chr2 28403240 28403374 -224853209 - AluSx SINE Alu -180 132 1 364 271 51 132 chr2 28403499 28403589 -224852994 - L2 LINE L2 0 3313 3217 25 0 0 0 chr2 28403589 28403614 -224852969 + AT_rich Low_complexity Low_complexity 1 25 0 364 271 51 132 chr2 28403614 28403772 -224852811 - L2 LINE L2 -96 3217 3063 239 286 0 18 chr2 28403811 28403867 -224852716 - MIR SINE MIR -133 75 21 875 55 0 0 chr2 28404159 28404268 -224852315 - AluSx SINE Alu -1 311 203 940 117 0 0 chr2 28404268 28404396 -224852187 - AluSx SINE Alu -173 140 13 281 309 0 36 chr2 28404596 28404680 -224851903 + MIR SINE MIR 20 100 -162 217 263 79 0 chr2 28404709 28404785 -224851798 - L2 LINE L2 -32 3281 3200 310 257 0 66 chr2 28405445 28405628 -224850955 + A-rich Low_complexity Low_complexity 2 172 0 372 307 24 18 chr2 28406609 28406775 -224849808 + L3b LINE CR1 1223 1389 -194 27 0 0 0 chr2 28407043 28407070 -224849513 + AT_rich Low_complexity Low_complexity 1 27 0 818 188 43 81 chr2 28407093 28407327 -224849256 - AluJo SINE Alu -86 226 2 189 0 0 0 chr2 28407373 28407394 -224849189 + (T)n Simple_repeat Simple_repeat 1 21 0 223 330 124 0 chr2 28408105 28408202 -224848381 + MER5B DNA MER1_type 2 110 -68 249 57 0 0 chr2 28408440 28408475 -224848108 + (TG)n Simple_repeat Simple_repeat 1 35 0 2236 104 7 0 chr2 28408555 28408854 -224847729 - AluSp SINE Alu -12 301 1 21 0 0 0 chr2 28409713 28409734 -224846849 + AT_rich Low_complexity Low_complexity 1 21 0 930 176 43 16 chr2 28410333 28410521 -224846062 - L1ME LINE L1 -347 5819 5627 587 155 176 7 chr2 28411848 28411990 -224844593 + MER5A DNA MER1_type 2 167 -22 310 287 157 0 chr2 28412287 28412402 -224844181 + L2 LINE L2 3139 3271 -1 2166 96 10 14 chr2 28412494 28412810 -224843773 + AluSx SINE Alu 1 312 0 2299 78 7 7 chr2 28415200 28415494 -224841089 - AluY SINE Alu -17 294 1 354 237 0 26 chr2 28415668 28415744 -224840839 - 7SK RNA RNA -94 99 26 1353 186 119 7 chr2 28416531 28416800 -224839783 + AluJb SINE Alu 1 299 -13 680 164 0 0 chr2 28417069 28417173 -224839410 - FLAM_A SINE Alu -7 135 32 1806 167 3 23 chr2 28417261 28417567 -224839016 - AluJo SINE Alu -12 300 1 288 223 248 16 chr2 28417586 28417707 -224838876 + L2 LINE L2 3160 3308 -5 309 258 202 48 chr2 28418897 28419021 -224837562 - MIR SINE MIR -99 163 21 1006 183 163 133 chr2 28419980 28420580 -224836003 + L1MC4 LINE L1 7425 8042 0 624 218 160 0 chr2 28420671 28420827 -224835756 - MER5A DNA MER1_type 0 189 9 1863 154 31 7 chr2 28420859 28421152 -224835431 - AluSx SINE Alu -12 300 1 23 0 0 0 chr2 28421285 28421308 -224835275 + AT_rich Low_complexity Low_complexity 1 23 0 353 250 60 10 chr2 28421313 28421413 -224835170 + L2 LINE L2 3190 3294 -19 391 265 78 36 chr2 28421415 28421581 -224835002 + MIR SINE MIR 20 192 -70 297 215 56 47 chr2 28422620 28422727 -224833856 + L2 LINE L2 2610 2717 -597 184 381 58 7 chr2 28423036 28423175 -224833408 + L2 LINE L2 2866 3011 -261 598 219 214 14 chr2 28423360 28423405 -224833178 - MIR SINE MIR -3 259 224 1797 146 7 23 chr2 28423405 28423713 -224832870 - AluJo SINE Alu -9 303 1 598 219 214 14 chr2 28423713 28423882 -224832701 - MIR SINE MIR -38 224 2 327 242 16 65 chr2 28423957 28424143 -224832440 + C-rich Low_complexity Low_complexity 2 178 0 1653 125 49 28 chr2 28425739 28426027 -224830556 + AluJo SINE Alu 1 294 -18 189 261 0 0 chr2 28426400 28426446 -224830137 - MIR SINE MIR -65 143 98 24 0 0 0 chr2 28426482 28426506 -224830077 + AT_rich Low_complexity Low_complexity 1 24 0 30 45 0 0 chr2 28426536 28426580 -224830003 + AT_rich Low_complexity Low_complexity 1 44 0 1571 145 152 7 chr2 28426957 28427240 -224829343 + MER33 DNA MER1_type 1 324 0 1062 97 0 0 chr2 28427260 28427394 -224829189 - AluSg SINE Alu -176 134 1 24 32 0 0 chr2 28427991 28428022 -224828561 + AT_rich Low_complexity Low_complexity 1 31 0 223 150 33 0 chr2 28428059 28428119 -224828464 + (TA)n Simple_repeat Simple_repeat 2 63 0 2372 54 10 7 chr2 28428376 28428672 -224827911 - AluY SINE Alu -14 297 1 1774 169 0 0 chr2 28428680 28428964 -224827619 - AluJb SINE Alu -20 292 9 1956 122 7 14 chr2 28429926 28430079 -224826504 - AluSx SINE Alu -25 287 135 2417 88 3 0 chr2 28430079 28430385 -224826198 - AluSp SINE Alu -6 307 1 1956 122 7 14 chr2 28430385 28430519 -224826064 - AluSx SINE Alu -177 135 2 1030 157 6 34 chr2 28430883 28431061 -224825522 - AluJo SINE Alu -52 260 88 384 40 0 0 chr2 28431369 28431419 -224825164 + (TG)n Simple_repeat Simple_repeat 1 50 0 338 379 17 17 chr2 28431451 28431625 -224824958 - MLT1K LTR MaLR -210 378 205 512 225 99 0 chr2 28431779 28431890 -224824693 - L1MC/D LINE L1 -2151 5657 5536 31 76 0 0 chr2 28431937 28432003 -224824580 + AT_rich Low_complexity Low_complexity 1 66 0 1984 97 30 4 chr2 28432092 28432359 -224824224 - AluSq SINE Alu -15 298 25 1737 165 47 6 chr2 28432448 28432770 -224823813 - L1MB3 LINE L1 -7 6176 5842 31 76 0 0 chr2 28433100 28433166 -224823417 + AT_rich Low_complexity Low_complexity 1 66 0 232 313 47 0 chr2 28433263 28433327 -224823256 - L3 LINE CR1 -964 613 547 406 299 125 0 chr2 28433543 28433727 -224822856 + L1MC/D LINE L1 5451 5657 -2151 2139 120 0 26 chr2 28433918 28434226 -224822357 + AluSx SINE Alu 1 300 -12 2223 116 0 0 chr2 28434237 28434531 -224822052 + AluSc SINE Alu 1 294 -15 243 301 41 0 chr2 28434751 28434824 -224821759 - L2 LINE L2 -9 3304 3229 406 315 9 0 chr2 28434870 28434978 -224821605 - MIR3 SINE MIR -21 187 79 2322 97 3 0 chr2 28436484 28436784 -224819799 - AluSc SINE Alu -8 301 1 368 239 138 16 chr2 28437028 28437189 -224819394 - MIR SINE MIR -67 141 16 1464 167 158 40 chr2 28437293 28437641 -224818942 - MLT1B LTR MaLR -1 389 1 1658 108 19 19 chr2 28437698 28437956 -224818627 - AluSg SINE Alu -10 300 43 2141 111 3 7 chr2 28438588 28438886 -224817697 + AluSx SINE Alu 3 299 -13 243 188 0 0 chr2 28439544 28439592 -224816991 + GA-rich Low_complexity Low_complexity 2 49 0 267 319 86 17 chr2 28440135 28440251 -224816332 + L2 LINE L2 3146 3269 -3 342 227 76 15 chr2 28440322 28440454 -224816129 - L1ME4a LINE L1 -6 6115 5976 1958 124 13 29 chr2 28440924 28441231 -224815352 + AluSx SINE Alu 1 302 -10 500 220 0 25 chr2 28441293 28441411 -224815172 - AluJ SINE Alu 0 312 198 809 136 0 17 chr2 28441423 28441541 -224815042 - AluJ SINE Alu -194 118 3 660 264 50 50 chr2 28441574 28441740 -224814843 - L1ME4a LINE L1 -266 5855 5687 1753 166 0 27 chr2 28441740 28442035 -224814548 + AluJo SINE Alu 1 287 -25 660 264 50 50 chr2 28442035 28442148 -224814435 - L1ME4a LINE L1 -433 5688 5576 344 260 72 28 chr2 28443413 28443549 -224813034 - L1MC4a LINE L1 -1795 6013 5866 216 0 0 0 chr2 28443549 28443573 -224813010 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 344 260 72 28 chr2 28443573 28443617 -224812966 - L1MC4a LINE L1 -1942 5866 5825 357 207 47 38 chr2 28443634 28443740 -224812843 - L1MC4a LINE L1 -409 5753 5668 3161 175 22 2 chr2 28443763 28444307 -224812276 - MER68 LTR ERV1 0 562 8 293 246 14 0 chr2 28444328 28444397 -224812186 - L1MC4a LINE L1 -2226 5582 5513 2243 118 16 3 chr2 28444603 28444909 -224811674 - L1PB3 LINE L1 -12 6142 5833 1473 167 4 16 chr2 28444910 28445168 -224811415 - AluJo SINE Alu -1 311 57 6460 176 21 150 chr2 28445168 28446025 -224810558 - L1 LINE L1 -2204 3942 2976 2021 143 10 3 chr2 28446025 28446325 -224810258 - AluSx SINE Alu -10 302 1 6460 176 21 150 chr2 28446325 28446401 -224810182 - L1 LINE L1 -3170 2976 2892 189 0 0 0 chr2 28446401 28446422 -224810161 + (TC)n Simple_repeat Simple_repeat 2 22 0 850 153 0 0 chr2 28446430 28446548 -224810035 - FLAM_C SINE Alu -25 118 1 6460 176 21 150 chr2 28446548 28447507 -224809076 - L1 LINE L1 -3261 2885 2254 2098 112 18 0 chr2 28447507 28447811 -224808772 - AluSx SINE Alu 0 309 1 6460 176 21 150 chr2 28447811 28448229 -224808354 - L1 LINE L1 -3892 2254 1784 629 202 71 60 chr2 28448416 28448683 -224807900 + L1MC5 LINE L1 7509 7778 -183 383 217 94 83 chr2 28448796 28448957 -224807626 - L1MC/D LINE L1 -478 5643 5497 1648 144 0 34 chr2 28449558 28449848 -224806735 - AluJo SINE Alu 0 309 29 1717 134 29 76 chr2 28449853 28450167 -224806416 - AluJb SINE Alu -11 301 3 328 303 23 68 chr2 28451303 28451435 -224805148 + MIR SINE MIR 81 206 -56 248 170 21 0 chr2 28451493 28451540 -224805043 + MIR3 SINE MIR 113 160 -48 427 190 25 165 chr2 28451540 28451680 -224804903 - MER5B DNA MER1_type 0 178 73 1696 188 7 3 chr2 28451680 28451972 -224804611 - AluJb SINE Alu -17 295 3 427 190 25 165 chr2 28451972 28452031 -224804552 - MER5B DNA MER1_type -105 73 7 876 210 97 0 chr2 28452056 28452251 -224804332 - MER58A DNA MER1_type -10 214 1 688 277 167 53 chr2 28452562 28452623 -224803960 - L2 LINE L2 -543 2771 2718 2402 72 7 0 chr2 28452623 28452915 -224803668 - AluSg SINE Alu -16 294 1 688 277 167 53 chr2 28452915 28453326 -224803257 - L2 LINE L2 -596 2718 2245 23 0 0 0 chr2 28654109 28654132 -224602451 + AT_rich Low_complexity Low_complexity 1 23 0 4921 125 11 28 chr2 28654988 28656123 -224600460 - L1P4 LINE L1 -392 5776 4623 2159 129 0 0 chr2 28656123 28656441 -224600142 - AluSx SINE Alu 0 318 1 1484 204 39 0 chr2 28656444 28656604 -224599979 - AluJb SINE Alu -22 290 113 282 87 0 0 chr2 28656604 28656650 -224599933 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 1484 204 39 0 chr2 28656650 28656768 -224599815 - AluJb SINE Alu -199 113 1 4921 125 11 28 chr2 28656768 28657023 -224599560 - L1P4 LINE L1 -1547 4621 4402 1231 212 0 4 chr2 28657413 28657668 -224598915 - AluJb SINE Alu -54 258 5 1707 140 22 14 chr2 28657734 28658012 -224598571 - AluJo SINE Alu -21 291 12 396 165 10 41 chr2 28658228 28658325 -224598258 - MLT1F LTR MaLR -61 481 388 37 0 0 0 chr2 28658517 28658554 -224598029 + AT_rich Low_complexity Low_complexity 1 37 0 252 237 92 13 chr2 28658587 28658663 -224597920 - L2 LINE L2 -10 3303 3222 1019 238 70 8 chr2 28659616 28659860 -224596723 - MIR SINE MIR 0 262 4 365 273 30 0 chr2 28660807 28660906 -224595677 - L2 LINE L2 -2 3270 3169 202 308 112 37 chr2 28661828 28661935 -224594648 - L2 LINE L2 0 3313 3199 2173 116 0 0 chr2 28662017 28662311 -224594272 + AluSc SINE Alu 1 294 -15 2398 86 0 0 chr2 28662578 28662870 -224593713 + AluSg SINE Alu 1 292 -18 2164 170 14 2 chr2 28663121 28663544 -224593039 + L1 LINE L1 4812 5239 -907 2013 123 3 7 chr2 28664063 28664356 -224592227 - AluSx SINE Alu -20 292 1 222 241 19 0 chr2 28665042 28665096 -224591487 + L2 LINE L2 2550 2604 -710 955 268 69 119 chr2 28665695 28666406 -224590177 + L2 LINE L2 2591 3276 -37 1730 104 25 0 chr2 28666479 28666758 -224589825 - L1MA5A LINE L1 -4 6293 6008 2225 127 0 10 chr2 28667504 28667681 -224588902 - AluSx SINE Alu -1 311 137 2226 95 0 13 chr2 28667681 28667985 -224588598 - AluSc SINE Alu -9 300 1 2225 127 0 10 chr2 28667985 28668121 -224588462 - AluSx SINE Alu -175 137 1 793 120 33 13 chr2 28668257 28668407 -224588176 + L1M2 LINE L1 5318 5470 -830 340 194 28 14 chr2 28668407 28668479 -224588104 - MER2 DNA MER2_type 0 345 273 990 86 39 0 chr2 28668481 28668609 -224587974 + AluSg SINE Alu 1 133 -177 728 113 48 0 chr2 28668621 28668745 -224587838 - MER2 DNA MER2_type -86 259 130 3846 130 4 83 chr2 28668745 28668946 -224587637 - Tigger1 DNA MER2_type 0 2418 2203 6031 32 0 0 chr2 28668946 28669656 -224586927 - L1PA3 LINE L1 -1 6154 5445 3846 130 4 83 chr2 28669656 28669687 -224586896 - Tigger1 DNA MER2_type -215 2203 2171 2194 136 0 3 chr2 28669687 28669996 -224586587 + AluSx SINE Alu 1 308 -4 3846 130 4 83 chr2 28669996 28670549 -224586034 - Tigger1 DNA MER2_type -247 2171 1694 * 6577 132 64 55 chr2 28670526 28671879 -224584704 - Tigger1 DNA MER2_type -1053 1365 1 532 191 200 0 chr2 28671879 28671988 -224584595 - MER2 DNA MER2_type -214 131 1 798 142 39 0 chr2 28672010 28672137 -224584446 + FLAM_A SINE Alu 2 133 0 1792 99 17 0 chr2 28672144 28672377 -224584206 + AluSc SINE Alu 1 237 -72 281 169 17 0 chr2 28672377 28672436 -224584147 + (TA)n Simple_repeat Simple_repeat 2 61 0 348 304 51 88 chr2 28673738 28673955 -224582628 + HAL1 LINE L1 1684 1892 -615 253 286 94 21 chr2 28674331 28674523 -224582060 + HAL1 LINE L1 2165 2370 -137 21 57 0 0 chr2 28674657 28674692 -224581891 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr2 28674724 28674746 -224581837 + AT_rich Low_complexity Low_complexity 1 22 0 2394 103 5 46 chr2 28675157 28675574 -224581009 + L1PA13 LINE L1 5759 6158 -5 388 91 0 0 chr2 28675575 28675630 -224580953 + MSTB2 LTR MaLR 403 457 0 2535 60 0 0 chr2 28675665 28675966 -224580617 - AluY SINE Alu -10 301 1 189 220 20 40 chr2 28676067 28676117 -224580466 - MIR SINE MIR -105 157 109 898 141 0 22 chr2 28676193 28676328 -224580255 - FLAM_C SINE Alu -1 132 1 1731 152 20 10 chr2 28676718 28677015 -224579568 - AluJb SINE Alu -12 300 1 1265 259 211 15 chr2 28677398 28678340 -224578243 + L2 LINE L2 2176 3311 -2 879 123 8 0 chr2 28679060 28679190 -224577393 + FLAM_C SINE Alu 1 131 -2 27 0 0 0 chr2 28679193 28679220 -224577363 + AT_rich Low_complexity Low_complexity 1 27 0 353 242 109 32 chr2 28679285 28679416 -224577167 + MIR SINE MIR 70 208 0 2028 183 57 28 chr2 28679463 28679933 -224576650 + MLT1D LTR MaLR 22 505 0 305 279 38 0 chr2 28680317 28680396 -224576187 + MIR3 SINE MIR 109 190 -18 2141 113 3 0 chr2 28680586 28680894 -224575689 - AluSq SINE Alu 0 309 1 672 196 243 0 chr2 28681173 28681346 -224575237 + MER58C DNA MER1_type 1 215 0 229 132 0 0 chr2 28681948 28681986 -224574597 + L1ME4a LINE L1 6080 6117 -4 285 119 0 0 chr2 28682312 28682354 -224574229 - MIR SINE MIR -66 196 155 1555 261 76 9 chr2 28684940 28685587 -224570996 + L1M4 LINE L1 3851 4540 -1606 1742 161 4 7 chr2 28685593 28685867 -224570716 + AluJb SINE Alu 1 273 -39 2243 124 54 94 chr2 28686002 28686500 -224570083 + L1MB3 LINE L1 5706 6183 0 410 250 49 24 chr2 28686492 28686656 -224569927 + L1M4 LINE L1 4699 4866 -1280 * 248 175 18 0 chr2 28686657 28686714 -224569869 + Charlie7 DNA MER1_type 2165 2222 -390 25 75 0 0 chr2 28686789 28686842 -224569741 + AT_rich Low_complexity Low_complexity 1 53 0 2014 153 33 19 chr2 28686880 28687240 -224569343 + MLT1A1 LTR MaLR 1 365 0 2225 97 10 3 chr2 28687267 28687566 -224569017 + AluSc SINE Alu 1 301 -8 203 361 135 0 chr2 28687757 28687890 -224568693 - L2 LINE L2 -167 3105 2955 207 282 11 55 chr2 28688639 28688820 -224567763 + GA-rich Low_complexity Low_complexity 4 176 0 598 229 33 33 chr2 28689098 28689251 -224567332 + MIR SINE MIR 89 241 -21 284 262 114 13 chr2 28689800 28689949 -224566634 + MER112 DNA MER1_type 78 241 -19 873 319 150 12 chr2 28689984 28690492 -224566091 + L3 LINE CR1 997 1574 -3 970 158 124 13 chr2 28691241 28691475 -224565108 + MER5C DNA MER1_type 3 262 -62 1157 168 92 27 chr2 28692455 28692717 -224563866 - LTR35 LTR ERV1 -339 279 1 241 273 7 58 chr2 28693044 28693183 -224563400 + CT-rich Low_complexity Low_complexity 4 135 0 1468 214 36 78 chr2 28693267 28693354 -224563229 + L1ME3A LINE L1 5659 5748 -422 2714 93 11 11 chr2 28693354 28693729 -224562854 - THE1C LTR MaLR 0 375 1 1468 214 36 78 chr2 28693729 28694170 -224562413 + L1ME3A LINE L1 5748 6165 -5 288 281 141 47 chr2 28694351 28694479 -224562104 - L2 LINE L2 -38 3234 3095 256 310 0 0 chr2 28694530 28694588 -224561995 + MIR SINE MIR 79 136 -72 1360 155 32 79 chr2 28695023 28695250 -224561333 + L1MB3 LINE L1 5160 5353 -827 1927 157 0 7 chr2 28695250 28695550 -224561033 + AluJo SINE Alu 15 312 0 1360 155 32 79 chr2 28695550 28695767 -224560816 + L1MB3 LINE L1 5353 5579 -601 2144 111 0 88 chr2 28695772 28696009 -224560574 + L1PA16 LINE L1 5804 5995 -171 1509 164 20 37 chr2 28696009 28696307 -224560276 + AluJb SINE Alu 1 293 -19 2144 111 0 88 chr2 28696307 28696457 -224560126 + L1PA16 LINE L1 5995 6157 -9 2994 135 49 14 chr2 28696476 28697067 -224559516 + L1MB3 LINE L1 5571 6182 -1 22 56 0 0 chr2 28697117 28697153 -224559430 + AT_rich Low_complexity Low_complexity 1 36 0 245 250 32 16 chr2 28697639 28697763 -224558820 + (CGCGG)n Simple_repeat Simple_repeat 2 127 0 184 278 206 41 chr2 28699119 28699216 -224557367 + MIR SINE MIR 30 142 -66 194 308 64 0 chr2 28699629 28699707 -224556876 + MIR SINE MIR 129 211 -51 285 250 14 14 chr2 28700543 28700615 -224555968 - L2 LINE L2 0 3313 3242 2462 82 0 0 chr2 28700706 28701009 -224555574 + AluSc SINE Alu 1 303 -6 3006 202 61 18 chr2 28702201 28703034 -224553549 - L1MC4a LINE L1 -126 7682 6814 232 258 15 30 chr2 28704389 28704455 -224552128 - L2 LINE L2 -1 3312 3248 256 330 62 0 chr2 28705414 28705511 -224551072 + MIR3 SINE MIR 82 184 -24 2211 165 46 0 chr2 28705524 28705955 -224550628 + L1MB7 LINE L1 5734 6184 0 891 150 0 0 chr2 28705975 28706108 -224550475 + FLAM_A SINE Alu 1 133 0 2050 97 31 3 chr2 28706469 28706759 -224549824 - AluSq SINE Alu -15 298 1 2628 52 0 0 chr2 28707754 28708060 -224548523 + AluY SINE Alu 1 306 -5 303 119 0 0 chr2 28708696 28708738 -224547845 + 5S rRNA rRNA 1 42 -79 420 284 59 35 chr2 28708877 28709131 -224547452 - L1ME2 LINE L1 -212 5952 5693 695 204 136 9 chr2 28709178 28709398 -224547185 - MER112 DNA MER1_type -10 250 3 529 289 132 5 chr2 28709404 28709601 -224546982 - L1ME2 LINE L1 -2159 5649 5428 670 297 118 38 chr2 28709607 28709878 -224546705 - L1ME2 LINE L1 -755 5391 5143 264 100 0 0 chr2 28709878 28709918 -224546665 + (TG)n Simple_repeat Simple_repeat 1 40 0 240 35 0 0 chr2 28709917 28709946 -224546637 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 670 297 118 38 chr2 28709918 28710333 -224546250 - L1ME2 LINE L1 -1003 5143 4680 225 321 83 9 chr2 28710449 28710558 -224546025 - L2 LINE L2 -198 3115 2999 3890 143 35 50 chr2 28710563 28711303 -224545280 - MER44D DNA MER2_type -3 602 2 755 271 123 22 chr2 28711405 28711722 -224544861 + HAL1 LINE L1 679 1027 -1480 610 233 48 0 chr2 28711736 28711882 -224544701 + HAL1 LINE L1 1587 1739 -768 258 292 15 0 chr2 28711900 28711965 -224544618 + HAL1 LINE L1 1814 1879 -628 647 304 64 5 chr2 28712304 28712524 -224544059 + MIR SINE MIR 2 234 -28 472 315 18 0 chr2 28712723 28712888 -224543695 + MARNA DNA Mariner 62 229 -357 1742 163 10 16 chr2 28713110 28713416 -224543167 + AluJb SINE Alu 1 304 -8 275 254 99 18 chr2 28714588 28714800 -224541783 - MER102b DNA MER1_type 0 341 46 5700 151 77 2 chr2 28715135 28716156 -224540427 - L1P LINE L1 -1752 4394 3297 1400 206 57 34 chr2 28716156 28716505 -224540078 - MSTD LTR MaLR -39 357 1 324 353 158 16 chr2 28716505 28716695 -224539888 - L2 LINE L2 -97 3175 2959 191 344 33 22 chr2 28716827 28716917 -224539666 - L2 LINE L2 -504 2810 2720 7191 29 1 1 chr2 28716922 28717773 -224538810 + L1PA3 LINE L1 5305 6155 0 274 360 17 67 chr2 28718584 28718762 -224537821 - MIR3 SINE MIR -6 202 34 1643 151 33 3 chr2 28718972 28719271 -224537312 - L1MB3 LINE L1 -19 6164 5857 342 212 257 0 chr2 28719279 28719392 -224537191 + L1MEc LINE L1 1116 1257 -5139 * 2146 127 65 3 chr2 28719387 28719742 -224536841 - L1MB3 LINE L1 -245 5938 5562 642 263 126 52 chr2 28720023 28720217 -224536366 - L1MB3 LINE L1 -297 5824 5646 1752 185 0 16 chr2 28720217 28720530 -224536053 - AluJb SINE Alu -4 308 1 642 263 126 52 chr2 28720530 28720788 -224535795 - L1MB3 LINE L1 -475 5646 5313 311 301 18 44 chr2 28720956 28721069 -224535514 + MER5B DNA MER1_type 63 172 -6 192 290 230 0 chr2 28721419 28721519 -224535064 + L2 LINE L2 3190 3312 -1 206 291 0 0 chr2 28722396 28722451 -224534132 + L2 LINE L2 3216 3270 -2 340 358 11 16 chr2 28723001 28723188 -224533395 - L1M4 LINE L1 -3552 2594 2409 241 222 10 30 chr2 28723285 28723384 -224533199 - L1M4 LINE L1 -3794 2352 2256 25 0 0 0 chr2 28723426 28723451 -224533132 + AT_rich Low_complexity Low_complexity 1 25 0 19845 85 23 4 chr2 28723598 28724505 -224532078 + Charlie3 DNA MER1_type 1 889 -1817 219 36 0 0 chr2 28724505 28724533 -224532050 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 19845 85 23 4 chr2 28724533 28726280 -224530303 + Charlie3 DNA MER1_type 889 2706 0 23 86 0 0 chr2 28726561 28726619 -224529964 + AT_rich Low_complexity Low_complexity 1 58 0 846 288 4 13 chr2 28726664 28726897 -224529686 + MIR SINE MIR 32 262 0 276 354 18 18 chr2 28726932 28727045 -224529538 - L2 LINE L2 -226 3046 2934 241 307 80 33 chr2 28727312 28727462 -224529121 + MIR SINE MIR 7 163 -99 21 0 0 0 chr2 28727543 28727564 -224529019 + AT_rich Low_complexity Low_complexity 1 21 0 3019 237 83 31 chr2 28728552 28728677 -224527906 + L1MEc LINE L1 800 917 -5479 2077 149 0 0 chr2 28728677 28728973 -224527610 - AluJo SINE Alu -16 296 1 3019 237 83 31 chr2 28728973 28730057 -224526526 + L1MEc LINE L1 917 2072 -4324 754 164 8 22 chr2 28730082 28730216 -224526367 + FLAM_C SINE Alu 2 133 0 2344 61 0 0 chr2 28730449 28730757 -224525826 - AluY SINE Alu 0 308 1 374 177 0 0 chr2 28731176 28731238 -224525345 - L2 LINE L2 -250 3063 3002 1875 135 15 7 chr2 28731489 28731763 -224524820 + AluJo SINE Alu 17 292 -20 222 296 62 0 chr2 28732377 28732458 -224524125 - MIR SINE MIR -108 154 69 1797 152 17 10 chr2 28733546 28733848 -224522735 + AluJb SINE Alu 1 304 -8 1725 148 30 11 chr2 28733851 28734121 -224522462 + AluSg SINE Alu 1 275 -35 211 151 19 57 chr2 28734504 28734528 -224522055 + (CAGAGA)n Simple_repeat Simple_repeat 2 25 -27 2196 120 0 0 chr2 28734528 28734828 -224521755 + AluSx SINE Alu 1 300 -12 211 151 19 57 chr2 28734828 28734856 -224521727 + (CAGAGA)n Simple_repeat Simple_repeat 25 52 0 302 292 100 46 chr2 28734867 28734997 -224521586 - L2 LINE L2 0 3272 3136 2111 91 28 3 chr2 28735506 28735792 -224520791 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr2 28736029 28736051 -224520532 + AT_rich Low_complexity Low_complexity 1 22 0 1592 171 7 31 chr2 28736573 28736891 -224519692 - AluJb SINE Alu 0 311 1 1362 158 108 23 chr2 28737015 28737314 -224519269 - AluJb SINE Alu 0 321 1 26 0 0 0 chr2 28738224 28738250 -224518333 + AT_rich Low_complexity Low_complexity 1 26 0 2520 205 46 34 chr2 28738443 28739120 -224517463 - L1ME1 LINE L1 -4 6231 5547 1748 134 0 103 chr2 28739223 28739552 -224517031 - AluJb SINE Alu -17 295 1 3684 230 67 82 chr2 28739579 28741330 -224515253 - L1ME1 LINE L1 -1291 4924 3199 788 210 64 72 chr2 28741341 28741731 -224514852 - L1ME1 LINE L1 -3961 2254 1900 1636 217 59 33 chr2 28741734 28742712 -224513871 - L1M4 LINE L1 -789 5357 4106 2319 107 0 0 chr2 28742712 28743011 -224513572 + AluSx SINE Alu 1 299 -13 1636 217 59 33 chr2 28743011 28743172 -224513411 - L1M4 LINE L1 -2040 4106 3951 2286 84 10 3 chr2 28743474 28743773 -224512810 + AluSx SINE Alu 1 301 -11 4497 211 86 80 chr2 28744575 28745927 -224510656 - L1M4 LINE L1 -2196 3950 2583 935 103 0 14 chr2 28745927 28746073 -224510510 - L1PB1 LINE L1 -1 6150 6007 4497 211 86 80 chr2 28746073 28746547 -224510036 - L1M4 LINE L1 -3563 2583 2113 1526 168 103 0 chr2 28747253 28747396 -224509187 - AluJo SINE Alu -23 289 162 1688 164 0 13 chr2 28747396 28747694 -224508889 - AluJo SINE Alu -9 303 10 1526 168 103 0 chr2 28747694 28747812 -224508771 - AluJo SINE Alu -150 162 1 22 56 0 0 chr2 28748956 28748992 -224507591 + AT_rich Low_complexity Low_complexity 1 36 0 210 225 0 0 chr2 28750746 28750786 -224505797 + L2 LINE L2 3231 3270 -2 254 412 91 3 chr2 28750828 28751158 -224505425 + L3 LINE CR1 96 454 -1123 1585 243 101 87 chr2 28751876 28752461 -224504122 + MLT1H1 LTR MaLR 1 553 -2 496 181 16 0 chr2 28752677 28752804 -224503779 + (TA)n Simple_repeat Simple_repeat 2 130 0 25 0 0 0 chr2 28752808 28752833 -224503750 + AT_rich Low_complexity Low_complexity 1 25 0 353 312 85 30 chr2 28754834 28755033 -224501550 - MIR SINE MIR -40 222 13 2383 114 16 19 chr2 28755473 28755840 -224500743 + MER47A DNA MER2_type 1 366 0 1995 160 0 7 chr2 28755943 28756250 -224500333 - AluJo SINE Alu -7 305 1 1436 202 30 14 chr2 28756322 28756619 -224499964 - AluJo SINE Alu -8 304 3 2298 115 0 0 chr2 28757408 28757720 -224498863 + AluSx SINE Alu 1 312 0 966 324 180 57 chr2 28757792 28758197 -224498386 + L3 LINE CR1 320 673 -904 1387 181 169 49 chr2 28758197 28758605 -224497978 + MSTB2 LTR MaLR 1 457 0 966 324 180 57 chr2 28758605 28759241 -224497342 + L3 LINE CR1 673 1490 -87 287 225 45 34 chr2 28759329 28759418 -224497165 - MER94 DNA DNA -43 91 2 1017 218 36 27 chr2 28759549 28759880 -224496703 - L1MC5 LINE L1 -34 7927 7594 222 196 43 0 chr2 28759880 28759926 -224496657 + (CATA)n Simple_repeat Simple_repeat 1 48 0 194 229 14 0 chr2 28760026 28760096 -224496487 + CT-rich Low_complexity Low_complexity 3 73 0 1592 195 67 69 chr2 28760139 28760839 -224495744 - L1MC5 LINE L1 -466 7495 6766 249 261 29 0 chr2 28761319 28761388 -224495195 - LTR16C LTR ERVL 0 491 421 1998 125 50 39 chr2 28761389 28761749 -224494834 + THE1B LTR MaLR 1 364 0 10279 84 104 1 chr2 28761749 28763181 -224493402 + THE1B-int LTR MaLR 1 1580 0 2254 112 48 28 chr2 28763181 28763538 -224493045 + THE1B LTR MaLR 1 364 0 588 338 110 0 chr2 28763538 28763846 -224492737 - LTR16C LTR ERVL -67 424 83 952 218 0 33 chr2 28763913 28764124 -224492459 + MER20 DNA MER1_type 16 219 0 1294 260 45 69 chr2 28764725 28765417 -224491166 - L1MC4 LINE L1 -148 7894 7220 660 309 92 20 chr2 28766383 28766678 -224489905 + L3 LINE CR1 1161 1476 -101 1076 161 33 5 chr2 28766739 28766950 -224489633 + MER33 DNA MER1_type 1 217 -107 27 0 0 0 chr2 28766963 28766990 -224489593 + AT_rich Low_complexity Low_complexity 1 27 0 2153 103 10 3 chr2 28766992 28767284 -224489299 - AluSx SINE Alu -16 296 3 245 202 105 81 chr2 28767845 28767969 -224488614 + L1ME1 LINE L1 316 442 -5628 5633 231 50 51 chr2 28768134 28770930 -224485653 + L1ME1 LINE L1 3293 6080 -20 437 158 33 17 chr2 28770930 28771050 -224485533 + MER33 DNA MER1_type 203 324 0 1319 314 64 37 chr2 28771510 28772215 -224484368 + L3 LINE CR1 674 1397 -180 2431 150 36 7 chr2 28772260 28772674 -224483909 + MSTB LTR MaLR 1 426 0 5071 113 7 16 chr2 28772850 28773239 -224483344 - L1PA15 LINE L1 0 6165 5785 2213 121 0 19 chr2 28773239 28773553 -224483030 - AluSx SINE Alu -4 308 1 5071 113 7 16 chr2 28773553 28773936 -224482647 - L1PA15 LINE L1 -380 5785 5400 21 36 0 0 chr2 28774953 28774981 -224481602 + AT_rich Low_complexity Low_complexity 1 28 0 1256 151 37 0 chr2 28775014 28775259 -224481324 + L1MA4 LINE L1 6038 6291 -9 4587 160 37 18 chr2 28775563 28776816 -224479767 - L1MB7 LINE L1 -10 6174 4899 429 97 28 0 chr2 28776831 28776903 -224479680 - L1MB2 LINE L1 -4 6167 6094 2236 184 45 12 chr2 28776918 28777065 -224479518 - L1MB2 LINE L1 -228 5943 5802 351 0 0 0 chr2 28777065 28777104 -224479479 + (CA)n Simple_repeat Simple_repeat 2 40 0 2236 184 45 12 chr2 28777104 28777440 -224479143 - L1MB2 LINE L1 -369 5802 5444 * 2945 239 26 11 chr2 28777436 28778249 -224478334 - L1MB7 LINE L1 -1237 4909 4085 33 25 0 0 chr2 28778845 28778885 -224477698 + AT_rich Low_complexity Low_complexity 1 40 0 5588 78 14 1 chr2 28778920 28779278 -224477305 - L1PB1 LINE L1 -1 6150 5798 369 0 0 0 chr2 28779278 28779319 -224477264 + (TG)n Simple_repeat Simple_repeat 2 42 0 5588 78 14 1 chr2 28779319 28779728 -224476855 - L1PB1 LINE L1 -353 5798 5373 581 257 67 26 chr2 28781277 28781501 -224475082 - MIR SINE MIR -16 246 20 1926 170 0 0 chr2 28781754 28782054 -224474529 + AluJb SINE Alu 1 300 -12 22 0 0 0 chr2 28783326 28783348 -224473235 + AT_rich Low_complexity Low_complexity 1 22 0 186 376 92 9 chr2 28783549 28783658 -224472925 - L2 LINE L2 -218 3054 2937 237 288 38 12 chr2 28784088 28784168 -224472415 - MIR3 SINE MIR -14 194 113 31 26 0 0 chr2 28784926 28784964 -224471619 + AT_rich Low_complexity Low_complexity 1 38 0 25 51 0 0 chr2 28785025 28785064 -224471519 + AT_rich Low_complexity Low_complexity 1 39 0 267 324 0 14 chr2 28785323 28785394 -224471189 - MER5A DNA MER1_type 0 189 120 214 313 144 62 chr2 28785325 28785485 -224471098 + MER5A DNA MER1_type 17 189 0 * 4100 156 68 43 chr2 28785592 28786484 -224470099 - L1MB7 LINE L1 0 6184 5270 1110 283 67 59 chr2 28786937 28787308 -224469275 + L2 LINE L2 2816 3193 -120 500 236 18 0 chr2 28787308 28787418 -224469165 + MER81 DNA DNA 2 113 -1 1110 283 67 59 chr2 28787418 28787540 -224469043 + L2 LINE L2 3193 3313 0 1910 218 65 17 chr2 28788543 28789067 -224467516 - L1ME3A LINE L1 -11 6159 5611 539 248 242 28 chr2 28789107 28789731 -224466852 - LTR41 LTR ERVL -2 793 1 407 333 69 43 chr2 28789749 28789794 -224466789 - L1ME LINE L1 -5110 960 918 2363 85 0 3 chr2 28789794 28790101 -224466482 - AluY SINE Alu -5 306 1 407 333 69 43 chr2 28790101 28790446 -224466137 - L1ME LINE L1 -5152 918 560 21 0 0 0 chr2 28791199 28791220 -224465363 + AT_rich Low_complexity Low_complexity 1 21 0 32 81 0 0 chr2 28791299 28791373 -224465210 + AT_rich Low_complexity Low_complexity 1 74 0 2152 116 0 0 chr2 28792094 28792386 -224464197 + AluSg SINE Alu 1 292 -18 31 26 0 0 chr2 28792512 28792550 -224464033 + AT_rich Low_complexity Low_complexity 1 38 0 191 389 40 32 chr2 28793266 28793392 -224463191 + L2 LINE L2 3108 3234 -38 264 343 76 19 chr2 28793506 28793716 -224462867 - L2 LINE L2 -226 3046 2825 6284 147 50 38 chr2 28794191 28795453 -224461130 - L1MC3 LINE L1 -8 7777 6501 268 295 13 0 chr2 28795529 28795607 -224460976 - L2 LINE L2 -1 3312 3234 203 327 46 26 chr2 28795621 28795747 -224460836 - L2 LINE L2 0 3313 3093 2364 159 68 5 chr2 28795767 28796162 -224460421 - MSTB LTR MaLR -6 420 1 488 253 18 35 chr2 28796227 28796397 -224460186 - MLT1K LTR MaLR 0 588 422 661 269 81 15 chr2 28796777 28797111 -224459472 + L1MEc LINE L1 1346 1701 -4695 342 276 0 48 chr2 28797506 28797611 -224458972 - MER5B DNA MER1_type -37 141 42 1293 164 14 0 chr2 28797618 28797831 -224458752 + AluJb SINE Alu 87 302 -10 713 169 97 19 chr2 28798911 28799065 -224457518 - AluJb SINE Alu -11 301 136 21 36 0 0 chr2 28799351 28799379 -224457204 + AT_rich Low_complexity Low_complexity 1 28 0 688 221 59 37 chr2 28799981 28800252 -224456331 - L1MC5 LINE L1 -82 7879 7603 708 189 60 37 chr2 28800258 28800475 -224456108 - L1MC5 LINE L1 -407 7554 7333 24 32 0 0 chr2 28801193 28801224 -224455359 + AT_rich Low_complexity Low_complexity 1 31 0 206 333 17 0 chr2 28801460 28801577 -224455006 + (TA)n Simple_repeat Simple_repeat 1 119 0 188 398 55 16 chr2 28802226 28802354 -224454229 - L2 LINE L2 -2 3270 3138 225 183 0 141 chr2 28802595 28802666 -224453917 - Charlie8 DNA MER1_type -989 1428 1368 262 305 29 29 chr2 28803424 28803529 -224453054 + MER5A DNA MER1_type 65 169 -9 28 0 0 0 chr2 28803627 28803655 -224452928 + AT_rich Low_complexity Low_complexity 1 28 0 689 279 71 75 chr2 28804854 28805416 -224451167 - MLT1K LTR MaLR -27 561 2 207 0 0 0 chr2 28807887 28807910 -224448673 + (A)n Simple_repeat Simple_repeat 1 23 0 324 0 0 0 chr2 28807916 28807952 -224448631 + (CA)n Simple_repeat Simple_repeat 2 37 0 195 129 0 0 chr2 28808811 28808842 -224447741 + (T)n Simple_repeat Simple_repeat 1 31 0 285 281 10 10 chr2 28809998 28810094 -224446489 + CT-rich Low_complexity Low_complexity 2 97 0 281 284 0 0 chr2 28811174 28811241 -224445342 + L3 LINE CR1 1247 1313 -264 2135 169 52 12 chr2 28811726 28812206 -224444377 - L1MB8 LINE L1 -1 6177 5679 5312 134 20 38 chr2 28812219 28813068 -224443515 - L1PB1 LINE L1 0 6151 5331 3706 79 0 0 chr2 28813068 28813549 -224443034 - L1PA8 LINE L1 -13 6159 5679 5312 134 20 38 chr2 28813549 28814190 -224442393 - L1PB1 LINE L1 -820 5331 4680 366 294 99 64 chr2 28814622 28814935 -224441648 - L1ME4a LINE L1 -23 6098 5775 264 271 54 60 chr2 28814996 28815162 -224441421 - L1ME4a LINE L1 -362 5759 5595 351 0 0 0 chr2 28815175 28815214 -224441369 + (CA)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr2 28817420 28817441 -224439142 + AT_rich Low_complexity Low_complexity 1 21 0 2261 202 37 26 chr2 28818070 28818345 -224438238 + Charlie1a DNA MER1_type 5 275 -2486 2582 27 0 7 chr2 28818345 28818642 -224437941 + AluY SINE Alu 1 295 -16 2261 202 37 26 chr2 28818642 28818910 -224437673 + Charlie1a DNA MER1_type 275 554 -901 21 0 0 0 chr2 28819085 28819106 -224437477 + AT_rich Low_complexity Low_complexity 1 21 0 347 301 82 7 chr2 28819829 28819975 -224436608 - MER5A DNA MER1_type -31 158 2 21 57 0 0 chr2 28820986 28821021 -224435562 + AT_rich Low_complexity Low_complexity 1 35 0 358 255 121 13 chr2 28821122 28821271 -224435312 + MIR SINE MIR 77 241 -21 1689 183 26 10 chr2 28821762 28822068 -224434515 + AluJb SINE Alu 1 311 -1 207 193 23 45 chr2 28822899 28822987 -224433596 + (TTATA)n Simple_repeat Simple_repeat 2 87 0 22 35 0 0 chr2 28823177 28823206 -224433377 + AT_rich Low_complexity Low_complexity 1 29 0 2151 51 0 0 chr2 28823404 28823658 -224432925 - AluY SINE Alu -14 297 44 2490 226 149 12 chr2 28823674 28824414 -224432169 + L2 LINE L2 1706 2546 -768 496 153 0 0 chr2 28825023 28825095 -224431488 - FLAM_A SINE Alu -54 88 17 2119 86 0 7 chr2 28825234 28825503 -224431080 - AluY SINE Alu -44 267 1 21 36 0 0 chr2 28825605 28825633 -224430950 + AT_rich Low_complexity Low_complexity 1 28 0 196 252 130 16 chr2 28825700 28825823 -224430760 - L2 LINE L2 -144 3169 3033 2198 102 0 3 chr2 28826499 28826794 -224429789 - AluSq SINE Alu -17 296 3 337 301 7 98 chr2 28827170 28827323 -224429260 + MIR3 SINE MIR 2 140 -68 2518 76 0 0 chr2 28827537 28827840 -224428743 - AluY SINE Alu -8 303 1 205 260 60 0 chr2 28827899 28827949 -224428634 + MIR3 SINE MIR 149 201 -7 666 144 30 66 chr2 28828209 28828376 -224428207 - L1MB3 LINE L1 0 6183 6023 222 274 83 12 chr2 28829010 28829094 -224427489 + MIR SINE MIR 60 149 -113 313 348 22 38 chr2 28829575 28829759 -224426824 + L2 LINE L2 2217 2397 -917 1604 164 7 41 chr2 28829910 28830227 -224426356 - AluJb SINE Alu 0 307 1 22 106 0 0 chr2 28830243 28830328 -224426255 + AT_rich Low_complexity Low_complexity 1 85 0 279 79 0 0 chr2 28830618 28830656 -224425927 + (CA)n Simple_repeat Simple_repeat 1 38 0 204 40 0 0 chr2 28830655 28830680 -224425903 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 1213 184 5 22 chr2 28831756 28831979 -224424604 + MER20 DNA MER1_type 1 219 0 420 208 0 0 chr2 28832150 28832251 -224424332 + (TA)n Simple_repeat Simple_repeat 2 102 0 1018 92 10 146 chr2 28832821 28833027 -224423556 + AluSp SINE Alu 136 313 0 1702 116 0 21 chr2 28833034 28833275 -224423308 + AluSc SINE Alu 71 306 -3 270 261 14 0 chr2 28833275 28833344 -224423239 - L1MEd LINE L1 -6037 82 13 469 288 96 0 chr2 28833517 28833663 -224422920 + L2 LINE L2 2580 2739 -575 453 247 43 19 chr2 28834055 28834215 -224422368 + L1MC3 LINE L1 5983 6146 -20 987 206 70 58 chr2 28834394 28834738 -224421845 - L1MC5 LINE L1 -865 7096 6749 881 204 0 0 chr2 28834755 28834902 -224421681 - FRAM SINE Alu -17 159 13 1616 103 0 0 chr2 28834906 28835110 -224421473 - AluSc SINE Alu -15 294 91 2551 54 0 0 chr2 28835118 28835414 -224421169 - AluY SINE Alu -15 296 1 330 280 34 17 chr2 28835416 28835534 -224421049 - L1MC4a LINE L1 -1075 6733 6614 367 233 93 13 chr2 28835552 28835702 -224420881 - L1MC5 LINE L1 -46 7915 7754 1770 181 0 10 chr2 28835943 28836231 -224420352 + AluJo SINE Alu 2 286 -26 547 198 0 9 chr2 28836658 28836774 -224419809 + L1M4 LINE L1 4834 4948 -1198 2550 77 0 0 chr2 28836784 28837095 -224419488 + AluY SINE Alu 1 311 0 201 167 0 0 chr2 28837122 28837158 -224419425 + (TA)n Simple_repeat Simple_repeat 2 37 0 422 177 21 0 chr2 28837162 28837258 -224419325 + L1M4 LINE L1 4976 5073 -1073 327 248 120 0 chr2 28837262 28837387 -224419196 + Charlie1 DNA MER1_type 2622 2761 0 2247 115 3 0 chr2 28837457 28837761 -224418822 + AluSx SINE Alu 1 305 -7 2230 101 7 3 chr2 28837764 28838070 -224418513 + AluSc SINE Alu 1 307 -2 334 266 176 75 chr2 28838436 28838747 -224417836 + MLT1K LTR MaLR 11 370 -218 1311 205 28 6 chr2 28838747 28839064 -224417519 - MER33 DNA MER1_type 0 324 1 334 266 176 75 chr2 28839064 28839139 -224417444 + MLT1K LTR MaLR 370 436 -152 1726 134 19 0 chr2 28839321 28839628 -224416955 - L1MB8 LINE L1 -189 5989 5677 1089 247 141 37 chr2 28839759 28840220 -224416363 - MLT1E LTR MaLR 0 593 85 490 255 21 21 chr2 28840327 28840468 -224416115 + L2 LINE L2 3158 3298 -15 195 42 0 0 chr2 28840469 28840493 -224416090 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 2380 113 0 0 chr2 28840597 28840907 -224415676 - AluSx SINE Alu -2 310 1 3476 146 43 0 chr2 28841060 28841670 -224414913 - L1MB2 LINE L1 -14 6157 5522 216 306 0 0 chr2 28841868 28841917 -224414666 - L3 LINE CR1 -1328 249 201 317 299 15 0 chr2 28842787 28842921 -224413662 - L1MEc LINE L1 -4950 1446 1311 734 96 0 10 chr2 28845451 28845555 -224411028 - AluSp SINE Alu -210 103 1 2128 67 15 0 chr2 28845719 28846027 -224410556 - AluY SINE Alu 0 325 14 387 0 0 0 chr2 28846162 28846205 -224410378 + (TG)n Simple_repeat Simple_repeat 2 44 0 202 374 0 22 chr2 28846308 28846399 -224410184 + L2 LINE L2 3225 3313 0 2317 108 3 0 chr2 28847054 28847396 -224409187 - L1PA7 LINE L1 -1844 4302 3960 7020 71 35 1 chr2 28847398 28849161 -224407422 + L1PA7 LINE L1 4313 6135 -19 554 102 0 11 chr2 28849161 28849249 -224407334 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 403 37 0 0 chr2 28849349 28849403 -224407180 + AluSp/q SINE Alu 247 300 -13 4453 86 5 7 chr2 28851425 28852471 -224404112 - L1PA8A LINE L1 -411 5720 4676 611 263 198 9 chr2 28853713 28853930 -224402653 + MIR SINE MIR 5 262 0 1113 236 59 34 chr2 28854765 28855206 -224401377 - L1M4 LINE L1 -1626 4520 4069 237 229 0 99 chr2 28855206 28855337 -224401246 - L1M4 LINE L1 -2346 3800 3683 261 314 36 71 chr2 28855800 28855940 -224400643 - MIR3 SINE MIR -17 191 57 310 297 65 33 chr2 28856413 28856563 -224400020 - MIR SINE MIR -62 146 40 2154 99 3 0 chr2 28856820 28857104 -224399479 + AluSc SINE Alu 2 286 -23 29 28 0 0 chr2 28857376 28857412 -224399171 + AT_rich Low_complexity Low_complexity 1 36 0 318 235 83 36 chr2 28857650 28857780 -224398803 + MIR SINE MIR 31 164 -65 272 301 65 0 chr2 28858342 28858435 -224398148 - L2 LINE L2 -16 3297 3199 804 175 78 6 chr2 28858607 28858773 -224397810 - MER5B DNA MER1_type 0 178 1 2205 102 7 3 chr2 28859411 28859704 -224396879 + AluSx SINE Alu 1 294 -18 557 260 122 29 chr2 28859795 28860119 -224396464 - L1MCb LINE L1 -5791 254 46 328 277 0 84 chr2 28860822 28860941 -224395642 - MIR SINE MIR -134 128 20 2410 80 0 3 chr2 28861658 28861958 -224394625 + AluSx SINE Alu 3 301 -11 265 267 130 23 chr2 28862470 28862601 -224393982 + L1ME3A LINE L1 6018 6162 -8 2166 105 0 66 chr2 28862795 28863129 -224393454 + AluSx SINE Alu 1 312 0 25 0 0 0 chr2 28863314 28863339 -224393244 + AT_rich Low_complexity Low_complexity 1 25 0 2090 211 143 2 chr2 28863381 28863869 -224392714 - MLT1F1 LTR MaLR 0 567 11 2055 96 57 0 chr2 28863888 28864168 -224392415 - AluSq SINE Alu -17 296 1 203 184 0 0 chr2 28864200 28864238 -224392345 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 181 279 35 35 chr2 28864458 28864544 -224392039 - L2 LINE L2 -310 2962 2877 193 317 79 30 chr2 28864754 28864855 -224391728 + L2 LINE L2 3193 3298 -15 26 50 0 0 chr2 28864865 28864905 -224391678 + AT_rich Low_complexity Low_complexity 1 40 0 340 153 0 34 chr2 28866243 28866302 -224390281 - L2 LINE L2 -1 3312 3256 412 234 71 35 chr2 28866639 28866780 -224389803 + MIR SINE MIR 116 261 -1 890 184 0 7 chr2 28866819 28866971 -224389612 - FRAM SINE Alu -20 156 6 1162 23 0 0 chr2 28867483 28867615 -224388968 - AluYa5/8 SINE Alu -9 302 171 316 275 61 46 chr2 28867844 28867975 -224388608 + MIR SINE MIR 17 149 -113 764 198 84 55 chr2 28868168 28868441 -224388142 - L1MC5 LINE L1 -435 7526 7246 477 245 84 21 chr2 28868648 28868791 -224387792 + L2 LINE L2 3162 3313 0 261 0 0 0 chr2 28869886 28869915 -224386668 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1574 189 18 0 chr2 28869917 28870192 -224386391 - AluJo SINE Alu -31 281 2 7549 29 5 0 chr2 28870618 28871777 -224384806 + L1PA5 LINE L1 4983 6145 -9 262 386 44 0 chr2 28872062 28872220 -224384363 + MIR SINE MIR 13 177 -85 780 176 28 60 chr2 28872629 28872845 -224383738 - L1MC4 LINE L1 -152 7890 7682 529 116 23 12 chr2 28872879 28872965 -224383618 - FLAM SINE Alu -16 127 41 1541 213 80 4 chr2 28872982 28873471 -224383112 - L1MC4 LINE L1 -363 7679 6990 694 177 19 32 chr2 28873478 28873636 -224382947 - L1MC4 LINE L1 -1410 6632 6477 254 372 105 21 chr2 28873806 28874139 -224382444 + L2 LINE L2 2600 2960 -354 30 0 0 0 chr2 28875962 28875992 -224380591 + AT_rich Low_complexity Low_complexity 1 30 0 210 238 0 0 chr2 28876119 28876161 -224380422 + L2 LINE L2 3264 3305 -8 273 241 17 0 chr2 28876356 28876414 -224380169 - MIR3 SINE MIR -3 205 147 1389 235 108 38 chr2 28876454 28876982 -224379601 - L1MC4a LINE L1 -1680 6128 5564 253 164 233 27 chr2 28876986 28877059 -224379524 - MIR SINE MIR -116 146 59 600 285 19 94 chr2 28877065 28877321 -224379262 + L2 LINE L2 3035 3271 -1 425 311 122 39 chr2 28877427 28877713 -224378870 + L3 LINE CR1 856 1165 -412 356 348 43 7 chr2 28877748 28877889 -224378694 - MIR SINE MIR -109 153 8 224 221 0 15 chr2 28878519 28878587 -224377996 + CT-rich Low_complexity Low_complexity 3 69 0 337 271 124 23 chr2 28878606 28878783 -224377800 - L1ME LINE L1 -407 5714 5520 277 275 81 34 chr2 28879934 28880254 -224376329 - L1ME LINE L1 -1555 4591 4257 305 333 146 19 chr2 28881236 28881557 -224375026 - L1ME LINE L1 -2201 3945 3584 2197 92 0 38 chr2 28881990 28882305 -224374278 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr2 28884080 28884103 -224372480 + AT_rich Low_complexity Low_complexity 1 23 0 2255 102 0 16 chr2 28884247 28884561 -224372022 + AluSx SINE Alu 1 309 -3 25 31 0 0 chr2 28884752 28884784 -224371799 + AT_rich Low_complexity Low_complexity 1 32 0 1185 186 219 0 chr2 28884862 28885104 -224371479 - AluJb SINE Alu -7 295 1 485 286 44 118 chr2 28888032 28888395 -224368188 - MER102b DNA MER1_type -5 336 1 1131 112 10 36 chr2 28889728 28889924 -224366659 - AluSq SINE Alu -18 295 105 990 153 31 0 chr2 28890678 28890841 -224365742 - MER58B DNA MER1_type 0 341 174 836 78 0 0 chr2 28890843 28890959 -224365624 + L1MA5A LINE L1 6178 6293 -4 262 229 0 0 chr2 28891035 28891083 -224365500 - MER58B DNA MER1_type -292 49 2 253 264 7 101 chr2 28891327 28891390 -224365193 + MIR SINE MIR 97 140 -122 1641 176 35 67 chr2 28891390 28891764 -224364819 + MLT1A1 LTR MaLR 4 365 0 253 264 7 101 chr2 28891764 28891848 -224364735 + MIR SINE MIR 140 230 -32 2996 131 4 0 chr2 28891926 28892384 -224364199 + L1PA15 LINE L1 5706 6165 0 2988 194 25 56 chr2 28892598 28893366 -224363217 + L1MA9 LINE L1 5544 6287 -25 22 0 0 0 chr2 28893410 28893432 -224363151 + AT_rich Low_complexity Low_complexity 1 22 0 549 319 16 11 chr2 28893995 28894177 -224362406 - L3 LINE CR1 -364 1213 1031 226 313 192 37 chr2 28894715 28894811 -224361772 - L2 LINE L2 -189 3083 3003 2322 78 7 3 chr2 28894811 28895106 -224361477 + AluY SINE Alu 1 296 -15 226 313 192 37 chr2 28895106 28895223 -224361360 - L2 LINE L2 -269 3003 2837 204 40 0 0 chr2 28895502 28895527 -224361056 + (TA)n Simple_repeat Simple_repeat 2 26 0 916 193 99 12 chr2 28895656 28895899 -224360684 + MER5C DNA MER1_type 60 323 -1 22 0 0 0 chr2 28896051 28896073 -224360510 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr2 28896143 28896167 -224360416 + AT_rich Low_complexity Low_complexity 1 24 0 794 221 149 0 chr2 28896543 28896751 -224359832 + Charlie1 DNA MER1_type 1 239 -2522 4635 229 38 10 chr2 28896809 28898062 -224358521 + L1M4 LINE L1 3488 4774 -1372 275 341 77 0 chr2 28898182 28898273 -224358310 + L3 LINE CR1 63 160 -1417 796 309 146 12 chr2 28898316 28898801 -224357782 + L3 LINE CR1 264 813 -764 786 229 240 4 chr2 28900110 28900368 -224356215 - L1MD2 LINE L1 -11 6348 6030 2160 141 141 21 chr2 28900607 28900983 -224355600 - MSTC LTR MaLR 0 428 8 230 366 8 8 chr2 28901923 28902054 -224354529 - L2 LINE L2 -1407 1907 1777 1251 146 87 78 chr2 28902247 28902568 -224354015 + MER33 DNA MER1_type 1 324 0 264 272 0 48 chr2 28904010 28904038 -224352545 + LTR67 LTR ERVL 456 553 -4 314 213 27 27 chr2 28904038 28904113 -224352470 + MLT1K LTR MaLR 510 584 -4 357 253 154 6 chr2 28904136 28904298 -224352285 + L2 LINE L2 3116 3301 -12 197 33 33 0 chr2 28904299 28904329 -224352254 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1453 274 94 26 chr2 28904381 28905041 -224351542 - L1MC4a LINE L1 -1643 6165 5461 488 301 51 0 chr2 28905042 28905198 -224351385 + L1ME LINE L1 308 471 -5901 * 620 278 69 18 chr2 28905187 28905464 -224351119 + L1ME LINE L1 1198 1488 -4896 3828 163 1 1 chr2 28905673 28906330 -224350253 - L1PA16 LINE L1 -1 6165 5509 475 272 81 0 chr2 28906357 28906493 -224350090 + L2 LINE L2 3167 3313 0 328 277 40 61 chr2 28906497 28906645 -224349938 + MIR SINE MIR 47 191 -71 2816 10 0 0 chr2 28907592 28907900 -224348683 - AluYa5 SINE Alu -3 308 1 358 311 98 6 chr2 28908896 28909060 -224347523 + L2 LINE L2 2862 3040 -273 471 270 73 0 chr2 28909087 28909224 -224347359 - L2 LINE L2 -564 2750 2604 1968 86 11 39 chr2 28909327 28909606 -224346977 - AluY SINE Alu -40 271 1 237 259 0 0 chr2 28910685 28910739 -224345844 - L2 LINE L2 -838 2476 2423 2292 161 17 128 chr2 28910752 28911344 -224345239 + Tigger7 DNA MER2_type 1 526 -1961 542 204 0 11 chr2 28911338 28911431 -224345152 + Tigger7 DNA MER2_type 2400 2491 0 * 449 262 63 46 chr2 28911439 28911676 -224344907 - L2 LINE L2 -882 2432 2192 242 125 21 0 chr2 28911680 28911728 -224344855 + CT-rich Low_complexity Low_complexity 2 50 0 372 294 79 8 chr2 28912966 28913092 -224343491 + MIR3 SINE MIR 67 201 -7 682 223 94 40 chr2 28915203 28915427 -224341156 + MIR SINE MIR 12 247 -15 224 361 58 24 chr2 28916227 28916432 -224340151 + L2 LINE L2 1194 1405 -1909 268 218 73 0 chr2 28919293 28919348 -224337235 - L2 LINE L2 0 3272 3214 417 263 86 119 chr2 28919679 28919919 -224336664 + L1P4 LINE L1 5297 5543 -618 2397 69 3 0 chr2 28919919 28920246 -224336337 - AluSx SINE Alu 0 328 1 417 263 86 119 chr2 28920246 28920579 -224336004 + L1P4 LINE L1 5543 5847 -314 25 0 0 28 chr2 28920778 28920799 -224335784 + AT_rich Low_complexity Low_complexity 1 22 -13 7742 16 13 0 chr2 28920799 28921864 -224334719 - L1PA3 LINE L1 -3 6152 5083 25 0 0 28 chr2 28921864 28921878 -224334705 + AT_rich Low_complexity Low_complexity 22 35 0 402 332 152 23 chr2 28921879 28922228 -224334355 - L2 LINE L2 -1230 2084 1691 2419 56 0 20 chr2 28922462 28922765 -224333818 - AluY SINE Alu -14 297 1 210 246 87 43 chr2 28925043 28925112 -224331471 + L2 LINE L2 3186 3257 -15 1564 144 16 19 chr2 28925114 28925371 -224331212 - AluJo SINE Alu -20 292 37 2108 113 0 3 chr2 28925384 28925694 -224330889 - AluSx SINE Alu 0 309 1 2765 7 0 0 chr2 28925706 28926034 -224330549 - AluYa5 SINE Alu 0 328 1 641 258 100 29 chr2 28926094 28926334 -224330249 + MIR SINE MIR 2 258 -4 2537 64 0 0 chr2 28926780 28927091 -224329492 - AluY SINE Alu 0 311 1 273 383 48 13 chr2 28927155 28927385 -224329198 + L2 LINE L2 2852 3089 -183 25 51 0 0 chr2 28927397 28927436 -224329147 + AT_rich Low_complexity Low_complexity 1 39 0 586 259 144 10 chr2 28978919 28979120 -224277463 + MIR SINE MIR 35 262 0 244 269 45 13 chr2 28980520 28980678 -224275905 + MIR SINE MIR 13 244 -18 308 271 50 50 chr2 28980935 28981075 -224275508 - MIR SINE MIR -70 192 53 325 148 25 37 chr2 28981409 28981490 -224275093 + G-rich Low_complexity Low_complexity 1 80 0 225 323 131 10 chr2 28981504 28981573 -224275010 + MIR SINE MIR 21 107 -155 243 0 0 0 chr2 28981573 28981600 -224274983 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 225 323 131 10 chr2 28981600 28981629 -224274954 + MIR SINE MIR 107 131 -131 183 156 0 0 chr2 28981757 28981789 -224274794 + T-rich Low_complexity Low_complexity 4 35 0 1493 187 52 0 chr2 28981828 28981978 -224274605 - AluJo SINE Alu -31 281 109 245 51 26 0 chr2 28981978 28982017 -224274566 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1493 187 52 0 chr2 28982017 28982133 -224274450 - AluJo SINE Alu -203 109 1 868 146 79 18 chr2 28982367 28982532 -224274051 + MER53 DNA DNA 1 175 -14 215 215 15 62 chr2 28983936 28984001 -224272582 + MIR SINE MIR 85 146 -116 1220 132 0 0 chr2 28984207 28984374 -224272209 - AluSg/x SINE Alu -12 300 134 2419 75 0 16 chr2 28984374 28984680 -224271903 - AluSg SINE Alu -9 301 1 29 60 0 0 chr2 28985304 28985354 -224271229 + AT_rich Low_complexity Low_complexity 1 50 0 812 140 0 0 chr2 28985999 28986113 -224270470 - AluSq/x SINE Alu -199 114 1 1473 183 57 47 chr2 28986113 28986444 -224270139 - L1M4 LINE L1 -1436 4710 4373 2161 150 0 0 chr2 28986444 28986751 -224269832 - AluSx SINE Alu -3 309 3 1473 183 57 47 chr2 28986751 28986823 -224269760 - L1M4 LINE L1 -1773 4373 4303 2323 65 0 39 chr2 28986840 28987149 -224269434 - AluY SINE Alu -14 297 1 903 148 0 0 chr2 28988055 28988190 -224268393 + AluSq/x SINE Alu 1 135 -177 1926 91 84 15 chr2 28988200 28988474 -224268109 + AluSx SINE Alu 10 302 -10 493 322 173 24 chr2 28988871 28989241 -224267342 + L2 LINE L2 2848 3272 0 2467 65 0 0 chr2 28989698 28989988 -224266595 + AluY SINE Alu 1 290 -21 286 299 8 63 chr2 28990052 28990179 -224266404 + MIR SINE MIR 25 144 -64 472 213 0 32 chr2 28990213 28990307 -224266276 + AluJ/FLAM SINE Alu 2 92 -220 2492 87 3 0 chr2 28990489 28990801 -224265782 - AluSp SINE Alu 0 313 1 211 341 99 11 chr2 28991180 28991271 -224265312 - L2 LINE L2 -20 3252 3154 373 263 12 0 chr2 28991280 28991360 -224265223 + MER58 DNA MER1_type 1 81 -134 195 114 0 0 chr2 28991360 28991395 -224265188 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1794 136 0 4 chr2 28991398 28991656 -224264927 - AluSx SINE Alu -30 282 26 1692 212 18 68 chr2 28991757 28991814 -224264769 - L1ME LINE L1 -407 5759 5701 1688 180 44 3 chr2 28991814 28992108 -224264475 + AluJo SINE Alu 1 306 -6 2262 114 0 0 chr2 28992108 28992415 -224264168 + AluSx SINE Alu 1 308 -4 1692 212 18 68 chr2 28992415 28992814 -224263769 - L1ME LINE L1 -463 5703 5325 1224 160 9 43 chr2 28992816 28992992 -224263591 - AluJb SINE Alu -2 310 129 2299 95 0 3 chr2 28992992 28993287 -224263296 - AluSc SINE Alu -15 294 1 2322 108 7 0 chr2 28993289 28993596 -224262987 - AluSc SINE Alu 0 309 1 1224 160 9 43 chr2 28993596 28993647 -224262936 - AluJb SINE Alu -184 128 88 1534 237 97 0 chr2 28993658 28994113 -224262470 - L1ME LINE L1 -825 5321 4823 1603 115 13 4 chr2 28994115 28994341 -224262242 - AluSg/x SINE Alu -15 297 70 817 230 94 62 chr2 28994542 28994651 -224261932 + L1MD2 LINE L1 6027 6131 -228 198 103 0 0 chr2 28994651 28994680 -224261903 + (CA)n Simple_repeat Simple_repeat 2 30 0 817 230 94 62 chr2 28994680 28994879 -224261704 + L1MD2 LINE L1 6131 6345 -14 1999 125 3 32 chr2 28995596 28995907 -224260676 - AluJb SINE Alu -10 302 1 195 184 26 0 chr2 28996706 28996744 -224259839 - L2 LINE L2 -2 3311 3273 645 282 126 38 chr2 28996816 28997254 -224259329 + L2 LINE L2 2769 3247 -66 514 282 46 40 chr2 28997508 28997682 -224258901 - MIR SINE MIR -74 188 14 3514 193 116 30 chr2 28998030 28998987 -224257596 - L1MC4 LINE L1 0 8042 7004 1312 258 115 0 chr2 28999050 28999415 -224257168 - MLT1E2 LTR MaLR 0 626 220 605 223 133 70 chr2 28999551 28999738 -224256845 - L1MC5 LINE L1 -44 7917 7743 1860 151 6 31 chr2 28999738 29000057 -224256526 - AluJo SINE Alu -1 311 1 605 223 133 70 chr2 29000057 29000214 -224256369 - L1MC5 LINE L1 -218 7743 7551 2167 124 0 3 chr2 29000304 29000595 -224255988 - AluSx SINE Alu -22 290 1 1923 176 0 0 chr2 29000674 29000986 -224255597 - AluJb SINE Alu 0 312 1 1447 194 46 135 chr2 29000991 29001516 -224255067 - Charlie4a DNA MER1_type 0 508 31 206 277 31 15 chr2 29001606 29001671 -224254912 - MIR SINE MIR -103 105 40 2446 92 0 0 chr2 29001710 29002014 -224254569 - AluSx SINE Alu -8 304 1 462 226 43 0 chr2 29002213 29002328 -224254255 - L1ME1 LINE L1 -3 6163 6044 1854 173 6 6 chr2 29002717 29003029 -224253554 - AluJo SINE Alu 0 312 1 2383 140 6 11 chr2 29003363 29003713 -224252870 - MER7A DNA MER2_type 0 346 1 435 325 30 20 chr2 29005015 29005215 -224251368 + MIR SINE MIR 20 221 -41 512 296 49 0 chr2 29006521 29006663 -224249920 + MER91A DNA MER1_type 21 169 -27 229 290 72 0 chr2 29006669 29006738 -224249845 + MER91A DNA MER1_type 123 196 0 249 217 33 109 chr2 29007448 29007494 -224249089 - MIR3 SINE MIR -7 201 164 1062 225 14 9 chr2 29007494 29007716 -224248867 - MER58A DNA MER1_type 0 224 2 249 217 33 109 chr2 29007716 29007761 -224248822 - MIR3 SINE MIR -44 164 117 333 0 0 0 chr2 29009265 29009302 -224247281 + (TG)n Simple_repeat Simple_repeat 2 38 0 326 232 21 0 chr2 29009804 29009899 -224246684 + CT-rich Low_complexity Low_complexity 4 100 0 289 250 116 9 chr2 29010192 29010304 -224246279 + MIR3 SINE MIR 53 176 -32 218 254 63 16 chr2 29010850 29010913 -224245670 - L2 LINE L2 0 3272 3207 27 0 0 0 chr2 29011126 29011153 -224245430 + AT_rich Low_complexity Low_complexity 1 27 0 222 339 42 92 chr2 29011465 29011725 -224244858 - L2 LINE L2 -22 3250 3004 2402 87 0 3 chr2 29012622 29012922 -224243661 - AluSq SINE Alu -12 301 3 351 264 66 26 chr2 29012976 29013203 -224243380 - L1MC5 LINE L1 -182 7779 7544 532 289 171 5 chr2 29013588 29013799 -224242784 + MIR SINE MIR 1 246 -16 1965 142 14 10 chr2 29013800 29014096 -224242487 - AluSx SINE Alu -15 297 1 2053 123 23 7 chr2 29015009 29015309 -224241274 - AluSq SINE Alu -8 305 1 2298 109 0 0 chr2 29016319 29016630 -224239953 + AluY SINE Alu 1 311 0 450 247 107 65 chr2 29016637 29016900 -224239683 + L1MEc LINE L1 1850 2123 -4273 350 260 88 103 chr2 29016912 29017251 -224239332 + L2 LINE L2 2851 3184 -129 1468 161 58 8 chr2 29017286 29017546 -224239037 + AluJb SINE Alu 1 273 -39 268 217 167 0 chr2 29017700 29017760 -224238823 - MER58 DNA MER1_type -1 2419 2350 262 352 82 38 chr2 29017932 29018091 -224238492 - L2 LINE L2 0 3272 3107 541 349 100 40 chr2 29018165 29018795 -224237788 - L2 LINE L2 -342 2972 2305 250 125 0 0 chr2 29019152 29019192 -224237391 + L1MB4 LINE L1 5892 5931 -249 189 107 0 0 chr2 29019210 29019238 -224237345 + (A)n Simple_repeat Simple_repeat 1 28 0 22 0 0 0 chr2 29019264 29019286 -224237297 + AT_rich Low_complexity Low_complexity 1 22 0 755 233 87 23 chr2 29019310 29019529 -224237054 - MIR SINE MIR -13 249 17 264 375 80 0 chr2 29020310 29020398 -224236185 - L2 LINE L2 -25 3247 3153 2185 90 35 0 chr2 29021233 29021521 -224235062 + AluSx SINE Alu 1 298 -14 228 240 0 20 chr2 29021697 29021747 -224234836 + (CA)n Simple_repeat Simple_repeat 1 49 0 1103 153 0 0 chr2 29022062 29022225 -224234358 - AluSg/x SINE Alu -11 301 139 2125 119 0 3 chr2 29022519 29022813 -224233770 + AluSq SINE Alu 1 293 -20 2285 112 0 3 chr2 29023912 29024217 -224232366 - AluSg SINE Alu -6 304 1 831 169 0 8 chr2 29024450 29024580 -224232003 - FLAM_C SINE Alu -4 129 1 288 176 15 59 chr2 29025388 29025456 -224231127 + MLT1L LTR MaLR 2 66 -549 742 241 256 9 chr2 29025514 29025838 -224230745 + MLT1L LTR MaLR 200 603 -12 1482 89 0 5 chr2 29026700 29026891 -224229692 - AluSq SINE Alu -9 304 115 236 262 9 84 chr2 29027262 29027369 -224229214 - MIR SINE MIR -46 216 118 1176 140 21 72 chr2 29027525 29027584 -224228999 - L1MD1 LINE L1 -10 6232 6172 2277 128 0 0 chr2 29027584 29027897 -224228686 + AluSq SINE Alu 1 313 0 1176 140 21 72 chr2 29027897 29028073 -224228510 - L1MD1 LINE L1 -70 6172 6009 357 24 0 0 chr2 29028135 29028177 -224228406 + (CA)n Simple_repeat Simple_repeat 2 43 0 521 184 132 7 chr2 29028435 29028571 -224228012 - MLT1J2 LTR MaLR -278 172 20 557 243 98 55 chr2 29028571 29028826 -224227757 + L1ME3A LINE L1 5685 5950 -220 583 187 89 16 chr2 29028901 29029024 -224227559 + FLAM_A SINE Alu 2 133 0 26 30 0 0 chr2 29030739 29030772 -224225811 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr2 29030893 29030913 -224225670 + (A)n Simple_repeat Simple_repeat 1 20 0 1512 214 89 3 chr2 29032007 29032320 -224224263 + MER58B DNA MER1_type 1 340 -1 730 290 82 51 chr2 29032450 29032840 -224223743 - L2 LINE L2 -13 3300 2899 357 264 95 10 chr2 29032916 29033158 -224223425 - L2 LINE L2 -815 2499 2185 444 217 40 86 chr2 29033803 29033955 -224222628 + MER5A DNA MER1_type 7 151 -38 587 287 66 11 chr2 29035273 29035488 -224221095 + MIR SINE MIR 38 262 0 194 291 81 12 chr2 29035522 29035608 -224220975 - L3b LINE CR1 -223 1360 1269 2266 113 0 16 chr2 29035615 29035926 -224220657 - AluSx SINE Alu -6 306 1 1878 137 29 29 chr2 29036475 29036781 -224219802 + AluJb SINE Alu 3 308 -4 757 241 65 5 chr2 29037038 29037274 -224219309 + MIR SINE MIR 2 249 -13 1364 239 7 7 chr2 29037833 29038143 -224218440 - AluJo SINE Alu 0 312 3 606 279 93 8 chr2 29038985 29039222 -224217361 - MIR SINE MIR 0 262 6 229 257 184 33 chr2 29039257 29039409 -224217174 - MIR SINE MIR -13 249 75 955 85 16 23 chr2 29039860 29039989 -224216594 - FLAM_C SINE Alu -4 129 2 2389 94 0 0 chr2 29040078 29040376 -224216207 - AluSg SINE Alu -12 298 1 2035 108 7 0 chr2 29042443 29042722 -224213861 - AluSx SINE Alu -4 308 28 192 77 0 0 chr2 29043181 29043207 -224213376 + (CA)n Simple_repeat Simple_repeat 2 27 0 243 153 119 0 chr2 29043402 29043461 -224213122 - L1ME3 LINE L1 -210 5952 5887 26 30 0 0 chr2 29043479 29043512 -224213071 + AT_rich Low_complexity Low_complexity 1 33 0 2073 126 10 7 chr2 29043631 29043940 -224212643 + AluSx SINE Alu 1 310 -2 200 56 83 0 chr2 29043956 29043992 -224212591 + GA-rich Low_complexity Low_complexity 2 40 0 1135 279 97 29 chr2 29044042 29044699 -224211884 - L1ME3 LINE L1 -259 5903 5380 203 311 81 27 chr2 29044700 29044774 -224211809 - L2 LINE L2 -43 3229 3152 232 143 0 0 chr2 29045219 29045254 -224211329 - MLT1D LTR MaLR -470 35 1 555 329 88 8 chr2 29045821 29046061 -224210522 + MIR SINE MIR 4 262 0 240 149 0 0 chr2 29046176 29046223 -224210360 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1719 167 32 0 chr2 29046301 29046583 -224210000 + AluJo SINE Alu 3 293 -19 270 136 0 0 chr2 29046741 29046785 -224209798 + (TC)n Simple_repeat Simple_repeat 1 44 0 502 264 0 23 chr2 29047942 29048071 -224208512 - MLT1D LTR MaLR -349 156 31 198 0 0 0 chr2 29050504 29050526 -224206057 + (A)n Simple_repeat Simple_repeat 1 22 0 2876 176 36 52 chr2 29051251 29051889 -224204694 - L1ME1 LINE L1 -137 6029 5402 3769 196 32 39 chr2 29051891 29052205 -224204378 - L1ME1 LINE L1 -801 5345 5030 1823 150 59 83 chr2 29052205 29052362 -224204221 + MLT1A1 LTR MaLR 1 160 -205 2168 122 3 0 chr2 29052362 29052650 -224203933 - AluSp SINE Alu -24 289 1 1823 150 59 83 chr2 29052650 29052866 -224203717 + MLT1A1 LTR MaLR 160 365 0 3769 196 32 39 chr2 29052866 29053531 -224203052 - L1ME1 LINE L1 -1116 5030 4373 223 158 0 0 chr2 29053547 29053585 -224202998 - L2 LINE L2 -9 3304 3267 2243 103 3 0 chr2 29053842 29054134 -224202449 - AluSx SINE Alu -17 295 3 2270 99 0 7 chr2 29055089 29055381 -224201202 + AluSx SINE Alu 3 292 -20 318 50 0 0 chr2 29055670 29055710 -224200873 + (CA)n Simple_repeat Simple_repeat 1 40 0 636 138 0 0 chr2 29056143 29056259 -224200324 + (TC)n Simple_repeat Simple_repeat 1 116 0 4221 53 12 0 chr2 29056265 29056757 -224199826 - L1PA5 LINE L1 -5 6149 5652 252 229 145 53 chr2 29058169 29058300 -224198283 - L1MC5 LINE L1 -58 7903 7761 755 118 100 0 chr2 29058416 29058526 -224198057 + FLAM_C SINE Alu 2 122 -21 260 164 15 0 chr2 29058531 29058598 -224197985 + GA-rich Low_complexity Low_complexity 2 69 0 2498 68 0 0 chr2 29058739 29059035 -224197548 - AluY SINE Alu -15 296 1 241 254 99 0 chr2 29059226 29059297 -224197286 + L2 LINE L2 3159 3236 -36 519 148 0 11 chr2 29059593 29059681 -224196902 - AluSg/x SINE Alu -7 302 216 620 278 64 6 chr2 29060451 29060624 -224195959 + MER5A DNA MER1_type 1 183 -6 275 356 24 87 chr2 29063009 29063298 -224193285 + L2 LINE L2 2981 3251 -21 209 152 0 0 chr2 29064025 29064058 -224192525 - L2 LINE L2 -9 3304 3272 2145 97 3 17 chr2 29064446 29064735 -224191848 - AluSc SINE Alu -24 285 1 253 344 11 11 chr2 29064745 29064835 -224191748 + MIR SINE MIR 18 107 -155 350 110 22 44 chr2 29064998 29065089 -224191494 + L1ME LINE L1 5346 5434 -687 580 288 23 104 chr2 29065872 29066306 -224190277 - L2 LINE L2 0 3272 2874 2085 110 13 23 chr2 29066326 29066626 -224189957 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr2 29066706 29066726 -224189857 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1409 191 11 14 chr2 29066728 29067011 -224189572 - AluJo SINE Alu -30 282 1 2104 99 0 11 chr2 29067934 29068237 -224188346 - AluSc SINE Alu 0 300 1 1657 171 11 21 chr2 29068405 29068722 -224187861 - AluJb SINE Alu 0 314 1 2335 108 0 6 chr2 29069114 29069428 -224187155 - AluSx SINE Alu 0 312 1 2319 97 10 0 chr2 29070613 29070912 -224185671 - AluSx SINE Alu -10 302 1 739 269 68 94 chr2 29072343 29072860 -224183723 + L1MC4 LINE L1 7004 7533 -509 1585 174 0 55 chr2 29072860 29073171 -224183412 - AluJo SINE Alu -3 309 16 739 269 68 94 chr2 29073171 29073350 -224183233 + L1MC4 LINE L1 7533 7715 -327 2402 98 0 0 chr2 29073350 29073657 -224182926 + AluSq SINE Alu 1 307 -6 739 269 68 94 chr2 29073657 29074035 -224182548 + L1MC4 LINE L1 7715 8040 -2 2261 103 7 0 chr2 29074265 29074555 -224182028 - AluSg SINE Alu -18 292 1 541 298 22 28 chr2 29075311 29075489 -224181094 - MIR SINE MIR -66 196 20 1372 143 0 52 chr2 29075881 29076111 -224180472 + MER20 DNA MER1_type 1 218 -1 248 368 60 8 chr2 29078090 29078223 -224178360 + MIR3 SINE MIR 13 152 -56 1324 103 0 5 chr2 29079054 29079239 -224177344 - AluSp SINE Alu 0 313 130 348 318 226 0 chr2 29079807 29080024 -224176559 + L3 LINE CR1 1307 1572 -5 436 260 83 30 chr2 29080915 29081084 -224175499 - MIR3 SINE MIR -1 207 30 261 268 268 9 chr2 29081683 29081795 -224174788 - MIR3 SINE MIR -31 177 37 425 289 53 83 chr2 29081837 29081925 -224174658 + MIR SINE MIR 20 109 -153 1933 116 0 96 chr2 29081925 29082260 -224174323 + AluJb SINE Alu 1 303 -9 425 289 53 83 chr2 29082260 29082399 -224174184 + MIR SINE MIR 109 240 -22 451 173 370 25 chr2 29082418 29082580 -224174003 + MER112 DNA MER1_type 4 221 -39 303 287 57 33 chr2 29084418 29084540 -224172043 - L2 LINE L2 -7 3265 3141 2296 108 0 0 chr2 29085601 29085906 -224170677 - AluSx SINE Alu -7 305 1 304 314 103 27 chr2 29086072 29086257 -224170326 + MIR SINE MIR 9 207 -55 1110 212 5 0 chr2 29087464 29087667 -224168916 + MER58A DNA MER1_type 1 204 -20 541 363 0 0 chr2 29088484 29088619 -224167964 - L2 LINE L2 -1 3271 3137 261 0 0 0 chr2 29088846 29088875 -224167708 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2081 125 0 0 chr2 29088877 29089157 -224167426 - AluSx SINE Alu -32 280 1 180 189 176 27 chr2 29090614 29090688 -224165895 - MIR SINE MIR -68 194 110 445 292 159 10 chr2 29091144 29091339 -224165244 + MIR SINE MIR 12 235 -27 22 35 0 0 chr2 29091861 29091890 -224164693 + AT_rich Low_complexity Low_complexity 1 29 0 505 283 7 7 chr2 29093841 29093986 -224162597 - L2 LINE L2 -1 3312 3168 2206 116 0 25 chr2 29094335 29094655 -224161928 - AluSx SINE Alu 0 312 1 2173 142 64 6 chr2 29094693 29095052 -224161531 + MLT1B LTR MaLR 11 390 0 533 256 109 42 chr2 29095311 29095712 -224160871 + LTR33 LTR ERVL 49 513 -8 282 377 43 0 chr2 29095712 29095850 -224160733 - L2 LINE L2 -974 2340 2197 2241 85 0 0 chr2 29096232 29096559 -224160024 + AluSx SINE Alu 2 328 0 591 243 33 13 chr2 29096681 29096833 -224159750 - MIR SINE MIR -48 214 60 21 36 0 0 chr2 29098068 29098096 -224158487 + AT_rich Low_complexity Low_complexity 1 28 0 288 271 0 0 chr2 29098134 29098204 -224158379 + L1ME LINE L1 5563 5632 -489 1678 164 27 24 chr2 29098314 29098612 -224157971 + AluJo SINE Alu 1 299 -13 30 27 0 0 chr2 29098912 29098949 -224157634 + AT_rich Low_complexity Low_complexity 1 37 0 315 237 0 54 chr2 29099890 29099983 -224156600 - L1MC4a LINE L1 -1892 5916 5829 206 330 91 0 chr2 29100199 29100287 -224156296 + L3 LINE CR1 1407 1502 -75 180 0 0 0 chr2 29100883 29100903 -224155680 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 302 0 26 0 chr2 29100907 29100945 -224155638 + (TG)n Simple_repeat Simple_repeat 2 40 0 1867 233 5 16 chr2 29101641 29102019 -224154564 - MLT1A2 LTR MaLR 0 374 1 352 245 0 21 chr2 29103070 29103164 -224153419 - L2 LINE L2 -63 3250 3159 15678 166 24 52 chr2 29103207 29105107 -224151476 + L1MA4A LINE L1 1 1954 -5411 2290 126 0 0 chr2 29105107 29105416 -224151167 + AluSx SINE Alu 1 309 -3 15678 166 24 52 chr2 29105416 29110573 -224146010 + L1MA4A LINE L1 1954 7294 -71 2197 85 0 24 chr2 29110674 29110967 -224145616 - AluY SINE Alu -25 286 1 266 260 68 0 chr2 29111950 29112023 -224144560 + L2 LINE L2 3230 3307 -6 22 0 0 0 chr2 29112423 29112445 -224144138 + AT_rich Low_complexity Low_complexity 1 22 0 2055 119 0 7 chr2 29113260 29113572 -224143011 - AluSx SINE Alu 0 310 1 23 33 0 0 chr2 29113895 29113925 -224142658 + AT_rich Low_complexity Low_complexity 1 30 0 218 325 17 43 chr2 29114811 29114928 -224141655 + C-rich Low_complexity Low_complexity 6 119 0 472 268 142 21 chr2 29116350 29116653 -224139930 - L1ME LINE L1 -504 5617 5255 462 218 10 0 chr2 29117188 29117289 -224139294 - MIR SINE MIR -5 257 156 282 255 50 71 chr2 29117310 29117451 -224139132 + MLT1J2 LTR MaLR 23 160 -290 240 234 0 0 chr2 29117660 29117707 -224138876 + MLT1I LTR MaLR 361 407 -2 2272 108 0 10 chr2 29117721 29118026 -224138557 + AluSc SINE Alu 1 302 -7 375 121 136 0 chr2 29118031 29118097 -224138486 - MIR SINE MIR -101 161 87 436 295 16 16 chr2 29118585 29118714 -224137869 - L2 LINE L2 0 3313 3185 269 210 0 160 chr2 29119047 29119166 -224137417 + MER91A DNA MER1_type 55 154 -42 530 258 18 12 chr2 29119428 29119618 -224136965 - MIR SINE MIR 0 262 7 1618 127 57 96 chr2 29119723 29119885 -224136698 + AluJo SINE Alu 1 147 -165 189 107 0 0 chr2 29119885 29119913 -224136670 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1618 127 57 96 chr2 29119913 29120064 -224136519 + AluJo SINE Alu 147 302 -10 196 167 28 0 chr2 29120096 29120132 -224136451 + L2 LINE L2 3262 3298 -15 1571 160 4 0 chr2 29120462 29120706 -224135877 - AluJo SINE Alu -67 245 1 316 240 34 23 chr2 29121065 29121173 -224135410 - MIR SINE MIR -92 116 11 2151 123 7 0 chr2 29123722 29124023 -224132560 + AluSx SINE Alu 1 303 -9 285 235 12 37 chr2 29124137 29124218 -224132365 + MIR SINE MIR 111 189 -73 1212 176 5 23 chr2 29124715 29124931 -224131652 - AluJb SINE Alu -14 298 87 218 246 16 16 chr2 29124956 29125017 -224131566 + L2 LINE L2 3203 3263 -9 314 277 36 27 chr2 29125057 29125169 -224131414 - MIR SINE MIR -51 211 99 207 100 0 0 chr2 29126293 29126323 -224130260 + (A)n Simple_repeat Simple_repeat 1 30 0 2143 104 3 0 chr2 29127401 29127690 -224128893 - AluSx SINE Alu -22 290 1 273 172 40 101 chr2 29127783 29127882 -224128701 - HAL1 LINE L1 -2 2505 2413 244 350 150 0 chr2 29128053 29128173 -224128410 - L2 LINE L2 -8 3264 3127 414 375 112 13 chr2 29128239 29128902 -224127681 - L2 LINE L2 -251 3021 2291 2375 72 7 13 chr2 29129946 29130252 -224126331 - AluSp SINE Alu -8 305 2 1853 159 10 10 chr2 29130348 29130644 -224125939 - AluJo SINE Alu -16 296 1 273 339 115 15 chr2 29131967 29132097 -224124486 + MIR3 SINE MIR 8 150 -58 197 256 23 0 chr2 29132925 29132968 -224123615 + MIR SINE MIR 213 256 -6 2293 96 3 3 chr2 29133003 29133304 -224123279 + AluSg SINE Alu 1 301 -9 204 97 0 0 chr2 29133826 29133857 -224122726 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2695 157 55 21 chr2 29135552 29136081 -224120502 + L1MA9 LINE L1 5729 6275 -37 475 238 105 7 chr2 29136185 29136328 -224120255 - MIR SINE MIR -19 243 87 516 285 150 10 chr2 29136442 29136649 -224119934 + MIR SINE MIR 10 245 -17 448 256 17 8 chr2 29137242 29137359 -224119224 - MIR SINE MIR -126 136 19 490 264 60 22 chr2 29137412 29137594 -224118989 + MER5A DNA MER1_type 1 189 0 998 199 46 51 chr2 29137974 29138014 -224118569 - L1P LINE L1 -764 5391 5352 3200 155 11 9 chr2 29138014 29138543 -224118040 - L1MB8 LINE L1 0 6178 5649 998 199 46 51 chr2 29138543 29138766 -224117817 - L1P LINE L1 -803 5352 5132 238 270 95 7 chr2 29138937 29139074 -224117509 + L1M LINE L1 5255 5403 -956 2558 51 0 0 chr2 29139931 29140226 -224116357 - AluY SINE Alu -16 295 1 395 325 52 7 chr2 29140286 29140440 -224116143 - MER20B DNA MER1_type -616 167 7 189 354 43 26 chr2 29141953 29142105 -224114478 - MIR SINE MIR -100 108 4 488 298 42 50 chr2 29142520 29142758 -224113825 - MIR SINE MIR -6 256 21 346 291 47 68 chr2 29143140 29143288 -224113295 + MIR3 SINE MIR 20 164 -44 1948 123 11 18 chr2 29143744 29144057 -224112526 + AluSq SINE Alu 1 311 0 327 323 37 63 chr2 29144810 29144913 -224111670 - MIR SINE MIR -4 258 161 14862 110 36 1 chr2 29144913 29147755 -224108828 + L1PA10 LINE L1 3284 6168 0 327 323 37 63 chr2 29147755 29147840 -224108743 - MIR SINE MIR -101 161 75 217 321 179 14 chr2 29147866 29148006 -224108577 - MIR3 SINE MIR -43 165 3 620 282 97 9 chr2 29148543 29148759 -224107824 - MIR SINE MIR -1 261 27 2443 82 0 19 chr2 29150590 29150908 -224105675 - AluSx SINE Alu 0 312 1 240 313 96 9 chr2 29151803 29151918 -224104665 + MIR SINE MIR 84 208 -54 2710 198 137 35 chr2 29152209 29152479 -224104104 - L1ME2 LINE L1 0 6233 5992 2095 121 3 0 chr2 29152479 29152776 -224103807 + AluSx SINE Alu 1 298 -14 2710 198 137 35 chr2 29152776 29153364 -224103219 - L1ME2 LINE L1 -241 5992 5465 773 163 0 64 chr2 29153364 29153505 -224103078 - FLAM_C SINE Alu -1 132 1 2710 198 137 35 chr2 29153505 29154221 -224102362 - L1ME2 LINE L1 -768 5465 4493 1097 172 0 0 chr2 29154222 29154391 -224102192 - AluSg/x SINE Alu -10 302 134 2124 133 0 0 chr2 29154391 29154691 -224101892 - AluSq SINE Alu -5 308 9 61 27 0 0 chr2 29154708 29154783 -224101800 + AT_rich Low_complexity Low_complexity 1 75 0 464 182 30 68 chr2 29154783 29154915 -224101668 - L1ME2 LINE L1 -1778 4437 4311 1948 127 3 21 chr2 29154918 29155209 -224101374 - AluSx SINE Alu -10 302 17 766 153 0 0 chr2 29155209 29155320 -224101263 - AluJb SINE Alu -200 112 2 2174 227 124 39 chr2 29155324 29156155 -224100428 - L1ME2 LINE L1 -1906 4309 3408 * 2901 240 72 27 chr2 29156145 29157027 -224099556 - L1ME2 LINE L1 -3054 3161 2320 2371 96 0 10 chr2 29157027 29157339 -224099244 - AluSg SINE Alu -1 309 1 2462 103 0 0 chr2 29157339 29157650 -224098933 - AluSx SINE Alu -1 311 1 2901 240 72 27 chr2 29157650 29158111 -224098472 - L1ME2 LINE L1 -3894 2321 1810 310 262 35 19 chr2 29158368 29158493 -224098090 - MIR SINE MIR -62 146 43 611 250 67 12 chr2 29159108 29159272 -224097311 + MIR SINE MIR 20 192 -70 1408 233 51 28 chr2 29159273 29159668 -224096915 - MLT1E3 LTR MaLR 0 624 221 433 186 280 8 chr2 29159715 29159833 -224096750 - MLT1E3 LTR MaLR -503 151 2 2302 108 0 0 chr2 29160945 29161250 -224095333 + AluSx SINE Alu 1 305 -7 2573 63 0 0 chr2 29161323 29161626 -224094957 + AluY SINE Alu 1 303 -8 391 320 16 0 chr2 29161900 29162022 -224094561 + MIR SINE MIR 16 139 -69 227 174 22 22 chr2 29162827 29162873 -224093710 - MIR3 SINE MIR -9 199 154 603 329 11 15 chr2 29164248 29164510 -224092073 - MIR SINE MIR 0 262 3 286 320 213 0 chr2 29164694 29164816 -224091767 - L2 LINE L2 0 3272 3125 1892 133 59 14 chr2 29214871 29215157 -224041426 - AluJb SINE Alu -13 299 1 2359 99 0 16 chr2 29216161 29216509 -224040074 + AluSq SINE Alu 1 313 0 180 321 54 54 chr2 29216587 29216699 -224039884 + L2 LINE L2 3192 3303 -10 356 363 18 23 chr2 29217391 29217562 -224039021 - L1 LINE L1 -2316 3830 3661 242 313 133 5 chr2 29217679 29217874 -224038709 - L2 LINE L2 -2411 903 684 2322 117 3 0 chr2 29218003 29218330 -224038253 - AluSx SINE Alu 0 328 1 245 169 113 28 chr2 29218599 29218670 -224037913 + MIR SINE MIR 184 260 -2 286 276 112 17 chr2 29219035 29219151 -224037432 + MIR SINE MIR 24 150 -58 581 283 130 24 chr2 29219649 29219987 -224036596 + LTR16A LTR ERVL 1 362 -88 833 126 0 44 chr2 29220205 29220340 -224036243 - FLAM_C SINE Alu -14 129 1 434 248 48 67 chr2 29220379 29220589 -224035994 - MLT1K LTR MaLR -6 582 377 239 50 0 25 chr2 29220986 29221026 -224035557 - L1MB5 LINE L1 -9 6165 6127 742 141 0 8 chr2 29221040 29221161 -224035422 + AluJb SINE Alu 14 133 -179 1370 174 16 4 chr2 29221167 29221420 -224035163 - L1MB5 LINE L1 -33 6141 5886 1865 153 3 17 chr2 29221564 29221858 -224034725 - AluJb SINE Alu -4 308 19 381 295 71 86 chr2 29222508 29222718 -224033865 - MIR SINE MIR -37 225 19 214 339 26 0 chr2 29222731 29222846 -224033737 - L2 LINE L2 -233 3039 2922 4158 227 41 18 chr2 29223590 29224679 -224031904 - L1MC4 LINE L1 -141 7901 6788 6865 51 0 1 chr2 29224695 29225565 -224031018 - L1PA5 LINE L1 -8 6146 5278 320 176 40 14 chr2 29225559 29225633 -224030950 - L1MC4a LINE L1 -1085 6723 6648 * 479 188 0 0 chr2 29225873 29225958 -224030625 - AluJo SINE Alu -111 201 117 277 280 97 17 chr2 29226575 29226750 -224029833 - MIR SINE MIR -54 208 20 379 283 42 17 chr2 29226859 29226979 -224029604 + MIR SINE MIR 23 145 -63 2569 176 81 31 chr2 29228071 29228857 -224027726 - L1ME2 LINE L1 -168 5996 5170 315 167 32 32 chr2 29228859 29228921 -224027662 + Alu SINE Alu 1 48 -255 255 284 181 13 chr2 29229925 29230080 -224026503 - MIR SINE MIR -39 223 43 622 160 10 0 chr2 29230192 29230292 -224026291 - AluSp/q SINE Alu -18 295 195 292 219 94 10 chr2 29230843 29230939 -224025644 + L2 LINE L2 3168 3271 -1 295 218 42 99 chr2 29231076 29231218 -224025365 - L2 LINE L2 -452 2862 2729 248 293 83 68 chr2 29231473 29231678 -224024905 - L2 LINE L2 -362 2952 2745 682 185 0 13 chr2 29232603 29232760 -224023823 + CT-rich Low_complexity Low_complexity 2 156 0 248 196 18 0 chr2 29232921 29232977 -224023606 + (TAAA)n Simple_repeat Simple_repeat 1 57 0 281 202 112 34 chr2 29234164 29234253 -224022330 + L2 LINE L2 3217 3312 -1 1471 187 79 0 chr2 29234285 29234552 -224022031 + AluJo SINE Alu 1 288 -24 21 0 0 0 chr2 29234554 29234575 -224022008 + AT_rich Low_complexity Low_complexity 1 21 0 343 215 93 19 chr2 29235623 29235730 -224020853 + MIR SINE MIR 69 183 -79 22 0 0 0 chr2 29237435 29237457 -224019126 + AT_rich Low_complexity Low_complexity 1 22 0 2495 103 0 0 chr2 29237550 29237861 -224018722 + AluSx SINE Alu 1 311 -1 997 154 43 0 chr2 29237937 29238125 -224018458 - L1MB2 LINE L1 -1 6170 5975 225 65 0 0 chr2 29238144 29238175 -224018408 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1217 116 0 45 chr2 29238285 29238483 -224018100 + AluSc SINE Alu 115 303 -6 372 119 45 15 chr2 29238581 29238648 -224017935 - LTR42 LTR ERVL -65 430 362 * 1556 146 4 8 chr2 29238641 29238895 -224017688 - LTR42 LTR ERVL -242 253 1 2248 133 33 25 chr2 29238937 29239298 -224017285 - THE1B LTR MaLR 0 364 1 1806 170 12 3 chr2 29239455 29239785 -224016798 - L1MB3 LINE L1 -8 6175 5843 1719 169 6 48 chr2 29239785 29239943 -224016640 + AluJb SINE Alu 2 142 -170 1490 146 120 81 chr2 29239943 29240375 -224016208 - LTR7 LTR ERV1 0 450 2 1719 169 6 48 chr2 29240375 29240529 -224016054 + AluJb SINE Alu 142 301 -11 3401 193 13 7 chr2 29240529 29241715 -224014868 - L1MB3 LINE L1 -326 5857 4667 634 144 10 0 chr2 29241738 29241835 -224014748 + AluSg/x SINE Alu 78 175 -135 1813 286 85 11 chr2 29241935 29242585 -224013998 + L2 LINE L2 1665 2362 -952 3210 249 56 47 chr2 29242590 29243152 -224013431 + L1ME LINE L1 6 561 -5519 1420 166 68 64 chr2 29243152 29243448 -224013135 + AluJo SINE Alu 1 297 -15 3210 249 56 47 chr2 29243448 29244497 -224012086 + L1ME LINE L1 561 1640 -4440 493 223 108 135 chr2 29244502 29244798 -224011785 + L2 LINE L2 2353 2640 -674 207 0 0 0 chr2 29244800 29244823 -224011760 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 486 151 269 0 chr2 29244823 29244916 -224011667 - FLAM_C SINE Alu -24 119 2 921 281 76 14 chr2 29244917 29245385 -224011198 + L2 LINE L2 2632 3143 -170 636 141 29 129 chr2 29245425 29245595 -224010988 - FAM SINE Alu -13 172 20 2095 115 7 3 chr2 29245601 29245887 -224010696 - AluSx SINE Alu -25 287 1 238 169 145 24 chr2 29245918 29246001 -224010582 + LTR56 LTR ERV1 1 93 -352 803 142 83 100 chr2 29246417 29246657 -224009926 + LTR56 LTR ERV1 85 320 -125 556 214 0 15 chr2 29246783 29246914 -224009669 + L1MC4 LINE L1 7912 8040 -2 231 339 31 16 chr2 29247067 29247194 -224009389 + L2 LINE L2 1317 1445 -1869 219 238 0 0 chr2 29248260 29248302 -224008281 + MIR SINE MIR 109 150 -112 369 301 90 15 chr2 29248432 29248565 -224008018 - MIR SINE MIR -47 215 73 345 197 28 0 chr2 29249104 29249175 -224007408 - MIR SINE MIR -101 161 89 276 236 182 18 chr2 29249494 29249604 -224006979 + MIR3 SINE MIR 65 192 -16 210 324 29 9 chr2 29249736 29249841 -224006742 + MIR SINE MIR 35 141 -67 1077 174 5 20 chr2 29250273 29250469 -224006114 + AluSp SINE Alu 117 309 -4 732 233 36 26 chr2 29250736 29250929 -224005654 - MER89-int LTR ERV1 -6148 653 459 2237 103 10 3 chr2 29251060 29251350 -224005233 + AluSq SINE Alu 1 292 -21 186 43 0 0 chr2 29251357 29251380 -224005203 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1840 168 13 3 chr2 29251528 29251837 -224004746 + AluJb SINE Alu 1 312 0 273 278 33 61 chr2 29252006 29252186 -224004397 - MER89 LTR ERV1 -20 539 365 906 281 192 39 chr2 29252727 29252853 -224003730 - L2 LINE L2 0 3272 3167 220 0 0 79 chr2 29252853 29252891 -224003692 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2054 117 7 0 chr2 29252901 29253174 -224003409 - AluJo SINE Alu -36 276 2 906 281 192 39 chr2 29253174 29254279 -224002304 - L2 LINE L2 -112 3160 1842 204 333 73 10 chr2 29254672 29254768 -224001815 + MIR SINE MIR 16 117 -145 1138 139 0 0 chr2 29254939 29255104 -224001479 + AluJb SINE Alu 5 169 -143 221 284 0 40 chr2 29255586 29255660 -224000923 + MIR3 SINE MIR 104 174 -34 232 319 0 11 chr2 29256188 29256279 -224000304 + MIR SINE MIR 168 257 -5 195 309 79 24 chr2 29256715 29256841 -223999742 - MIR3 SINE MIR -67 141 9 958 212 6 17 chr2 29257098 29257277 -223999306 + MER5B DNA MER1_type 1 177 -1 530 274 16 0 chr2 29257506 29257630 -223998953 - L2 LINE L2 0 3313 3188 202 293 0 37 chr2 29258015 29258097 -223998486 - L2 LINE L2 0 3272 3194 959 214 0 0 chr2 29258525 29258698 -223997885 + FAM SINE Alu 1 173 -12 423 239 74 25 chr2 29258968 29259131 -223997452 + MER112 DNA MER1_type 79 249 -11 1824 102 40 7 chr2 29259241 29259540 -223997043 - AluY SINE Alu 0 308 1 777 147 0 39 chr2 29259870 29259999 -223996584 + FLAM_C SINE Alu 2 125 -18 1691 154 42 11 chr2 29260870 29261156 -223995427 - AluJo SINE Alu -17 295 1 400 295 28 13 chr2 29261782 29261953 -223994630 - MIR SINE MIR -59 203 35 2263 80 0 26 chr2 29262646 29262958 -223993625 - AluSx SINE Alu -8 304 1 638 180 0 41 chr2 29263032 29263154 -223993429 + MER63 DNA MER1_type 40 782 -54 474 275 94 0 chr2 29263210 29263359 -223993224 + MIR SINE MIR 100 262 0 343 294 25 34 chr2 29264054 29264173 -223992410 - MIR SINE MIR -70 192 75 210 303 0 15 chr2 29264187 29264253 -223992330 + CT-rich Low_complexity Low_complexity 2 66 0 29 0 0 0 chr2 29264613 29264642 -223991941 + AT_rich Low_complexity Low_complexity 1 29 0 207 255 0 0 chr2 29265800 29265847 -223990736 + (CACG)n Simple_repeat Simple_repeat 1 47 0 1525 195 3 10 chr2 29267515 29267807 -223988776 + AluJo SINE Alu 1 290 -22 357 271 19 77 chr2 29269215 29269370 -223987213 - MIR3 SINE MIR -21 187 42 352 264 118 0 chr2 29269914 29270024 -223986559 + MIR3 SINE MIR 38 160 -48 296 310 21 56 chr2 29270034 29270176 -223986407 + MER5B DNA MER1_type 22 158 -20 504 160 0 0 chr2 29270508 29270583 -223986000 - AluS SINE Alu -235 77 3 1038 241 34 15 chr2 29270590 29270852 -223985731 - L1M4 LINE L1 -1159 4987 4721 1898 157 7 0 chr2 29270887 29271193 -223985390 - AluJo SINE Alu -4 308 1 211 68 0 45 chr2 29272688 29272732 -223983851 + (CA)n Simple_repeat Simple_repeat 2 43 0 447 19 0 0 chr2 29273331 29273383 -223983200 + (TG)n Simple_repeat Simple_repeat 2 53 0 1834 146 0 0 chr2 29273529 29273809 -223982774 + AluJo SINE Alu 5 284 -28 366 298 43 22 chr2 29273882 29274016 -223982567 - MIR SINE MIR -62 146 30 317 298 10 19 chr2 29274595 29274699 -223981884 - MIR SINE MIR -109 153 51 1897 180 24 18 chr2 29274857 29275240 -223981343 + MLT1B LTR MaLR 6 390 0 204 240 20 0 chr2 29275268 29275318 -223981265 + L2 LINE L2 3262 3312 -1 217 280 43 21 chr2 29276157 29276250 -223980333 + MIR SINE MIR 39 133 -129 251 246 39 101 chr2 29276565 29276744 -223979839 + L2 LINE L2 2887 3054 -218 223 146 49 0 chr2 29276761 29276802 -223979781 + (TCTG)n Simple_repeat Simple_repeat 3 45 0 240 313 148 0 chr2 29276868 29276983 -223979600 + L2 LINE L2 3137 3268 -4 279 241 81 23 chr2 29277391 29277478 -223979105 + L2 LINE L2 3159 3250 -22 499 196 47 0 chr2 29277481 29277588 -223978995 + MER94 DNA DNA 2 113 -21 267 103 0 0 chr2 29277599 29277638 -223978945 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 477 317 80 15 chr2 29277872 29278071 -223978512 - MIR SINE MIR -33 229 18 239 337 20 0 chr2 29279041 29279142 -223977441 + MER94 DNA DNA 6 108 -26 255 170 0 0 chr2 29280168 29280215 -223976368 + (TG)n Simple_repeat Simple_repeat 1 47 0 777 231 20 45 chr2 29280759 29280958 -223975625 + MIR SINE MIR 19 212 -50 446 262 41 0 chr2 29281078 29281200 -223975383 - L2 LINE L2 -6 3307 3181 4301 178 71 6 chr2 29281332 29282108 -223974475 + LTR1B LTR ERV1 1 826 0 365 238 0 12 chr2 29282201 29282281 -223974302 - MIR SINE MIR -118 144 66 544 280 192 12 chr2 29282284 29282534 -223974049 - L2 LINE L2 -4 3309 3015 2342 169 42 6 chr2 29282750 29283250 -223973333 - L1MC1 LINE L1 0 6333 5772 1971 152 19 36 chr2 29283250 29283611 -223972972 + THE1A LTR MaLR 1 355 0 2342 169 42 6 chr2 29283611 29283660 -223972923 - L1MC1 LINE L1 -561 5772 5726 1527 171 42 9 chr2 29284255 29284555 -223972028 + L1MB3 LINE L1 5749 6037 -146 2385 89 27 0 chr2 29284555 29284878 -223971705 + L1PA13 LINE L1 5819 6163 0 735 161 42 7 chr2 29284878 29285006 -223971577 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 29285012 29285125 -223971458 - LTR23 LTR ERV1 -23 414 295 416 65 0 0 chr2 29285126 29285188 -223971395 - Alu SINE Alu -2 308 247 1268 84 39 0 chr2 29285188 29285367 -223971216 + L1PA13 LINE L1 5978 6163 0 735 161 42 7 chr2 29285367 29285495 -223971088 + L1MB3 LINE L1 6036 6183 0 406 257 62 0 chr2 29285501 29285614 -223970969 - LTR23 LTR ERV1 -23 414 295 700 93 0 0 chr2 29285615 29285712 -223970871 - AluSg/x SINE Alu -2 307 211 316 290 30 0 chr2 29285840 29285940 -223970643 - MIR3 SINE MIR -45 163 61 543 250 181 0 chr2 29286872 29287032 -223969551 - MIR SINE MIR -25 237 49 323 298 19 0 chr2 29287900 29288004 -223968579 + L2 LINE L2 2958 3063 -209 1907 203 78 50 chr2 29288400 29288884 -223967699 + MLT1D LTR MaLR 8 505 0 443 287 144 33 chr2 29288923 29288981 -223967602 - MIR SINE MIR -2 260 210 1888 188 28 38 chr2 29288981 29289375 -223967208 - MLT1B LTR MaLR 0 390 1 443 287 144 33 chr2 29289375 29289497 -223967086 - MIR SINE MIR -52 210 60 272 153 3 43 chr2 29289497 29289566 -223967017 - L1P LINE L1 -792 5354 5284 477 50 0 0 chr2 29290421 29290481 -223966102 + (CA)n Simple_repeat Simple_repeat 2 61 0 467 243 0 28 chr2 29290705 29290812 -223965771 - L3 LINE CR1 -59 1518 1415 311 254 136 27 chr2 29291267 29291377 -223965206 + MIR SINE MIR 70 191 -71 207 143 0 0 chr2 29291956 29291991 -223964592 - MIR3 SINE MIR -46 162 128 183 129 0 0 chr2 29294535 29294566 -223962017 + (CAGGG)n Simple_repeat Simple_repeat 4 34 0 570 333 35 53 chr2 29296325 29296398 -223960185 - L3 LINE CR1 -20 1557 1484 1497 218 128 37 chr2 29296398 29296857 -223959726 - MLT1D LTR MaLR -4 501 1 570 333 35 53 chr2 29296857 29297065 -223959518 - L3 LINE CR1 -93 1484 1281 473 186 103 0 chr2 29297267 29297364 -223959219 - MER103 DNA DNA -49 117 11 423 0 0 0 chr2 29297876 29297923 -223958660 + (CA)n Simple_repeat Simple_repeat 2 48 0 218 276 293 9 chr2 29298339 29298455 -223958128 - MIR SINE MIR -14 248 100 590 294 0 12 chr2 29299045 29299215 -223957368 + MIR3 SINE MIR 36 203 -5 181 262 0 0 chr2 29299428 29299470 -223957113 - MIR SINE MIR -65 197 156 492 324 14 12 chr2 29299627 29299799 -223956784 - MIR SINE MIR -69 139 16 265 231 78 24 chr2 29299832 29299947 -223956636 - MIR SINE MIR -72 136 18 232 250 0 0 chr2 29299985 29300037 -223956546 + CT-rich Low_complexity Low_complexity 1 52 0 663 54 0 0 chr2 29300747 29300839 -223955744 + (TG)n Simple_repeat Simple_repeat 2 93 0 693 247 68 54 chr2 29300862 29301091 -223955492 - L1ME3A LINE L1 -10 6160 5925 2172 82 7 7 chr2 29301091 29301383 -223955200 + AluSg SINE Alu 1 292 -18 693 247 68 54 chr2 29301383 29301449 -223955134 - L1ME3A LINE L1 -245 5925 5861 304 300 9 27 chr2 29301455 29301565 -223955018 - L1MC4 LINE L1 -1330 6712 6605 333 286 10 31 chr2 29301613 29301809 -223954774 - L1MC5 LINE L1 -178 7783 7592 333 340 20 50 chr2 29302046 29302246 -223954337 - L3 LINE CR1 -171 1406 1213 2432 81 0 0 chr2 29302669 29302978 -223953605 + AluSg SINE Alu 1 309 -1 738 300 27 9 chr2 29303022 29303245 -223953338 - MLT1K LTR MaLR -11 577 351 713 239 58 66 chr2 29303276 29303519 -223953064 - MLT1K LTR MaLR -305 283 43 754 227 52 35 chr2 29303547 29303776 -223952807 + MIR SINE MIR 29 261 -1 261 313 27 53 chr2 29304209 29304359 -223952224 - MIR3 SINE MIR -47 161 16 210 194 56 42 chr2 29305601 29305673 -223950910 + CT-rich Low_complexity Low_complexity 5 77 0 299 314 141 6 chr2 29305911 29306067 -223950516 + MIR SINE MIR 72 248 -14 27 62 0 0 chr2 29306537 29306585 -223949998 + GC_rich Low_complexity Low_complexity 1 48 0 247 219 164 0 chr2 29307416 29307489 -223949094 - MIR SINE MIR -55 153 69 186 319 55 22 chr2 29307500 29307591 -223948992 - MIR SINE MIR -59 203 110 507 254 98 23 chr2 29307679 29307852 -223948731 - MIR3 SINE MIR -22 186 1 21 0 0 0 chr2 29307958 29307979 -223948604 + AT_rich Low_complexity Low_complexity 1 21 0 27 92 0 0 chr2 29308194 29308270 -223948313 + GC_rich Low_complexity Low_complexity 1 76 0 231 172 17 17 chr2 29308928 29308986 -223947597 + CT-rich Low_complexity Low_complexity 2 59 0 195 100 0 0 chr2 29309119 29309149 -223947434 + (CGAG)n Simple_repeat Simple_repeat 1 30 0 261 83 0 0 chr2 29309164 29309200 -223947383 + (GA)n Simple_repeat Simple_repeat 2 37 0 441 0 0 0 chr2 29312597 29312646 -223943937 + (CA)n Simple_repeat Simple_repeat 2 50 0 342 24 0 0 chr2 29312987 29313029 -223943554 + L1PA6 LINE L1 6106 6147 -7 738 268 33 47 chr2 29313453 29313729 -223942854 - MARNA DNA Mariner -49 537 266 914 213 137 0 chr2 29315552 29315749 -223940834 + MER58A DNA MER1_type 1 224 0 183 80 0 0 chr2 29316923 29316948 -223939635 + (ATGGTG)n Simple_repeat Simple_repeat 6 30 0 585 276 5 43 chr2 29316966 29317151 -223939432 + MER5B DNA MER1_type 1 178 0 225 312 172 6 chr2 29317172 29317329 -223939254 - MIR SINE MIR -57 205 23 658 298 78 8 chr2 29318534 29318776 -223937807 + MIR SINE MIR 4 262 0 248 297 0 0 chr2 29320314 29320388 -223936195 + MIR SINE MIR 77 150 -112 282 304 108 57 chr2 29320956 29321150 -223935433 - MIR3 SINE MIR 0 208 5 2253 104 0 19 chr2 29321819 29322136 -223934447 - AluSx SINE Alu -1 311 1 593 271 6 57 chr2 29322193 29322370 -223934213 - MIR3 SINE MIR -32 176 9 225 331 58 61 chr2 29322960 29323271 -223933312 + L2 LINE L2 2963 3272 0 189 206 132 44 chr2 29323438 29323506 -223933077 - MIR3 SINE MIR -29 179 106 5666 82 113 95 chr2 29323506 29324981 -223931602 + pTR5 LTR ERV1 753 2438 0 1619 147 23 37 chr2 29324994 29325293 -223931290 + AluJo SINE Alu 1 295 -17 25 0 0 0 chr2 29325359 29325384 -223931199 + AT_rich Low_complexity Low_complexity 1 25 0 265 291 189 50 chr2 29325393 29325854 -223930729 + L2 LINE L2 1929 2453 -861 613 111 0 0 chr2 29325910 29326000 -223930583 - LTR12 LTR ERV1 0 714 625 364 206 76 92 chr2 29326000 29326131 -223930452 - LTR30 LTR ERV1 -71 723 544 718 173 129 7 chr2 29326252 29326391 -223930192 - LTR12 LTR ERV1 -549 165 10 215 236 85 38 chr2 29326391 29326497 -223930086 + L2 LINE L2 2551 2661 -653 247 329 0 24 chr2 29327227 29327312 -223929271 + L2 LINE L2 3187 3269 -3 252 305 76 34 chr2 29327505 29327623 -223928960 + L2 LINE L2 3191 3313 0 2262 101 0 0 chr2 29329320 29329627 -223926956 - AluSq SINE Alu -6 307 1 192 380 0 0 chr2 29330315 29330428 -223926155 + MIR3 SINE MIR 78 190 -18 2142 112 3 7 chr2 29330453 29330758 -223925825 + AluSx SINE Alu 1 304 -8 379 291 39 0 chr2 29330794 29330897 -223925686 - L2 LINE L2 -8 3305 3199 726 292 18 9 chr2 29331060 29331279 -223925304 + MIR SINE MIR 21 241 -21 232 118 0 0 chr2 29335279 29335313 -223921270 - L2 LINE L2 -29 3284 3251 25 0 0 0 chr2 29335942 29335967 -223920616 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 29336052 29336075 -223920508 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr2 29336537 29336558 -223920025 + (T)n Simple_repeat Simple_repeat 1 21 0 188 35 35 0 chr2 29336687 29336716 -223919867 + (TTG)n Simple_repeat Simple_repeat 2 31 0 1781 188 0 0 chr2 29337658 29337961 -223918622 - AluJb SINE Alu -9 303 1 396 305 14 31 chr2 29338014 29338190 -223918393 + MIR SINE MIR 20 198 -64 30 0 0 0 chr2 29338219 29338249 -223918334 + AT_rich Low_complexity Low_complexity 1 30 0 2186 119 0 0 chr2 29338288 29338598 -223917985 - AluSx SINE Alu -2 310 1 2237 101 0 16 chr2 29339823 29340141 -223916442 - AluSq SINE Alu 0 313 1 1368 149 16 29 chr2 29340686 29340928 -223915655 - L1MB5 LINE L1 -9 6165 5927 2119 129 3 0 chr2 29341146 29341457 -223915126 - AluSx SINE Alu 0 312 1 195 232 29 29 chr2 29341701 29341770 -223914813 - L2 LINE L2 -4 3309 3241 182 231 77 15 chr2 29341838 29341903 -223914680 - L2 LINE L2 -59 3254 3186 1881 156 0 7 chr2 29342029 29342336 -223914247 + AluJb SINE Alu 1 305 -7 293 282 29 19 chr2 29342512 29342615 -223913968 - L2 LINE L2 -2 3311 3208 425 334 168 20 chr2 29343211 29343807 -223912776 + L2 LINE L2 1328 2011 -1303 195 316 125 20 chr2 29343830 29343982 -223912601 + L2 LINE L2 2461 2628 -686 1780 169 3 0 chr2 29344370 29344671 -223911912 + AluJo SINE Alu 1 302 -10 1879 173 5 40 chr2 29344672 29345047 -223911536 + L1MC1 LINE L1 5526 5887 -446 1269 175 0 9 chr2 29345047 29345254 -223911329 + L1MC1 LINE L1 6118 6332 -1 1324 149 8 25 chr2 29345258 29345493 -223911090 + AluJb SINE Alu 77 307 -5 199 289 11 67 chr2 29345578 29345668 -223910915 - MIR3 SINE MIR -49 159 75 225 256 103 0 chr2 29345709 29345787 -223910796 + MIR SINE MIR 107 192 -70 620 247 86 6 chr2 29346238 29346400 -223910183 + MIR SINE MIR 23 197 -65 833 162 14 7 chr2 29346508 29346656 -223909927 - AluJo SINE Alu -163 149 1 23 0 0 0 chr2 29346663 29346686 -223909897 + AT_rich Low_complexity Low_complexity 1 23 0 204 239 0 0 chr2 29347508 29347554 -223909029 - L2 LINE L2 0 3272 3227 184 327 0 0 chr2 29347593 29347645 -223908938 - L2 LINE L2 0 3272 3221 565 283 151 4 chr2 29347933 29348191 -223908392 - L2 LINE L2 -22 3291 2996 2056 119 0 3 chr2 29348989 29349317 -223907266 - AluSx SINE Alu 0 312 4 255 103 0 0 chr2 29350402 29350441 -223906142 + (TCC)n Simple_repeat Simple_repeat 1 39 0 204 246 154 18 chr2 29350856 29350966 -223905617 + MIR3 SINE MIR 3 127 -81 760 222 153 24 chr2 29351647 29351703 -223904880 + MER46C DNA MER2_type 4 51 -287 2365 72 0 3 chr2 29351703 29352008 -223904575 - AluSg SINE Alu -6 304 1 760 222 153 24 chr2 29352008 29352239 -223904344 + MER46C DNA MER2_type 51 328 -10 503 270 176 18 chr2 29352246 29352468 -223904115 - MIR SINE MIR -2 260 4 288 200 53 13 chr2 29352468 29352540 -223904043 - MIR SINE MIR -73 135 61 180 323 195 22 chr2 29353086 29353312 -223903271 - L2 LINE L2 -3 3269 3005 1941 102 30 49 chr2 29353732 29354036 -223902547 - AluSx SINE Alu -14 298 1 2150 175 28 28 chr2 29354056 29354428 -223902155 + L1PA16 LINE L1 5767 6141 -25 2133 91 3 36 chr2 29354428 29354735 -223901848 - AluSx SINE Alu -15 297 1 2150 175 28 28 chr2 29354735 29354762 -223901821 + L1PA16 LINE L1 6140 6166 0 232 282 70 50 chr2 29354792 29354937 -223901646 + L1MC5 LINE L1 7676 7829 -132 2020 154 0 0 chr2 29354937 29355242 -223901341 + AluJo SINE Alu 1 305 -7 232 282 70 50 chr2 29355242 29355337 -223901246 + L1MC5 LINE L1 7829 7921 -40 331 328 61 32 chr2 29355523 29355770 -223900813 + L2 LINE L2 2414 2667 -647 189 364 56 19 chr2 29357426 29357588 -223898995 + L2 LINE L2 2851 3018 -254 432 253 95 32 chr2 29357681 29357839 -223898744 + MIR SINE MIR 9 176 -86 2164 104 7 0 chr2 29357860 29358159 -223898424 - AluY SINE Alu -10 301 1 2071 86 79 0 chr2 29358159 29358438 -223898145 - AluSq SINE Alu -8 305 5 264 356 37 21 chr2 29359054 29359245 -223897338 + MIR SINE MIR 35 228 -34 226 324 124 28 chr2 29361132 29361277 -223895306 - MIR3 SINE MIR -9 199 41 364 318 9 0 chr2 29361761 29361871 -223894712 + MIR3 SINE MIR 76 187 -21 1828 173 7 0 chr2 29362035 29362335 -223894248 + AluJo SINE Alu 1 302 -10 753 265 146 0 chr2 29362651 29362870 -223893713 + MIR SINE MIR 2 252 -10 285 29 0 0 chr2 29362871 29362905 -223893678 + (TTCA)n Simple_repeat Simple_repeat 2 35 0 441 326 83 38 chr2 29365014 29365327 -223891256 + MLT1K LTR MaLR 10 336 -252 1774 242 35 24 chr2 29365337 29365799 -223890784 + MLT1C LTR MaLR 1 467 0 2074 137 0 3 chr2 29417441 29417761 -223838822 + AluSx SINE Alu 1 319 0 2313 110 0 0 chr2 29418403 29418702 -223837881 + AluSx SINE Alu 1 299 -13 271 311 133 39 chr2 29418925 29419105 -223837478 + MIR SINE MIR 46 242 -20 195 294 88 15 chr2 29420249 29420317 -223836266 + MIR SINE MIR 46 118 -144 261 296 63 35 chr2 29422018 29422160 -223834423 + MIR SINE MIR 4 141 -67 250 346 68 6 chr2 29423222 29423384 -223833199 + L3b LINE CR1 1313 1484 -99 1903 166 3 10 chr2 29423474 29423782 -223832801 + AluJb SINE Alu 5 310 -2 757 213 13 0 chr2 29425177 29425327 -223831256 - MER5A DNA MER1_type -2 187 36 1578 72 0 10 chr2 29425958 29426153 -223830430 - AluSc SINE Alu -1 308 116 2257 115 0 10 chr2 29426724 29427029 -223829554 - AluSx SINE Alu -10 302 1 2141 118 0 41 chr2 29427079 29427393 -223829190 - AluSg SINE Alu -9 301 1 695 306 46 0 chr2 29428180 29428396 -223828187 + MIR SINE MIR 37 262 0 183 289 0 0 chr2 29428416 29428461 -223828122 - L2 LINE L2 0 3272 3228 * 229 164 18 91 chr2 29428436 29428491 -223828092 + L2 LINE L2 3171 3221 -92 208 216 0 0 chr2 29428517 29428554 -223828029 + (TGGA)n Simple_repeat Simple_repeat 1 37 0 563 227 18 9 chr2 29428998 29429108 -223827475 - L2 LINE L2 0 3313 3203 366 322 116 22 chr2 29429111 29429378 -223827205 - L2 LINE L2 -577 2737 2446 198 225 0 0 chr2 29429737 29429777 -223826806 - MIR SINE MIR -10 252 213 197 156 31 0 chr2 29430325 29430357 -223826226 - L2 LINE L2 -94 3219 3187 308 218 26 64 chr2 29430795 29430873 -223825710 + L1MC4 LINE L1 6628 6702 -1340 1482 163 71 39 chr2 29430889 29431172 -223825411 - AluJo SINE Alu -20 292 1 2355 107 0 0 chr2 29431695 29431995 -223824588 - AluSx SINE Alu -12 300 1 238 161 0 71 chr2 29432209 29432265 -223824318 + L2 LINE L2 3262 3313 0 1883 150 27 0 chr2 29432412 29432706 -223823877 - AluJb SINE Alu 0 312 11 250 186 0 0 chr2 29434602 29434645 -223821938 - 5S rRNA rRNA -78 43 1 294 87 0 0 chr2 29434697 29434743 -223821840 + (TG)n Simple_repeat Simple_repeat 2 47 0 231 36 0 0 chr2 29435248 29435276 -223821307 + (TG)n Simple_repeat Simple_repeat 2 29 0 891 152 0 0 chr2 29435446 29435578 -223821005 - FLAM_C SINE Alu -1 132 1 574 138 21 0 chr2 29435583 29435677 -223820906 - FRAM SINE Alu -14 162 67 1196 141 10 26 chr2 29435750 29435942 -223820641 + MER5A DNA MER1_type 1 189 0 2207 98 0 0 chr2 29436294 29436579 -223820004 - AluSx SINE Alu -1 311 27 910 123 58 14 chr2 29437072 29437210 -223819373 + AluJb SINE Alu 156 299 -13 918 174 0 4 chr2 29437210 29437383 -223819200 + L1MB5 LINE L1 5823 5982 -192 183 238 124 97 chr2 29437513 29437811 -223818772 + L2 LINE L2 2964 3269 -44 3545 160 6 21 chr2 29437881 29438162 -223818421 + L1MB5 LINE L1 5551 5835 -339 1914 144 13 10 chr2 29438162 29438460 -223818123 + AluJb SINE Alu 1 299 -13 3545 160 6 21 chr2 29438460 29438810 -223817773 + L1MB5 LINE L1 5835 6173 -1 2369 97 0 0 chr2 29438815 29439113 -223817470 + AluSc SINE Alu 1 298 -11 209 222 28 130 chr2 29439894 29440002 -223816581 - MIR SINE MIR -73 135 39 376 287 44 55 chr2 29440457 29440511 -223816072 - MIR SINE MIR -78 184 131 1582 194 14 21 chr2 29440511 29440799 -223815784 + AluJo SINE Alu 1 286 -26 376 287 44 55 chr2 29440799 29440925 -223815658 - MIR SINE MIR -131 131 6 453 251 171 24 chr2 29442225 29442436 -223814147 + MIR SINE MIR 21 262 0 440 288 7 46 chr2 29442421 29442574 -223814009 - MIR SINE MIR -100 162 16 * 2375 72 0 7 chr2 29444012 29444304 -223812279 - AluSc SINE Alu 0 309 20 231 266 31 16 chr2 29445330 29445394 -223811189 - L2 LINE L2 -270 3002 2938 440 389 57 9 chr2 29445408 29445637 -223810946 - L3 LINE CR1 -58 1519 1280 6968 202 64 26 chr2 29446006 29446235 -223810348 + L1MB8 LINE L1 3209 3428 -2750 2609 67 0 3 chr2 29446235 29446547 -223810036 + AluY SINE Alu 1 311 0 6968 202 64 26 chr2 29446547 29447055 -223809528 + L1MB8 LINE L1 3428 3915 -2263 2041 143 7 0 chr2 29447055 29447356 -223809227 + AluSx SINE Alu 1 303 -9 6968 202 64 26 chr2 29447356 29449479 -223807104 + L1MB8 LINE L1 3915 6173 -5 5750 71 13 22 chr2 29450748 29450932 -223805651 - L1PB2 LINE L1 -2 6149 5965 2161 121 0 44 chr2 29450932 29451247 -223805336 - AluSx SINE Alu -11 301 1 5750 71 13 22 chr2 29451247 29451923 -223804660 - L1PB2 LINE L1 -186 5965 5297 1950 109 69 0 chr2 29452124 29452400 -223804183 - AluY SINE Alu -15 296 2 221 323 0 0 chr2 29452733 29452795 -223803788 - MIR SINE MIR -110 152 91 2262 114 0 0 chr2 29452998 29453288 -223803295 + AluSx SINE Alu 1 290 -22 449 153 0 0 chr2 29453218 29453290 -223803293 + AluS SINE Alu 221 292 -20 322 311 8 25 chr2 29453336 29453458 -223803125 - MIR3 SINE MIR -43 165 46 806 278 24 0 chr2 29453570 29453782 -223802801 - MIR SINE MIR -13 249 33 234 164 0 82 chr2 29453859 29453920 -223802663 + LTR65 LTR ERV1 259 314 -355 2195 134 3 0 chr2 29454110 29454409 -223802174 + AluSg SINE Alu 1 300 -10 263 284 58 103 chr2 29454857 29455100 -223801483 - L2 LINE L2 0 3272 3041 348 158 0 0 chr2 29455115 29455172 -223801411 + MER66B LTR ERV1 292 348 -138 236 226 118 11 chr2 29456812 29456905 -223799678 - L2 LINE L2 -38 3234 3132 2314 114 3 0 chr2 29456982 29457281 -223799302 + AluSx SINE Alu 1 300 -12 462 18 0 0 chr2 29458032 29458087 -223798496 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 2164 121 27 3 chr2 29458235 29458533 -223798050 + AluJb SINE Alu 1 305 -7 2097 146 78 43 chr2 29459681 29459739 -223796844 + Tigger4(Zombi) DNA MER2_type 1 55 -2676 2292 102 7 3 chr2 29459739 29460034 -223796549 - AluSx SINE Alu -16 296 1 2097 146 78 43 chr2 29460034 29460372 -223796211 + Tigger4(Zombi) DNA MER2_type 55 411 -2320 461 165 12 0 chr2 29460384 29460469 -223796114 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 794 272 53 4 chr2 29461384 29461630 -223794953 + MIR SINE MIR 2 259 -3 2372 98 0 3 chr2 29461819 29462126 -223794457 - AluSx SINE Alu -6 306 1 2067 151 0 3 chr2 29463286 29463598 -223792985 - AluJb SINE Alu -1 311 1 2061 133 27 0 chr2 29463884 29464177 -223792406 + AluJb SINE Alu 2 302 -10 469 271 180 59 chr2 29464219 29464474 -223792109 - LTR67 LTR ERVL -263 294 9 2419 61 0 14 chr2 29465433 29465727 -223790856 + AluSg SINE Alu 1 290 -20 268 271 209 31 chr2 29468060 29468189 -223788394 + MER5B DNA MER1_type 2 153 -25 204 100 0 0 chr2 29468202 29468232 -223788351 + L3 LINE CR1 1543 1572 -5 200 198 35 23 chr2 29468909 29468995 -223787588 + CT-rich Low_complexity Low_complexity 3 89 0 445 229 41 41 chr2 29472029 29472151 -223784432 - MER103 DNA DNA -22 144 23 2529 66 0 3 chr2 29473531 29473833 -223782750 + AluY SINE Alu 1 301 -10 369 268 105 13 chr2 29474286 29474439 -223782144 + MIR SINE MIR 86 252 -10 2012 137 11 0 chr2 29476306 29476591 -223779992 - AluSx SINE Alu -24 288 1 1876 171 3 7 chr2 29476591 29476884 -223779699 - AluJb SINE Alu -17 295 4 564 323 7 48 chr2 29477507 29477776 -223778807 + L3 LINE CR1 1319 1576 -1 311 65 22 0 chr2 29478132 29478178 -223778405 + (CA)n Simple_repeat Simple_repeat 1 47 0 209 373 49 0 chr2 29479262 29479364 -223777219 + MER91C DNA MER1_type 34 140 0 205 231 0 0 chr2 29480116 29480155 -223776428 - MIR SINE MIR -21 241 203 299 287 195 20 chr2 29481623 29481818 -223774765 - MIR SINE MIR -2 260 32 360 322 46 15 chr2 29482862 29483110 -223773473 - MIR SINE MIR -3 259 1 1768 181 3 19 chr2 29485583 29485897 -223770686 - AluJo SINE Alu -3 309 1 305 260 24 55 chr2 29486629 29486756 -223769827 - L3 LINE CR1 -1 1576 1454 1143 92 0 0 chr2 29486775 29486939 -223769644 - L1PA8 LINE L1 -2 6170 6007 811 132 0 29 chr2 29486992 29487128 -223769455 - FLAM_C SINE Alu -1 132 1 197 300 180 34 chr2 29487234 29487467 -223769116 - L3 LINE CR1 -374 1203 937 280 329 45 19 chr2 29487485 29487640 -223768943 - L3 LINE CR1 -146 1431 1273 2341 91 0 19 chr2 29488536 29488845 -223767738 + AluY SINE Alu 1 303 -8 205 305 9 48 chr2 29489081 29489186 -223767397 + MIR SINE MIR 53 153 -55 1799 153 16 45 chr2 29489280 29489593 -223766990 - AluSx SINE Alu -6 306 3 1803 184 0 17 chr2 29489598 29489897 -223766686 - AluJo SINE Alu -13 299 6 831 319 66 7 chr2 29491512 29492107 -223764476 - L2 LINE L2 -8 3305 2664 227 305 85 34 chr2 29492368 29492486 -223764097 - L2 LINE L2 -1 3312 3189 2644 135 23 15 chr2 29492579 29493053 -223763530 + L1MA5 LINE L1 5821 6298 -2 408 159 0 0 chr2 29493086 29493155 -223763428 + MER5A DNA MER1_type 41 109 -80 26 64 0 0 chr2 29493911 29493958 -223762625 + AT_rich Low_complexity Low_complexity 1 47 0 1308 98 5 10 chr2 29495715 29495919 -223760664 - L1PA13 LINE L1 -1 6162 5960 209 301 72 0 chr2 29497856 29497939 -223758644 - MIR SINE MIR -168 94 6 210 217 22 0 chr2 29498522 29498568 -223758015 + (TTA)n Simple_repeat Simple_repeat 3 49 0 699 276 65 17 chr2 29498897 29499129 -223757454 + MIR SINE MIR 6 248 -14 191 291 44 76 chr2 29499209 29499284 -223757299 - L2 LINE L2 -1 3312 3236 2122 135 10 6 chr2 29499284 29499595 -223756988 + AluSq SINE Alu 1 312 -1 191 291 44 76 chr2 29499595 29499677 -223756906 - L2 LINE L2 -77 3236 3160 546 255 14 7 chr2 29499788 29499933 -223756650 - MIR3 SINE MIR -22 186 41 540 208 39 32 chr2 29500425 29500441 -223756142 - L1MA10 LINE L1 0 6334 6319 1205 238 34 47 chr2 29500441 29500497 -223756086 - L1ME1 LINE L1 -5 6161 6106 2024 120 21 7 chr2 29500497 29500780 -223755803 + AluJb SINE Alu 1 287 -25 1205 238 34 47 chr2 29500780 29501111 -223755472 - L1ME1 LINE L1 -60 6106 5783 333 329 43 31 chr2 29501239 29501400 -223755183 + L3b LINE CR1 1110 1272 -311 2504 87 0 0 chr2 29502663 29502973 -223753610 - AluSx SINE Alu -2 310 1 196 250 0 0 chr2 29504655 29504695 -223751888 - L2 LINE L2 -4 3268 3229 267 256 85 0 chr2 29505529 29505606 -223750977 + MIR SINE MIR 61 146 -62 400 147 11 105 chr2 29505634 29505729 -223750854 + MIR3 SINE MIR 97 182 -26 287 277 128 21 chr2 29506039 29506133 -223750450 + MIR3 SINE MIR 96 199 -9 517 239 26 8 chr2 29506219 29506336 -223750247 + MIR SINE MIR 64 182 -80 1001 191 6 0 chr2 29507685 29507858 -223748725 + FRAM SINE Alu 1 174 -2 1799 104 123 4 chr2 29509185 29509453 -223747130 + AluSg SINE Alu 1 300 0 265 278 194 37 chr2 29509982 29510173 -223746410 + MIR SINE MIR 31 251 -11 183 207 121 0 chr2 29511096 29511154 -223745429 + L3 LINE CR1 591 655 -922 1963 146 3 13 chr2 29511302 29511610 -223744973 + AluJb SINE Alu 1 305 -7 382 302 141 0 chr2 29512001 29512150 -223744433 - MIR3 SINE MIR -9 199 30 242 244 0 0 chr2 29512616 29512657 -223743926 + MER5B DNA MER1_type 3 43 -135 526 97 43 0 chr2 29512662 29512755 -223743828 + (TATG)n Simple_repeat Simple_repeat 2 98 0 2027 133 0 18 chr2 29512755 29513040 -223743543 - AluSx SINE Alu -32 280 1 1595 237 49 56 chr2 29513069 29513681 -223742902 + L1ME3A LINE L1 5558 6165 -5 2285 114 3 10 chr2 29513688 29513995 -223742588 + AluSq SINE Alu 1 305 -8 545 199 37 52 chr2 29514000 29514136 -223742447 - MER5B DNA MER1_type -44 134 1 249 296 105 42 chr2 29514136 29514565 -223742018 + L2 LINE L2 2660 3110 -162 1360 292 221 28 chr2 29514702 29515548 -223741035 - L2 LINE L2 0 3313 2632 1547 105 0 24 chr2 29515548 29515758 -223740825 + AluSg/x SINE Alu 92 296 -16 1360 292 221 28 chr2 29515758 29516304 -223740279 - L2 LINE L2 -681 2632 1628 2213 97 7 0 chr2 29518002 29518291 -223738292 + AluSx SINE Alu 1 291 -21 261 326 22 22 chr2 29518299 29518391 -223738192 - L2 LINE L2 -27 3245 3154 213 275 14 43 chr2 29520178 29520247 -223736336 - L2 LINE L2 0 3272 3206 527 178 68 0 chr2 29520678 29520796 -223735787 + L1MB5 LINE L1 6049 6174 0 188 248 88 88 chr2 29520866 29520979 -223735604 + MIR SINE MIR 46 158 -104 341 218 162 73 chr2 29521545 29521779 -223734804 + L1MEd LINE L1 467 721 -5398 328 264 34 0 chr2 29522337 29522424 -223734159 - MIR SINE MIR -33 175 83 2357 97 0 0 chr2 29522644 29522943 -223733640 - AluSx SINE Alu -12 300 2 1192 86 114 68 chr2 29523013 29523108 -223733475 - MER30 DNA MER1_type 0 230 141 198 0 0 0 chr2 29523108 29523130 -223733453 + (TG)n Simple_repeat Simple_repeat 1 22 0 1192 86 114 68 chr2 29523130 29523254 -223733329 - MER30 DNA MER1_type -89 141 1 455 236 110 0 chr2 29523565 29523692 -223732891 - MIR SINE MIR -6 256 116 2086 144 0 10 chr2 29523982 29524288 -223732295 - AluJb SINE Alu -9 303 1 1276 108 216 34 chr2 29524293 29524589 -223731994 - Tigger7 DNA MER2_type -22 2565 2216 284 214 0 0 chr2 29524585 29524641 -223731942 - Tigger7 DNA MER2_type -648 57 2 * 902 176 132 16 chr2 29524649 29524899 -223731684 + LTR37B LTR ERV1 6 284 -184 183 202 277 67 chr2 29525376 29525495 -223731088 + MIR SINE MIR 116 259 -3 954 220 23 0 chr2 29526136 29526309 -223730274 - MER45A DNA AcHobo -1 177 1 360 277 30 0 chr2 29526766 29526867 -223729716 + MIR SINE MIR 159 262 0 1792 208 184 123 chr2 29527168 29527223 -223729360 - Charlie7 DNA MER1_type -41 2571 2521 1919 147 41 32 chr2 29527223 29527354 -223729229 + MER2 DNA MER2_type 1 129 -215 1851 120 62 38 chr2 29527354 29527645 -223728938 - AluSq SINE Alu -15 298 1 1919 147 41 32 chr2 29527645 29527854 -223728729 + MER2 DNA MER2_type 129 344 0 1792 208 184 123 chr2 29527854 29528237 -223728346 - Charlie7 DNA MER1_type -91 2521 2163 2159 107 0 4 chr2 29528237 29528517 -223728066 - AluSg SINE Alu -31 279 1 1792 208 184 123 chr2 29528517 29529781 -223726802 - Charlie7 DNA MER1_type -449 2163 756 2205 120 0 7 chr2 29529781 29530081 -223726502 + AluSx SINE Alu 3 300 -12 1792 208 184 123 chr2 29530081 29530133 -223726450 - Charlie7 DNA MER1_type -1856 756 709 2298 111 3 0 chr2 29530318 29530624 -223725959 - AluSg SINE Alu -3 307 1 818 234 233 54 chr2 29530624 29531217 -223725366 - Charlie7 DNA MER1_type -1879 733 35 447 301 7 33 chr2 29532027 29532180 -223724403 + MER5A DNA MER1_type 13 161 -28 740 183 8 0 chr2 29532528 29532654 -223723929 + FLAM_C SINE Alu 1 127 -16 2161 138 0 19 chr2 29532772 29532951 -223723632 - AluSx SINE Alu 0 312 131 2310 114 0 9 chr2 29532951 29533266 -223723317 - AluSq SINE Alu -1 312 1 185 0 0 39 chr2 29533266 29533292 -223723291 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2157 117 7 0 chr2 29533292 29533575 -223723008 - AluSq SINE Alu -28 285 1 2161 138 0 19 chr2 29533575 29533711 -223722872 - AluSx SINE Alu -178 134 1 801 179 87 0 chr2 29534702 29534875 -223721708 - MER53 DNA DNA 0 189 2 2198 138 0 0 chr2 29534961 29535265 -223721318 + AluSx SINE Alu 1 304 -8 373 322 112 13 chr2 29535611 29535763 -223720820 + MIR SINE MIR 2 168 -94 1819 198 75 19 chr2 29535781 29536245 -223720338 - L1ME1 LINE L1 -211 5955 5466 401 319 43 0 chr2 29536245 29536361 -223720222 + MIR SINE MIR 21 141 -121 206 339 0 0 chr2 29537087 29537143 -223719440 - MER5A DNA MER1_type -71 118 63 855 161 0 22 chr2 29537152 29537289 -223719294 + AluJb SINE Alu 1 134 -178 22 0 0 0 chr2 29537329 29537351 -223719232 + AT_rich Low_complexity Low_complexity 1 22 0 467 290 53 38 chr2 29537390 29537521 -223719062 + MER5A DNA MER1_type 1 133 -56 1736 144 36 7 chr2 29537521 29537826 -223718757 - AluSx SINE Alu 0 313 1 2199 105 13 20 chr2 29537857 29538162 -223718421 + AluSx SINE Alu 1 303 -9 405 261 63 14 chr2 29538394 29538536 -223718047 - MER103 DNA DNA -4 162 14 346 242 30 68 chr2 29539319 29539451 -223717132 + MIR SINE MIR 70 196 -66 415 324 68 0 chr2 29539930 29540078 -223716505 + MIR SINE MIR 13 170 -92 231 310 42 0 chr2 29540632 29540703 -223715880 + MER5A DNA MER1_type 116 189 0 348 271 146 0 chr2 29540790 29540886 -223715697 - L2 LINE L2 -5 3308 3199 1923 156 190 46 chr2 29541104 29541604 -223714979 + LTR18B LTR ERVL 1 572 -42 362 105 12 93 chr2 29541597 29541683 -223714900 + LTR18A LTR ERVL 279 357 0 * 195 175 32 16 chr2 29541715 29541778 -223714805 + CT-rich Low_complexity Low_complexity 4 67 0 3439 81 32 6 chr2 29542732 29543201 -223713382 - L1PA10 LINE L1 -16 6152 5672 306 276 82 41 chr2 29543401 29543571 -223713012 - MIR SINE MIR -75 187 11 2596 72 3 0 chr2 29544731 29545038 -223711545 + AluSg SINE Alu 1 308 -2 855 158 82 0 chr2 29545570 29545716 -223710867 - MER5A DNA MER1_type -29 160 3 924 82 0 0 chr2 29546183 29546293 -223710290 - AluSq/x SINE Alu -203 110 1 243 247 0 49 chr2 29546295 29546376 -223710207 + MLT1J LTR MaLR 429 505 -6 1145 150 0 0 chr2 29546595 29546762 -223709821 + AluSg/x SINE Alu 134 300 -12 974 158 228 0 chr2 29546909 29547150 -223709433 + L1MB2 LINE L1 5835 6130 -41 1867 143 0 21 chr2 29547150 29547436 -223709147 + AluSx SINE Alu 1 280 -32 217 331 43 31 chr2 29548815 29548978 -223707605 - L2 LINE L2 -1285 2029 1865 254 214 0 0 chr2 29548981 29549023 -223707560 + MER91B DNA MER1_type 1 42 -148 2345 99 21 51 chr2 29549045 29549221 -223707362 + THE1B LTR MaLR 1 181 -183 2313 90 16 16 chr2 29549221 29549544 -223707039 + L1PA10 LINE L1 5846 6168 0 2345 99 21 51 chr2 29549544 29549742 -223706841 + THE1B LTR MaLR 181 364 0 520 237 35 0 chr2 29549754 29549868 -223706715 + MER91B DNA MER1_type 73 190 0 1562 216 58 21 chr2 29549959 29550339 -223706244 - MLT1F1 LTR MaLR 0 567 174 300 200 0 0 chr2 29550339 29550404 -223706179 + G-rich Low_complexity Low_complexity 1 65 0 523 252 57 25 chr2 29550413 29550572 -223706011 - MLT1F1 LTR MaLR -369 173 10 249 307 67 0 chr2 29551802 29551877 -223704706 + L2 LINE L2 3168 3247 -25 1909 147 7 23 chr2 29552110 29552417 -223704166 + AluJo SINE Alu 11 312 0 368 299 21 0 chr2 29552463 29552560 -223704023 + L2 LINE L2 3168 3266 -6 524 229 0 89 chr2 29552905 29553062 -223703521 + MIR3 SINE MIR 66 208 0 315 308 90 14 chr2 29553291 29553429 -223703154 + MIR3 SINE MIR 3 151 -69 2226 83 21 0 chr2 29553590 29553880 -223702703 - AluSq SINE Alu -17 296 1 379 271 0 9 chr2 29553999 29554106 -223702477 + MIR SINE MIR 59 164 -98 325 263 158 30 chr2 29554470 29554603 -223701980 + MER91A DNA MER1_type 37 186 -10 868 177 78 5 chr2 29556061 29556253 -223700330 - MER115 DNA AcHobo -8 685 480 703 262 11 47 chr2 29556315 29556506 -223700077 - MER115 DNA AcHobo -324 369 186 593 174 0 0 chr2 29556593 29556685 -223699898 + FRAM SINE Alu 1 92 -84 519 290 16 0 chr2 29556686 29556810 -223699773 - MER115 DNA AcHobo -516 177 52 659 148 0 0 chr2 29556839 29556940 -223699643 + FRAM SINE Alu 55 155 -21 1670 142 3 71 chr2 29557014 29557338 -223699245 + AluJb SINE Alu 1 302 -10 355 257 270 0 chr2 29557415 29557563 -223699020 + MIR SINE MIR 73 260 -2 336 319 75 27 chr2 29558016 29558204 -223698379 - MIR SINE MIR -1 261 65 557 282 97 5 chr2 29559868 29560063 -223696520 + MIR SINE MIR 46 258 -4 220 258 16 0 chr2 29560146 29560208 -223696375 + MIR SINE MIR 188 250 -12 504 136 123 0 chr2 29560845 29560926 -223695657 + 5S rRNA rRNA 1 91 -30 2563 137 54 5 chr2 29562432 29562840 -223693743 + MSTA LTR MaLR 1 428 0 271 295 0 0 chr2 29563021 29563082 -223693501 + L2 LINE L2 2424 2484 -830 260 301 66 71 chr2 29563194 29563333 -223693250 + L2 LINE L2 3075 3214 -58 2119 101 7 0 chr2 29563333 29563630 -223692953 - AluSx SINE Alu -13 299 1 260 301 66 71 chr2 29563630 29563686 -223692897 + L2 LINE L2 3214 3269 -3 633 277 11 113 chr2 29564024 29564298 -223692285 - MIR SINE MIR -5 257 12 247 226 202 45 chr2 29564521 29564674 -223691909 + MIR3 SINE MIR 20 204 -4 1916 156 0 7 chr2 29565043 29565350 -223691233 + AluSx SINE Alu 1 305 -7 268 225 50 38 chr2 29565516 29565596 -223690987 + MIR SINE MIR 123 203 -59 1956 131 60 35 chr2 29565665 29566031 -223690552 - THE1C LTR MaLR 0 375 1 1050 171 11 11 chr2 29566336 29566512 -223690071 - MER58A DNA MER1_type -3 221 46 1610 201 3 0 chr2 29566512 29566816 -223689767 + AluJo SINE Alu 1 305 -7 976 152 6 12 chr2 29566817 29566988 -223689595 + AluJo/FRAM SINE Alu 132 301 -11 2153 106 0 10 chr2 29567072 29567375 -223689208 - AluSx SINE Alu -12 300 1 2262 101 3 0 chr2 29567386 29567693 -223688890 - AluSx SINE Alu -4 308 1 317 160 0 0 chr2 29567838 29567888 -223688695 + Tigger5 DNA MER2_type 1 50 -2273 465 239 0 0 chr2 29567929 29568017 -223688566 - Tigger5 DNA MER2_type -2235 88 1 498 207 0 0 chr2 29568028 29568115 -223688468 + Tigger5 DNA MER2_type 2237 2323 0 420 212 119 42 chr2 29568122 29568133 -223688450 - MIR SINE MIR -89 173 164 2106 120 10 0 chr2 29568133 29568441 -223688142 - AluSx SINE Alu -1 311 1 420 212 119 42 chr2 29568441 29568547 -223688036 - MIR SINE MIR -98 164 47 234 62 0 0 chr2 29569189 29569221 -223687362 + (CA)n Simple_repeat Simple_repeat 2 33 0 1202 284 88 10 chr2 29570035 29570514 -223686069 - LTR33A LTR ERVL -6 517 2 551 344 99 32 chr2 29570798 29571173 -223685410 - L2 LINE L2 -49 3223 2824 1836 203 46 3 chr2 29571250 29571600 -223684983 - MLT1A1 LTR MaLR 0 365 1 1772 101 12 0 chr2 29571641 29571923 -223684660 + AluSx SINE Alu 32 316 0 264 277 0 0 chr2 29572090 29572173 -223684410 + GA-rich Low_complexity Low_complexity 2 84 0 1458 168 50 26 chr2 29572730 29573033 -223683550 + AluJo SINE Alu 1 310 -2 923 148 12 6 chr2 29573507 29573669 -223682914 + FRAM SINE Alu 1 162 -14 3791 139 17 16 chr2 29573851 29574482 -223682101 + L1MB3 LINE L1 5552 6183 0 268 235 0 122 chr2 29574806 29574867 -223681716 + MIR SINE MIR 65 111 -151 885 149 0 8 chr2 29574867 29575001 -223681582 - FLAM_C SINE Alu 0 133 1 268 235 0 122 chr2 29575001 29575037 -223681546 + MIR SINE MIR 111 150 -112 413 81 16 0 chr2 29575075 29575137 -223681446 + (TCC)n Simple_repeat Simple_repeat 1 63 0 790 237 48 5 chr2 29575137 29575323 -223681260 - AluJo SINE Alu -1 311 118 223 419 22 7 chr2 29575406 29575542 -223681041 - MIR3 SINE MIR -62 146 9 546 255 103 0 chr2 29575610 29575755 -223680828 + MIR SINE MIR 20 179 -83 1823 164 3 19 chr2 29575838 29576197 -223680386 + AluJo SINE Alu 1 354 0 1995 123 7 10 chr2 29576200 29576508 -223680075 + AluSx SINE Alu 1 307 -5 1931 114 0 0 chr2 29577405 29577668 -223678915 + AluSx SINE Alu 20 282 -30 234 0 0 0 chr2 29577670 29577696 -223678887 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 616 288 61 10 chr2 29577834 29578032 -223678551 + MIR SINE MIR 49 256 -6 2484 58 0 0 chr2 29578174 29578482 -223678101 + AluY SINE Alu 1 308 -3 1958 139 0 13 chr2 29578727 29579030 -223677553 + AluJb SINE Alu 1 299 -13 233 367 25 25 chr2 29579616 29579736 -223676847 + L2 LINE L2 3183 3302 -11 1187 224 94 63 chr2 29579933 29580008 -223676575 - MLT1D LTR MaLR 0 505 434 1930 114 47 0 chr2 29580008 29580305 -223676278 + AluSx SINE Alu 1 311 -1 1187 224 94 63 chr2 29580305 29580719 -223675864 - MLT1D LTR MaLR -71 434 1 1767 160 3 0 chr2 29580747 29581040 -223675543 + AluSx SINE Alu 1 294 -18 473 289 200 6 chr2 29581431 29581611 -223674972 - MIR SINE MIR -40 222 8 467 266 55 16 chr2 29582176 29582304 -223674279 - MIR3 SINE MIR -53 155 23 300 335 30 68 chr2 29582465 29582701 -223673882 + L2 LINE L2 2967 3193 -79 1713 176 113 93 chr2 29583141 29583268 -223673315 + MLT1D LTR MaLR 1 124 -381 1584 119 0 58 chr2 29583268 29583529 -223673054 + AluJb SINE Alu 43 288 -24 1713 176 113 93 chr2 29583529 29583636 -223672947 + MLT1D LTR MaLR 124 227 -278 222 37 0 0 chr2 29583636 29583663 -223672920 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 540 0 0 0 chr2 29583662 29583722 -223672861 + (GA)n Simple_repeat Simple_repeat 2 61 0 1713 176 113 93 chr2 29583663 29583981 -223672602 + MLT1D LTR MaLR 227 505 0 638 239 105 47 chr2 29584108 29584330 -223672253 - MIR SINE MIR -2 260 7 475 242 32 24 chr2 29584409 29584533 -223672050 - MIR SINE MIR -16 246 122 1438 173 83 0 chr2 29585391 29585669 -223670914 + AluJb SINE Alu 1 301 -11 449 252 154 14 chr2 29585669 29585812 -223670771 + MIR3 SINE MIR 27 189 -19 1940 104 0 85 chr2 29586569 29586897 -223669686 - AluSx SINE Alu -12 300 1 620 254 149 31 chr2 29587275 29587503 -223669080 - MIR SINE MIR 0 262 8 270 302 47 47 chr2 29587498 29587627 -223668956 + L2 LINE L2 3138 3266 -6 * 449 147 368 0 chr2 29588247 29588342 -223668241 - FLAM_C SINE Alu -3 130 1 482 43 159 0 chr2 29588420 29588489 -223668094 + MADE1 DNA Mariner 1 80 0 2001 79 0 0 chr2 29588804 29589069 -223667514 + AluY SINE Alu 41 305 -6 536 292 52 26 chr2 29589290 29589460 -223667123 - MIR SINE MIR -48 214 50 2008 111 0 7 chr2 29589460 29589775 -223666808 + AluSx SINE Alu 5 317 0 536 292 52 26 chr2 29589775 29589788 -223666795 - MIR SINE MIR -212 50 39 356 73 36 0 chr2 29589788 29589843 -223666740 + L1MA6 LINE L1 6244 6300 0 246 192 0 39 chr2 29589882 29589934 -223666649 - MIR SINE MIR -208 54 5 21 0 0 0 chr2 29590010 29590031 -223666552 + AT_rich Low_complexity Low_complexity 1 21 0 2172 106 0 10 chr2 29590184 29590487 -223666096 + AluSq SINE Alu 1 300 -13 731 157 0 0 chr2 29590790 29590911 -223665672 - FLAM_C SINE Alu 0 143 23 526 332 44 22 chr2 29591065 29591339 -223665244 + L1MEc LINE L1 2120 2399 -3997 1395 182 91 0 chr2 29591345 29591609 -223664974 + AluJo SINE Alu 1 288 -24 24 0 0 0 chr2 29591610 29591634 -223664949 + AT_rich Low_complexity Low_complexity 1 24 0 820 181 22 22 chr2 29591634 29591816 -223664767 + FRAM SINE Alu 1 176 0 318 300 25 33 chr2 29591816 29591936 -223664647 + L1MEc LINE L1 2363 2481 -3734 2170 79 3 0 chr2 29591947 29592238 -223664345 + AluY SINE Alu 1 292 -19 341 260 80 20 chr2 29592391 29592491 -223664092 - L2 LINE L2 -12 3301 3196 2093 104 3 7 chr2 29592542 29592840 -223663743 - AluSc SINE Alu -12 297 1 419 280 10 10 chr2 29594314 29594414 -223662169 - L2 LINE L2 -14 3299 3200 359 311 44 27 chr2 29594420 29594603 -223661980 - L2 LINE L2 -252 3061 2876 1780 122 70 0 chr2 29594671 29594941 -223661642 + AluSx SINE Alu 1 289 -23 207 0 0 0 chr2 29594941 29594964 -223661619 + (GA)n Simple_repeat Simple_repeat 2 24 0 2466 47 0 0 chr2 29595102 29595398 -223661185 - AluY SINE Alu -15 296 1 1874 136 0 23 chr2 29595683 29595991 -223660592 + AluSx SINE Alu 1 301 -11 1846 159 3 3 chr2 29596297 29596605 -223659978 - AluSx SINE Alu -4 308 1 209 328 16 0 chr2 29596680 29596744 -223659839 + L3 LINE CR1 1297 1361 -216 1920 129 20 0 chr2 29596775 29597069 -223659514 + AluSq SINE Alu 1 300 -13 193 125 31 0 chr2 29597161 29597193 -223659390 + MIR3 SINE MIR 165 197 -11 1320 164 4 13 chr2 29597274 29597506 -223659077 + L1M4 LINE L1 5374 5603 -581 1877 124 0 0 chr2 29597510 29597783 -223658800 + AluSg SINE Alu 29 301 -9 1998 218 107 43 chr2 29597934 29598025 -223658558 + Zaphod DNA AcHobo 2 86 -3945 2152 123 7 0 chr2 29598025 29598335 -223658248 + AluSx SINE Alu 1 312 0 1998 218 107 43 chr2 29598335 29598802 -223657781 + Zaphod DNA AcHobo 86 596 -3435 1221 152 5 0 chr2 29598815 29599012 -223657571 - AluJb SINE Alu -31 281 84 689 107 54 0 chr2 29599012 29599124 -223657459 + FLAM_C SINE Alu 14 131 -12 573 149 95 68 chr2 29599125 29599346 -223657237 + Zaphod DNA AcHobo 764 990 -3041 * 710 204 102 34 chr2 29599345 29599595 -223656988 + Zaphod DNA AcHobo 3596 3875 -156 1934 96 14 7 chr2 29599595 29599899 -223656684 + AluSq SINE Alu 1 306 0 710 204 102 34 chr2 29599899 29599970 -223656613 + Zaphod DNA AcHobo 3875 3940 -91 1732 108 81 0 chr2 29599972 29600231 -223656352 + AluSx SINE Alu 1 280 -32 2172 92 20 0 chr2 29600253 29600556 -223656027 + AluY SINE Alu 1 309 -2 483 325 13 0 chr2 29600589 29600740 -223655843 - MER91A DNA MER1_type -43 153 1 239 291 105 12 chr2 29602276 29602362 -223654221 - L2 LINE L2 -21 3251 3158 1656 150 65 0 chr2 29602587 29602880 -223653703 - AluSx SINE Alu 0 312 1 1985 108 7 43 chr2 29603567 29603872 -223652711 + AluSx SINE Alu 1 294 -18 924 215 23 41 chr2 29604765 29604880 -223651703 + MER58C DNA MER1_type 1 117 -2303 1913 153 7 0 chr2 29604880 29605206 -223651377 + AluSx SINE Alu 1 328 0 1981 129 3 3 chr2 29605209 29605533 -223651050 + AluSx SINE Alu 1 324 0 924 215 23 41 chr2 29605533 29605630 -223650953 + MER58C DNA MER1_type 119 215 0 324 120 0 0 chr2 29606460 29606510 -223650073 + (TG)n Simple_repeat Simple_repeat 1 50 0 347 155 0 14 chr2 29606945 29607016 -223649567 + CT-rich Low_complexity Low_complexity 4 73 0 868 291 70 49 chr2 29607022 29607468 -223649115 - L2 LINE L2 -14 3299 2845 1700 151 51 14 chr2 29607503 29607795 -223648788 + AluJo SINE Alu 3 305 -7 1723 164 7 0 chr2 29608055 29608341 -223648242 - AluSx SINE Alu 0 312 25 8903 178 97 50 chr2 29608532 29608990 -223647593 - Cheshire DNA MER1_type -202 2218 1783 1696 169 37 7 chr2 29608990 29609286 -223647297 + AluJb SINE Alu 1 305 -7 8903 178 97 50 chr2 29609286 29610156 -223646427 - Cheshire DNA MER1_type -637 1783 956 2434 68 3 0 chr2 29610156 29610450 -223646133 + AluY SINE Alu 1 295 -16 8903 178 97 50 chr2 29610450 29611232 -223645351 - Cheshire DNA MER1_type -1464 956 7 211 161 286 0 chr2 29611291 29611347 -223645236 + MIR SINE MIR 32 103 -105 324 311 62 62 chr2 29611484 29611905 -223644678 + L1ME LINE L1 492 991 -5539 969 266 125 17 chr2 29612145 29612592 -223643991 + L1ME LINE L1 1404 1801 -4920 1604 103 5 5 chr2 29612592 29612816 -223643767 - AluSp SINE Alu -15 298 75 969 266 125 17 chr2 29612816 29613098 -223643485 + L1ME LINE L1 1801 2280 -4441 759 228 50 8 chr2 29613101 29613341 -223643242 + L1ME LINE L1 2354 2563 -3977 1847 126 38 0 chr2 29613341 29613604 -223642979 + AluSq SINE Alu 1 273 -40 2438 86 0 9 chr2 29614193 29614508 -223642075 + AluSq SINE Alu 1 312 -1 1757 185 17 0 chr2 29614744 29615041 -223641542 - AluJo SINE Alu -7 305 4 1473 154 0 0 chr2 29615051 29615271 -223641312 - AluJb SINE Alu -7 305 86 2353 98 3 0 chr2 29615297 29615602 -223640981 - AluSc SINE Alu -3 306 1 315 317 41 8 chr2 29615603 29615726 -223640857 + MER5A DNA MER1_type 63 189 0 * 780 237 20 41 chr2 29615726 29615921 -223640662 + MIR SINE MIR 71 260 -2 2188 105 14 0 chr2 29615944 29616239 -223640344 - AluSx SINE Alu -13 299 1 307 234 26 0 chr2 29616303 29616380 -223640203 - MER110 LTR ERV1 -42 449 371 1576 176 59 7 chr2 29616510 29616782 -223639801 + AluJo SINE Alu 12 297 -15 2206 128 0 7 chr2 29617005 29617311 -223639272 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 29617311 29617334 -223639249 + AT_rich Low_complexity Low_complexity 1 23 0 1410 131 0 0 chr2 29617752 29617943 -223638640 - AluSx SINE Alu -121 191 1 263 342 18 0 chr2 29618551 29618665 -223637918 - L1ME3 LINE L1 -2 6160 6045 1232 194 0 0 chr2 29618671 29618887 -223637696 + AluJb SINE Alu 97 312 0 629 162 28 35 chr2 29618893 29619035 -223637548 - L1ME3 LINE L1 -112 6050 5910 439 153 0 0 chr2 29619040 29619099 -223637484 - AluJo SINE Alu -22 290 232 957 180 6 34 chr2 29619103 29619281 -223637302 - AluJo SINE Alu -139 173 1 2612 220 88 37 chr2 29619283 29620082 -223636501 - L1ME3 LINE L1 -256 5906 5017 2338 100 17 0 chr2 29620082 29620383 -223636200 + AluSq SINE Alu 1 306 -7 2612 220 88 37 chr2 29620383 29620798 -223635785 - L1ME3 LINE L1 -1145 5017 4625 2271 128 0 0 chr2 29620822 29621134 -223635449 - AluSx SINE Alu 0 312 1 553 276 76 77 chr2 29621546 29621825 -223634758 + L2 LINE L2 2722 3000 -313 213 39 0 0 chr2 29621825 29621851 -223634732 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1968 122 7 0 chr2 29621853 29622132 -223634451 - AluSx SINE Alu -31 281 1 553 276 76 77 chr2 29622132 29622252 -223634331 + L2 LINE L2 3001 3139 -174 414 0 0 0 chr2 29622253 29622299 -223634284 + (CA)n Simple_repeat Simple_repeat 2 47 0 357 250 120 0 chr2 29622322 29622414 -223634169 + MER81 DNA DNA 8 110 -4 611 229 38 8 chr2 29622414 29622545 -223634038 + L2 LINE L2 3179 3313 0 3232 141 20 6 chr2 29622996 29623534 -223633049 + L1MA4 LINE L1 5747 6292 -8 5515 165 14 3 chr2 29623718 29624664 -223631919 - L1PA14 LINE L1 -1432 4714 3759 6525 79 26 21 chr2 29624664 29624754 -223631829 + L1PA14 LINE L1 4728 4816 -1345 2035 88 3 61 chr2 29624754 29625094 -223631489 + AluSg SINE Alu 1 323 0 6525 79 26 21 chr2 29625094 29626100 -223630483 + L1PA14 LINE L1 4816 5821 -340 2062 147 0 6 chr2 29626100 29626413 -223630170 + AluSx SINE Alu 1 311 -1 6525 79 26 21 chr2 29626413 29626747 -223629836 + L1PA14 LINE L1 5821 6152 -9 261 277 133 43 chr2 29627058 29627246 -223629337 + MIR SINE MIR 31 235 -27 200 371 72 21 chr2 29627712 29627762 -223628821 + MIR SINE MIR 44 90 -118 1645 187 7 7 chr2 29627762 29628061 -223628522 - AluJo SINE Alu -13 299 1 200 371 72 21 chr2 29628061 29628107 -223628476 + MIR SINE MIR 90 145 -63 346 317 50 8 chr2 29628724 29628844 -223627739 - MIR3 SINE MIR -3 205 81 26 30 0 0 chr2 29629121 29629154 -223627429 + AT_rich Low_complexity Low_complexity 1 33 0 1855 136 42 3 chr2 29629384 29629671 -223626912 + AluJo SINE Alu 1 298 -14 26 0 0 0 chr2 29630939 29630965 -223625618 + AT_rich Low_complexity Low_complexity 1 26 0 243 238 143 0 chr2 29631157 29631241 -223625342 + L1ME4a LINE L1 6009 6104 -17 248 306 31 0 chr2 29631272 29631370 -223625213 + MER46C DNA MER2_type 194 294 -44 787 228 114 17 chr2 29632507 29632744 -223623839 + MIR SINE MIR 3 262 0 2315 67 3 19 chr2 29635691 29636003 -223620580 - AluSg1 SINE Alu -1 308 2 28 95 0 0 chr2 29636003 29636087 -223620496 + AT_rich Low_complexity Low_complexity 1 84 0 203 191 0 24 chr2 29636412 29636454 -223620129 - L2 LINE L2 -81 3191 3151 1874 114 40 10 chr2 29637009 29637306 -223619277 - AluSq SINE Alu -7 306 1 364 261 98 25 chr2 29637916 29638119 -223618464 - L1ME4a LINE L1 -81 6040 5823 1497 168 0 15 chr2 29638492 29638754 -223617829 - AluJo SINE Alu -54 258 1 2959 136 67 40 chr2 29638847 29639428 -223617155 - L1MB8 LINE L1 -9 6169 5573 1055 147 80 59 chr2 29639993 29640231 -223616352 - AluJo SINE Alu 0 312 70 754 220 56 60 chr2 29641011 29641200 -223615383 + Tigger3b DNA MER2_type 17 206 -1025 674 291 17 30 chr2 29641200 29641502 -223615081 + AluSx SINE Alu 1 298 -4 754 220 56 60 chr2 29641502 29641544 -223615039 + Tigger3b DNA MER2_type 206 247 -984 1946 112 0 0 chr2 29641710 29641970 -223614613 - AluSq SINE Alu -53 260 1 1706 163 7 17 chr2 29642353 29642653 -223613930 - AluJb SINE Alu -15 297 1 1195 179 153 48 chr2 29642653 29642921 -223613662 - AluJo SINE Alu -6 296 1 2324 93 10 0 chr2 29643494 29643804 -223612779 - AluSp SINE Alu 0 313 1 309 195 155 63 chr2 29644374 29644548 -223612035 + L1M4 LINE L1 5194 5383 -763 209 222 0 74 chr2 29644831 29644885 -223611698 + L2 LINE L2 3209 3258 -14 2143 141 0 3 chr2 29644885 29645198 -223611385 - AluSp SINE Alu -1 312 1 1658 229 113 22 chr2 29645501 29645960 -223610623 - MLT1F1 LTR MaLR 0 567 67 330 313 21 10 chr2 29647065 29647161 -223609422 - L2 LINE L2 -24 3289 3193 2298 102 0 6 chr2 29647310 29647625 -223608958 - AluSp SINE Alu 0 313 1 1335 161 68 14 chr2 29648448 29648740 -223607843 - L1MA8 LINE L1 -2 6289 5982 22 35 0 0 chr2 29649223 29649252 -223607331 + AT_rich Low_complexity Low_complexity 1 29 0 2324 92 0 3 chr2 29650709 29651004 -223605579 + AluSg SINE Alu 1 294 -16 571 165 41 21 chr2 29651687 29651784 -223604799 - FLAM_A SINE Alu -32 110 12 777 153 0 36 chr2 29651868 29652005 -223604578 + AluJo/FLAM SINE Alu 1 132 -170 285 229 0 16 chr2 29652005 29652066 -223604517 + AluSg/x SINE Alu 134 193 -109 * 1348 219 59 0 chr2 29652044 29652314 -223604269 + MLT1A1 LTR MaLR 55 340 -25 2298 128 53 14 chr2 29652458 29652895 -223603688 + Tigger3b DNA MER2_type 325 778 -453 1290 161 141 16 chr2 29652889 29653144 -223603439 + Tigger3b DNA MER2_type 945 1231 0 * 1893 113 46 14 chr2 29653438 29653722 -223602861 - AluSg SINE Alu -17 293 1 4644 191 66 34 chr2 29654385 29654534 -223602049 - Charlie1a DNA MER1_type -1306 1455 1312 2035 127 7 10 chr2 29654534 29654833 -223601750 + AluSx SINE Alu 1 298 -14 4644 191 66 34 chr2 29654833 29655994 -223600589 - Charlie1a DNA MER1_type -1449 1312 104 2148 100 10 3 chr2 29656243 29656533 -223600050 - AluSg SINE Alu -18 292 1 260 287 11 11 chr2 29656631 29656711 -223599872 + GA-rich Low_complexity Low_complexity 2 84 -4 2278 108 0 0 chr2 29656711 29657007 -223599576 + AluY SINE Alu 1 296 -15 1488 155 36 8 chr2 29657211 29657463 -223599120 + AluSx SINE Alu 36 294 -18 1033 269 104 40 chr2 29657621 29658164 -223598419 - L1M4 LINE L1 -968 5247 4646 2277 95 10 0 chr2 29658164 29658460 -223598123 + AluSq SINE Alu 1 299 -14 1033 269 104 40 chr2 29658460 29658625 -223597958 - L1M4 LINE L1 -1569 4646 4493 1174 259 63 67 chr2 29658646 29659243 -223597340 - L1MEc LINE L1 -3372 2843 2273 2204 105 21 0 chr2 29659243 29659529 -223597054 - AluSx SINE Alu -20 292 1 1174 259 63 67 chr2 29659529 29659717 -223596866 - L1MEc LINE L1 -3942 2273 2086 1819 59 40 0 chr2 29659979 29660201 -223596382 + AluY SINE Alu 73 303 -8 2444 59 0 0 chr2 29660579 29660867 -223595716 + AluY SINE Alu 1 288 -23 340 271 54 36 chr2 29661588 29661754 -223594829 + MER104 DNA Tc2 6 174 -6 956 261 193 27 chr2 29662401 29662714 -223593869 - L1ME3A LINE L1 -14 6156 5896 1326 149 40 4 chr2 29662714 29662942 -223593641 + MER46A DNA MER2_type 1 236 0 956 261 193 27 chr2 29662942 29663286 -223593297 - L1ME3A LINE L1 -274 5896 5390 1934 125 57 0 chr2 29663287 29663567 -223593016 - AluSx SINE Alu -16 296 1 646 227 50 12 chr2 29663567 29663808 -223592775 - L1MEc LINE L1 -3977 2268 2029 228 209 30 15 chr2 29663811 29663878 -223592705 - L1MEc LINE L1 -4441 1955 1888 1999 151 0 22 chr2 29664314 29664625 -223591958 - AluJo SINE Alu -8 304 1 285 292 97 19 chr2 29664708 29664862 -223591721 - MIR SINE MIR -83 179 14 181 356 22 22 chr2 29765508 29765598 -223490985 - L2 LINE L2 -1036 2278 2189 206 318 55 9 chr2 29765910 29766020 -223490563 + L2 LINE L2 1595 1709 -1605 219 309 82 45 chr2 29766058 29766278 -223490305 + L2 LINE L2 1698 1925 -1389 2018 135 0 3 chr2 29766459 29766762 -223489821 - AluSx SINE Alu -10 302 1 1717 116 43 53 chr2 29766815 29767116 -223489467 - AluJb SINE Alu -14 298 1 672 117 97 0 chr2 29767116 29767219 -223489364 - AluSq/x SINE Alu -177 135 23 328 295 0 0 chr2 29767222 29767300 -223489283 - MIR SINE MIR -114 148 71 207 329 41 0 chr2 29768199 29768272 -223488311 - MIR3 SINE MIR 0 208 133 479 30 0 15 chr2 29768384 29768450 -223488133 + (TG)n Simple_repeat Simple_repeat 1 65 0 461 242 139 33 chr2 29768481 29768696 -223487887 - MIR SINE MIR -4 258 21 2210 112 0 28 chr2 29770187 29770508 -223486075 + AluSx SINE Alu 1 312 0 210 316 53 11 chr2 29770524 29770619 -223485964 + MER5A DNA MER1_type 86 184 -5 186 39 0 118 chr2 29771091 29771142 -223485441 + (GGCTG)n Simple_repeat Simple_repeat 5 49 0 191 139 83 0 chr2 29772733 29772769 -223483814 + MIR SINE MIR 115 153 -55 421 224 122 0 chr2 29773096 29773203 -223483380 - MIR SINE MIR -56 152 33 4126 116 24 41 chr2 29773511 29773948 -223482635 - L1MA4 LINE L1 0 6300 5878 1839 100 90 10 chr2 29773948 29774238 -223482345 + AluSq SINE Alu 1 313 0 4126 116 24 41 chr2 29774238 29774480 -223482103 - L1MA4 LINE L1 -422 5878 5633 1015 171 104 0 chr2 29774480 29774720 -223481863 + L1 LINE L1 5101 5365 -781 251 273 157 36 chr2 29777050 29777299 -223479284 + L2 LINE L2 2600 2878 -436 396 270 169 49 chr2 29777402 29777669 -223478914 + L2 LINE L2 3014 3312 -1 537 308 66 0 chr2 29777728 29777926 -223478657 + MIR SINE MIR 52 262 0 1044 142 41 0 chr2 29778737 29778906 -223477677 - AluSg/x SINE Alu -3 307 132 2066 89 27 7 chr2 29778906 29779198 -223477385 - AluSx SINE Alu -14 298 1 264 298 48 0 chr2 29779549 29779633 -223476950 - MIR3 SINE MIR -40 168 81 686 237 54 0 chr2 29780492 29780678 -223475905 + MIR3 SINE MIR 6 201 -7 472 100 0 0 chr2 29781413 29781473 -223475110 - Alu SINE Alu -26 285 226 961 275 58 3 chr2 29781621 29781930 -223474653 + HsTC2 DNA Tc2 215 540 -1358 255 210 0 62 chr2 29781936 29782017 -223474566 + HsTC2 DNA Tc2 1822 1897 -1 433 345 125 12 chr2 29782041 29782550 -223474033 + L2 LINE L2 2487 3058 -214 621 245 173 3 chr2 29782626 29782949 -223473634 + L1ME4a LINE L1 5741 6118 -3 364 327 133 20 chr2 29784423 29784671 -223471912 + L2 LINE L2 2997 3272 0 244 296 157 26 chr2 29784860 29784975 -223471608 + L3 LINE CR1 1435 1564 -13 2070 133 0 3 chr2 29784990 29785292 -223471291 + AluSg SINE Alu 1 301 -9 519 276 65 61 chr2 29786226 29786472 -223470111 + MIR SINE MIR 10 256 -6 197 258 32 0 chr2 29787085 29787147 -223469436 - MIR3 SINE MIR -24 184 121 1554 133 115 18 chr2 29788587 29788865 -223467718 - AluSg SINE Alu -5 305 1 218 271 71 0 chr2 29789000 29789070 -223467513 + L3b LINE CR1 1285 1359 -224 288 212 68 68 chr2 29790446 29790578 -223466005 - L1ME4a LINE L1 -44 6077 5946 2238 149 48 86 chr2 29790584 29791059 -223465524 + LTR32 LTR ERVL 15 471 0 2242 94 3 0 chr2 29791146 29791444 -223465139 - AluSx SINE Alu -13 299 1 391 302 71 0 chr2 29792016 29792142 -223464441 - MIR SINE MIR 0 262 128 1118 175 0 0 chr2 29792245 29792416 -223464167 + FAM SINE Alu 2 172 -3 399 277 0 10 chr2 29792453 29792554 -223464029 - HsTC2 DNA Tc2 -1798 100 1 1824 169 0 7 chr2 29793279 29793586 -223462997 - AluJb SINE Alu -7 305 1 4543 104 38 26 chr2 29793619 29793807 -223462776 - L1PB1 LINE L1 -1 6150 5966 2458 54 0 0 chr2 29793807 29794103 -223462480 - AluY SINE Alu -15 296 1 4543 104 38 26 chr2 29794103 29794279 -223462304 - L1PB1 LINE L1 -185 5966 5794 324 0 0 0 chr2 29794279 29794315 -223462268 + (TG)n Simple_repeat Simple_repeat 2 37 0 186 43 0 0 chr2 29794315 29794338 -223462245 + (CATA)n Simple_repeat Simple_repeat 2 24 0 4543 104 38 26 chr2 29794338 29794665 -223461918 - L1PB1 LINE L1 -356 5795 5449 336 303 158 30 chr2 29794667 29794964 -223461619 + L2 LINE L2 2376 2710 -604 257 300 20 47 chr2 29794965 29795115 -223461468 + L1MC/D LINE L1 5370 5515 -2270 349 264 106 65 chr2 29795488 29795864 -223460719 + L2 LINE L2 2696 3079 -234 1184 154 41 9 chr2 29795877 29796097 -223460486 - AluJo SINE Alu -85 227 1 337 269 54 15 chr2 29796100 29796230 -223460353 + L2 LINE L2 3117 3251 -62 291 272 11 22 chr2 29797228 29797320 -223459263 + L2 LINE L2 3176 3266 -47 219 271 29 14 chr2 29797670 29797740 -223458843 + L2 LINE L2 3197 3267 -5 181 175 25 0 chr2 29797984 29798024 -223458559 - MER5A DNA MER1_type -114 75 35 307 219 85 0 chr2 29798087 29798169 -223458414 - MIR SINE MIR -66 196 108 650 188 8 16 chr2 29798250 29798378 -223458205 - MIR SINE MIR -37 225 99 236 245 0 53 chr2 29799088 29799182 -223457401 + CT-rich Low_complexity Low_complexity 2 90 0 234 293 13 0 chr2 29801054 29801129 -223455454 + (CA)n Simple_repeat Simple_repeat 1 76 0 329 321 43 33 chr2 29802054 29802238 -223454345 - MIR3 SINE MIR -6 202 17 2235 115 0 0 chr2 29802366 29802678 -223453905 + AluSx SINE Alu 1 312 0 2078 175 142 16 chr2 29803189 29803675 -223452908 + LTR10B LTR ERV1 1 547 0 195 261 62 0 chr2 29804045 29804110 -223452473 + MIR SINE MIR 83 151 -57 2133 106 41 3 chr2 29804110 29804403 -223452180 + AluSx SINE Alu 1 304 -8 530 263 94 19 chr2 29804458 29804724 -223451859 + MER113 DNA MER1_type? 30 315 -206 659 104 85 9 chr2 29804725 29804831 -223451752 + MSTA LTR MaLR 264 377 -51 367 227 85 14 chr2 29804788 29804929 -223451654 + MER113 DNA MER1_type? 261 411 -110 * 1623 185 0 52 chr2 29805870 29806199 -223450384 + AluJo SINE Alu 1 312 0 720 275 148 27 chr2 29806463 29807000 -223449583 - L2 LINE L2 0 3313 2709 367 208 40 64 chr2 29807037 29807162 -223449421 - L1MD3 LINE L1 -10 7985 7864 1925 279 73 18 chr2 29807162 29808011 -223448572 - L2 LINE L2 -599 2715 1820 220 323 0 0 chr2 29808039 29808101 -223448482 - L2 LINE L2 -1606 1708 1647 506 294 26 0 chr2 29808113 29808307 -223448276 - L2 LINE L2 -2363 951 753 200 213 80 40 chr2 29809613 29809688 -223446895 - MIR3 SINE MIR -17 191 114 2126 168 40 89 chr2 29809688 29810271 -223446312 + MLT2B3 LTR ERVL 1 554 0 216 293 85 0 chr2 29811938 29812020 -223444563 + MIR3 SINE MIR 117 205 -3 552 238 24 8 chr2 29812753 29812879 -223443704 - L2 LINE L2 0 3313 3186 252 0 0 0 chr2 29813525 29813553 -223443030 + (CA)n Simple_repeat Simple_repeat 2 29 0 207 286 0 0 chr2 29814532 29814581 -223442002 + L2 LINE L2 3264 3312 -1 2134 132 0 0 chr2 29814825 29815114 -223441469 + AluSx SINE Alu 1 289 -23 2200 145 0 0 chr2 29815131 29815486 -223441097 + AluSx SINE Alu 1 355 0 770 193 12 0 chr2 29817072 29817400 -223439183 + (CA)n Simple_repeat Simple_repeat 1 332 0 486 173 13 36 chr2 29817446 29817696 -223438887 + (CA)n Simple_repeat Simple_repeat 1 244 0 439 247 6 6 chr2 29817717 29817887 -223438696 + (CA)n Simple_repeat Simple_repeat 2 171 0 439 195 16 43 chr2 29817929 29818114 -223438469 + (CA)n Simple_repeat Simple_repeat 1 180 0 200 250 12 0 chr2 29818132 29818212 -223438371 + (CA)n Simple_repeat Simple_repeat 1 81 0 762 216 11 1 chr2 29818230 29819024 -223437559 + (CA)n Simple_repeat Simple_repeat 1 801 0 916 94 8 8 chr2 29819301 29819428 -223437155 + AluSq/x SINE Alu 1 127 -186 296 235 59 0 chr2 29819539 29819607 -223436976 - MIR SINE MIR -190 72 1 2144 152 192 23 chr2 29819940 29820460 -223436123 - LTR18B LTR ERVL -6 608 1 322 183 215 0 chr2 29821935 29822028 -223434555 + MER81 DNA DNA 1 113 -1 300 164 78 0 chr2 29822360 29822488 -223434095 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 1155 151 78 0 chr2 29823115 29823334 -223433249 + MER46A DNA MER2_type 1 236 0 309 269 37 11 chr2 29823358 29823467 -223433116 - MER91 DNA MER1_type 0 190 86 238 284 154 24 chr2 29824081 29824250 -223432333 - MIR SINE MIR -70 192 2 2074 109 75 31 chr2 29825449 29825798 -223430785 - THE1B LTR MaLR 0 364 1 2244 157 70 11 chr2 29825812 29826133 -223430450 - L1MB3 LINE L1 -7 6176 5817 1979 163 0 13 chr2 29826133 29826309 -223430274 - AluSx SINE Alu -3 309 137 2236 91 0 53 chr2 29826309 29826628 -223429955 - AluSg SINE Alu -8 302 1 1979 163 0 13 chr2 29826628 29826764 -223429819 - AluSx SINE Alu -175 137 1 2244 157 70 11 chr2 29826764 29826914 -223429669 - L1MB3 LINE L1 -366 5817 5677 1852 156 7 20 chr2 29827545 29827847 -223428736 + AluJb SINE Alu 11 308 -4 327 288 110 18 chr2 29828715 29828878 -223427705 - MIR SINE MIR -49 213 36 636 258 138 5 chr2 29828904 29829121 -223427462 + ORSL DNA AcHobo 9 254 -21 3237 129 46 55 chr2 29831818 29832317 -223424266 - LTR36 LTR ERV1 0 611 109 198 118 0 0 chr2 29832317 29832351 -223424232 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3607 21 5 0 chr2 29832351 29832785 -223423798 - L1PA5 LINE L1 -16 6138 5703 3237 129 46 55 chr2 29832785 29832898 -223423685 - LTR36 LTR ERV1 -500 111 4 4953 77 3 1 chr2 29833012 29833671 -223422912 + PABL_A LTR ERV1 1 660 0 549 277 6 40 chr2 29833730 29833907 -223422676 - MER5B DNA MER1_type -5 173 3 229 348 44 33 chr2 29834018 29834199 -223422384 + MIR SINE MIR 41 223 -39 200 304 63 0 chr2 29834581 29834660 -223421923 - MIR SINE MIR -79 183 100 436 206 199 22 chr2 29834673 29834809 -223421774 - MER5A DNA MER1_type -21 168 9 925 162 56 15 chr2 29835104 29835302 -223421281 - MER89 LTR ERV1 0 559 354 278 254 15 15 chr2 29835331 29835398 -223421185 + MER5A DNA MER1_type 39 105 -84 212 323 172 0 chr2 29835577 29835670 -223420913 + MER5A DNA MER1_type 55 163 -26 504 0 0 0 chr2 29836359 29836415 -223420168 + (TG)n Simple_repeat Simple_repeat 1 56 0 1804 141 3 58 chr2 29836560 29836873 -223419710 + AluJo SINE Alu 1 296 -16 245 317 154 0 chr2 29837697 29837801 -223418782 - MIR SINE MIR -109 153 34 208 227 23 0 chr2 29837866 29837910 -223418673 + CT-rich Low_complexity Low_complexity 1 45 0 291 305 40 68 chr2 29841819 29841996 -223414587 + MIR SINE MIR 20 191 -71 311 284 125 82 chr2 29843244 29843339 -223413244 + MIR SINE MIR 34 123 -139 2401 97 0 3 chr2 29843339 29843647 -223412936 + AluSq SINE Alu 1 307 -6 311 284 125 82 chr2 29843647 29843759 -223412824 + MIR SINE MIR 123 250 -12 2139 137 0 10 chr2 29845020 29845320 -223411263 - AluSx SINE Alu -15 297 1 724 224 14 0 chr2 29846391 29846534 -223410049 + Charlie1 DNA MER1_type 2 146 -2615 763 256 0 9 chr2 29846656 29846871 -223409712 + AluY SINE Alu 99 311 0 339 279 85 4 chr2 29847585 29847727 -223408856 + MIR SINE MIR 16 165 -63 571 271 135 14 chr2 29847948 29848155 -223408428 - MIR SINE MIR 0 262 31 1380 192 133 3 chr2 29848276 29848599 -223407984 - MLT1A1 LTR MaLR 0 365 1 2028 125 13 35 chr2 29849705 29850016 -223406567 + AluJb SINE Alu 1 304 -8 274 236 19 123 chr2 29850222 29850285 -223406298 + MER81 DNA DNA 20 69 -45 2079 112 32 35 chr2 29850285 29850599 -223405984 + AluSq SINE Alu 1 313 0 274 236 19 123 chr2 29850599 29850641 -223405942 + MER81 DNA DNA 69 114 0 427 339 22 6 chr2 29850667 29850850 -223405733 + MIR SINE MIR 76 261 -1 376 208 182 0 chr2 29850980 29851139 -223405444 - MER53 DNA DNA -1 188 1 2303 95 27 0 chr2 29851376 29851670 -223404913 + AluSx SINE Alu 3 304 -8 2026 165 51 43 chr2 29852585 29852966 -223403617 + MLT2A2 LTR ERVL 1 395 -159 2135 108 22 38 chr2 29852966 29853281 -223403302 - AluSx SINE Alu 0 312 3 2026 165 51 43 chr2 29853281 29853443 -223403140 + MLT2A2 LTR ERVL 395 554 0 180 227 0 0 chr2 29853524 29853568 -223403015 + L2 LINE L2 2919 2962 -310 188 372 51 26 chr2 29853704 29853782 -223402801 + L2 LINE L2 3138 3217 -55 511 156 227 0 chr2 29853810 29853938 -223402645 + L1MC2 LINE L1 6186 6342 -2 1001 112 0 14 chr2 29854062 29854205 -223402378 + AluJb SINE Alu 1 141 -171 27 62 0 0 chr2 29854221 29854269 -223402314 + AT_rich Low_complexity Low_complexity 1 48 0 4610 182 51 8 chr2 29854269 29856076 -223400507 + L1MC2 LINE L1 4318 6194 -150 201 74 0 0 chr2 29857547 29857574 -223399009 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1847 85 0 4 chr2 29857603 29857838 -223398745 - AluSg/x SINE Alu -9 301 68 460 285 98 8 chr2 29858531 29858766 -223397817 - LTR33 LTR ERVL -58 463 208 3640 165 27 27 chr2 29858789 29859321 -223397262 + MER50 LTR ERV1 1 532 -202 17869 27 4 0 chr2 29859321 29862231 -223394352 - L1PA3 LINE L1 0 6155 3238 3640 165 27 27 chr2 29862231 29862260 -223394323 + MER50 LTR ERV1 532 560 -174 1904 115 50 0 chr2 29862260 29862538 -223394045 - AluY SINE Alu -19 292 1 3640 165 27 27 chr2 29862538 29862709 -223393874 + MER50 LTR ERV1 559 734 0 2105 120 0 3 chr2 29863739 29864022 -223392561 + AluSx SINE Alu 1 282 -30 273 119 0 0 chr2 29864022 29864064 -223392519 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 814 149 43 7 chr2 29864064 29864205 -223392378 + MLT1B LTR MaLR 245 390 0 1967 135 11 0 chr2 29864371 29864653 -223391930 - AluSx SINE Alu -27 285 1 243 143 24 0 chr2 29864655 29864697 -223391886 - L2 LINE L2 -1102 2212 2170 416 256 110 26 chr2 29864752 29864943 -223391640 - L1M4 LINE L1 -519 6361 6155 687 245 66 25 chr2 29864946 29865142 -223391441 - MER63A DNA MER1_type 0 210 7 593 289 81 49 chr2 29865177 29866323 -223390260 - L1M4 LINE L1 -747 6101 4933 348 328 82 15 chr2 29866708 29866842 -223389741 + MIR SINE MIR 7 149 -113 657 303 219 21 chr2 29867760 29868271 -223388312 + L3 LINE CR1 913 1524 -53 193 259 103 0 chr2 29868358 29868416 -223388167 - L2 LINE L2 -13 3259 3196 423 276 118 96 chr2 29868823 29869675 -223386908 - L1M4 LINE L1 -5655 1194 485 522 204 29 102 chr2 29870835 29870997 -223385586 + MER3 DNA MER1_type 1 146 -63 1904 123 43 17 chr2 29870997 29871298 -223385285 - AluSq SINE Alu -4 309 1 522 204 29 102 chr2 29871298 29871341 -223385242 + MER3 DNA MER1_type 146 191 -18 301 341 166 33 chr2 29871374 29871585 -223384998 + L2 LINE L2 3034 3272 0 2167 109 0 7 chr2 29872184 29872486 -223384097 - AluSq SINE Alu -12 301 2 23 0 0 0 chr2 29872492 29872515 -223384068 + AT_rich Low_complexity Low_complexity 1 23 0 296 369 48 60 chr2 29873429 29873697 -223382886 + L2 LINE L2 2996 3260 -12 1491 104 10 0 chr2 29876313 29876515 -223380068 + AluSg/x SINE Alu 103 306 -6 701 368 105 3 chr2 29876581 29876972 -223379611 - L3 LINE CR1 -67 1510 1080 588 267 191 36 chr2 29876972 29877434 -223379149 - L2 LINE L2 -3 3310 2778 1210 241 48 16 chr2 29877630 29878008 -223378575 - L1MEc LINE L1 -4481 1915 1526 2116 211 122 12 chr2 29878039 29878816 -223377767 - L1MEc LINE L1 -4924 1472 610 227 114 0 0 chr2 29878874 29878909 -223377674 + Charlie3 DNA MER1_type 2678 2712 0 396 254 210 31 chr2 29878910 29879134 -223377449 - L1MEc LINE L1 -5806 590 327 228 234 56 56 chr2 29879142 29879249 -223377334 + MSR1 Satellite Satellite 4 110 -1 657 280 28 40 chr2 29879250 29879500 -223377083 - L1MEc LINE L1 -6110 286 40 2209 102 0 32 chr2 29879557 29879872 -223376711 + AluSx SINE Alu 1 305 -7 939 273 32 0 chr2 29879979 29880232 -223376351 + MIR SINE MIR 2 262 0 649 224 45 91 chr2 29880246 29880598 -223375985 - LOR1-int LTR ERV1 -258 4678 4343 295 145 211 13 chr2 29880604 29880680 -223375903 - LTR37A LTR ERV1 -332 94 4 565 146 48 0 chr2 29880687 29880790 -223375793 - LOR1-int LTR ERV1 -691 4245 4138 3500 181 86 97 chr2 29880839 29882256 -223374327 - LOR1-int LTR ERV1 -1066 3870 2469 309 282 87 0 chr2 29882243 29882346 -223374237 - LOR1-int LTR ERV1 -3936 4184 4073 * 774 215 51 69 chr2 29882861 29882909 -223373674 - LOR1-int LTR ERV1 -3211 3120 3073 437 211 62 118 chr2 29882909 29883231 -223373352 - LTR57-int LTR ERVL -4246 1097 794 774 215 51 69 chr2 29883231 29883287 -223373296 - LOR1-int LTR ERV1 -3258 3073 1236 367 227 0 11 chr2 29883972 29884060 -223372523 - MER95 LTR ERV -76 355 269 555 248 154 16 chr2 29884569 29884770 -223371813 + MIR SINE MIR 4 231 -31 21 89 0 0 chr2 29884847 29884903 -223371680 + AT_rich Low_complexity Low_complexity 1 56 0 391 231 126 7 chr2 29886412 29886555 -223370028 - MER5C DNA MER1_type -2 322 163 1655 215 7 0 chr2 29886570 29886872 -223369711 + AluJo SINE Alu 1 304 -8 332 225 102 75 chr2 29887012 29887199 -223369384 - L1ME LINE L1 -302 5819 5628 23 0 0 0 chr2 29887836 29887859 -223368724 + AT_rich Low_complexity Low_complexity 1 23 0 1053 198 35 0 chr2 29888635 29888837 -223367746 - MER58A DNA MER1_type -15 209 1 221 304 99 89 chr2 29890133 29890426 -223366157 - L2 LINE L2 -52 3220 2925 8937 174 41 16 chr2 29890688 29893713 -223362870 - L1PA16 LINE L1 -7 6862 3770 28 0 0 0 chr2 29893713 29893741 -223362842 + AT_rich Low_complexity Low_complexity 1 28 0 6622 35 1 0 chr2 29893741 29894568 -223362015 - L1PA3 LINE L1 0 6155 5328 3002 242 40 13 chr2 29894539 29895640 -223360943 - L1PA16 LINE L1 -3037 3812 2684 * 912 219 0 0 chr2 29895661 29895862 -223360721 - L1PA16 LINE L1 -3996 2853 2653 874 251 46 80 chr2 29896860 29897271 -223359312 + L2 LINE L2 2917 3313 0 1169 62 0 38 chr2 29898198 29898358 -223358225 - L1PA7 LINE L1 0 6154 6001 1104 153 18 0 chr2 29898466 29898636 -223357947 - FRAM SINE Alu -8 168 1 234 286 12 0 chr2 29898639 29898723 -223357860 - L1M4 LINE L1 -3705 2441 2357 335 299 104 10 chr2 29899142 29899343 -223357240 - L2 LINE L2 -1579 1735 1516 2177 111 0 0 chr2 29899351 29899648 -223356935 - AluSx SINE Alu -15 297 1 651 286 104 14 chr2 29900344 29900564 -223356019 + MIR SINE MIR 11 250 -12 385 219 80 60 chr2 29900807 29900958 -223355625 - L1MC/D LINE L1 -2333 5475 5322 1227 141 70 0 chr2 29901241 29901482 -223355101 - L1MA5 LINE L1 -3 6297 6040 551 267 23 47 chr2 29902159 29902417 -223354166 - HAL1 LINE L1 -12 2495 2244 575 246 35 10 chr2 29902480 29902683 -223353900 - HAL1 LINE L1 -768 1739 1532 777 274 14 18 chr2 29902688 29902907 -223353676 - MER58A DNA MER1_type -1 223 6 273 276 60 37 chr2 29903064 29903198 -223353385 - HAL1 LINE L1 -2369 138 2 1502 113 17 13 chr2 29903507 29903738 -223352845 + L1PA13 LINE L1 5928 6159 -4 921 197 94 0 chr2 29903748 29903951 -223352632 + Charlie1 DNA MER1_type 2536 2757 -4 191 167 189 87 chr2 29903994 29904104 -223352479 + MIR3 SINE MIR 35 157 -51 1248 91 26 108 chr2 29904133 29904365 -223352218 - L1PA7 LINE L1 -2 6152 5940 394 294 81 6 chr2 29909431 29909591 -223346992 + MIR SINE MIR 41 212 -50 1652 171 16 26 chr2 29909625 29909935 -223346648 + AluJb SINE Alu 1 307 -5 323 178 22 67 chr2 29910206 29910296 -223346287 - L1ME LINE L1 -346 5775 5690 2009 228 76 18 chr2 29911019 29911586 -223344997 + L1ME2 LINE L1 5541 6140 -24 192 40 0 0 chr2 29911599 29911624 -223344959 + (CA)n Simple_repeat Simple_repeat 2 26 0 2026 184 180 24 chr2 29911711 29912162 -223344421 - MLT1F1 LTR MaLR -2 565 45 603 274 137 44 chr2 29913131 29913474 -223343109 - MLT1J1 LTR MaLR -10 436 62 6798 189 164 26 chr2 29913880 29915422 -223341161 - MER52A LTR ERV1 0 1755 1 1001 243 46 57 chr2 29916382 29916461 -223340122 - L1ME1 LINE L1 -6 6160 6082 1864 131 96 10 chr2 29916461 29916775 -223339808 - MER61A LTR ERV1 -2 341 1 1001 243 46 57 chr2 29916775 29916938 -223339645 - L1ME1 LINE L1 -84 6082 5921 1626 196 32 0 chr2 29916938 29917219 -223339364 - AluJo SINE Alu -18 294 5 1001 243 46 57 chr2 29917219 29917346 -223339237 - L1ME1 LINE L1 -245 5921 5794 2039 137 0 3 chr2 29917359 29917651 -223338932 - AluSx SINE Alu -15 297 7 2420 70 3 0 chr2 29918051 29918349 -223338234 + AluY SINE Alu 1 299 -12 2611 157 45 21 chr2 29918536 29919019 -223337564 + L1MB5 LINE L1 5672 6166 -8 768 225 98 46 chr2 29919146 29919627 -223336956 - L1ME4a LINE L1 -9 7776 5557 302 60 100 0 chr2 29919627 29919677 -223336906 - MLT2A1 LTR ERVL 0 444 390 514 64 90 14 chr2 29919682 29920114 -223336469 + (TA)n Simple_repeat Simple_repeat 1 464 0 2230 93 3 0 chr2 29920114 29920405 -223336178 - MLT2A1 LTR ERVL -152 292 1 393 83 0 83 chr2 29920405 29920477 -223336106 - L1MC3 LINE L1 -200 7585 7520 30 27 0 0 chr2 29920520 29920557 -223336026 + AT_rich Low_complexity Low_complexity 1 37 0 229 162 40 54 chr2 29920558 29920609 -223335974 - L1MC4 LINE L1 -1339 6703 6652 2004 146 0 0 chr2 29920609 29920896 -223335687 - AluJb SINE Alu -23 289 3 229 162 40 54 chr2 29920896 29920918 -223335665 - L1MC4 LINE L1 -1390 6652 6631 * 1092 146 75 5 chr2 29920898 29921110 -223335473 - L1MC3 LINE L1 -252 7533 7307 2022 116 44 47 chr2 29921210 29921308 -223335275 - L1MA9 LINE L1 -257 6055 5958 2186 120 0 17 chr2 29921308 29921608 -223334975 - AluSx SINE Alu -17 295 1 2022 116 44 47 chr2 29921608 29921870 -223334713 - L1MA9 LINE L1 -354 5958 5696 673 154 146 0 chr2 29921880 29922003 -223334580 - FLAM_C SINE Alu -1 142 2 2827 158 27 14 chr2 29922005 29922822 -223333761 - L1MA9 LINE L1 -617 5674 4847 * 3402 128 23 7 chr2 29922815 29923372 -223333211 + L1MA9 LINE L1 4268 4833 -1313 1709 178 0 0 chr2 29923595 29923865 -223332718 + AluJb SINE Alu 24 293 -19 260 326 32 11 chr2 29924122 29924217 -223332366 - MER5B DNA MER1_type -6 172 76 2058 139 7 0 chr2 29924239 29924541 -223332042 - AluSx SINE Alu -8 304 1 1712 105 13 0 chr2 29924692 29924931 -223331652 + L1MA5A LINE L1 6041 6282 -15 21 0 0 0 chr2 29924931 29924952 -223331631 + AT_rich Low_complexity Low_complexity 1 21 0 1216 232 79 64 chr2 29925183 29925720 -223330863 + L1MC5 LINE L1 7316 7865 -96 3441 152 41 11 chr2 29925720 29926254 -223330329 + MER44D DNA MER2_type 1 605 0 1216 232 79 64 chr2 29926254 29926323 -223330260 + L1MC5 LINE L1 7865 7931 -30 501 250 0 9 chr2 29926325 29926437 -223330146 + L2 LINE L2 3200 3310 -3 1092 174 0 0 chr2 29926468 29926635 -223329948 + FAM SINE Alu 1 167 -8 2352 96 0 10 chr2 29926645 29926959 -223329624 + AluY SINE Alu 1 311 0 1868 98 113 0 chr2 29927970 29928244 -223328339 - AluSx SINE Alu -7 305 1 235 250 36 45 chr2 29928363 29928475 -223328108 - L1ME LINE L1 -392 5729 5619 24 32 0 0 chr2 29928562 29928593 -223327990 + AT_rich Low_complexity Low_complexity 1 31 0 238 277 72 0 chr2 29928620 29928703 -223327880 - L1M2 LINE L1 -714 5577 5489 211 237 0 0 chr2 29929828 29929866 -223326717 + L2 LINE L2 3149 3186 -86 671 310 35 31 chr2 29931071 29931523 -223325060 - L1ME LINE L1 -1321 4825 4372 455 303 22 80 chr2 29932128 29932442 -223324141 + L1MDb LINE L1 775 1070 -5339 1061 159 6 0 chr2 29932474 29932637 -223323946 + FRAM SINE Alu 1 162 -14 355 109 47 0 chr2 29932650 29932714 -223323869 + L1MDb LINE L1 1112 1178 -5231 751 207 22 56 chr2 29932727 29932906 -223323677 + L1MD2 LINE L1 6136 6308 -51 192 294 99 59 chr2 29933033 29933305 -223323278 + L2 LINE L2 2599 2881 -433 686 290 123 25 chr2 29934909 29935268 -223321315 - L3 LINE CR1 -850 727 334 813 210 6 6 chr2 29936090 29936252 -223320331 - FRAM SINE Alu -14 162 1 183 135 54 0 chr2 29936615 29936652 -223319931 - L3 LINE CR1 -286 1291 1253 927 156 0 15 chr2 29936882 29937017 -223319566 + FLAM_C SINE Alu 1 133 0 1144 225 4 22 chr2 29937107 29937334 -223319249 + MER58A DNA MER1_type 2 224 0 2388 80 3 0 chr2 29938292 29938591 -223317992 - AluSp SINE Alu -13 300 1 1894 207 25 53 chr2 29938767 29939241 -223317342 - LTR40b LTR ERVL -1 461 1 222 360 124 19 chr2 29940410 29940571 -223316012 - L3b LINE CR1 -55 1528 1351 259 134 63 24 chr2 29942240 29942367 -223314216 + (CA)n Simple_repeat Simple_repeat 2 133 0 21 57 0 0 chr2 29943000 29943035 -223313548 + AT_rich Low_complexity Low_complexity 1 35 0 816 240 55 28 chr2 29943924 29944357 -223312226 - L1ME LINE L1 -620 5550 5093 2542 65 3 0 chr2 29944357 29944663 -223311920 - AluY SINE Alu -4 307 1 816 240 55 28 chr2 29944663 29944835 -223311748 - L1ME LINE L1 -1077 5093 4927 237 148 49 49 chr2 29944840 29944901 -223311682 - L1 LINE L1 -3354 2792 2732 * 3971 208 35 41 chr2 29944898 29944975 -223311608 - L1MC/D LINE L1 -782 5347 5271 1973 145 51 61 chr2 29944975 29945174 -223311409 - MLT1B LTR MaLR 0 390 195 360 0 0 0 chr2 29945174 29945214 -223311369 + (TG)n Simple_repeat Simple_repeat 2 41 0 1973 145 51 61 chr2 29945214 29945408 -223311175 - MLT1B LTR MaLR -195 195 1 3971 208 35 41 chr2 29945408 29945447 -223311136 - L1MC/D LINE L1 -858 5271 5233 4626 133 21 25 chr2 29945447 29946215 -223310368 - L1MA4 LINE L1 0 6300 5536 3971 208 35 41 chr2 29946215 29947218 -223309365 - L1MC/D LINE L1 -896 5233 4349 460 266 32 40 chr2 29947241 29947353 -223309230 - L1MC/D LINE L1 -3819 2310 2199 2539 66 0 0 chr2 29947353 29947656 -223308927 - AluY SINE Alu -8 303 1 460 266 32 40 chr2 29947656 29947830 -223308753 - L1MC/D LINE L1 -3930 2199 2065 308 246 210 12 chr2 29948167 29948334 -223308249 - L1MC/D LINE L1 -4549 1580 1381 1069 300 133 29 chr2 29948410 29949306 -223307277 - L1MC/D LINE L1 -4864 1255 267 816 153 8 15 chr2 29949953 29950084 -223306499 - FLAM_C SINE Alu -8 135 6 2553 68 0 7 chr2 29951588 29951898 -223304685 - AluY SINE Alu -3 308 1 2006 138 3 10 chr2 29952964 29953268 -223303315 + AluSc SINE Alu 1 302 -7 1110 133 13 0 chr2 29953268 29953426 -223303157 + AluSg/x SINE Alu 132 291 -19 241 284 15 0 chr2 29953632 29953699 -223302884 + L2 LINE L2 3245 3312 -1 305 262 120 45 chr2 29953868 29954019 -223302564 - L1ME4a LINE L1 -4 6117 5979 2210 117 3 3 chr2 29954019 29954317 -223302266 - AluSq SINE Alu -15 298 1 305 262 120 45 chr2 29954317 29954446 -223302137 - L1ME4a LINE L1 -142 5979 5811 1927 146 7 0 chr2 29954636 29954931 -223301652 - AluSx SINE Alu -15 297 1 402 339 80 5 chr2 29955282 29955506 -223301077 + MIR SINE MIR 21 261 -1 235 302 127 16 chr2 29955720 29955846 -223300737 + MIR SINE MIR 53 192 -70 21 71 0 0 chr2 29956465 29956507 -223300076 + AT_rich Low_complexity Low_complexity 1 42 0 237 211 0 0 chr2 29956667 29956719 -223299864 + (TATG)n Simple_repeat Simple_repeat 1 52 0 2164 154 53 53 chr2 29956801 29957235 -223299348 - Tigger2a DNA MER2_type 0 434 1 327 319 90 30 chr2 29958281 29958447 -223298136 - MIR3 SINE MIR -17 191 16 420 272 114 16 chr2 29960113 29960297 -223296286 + L2 LINE L2 3111 3312 -1 2213 104 0 3 chr2 29960721 29961010 -223295573 - AluSx SINE Alu -24 288 1 2760 96 3 3 chr2 29963401 29963764 -223292819 + THE1B LTR MaLR 2 364 0 1715 87 0 5 chr2 29964310 29964528 -223292055 - AluSg SINE Alu -31 279 63 1437 140 40 0 chr2 29965845 29966095 -223290488 + L1MA6 LINE L1 6041 6300 0 278 275 55 18 chr2 29969787 29969896 -223286687 - MIR3 SINE MIR 0 208 96 23 54 0 0 chr2 29970057 29970094 -223286489 + AT_rich Low_complexity Low_complexity 1 37 0 1709 110 10 63 chr2 29970337 29970636 -223285947 - AluSx SINE Alu -11 301 19 1729 125 8 12 chr2 29971318 29971574 -223285009 + AluSx SINE Alu 32 286 -26 195 170 0 0 chr2 29973549 29973596 -223282987 + (CA)n Simple_repeat Simple_repeat 2 48 0 307 272 166 26 chr2 29973759 29974024 -223282559 - L1ME4a LINE L1 -201 5920 5619 565 248 89 30 chr2 29974060 29974330 -223282253 + L2 LINE L2 2262 2547 -767 341 328 109 55 chr2 29974387 29974793 -223281790 - L1ME4a LINE L1 -485 5636 5164 2236 114 10 0 chr2 29974793 29975090 -223281493 - AluSx SINE Alu -12 300 1 341 328 109 55 chr2 29975090 29975391 -223281192 - L1ME4a LINE L1 -957 5164 4881 190 231 0 0 chr2 29975822 29975861 -223280722 - MIR SINE MIR -111 151 113 689 188 118 6 chr2 29976261 29976431 -223280152 + MER53 DNA DNA 1 189 0 247 221 0 63 chr2 29976567 29976662 -223279921 - L1MC4 LINE L1 -1339 6703 6615 * 269 267 0 0 chr2 29976611 29976701 -223279882 + L1MC4 LINE L1 6614 6703 -1339 1234 285 77 44 chr2 29977008 29977342 -223279241 + L2 LINE L2 2200 2521 -792 2128 119 17 0 chr2 29977342 29977635 -223278948 + AluSx SINE Alu 1 298 -14 1234 285 77 44 chr2 29977635 29978171 -223278412 + L2 LINE L2 2521 3106 -207 270 252 46 93 chr2 29978434 29978800 -223277783 - L1MB7 LINE L1 -243 5941 5600 672 182 208 0 chr2 29978854 29979008 -223277575 - MER5A DNA MER1_type -3 186 1 867 236 83 77 chr2 29979161 29979321 -223277262 - HAL1 LINE L1 -960 1547 1389 2256 74 40 3 chr2 29979321 29979618 -223276965 - AluSg1 SINE Alu -1 308 1 867 236 83 77 chr2 29979618 29979949 -223276634 - HAL1 LINE L1 -1118 1389 1053 * 2999 172 42 63 chr2 29979923 29980438 -223276145 - L1MC3 LINE L1 0 7785 7287 2096 123 3 0 chr2 29980438 29980723 -223275860 - AluSq SINE Alu -27 286 1 2999 172 42 63 chr2 29980723 29980900 -223275683 - L1MC3 LINE L1 -498 7287 7108 625 249 102 18 chr2 29980952 29981177 -223275406 - HAL1 LINE L1 -1476 1031 788 1655 226 74 19 chr2 29981223 29981252 -223275331 - MLT1D LTR MaLR -5 500 474 192 40 0 0 chr2 29981252 29981277 -223275306 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 1655 226 74 19 chr2 29981277 29981721 -223274862 - MLT1D LTR MaLR -31 474 1 258 311 48 42 chr2 29981846 29982013 -223274570 - HAL1 LINE L1 -2022 485 318 327 195 49 0 chr2 29982016 29982139 -223274444 + CT-rich Low_complexity Low_complexity 2 130 0 1654 175 0 0 chr2 29982142 29982405 -223274178 - AluJo SINE Alu -49 263 1 354 273 58 32 chr2 29982419 29982573 -223274010 - HAL1 LINE L1 -2220 287 130 264 59 0 0 chr2 29982610 29982644 -223273939 + (TG)n Simple_repeat Simple_repeat 2 35 0 848 198 39 11 chr2 29982688 29982870 -223273713 + MER5A DNA MER1_type 3 189 0 240 376 112 0 chr2 29983829 29983954 -223272629 - L2 LINE L2 0 3272 3134 23 0 0 0 chr2 29984747 29984770 -223271813 + AT_rich Low_complexity Low_complexity 1 23 0 2346 79 13 10 chr2 29985092 29985395 -223271188 + AluSp SINE Alu 1 304 -9 374 241 107 27 chr2 29985970 29986082 -223270501 - MIR SINE MIR -6 256 136 2068 98 0 4 chr2 29986264 29986528 -223270055 - AluSx SINE Alu -14 298 36 24 0 0 0 chr2 29986528 29986552 -223270031 + AT_rich Low_complexity Low_complexity 1 24 0 2132 99 10 0 chr2 29988526 29988818 -223267765 - AluSp SINE Alu -2 311 17 765 188 0 0 chr2 29989532 29989670 -223266913 + FLAM_C SINE Alu 2 139 -4 379 175 133 70 chr2 29990045 29990188 -223266395 + MER5B DNA MER1_type 22 173 -5 201 288 0 15 chr2 29990740 29990806 -223265777 + L2 LINE L2 3205 3269 -3 331 224 12 12 chr2 29991335 29991420 -223265163 - MIR SINE MIR -115 147 63 386 161 65 0 chr2 29992430 29992585 -223263998 + (TG)n Simple_repeat Simple_repeat 1 165 0 287 154 58 10 chr2 29992605 29992709 -223263874 + (TG)n Simple_repeat Simple_repeat 1 109 0 1229 167 47 33 chr2 29992848 29993124 -223263459 + AluSc SINE Alu 1 280 -19 310 307 166 10 chr2 29993512 29993717 -223262866 + MIR SINE MIR 5 241 -21 183 80 0 0 chr2 29993761 29993786 -223262797 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 537 255 45 44 chr2 29993803 29994057 -223262526 + MIR SINE MIR 8 262 0 587 227 33 20 chr2 29995458 29995608 -223260975 + MER103 DNA DNA 2 153 -13 512 194 37 0 chr2 29995742 29995850 -223260733 + MIR SINE MIR 80 191 -71 258 278 91 31 chr2 29996572 29996715 -223259868 + MIR3 SINE MIR 51 201 -7 207 162 0 0 chr2 29996960 29996997 -223259586 + (TTA)n Simple_repeat Simple_repeat 3 39 0 192 384 0 0 chr2 29997237 29997310 -223259273 - L2 LINE L2 -7 3265 3193 949 201 30 35 chr2 29998018 29998217 -223258366 - MER20 DNA MER1_type 0 219 22 408 275 42 0 chr2 29998311 29998431 -223258152 - L2 LINE L2 -4 3309 3185 2336 244 92 22 chr2 29998494 29999327 -223257256 - L2 LINE L2 -419 2895 2004 313 296 10 0 chr2 29999435 29999533 -223257050 + L2 LINE L2 3170 3268 -4 182 333 50 0 chr2 29999727 29999826 -223256757 - MIR SINE MIR -56 152 49 716 146 73 8 chr2 29999831 29999954 -223256629 + FLAM_C SINE Alu 2 132 -1 1464 201 0 52 chr2 29999964 30000273 -223256310 + AluJo SINE Alu 1 293 -19 1233 91 0 0 chr2 30000959 30001113 -223255470 + AluSx SINE Alu 1 154 -158 1378 215 36 4 chr2 30002231 30002510 -223254073 + AluJb SINE Alu 1 288 -24 243 290 80 6 chr2 30002510 30002672 -223253911 + L1ME4a LINE L1 5156 5329 -817 2077 128 34 0 chr2 30002736 30003033 -223253550 + AluSx SINE Alu 1 307 -5 1379 239 151 25 chr2 30003026 30003625 -223252958 + L1ME4a LINE L1 5384 6056 -65 213 39 0 0 chr2 30003814 30003840 -223252743 + (T)n Simple_repeat Simple_repeat 1 26 0 2320 100 3 7 chr2 30004147 30004457 -223252126 - AluSc SINE Alu 0 309 1 350 179 179 0 chr2 30005093 30005171 -223251412 + MER8 DNA MER2_type 142 233 -6 1644 198 134 33 chr2 30005442 30005896 -223250687 - MLT1D LTR MaLR -1 504 5 185 143 82 0 chr2 30005918 30005967 -223250616 - L2 LINE L2 -14 3258 3206 409 287 116 0 chr2 30006483 30006612 -223249971 + MIR SINE MIR 21 164 -98 256 303 134 7 chr2 30007302 30007444 -223249139 - MIR3 SINE MIR -16 192 33 311 252 35 52 chr2 30007821 30007936 -223248647 + MIR SINE MIR 70 182 -80 503 268 20 0 chr2 30007975 30008110 -223248473 + MER5A DNA MER1_type 1 153 -36 204 313 101 20 chr2 30009018 30009117 -223247466 - L2 LINE L2 -26 3287 3181 212 273 91 0 chr2 30009223 30009300 -223247283 + L2 LINE L2 3166 3249 -23 222 37 0 0 chr2 30010263 30010290 -223246293 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1487 171 9 101 chr2 30010403 30010731 -223245852 - AluJo SINE Alu 0 302 5 193 371 11 45 chr2 30010892 30010981 -223245602 + MIR SINE MIR 20 105 -157 1686 122 29 31 chr2 30011606 30011932 -223244651 + THE1C LTR MaLR 50 375 0 478 313 67 49 chr2 30012181 30012405 -223244178 + MIR SINE MIR 20 247 -15 254 256 77 68 chr2 30012995 30013141 -223243442 - MER5A DNA MER1_type -7 182 26 221 343 114 0 chr2 30013173 30013278 -223243305 - MIR SINE MIR -62 146 30 1727 180 25 0 chr2 30015305 30015589 -223240994 - AluJo SINE Alu -21 291 1 1883 252 104 35 chr2 30015605 30016590 -223239993 - L1MC5 LINE L1 -501 7460 6493 323 323 68 33 chr2 30016997 30017304 -223239279 - HAL1b LINE L1 -862 486 169 224 149 21 0 chr2 30017857 30017904 -223238679 + GA-rich Low_complexity Low_complexity 1 48 0 575 214 40 8 chr2 30018297 30018423 -223238160 + MIR SINE MIR 20 149 -59 334 357 40 2 chr2 30018992 30019142 -223237441 - MIR3 SINE MIR -36 172 34 180 203 40 108 chr2 30019225 30019299 -223237284 - MIR SINE MIR -108 154 86 2306 100 159 8 chr2 30019409 30019780 -223236803 + MSTA LTR MaLR 2 428 0 374 306 48 7 chr2 30020771 30020918 -223235665 + L1ME4a LINE L1 5969 6121 0 236 330 205 0 chr2 30022220 30022332 -223234251 - L2 LINE L2 -1 3271 3137 807 295 86 26 chr2 30023154 30023574 -223233009 - LTR16B LTR ERVL -2 462 18 371 293 147 13 chr2 30024135 30024285 -223232298 + MIR SINE MIR 93 262 0 682 280 196 56 chr2 30025310 30025729 -223230854 + L3 LINE CR1 800 1159 -418 2421 91 3 3 chr2 30025729 30026036 -223230547 + AluSq SINE Alu 1 307 -6 682 280 196 56 chr2 30026036 30026276 -223230307 + L3 LINE CR1 1159 1551 -26 234 81 0 0 chr2 30027232 30027269 -223229314 + (CAGGG)n Simple_repeat Simple_repeat 4 40 0 326 307 36 14 chr2 30028014 30028154 -223228429 + MIR SINE MIR 69 211 -51 1170 172 172 10 chr2 30028515 30028806 -223227777 + MER2 DNA MER2_type 1 338 -7 2238 83 20 3 chr2 30029888 30030190 -223226393 + AluSx SINE Alu 1 307 -5 238 171 98 110 chr2 30031460 30031542 -223225041 - MLT2F LTR ERVL -2 661 581 1858 191 0 10 chr2 30031953 30032267 -223224316 - AluJo SINE Alu -1 311 1 204 323 23 114 chr2 30032597 30032817 -223223766 - L2 LINE L2 -81 3191 2992 361 284 18 9 chr2 30035569 30035678 -223220905 + MIR SINE MIR 102 211 -51 228 67 0 0 chr2 30037763 30037793 -223218790 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 254 306 37 37 chr2 30037805 30037913 -223218670 - L2 LINE L2 -28 3244 3137 184 333 48 12 chr2 30038194 30038278 -223218305 + L2 LINE L2 3180 3266 -47 206 292 0 0 chr2 30038322 30038370 -223218213 + GA-rich Low_complexity Low_complexity 1 48 0 243 146 0 0 chr2 30038592 30038633 -223217950 + (GGAA)n Simple_repeat Simple_repeat 4 44 0 369 286 79 21 chr2 30039238 30039378 -223217205 - MIR3 SINE MIR -41 167 20 198 333 52 52 chr2 30040211 30040346 -223216237 + L2 LINE L2 3119 3253 -19 623 169 0 1 chr2 30041775 30041905 -223214678 - L1MB1 LINE L1 -3 6165 6057 357 276 75 22 chr2 30042770 30042920 -223213663 + MIR SINE MIR 2 161 -47 273 303 110 0 chr2 30043685 30043794 -223212789 - MIR SINE MIR -36 226 106 928 236 23 16 chr2 30044455 30044713 -223211870 + MIR SINE MIR 3 262 0 674 248 50 0 chr2 30044822 30044983 -223211600 + MER63A DNA MER1_type 13 181 -29 301 58 39 0 chr2 30045382 30045434 -223211149 + (TG)n Simple_repeat Simple_repeat 2 55 0 245 294 0 15 chr2 30045518 30045586 -223210997 + MIR3 SINE MIR 5 71 -137 2402 81 13 7 chr2 30045826 30046133 -223210450 + AluY SINE Alu 1 309 -2 243 0 0 0 chr2 30046274 30046301 -223210282 + (TC)n Simple_repeat Simple_repeat 2 28 0 373 238 0 0 chr2 30047051 30047131 -223209452 - MER116 DNA Mariner 0 80 1 2406 99 14 91 chr2 30047643 30048085 -223208498 - LTR8 LTR ERV1 -283 408 1 256 254 130 65 chr2 30048636 30048821 -223207762 - MIR SINE MIR -36 226 30 256 265 29 69 chr2 30049974 30050076 -223206507 - MIR SINE MIR -74 188 91 719 295 40 9 chr2 30051031 30051258 -223205325 - MIR SINE MIR 0 262 29 186 200 55 73 chr2 30051447 30051502 -223205081 + MIR SINE MIR 159 212 -50 608 179 237 32 chr2 30052164 30052320 -223204263 + MER5A DNA MER1_type 1 188 -1 372 236 225 7 chr2 30052924 30053076 -223203507 + MIR SINE MIR 20 204 -58 224 263 34 68 chr2 30053835 30053953 -223202630 + MIR SINE MIR 107 220 -42 822 274 93 68 chr2 30054087 30054695 -223201888 - L1ME4a LINE L1 -3 6118 5527 396 0 0 0 chr2 30054695 30054739 -223201844 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1761 146 0 57 chr2 30054741 30055042 -223201541 - AluJb SINE Alu -28 284 1 822 274 93 68 chr2 30055042 30055075 -223201508 - L1ME4a LINE L1 -594 5527 5458 384 123 0 74 chr2 30055083 30055164 -223201419 - MADE1 DNA Mariner -5 75 1 190 393 41 8 chr2 30055238 30055360 -223201223 + L2 LINE L2 2941 3066 -206 281 246 18 88 chr2 30055515 30055629 -223200954 - MLT1G LTR MaLR -475 115 10 182 212 0 0 chr2 30055748 30055781 -223200802 - L2 LINE L2 -18 3295 3263 350 264 28 38 chr2 30056233 30056339 -223200244 - MIR3 SINE MIR -22 186 82 1732 157 33 52 chr2 30056341 30056646 -223199937 + AluJo SINE Alu 1 299 -13 2350 91 0 13 chr2 30056670 30056978 -223199605 + AluY SINE Alu 1 304 -7 1785 161 33 14 chr2 30057239 30057600 -223198983 - L1MB2 LINE L1 0 6171 5804 672 171 0 36 chr2 30057600 30057740 -223198843 - L1MB2 LINE L1 -578 5593 5459 915 183 0 43 chr2 30058224 30058388 -223198195 - FRAM SINE Alu -9 157 1 575 319 80 17 chr2 30058788 30059089 -223197494 - L2 LINE L2 0 3313 2994 220 318 0 0 chr2 30059188 30059254 -223197329 + MIR SINE MIR 188 253 -9 326 334 140 14 chr2 30060010 30060540 -223196043 + L2 LINE L2 2449 3044 -269 1876 128 7 4 chr2 30060549 30060822 -223195761 - AluSx SINE Alu -16 296 23 287 270 164 40 chr2 30061043 30061195 -223195388 - L2 LINE L2 -13 3259 3089 307 326 7 43 chr2 30062148 30062286 -223194297 - MER5A DNA MER1_type 0 189 57 434 280 48 8 chr2 30062359 30062484 -223194099 - MIR3 SINE MIR -68 140 11 207 327 0 0 chr2 30064010 30064062 -223192521 + polypyrimidine Low_complexity Low_complexity 2 53 0 243 0 0 0 chr2 30064607 30064634 -223191949 + (TG)n Simple_repeat Simple_repeat 2 28 0 207 200 0 22 chr2 30064665 30064710 -223191873 + GA-rich Low_complexity Low_complexity 4 47 0 201 258 0 97 chr2 30066350 30066412 -223190171 - MIR3 SINE MIR -2 206 151 192 125 0 0 chr2 30066817 30066849 -223189734 + (CACCC)n Simple_repeat Simple_repeat 3 34 0 263 283 81 10 chr2 30067832 30067931 -223188652 - MIR SINE MIR -28 234 129 22 0 0 0 chr2 30068803 30068825 -223187758 + AT_rich Low_complexity Low_complexity 1 22 0 450 309 128 5 chr2 30069490 30069694 -223186889 - MIR SINE MIR -32 230 2 2361 94 10 0 chr2 30070603 30070911 -223185672 - AluY SINE Alu 0 311 1 219 336 46 23 chr2 30070946 30071077 -223185506 - MIR SINE MIR -57 151 18 3053 118 43 4 chr2 30071152 30071620 -223184963 + LTR19A LTR ERV1 1 486 0 201 133 0 0 chr2 30071854 30071884 -223184699 + (TGGA)n Simple_repeat Simple_repeat 4 33 0 1831 150 19 26 chr2 30072722 30073029 -223183554 - AluSx SINE Alu -7 305 1 1634 136 7 55 chr2 30073040 30073348 -223183235 - AluSx SINE Alu -19 293 1 334 294 34 45 chr2 30073884 30074061 -223182522 - MER5B DNA MER1_type 0 178 4 445 169 12 27 chr2 30074429 30074533 -223182050 + MLT1J1 LTR MaLR 28 130 -279 285 286 71 32 chr2 30075300 30075454 -223181129 + MLT1J2 LTR MaLR 280 439 -11 2225 97 0 3 chr2 30076158 30076496 -223180087 + AluSx SINE Alu 3 312 0 366 298 76 8 chr2 30076502 30076633 -223179950 + MIR SINE MIR 53 192 -70 240 269 90 0 chr2 30077672 30077739 -223178844 + MIR SINE MIR 94 166 -96 1853 150 32 35 chr2 30078566 30078879 -223177704 + AluJo SINE Alu 1 312 0 626 238 18 12 chr2 30078977 30079145 -223177438 + MIR SINE MIR 93 261 -1 436 265 73 0 chr2 30080044 30080195 -223176388 + MARNA DNA Mariner 9 170 -416 321 360 20 0 chr2 30080794 30080894 -223175689 - L2 LINE L2 -2 3270 3169 612 266 30 12 chr2 30082171 30082340 -223174243 - MIR SINE MIR -71 191 20 2132 140 0 0 chr2 30083720 30084027 -223172556 - AluSx SINE Alu -5 307 1 201 292 79 0 chr2 30084688 30084777 -223171806 + L2 LINE L2 3168 3263 -9 404 167 19 19 chr2 30085605 30085713 -223170870 + GA-rich Low_complexity Low_complexity 2 109 0 608 214 101 36 chr2 30085811 30085979 -223170604 + MIR SINE MIR 84 262 0 532 301 14 7 chr2 30087335 30087481 -223169102 - MIR SINE MIR -108 154 8 192 299 0 46 chr2 30087579 30087666 -223168917 + L3b LINE CR1 1137 1219 -364 239 233 132 82 chr2 30088114 30088275 -223168308 + MIR3 SINE MIR 2 170 -62 236 237 17 17 chr2 30088636 30088695 -223167888 + MIR SINE MIR 17 75 -133 397 256 0 0 chr2 30088744 30088834 -223167749 - MER96 DNA MER1_type? -85 90 1 645 272 28 11 chr2 30088838 30089018 -223167565 + MIR SINE MIR 68 250 -12 377 269 24 46 chr2 30089722 30089874 -223166709 + MIR SINE MIR 36 183 -62 310 328 57 23 chr2 30090108 30090285 -223166298 - MIR3 SINE MIR -24 184 2 188 176 0 0 chr2 30090895 30090929 -223165654 + L2 LINE L2 3257 3290 -23 210 200 20 20 chr2 30090965 30091015 -223165568 + L2 LINE L2 3262 3311 -2 247 250 13 13 chr2 30091298 30091374 -223165209 + GA-rich Low_complexity Low_complexity 4 79 0 2000 110 51 0 chr2 30093292 30093565 -223163018 + AluSx SINE Alu 1 287 -25 206 295 16 0 chr2 30094154 30094215 -223162368 - MIR SINE MIR -56 152 91 393 293 45 51 chr2 30094618 30094775 -223161808 + MIR SINE MIR 12 167 -95 502 223 8 62 chr2 30095588 30095718 -223160865 - MIR3 SINE MIR -39 169 47 318 302 174 7 chr2 30095779 30095928 -223160655 + MIR3 SINE MIR 10 183 -25 210 209 23 0 chr2 30098833 30098876 -223157707 - L2 LINE L2 -1 3312 3269 346 270 155 29 chr2 30098892 30099066 -223157517 + MIR SINE MIR 10 205 -57 2342 97 0 19 chr2 30099728 30100036 -223156547 + AluSx SINE Alu 1 302 -10 249 273 124 41 chr2 30100807 30100928 -223155655 + L2 LINE L2 3137 3267 -5 217 391 16 0 chr2 30101454 30101518 -223155065 - L2 LINE L2 -92 3180 3116 2460 90 0 0 chr2 30101696 30101997 -223154586 + AluSq SINE Alu 1 301 -12 5153 136 14 28 chr2 30102268 30103500 -223153083 + L1PA16 LINE L1 4925 6151 -15 449 150 0 62 chr2 30103596 30103676 -223152907 + MER5A DNA MER1_type 1 75 -114 2201 112 3 0 chr2 30103676 30103963 -223152620 + AluSg SINE Alu 1 288 -22 799 289 77 35 chr2 30104326 30104703 -223151880 - L3 LINE CR1 -73 1504 1112 2447 70 7 7 chr2 30105196 30105496 -223151087 + AluY SINE Alu 1 300 -11 768 295 51 17 chr2 30106315 30106552 -223150031 + MIR SINE MIR 2 246 -16 197 244 81 58 chr2 30106636 30106722 -223149861 + L2 LINE L2 3153 3240 -32 22 0 0 0 chr2 30107743 30107765 -223148818 + AT_rich Low_complexity Low_complexity 1 22 0 421 242 199 25 chr2 30108352 30108513 -223148070 + MER5A DNA MER1_type 1 189 0 192 276 0 35 chr2 30109525 30109583 -223147000 + MIR SINE MIR 89 144 -118 227 240 0 0 chr2 30109614 30109664 -223146919 + L2 LINE L2 3223 3272 0 558 283 11 13 chr2 30110295 30110462 -223146121 - MIR3 SINE MIR -67 141 9 766 242 72 92 chr2 30110641 30110976 -223145607 + MLT1I LTR MaLR 74 401 -8 2121 108 0 0 chr2 30111741 30112040 -223144543 + AluSq SINE Alu 14 312 0 486 299 32 13 chr2 30112208 30112365 -223144218 + MIR SINE MIR 33 192 -70 510 240 122 5 chr2 30113097 30113260 -223143323 + MER5A DNA MER1_type 4 189 0 357 208 78 58 chr2 30113551 30113705 -223142878 + L1ME4a LINE L1 5961 6117 -4 397 237 191 8 chr2 30114545 30114676 -223141907 - MIR SINE MIR 0 262 108 669 271 55 25 chr2 30114816 30115052 -223141531 + MIR SINE MIR 13 255 -7 305 303 0 46 chr2 30115455 30115564 -223141019 + MIR SINE MIR 42 145 -117 448 167 58 58 chr2 30116544 30116664 -223139919 + L1MB8 LINE L1 5413 5532 -642 925 155 96 46 chr2 30116671 30116910 -223139673 + L1MB8 LINE L1 5928 6178 0 181 313 15 45 chr2 30117495 30117562 -223139021 + MIR SINE MIR 29 93 -169 180 0 0 0 chr2 30118176 30118196 -223138387 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 228 228 0 0 chr2 30118702 30118759 -223137824 + (CA)n Simple_repeat Simple_repeat 1 57 0 503 272 178 0 chr2 30122850 30123030 -223133553 - MIR SINE MIR -16 246 35 267 278 0 42 chr2 30123057 30123129 -223133454 + MIR SINE MIR 36 104 -158 231 238 95 0 chr2 30124157 30124220 -223132363 - MIR SINE MIR -111 151 83 317 331 106 0 chr2 30124437 30124579 -223132004 - MIR SINE MIR -6 256 100 519 216 201 22 chr2 30124810 30125078 -223131505 - L1ME4a LINE L1 -3 6118 5803 289 226 25 63 chr2 30125097 30125256 -223131327 - L1ME4a LINE L1 0 6121 5969 198 314 183 15 chr2 30125763 30125900 -223130683 - L3 LINE CR1 -120 1457 1298 219 36 0 0 chr2 30126544 30126572 -223130011 + (CA)n Simple_repeat Simple_repeat 2 29 0 474 272 0 0 chr2 30126684 30126787 -223129796 - MER5A DNA MER1_type -83 106 4 244 311 33 0 chr2 30126892 30126982 -223129601 + MIR SINE MIR 52 144 -118 267 306 20 27 chr2 30127145 30127292 -223129291 + HAL1b LINE L1 313 458 -890 320 253 106 119 chr2 30127303 30127758 -223128825 - L1 LINE L1 -2839 3307 2859 2110 139 10 0 chr2 30127812 30128121 -223128462 + AluSx SINE Alu 1 312 0 318 184 141 8 chr2 30130918 30131041 -223125542 + MLT1L LTR MaLR 211 435 -180 621 297 81 0 chr2 30131680 30131889 -223124694 + L2 LINE L2 3083 3308 -5 217 320 0 0 chr2 30132166 30132244 -223124339 + (CA)n Simple_repeat Simple_repeat 1 78 0 2167 142 7 0 chr2 30132265 30132575 -223124008 - AluSx SINE Alu 0 312 1 2324 89 10 20 chr2 30132963 30133290 -223123293 + AluSq SINE Alu 1 313 0 255 290 48 90 chr2 30133807 30133952 -223122631 - MIR SINE MIR -47 215 77 1766 252 91 27 chr2 30134159 30134707 -223121876 + MLT1E LTR MaLR 6 588 -5 307 277 0 24 chr2 30135742 30135825 -223120758 + L2 LINE L2 3184 3264 -8 394 250 101 26 chr2 30136003 30136150 -223120433 + MIR SINE MIR 26 172 -36 525 264 123 33 chr2 30136157 30136369 -223120214 - MIR SINE MIR -30 232 2 305 208 113 42 chr2 30137531 30137643 -223118940 + MIR SINE MIR 66 189 -19 205 200 44 0 chr2 30137618 30137663 -223118920 + L2 LINE L2 3207 3253 -19 * 518 238 26 79 chr2 30137754 30137943 -223118640 - MER5A DNA MER1_type -4 185 7 364 165 10 10 chr2 30139366 30139463 -223117120 + GA-rich Low_complexity Low_complexity 2 98 0 198 279 231 27 chr2 30140093 30140240 -223116343 + MIR SINE MIR 7 183 -79 1442 272 21 12 chr2 30144149 30144576 -223112007 + L1MB7 LINE L1 5745 6175 -9 205 270 48 16 chr2 30147371 30147434 -223109149 + MIR SINE MIR 31 95 -167 208 275 114 69 chr2 30151773 30151904 -223104679 - L2 LINE L2 -1018 2296 2160 275 308 0 100 chr2 30152663 30152793 -223103790 + MIR SINE MIR 75 191 -71 624 208 71 12 chr2 30152842 30153010 -223103573 - MER5B DNA MER1_type 0 178 1 209 395 0 0 chr2 30203735 30203816 -223052767 - MIR SINE MIR -95 113 33 5204 145 25 19 chr2 30203999 30204896 -223051687 - MER4D LTR ERV1 0 903 2 196 121 0 0 chr2 30205987 30206020 -223050563 - L2 LINE L2 -10 3303 3271 520 309 20 0 chr2 30206107 30206259 -223050324 - L2 LINE L2 -1 3271 3117 441 169 0 0 chr2 30206732 30206815 -223049768 + (TG)n Simple_repeat Simple_repeat 2 84 0 244 256 12 0 chr2 30207946 30208028 -223048555 - L1ME4a LINE L1 -70 6051 5969 689 286 65 74 chr2 30208120 30208568 -223048015 - L1ME4a LINE L1 -311 5810 5367 204 40 0 0 chr2 30208568 30208593 -223047990 + (TG)n Simple_repeat Simple_repeat 2 26 0 14645 130 33 25 chr2 30208752 30211146 -223045437 + Tigger1 DNA MER2_type 1 2413 -5 202 216 0 0 chr2 30211999 30212036 -223044547 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 3967 30 9 0 chr2 30212137 30212602 -223043981 - L1PA7 LINE L1 -5 6149 5681 2216 114 0 0 chr2 30212887 30213176 -223043407 + AluSx SINE Alu 1 289 -23 275 276 46 35 chr2 30213801 30213888 -223042695 - MIR3 SINE MIR -12 196 109 490 289 70 0 chr2 30213907 30214063 -223042520 + MER5B DNA MER1_type 5 171 -7 192 211 96 0 chr2 30214585 30214637 -223041946 + MIR SINE MIR 205 261 -1 378 42 0 0 chr2 30214707 30214755 -223041828 + (CA)n Simple_repeat Simple_repeat 1 48 0 195 228 0 88 chr2 30216442 30216499 -223040084 + L2 LINE L2 3193 3244 -28 2135 112 0 14 chr2 30216676 30216998 -223039585 + AluY SINE Alu 1 318 0 423 0 0 0 chr2 30217811 30217858 -223038725 + (TG)n Simple_repeat Simple_repeat 2 48 0 2110 117 4 4 chr2 30219034 30219357 -223037226 - AluSx SINE Alu 0 323 1 272 190 13 0 chr2 30219639 30219718 -223036865 + CT-rich Low_complexity Low_complexity 1 80 0 251 348 30 18 chr2 30219758 30219922 -223036661 - MIR3 SINE MIR -7 201 36 241 321 93 29 chr2 30222619 30222759 -223033824 + L2 LINE L2 3123 3271 -1 2530 65 0 3 chr2 30224589 30224897 -223031686 - AluY SINE Alu -4 307 1 267 295 39 0 chr2 30225190 30225268 -223031315 + (CACG)n Simple_repeat Simple_repeat 4 84 0 299 298 199 7 chr2 30225966 30226107 -223030476 + MER5A DNA MER1_type 9 176 -13 1182 166 0 0 chr2 30226945 30227120 -223029463 - AluJb SINE Alu -1 311 137 231 36 0 0 chr2 30227517 30227545 -223029038 + (T)n Simple_repeat Simple_repeat 1 28 0 589 201 176 25 chr2 30227951 30228155 -223028428 - MIR SINE MIR -13 249 15 191 86 0 29 chr2 30228196 30228231 -223028352 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 300 293 12 0 chr2 30228502 30228584 -223027999 - L3 LINE CR1 -10 1567 1485 215 270 106 74 chr2 30229126 30229315 -223027268 + MIR SINE MIR 20 214 -48 1359 186 134 3 chr2 30230465 30230516 -223026067 + MER63C DNA MER1_type 1 44 -1016 189 0 0 0 chr2 30230516 30230537 -223026046 + (TG)n Simple_repeat Simple_repeat 2 22 0 1359 186 134 3 chr2 30230537 30230792 -223025791 + MER63C DNA MER1_type 44 347 -583 2423 234 80 100 chr2 30230992 30231937 -223024646 - HAL1 LINE L1 -8 2499 1584 2373 75 0 19 chr2 30231937 30232244 -223024339 + AluY SINE Alu 1 301 -10 2423 234 80 100 chr2 30232244 30232562 -223024021 - HAL1 LINE L1 -923 1584 1261 402 254 0 0 chr2 30232562 30232704 -223023879 + (TG)n Simple_repeat Simple_repeat 2 143 0 667 169 0 22 chr2 30232715 30232899 -223023684 + (TG)n Simple_repeat Simple_repeat 1 180 0 2178 277 76 33 chr2 30232938 30234006 -223022577 - HAL1 LINE L1 -1256 1251 97 2182 144 0 0 chr2 30234637 30234949 -223021634 + AluJb SINE Alu 1 312 0 312 120 0 0 chr2 30235011 30235061 -223021522 + (CA)n Simple_repeat Simple_repeat 1 50 0 27 0 0 0 chr2 30235061 30235088 -223021495 + AT_rich Low_complexity Low_complexity 1 27 0 470 255 0 10 chr2 30236284 30236386 -223020197 + MER81 DNA DNA 1 101 -13 356 241 139 38 chr2 30236518 30236676 -223019907 + MIR SINE MIR 79 252 -10 243 354 16 8 chr2 30237027 30237154 -223019429 - L2 LINE L2 -8 3264 3137 307 327 113 6 chr2 30237565 30237733 -223018850 + L1ME LINE L1 5670 5855 -266 834 190 85 35 chr2 30237803 30238003 -223018580 - MER63A DNA MER1_type 0 210 1 27 0 0 0 chr2 30238108 30238135 -223018448 + AT_rich Low_complexity Low_complexity 1 27 0 827 171 0 0 chr2 30238160 30238289 -223018294 + FLAM_C SINE Alu 2 130 -3 2461 127 77 10 chr2 30238547 30238948 -223017635 - MSTA LTR MaLR 0 428 1 207 286 0 0 chr2 30239195 30239258 -223017325 + L2 LINE L2 3210 3272 0 568 239 161 0 chr2 30239275 30239455 -223017128 + MER63A DNA MER1_type 1 209 -1 640 238 48 6 chr2 30240492 30240660 -223015923 - MIR SINE MIR -60 202 28 2497 70 0 3 chr2 30240662 30240964 -223015619 - AluSc SINE Alu -8 301 1 616 275 34 24 chr2 30243293 30243500 -223013083 - MIR SINE MIR -12 250 42 264 250 0 0 chr2 30243540 30243604 -223012979 + (TG)n Simple_repeat Simple_repeat 2 65 0 234 150 0 0 chr2 30244314 30244354 -223012229 + (CACG)n Simple_repeat Simple_repeat 4 43 0 1865 139 7 4 chr2 30245492 30245765 -223010818 + AluSx SINE Alu 32 305 -7 568 206 0 75 chr2 30245918 30246078 -223010505 + MER58C DNA MER1_type 68 215 0 210 228 53 0 chr2 30246078 30246135 -223010448 + L2 LINE L2 2742 2801 -513 249 57 0 0 chr2 30246150 30246185 -223010398 + (CA)n Simple_repeat Simple_repeat 2 36 0 406 200 33 0 chr2 30246203 30246293 -223010290 + MER53 DNA DNA 96 188 -1 447 247 105 6 chr2 30246307 30246463 -223010120 + MIR SINE MIR 2 176 -32 583 327 142 13 chr2 30246510 30246944 -223009639 + L2 LINE L2 2804 3299 -14 2203 98 20 14 chr2 30246944 30247241 -223009342 + AluSx SINE Alu 1 299 -13 583 327 142 13 chr2 30247241 30247256 -223009327 + L2 LINE L2 3299 3311 -2 552 306 63 66 chr2 30247337 30247670 -223008913 - L2 LINE L2 -54 3218 2887 184 311 44 23 chr2 30248031 30248151 -223008432 + MIR3 SINE MIR 106 231 -31 1173 195 0 0 chr2 30249056 30249269 -223007314 - AluJo SINE Alu 0 307 95 310 327 10 10 chr2 30249613 30249717 -223006866 + MIR3 SINE MIR 12 115 -93 1389 163 139 39 chr2 30251054 30251123 -223005460 - MER47A DNA MER2_type -1958 365 304 2729 32 3 0 chr2 30251123 30251432 -223005151 + AluY SINE Alu 1 310 -1 1389 163 139 39 chr2 30251432 30251693 -223004890 - MER47A DNA MER2_type -2019 304 2 239 167 21 0 chr2 30251764 30251812 -223004771 + MIR SINE MIR 103 151 -111 2064 140 35 6 chr2 30252320 30252663 -223003920 + MER7C DNA MER2_type 2 354 -248 224 292 0 31 chr2 30252663 30252697 -223003886 + CT-rich Low_complexity Low_complexity 3 36 -29 2092 103 0 24 chr2 30252697 30252988 -223003595 - AluSg SINE Alu -26 284 1 224 292 0 31 chr2 30252988 30253018 -223003565 + CT-rich Low_complexity Low_complexity 36 65 0 879 59 0 0 chr2 30253022 30253140 -223003443 + (TTCC)n Simple_repeat Simple_repeat 1 118 0 1309 181 0 0 chr2 30253180 30253390 -223003193 - AluJo SINE Alu -102 210 1 1557 136 27 27 chr2 30253392 30253650 -223002933 + MER7C DNA MER2_type 345 602 -1 868 253 0 5 chr2 30254472 30254658 -223001925 + MER5A DNA MER1_type 5 189 0 1893 117 4 0 chr2 30254761 30255018 -223001565 + AluSx SINE Alu 36 293 -19 242 313 9 35 chr2 30255077 30255192 -223001391 + MER5A DNA MER1_type 50 161 -28 479 252 161 0 chr2 30255226 30255381 -223001202 + MER5A DNA MER1_type 10 189 0 202 270 0 48 chr2 30256069 30256132 -223000451 + L3b LINE CR1 1517 1576 -7 242 284 0 30 chr2 30256132 30256199 -223000384 - L2 LINE L2 -16 3297 3233 223 301 132 42 chr2 30256588 30256801 -222999782 + L3 LINE CR1 1339 1570 -7 716 271 19 23 chr2 30257536 30257798 -222998785 + MIR SINE MIR 2 262 0 307 319 158 19 chr2 30257923 30258183 -222998400 - L2 LINE L2 0 3272 2977 378 280 119 31 chr2 30258473 30258666 -222997917 + MIR SINE MIR 39 248 -14 819 250 57 55 chr2 30258759 30259072 -222997511 + MLT1G1 LTR MaLR 1 280 -250 505 183 0 0 chr2 30259072 30259154 -222997429 + AluJb SINE Alu 203 284 -28 1078 194 97 0 chr2 30259204 30259421 -222997162 + MLT1G1 LTR MaLR 358 595 0 295 331 33 0 chr2 30259529 30259650 -222996933 + MIR3 SINE MIR 60 184 -24 267 340 11 0 chr2 30261239 30261333 -222995250 - MIR3 SINE MIR -21 187 93 2735 152 83 25 chr2 30262270 30262737 -222993846 - L1MC1 LINE L1 -2 6331 5828 2197 131 0 6 chr2 30262737 30263051 -222993532 - AluSx SINE Alu 0 312 1 2735 152 83 25 chr2 30263051 30263110 -222993473 - L1MC1 LINE L1 -505 5828 5774 398 262 24 0 chr2 30263306 30263474 -222993109 + (TCTG)n Simple_repeat Simple_repeat 1 171 0 232 285 76 62 chr2 30264018 30264162 -222992421 - MIR SINE MIR -70 192 47 2174 116 0 7 chr2 30264193 30264494 -222992089 - AluSc SINE Alu -10 299 1 1855 168 6 19 chr2 30264501 30264816 -222991767 - AluJo SINE Alu -1 311 1 210 256 39 93 chr2 30265505 30265634 -222990949 + L2 LINE L2 3151 3272 0 324 359 55 13 chr2 30266075 30266312 -222990271 - L3 LINE CR1 -405 1172 926 522 287 84 48 chr2 30266450 30266913 -222989670 - L1ME4a LINE L1 -58 6063 5584 208 208 97 69 chr2 30266994 30267066 -222989517 - L3 LINE CR1 -878 699 626 208 292 31 31 chr2 30267063 30267128 -222989455 - L2 LINE L2 -2 3270 3206 643 223 211 4 chr2 30267380 30267645 -222988938 - L1ME4a LINE L1 -16 6105 5786 659 293 50 25 chr2 30267673 30267831 -222988752 + MIR SINE MIR 18 185 -77 2494 133 5 8 chr2 30267831 30268207 -222988376 - THE1C LTR MaLR 0 375 1 659 293 50 25 chr2 30268207 30268287 -222988296 + MIR SINE MIR 185 262 0 183 129 0 0 chr2 30268287 30268318 -222988265 + (CTA)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr2 30268796 30268830 -222987753 + AT_rich Low_complexity Low_complexity 1 34 0 47 53 0 0 chr2 30268894 30268969 -222987614 + AT_rich Low_complexity Low_complexity 1 75 0 338 322 25 0 chr2 30268973 30269091 -222987492 - L1ME4a LINE L1 -2331 5477 5357 368 342 0 0 chr2 30269307 30269424 -222987159 - L3 LINE CR1 -1278 299 183 690 306 20 28 chr2 30270112 30270360 -222986223 - MIR SINE MIR 0 262 17 2058 166 14 17 chr2 30270835 30271196 -222985387 - MLT1A1 LTR MaLR -3 362 3 384 208 47 28 chr2 30273862 30273968 -222982615 + L1ME4a LINE L1 5984 6091 -30 295 207 58 0 chr2 30274385 30274472 -222982111 + CT-rich Low_complexity Low_complexity 4 95 0 207 342 17 25 chr2 30275077 30275197 -222981386 + L2 LINE L2 2964 3082 -190 258 319 44 0 chr2 30275318 30275431 -222981152 + L2 LINE L2 3155 3272 0 510 284 57 26 chr2 30275432 30275626 -222980957 + MIR SINE MIR 57 256 -6 224 382 65 12 chr2 30275756 30275926 -222980657 + MIR3 SINE MIR 26 204 -4 245 327 58 26 chr2 30276162 30276330 -222980253 - MIR SINE MIR -48 214 44 319 221 187 1 chr2 30276870 30276978 -222979605 + MIR SINE MIR 60 186 -62 278 286 79 0 chr2 30278335 30278461 -222978122 - L2 LINE L2 -213 3059 2924 203 293 0 13 chr2 30279027 30279102 -222977481 - MIR3 SINE MIR -1 207 134 215 269 62 97 chr2 30280032 30280177 -222976406 - MIR SINE MIR -58 204 65 1514 259 194 16 chr2 30280203 30281161 -222975422 - L2 LINE L2 -1 3312 2155 1784 275 193 12 chr2 30281597 30282585 -222973998 - L2 LINE L2 -1205 2109 943 634 314 32 20 chr2 30284001 30284249 -222972334 + MIR SINE MIR 9 259 -3 219 232 29 14 chr2 30284858 30284927 -222971656 + CT-rich Low_complexity Low_complexity 1 70 0 261 353 33 0 chr2 30285040 30285162 -222971421 + MIR SINE MIR 100 225 -37 2268 70 0 85 chr2 30286580 30286908 -222969675 - AluY SINE Alu -11 300 1 227 208 42 0 chr2 30287452 30287500 -222969083 - HSMAR1 DNA Mariner -1235 52 3 219 201 19 6 chr2 30288287 30288348 -222968235 + MIR SINE MIR 109 147 -61 26 0 0 0 chr2 30290001 30290027 -222966556 + AT_rich Low_complexity Low_complexity 1 26 0 2112 211 45 11 chr2 30290409 30290855 -222965728 + MLT1C LTR MaLR 7 467 0 228 316 10 0 chr2 30291906 30292004 -222964579 + (CAGAGA)n Simple_repeat Simple_repeat 3 101 0 195 312 141 54 chr2 30292209 30292507 -222964076 - L2 LINE L2 -16 3256 2933 1839 153 18 0 chr2 30292960 30293234 -222963349 + AluSx SINE Alu 1 279 -33 354 45 0 0 chr2 30293234 30293278 -222963305 + (CA)n Simple_repeat Simple_repeat 1 44 0 2423 94 5 77 chr2 30293427 30293819 -222962764 - THE1B LTR MaLR 0 364 1 295 224 156 19 chr2 30294896 30295069 -222961514 - MIR SINE MIR -11 197 5 2101 128 0 3 chr2 30295402 30295690 -222960893 + AluSx SINE Alu 1 287 -25 235 184 20 0 chr2 30295709 30295758 -222960825 - L3 LINE CR1 -73 1504 1455 495 0 0 0 chr2 30296740 30296795 -222959788 + (CA)n Simple_repeat Simple_repeat 2 56 0 496 275 37 63 chr2 30296824 30297013 -222959570 + MIR3 SINE MIR 16 199 -9 512 264 86 0 chr2 30297584 30297724 -222958859 - MIR3 SINE MIR -11 197 46 441 355 27 18 chr2 30297963 30298183 -222958400 - MIR SINE MIR -28 234 13 417 20 0 0 chr2 30298480 30298530 -222958053 + (TA)n Simple_repeat Simple_repeat 2 51 0 2330 84 0 0 chr2 30298530 30298814 -222957769 - AluSx SINE Alu -7 305 22 188 282 51 13 chr2 30298862 30298940 -222957643 - MIR SINE MIR -68 140 60 2534 109 17 3 chr2 30300824 30301183 -222955400 + THE1B LTR MaLR 1 364 0 415 314 89 0 chr2 30301899 30302068 -222954515 + MIR SINE MIR 69 252 -10 2266 94 7 0 chr2 30303208 30303507 -222953076 - AluSp SINE Alu -12 301 1 283 335 66 22 chr2 30303696 30303878 -222952705 - MIR3 SINE MIR -5 203 14 261 341 63 0 chr2 30304378 30304504 -222952079 + MIR SINE MIR 93 226 -36 810 113 0 0 chr2 30306688 30306803 -222949780 - L1PA8 LINE L1 -2 6170 6056 187 54 54 0 chr2 30306806 30306843 -222949740 + T-rich Low_complexity Low_complexity 37 75 0 6663 56 0 5 chr2 30307227 30308210 -222948373 - L1PA7 LINE L1 0 6154 5189 307 320 27 39 chr2 30308273 30308452 -222948131 - MIR SINE MIR -70 138 6 830 191 5 31 chr2 30309216 30309410 -222947173 - MER53 DNA DNA 0 189 1 281 320 10 0 chr2 30309862 30309965 -222946618 - MIR SINE MIR -72 136 33 399 21 0 0 chr2 30310316 30310364 -222946219 + (TG)n Simple_repeat Simple_repeat 2 49 0 357 324 28 21 chr2 30310372 30310514 -222946069 - MER5B DNA MER1_type -5 173 31 938 297 27 33 chr2 30310812 30311022 -222945561 - L1ME3A LINE L1 -304 5866 5656 1906 113 44 118 chr2 30311022 30311386 -222945197 + MER1B DNA MER1_type 1 337 0 938 297 27 33 chr2 30311386 30311626 -222944957 - L1ME3A LINE L1 -514 5656 5419 1528 251 33 15 chr2 30313674 30314128 -222942455 - MLT1C LTR MaLR 0 467 6 243 237 65 21 chr2 30315229 30315322 -222941261 - Charlie7 DNA MER1_type -1 2611 2515 528 279 86 10 chr2 30315833 30316217 -222940366 + L1ME4a LINE L1 5707 6119 -2 504 224 135 26 chr2 30317118 30317274 -222939309 + MIR3 SINE MIR 15 187 -21 1529 170 132 62 chr2 30317623 30318077 -222938506 + MLT1D LTR MaLR 20 505 0 310 321 27 27 chr2 30318744 30318856 -222937727 + L2 LINE L2 3151 3262 -10 180 367 46 18 chr2 30318866 30318975 -222937608 - MIR SINE MIR -141 121 10 212 271 59 12 chr2 30319386 30319471 -222937112 + MIR3 SINE MIR 81 169 -39 2314 122 0 0 chr2 30320365 30320676 -222935907 - AluSx SINE Alu -1 311 1 1926 171 7 0 chr2 30322447 30322745 -222933838 + 7SLRNA srpRNA srpRNA 1 300 -20 4718 245 44 59 chr2 30322793 30326446 -222930137 + L1ME4a LINE L1 883 4608 -2036 507 100 0 40 chr2 30326470 30326570 -222930013 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 3088 226 81 14 chr2 30326653 30327740 -222928843 + L1ME4a LINE L1 4665 5824 -820 648 213 0 8 chr2 30327745 30327872 -222928711 + FLAM_C SINE Alu 1 126 -17 268 326 22 0 chr2 30328044 30328133 -222928450 - MIR SINE MIR -116 146 56 400 251 120 87 chr2 30328405 30328680 -222927903 + L1ME4a LINE L1 6195 6478 -141 17965 27 0 0 chr2 30328680 30331595 -222924988 + L1PA3 LINE L1 3236 6155 0 30 77 0 0 chr2 30331822 30331887 -222924696 + AT_rich Low_complexity Low_complexity 1 65 0 8552 197 44 9 chr2 30331912 30334700 -222921883 + L1MA4 LINE L1 1 2982 -3346 2589 79 37 8 chr2 30334700 30335054 -222921529 + THE1B LTR MaLR 1 364 0 8552 197 44 9 chr2 30335054 30336482 -222920101 + L1MA4 LINE L1 2982 4360 -1968 2899 144 35 1 chr2 30336479 30337053 -222919530 + L1MA4 LINE L1 5728 6346 -7 * 290 267 56 11 chr2 30337067 30337157 -222919426 - MIR3 SINE MIR -102 106 13 238 355 62 47 chr2 30337165 30337376 -222919207 + L3b LINE CR1 1358 1571 -12 495 363 106 3 chr2 30337443 30337746 -222918837 + L3 LINE CR1 194 527 -1050 204 280 40 0 chr2 30338228 30338278 -222918305 - L2 LINE L2 -21 3251 3200 1814 168 47 0 chr2 30338484 30338782 -222917801 + AluJo SINE Alu 1 312 0 189 306 159 19 chr2 30338867 30339024 -222917559 + MIR SINE MIR 76 254 -8 198 368 84 25 chr2 30339067 30339306 -222917277 - L2 LINE L2 -450 2864 2612 240 191 21 0 chr2 30340309 30340356 -222916227 + GA-rich Low_complexity Low_complexity 1 48 0 349 283 55 55 chr2 30340773 30340918 -222915665 - L2 LINE L2 0 3313 3169 1928 161 3 7 chr2 30341559 30341869 -222914714 + AluSx SINE Alu 1 309 -3 473 276 153 15 chr2 30342018 30342214 -222914369 + MIR SINE MIR 3 225 -37 572 339 62 18 chr2 30342469 30342693 -222913890 + MIR SINE MIR 8 241 -21 206 248 41 50 chr2 30343046 30343167 -222913416 + CT-rich Low_complexity Low_complexity 1 120 0 330 206 0 0 chr2 30343962 30344035 -222912548 + MSTB2 LTR MaLR 385 457 0 194 330 11 0 chr2 30345416 30345504 -222911079 - MIR SINE MIR -72 136 48 311 327 116 8 chr2 30346347 30346518 -222910065 - MIR3 SINE MIR -62 146 3 860 279 34 0 chr2 30347050 30347258 -222909325 + MIR SINE MIR 43 257 -5 248 261 43 29 chr2 30347439 30347508 -222909075 - MIR3 SINE MIR -11 197 128 290 207 135 9 chr2 30347597 30347708 -222908875 - L1ME1 LINE L1 -18 6148 6024 300 261 157 17 chr2 30349486 30349601 -222906982 + MIR3 SINE MIR 14 144 -64 1879 146 14 0 chr2 30349716 30349991 -222906592 - AluSx SINE Alu -33 279 1 293 326 174 20 chr2 30350121 30350317 -222906266 - MIR SINE MIR -8 254 29 4023 193 48 8 chr2 30350506 30351336 -222905247 - MER21B LTR ERV1 0 863 1 292 234 234 0 chr2 30352070 30352164 -222904419 + MER91C DNA MER1_type 24 139 -1 964 238 31 0 chr2 30353356 30353549 -222903034 + MER21B LTR ERV1 1 199 -664 601 332 64 30 chr2 30354019 30354426 -222902157 + HAL1 LINE L1 497 917 -1590 252 148 0 0 chr2 30354502 30354524 -222902059 + (CA)n Simple_repeat Simple_repeat 1 22 -32 240 35 0 0 chr2 30354524 30354553 -222902030 + (TC)n Simple_repeat Simple_repeat 1 29 0 252 148 0 0 chr2 30354553 30354584 -222901999 + (CA)n Simple_repeat Simple_repeat 21 54 0 1546 272 13 15 chr2 30354598 30355072 -222901511 + HAL1 LINE L1 1351 1823 -684 318 269 82 8 chr2 30355081 30355094 -222901489 + HAL1 LINE L1 2364 2375 -132 2210 128 0 25 chr2 30355094 30355452 -222901131 + L1MB3 LINE L1 5835 6183 0 318 269 82 8 chr2 30355452 30355572 -222901011 + HAL1 LINE L1 2375 2507 0 183 270 0 0 chr2 30355597 30355660 -222900923 - L2 LINE L2 -299 2973 2911 379 220 58 64 chr2 30355808 30355981 -222900602 - MER113 DNA MER1_type? -306 215 44 219 69 0 0 chr2 30356714 30356743 -222899840 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 2542 286 73 17 chr2 30356751 30358143 -222898440 - L2 LINE L2 -2 3311 1838 230 211 256 33 chr2 30358169 30358259 -222898324 + MIR3 SINE MIR 97 206 -2 5695 35 3 0 chr2 30359361 30360025 -222896558 - L1PA4 LINE L1 0 6155 5490 313 159 14 43 chr2 30361598 30361667 -222894916 - MER5A DNA MER1_type -78 111 45 259 333 114 23 chr2 30361722 30361854 -222894729 + MER5A DNA MER1_type 44 187 -2 266 315 95 74 chr2 30362487 30363096 -222893487 + L2 LINE L2 2633 3268 -45 2314 133 18 83 chr2 30363096 30363554 -222893029 - MSTA LTR MaLR 0 428 1 266 315 95 74 chr2 30363554 30363601 -222892982 + L2 LINE L2 3268 3313 0 4738 197 30 45 chr2 30365854 30366048 -222890535 - L1MD1 LINE L1 -2 6240 6045 1738 126 4 4 chr2 30366048 30366295 -222890288 - AluSx SINE Alu -16 296 50 4738 197 30 45 chr2 30366295 30367721 -222888862 - L1MD1 LINE L1 -197 6045 4663 1374 221 163 38 chr2 30367767 30367835 -222888748 - MLT1D LTR MaLR 0 505 447 1702 132 43 83 chr2 30367835 30368160 -222888423 + AluSx SINE Alu 1 312 0 1374 221 163 38 chr2 30368160 30368540 -222888043 - MLT1D LTR MaLR -58 447 1 3546 214 28 34 chr2 30368540 30369507 -222887076 - L1MD1 LINE L1 -1563 4583 3623 827 92 100 0 chr2 30369527 30369647 -222886936 + AluSg/x SINE Alu 159 290 -20 230 152 0 0 chr2 30369683 30369716 -222886867 + Alu SINE Alu 88 120 -13 1748 270 69 6 chr2 30369723 30370433 -222886150 - L1MD1 LINE L1 -2510 3636 2882 702 223 106 78 chr2 30370633 30370736 -222885847 - MLT1B LTR MaLR -7 383 284 2241 103 16 53 chr2 30370736 30371114 -222885469 + THE1B LTR MaLR 1 364 0 702 223 106 78 chr2 30371114 30371293 -222885290 - MLT1B LTR MaLR -106 284 93 188 204 0 136 chr2 30372167 30372255 -222884328 - MIR SINE MIR -72 190 115 580 240 55 39 chr2 30374732 30374986 -222881597 - L1ME4a LINE L1 0 6121 5864 365 0 22 0 chr2 30375189 30375234 -222881349 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 2217 91 7 0 chr2 30375266 30375551 -222881032 + AluSx SINE Alu 3 289 -23 335 233 129 45 chr2 30376768 30376961 -222879622 - MIR SINE MIR -55 207 1 33 0 0 0 chr2 30377847 30377880 -222878703 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr2 30378072 30378095 -222878488 + AT_rich Low_complexity Low_complexity 1 23 0 378 285 0 16 chr2 30378636 30378759 -222877824 + MIR SINE MIR 108 228 -34 1875 159 29 40 chr2 30381622 30381871 -222874712 - MLT1A2 LTR MaLR 0 374 129 2430 112 22 27 chr2 30381871 30382237 -222874346 - THE1B LTR MaLR 0 364 1 1875 159 29 40 chr2 30382237 30382365 -222874218 - MLT1A2 LTR MaLR -245 129 1 535 268 0 0 chr2 30382776 30382899 -222873684 + Tigger3(Golem) DNA MER2_type 2905 3027 -2 228 223 136 19 chr2 30383211 30383314 -222873269 + MIR SINE MIR 120 234 -28 1360 103 15 15 chr2 30383684 30383888 -222872695 - L1PA11 LINE L1 0 6174 5971 24 53 0 0 chr2 30384593 30384631 -222871952 + AT_rich Low_complexity Low_complexity 1 38 0 796 256 30 10 chr2 30384762 30384965 -222871618 + MIR SINE MIR 5 211 -51 782 256 86 15 chr2 30385026 30385350 -222871233 - L1ME4a LINE L1 -239 5882 5536 580 325 122 9 chr2 30385419 30385764 -222870819 - L2 LINE L2 -1 3271 2888 2778 74 11 0 chr2 30385867 30386218 -222870365 + THE1A LTR MaLR 1 355 0 221 322 123 20 chr2 30387665 30387811 -222868772 - MIR3 SINE MIR -19 189 29 1123 222 71 57 chr2 30387884 30388236 -222868347 + MLT1B LTR MaLR 34 390 0 21 71 0 0 chr2 30389287 30389329 -222867254 + AT_rich Low_complexity Low_complexity 1 42 0 2419 97 0 0 chr2 30389352 30389662 -222866921 - AluSg SINE Alu 0 310 1 760 143 198 33 chr2 30390591 30390857 -222865726 - MER31B LTR ERV1 0 466 33 216 266 142 9 chr2 30390873 30390986 -222865597 - MIR SINE MIR -17 245 118 3388 184 18 36 chr2 30391239 30391923 -222864660 - LTR51 LTR ERV1 0 671 1 655 274 35 13 chr2 30392850 30393076 -222863507 - MIR SINE MIR -1 261 31 826 171 0 20 chr2 30393296 30393442 -222863141 + FLAM_C SINE Alu 1 143 0 1839 198 67 25 chr2 30393442 30393876 -222862707 - MER31B LTR ERV1 -13 453 2 194 271 141 12 chr2 30394079 30394164 -222862419 - MIR SINE MIR -64 144 49 1867 151 125 13 chr2 30395517 30395902 -222860681 - MSTA LTR MaLR 0 428 1 189 278 78 0 chr2 30396020 30396110 -222860473 + MIR SINE MIR 156 252 -10 343 286 166 27 chr2 30397419 30397535 -222859048 + L3 LINE CR1 1281 1380 -197 1767 199 7 0 chr2 30397535 30397832 -222858751 + AluJo SINE Alu 1 299 -13 343 286 166 27 chr2 30397832 30397974 -222858609 + L3 LINE CR1 1380 1575 -2 1926 155 4 0 chr2 30398255 30398554 -222858029 + AluSx SINE Alu 3 302 0 230 273 0 0 chr2 30398946 30399001 -222857582 + MIR SINE MIR 46 100 -108 892 226 67 64 chr2 30399078 30399437 -222857146 - L2 LINE L2 -1 3312 2953 1506 248 101 7 chr2 30399668 30400241 -222856342 - L2 LINE L2 -1074 2240 1614 420 259 22 7 chr2 30400511 30400646 -222855937 + MER103 DNA DNA 9 145 -21 1190 175 28 14 chr2 30400716 30400933 -222855650 - MER58A DNA MER1_type 0 224 5 270 293 20 20 chr2 30401527 30401626 -222854957 + L3 LINE CR1 1265 1363 -214 1571 198 54 37 chr2 30401753 30402106 -222854477 - MLT1A2 LTR MaLR -15 359 1 1586 156 146 3 chr2 30402151 30402446 -222854137 + MER1B DNA MER1_type 1 337 0 207 203 149 27 chr2 30603880 30603954 -222652629 + MIR SINE MIR 21 103 -105 300 27 0 0 chr2 30604284 30604321 -222652262 + (TG)n Simple_repeat Simple_repeat 1 37 0 185 289 119 62 chr2 30604878 30605072 -222651511 + L2 LINE L2 3109 3313 0 280 248 73 28 chr2 30605103 30605212 -222651371 - MLT1K LTR MaLR -44 544 431 751 250 91 19 chr2 30605293 30605501 -222651082 - MLT1K LTR MaLR -364 224 2 210 245 191 0 chr2 30606085 30606179 -222650404 - MIR SINE MIR -63 145 34 10595 172 23 20 chr2 30606863 30608544 -222648039 + L1 LINE L1 2884 4575 -1571 547 115 0 0 chr2 30608544 30608622 -222647961 + MADE1 DNA Mariner 3 80 0 10595 172 23 20 chr2 30608622 30609067 -222647516 + L1 LINE L1 4575 5017 -1129 5889 29 6 0 chr2 30609167 30609852 -222646731 + L1PA4 LINE L1 5467 6155 0 6537 205 57 23 chr2 30609871 30611800 -222644783 + L1M4 LINE L1 3569 5561 -613 250 191 0 0 chr2 30612110 30612157 -222644426 + MLT1K LTR MaLR 509 555 -33 298 244 110 24 chr2 30612216 30612343 -222644240 + MER5A DNA MER1_type 1 138 -51 2422 70 6 19 chr2 30612343 30612658 -222643925 - AluSx SINE Alu 0 312 2 1198 158 0 11 chr2 30612671 30612861 -222643722 - AluJ SINE Alu -16 296 109 2219 91 3 53 chr2 30612880 30613198 -222643385 - AluSp SINE Alu -11 302 1 2121 151 34 79 chr2 30613200 30613671 -222642912 + LTR46 LTR ERV1 11 460 0 2312 77 40 0 chr2 30613675 30613973 -222642610 + AluSp SINE Alu 1 310 -3 649 193 0 0 chr2 30613983 30614092 -222642491 - AluJ SINE Alu -202 110 2 1181 134 6 0 chr2 30614521 30614692 -222641891 - AluSg/x SINE Alu -10 302 131 1411 291 110 27 chr2 30615836 30616643 -222639940 + L2 LINE L2 745 1618 -1696 1587 128 4 75 chr2 30616663 30616788 -222639795 + AluJo SINE Alu 17 115 -197 2181 98 42 0 chr2 30616788 30617075 -222639508 + AluSx SINE Alu 1 299 -13 1587 128 4 75 chr2 30617075 30617215 -222639368 + AluJo SINE Alu 115 263 -49 331 301 18 30 chr2 30617262 30617428 -222639155 - L1M4 LINE L1 -5110 1432 1269 1168 258 55 48 chr2 30617651 30618251 -222638332 - L1M4 LINE L1 -3324 2822 2219 568 111 12 0 chr2 30618254 30618335 -222638248 + AluJ/FLAM SINE Alu 5 86 -226 623 275 40 75 chr2 30619100 30619474 -222637109 + L1ME3A LINE L1 3750 4110 -2036 1116 226 104 18 chr2 30619476 30620092 -222636491 + L1ME3A LINE L1 4915 5578 -592 695 117 9 27 chr2 30620096 30620207 -222636376 - THE1B LTR MaLR 0 364 256 1628 205 28 31 chr2 30620207 30620598 -222635985 + L1ME3A LINE L1 5582 5971 -199 2671 52 3 0 chr2 30620622 30620931 -222635652 - AluSp SINE Alu -3 310 1 651 171 116 20 chr2 30621051 30621197 -222635386 - MER97c DNA MER1_type? -912 178 19 256 237 17 0 chr2 30621210 30621269 -222635314 + L1ME3A LINE L1 6103 6162 -8 2218 116 10 3 chr2 30621688 30621998 -222634585 - AluSx SINE Alu 0 312 1 299 136 0 2 chr2 30622863 30622916 -222633667 + Alu SINE Alu 254 299 -3 2195 112 3 0 chr2 30623435 30623731 -222632852 - AluSx SINE Alu -10 302 6 1729 161 50 0 chr2 30623881 30624160 -222632423 + AluSx SINE Alu 1 293 -19 1835 134 7 7 chr2 30624642 30624926 -222631657 - AluSq SINE Alu -29 284 1 2220 58 4 0 chr2 30624950 30625211 -222631372 - AluY SINE Alu -12 299 38 506 115 11 11 chr2 30625813 30625900 -222630683 + AluJb SINE Alu 158 244 -68 180 125 0 0 chr2 30625938 30625970 -222630613 + (T)n Simple_repeat Simple_repeat 1 32 0 771 155 8 8 chr2 30626171 30626300 -222630283 - FLAM_C SINE Alu -4 129 1 295 245 122 48 chr2 30626978 30627125 -222629458 + L1ME3A LINE L1 5794 5951 -219 2238 123 0 0 chr2 30627242 30627544 -222629039 + AluSx SINE Alu 1 302 -10 2407 53 0 3 chr2 30627643 30627951 -222628632 + AluY SINE Alu 1 307 0 464 258 91 21 chr2 30628448 30628634 -222627949 + HAL1 LINE L1 2309 2507 0 909 271 51 38 chr2 30628807 30629332 -222627251 + L1MC/D LINE L1 4080 4611 -1535 1342 279 86 11 chr2 30629338 30629814 -222626769 - LTR33 LTR ERVL -2 519 8 532 274 147 30 chr2 30629828 30630524 -222626059 + L1MC/D LINE L1 4795 5577 -743 241 352 8 0 chr2 30630692 30630820 -222625763 + L2 LINE L2 2127 2255 -1059 2194 101 14 0 chr2 30631180 30631468 -222625115 + AluSc SINE Alu 1 292 -17 1905 161 0 0 chr2 30631889 30632169 -222624414 - AluJb SINE Alu -32 280 1 222 245 70 0 chr2 30632783 30632853 -222623730 - MIR SINE MIR -77 131 57 478 223 0 27 chr2 30633322 30633434 -222623149 - MER81 DNA DNA -2 112 4 990 184 32 57 chr2 30634449 30634812 -222621771 - LTR48B LTR ERV1 0 644 236 1422 225 7 77 chr2 30634946 30635364 -222621219 + L1MEc LINE L1 285 673 -5723 212 0 0 35 chr2 30635677 30635706 -222620877 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1752 92 0 17 chr2 30635715 30635954 -222620629 - AluSq SINE Alu -78 235 1 5108 77 5 5 chr2 30636348 30637008 -222619575 - PABL_A LTR ERV1 0 660 1 689 263 65 26 chr2 30637033 30637265 -222619318 + LTR16C LTR ERVL 85 325 -166 414 185 0 0 chr2 30637252 30637317 -222619266 + LTR8 LTR ERV1 619 683 -8 * 944 205 15 10 chr2 30637420 30637615 -222618968 + LTR16C LTR ERVL 296 491 0 256 308 26 0 chr2 30637646 30637724 -222618859 - MIR3 SINE MIR -18 190 111 3261 163 45 71 chr2 30638361 30638889 -222617694 + LTR8 LTR ERV1 16 524 -167 2289 88 0 3 chr2 30638889 30639202 -222617381 + AluSp SINE Alu 1 312 0 3261 163 45 71 chr2 30639202 30639366 -222617217 + LTR8 LTR ERV1 524 691 0 264 259 116 27 chr2 30639404 30639516 -222617067 + MIR SINE MIR 59 180 -82 710 235 93 20 chr2 30640619 30640823 -222615760 - LTR29 LTR ERV1 -263 359 141 284 203 63 119 chr2 30640799 30640880 -222615703 - MER34 LTR ERV1 -407 135 64 * 1781 153 3 62 chr2 30640880 30641200 -222615383 + AluJo SINE Alu 1 301 -11 284 203 63 119 chr2 30641200 30641261 -222615322 - MER34 LTR ERV1 -478 64 1 1418 146 8 4 chr2 30642041 30642280 -222614303 + MER50 LTR ERV1 1 240 -494 1716 162 65 40 chr2 30642295 30642833 -222613750 - MLT2A2 LTR ERVL 0 554 1 1263 104 4 124 chr2 30642834 30642954 -222613629 + MER50 LTR ERV1 460 593 -141 2308 91 0 13 chr2 30642954 30643261 -222613322 - AluSx SINE Alu -9 303 1 1263 104 4 124 chr2 30643261 30643315 -222613268 + MER50 LTR ERV1 593 596 -138 2200 110 33 0 chr2 30643315 30643614 -222612969 + AluSx SINE Alu 2 310 -2 1263 104 4 124 chr2 30643614 30643697 -222612886 + MER50 LTR ERV1 596 687 -47 1049 157 211 14 chr2 30644307 30644530 -222612053 + Tigger7 DNA MER2_type 1 267 -2220 1868 178 0 3 chr2 30644542 30644851 -222611732 + AluJo SINE Alu 1 308 -4 555 198 0 0 chr2 30644851 30644942 -222611641 + Tigger7 DNA MER2_type 2496 2586 -1 577 246 56 28 chr2 30645490 30645669 -222610914 - MER5A DNA MER1_type 0 189 6 2336 86 3 7 chr2 30645828 30646131 -222610452 - AluSp SINE Alu -10 303 2 298 309 57 52 chr2 30647172 30647576 -222609007 + L2 LINE L2 2867 3272 -41 232 243 118 35 chr2 30648201 30648345 -222608238 - L1ME4a LINE L1 0 6121 5966 624 223 76 24 chr2 30648446 30648689 -222607894 + MIR SINE MIR 12 262 0 702 277 63 12 chr2 30649058 30649311 -222607272 + LTR16A LTR ERVL 92 357 -93 435 148 17 43 chr2 30649310 30649425 -222607158 + LTR16A LTR ERVL 317 428 -22 * 288 301 81 32 chr2 30649429 30649615 -222606968 - L2 LINE L2 -252 3061 2867 9462 171 85 42 chr2 30649937 30651051 -222605532 + L1MDa LINE L1 18 1082 -5458 1783 156 0 42 chr2 30651051 30651358 -222605225 + AluJb SINE Alu 3 296 -16 9462 171 85 42 chr2 30651358 30652491 -222604092 + L1MDa LINE L1 1082 2362 -4178 2839 163 15 91 chr2 30652609 30652774 -222603809 + MER4E LTR ERV1 214 390 -389 2441 78 0 16 chr2 30652774 30653081 -222603502 + AluY SINE Alu 4 305 -6 2839 163 15 91 chr2 30653081 30653528 -222603055 + MER4E LTR ERV1 390 779 0 3956 167 74 49 chr2 30653653 30654187 -222602396 + L1MDa LINE L1 1470 1989 -4551 1731 166 11 14 chr2 30654187 30654470 -222602113 - AluJo SINE Alu -30 282 1 3956 167 74 49 chr2 30654470 30655026 -222601557 + L1MDa LINE L1 1989 2587 -3953 424 193 66 13 chr2 30655023 30655175 -222601408 + L1MA7 LINE L1 6003 6260 -31 * 770 158 0 43 chr2 30655237 30655376 -222601207 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr2 30655376 30655397 -222601186 + AT_rich Low_complexity Low_complexity 1 21 0 1289 199 122 16 chr2 30655476 30655787 -222600796 + MER2 DNA MER2_type 2 345 0 1960 233 18 0 chr2 30655792 30656290 -222600293 + L1MDa LINE L1 2695 3201 -3339 1233 165 0 75 chr2 30656317 30656572 -222600011 - MER46A DNA MER2_type 0 236 1 235 191 0 0 chr2 30656621 30656663 -222599920 + LTR50 LTR ERVL 1 42 -753 2370 89 10 10 chr2 30656664 30656977 -222599606 - AluSq SINE Alu 0 313 1 24 0 0 0 chr2 30659007 30659031 -222597552 + AT_rich Low_complexity Low_complexity 1 24 0 733 134 21 260 chr2 30659352 30659679 -222596904 + L1MC3 LINE L1 6683 6877 -930 1356 184 37 61 chr2 30659679 30659973 -222596610 + AluJo SINE Alu 1 287 -25 733 134 21 260 chr2 30659973 30660011 -222596572 + L1MC3 LINE L1 6877 6922 -885 463 255 65 61 chr2 30661326 30661557 -222595026 + HAL1 LINE L1 2252 2483 -24 219 253 13 0 chr2 30661581 30661656 -222594927 + A-rich Low_complexity Low_complexity 1 76 0 293 243 22 88 chr2 30661661 30661797 -222594786 - MIR3 SINE MIR 0 208 82 337 250 19 46 chr2 30662076 30662184 -222594399 + MIR SINE MIR 45 149 -113 2185 109 33 10 chr2 30662197 30662500 -222594083 + AluSg SINE Alu 1 310 0 779 114 0 100 chr2 30662520 30662660 -222593923 + FLAM_C SINE Alu 1 126 -7 198 0 0 0 chr2 30662660 30662682 -222593901 + (TA)n Simple_repeat Simple_repeat 2 23 0 361 287 9 0 chr2 30662686 30662801 -222593782 + MIR SINE MIR 137 252 -10 433 273 7 7 chr2 30663390 30663533 -222593050 + L1ME LINE L1 1025 1167 -5038 2291 202 55 36 chr2 30663618 30663668 -222592915 + L1MC4a LINE L1 7214 7262 -546 2346 139 39 42 chr2 30663668 30664100 -222592483 + MSTB1 LTR MaLR 1 431 -1 2291 202 55 36 chr2 30664100 30664632 -222591951 + L1MC4a LINE L1 7262 7807 -1 199 234 0 21 chr2 30664642 30664689 -222591894 + MIR SINE MIR 204 249 -13 525 202 9 26 chr2 30664902 30665016 -222591567 + MLT1H LTR MaLR 61 172 -377 560 270 103 33 chr2 30665016 30665383 -222591200 + L1ME LINE L1 1428 1820 -4576 304 284 65 40 chr2 30665599 30665800 -222590783 + L1ME LINE L1 2111 2316 -4080 536 298 102 43 chr2 30665820 30666667 -222589916 + L1ME LINE L1 4950 5863 -376 208 281 0 0 chr2 30666668 30666725 -222589858 - MIR SINE MIR 0 262 206 2253 102 0 10 chr2 30666730 30667033 -222589550 - AluSg1 SINE Alu -9 300 1 1879 86 4 4 chr2 30667137 30667381 -222589202 + AluSp SINE Alu 62 305 -8 316 211 234 31 chr2 30668284 30668412 -222588171 - L1MA10 LINE L1 -7 6327 6174 195 271 93 19 chr2 30668712 30668819 -222587764 - MIR SINE MIR 0 262 148 247 226 0 16 chr2 30668914 30668976 -222587607 + MER91 DNA MER1_type 1 61 -79 942 256 83 44 chr2 30669620 30669980 -222586603 + MLT1A2 LTR MaLR 1 374 0 2176 134 95 42 chr2 30670168 30670600 -222585983 - MSTB2 LTR MaLR -2 455 1 5677 149 4 22 chr2 30670800 30672637 -222583946 + L1PB1 LINE L1 4167 5965 -186 2025 146 0 19 chr2 30672677 30672992 -222583591 + AluJo SINE Alu 1 309 -3 21 0 0 0 chr2 30672992 30673013 -222583570 + AT_rich Low_complexity Low_complexity 1 21 0 180 360 129 21 chr2 30673029 30673215 -222583368 + L2 LINE L2 2771 2976 -338 775 162 28 0 chr2 30673245 30673387 -222583196 - L1MB1 LINE L1 0 6168 6023 2394 155 23 5 chr2 30673508 30673902 -222582681 - MER57A LTR ERV1 0 403 3 331 323 31 15 chr2 30673908 30674038 -222582545 + L2 LINE L2 3137 3268 -4 1179 237 93 64 chr2 30674457 30674845 -222581738 - MLT1I LTR MaLR -1 408 10 3508 143 31 31 chr2 30675471 30676046 -222580537 + Tigger4(Zombi) DNA MER2_type 1 575 -2156 3862 101 38 11 chr2 30676048 30676621 -222579962 + Tigger4(Zombi) DNA MER2_type 2143 2731 0 258 256 39 0 chr2 30676621 30676699 -222579884 - MLT1L LTR MaLR -330 285 205 2441 73 10 0 chr2 30677039 30677342 -222579241 - AluSq SINE Alu -7 306 1 373 347 40 32 chr2 30677399 30677697 -222578886 + L2 LINE L2 2764 3059 -213 282 120 0 9 chr2 30677708 30677758 -222578825 - MLT1I LTR MaLR -12 438 345 664 260 124 34 chr2 30677760 30678025 -222578558 - MLT1I LTR MaLR -23 386 98 383 305 85 34 chr2 30678189 30678425 -222578158 - MIR SINE MIR -13 249 2 233 305 59 51 chr2 30678562 30678680 -222577903 + L2 LINE L2 2966 3084 -188 425 291 178 32 chr2 30678942 30679544 -222577039 - L2 LINE L2 -96 3217 2535 578 236 199 22 chr2 30679555 30679754 -222576829 - L2 LINE L2 -961 2353 2092 1532 75 150 13 chr2 30679754 30679981 -222576602 + AluY SINE Alu 41 298 -13 578 236 199 22 chr2 30679981 30680052 -222576531 - L2 LINE L2 -1222 2092 2035 441 125 25 0 chr2 30680481 30680561 -222576022 + MER5A DNA MER1_type 108 189 0 235 333 23 0 chr2 30681127 30681214 -222575369 + MIR SINE MIR 56 144 -64 338 152 40 111 chr2 30681222 30681265 -222575318 - MER5A DNA MER1_type 0 189 145 424 279 0 0 chr2 30681265 30681376 -222575207 + MER81 DNA DNA 4 114 0 338 152 40 111 chr2 30681376 30681431 -222575152 - MER5A DNA MER1_type -44 145 98 319 245 46 97 chr2 30681507 30681600 -222574983 + MER5A DNA MER1_type 3 82 -107 2380 57 3 7 chr2 30681600 30681900 -222574683 - AluY SINE Alu -12 299 1 319 245 46 97 chr2 30681900 30682002 -222574581 + MER5A DNA MER1_type 82 188 -1 208 268 36 0 chr2 30683317 30683373 -222573210 + GA-rich Low_complexity Low_complexity 6 63 0 321 251 13 77 chr2 30685091 30685254 -222571329 + MIR SINE MIR 18 173 -68 2221 89 0 4 chr2 30685421 30685702 -222570881 + AluSq SINE Alu 1 280 -33 464 120 0 11 chr2 30685726 30685818 -222570765 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 688 157 37 30 chr2 30687204 30687327 -222569256 + BC200 scRNA scRNA 2 128 -72 2216 111 25 6 chr2 30687327 30687686 -222568897 + L1MA2 LINE L1 5939 6304 0 1882 156 0 30 chr2 30687762 30688063 -222568520 + AluJb SINE Alu 3 294 -18 211 167 0 0 chr2 30688225 30688261 -222568322 - MIR SINE MIR -170 92 57 1883 172 3 3 chr2 30689112 30689409 -222567174 + AluJb SINE Alu 1 297 -15 641 299 50 55 chr2 30689738 30690102 -222566481 - L2 LINE L2 -2 3270 2909 1681 153 0 11 chr2 30690301 30690576 -222566007 - AluJo SINE Alu -20 292 21 2173 123 0 3 chr2 30690743 30691043 -222565540 + AluSx SINE Alu 1 299 -13 763 197 11 49 chr2 30691245 30691428 -222565155 + L1ME1 LINE L1 5863 6038 -128 441 209 45 21 chr2 30691506 30691632 -222564951 + L1ME1 LINE L1 6052 6183 -1 2243 105 7 0 chr2 30692318 30692622 -222563961 + AluSx SINE Alu 1 306 -6 291 256 8 72 chr2 30692974 30693099 -222563484 - MIR SINE MIR -42 220 104 1674 164 63 7 chr2 30693109 30693395 -222563188 - AluJb SINE Alu -10 302 1 323 267 52 26 chr2 30694207 30694323 -222562260 + L1MEd LINE L1 59 177 -5942 317 268 106 39 chr2 30694542 30694721 -222561862 - MIR SINE MIR -44 218 28 22 42 0 0 chr2 30695093 30695117 -222561466 + AT_rich Low_complexity Low_complexity 1 24 0 697 134 9 7 chr2 30695117 30695350 -222561233 + AluJ SINE Alu 1 297 -15 241 209 163 7 chr2 30695512 30695665 -222560918 + L1MEd LINE L1 651 827 -5292 * 1752 233 29 57 chr2 30695655 30695962 -222560621 + L1ME2 LINE L1 5647 5935 -229 2240 96 3 0 chr2 30695962 30696275 -222560308 + AluSx SINE Alu 1 314 0 1752 233 29 57 chr2 30696275 30696490 -222560093 + L1ME2 LINE L1 5935 6155 -9 2204 100 20 3 chr2 30697558 30697857 -222558726 + AluSx SINE Alu 1 304 -8 1693 150 22 29 chr2 30697860 30698174 -222558409 - L1MA7 LINE L1 -130 6161 5850 357 111 0 0 chr2 30698174 30698234 -222558349 + L1MA7 LINE L1 6229 6291 0 2026 212 146 38 chr2 30698938 30699172 -222557411 + LTR50 LTR ERVL 52 259 -536 2245 110 7 0 chr2 30699172 30699464 -222557119 - AluSg SINE Alu -16 294 1 2026 212 146 38 chr2 30699464 30699785 -222556798 + LTR50 LTR ERVL 259 685 -110 198 0 0 0 chr2 30699785 30699807 -222556776 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2026 212 146 38 chr2 30699807 30699882 -222556701 + LTR50 LTR ERVL 685 751 -44 2216 55 136 7 chr2 30699882 30700217 -222556366 + L1PA5 LINE L1 5795 6169 0 286 213 53 107 chr2 30700218 30700283 -222556300 - L1M4 LINE L1 -1628 4518 4451 1958 136 45 45 chr2 30700283 30700615 -222555968 + MER1B DNA MER1_type 5 336 -1 286 213 53 107 chr2 30700615 30700699 -222555884 - L1M4 LINE L1 -1695 4451 4377 1610 190 68 61 chr2 30700709 30700808 -222555775 + L1M4 LINE L1 4520 4617 -1529 1989 129 0 20 chr2 30700808 30701110 -222555473 + AluJb SINE Alu 9 304 -8 1610 190 68 61 chr2 30701110 30701468 -222555115 + L1M4 LINE L1 4617 4980 -1166 2355 78 0 7 chr2 30701936 30702232 -222554351 + AluY SINE Alu 1 294 -17 384 355 87 35 chr2 30702278 30702622 -222553961 - L2 LINE L2 -13 3259 2898 1449 101 40 0 chr2 30702787 30702986 -222553597 + AluSp SINE Alu 105 311 -2 333 0 0 0 chr2 30703288 30703325 -222553258 + (TC)n Simple_repeat Simple_repeat 2 38 0 438 298 11 58 chr2 30703601 30703792 -222552791 + MER5A DNA MER1_type 2 183 -6 228 174 0 0 chr2 30704571 30704617 -222551966 - MIR SINE MIR -59 149 104 225 0 0 0 chr2 30704869 30704894 -222551689 + (A)n Simple_repeat Simple_repeat 1 25 0 1585 212 129 78 chr2 30704918 30705493 -222551090 - MER45C DNA AcHobo -349 604 1 732 142 128 0 chr2 30706092 30706233 -222550350 - L1MC1 LINE L1 -239 6094 5936 323 155 119 0 chr2 30706324 30706408 -222550175 + MIR SINE MIR 77 170 -92 438 122 0 37 chr2 30707364 30707446 -222549137 - L1MC1 LINE L1 -430 5903 5825 513 127 0 0 chr2 30707450 30707529 -222549054 - AluS SINE Alu -12 300 222 3151 123 34 23 chr2 30707529 30708084 -222548499 - LTR9B LTR ERV1 0 644 27 2449 59 3 13 chr2 30708084 30708387 -222548196 - AluY SINE Alu -11 300 1 3151 123 34 23 chr2 30708387 30708415 -222548168 - LTR9B LTR ERV1 -617 27 1 1399 139 0 10 chr2 30708421 30708629 -222547954 - AluSx SINE Alu -106 206 1 1498 212 130 39 chr2 30708673 30709159 -222547424 - LTR10B LTR ERV1 -5 542 13 1030 134 34 6 chr2 30709161 30709347 -222547236 - L1MA2 LINE L1 -473 5831 5632 231 304 63 13 chr2 30709605 30709684 -222546899 + L2 LINE L2 3138 3220 -52 214 256 77 13 chr2 30709904 30709982 -222546601 - MIR3 SINE MIR -113 95 13 2393 103 30 81 chr2 30710006 30710403 -222546180 - MER51B LTR ERV1 0 377 1 405 329 60 0 chr2 30710646 30710795 -222545788 - MIR SINE MIR -48 214 57 1583 192 12 35 chr2 30710829 30711183 -222545400 - MLT1C LTR MaLR -42 584 81 362 255 21 0 chr2 30711433 30711527 -222545056 - MLT1C LTR MaLR -371 96 1 268 287 78 23 chr2 30711670 30711799 -222544784 + MIR3 SINE MIR 50 185 -23 262 316 30 60 chr2 30712479 30712647 -222543936 - L1MC4a LINE L1 -1880 5928 5766 289 279 22 109 chr2 30713272 30713319 -222543264 - L1ME3A LINE L1 0 6170 6120 1952 186 9 0 chr2 30713319 30713664 -222542919 - MER7A DNA MER2_type 0 346 1 289 279 22 109 chr2 30713664 30713845 -222542738 - L1ME3A LINE L1 -50 6120 5962 234 0 0 0 chr2 30713903 30713929 -222542654 + (TA)n Simple_repeat Simple_repeat 1 26 0 2371 175 54 36 chr2 30714275 30714878 -222541705 - L1ME3A LINE L1 -364 5802 5189 2238 82 7 0 chr2 30714909 30715188 -222541395 - AluSq SINE Alu -32 281 1 1018 180 136 22 chr2 30715188 30715416 -222541167 - MLT1D LTR MaLR -52 453 200 4420 127 31 64 chr2 30715445 30715493 -222541090 - L1MB2 LINE L1 0 6171 6123 1519 156 7 81 chr2 30715493 30715801 -222540782 + AluJo SINE Alu 7 291 -21 4420 127 31 64 chr2 30715801 30715893 -222540690 - L1MB2 LINE L1 -48 6123 6029 2827 135 9 2 chr2 30715893 30716324 -222540259 + MER57B LTR ERV1 1 434 0 4420 127 31 64 chr2 30716324 30716993 -222539590 - L1MB2 LINE L1 -142 6029 5388 687 165 60 189 chr2 30716998 30717246 -222539337 - MLT1D LTR MaLR -289 216 1 2026 124 0 0 chr2 30717289 30717563 -222539020 + AluY SINE Alu 1 274 -37 195 42 0 0 chr2 30717567 30717591 -222538992 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1663 193 42 20 chr2 30717792 30718149 -222538434 + MLT1A1 LTR MaLR 1 365 0 357 43 0 0 chr2 30718214 30718261 -222538322 + (CA)n Simple_repeat Simple_repeat 2 48 0 868 144 0 8 chr2 30719122 30719254 -222537329 + FLAM_C SINE Alu 1 131 -12 341 292 36 18 chr2 30719463 30719631 -222536952 + L1ME1 LINE L1 3805 3975 -2171 2482 80 0 6 chr2 30719710 30720021 -222536562 + AluSc SINE Alu 1 309 0 235 245 20 59 chr2 30720021 30720123 -222536460 + L1ME1 LINE L1 4160 4257 -1889 2334 111 14 72 chr2 30720203 30720617 -222535966 - MLT1B LTR MaLR 0 390 1 268 283 17 92 chr2 30720689 30720862 -222535721 + L1ME1 LINE L1 4460 4619 -1527 639 169 52 1 chr2 30721247 30721387 -222535196 + MIR SINE MIR 75 219 -43 22 35 0 0 chr2 30721391 30721420 -222535163 + AT_rich Low_complexity Low_complexity 1 29 0 330 273 32 111 chr2 30721525 30721637 -222534946 + L1ME1 LINE L1 5681 5764 -357 2213 113 0 0 chr2 30721637 30721929 -222534654 + AluSx SINE Alu 1 292 -20 330 273 32 111 chr2 30721929 30722069 -222534514 + L1ME1 LINE L1 5764 5913 -208 2407 77 3 0 chr2 30722262 30722560 -222534023 + AluSg SINE Alu 1 299 -11 31 44 0 0 chr2 30724103 30724148 -222532435 + GC_rich Low_complexity Low_complexity 1 45 0 26 30 0 0 chr2 30724281 30724314 -222532269 + GC_rich Low_complexity Low_complexity 1 33 0 200 91 0 30 chr2 30724647 30724680 -222531903 + (CCG)n Simple_repeat Simple_repeat 2 33 0 485 211 149 40 chr2 30727087 30727299 -222529284 - MIR SINE MIR -7 255 24 1087 218 109 14 chr2 30727584 30727869 -222528714 - MER58B DNA MER1_type -8 333 22 663 262 26 19 chr2 30728725 30728972 -222527611 + L1ME1 LINE L1 5927 6161 -5 210 316 105 0 chr2 30729486 30729600 -222526983 + MIR SINE MIR 129 254 -8 2427 74 6 10 chr2 30729690 30730002 -222526581 - AluY SINE Alu 0 311 1 1095 179 262 3 chr2 30730025 30730315 -222526268 - MLT1A1 LTR MaLR 0 365 1 416 281 130 44 chr2 30731138 30731408 -222525175 - MER102b DNA MER1_type 0 341 49 2330 105 0 0 chr2 30731544 30731839 -222524744 - AluSx SINE Alu -17 295 1 198 264 127 36 chr2 30732739 30732849 -222523734 + MIR SINE MIR 74 193 -69 2368 92 0 0 chr2 30733803 30734097 -222522486 + AluSg SINE Alu 1 294 -16 814 216 43 0 chr2 30734652 30734814 -222521769 + MER58A DNA MER1_type 42 210 -14 22 0 0 0 chr2 30737663 30737685 -222518898 + AT_rich Low_complexity Low_complexity 1 22 0 225 253 84 53 chr2 30738584 30738679 -222517904 - MER5A DNA MER1_type -22 167 70 207 88 0 0 chr2 30738682 30738716 -222517867 + (T)n Simple_repeat Simple_repeat 1 34 0 914 223 116 37 chr2 30738744 30738986 -222517597 + MER21B LTR ERV1 3 263 -600 5039 170 51 11 chr2 30739029 30739971 -222516612 + MER4B-int LTR ERV1 3079 4058 -2700 2299 107 0 3 chr2 30740226 30740534 -222516049 + AluSg SINE Alu 1 307 -3 262 200 43 29 chr2 30740545 30740615 -222515968 + MIR SINE MIR 73 143 -65 26 30 0 0 chr2 30741874 30741907 -222514676 + AT_rich Low_complexity Low_complexity 1 33 0 329 257 76 0 chr2 30743323 30743428 -222513155 - MIR3 SINE MIR -48 160 48 926 221 14 5 chr2 30743510 30743732 -222512851 + MIR SINE MIR 9 232 -30 193 277 62 62 chr2 30744014 30744031 -222512552 - MIR SINE MIR -50 212 196 827 204 44 0 chr2 30744031 30744212 -222512371 - MER5A DNA MER1_type 0 189 1 193 277 62 62 chr2 30744212 30744324 -222512259 - MIR SINE MIR -65 197 83 732 199 24 6 chr2 30745031 30745197 -222511386 + MER5B DNA MER1_type 10 178 0 374 143 13 0 chr2 30745233 30745310 -222511273 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 312 367 38 9 chr2 30745417 30745627 -222510956 - L2 LINE L2 -463 2851 2636 238 206 0 48 chr2 30745770 30745833 -222510750 - MIR3 SINE MIR -135 73 14 843 134 0 22 chr2 30746055 30746189 -222510394 - FLAM_C SINE Alu -2 131 1 891 100 0 50 chr2 30746548 30746721 -222509862 - FLAM_C SINE Alu 0 166 1 205 281 288 13 chr2 30746890 30747043 -222509540 + MER91A DNA MER1_type 1 195 -1 476 239 35 1 chr2 30747085 30747216 -222509367 + MIR SINE MIR 4 137 -71 439 244 65 75 chr2 30747290 30747360 -222509223 + MIR SINE MIR 49 118 -144 2330 95 0 19 chr2 30747360 30747675 -222508908 - AluSc SINE Alu 0 309 1 439 244 65 75 chr2 30747675 30747805 -222508778 + MIR SINE MIR 118 247 -15 885 190 76 0 chr2 30747899 30747989 -222508594 + MLT1F LTR MaLR 345 427 -115 1857 169 54 23 chr2 30747989 30748343 -222508240 - MLT1A1 LTR MaLR 0 365 1 885 190 76 0 chr2 30748343 30748436 -222508147 + MLT1F LTR MaLR 427 542 0 2362 63 20 13 chr2 30748456 30748759 -222507824 + AluY SINE Alu 1 305 -6 205 136 68 23 chr2 30750268 30750312 -222506271 + L2 LINE L2 3265 3310 -3 250 250 0 0 chr2 30750383 30750443 -222506140 - L2 LINE L2 -4 3309 3250 1943 166 3 3 chr2 30750810 30751117 -222505466 - AluJb SINE Alu -5 307 1 767 224 13 0 chr2 30751801 30751953 -222504630 + MER45A DNA AcHobo 24 177 -1 397 256 29 39 chr2 30751953 30752133 -222504450 - MIR SINE MIR -63 145 12 23 54 0 0 chr2 30752433 30752470 -222504113 + AT_rich Low_complexity Low_complexity 1 37 0 359 274 212 6 chr2 30752807 30753000 -222503583 + MIR SINE MIR 31 261 -1 740 241 7 0 chr2 30753170 30753315 -222503268 + MER63A DNA MER1_type 53 198 -12 405 305 36 45 chr2 30753337 30753573 -222503010 + MIR SINE MIR 30 259 -3 2333 107 0 3 chr2 30753714 30754023 -222502560 - AluSg SINE Alu 0 310 3 602 250 100 5 chr2 30754401 30754601 -222501982 + MIR SINE MIR 36 254 -8 359 151 125 21 chr2 30755293 30755395 -222501188 + L1MC/D LINE L1 5717 5827 -304 2018 175 31 6 chr2 30756267 30756622 -222499961 - MLT1A1 LTR MaLR -1 364 1 1506 244 141 32 chr2 30756973 30757505 -222499078 - MLT1G3 LTR MaLR 0 590 1 291 289 10 10 chr2 30757988 30758092 -222498491 + MIR SINE MIR 101 204 -58 1183 150 10 25 chr2 30758423 30758606 -222497977 - AluSg/x SINE Alu -11 301 120 1502 114 0 10 chr2 30758606 30758808 -222497775 - AluSx SINE Alu -112 200 1 1183 150 10 25 chr2 30758808 30758824 -222497759 - AluSg/x SINE Alu -192 120 105 2276 81 7 7 chr2 30759238 30759557 -222497026 - AluSp SINE Alu 0 319 1 5913 218 40 29 chr2 30759849 30761602 -222494981 + L1MD1 LINE L1 2117 4385 -1761 2283 104 0 7 chr2 30761602 30761900 -222494683 + AluSx SINE Alu 1 296 -16 5913 218 40 29 chr2 30761900 30762055 -222494528 + L1MD1 LINE L1 4385 4537 -1609 1086 196 18 9 chr2 30762060 30762284 -222494299 + L1MD1 LINE L1 5603 5828 -414 963 128 13 13 chr2 30762284 30762421 -222494162 + AluSg/x SINE Alu 145 284 -28 961 101 0 13 chr2 30762421 30762580 -222494003 + (GGAA)n Simple_repeat Simple_repeat 3 159 0 963 128 13 13 chr2 30762580 30762591 -222493992 + AluSg/x SINE Alu 283 293 -19 1472 163 70 20 chr2 30762591 30762891 -222493692 + L1MD1 LINE L1 5819 6133 -109 1685 164 47 0 chr2 30763099 30763253 -222493330 - AluJb SINE Alu -24 288 114 216 0 0 0 chr2 30763253 30763277 -222493306 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1685 164 47 0 chr2 30763277 30763397 -222493186 - AluJb SINE Alu -198 114 1 397 307 132 27 chr2 30763476 30763847 -222492736 - L1MC4a LINE L1 -1898 5910 5501 701 154 0 8 chr2 30764255 30764372 -222492211 + FLAM_C SINE Alu 1 116 -17 21 36 0 0 chr2 30764372 30764400 -222492183 + AT_rich Low_complexity Low_complexity 1 28 0 532 321 9 5 chr2 30764779 30764994 -222491589 + LTR16B LTR ERVL 246 461 -3 277 263 53 0 chr2 30765125 30765201 -222491382 + MIR3 SINE MIR 99 178 -30 28 0 0 0 chr2 30765489 30765517 -222491066 + AT_rich Low_complexity Low_complexity 1 28 0 734 145 0 8 chr2 30765517 30765634 -222490949 - FLAM_C SINE Alu -17 116 1 1860 113 3 80 chr2 30765870 30766181 -222490402 + AluSx SINE Alu 2 288 -24 33 66 0 0 chr2 30766329 30766390 -222490193 + AT_rich Low_complexity Low_complexity 1 61 0 556 282 194 41 chr2 30766477 30767363 -222489220 + L2 LINE L2 2283 3312 -1 1994 130 40 13 chr2 30767384 30767684 -222488899 - AluJb SINE Alu -4 308 1 495 299 69 15 chr2 30767728 30767989 -222488594 - L1MC4a LINE L1 -1921 5887 5613 2557 64 0 0 chr2 30768211 30768508 -222488075 + AluY SINE Alu 1 297 -14 626 291 25 45 chr2 30768534 30768625 -222487958 + MIR SINE MIR 3 94 -168 3142 132 43 61 chr2 30768625 30769247 -222487336 - LTR36 LTR ERV1 0 611 1 626 291 25 45 chr2 30769247 30769399 -222487184 + MIR SINE MIR 94 241 -21 279 269 21 43 chr2 30771202 30771295 -222485288 + MLT1K LTR MaLR 477 567 -21 682 152 9 0 chr2 30771813 30771918 -222484665 - Tigger7 DNA MER2_type 0 2487 2382 703 142 49 195 chr2 30771919 30772124 -222484459 - Tigger7 DNA MER2_type -499 234 60 1351 164 102 58 chr2 30773058 30773122 -222483461 - MLT1D LTR MaLR 0 505 445 2301 100 3 0 chr2 30773122 30773423 -222483160 - AluSx SINE Alu -10 302 1 1351 164 102 58 chr2 30773423 30773651 -222482932 - MLT1D LTR MaLR -60 445 200 3209 123 21 34 chr2 30773680 30773728 -222482855 - L1MB2 LINE L1 0 6171 6124 1597 163 3 75 chr2 30773728 30774035 -222482548 + AluJo SINE Alu 7 291 -21 3209 123 21 34 chr2 30774035 30774127 -222482456 - L1MB2 LINE L1 -47 6124 6032 2827 135 9 2 chr2 30774127 30774558 -222482025 + MER57B LTR ERV1 1 434 0 3209 123 21 34 chr2 30774558 30774951 -222481632 - L1MB2 LINE L1 -139 6032 5644 253 274 44 53 chr2 30775540 30775606 -222480977 + MIR3 SINE MIR 86 152 -56 2225 129 0 3 chr2 30775606 30775908 -222480675 + AluSx SINE Alu 1 301 -11 253 274 44 53 chr2 30775908 30775954 -222480629 + MIR3 SINE MIR 152 197 -11 627 152 38 0 chr2 30776336 30776441 -222480142 + MLT1D LTR MaLR 345 453 -52 * 861 187 20 0 chr2 30776419 30776569 -222480014 - MLT1A1 LTR MaLR -28 337 185 564 243 102 69 chr2 30776845 30776909 -222479674 - L1MC5 LINE L1 -86 7875 7815 1683 170 2 88 chr2 30776909 30777308 -222479275 + MLT1A1 LTR MaLR 1 365 0 564 243 102 69 chr2 30777308 30777647 -222478936 - L1MC5 LINE L1 -146 7815 7459 1728 274 106 12 chr2 30777806 30778371 -222478212 - MLT2F LTR ERVL 0 663 46 2194 132 0 3 chr2 30778747 30779051 -222477532 - AluSg SINE Alu -7 303 1 205 209 23 105 chr2 30779156 30779242 -222477341 - MIR SINE MIR 0 262 184 847 199 144 34 chr2 30779461 30779697 -222476886 + MLT1H LTR MaLR 78 339 -210 995 226 78 68 chr2 30780026 30780512 -222476071 - L1ME4a LINE L1 -38 6083 5593 2285 125 0 3 chr2 30781427 30781738 -222474845 + AluSx SINE Alu 1 310 -2 290 346 46 0 chr2 30781866 30782019 -222474564 + MIR SINE MIR 73 232 -30 1962 153 20 3 chr2 30783514 30783809 -222472774 - AluSx SINE Alu -12 300 1 390 302 0 9 chr2 30784013 30784119 -222472464 - MER5B DNA MER1_type -72 106 2 366 302 69 0 chr2 30784179 30784295 -222472288 - L2 LINE L2 -8 3264 3141 1982 138 0 0 chr2 30784759 30785098 -222471485 - AluSx SINE Alu 0 345 7 328 232 14 0 chr2 30785527 30785596 -222470987 - MLT1L LTR MaLR -374 241 172 789 163 77 77 chr2 30785614 30785694 -222470889 + MER106A DNA MER1_type 1 80 -156 2090 134 0 3 chr2 30785694 30785985 -222470598 + AluSx SINE Alu 2 291 -21 789 163 77 77 chr2 30785985 30786113 -222470470 + MER106A DNA MER1_type 79 209 -27 204 277 277 0 chr2 30786625 30786719 -222469864 + L2 LINE L2 3139 3258 -14 234 62 0 0 chr2 30786725 30786757 -222469826 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 223 309 12 12 chr2 30786760 30786844 -222469739 + MIR SINE MIR 23 108 -100 1468 179 65 17 chr2 30787203 30787372 -222469211 - AluJo SINE Alu -8 304 114 198 0 0 0 chr2 30787372 30787394 -222469189 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1468 179 65 17 chr2 30787394 30787514 -222469069 - AluJo SINE Alu -198 114 1 22 35 0 0 chr2 30788123 30788152 -222468431 + AT_rich Low_complexity Low_complexity 1 29 0 2659 51 0 6 chr2 30788170 30788482 -222468101 - AluY SINE Alu -1 310 1 852 163 0 15 chr2 30788694 30788829 -222467754 + FLAM_C SINE Alu 1 133 0 330 67 0 0 chr2 30788857 30788902 -222467681 + (CA)n Simple_repeat Simple_repeat 2 46 0 619 250 12 17 chr2 30788912 30789084 -222467499 - MER5B DNA MER1_type -7 171 1 293 274 22 97 chr2 30789676 30789723 -222466860 - L1ME3A LINE L1 0 6170 6121 2030 177 9 0 chr2 30789723 30790068 -222466515 - MER7A DNA MER2_type 0 346 1 293 274 22 97 chr2 30790068 30790246 -222466337 - L1ME3A LINE L1 -49 6121 5962 237 83 0 0 chr2 30790304 30790340 -222466243 + (TA)n Simple_repeat Simple_repeat 1 36 0 280 253 76 0 chr2 30790370 30790449 -222466134 - L1ME3A LINE L1 -665 5499 5415 276 280 42 56 chr2 30790458 30790601 -222465982 - MIR3 SINE MIR -4 204 64 207 246 116 0 chr2 30790755 30790824 -222465759 + MIR SINE MIR 27 103 -159 1048 154 53 14 chr2 30790824 30791032 -222465551 + MLT2C2 LTR ERVL 1 216 -248 2506 108 24 16 chr2 30791494 30791866 -222464717 + THE1C LTR MaLR 1 375 0 299 318 8 8 chr2 30792191 30792317 -222464266 - MIR3 SINE MIR -30 178 53 1104 188 122 41 chr2 30792762 30793136 -222463447 - LTR37A LTR ERV1 0 426 17 2202 81 7 45 chr2 30793136 30793444 -222463139 - AluSx SINE Alu -16 296 1 1104 188 122 41 chr2 30793444 30793463 -222463120 - LTR37A LTR ERV1 -409 17 1 2126 124 0 0 chr2 30794914 30795232 -222461351 + AluSx SINE Alu 1 318 0 582 94 12 0 chr2 30795232 30795317 -222461266 + L1MC2 LINE L1 6110 6195 -149 2560 110 3 43 chr2 30796024 30796092 -222460491 - THE1C LTR MaLR 0 375 306 2437 71 0 0 chr2 30796092 30796387 -222460196 - AluY SINE Alu -16 295 1 2560 110 3 43 chr2 30796387 30796709 -222459874 - THE1C LTR MaLR -69 306 1 579 103 23 0 chr2 30796937 30797024 -222459559 + MER3 DNA MER1_type 21 109 -100 993 199 0 6 chr2 30797024 30797200 -222459383 + AluJb SINE Alu 130 304 -8 42 48 0 0 chr2 30797239 30797302 -222459281 + AT_rich Low_complexity Low_complexity 1 63 0 240 324 33 19 chr2 30798134 30798319 -222458264 + MIR SINE MIR 37 228 -34 3455 234 111 36 chr2 30799717 30800652 -222455931 - L1MEc LINE L1 -4104 2292 1192 2396 93 0 0 chr2 30800652 30800953 -222455630 - AluY SINE Alu -10 301 1 3455 234 111 36 chr2 30800953 30801581 -222455002 - L1MEc LINE L1 -5204 1192 612 298 325 6 0 chr2 30802989 30803155 -222453428 + HAL1 LINE L1 1373 1539 -968 857 147 0 22 chr2 30803160 30803296 -222453287 + FLAM_C SINE Alu 1 133 0 349 295 133 12 chr2 30803545 30803877 -222452706 + L1ME4a LINE L1 3198 3569 -2577 2134 155 0 0 chr2 30803882 30804192 -222452391 + AluSg SINE Alu 1 310 0 1089 82 62 0 chr2 30804481 30804627 -222451956 + AluSp SINE Alu 149 303 -10 1700 142 58 88 chr2 30804893 30804943 -222451640 + MSTB1 LTR MaLR 1 51 -381 2548 57 0 0 chr2 30804943 30805239 -222451344 - AluY SINE Alu -15 296 1 1700 142 58 88 chr2 30805239 30805633 -222450950 + MSTB1 LTR MaLR 51 432 0 1845 147 28 7 chr2 30806192 30806477 -222450106 + AluJo SINE Alu 1 291 -21 877 107 7 7 chr2 30806514 30806664 -222449919 + (GGAGA)n Simple_repeat Simple_repeat 2 151 0 254 292 56 54 chr2 30806675 30806905 -222449678 + L1ME4a LINE L1 4739 4969 -1177 216 288 138 18 chr2 30807724 30807835 -222448748 + MIR SINE MIR 29 151 -66 2045 94 73 7 chr2 30808690 30808978 -222447605 + AluSx SINE Alu 1 307 -5 231 182 61 121 chr2 30809116 30809215 -222447368 - MIR3 SINE MIR -20 188 96 1428 161 0 0 chr2 30810254 30810472 -222446111 + AluJo SINE Alu 6 223 -89 2087 135 0 7 chr2 30810811 30811114 -222445469 + AluJb SINE Alu 1 301 -11 572 271 31 10 chr2 30811796 30811988 -222444595 + L1ME4a LINE L1 5579 5774 -347 517 202 202 25 chr2 30811994 30812221 -222444362 + L1ME4a LINE L1 5825 6099 -22 2262 105 3 0 chr2 30812221 30812517 -222444066 + AluSx SINE Alu 1 297 -15 517 202 202 25 chr2 30812517 30812532 -222444051 + L1ME4a LINE L1 6099 6110 -11 283 239 158 83 chr2 30812605 30812965 -222443618 + L1ME4a LINE L1 5645 6031 -90 2238 117 0 13 chr2 30813000 30813316 -222443267 + AluSq SINE Alu 1 312 -1 25 51 0 0 chr2 30813372 30813411 -222443172 + AT_rich Low_complexity Low_complexity 1 39 0 382 301 0 23 chr2 30816219 30816352 -222440231 - MER94 DNA DNA -1 133 4 284 269 48 0 chr2 30817436 30817540 -222439043 - MIR SINE MIR -122 140 32 331 265 53 37 chr2 30818244 30818422 -222438161 - L1MC/D LINE L1 -322 5833 5702 372 240 188 19 chr2 30819685 30819839 -222436744 - MER5A DNA MER1_type 0 189 10 265 270 0 50 chr2 30819947 30820047 -222436536 - MIR SINE MIR -64 198 104 244 355 32 26 chr2 30821739 30821894 -222434689 + MIR3 SINE MIR 24 179 -29 817 322 44 6 chr2 30821978 30822320 -222434263 + LTR16A LTR ERVL 1 355 -95 2402 68 10 7 chr2 30823636 30823945 -222432638 + AluSq SINE Alu 1 310 -3 402 259 19 0 chr2 30824245 30824353 -222432230 + L2 LINE L2 3160 3269 -3 224 293 154 0 chr2 30824372 30824495 -222432088 - L2 LINE L2 -235 3037 2896 759 52 0 0 chr2 30825348 30825444 -222431139 + (TTCC)n Simple_repeat Simple_repeat 1 96 0 359 279 56 39 chr2 30827458 30827691 -222428892 - HAL1 LINE L1 0 2507 2271 1029 292 100 48 chr2 30827692 30828501 -222428082 - HAL1 LINE L1 -1639 868 18 933 130 0 0 chr2 30828802 30828933 -222427650 + FLAM_C SINE Alu 1 131 -2 557 294 27 0 chr2 30829703 30829890 -222426693 + L1M4 LINE L1 4742 4933 -1213 257 111 200 0 chr2 30830371 30830416 -222426167 - MLT1I LTR MaLR -9 400 347 692 245 19 0 chr2 30830557 30830712 -222425871 - MLT1I LTR MaLR -251 158 1 955 252 168 52 chr2 30830948 30832165 -222424418 - L1ME3A LINE L1 -217 5953 4610 626 256 70 62 chr2 30832635 30832827 -222423756 + MIR SINE MIR 3 199 -63 2272 106 0 3 chr2 30832827 30833128 -222423455 + AluSg SINE Alu 1 300 -10 626 256 70 62 chr2 30833128 30833193 -222423390 + MIR SINE MIR 199 262 0 208 284 49 25 chr2 30833413 30833494 -222423089 - L3 LINE CR1 -1 1576 1494 22028 142 63 15 chr2 30834657 30839101 -222417482 - L1 LINE L1 -2882 4683 20 310 306 8 25 chr2 30839105 30839226 -222417357 - MIR SINE MIR -111 151 33 398 280 35 14 chr2 30839538 30839681 -222416902 - MIR SINE MIR -11 251 106 1191 256 40 54 chr2 30839700 30840294 -222416289 + L1M4 LINE L1 3672 4257 -1889 2402 68 3 17 chr2 30840315 30840611 -222415972 + AluSp SINE Alu 13 304 -9 2560 44 29 3 chr2 30841038 30841353 -222415230 - L1PA7 LINE L1 -33 6121 5799 2028 119 11 4 chr2 30841407 30841721 -222414862 + AluSx SINE Alu 7 322 0 228 170 27 107 chr2 30841768 30841812 -222414771 + L1M4 LINE L1 4344 4390 -1756 2125 118 6 10 chr2 30841812 30842092 -222414491 + AluSx SINE Alu 1 281 -31 180 0 0 0 chr2 30842092 30842112 -222414471 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2125 118 6 10 chr2 30842112 30842144 -222414439 + AluSx SINE Alu 281 312 0 228 170 27 107 chr2 30842144 30842211 -222414372 + L1M4 LINE L1 4390 4446 -1700 766 236 134 86 chr2 30842302 30842780 -222413803 - HAL1 LINE L1 -2005 502 2 658 264 26 0 chr2 30843405 30843598 -222412985 + MIR SINE MIR 63 260 -2 517 159 206 0 chr2 30843840 30843947 -222412636 + L2 LINE L2 3185 3313 0 665 217 37 16 chr2 30844292 30844481 -222412102 - MIR SINE MIR -50 212 20 29 28 0 0 chr2 30844996 30845032 -222411551 + AT_rich Low_complexity Low_complexity 1 36 0 2072 130 0 3 chr2 30845032 30845325 -222411258 - AluSx SINE Alu -20 292 1 525 111 0 0 chr2 30845345 30845417 -222411166 - tRNA-Arg-CGC tRNA tRNA -4 72 1 211 356 11 0 chr2 30846575 30846662 -222409921 + L2 LINE L2 2594 2681 -633 1335 222 116 43 chr2 30846675 30847098 -222409485 - LTR16A1 LTR ERVL -3 454 1 2382 82 0 0 chr2 30847395 30847688 -222408895 - AluY SINE Alu -18 293 1 326 256 0 50 chr2 30849065 30849186 -222407397 - MIR SINE MIR -14 248 134 643 207 69 7 chr2 30849930 30850075 -222406508 + MER5B DNA MER1_type 3 156 -22 978 230 174 17 chr2 30850174 30850535 -222406048 - MER57B LTR ERV1 0 434 17 536 294 71 6 chr2 30852559 30852729 -222403854 + MIR SINE MIR 2 182 -80 1128 223 52 25 chr2 30853434 30853797 -222402786 + L1M4 LINE L1 2796 3168 -2978 1206 235 28 10 chr2 30853800 30854089 -222402494 + L1ME1 LINE L1 5738 6031 -135 23 0 0 0 chr2 30854127 30854150 -222402433 + AT_rich Low_complexity Low_complexity 1 23 0 230 224 0 0 chr2 30854535 30854584 -222401999 + (CA)n Simple_repeat Simple_repeat 2 50 0 406 279 110 23 chr2 30855014 30855315 -222401268 + L1ME4a LINE L1 5625 5951 -170 24 32 0 0 chr2 30855363 30855394 -222401189 + AT_rich Low_complexity Low_complexity 1 31 0 878 265 175 30 chr2 30855603 30856044 -222400539 - MLT1D LTR MaLR 0 505 1 2033 142 16 0 chr2 30856059 30856362 -222400221 - AluSg SINE Alu -2 308 1 257 262 155 0 chr2 30857011 30857114 -222399469 + MER5A DNA MER1_type 71 189 0 449 319 38 6 chr2 30857671 30857831 -222398752 - L2 LINE L2 0 3313 3149 634 168 62 95 chr2 30858346 30858525 -222398058 + MLT1E2 LTR MaLR 31 203 -423 * 714 213 79 0 chr2 30858500 30858664 -222397919 + MLT1E2 LTR MaLR 450 626 0 2330 100 10 0 chr2 30858687 30858988 -222397595 - AluSx SINE Alu -8 304 1 209 184 0 0 chr2 30859104 30859142 -222397441 + L3b LINE CR1 1545 1582 -1 309 172 94 66 chr2 30859439 30859587 -222396996 - MIR SINE MIR -64 144 17 255 308 0 0 chr2 30861311 30861376 -222395207 + MIR SINE MIR 40 104 -104 198 307 166 25 chr2 30861484 30861647 -222394936 + MIR SINE MIR 23 208 -54 700 297 30 22 chr2 30861648 30861880 -222394703 + L2 LINE L2 3077 3310 -3 799 165 24 94 chr2 30861908 30862120 -222394463 - MER58A DNA MER1_type -25 199 3 307 324 70 5 chr2 30862228 30862441 -222394142 + LTR33 LTR ERVL 38 264 -257 538 250 20 26 chr2 30862459 30862611 -222393972 + LTR33 LTR ERVL 371 521 0 382 322 13 0 chr2 30862844 30862975 -222393608 + MIR SINE MIR 18 152 -65 256 115 0 33 chr2 30862982 30863043 -222393540 + (TA)n Simple_repeat Simple_repeat 1 59 0 456 72 0 0 chr2 30863957 30864026 -222392557 + (CA)n Simple_repeat Simple_repeat 2 70 0 2242 113 0 7 chr2 30864935 30865236 -222391347 - AluSx SINE Alu -13 299 1 364 350 35 0 chr2 30865241 30865384 -222391199 + MIR SINE MIR 54 201 -61 1966 148 3 3 chr2 30865575 30865866 -222390717 - AluJb SINE Alu -21 291 1 634 298 31 11 chr2 30866304 30866495 -222390088 + MIR3 SINE MIR 8 202 -6 232 296 43 52 chr2 30866484 30866599 -222389984 + MIR SINE MIR 90 203 -59 * 430 255 0 0 chr2 30866689 30866787 -222389796 + MIR SINE MIR 49 146 -62 2175 100 21 4 chr2 30866951 30867272 -222389311 - AluSq SINE Alu 0 326 1 251 320 0 27 chr2 30869380 30869455 -222387128 + L3 LINE CR1 877 949 -628 4724 179 62 80 chr2 30869597 30870499 -222386084 + Charlie1a DNA MER1_type 42 910 -1851 1730 164 27 10 chr2 30870499 30870791 -222385792 + AluJo SINE Alu 1 297 -15 4724 179 62 80 chr2 30870791 30871328 -222385255 + Charlie1a DNA MER1_type 910 1455 0 2110 135 20 0 chr2 30871362 30871659 -222384924 + AluSx SINE Alu 1 303 -9 197 314 41 87 chr2 30871663 30871835 -222384748 + L3 LINE CR1 1175 1338 -239 447 272 72 14 chr2 30871845 30872010 -222384573 - MIR SINE MIR -61 147 8 242 351 101 7 chr2 30872003 30872151 -222384432 + L3 LINE CR1 1416 1577 0 * 1136 175 112 32 chr2 30872252 30872691 -222383892 - Charlie2 DNA MER1_type -129 2733 2260 2048 134 10 13 chr2 30872694 30872999 -222383584 - AluJo SINE Alu -8 304 1 184 269 30 60 chr2 30873545 30873612 -222382971 - L3 LINE CR1 -225 1352 1288 2128 155 104 34 chr2 30873646 30874118 -222382465 - MLT1D LTR MaLR 0 505 1 2591 66 0 0 chr2 30874128 30874433 -222382150 - AluY SINE Alu -6 305 1 2478 90 3 0 chr2 30874441 30874751 -222381832 - AluSp SINE Alu -2 311 1 987 261 55 0 chr2 30874753 30874991 -222381592 - MIR SINE MIR -1 261 11 433 331 49 16 chr2 30875284 30875468 -222381115 + L2 LINE L2 2855 3044 -269 328 290 48 8 chr2 30875780 30875904 -222380679 - MIR SINE MIR -87 175 47 3119 201 41 10 chr2 30876126 30876706 -222379877 - L1M4 LINE L1 -1202 4944 4335 2198 50 36 0 chr2 30876706 30876987 -222379596 - L1PA8 LINE L1 0 6172 5882 3119 201 41 10 chr2 30876987 30877134 -222379449 - L1M4 LINE L1 -1811 4335 4194 279 301 68 25 chr2 30877423 30877586 -222378997 + L2 LINE L2 2570 2739 -575 192 233 47 0 chr2 30877918 30877961 -222378622 + L2 LINE L2 3263 3307 -6 201 121 0 0 chr2 30880463 30880496 -222376087 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 199 259 0 0 chr2 30880918 30880972 -222375611 - L2 LINE L2 -22 3250 3197 2119 106 3 32 chr2 30881441 30881752 -222374831 + AluY SINE Alu 1 302 -9 420 278 0 9 chr2 30882256 30882364 -222374219 - MIR3 SINE MIR -33 175 69 182 327 18 0 chr2 30883198 30883253 -222373330 - MIR SINE MIR -135 73 18 192 143 95 0 chr2 30883284 30883326 -222373257 - MIR SINE MIR -117 145 100 1699 75 0 5 chr2 30883989 30884203 -222372380 + AluSg/x SINE Alu 90 302 -8 25 31 0 0 chr2 30887382 30887414 -222369169 + AT_rich Low_complexity Low_complexity 1 32 0 610 295 49 31 chr2 30888300 30888524 -222368059 - MIR SINE MIR -1 261 34 554 254 0 36 chr2 30889762 30889927 -222366656 - MER112 DNA MER1_type -101 159 1 2245 139 93 15 chr2 30890876 30891272 -222365311 - MSTA LTR MaLR -1 427 1 1573 228 45 37 chr2 30891518 30892009 -222364574 + Charlie4a DNA MER1_type 7 501 -7 334 257 9 19 chr2 30892442 30892547 -222364036 + MER81 DNA DNA 2 105 -9 6325 66 12 3 chr2 30892749 30893522 -222363061 + LTR17 LTR ERV1 1 780 0 649 221 134 0 chr2 30893579 30893796 -222362787 - L1ME3 LINE L1 -5 6157 5912 198 250 0 58 chr2 30894003 30894055 -222362528 - MIR SINE MIR -111 97 49 731 231 23 8 chr2 30894208 30894383 -222362200 + MER5B DNA MER1_type 2 186 -3 441 235 183 20 chr2 30894390 30894446 -222362137 - MER5A DNA MER1_type -6 183 137 2509 55 0 45 chr2 30894446 30894758 -222361825 + AluY SINE Alu 1 298 -13 441 235 183 20 chr2 30894758 30894854 -222361729 - MER5A DNA MER1_type -52 137 6 2163 215 38 14 chr2 30895694 30896151 -222360432 + MLT2B1 LTR ERVL 1 472 -48 213 39 0 0 chr2 30896151 30896177 -222360406 + (TG)n Simple_repeat Simple_repeat 2 27 0 2163 215 38 14 chr2 30896177 30896216 -222360367 + MLT2B1 LTR ERVL 472 509 -11 507 234 91 63 chr2 30896521 30896696 -222359887 + MIR SINE MIR 14 193 -69 2512 63 0 0 chr2 30897972 30898274 -222358309 - AluY SINE Alu -9 302 1 893 103 48 0 chr2 30898983 30899129 -222357454 - L1MB4 LINE L1 0 6180 6028 1701 197 6 3 chr2 30899132 30899487 -222357096 - L1MB4 LINE L1 -215 5965 5610 2593 77 0 0 chr2 30899487 30899798 -222356785 - AluY SINE Alu 0 311 1 304 145 58 29 chr2 30899944 30900013 -222356570 + MER96 DNA MER1_type? 1 71 -104 698 179 166 64 chr2 30900038 30900273 -222356310 - ORSL DNA AcHobo -8 267 9 665 262 0 0 chr2 30900305 30900454 -222356129 - MER96 DNA MER1_type? -24 151 3 516 179 125 9 chr2 30900991 30901103 -222355480 - L2 LINE L2 -4 3309 3185 529 260 66 48 chr2 30901212 30901439 -222355144 - L2 LINE L2 -123 3190 2960 1917 248 59 33 chr2 30901653 30902229 -222354354 + MLT1E LTR MaLR 3 593 0 954 297 148 65 chr2 30902274 30903243 -222353340 + L2 LINE L2 1212 2286 -1028 2291 107 3 7 chr2 30903243 30903552 -222353031 - AluSx SINE Alu -4 308 1 954 297 148 65 chr2 30903552 30903696 -222352887 + L2 LINE L2 2286 2417 -897 391 209 19 0 chr2 30903836 30903941 -222352642 + CT-rich Low_complexity Low_complexity 2 108 0 613 242 16 71 chr2 30903968 30904006 -222352577 + MER5B DNA MER1_type 7 46 -132 2577 43 0 23 chr2 30904006 30904309 -222352274 + AluY SINE Alu 1 296 -15 613 242 16 71 chr2 30904309 30904452 -222352131 + MER5B DNA MER1_type 46 178 0 533 292 180 43 chr2 30904452 30905045 -222351538 + L2 LINE L2 2620 3312 -1 261 286 26 103 chr2 30905077 30905311 -222351272 + L2 LINE L2 2941 3156 -116 329 279 25 0 chr2 30908599 30908678 -222347905 - L1MEc LINE L1 -3967 2429 2349 2141 146 0 0 chr2 30908678 30908986 -222347597 - AluSx SINE Alu -4 308 1 2216 114 17 0 chr2 30909094 30909392 -222347191 + AluSq SINE Alu 5 307 -6 1044 158 0 0 chr2 30909392 30909544 -222347039 + AluSg/x SINE Alu 134 285 -27 224 313 133 7 chr2 30909546 30909696 -222346887 - L2 LINE L2 -960 2354 2186 310 347 138 0 chr2 30910333 30910529 -222346054 + MIR SINE MIR 19 241 -21 * 694 257 24 34 chr2 30910521 30910727 -222345856 - MIR SINE MIR -2 260 57 515 226 189 0 chr2 30910769 30910798 -222345785 + MER5A DNA MER1_type 1 23 -166 201 74 0 0 chr2 30910798 30910825 -222345758 + (CAG)n Simple_repeat Simple_repeat 1 27 0 515 226 189 0 chr2 30910825 30910954 -222345629 + MER5A DNA MER1_type 23 189 0 938 144 0 0 chr2 30911079 30911218 -222345365 - FLAM_C SINE Alu -4 139 1 227 310 50 40 chr2 30911222 30911322 -222345261 - MIR3 SINE MIR -31 177 77 3806 80 20 0 chr2 30911791 30912292 -222344291 - LTR10D LTR ERV1 0 513 3 311 361 41 12 chr2 30913186 30913355 -222343228 + MIR SINE MIR 15 188 -74 228 255 235 0 chr2 30914409 30914511 -222342072 + L2 LINE L2 3188 3313 0 2898 214 60 59 chr2 30914618 30915404 -222341179 - L1MC3 LINE L1 -749 5397 5362 2638 62 3 0 chr2 30915404 30915710 -222340873 - AluSp SINE Alu -6 307 1 2898 214 60 59 chr2 30915710 30916561 -222340022 - L1MC3 LINE L1 -784 5362 4514 21 0 0 0 chr2 30968397 30968418 -222288165 + AT_rich Low_complexity Low_complexity 1 21 0 420 289 68 78 chr2 30968427 30968838 -222287745 - MLT1J LTR MaLR 0 511 105 2195 114 0 3 chr2 30968853 30969151 -222287432 + AluSq SINE Alu 1 297 -16 305 219 57 67 chr2 30969677 30969782 -222286801 - MIR SINE MIR -78 184 81 626 126 50 8 chr2 30970484 30970603 -222285980 + L1MB2 LINE L1 6033 6156 -15 192 256 39 51 chr2 30970742 30970820 -222285763 - MIR SINE MIR -56 206 130 411 289 62 16 chr2 30970968 30971162 -222285421 - MIR SINE MIR -6 256 54 1993 134 0 21 chr2 30971177 30971783 -222284800 + AluSx SINE Alu 1 600 0 324 273 25 16 chr2 30972891 30973012 -222283571 + CT-rich Low_complexity Low_complexity 2 123 0 2470 84 3 0 chr2 30973207 30973516 -222283067 - AluSq SINE Alu -3 310 1 375 202 121 110 chr2 30974255 30974314 -222282269 - MER69A DNA AcHobo -2351 175 118 1882 150 41 0 chr2 30974314 30974607 -222281976 - AluJb SINE Alu -7 305 1 375 202 121 110 chr2 30974607 30974720 -222281863 - MER69A DNA AcHobo -2408 118 1 181 264 19 19 chr2 30975203 30975256 -222281327 - L3 LINE CR1 -1061 516 464 393 281 104 10 chr2 30975288 30975480 -222281103 + MIR SINE MIR 52 261 -1 699 261 109 12 chr2 30975556 30975661 -222280922 - L1ME LINE L1 -303 5818 5725 1576 152 10 84 chr2 30975661 30975971 -222280612 + AluJo SINE Alu 1 287 -25 699 261 109 12 chr2 30975971 30976180 -222280403 - L1ME LINE L1 -396 5725 5464 344 232 155 48 chr2 30976762 30976930 -222279653 + MIR SINE MIR 26 211 -51 189 0 0 0 chr2 30977073 30977094 -222279489 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 270 263 12 0 chr2 30977155 30977235 -222279348 + L1MB8 LINE L1 6083 6163 -15 304 81 44 66 chr2 30977240 30977376 -222279207 + (TATAA)n Simple_repeat Simple_repeat 1 133 0 763 195 84 0 chr2 30977591 30977745 -222278838 + L1PB4 LINE L1 5968 6134 -22 22 0 0 0 chr2 30977859 30977881 -222278702 + AT_rich Low_complexity Low_complexity 1 22 0 439 279 194 37 chr2 30979695 30979989 -222276594 + MLT1K LTR MaLR 249 588 0 362 244 26 58 chr2 30980499 30980655 -222275928 + L3 LINE CR1 1130 1280 -297 226 328 24 24 chr2 30981568 30981693 -222274890 - MIR SINE MIR -124 138 14 237 65 0 0 chr2 30981891 30981922 -222274661 + (TG)n Simple_repeat Simple_repeat 1 31 0 379 294 55 18 chr2 30982429 30982592 -222273991 + MIR3 SINE MIR 33 201 -7 845 169 0 0 chr2 30985322 30985479 -222271104 + FLAM_C SINE Alu 2 158 0 378 0 0 0 chr2 30986434 30986476 -222270107 + (TG)n Simple_repeat Simple_repeat 2 43 0 427 269 86 16 chr2 30988049 30988231 -222268352 - MIR SINE MIR -63 145 3 327 78 0 0 chr2 30988254 30988305 -222268278 + (TG)n Simple_repeat Simple_repeat 2 52 0 2551 56 0 7 chr2 30989492 30989796 -222266787 + AluY SINE Alu 2 303 -8 1938 114 50 0 chr2 30991835 30992115 -222264468 + AluSx SINE Alu 3 296 -16 295 299 15 15 chr2 30992361 30992495 -222264088 + L2 LINE L2 2925 3058 -214 4797 175 17 52 chr2 30992794 30994173 -222262410 - L1MB7 LINE L1 0 6184 4850 1195 184 90 20 chr2 30994380 30994498 -222262085 + AluJo SINE Alu 1 109 -203 194 0 39 0 chr2 30994498 30994524 -222262059 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1195 184 90 20 chr2 30994524 30994660 -222261923 + AluJo SINE Alu 109 273 -39 784 231 7 0 chr2 30994702 30994892 -222261691 + FRAM SINE Alu 1 189 0 208 272 49 0 chr2 30995049 30995130 -222261453 + (CATCC)n Simple_repeat Simple_repeat 2 86 0 334 128 0 116 chr2 30995933 30996019 -222260564 + L1MA8 LINE L1 5258 5333 -813 718 172 0 39 chr2 30996019 30996147 -222260436 + FLAM_C SINE Alu 3 125 -18 5259 152 36 29 chr2 30996161 30996511 -222260072 + L1MA8 LINE L1 5314 5660 -631 2366 94 3 3 chr2 30996511 30996818 -222259765 + AluSx SINE Alu 1 307 -5 5259 152 36 29 chr2 30996818 30997434 -222259149 + L1MA8 LINE L1 5660 6287 -4 36 0 0 0 chr2 30997590 30997626 -222258957 + AT_rich Low_complexity Low_complexity 1 36 0 363 195 0 0 chr2 30997839 30997962 -222258621 + C-rich Low_complexity Low_complexity 1 123 0 291 209 0 0 chr2 30997983 30998098 -222258485 + C-rich Low_complexity Low_complexity 1 115 0 31 0 0 0 chr2 30998198 30998229 -222258354 + AT_rich Low_complexity Low_complexity 1 31 0 359 311 74 43 chr2 30998229 30998302 -222258281 - L1ME4a LINE L1 -169 5952 5883 1708 165 3 52 chr2 30998302 30998630 -222257953 - AluJo SINE Alu 0 312 1 359 311 74 43 chr2 30998630 30999218 -222257365 - L1ME4a LINE L1 -238 5883 5269 213 306 118 12 chr2 31000068 31000153 -222256430 - MIR SINE MIR -86 122 29 658 170 88 82 chr2 31001697 31001738 -222254845 - MER45B DNA AcHobo -545 495 456 2083 139 0 3 chr2 31001738 31002039 -222254544 + AluSx SINE Alu 1 300 -12 658 170 88 82 chr2 31002039 31002144 -222254439 - MER45B DNA AcHobo -584 456 348 2410 208 59 6 chr2 31002151 31002660 -222253923 + MER45B DNA AcHobo 502 1037 -3 2229 96 3 7 chr2 31002673 31002976 -222253607 - AluY SINE Alu -9 302 1 260 306 16 16 chr2 31002993 31003114 -222253469 + L2 LINE L2 3193 3313 0 218 224 0 0 chr2 31003255 31003304 -222253279 - L2 LINE L2 0 3272 3224 414 0 0 0 chr2 31003823 31003869 -222252714 + (CA)n Simple_repeat Simple_repeat 1 46 0 2654 65 0 0 chr2 31004550 31004859 -222251724 + AluSc SINE Alu 1 309 0 379 134 0 45 chr2 31004863 31004930 -222251653 + Alu SINE Alu 231 294 -7 377 298 93 6 chr2 31005168 31005329 -222251254 + MIR SINE MIR 40 214 -48 237 180 0 0 chr2 31005365 31005415 -222251168 + (ATG)n Simple_repeat Simple_repeat 2 51 0 1707 170 24 14 chr2 31005576 31005870 -222250713 - AluJb SINE Alu -15 297 1 261 139 0 0 chr2 31007943 31007986 -222248597 + (A)n Simple_repeat Simple_repeat 1 43 0 189 0 0 0 chr2 31008081 31008102 -222248481 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 466 323 91 0 chr2 31008278 31008464 -222248119 + MIR SINE MIR 57 259 -3 930 118 0 22 chr2 31008537 31008673 -222247910 - FLAM_C SINE Alu 0 133 1 2959 203 48 25 chr2 31008696 31009451 -222247132 + L1M4 LINE L1 4535 5310 -836 2611 61 0 0 chr2 31009451 31009762 -222246821 + AluY SINE Alu 1 311 0 2959 203 48 25 chr2 31009762 31009795 -222246788 + L1M4 LINE L1 5310 5341 -805 560 247 25 12 chr2 31009795 31009953 -222246630 + MER21B LTR ERV1 329 543 -388 634 285 28 11 chr2 31010116 31010341 -222246242 - L1MC4 LINE L1 -295 7700 7403 29 60 0 0 chr2 31010385 31010435 -222246148 + AT_rich Low_complexity Low_complexity 1 50 0 1817 161 3 30 chr2 31010460 31010765 -222245818 + AluJo SINE Alu 1 297 -15 2797 183 58 106 chr2 31010779 31011134 -222245449 - L1ME1 LINE L1 -46 6120 5749 230 53 132 0 chr2 31011134 31011172 -222245411 + MADE1 DNA Mariner 1 43 -37 2797 183 58 106 chr2 31011172 31011587 -222244996 - L1ME1 LINE L1 -417 5749 5352 581 41 31 20 chr2 31011596 31011694 -222244889 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 909 142 7 7 chr2 31011711 31011852 -222244731 - AluJo SINE Alu -170 142 2 371 154 0 0 chr2 31011852 31011917 -222244666 + L1MA10 LINE L1 6264 6328 -6 503 208 44 153 chr2 31011928 31012202 -222244381 + HAL1 LINE L1 2250 2493 -14 439 225 125 42 chr2 31013229 31013469 -222243114 + L1ME4a LINE L1 5862 6121 0 184 253 114 0 chr2 31013761 31013840 -222242743 - L2 LINE L2 0 3272 3185 229 238 0 0 chr2 31013928 31013970 -222242613 - MLT1A1 LTR MaLR 0 374 333 1633 174 11 3 chr2 31013972 31014259 -222242324 + AluJb SINE Alu 1 289 -23 2179 112 3 19 chr2 31014270 31014584 -222241999 + AluSx SINE Alu 3 311 -1 1427 181 168 3 chr2 31014587 31014879 -222241704 - MLT1A1 LTR MaLR -25 340 1 275 288 186 17 chr2 31015084 31015261 -222241322 - MIR SINE MIR -50 212 6 571 239 142 13 chr2 31015396 31015551 -222241032 + MER5B DNA MER1_type 1 175 -3 209 232 134 49 chr2 31015910 31015992 -222240591 - MIR3 SINE MIR -23 185 97 498 260 71 41 chr2 31016248 31016417 -222240166 - MIR SINE MIR -48 214 41 22 0 0 0 chr2 31016565 31016587 -222239996 + AT_rich Low_complexity Low_complexity 1 22 0 564 245 37 46 chr2 31017669 31017718 -222238865 - L1ME1 LINE L1 -5 6161 6113 2568 93 5 86 chr2 31017718 31017769 -222238814 - THE1C LTR MaLR 0 375 321 180 0 0 0 chr2 31017769 31017789 -222238794 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2324 68 0 4 chr2 31017792 31018073 -222238510 - AluY SINE Alu -31 280 1 2568 93 5 86 chr2 31018073 31018425 -222238158 - THE1C LTR MaLR -56 319 1 564 245 37 46 chr2 31018425 31018591 -222237992 - L1ME1 LINE L1 -53 6113 5948 1670 176 109 40 chr2 31018591 31018967 -222237616 + MLT1D LTR MaLR 1 402 -103 2516 193 36 22 chr2 31018968 31019466 -222237117 + MLT1D LTR MaLR 1 505 0 189 250 111 0 chr2 31019471 31019543 -222237040 + MIR SINE MIR 118 197 -65 673 226 63 0 chr2 31019837 31019996 -222236587 - MER74A LTR ERVL 0 558 390 710 152 65 43 chr2 31019999 31020106 -222236477 + FLAM_C SINE Alu 2 114 -198 1514 94 10 0 chr2 31020106 31020308 -222236275 - AluSp SINE Alu -10 303 100 710 152 65 43 chr2 31020308 31020338 -222236245 + FLAM_C SINE Alu 114 142 -170 1525 183 147 3 chr2 31020340 31020674 -222235909 - MER74A LTR ERVL -163 395 14 2392 86 7 0 chr2 31020678 31020982 -222235601 + AluSp SINE Alu 1 306 -7 1933 171 0 0 chr2 31021138 31021443 -222235140 - AluSx SINE Alu -7 305 1 484 226 120 23 chr2 31021448 31021581 -222235002 + MLT1L LTR MaLR 314 459 -156 676 202 48 16 chr2 31021583 31021707 -222234876 + FLAM_A SINE Alu 1 128 -14 338 150 98 94 chr2 31021707 31021838 -222234745 + AluJo/FRAM SINE Alu 181 259 -43 * 346 279 61 28 chr2 31021828 31022016 -222234567 + MLT1L LTR MaLR 334 573 0 955 275 75 36 chr2 31022173 31022610 -222233973 - LTR33 LTR ERVL -6 515 55 2001 130 3 3 chr2 31022610 31022911 -222233672 + AluSp SINE Alu 1 301 -12 955 275 75 36 chr2 31022911 31022968 -222233615 - LTR33 LTR ERVL -466 55 2 1097 102 0 32 chr2 31023699 31023856 -222232727 + Charlie3 DNA MER1_type 2554 2705 -5 328 286 52 0 chr2 31023860 31023937 -222232646 + HERV16 LTR ERVL 2781 2861 -2135 650 226 36 20 chr2 31023939 31024130 -222232453 - L1MD3 LINE L1 -2 7968 7593 538 365 27 14 chr2 31024141 31024360 -222232223 + HERV16 LTR ERVL 2869 3090 -1906 2078 138 7 0 chr2 31024362 31024667 -222231916 + AluJb SINE Alu 1 307 -5 202 339 0 0 chr2 31025591 31025650 -222230933 + MIR SINE MIR 40 98 -110 192 335 73 24 chr2 31027530 31027694 -222228889 + MIR SINE MIR 49 220 -42 547 248 47 13 chr2 31027745 31027894 -222228689 - MIR SINE MIR -34 228 75 23 33 0 0 chr2 31028000 31028030 -222228553 + AT_rich Low_complexity Low_complexity 1 30 0 2319 96 3 0 chr2 31028248 31028550 -222228033 - AluSp SINE Alu -10 303 1 1536 230 43 84 chr2 31029538 31030380 -222226203 + L1MB8 LINE L1 5071 5851 -327 340 194 30 0 chr2 31030382 31030449 -222226134 + L1ME LINE L1 5741 5809 -361 340 194 30 0 chr2 31030451 31030518 -222226065 + L1ME LINE L1 5741 5809 -361 340 194 30 0 chr2 31030520 31030587 -222225996 + L1ME LINE L1 5741 5809 -361 * 1381 205 91 40 chr2 31030563 31030993 -222225590 + L1ME3 LINE L1 5711 6162 0 194 301 108 24 chr2 31032342 31032425 -222224158 - L2 LINE L2 -47 3225 3136 706 230 169 33 chr2 31032563 31032776 -222223807 - MIR SINE MIR -19 243 2 1740 164 16 19 chr2 31033188 31033498 -222223085 - AluJo SINE Alu -3 309 1 958 221 62 92 chr2 31034063 31034335 -222222248 - MLT1D LTR MaLR 0 505 204 1832 148 6 38 chr2 31034367 31034685 -222221898 + AluJo SINE Alu 1 308 -4 622 245 88 5 chr2 31034687 31034903 -222221680 - L1M4 LINE L1 -2520 3626 3393 2569 196 131 38 chr2 31034932 31035651 -222220932 - L1MDa LINE L1 -5736 804 19 22 0 0 0 chr2 31035894 31035916 -222220667 + AT_rich Low_complexity Low_complexity 1 22 0 1090 221 70 45 chr2 31036118 31036517 -222220066 + LTR37A LTR ERV1 18 426 0 257 352 71 31 chr2 31036526 31036722 -222219861 + MIR SINE MIR 39 242 -20 180 321 104 8 chr2 31038933 31039067 -222217516 + L2 LINE L2 2214 2360 -954 1480 213 125 103 chr2 31039294 31040032 -222216551 + MER21B LTR ERV1 1 754 -109 211 297 0 0 chr2 31040045 31040109 -222216474 - MIR SINE MIR -22 240 177 792 188 0 0 chr2 31040178 31040311 -222216272 - FLAM_A SINE Alu 0 133 1 224 254 254 9 chr2 31040323 31040433 -222216150 - MIR SINE MIR -110 152 16 2747 10 0 7 chr2 31040523 31040831 -222215752 - AluY SINE Alu -5 306 1 263 298 33 16 chr2 31041380 31041501 -222215082 - MARNA DNA Mariner -191 395 273 664 152 0 29 chr2 31041765 31041870 -222214713 + FLAM_A SINE Alu 26 127 -15 31 44 0 0 chr2 31041884 31041929 -222214654 + AT_rich Low_complexity Low_complexity 1 45 0 431 143 83 0 chr2 31042014 31042098 -222214485 - L1ME4a LINE L1 -217 5904 5814 635 292 83 41 chr2 31042117 31042245 -222214338 - L1ME4a LINE L1 -224 5897 5776 1810 169 78 3 chr2 31042245 31042564 -222214019 - MER2 DNA MER2_type -1 343 1 635 292 83 41 chr2 31042564 31042895 -222213688 - L1ME4a LINE L1 -345 5776 5479 703 169 81 37 chr2 31043632 31043768 -222212815 - FLAM_C SINE Alu 0 143 2 1264 229 130 50 chr2 31043798 31044261 -222212322 + MLT1D LTR MaLR 1 500 -5 226 26 79 0 chr2 31044981 31045019 -222211564 + T-rich Low_complexity Low_complexity 5 45 0 761 214 15 0 chr2 31045022 31045153 -222211430 - FLAM_C SINE Alu 0 133 1 359 238 164 16 chr2 31045389 31045511 -222211072 - MER5A DNA MER1_type 0 189 50 275 278 132 62 chr2 31045410 31045554 -222211029 + MER5A DNA MER1_type 34 187 -2 * 21 36 0 0 chr2 31045559 31045587 -222210996 + AT_rich Low_complexity Low_complexity 1 28 0 7974 32 0 9 chr2 31045697 31047183 -222209400 - L1PA5 LINE L1 0 6154 4675 2184 193 39 2 chr2 31047266 31047283 -222209300 - L1ME LINE L1 -527 5594 5579 1877 137 59 0 chr2 31047283 31047589 -222208994 - L1MB5 LINE L1 0 6174 5851 2184 193 39 2 chr2 31047589 31048311 -222208272 - L1ME LINE L1 -542 5579 4812 1841 97 56 103 chr2 31048329 31048650 -222207933 - AluY SINE Alu -5 306 1 997 124 0 7 chr2 31048650 31048787 -222207796 - AluSq/x SINE Alu -176 137 2 608 193 45 115 chr2 31048799 31049043 -222207540 - LTR8A LTR ERV1 -214 513 287 1073 177 61 139 chr2 31049090 31049400 -222207183 - LTR8 LTR ERV1 -425 266 1 2712 204 60 49 chr2 31049401 31049635 -222206948 - L1ME LINE L1 -1371 4775 4545 2344 88 0 3 chr2 31049635 31049969 -222206614 - AluSg1 SINE Alu 0 333 1 2232 118 0 0 chr2 31049971 31050267 -222206316 - AluSx SINE Alu -16 296 1 2712 204 60 49 chr2 31050267 31050796 -222205787 - L1ME LINE L1 -1601 4545 3999 212 267 23 30 chr2 31051909 31052040 -222204543 + (TA)n Simple_repeat Simple_repeat 1 130 0 680 213 158 52 chr2 31052780 31053146 -222203437 - LTR37A LTR ERV1 -21 405 1 654 146 82 27 chr2 31053184 31053294 -222203289 - FLAM_A SINE Alu -16 126 11 1922 165 0 10 chr2 31053407 31053710 -222202873 - AluJo SINE Alu -12 300 1 1593 170 19 15 chr2 31053775 31054045 -222202538 - AluJo SINE Alu -29 283 13 244 349 135 21 chr2 31054556 31054748 -222201835 + L3 LINE CR1 1353 1566 -11 594 275 67 10 chr2 31054893 31055086 -222201497 - MIR SINE MIR 0 262 59 2763 164 15 19 chr2 31055110 31055573 -222201010 + MER1A DNA MER1_type 69 529 0 22 0 0 0 chr2 31056826 31056848 -222199735 + AT_rich Low_complexity Low_complexity 1 22 0 807 176 81 0 chr2 31057288 31057424 -222199159 + FRAM SINE Alu 1 144 -32 279 79 0 0 chr2 31057438 31057476 -222199107 + (TAGG)n Simple_repeat Simple_repeat 1 38 0 1254 229 86 51 chr2 31057760 31057974 -222198609 + L1ME3 LINE L1 5689 5894 -268 1597 178 0 57 chr2 31057974 31058305 -222198278 - AluJo SINE Alu 0 312 1 1254 229 86 51 chr2 31058305 31058522 -222198061 + L1ME3 LINE L1 5894 6135 -27 394 294 46 0 chr2 31058606 31058715 -222197868 + MIR SINE MIR 30 143 -65 1618 157 75 14 chr2 31058973 31059253 -222197330 - AluJb SINE Alu -15 297 1 634 269 14 7 chr2 31059365 31059510 -222197073 + FRAM SINE Alu 1 146 -30 261 302 102 66 chr2 31059558 31060039 -222196544 - L2 LINE L2 -60 3253 2691 885 297 87 25 chr2 31060046 31060528 -222196055 - L2 LINE L2 -1010 2304 1793 611 158 0 53 chr2 31061442 31061556 -222195027 + FLAM_C SINE Alu 30 137 -6 189 297 0 31 chr2 31061602 31061666 -222194917 + MIR SINE MIR 7 68 -194 1612 147 34 31 chr2 31061676 31061965 -222194618 + L1MC3 LINE L1 7451 7743 -42 837 149 0 8 chr2 31061965 31062099 -222194484 + FLAM_C SINE Alu 1 133 0 1612 147 34 31 chr2 31062099 31062135 -222194448 + L1MC3 LINE L1 7743 7777 -8 560 275 56 11 chr2 31062179 31062357 -222194226 + MIR SINE MIR 67 252 -10 486 354 6 6 chr2 31062587 31062745 -222193838 + MIR3 SINE MIR 3 160 -48 946 269 24 30 chr2 31062835 31063169 -222193414 + MARNA DNA Mariner 200 531 -55 390 57 0 0 chr2 31063659 31063712 -222192871 + (GTATG)n Simple_repeat Simple_repeat 2 54 0 26 64 0 0 chr2 31065001 31065048 -222191535 + AT_rich Low_complexity Low_complexity 1 47 0 439 253 180 35 chr2 31065418 31065711 -222190872 + MLT1J2 LTR MaLR 105 429 -21 291 250 91 23 chr2 31066228 31066316 -222190267 - L2 LINE L2 -23 3290 3197 687 133 44 7 chr2 31066696 31066831 -222189752 + L1MB8 LINE L1 6038 6177 -1 2493 62 3 0 chr2 31068105 31068409 -222188174 - AluY SINE Alu -6 305 1 725 256 98 28 chr2 31068716 31068931 -222187652 - MIR SINE MIR 0 262 33 2156 89 48 10 chr2 31068958 31069250 -222187333 - AluY SINE Alu -8 303 1 202 154 154 0 chr2 31069341 31069380 -222187203 + MIR SINE MIR 98 142 -66 1158 189 117 14 chr2 31069568 31069859 -222186724 + MER33 DNA MER1_type 3 323 -1 648 212 171 45 chr2 31070058 31070280 -222186303 - MIR SINE MIR -11 251 2 201 318 143 19 chr2 31071052 31071313 -222185270 - L2 LINE L2 -217 3055 2763 186 43 0 0 chr2 31071332 31071355 -222185228 + (A)n Simple_repeat Simple_repeat 1 23 0 246 297 108 51 chr2 31071720 31071915 -222184668 + MIR SINE MIR 48 253 -9 488 231 177 14 chr2 31072334 31072481 -222184102 - L1MD2 LINE L1 -237 6122 5952 642 175 8 25 chr2 31072630 31072750 -222183833 + AluJo SINE Alu 1 118 -184 190 118 59 0 chr2 31072760 31072811 -222183772 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 1073 158 28 6 chr2 31072822 31072999 -222183584 + AluJo SINE Alu 120 300 -12 270 231 0 0 chr2 31073302 31073354 -222183229 - MER4-int LTR ERV1 -5436 1162 1111 185 156 0 44 chr2 31073356 31073401 -222183182 + (TATG)n Simple_repeat Simple_repeat 1 43 0 24 53 0 0 chr2 31073571 31073609 -222182974 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 31073713 31073736 -222182847 + AT_rich Low_complexity Low_complexity 1 23 0 287 164 18 18 chr2 31074041 31074096 -222182487 - MIR3 SINE MIR -3 205 151 452 209 60 55 chr2 31074103 31074285 -222182298 - MER20B DNA MER1_type -9 774 592 277 270 16 0 chr2 31074332 31074395 -222182188 - MER20B DNA MER1_type -717 66 3 2342 110 128 11 chr2 31074672 31075054 -222181529 - MSTA LTR MaLR 0 428 2 185 271 262 16 chr2 31075265 31075387 -222181196 + MIR SINE MIR 61 212 -50 1386 170 111 18 chr2 31076781 31077122 -222179461 - LTR25 LTR ERV1 -7 787 415 308 148 148 0 chr2 31077093 31077154 -222179429 - MER51A LTR ERV1 -354 280 211 * 405 165 0 92 chr2 31077285 31077394 -222179189 - MER61E LTR ERV1 -470 99 1 257 241 120 0 chr2 31077419 31077527 -222179056 + MIR SINE MIR 92 212 -50 2202 101 0 7 chr2 31077933 31078241 -222178342 - AluSq SINE Alu -7 306 1 211 271 0 0 chr2 31078326 31078374 -222178209 + L3 LINE CR1 1524 1571 -6 2889 128 16 26 chr2 31079527 31079836 -222176747 + LOR1a LTR ERV1 1 305 -192 405 0 0 0 chr2 31079836 31079881 -222176702 + (TG)n Simple_repeat Simple_repeat 2 46 0 2889 128 16 26 chr2 31079881 31080073 -222176510 + LOR1a LTR ERV1 305 497 0 1298 146 0 33 chr2 31080235 31080448 -222176135 + AluSg/x SINE Alu 91 296 -16 318 252 129 14 chr2 31080787 31080926 -222175657 - L1ME4a LINE L1 -1 6120 5966 1964 180 49 24 chr2 31081130 31081581 -222175002 - L1MB8 LINE L1 -16 6162 5701 1694 172 103 48 chr2 31081581 31082024 -222174559 - MER66A LTR ERV1 0 599 97 715 118 0 17 chr2 31082093 31082212 -222174371 - L1MB8 LINE L1 -480 5704 5588 264 100 0 0 chr2 31082841 31082881 -222173702 + (TG)n Simple_repeat Simple_repeat 2 41 0 182 114 105 29 chr2 31082881 31082986 -222173597 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 22 0 0 0 chr2 31083086 31083108 -222173475 + AT_rich Low_complexity Low_complexity 1 22 0 666 263 89 42 chr2 31083742 31084267 -222172316 - L1MC4a LINE L1 -860 5437 5328 803 245 51 39 chr2 31084324 31084581 -222172002 - L1ME3A LINE L1 -21 6149 5890 23 33 0 0 chr2 31085112 31085142 -222171441 + AT_rich Low_complexity Low_complexity 1 30 0 7099 163 34 14 chr2 31086094 31088262 -222168321 - L1PA13 LINE L1 -2 6161 3931 1877 143 31 0 chr2 31088349 31088635 -222167948 - AluSx SINE Alu -13 299 5 2393 255 74 39 chr2 31088853 31089998 -222166585 - HAL1 LINE L1 -616 1891 707 628 95 0 0 chr2 31090006 31090090 -222166493 - AluS SINE Alu -228 84 1 1455 275 58 41 chr2 31090094 31090165 -222166418 - HAL1 LINE L1 -1800 707 639 1072 164 56 5 chr2 31090165 31090360 -222166223 - MER3 DNA MER1_type 0 209 5 1455 275 58 41 chr2 31090360 31090844 -222165739 - HAL1 LINE L1 -1868 639 143 407 372 64 6 chr2 31091446 31091943 -222164640 - L1MC4a LINE L1 -1885 5923 5398 259 205 0 26 chr2 31092030 31092108 -222164475 + (TA)n Simple_repeat Simple_repeat 1 76 0 593 140 20 10 chr2 31092377 31092477 -222164106 + MER4A LTR ERV1 1 101 -563 * 1966 125 3 24 chr2 31092476 31092827 -222163756 + MER4A LTR ERV1 263 664 0 5023 120 37 5 chr2 31094725 31095481 -222161102 + LTR17 LTR ERV1 1 780 0 4964 93 13 21 chr2 31095496 31096194 -222160389 + HERV17 LTR ERV1 16 707 -7919 5499 98 27 10 chr2 31096462 31097322 -222159261 + HERV17 LTR ERV1 737 1659 -5237 5142 49 18 0 chr2 31097304 31097932 -222158651 + HERV17 LTR ERV1 3940 4578 -4048 * 596 53 0 0 chr2 31097915 31097991 -222158592 + HERV17 LTR ERV1 7473 7548 -1078 * 2461 48 0 0 chr2 31097981 31098273 -222158310 + HERV17 LTR ERV1 8335 8626 0 4888 126 30 8 chr2 31098273 31099036 -222157547 + LTR17 LTR ERV1 1 780 0 832 339 8 0 chr2 31099235 31099474 -222157109 + MIR SINE MIR 22 262 0 25 0 0 0 chr2 31099555 31099580 -222157003 + AT_rich Low_complexity Low_complexity 1 25 0 2338 201 25 98 chr2 31099580 31099658 -222156925 - L1ME1 LINE L1 -18 6148 6066 4056 89 7 0 chr2 31099658 31100206 -222156377 + MER41A LTR ERV1 1 552 -2 2338 201 25 98 chr2 31100206 31100284 -222156299 - L1ME1 LINE L1 -100 6066 5984 2142 100 4 0 chr2 31100284 31100564 -222156019 - AluSc SINE Alu -20 289 9 2338 201 25 98 chr2 31100564 31101137 -222155446 - L1ME1 LINE L1 -182 5984 5472 325 274 24 65 chr2 31101298 31101422 -222155161 + L2 LINE L2 3153 3271 -1 340 297 10 10 chr2 31101638 31101739 -222154844 + MIR3 SINE MIR 69 169 -39 255 173 0 39 chr2 31102124 31102176 -222154407 - L1MEc LINE L1 -5849 547 498 1995 140 3 0 chr2 31102354 31102654 -222153929 + AluSc SINE Alu 1 301 -8 1783 172 6 25 chr2 31103196 31103522 -222153061 + Tigger7 DNA MER2_type 2 321 -412 730 140 103 0 chr2 31103525 31103661 -222152922 + Tigger7 DNA MER2_type 2314 2463 -24 1642 129 117 0 chr2 31103880 31104144 -222152439 - AluSx SINE Alu -17 295 1 1475 163 61 34 chr2 31104573 31104868 -222151715 + MER2 DNA MER2_type 39 341 -4 707 254 57 62 chr2 31104888 31105306 -222151277 - L1ME LINE L1 -4898 1653 1229 411 269 115 0 chr2 31105439 31105543 -222151040 - L2 LINE L2 -5 3267 3152 289 306 0 0 chr2 31106008 31106080 -222150503 + MIR3 SINE MIR 124 195 -13 727 285 8 38 chr2 31106315 31106582 -222150001 + MIR SINE MIR 3 261 -1 205 186 0 0 chr2 31106583 31106626 -222149957 + T-rich Low_complexity Low_complexity 3 45 0 444 216 144 0 chr2 31106915 31107026 -222149557 - MLT1J LTR MaLR -317 194 68 350 321 113 6 chr2 31108093 31108252 -222148331 - L3 LINE CR1 -11 1566 1391 196 339 46 0 chr2 31108402 31108467 -222148116 - L3 LINE CR1 -30 1547 1480 183 191 21 64 chr2 31108473 31108520 -222148063 + L2 LINE L2 3262 3306 -7 1378 228 29 0 chr2 31109330 31109611 -222146972 - AluJo SINE Alu -13 289 1 2365 83 0 3 chr2 31109751 31110051 -222146532 + AluSg SINE Alu 1 299 -11 466 237 63 139 chr2 31110600 31111030 -222145553 - L1ME3A LINE L1 -7 6097 5701 369 0 0 0 chr2 31112990 31113031 -222143552 + (TG)n Simple_repeat Simple_repeat 2 42 0 1998 78 10 61 chr2 31113035 31113331 -222143252 - AluY SINE Alu -30 281 1 651 247 70 26 chr2 31113405 31113632 -222142951 - MLT1G LTR MaLR -353 237 1 344 310 46 23 chr2 31113702 31113876 -222142707 + L1M4 LINE L1 3337 3514 -2632 6576 201 32 28 chr2 31114204 31115850 -222140733 + L1M2 LINE L1 1375 3013 -3835 2690 13 3 3 chr2 31115850 31116151 -222140432 + AluYb8 SINE Alu 1 301 -17 6576 201 32 28 chr2 31116151 31116273 -222140310 + L1M2 LINE L1 3013 3133 -3715 279 79 0 0 chr2 31116273 31116311 -222140272 + (CA)n Simple_repeat Simple_repeat 2 39 0 6576 201 32 28 chr2 31116311 31117123 -222139460 + L1M2 LINE L1 3133 3971 -2877 1844 116 51 3 chr2 31117123 31117415 -222139168 + AluSx SINE Alu 1 306 -6 6576 201 32 28 chr2 31117415 31117704 -222138879 + L1M2 LINE L1 3971 4257 -2591 2151 80 31 3 chr2 31117718 31118004 -222138579 - AluSc SINE Alu -15 294 1 853 176 28 50 chr2 31118004 31118186 -222138397 - FRAM SINE Alu -6 170 1 261 349 122 26 chr2 31118533 31118722 -222137861 - MIR SINE MIR -27 235 29 30 69 0 0 chr2 31118727 31118785 -222137798 + AT_rich Low_complexity Low_complexity 1 58 0 430 281 160 44 chr2 31118974 31119409 -222137174 - L1MC4a LINE L1 -1893 5915 5417 2230 107 10 0 chr2 31119409 31119717 -222136866 - AluSq SINE Alu -2 311 1 430 281 160 44 chr2 31119717 31119761 -222136822 - L1MC4a LINE L1 -2391 5417 5380 734 145 76 15 chr2 31120033 31120164 -222136419 + FRAM SINE Alu 24 162 -14 230 253 115 23 chr2 31120320 31120407 -222136176 - L1MC4a LINE L1 -1311 4835 4741 1103 275 78 6 chr2 31120517 31121234 -222135349 - L1ME3A LINE L1 -538 5560 4780 241 208 19 0 chr2 31121249 31121302 -222135281 - L1ME3A LINE L1 -1366 4714 4661 3120 263 100 22 chr2 31121440 31122822 -222133761 - L1ME3A LINE L1 -1680 4400 2912 435 257 20 33 chr2 31122911 31123063 -222133520 - L1ME3A LINE L1 -5901 169 20 218 310 42 14 chr2 31123126 31123197 -222133386 - L3 LINE CR1 -4 1573 1501 22 0 0 0 chr2 31125050 31125072 -222131511 + AT_rich Low_complexity Low_complexity 1 22 0 356 277 200 29 chr2 31126255 31126605 -222129978 + MLT1L LTR MaLR 196 605 -10 5401 91 16 3 chr2 31126957 31127713 -222128870 - MER4E LTR ERV1 0 766 1 3402 225 69 33 chr2 31128915 31129739 -222126844 - L1MC3 LINE L1 -7 7778 6907 1650 146 0 87 chr2 31129739 31130061 -222126522 - AluJo SINE Alu -18 294 1 3402 225 69 33 chr2 31130061 31130276 -222126307 - L1MC3 LINE L1 -878 6907 6701 1076 211 48 81 chr2 31130276 31130821 -222125762 - MLT1D LTR MaLR 0 505 1 362 169 0 0 chr2 31130821 31130880 -222125703 - L1MD3 LINE L1 -1268 6727 6669 2791 13 0 0 chr2 31132289 31132594 -222123989 + AluYb8 SINE Alu 2 306 -12 822 254 102 8 chr2 31133198 31133434 -222123149 + MIR SINE MIR 4 261 -1 559 296 54 50 chr2 31133601 31134080 -222122503 + HAL1 LINE L1 1180 1660 -847 1452 139 165 0 chr2 31134581 31134848 -222121735 - AluJb SINE Alu 0 312 2 986 206 14 28 chr2 31134850 31135068 -222121515 - MER58B DNA MER1_type -10 331 117 397 200 90 38 chr2 31135401 31135498 -222121085 + MER5C DNA MER1_type 1 91 -233 2395 70 7 0 chr2 31135498 31135799 -222120784 - AluSp SINE Alu -10 303 1 397 200 90 38 chr2 31135799 31135925 -222120658 + MER5C DNA MER1_type 91 294 -30 402 21 0 0 chr2 31136039 31136086 -222120497 + (TG)n Simple_repeat Simple_repeat 1 47 0 2319 101 0 0 chr2 31136173 31136470 -222120113 - AluSq SINE Alu -16 297 1 22 35 0 0 chr2 31136626 31136655 -222119928 + AT_rich Low_complexity Low_complexity 1 29 0 562 291 23 18 chr2 31136661 31136881 -222119702 + L1ME3 LINE L1 4898 5118 -1028 1675 267 90 60 chr2 31136968 31137073 -222119510 + L1ME3 LINE L1 5292 5392 -770 2400 90 7 0 chr2 31137073 31137374 -222119209 + AluSx SINE Alu 1 303 -9 1675 267 90 60 chr2 31137374 31138112 -222118471 + L1ME3 LINE L1 5392 6160 -2 383 0 21 0 chr2 31139034 31139081 -222117502 + (TG)n Simple_repeat Simple_repeat 2 49 0 1884 124 7 49 chr2 31139085 31139392 -222117191 - AluSx SINE Alu -18 294 1 2377 90 0 3 chr2 31139697 31139998 -222116585 - AluSq SINE Alu -13 300 1 323 269 45 135 chr2 31141073 31141146 -222115437 - MIR3 SINE MIR -39 169 91 637 219 0 0 chr2 31141146 31141260 -222115323 + FLAM_A SINE Alu 2 115 -18 195 42 0 0 chr2 31141263 31141287 -222115296 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 323 269 45 135 chr2 31141287 31141365 -222115218 - MIR3 SINE MIR -119 89 28 576 118 129 0 chr2 31141809 31141902 -222114681 - FRAM SINE Alu -10 166 62 23 0 0 0 chr2 31142908 31142931 -222113652 + AT_rich Low_complexity Low_complexity 1 23 0 292 270 127 8 chr2 31143654 31143780 -222112803 - L1ME4a LINE L1 -14 6107 5967 2030 162 19 65 chr2 31143858 31144290 -222112293 - MLT2D LTR ERVL -2 412 1 895 299 53 38 chr2 31144425 31144823 -222111760 - L2 LINE L2 -94 3219 2816 21 82 0 0 chr2 31145878 31145927 -222110656 + AT_rich Low_complexity Low_complexity 1 49 0 1814 259 43 13 chr2 31146090 31146630 -222109953 + LTR38 LTR ERV1 1 556 0 2363 94 0 0 chr2 31147253 31147562 -222109021 - AluY SINE Alu -2 309 1 237 65 0 0 chr2 31147620 31147651 -222108932 + (A)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr2 31149112 31149136 -222107447 + AT_rich Low_complexity Low_complexity 1 24 0 451 309 60 12 chr2 31149157 31149325 -222107258 - MIR SINE MIR -1 261 86 245 236 69 14 chr2 31149685 31149757 -222106826 - MIR3 SINE MIR -24 184 109 382 275 37 18 chr2 31151117 31151226 -222105357 + MER5B DNA MER1_type 7 117 -61 230 312 65 11 chr2 31151324 31151417 -222105166 - MIR SINE MIR -154 108 11 375 357 92 46 chr2 31151883 31152317 -222104266 + L2 LINE L2 2433 2886 -428 254 325 0 0 chr2 31152521 31152598 -222103985 + L2 LINE L2 3222 3298 -15 1395 140 0 10 chr2 31152698 31152905 -222103678 + AluSg/x SINE Alu 85 289 -23 368 295 101 82 chr2 31153781 31154137 -222102446 + L2 LINE L2 2891 3253 -19 229 200 67 0 chr2 31155825 31155900 -222100683 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 26 0 0 0 chr2 31156475 31156501 -222100082 + AT_rich Low_complexity Low_complexity 1 26 0 194 250 96 0 chr2 31156779 31156831 -222099752 + MIR SINE MIR 21 77 -131 473 324 6 18 chr2 31157745 31157915 -222098668 - L3 LINE CR1 -121 1456 1289 894 196 16 5 chr2 31158119 31158303 -222098280 - MLT1C LTR MaLR 0 467 282 525 256 47 10 chr2 31158730 31159001 -222097582 - L1MD3 LINE L1 -3 7982 6026 274 204 78 19 chr2 31159513 31159616 -222096967 + HAL1 LINE L1 1950 2058 -449 480 208 94 52 chr2 31159686 31159840 -222096743 + L1MDa LINE L1 2419 2584 -3956 2182 102 10 0 chr2 31159840 31160134 -222096449 - AluY SINE Alu -14 297 1 480 208 94 52 chr2 31160134 31160171 -222096412 + L1MDa LINE L1 2584 2618 -3922 1019 217 68 37 chr2 31160171 31160466 -222096117 + MER82 DNA MER2_type 2 305 -348 253 322 34 42 chr2 31160941 31161059 -222095524 - MIR SINE MIR -133 129 13 503 331 105 57 chr2 31161876 31161984 -222094599 + L2 LINE L2 2465 2566 -747 1829 237 41 26 chr2 31161984 31162474 -222094109 - MLT1D LTR MaLR -4 501 5 503 331 105 57 chr2 31162474 31163183 -222093400 + L2 LINE L2 2566 3311 -2 569 155 7 92 chr2 31163289 31163431 -222093152 - THE1C LTR MaLR -19 356 227 22 70 0 0 chr2 31163558 31163601 -222092982 + GC_rich Low_complexity Low_complexity 1 43 0 1413 157 105 49 chr2 31163929 31164253 -222092330 + MER66A LTR ERV1 137 478 0 2040 171 53 29 chr2 31164253 31164704 -222091879 + L1MB8 LINE L1 5701 6162 -16 347 252 129 14 chr2 31164908 31165047 -222091536 + L1ME4a LINE L1 5966 6120 -1 1264 146 5 33 chr2 31165386 31165598 -222090985 - AluSg/x SINE Alu -16 296 91 3133 129 16 26 chr2 31165760 31165952 -222090631 - LOR1a LTR ERV1 0 497 305 405 0 0 0 chr2 31165952 31165997 -222090586 + (CA)n Simple_repeat Simple_repeat 2 46 0 3133 129 16 26 chr2 31165997 31166306 -222090277 - LOR1a LTR ERV1 -192 305 1 203 271 0 0 chr2 31167459 31167507 -222089076 - L3 LINE CR1 -6 1571 1524 2323 73 7 3 chr2 31167592 31167892 -222088691 + AluSx SINE Alu 1 301 -11 504 237 63 139 chr2 31168441 31168871 -222087712 - L1ME3A LINE L1 -7 6163 5767 1192 264 115 58 chr2 31170352 31171463 -222085120 - L1ME3A LINE L1 -2099 4047 2857 216 0 0 0 chr2 31171463 31171487 -222085096 + (TG)n Simple_repeat Simple_repeat 2 25 0 1192 264 115 58 chr2 31171487 31171612 -222084971 - L1ME3A LINE L1 -3289 2857 2741 233 229 0 14 chr2 31171646 31171716 -222084867 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 359 153 339 32 chr2 31172956 31173080 -222083503 - MIR SINE MIR -73 189 28 2431 81 0 0 chr2 31174110 31174405 -222082178 - AluSq SINE Alu -18 295 1 180 288 34 0 chr2 31174405 31174464 -222082119 - L3 LINE CR1 -252 1325 1265 761 228 84 10 chr2 31174818 31175020 -222081563 - L1ME2 LINE L1 -9 6155 5939 279 248 202 18 chr2 31175108 31175217 -222081366 + MIR3 SINE MIR 66 194 -14 224 340 114 37 chr2 31175212 31175562 -222081021 + L2 LINE L2 2383 2759 -555 * 221 289 96 58 chr2 31175763 31175867 -222080716 + L2 LINE L2 3124 3231 -41 608 219 49 0 chr2 31175964 31176087 -222080496 - FLAM_A SINE Alu -5 137 9 255 61 0 0 chr2 31178390 31178423 -222078160 + (T)n Simple_repeat Simple_repeat 1 33 0 240 111 0 0 chr2 31178886 31178922 -222077661 + (T)n Simple_repeat Simple_repeat 1 36 0 252 77 0 0 chr2 31179616 31179655 -222076928 + (CACCT)n Simple_repeat Simple_repeat 1 39 0 255 315 154 6 chr2 31180855 31181017 -222075566 - MLT1K LTR MaLR -6 582 397 339 282 193 36 chr2 31181670 31182007 -222074576 - MLT1K LTR MaLR -197 391 2 100 0 0 9 chr2 31183097 31183190 -222073393 + AT_rich Low_complexity Low_complexity 1 94 -16 2238 112 0 0 chr2 31183190 31183477 -222073106 + AluSx SINE Alu 1 287 -25 100 0 0 9 chr2 31183477 31183494 -222073089 + AT_rich Low_complexity Low_complexity 94 110 0 392 299 63 54 chr2 31183669 31183890 -222072693 + L1MC/D LINE L1 5568 5790 -2018 855 150 66 70 chr2 31183910 31184123 -222072460 + L1MB2 LINE L1 5692 5903 -268 180 161 0 0 chr2 31184326 31184357 -222072226 - L2 LINE L2 -2583 731 701 523 266 43 0 chr2 31184708 31184847 -222071736 - MER5B DNA MER1_type -21 157 13 233 167 0 0 chr2 31184877 31184919 -222071664 + MIR SINE MIR 104 145 -63 2058 106 35 0 chr2 31185052 31185334 -222071249 + AluSx SINE Alu 1 292 -20 180 0 0 0 chr2 31185397 31185417 -222071166 + (A)n Simple_repeat Simple_repeat 1 20 0 938 200 73 0 chr2 31186233 31186398 -222070185 + MER45A DNA AcHobo 1 177 -1 237 245 0 0 chr2 31186442 31186491 -222070092 - MER5B DNA MER1_type -3 175 127 1613 187 47 59 chr2 31187437 31187998 -222068585 - Charlie1b DNA MER1_type -11 512 17 352 245 26 80 chr2 31188057 31188208 -222068375 + MIR3 SINE MIR 15 157 -51 238 368 9 0 chr2 31188211 31188317 -222068266 + MER5B DNA MER1_type 1 107 -71 2881 197 96 6 chr2 31188344 31189161 -222067422 + L1MC4a LINE L1 6842 7746 -62 357 315 9 9 chr2 31189161 31189269 -222067314 + L2 LINE L2 2921 3028 -285 941 144 0 0 chr2 31189772 31189904 -222066679 + FLAM_C SINE Alu 1 132 -1 191 290 87 0 chr2 31189979 31190048 -222066535 - MIR SINE MIR -111 151 77 251 275 12 12 chr2 31190181 31190261 -222066322 + MIR SINE MIR 49 128 -134 277 277 50 20 chr2 31190398 31190499 -222066084 - MIR SINE MIR 0 262 159 554 239 142 31 chr2 31190499 31190805 -222065778 - MLT1G1 LTR MaLR 0 595 183 713 200 0 53 chr2 31190902 31191072 -222065511 - MIR SINE MIR -86 176 16 192 277 85 31 chr2 31191619 31191749 -222064834 + MIR3 SINE MIR 45 181 -27 359 276 112 60 chr2 31191953 31192203 -222064380 - L2 LINE L2 -422 2892 2630 390 259 132 57 chr2 31192943 31193155 -222063428 + MIR SINE MIR 24 251 -11 228 311 148 16 chr2 31193405 31193527 -222063056 - MIR3 SINE MIR -29 179 42 255 170 0 0 chr2 31193536 31193583 -222063000 + CT-rich Low_complexity Low_complexity 3 49 0 1962 146 7 3 chr2 31193585 31193894 -222062689 - AluSx SINE Alu -2 310 1 182 158 26 0 chr2 31194123 31194161 -222062422 - L2 LINE L2 0 3272 3234 2937 83 13 5 chr2 31194183 31194555 -222062028 - THE1C LTR MaLR 0 375 1 234 241 206 50 chr2 31194557 31194698 -222061885 - MIR SINE MIR -17 245 83 1779 261 5 34 chr2 31194698 31195112 -222061471 + MLT2E LTR ERVL 1 402 -226 312 279 51 0 chr2 31195698 31195777 -222060806 + MIR SINE MIR 90 172 -90 243 259 0 0 chr2 31196443 31196497 -222060086 - MIR SINE MIR -74 134 81 212 143 0 48 chr2 31196492 31196534 -222060049 - MIR SINE MIR -4 258 219 * 271 305 55 16 chr2 31198556 31198684 -222057899 + L2 LINE L2 3179 3311 -2 259 304 42 98 chr2 31199826 31200162 -222056421 - L2 LINE L2 -86 3186 2870 577 326 21 0 chr2 31200276 31200463 -222056120 + Charlie8 DNA MER1_type 75 265 -2152 1627 170 49 46 chr2 31201153 31201500 -222055083 + MLT1A1 LTR MaLR 18 365 0 195 42 0 0 chr2 31201660 31201684 -222054899 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 1102 199 126 111 chr2 31203011 31203408 -222053175 + MER57A LTR ERV1 1 403 0 621 308 155 51 chr2 31203518 31204524 -222052059 - L1MCc LINE L1 -2889 4052 2942 1857 143 7 52 chr2 31204565 31204872 -222051711 - AluSx SINE Alu -19 293 1 201 240 0 0 chr2 31204949 31205024 -222051559 + T-rich Low_complexity Low_complexity 1 75 0 2315 261 100 61 chr2 31205465 31206171 -222050412 - L1MCc LINE L1 -4364 2758 2081 2183 134 0 3 chr2 31206171 31206484 -222050099 - AluSx SINE Alu 0 312 1 2315 261 100 61 chr2 31206484 31207869 -222048714 - L1MCc LINE L1 -5041 2081 365 3143 193 47 78 chr2 31207896 31208419 -222048164 + L1ME1 LINE L1 4878 5416 -750 2205 73 84 0 chr2 31208419 31208706 -222047877 + AluY SINE Alu 1 311 0 3143 193 47 78 chr2 31208706 31209514 -222047069 + L1ME1 LINE L1 5416 6161 -5 416 259 11 106 chr2 31209575 31209849 -222046734 + L1ME LINE L1 2111 2358 -3788 233 229 0 14 chr2 31210081 31210151 -222046432 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 1367 280 114 52 chr2 31210186 31211593 -222044990 + L1ME LINE L1 2741 4235 -1911 2349 64 0 0 chr2 31211677 31211981 -222044602 - AluY SINE Alu 0 304 1 2148 119 3 3 chr2 31212031 31212326 -222044257 - AluSx SINE Alu -17 295 1 545 266 41 35 chr2 31212720 31213010 -222043573 + L1ME LINE L1 4385 4676 -1470 1651 164 11 18 chr2 31213323 31213609 -222042974 - AluJb SINE Alu -10 302 19 1080 274 88 25 chr2 31213613 31214259 -222042324 + L1ME LINE L1 5079 5797 -365 334 239 14 0 chr2 31214383 31214454 -222042129 - MER58 DNA MER1_type -4 2416 2345 277 323 39 15 chr2 31215607 31215737 -222040846 + MIR SINE MIR 130 262 0 275 271 108 23 chr2 31215766 31215895 -222040688 + MIR SINE MIR 117 256 -6 225 336 100 7 chr2 31216105 31216245 -222040338 + MIR3 SINE MIR 16 168 -40 660 197 15 0 chr2 31216902 31217034 -222039549 - Zaphod DNA AcHobo -6 4025 3892 1028 209 171 40 chr2 31217057 31217479 -222039104 + MLT1D LTR MaLR 19 495 -10 2317 130 68 64 chr2 31217621 31218045 -222038538 - MSTB LTR MaLR 0 426 1 201 338 52 0 chr2 31218225 31218302 -222038281 + MIR SINE MIR 61 141 -121 2485 100 0 0 chr2 31218438 31218748 -222037835 - AluSg SINE Alu 0 310 1 1907 115 50 70 chr2 31219795 31220178 -222036405 - THE1C LTR MaLR 0 375 1 274 259 0 47 chr2 31221519 31221604 -222034979 - MER5A DNA MER1_type -101 88 8 502 243 33 66 chr2 31223007 31223188 -222033395 - MER69A DNA AcHobo 0 177 3 408 305 188 0 chr2 31223603 31223816 -222032767 - MIR SINE MIR -2 260 8 2140 115 7 3 chr2 31223861 31224156 -222032427 - AluSq SINE Alu -17 296 1 2429 104 0 0 chr2 31224556 31224863 -222031720 - AluSx SINE Alu -5 307 1 1703 210 51 14 chr2 31225011 31225444 -222031139 - Charlie4a DNA MER1_type -38 470 22 196 329 24 0 chr2 31226234 31226319 -222030264 - MIR3 SINE MIR -5 203 117 210 263 35 0 chr2 31226474 31226531 -222030052 + MIR SINE MIR 124 182 -80 181 272 37 49 chr2 31226607 31226688 -222029895 + L2 LINE L2 3225 3304 -9 205 342 82 64 chr2 31227661 31228050 -222028533 - L2 LINE L2 -11 3261 2866 1976 195 72 9 chr2 31229316 31229763 -222026820 + MLT1D LTR MaLR 29 503 -2 1173 219 162 21 chr2 31229834 31230000 -222026583 + MLT1A2 LTR MaLR 1 142 -232 896 8 33 0 chr2 31230000 31230121 -222026462 + (TC)n Simple_repeat Simple_repeat 2 126 0 1173 219 162 21 chr2 31230121 31230282 -222026301 + MLT1A2 LTR MaLR 142 374 0 375 302 87 41 chr2 31230666 31230838 -222025745 + MIR SINE MIR 55 234 -28 225 211 0 0 chr2 31231508 31231560 -222025023 + (CA)n Simple_repeat Simple_repeat 1 52 0 373 296 118 25 chr2 31231812 31232015 -222024568 + L3 LINE CR1 642 863 -714 547 297 46 32 chr2 31232630 31232849 -222023734 + MIR SINE MIR 35 256 -6 219 316 79 0 chr2 31232886 31232962 -222023621 + MIR SINE MIR 20 101 -161 2971 212 76 37 chr2 31233018 31233638 -222022945 - L1ME1 LINE L1 -8 6953 6359 8003 52 37 1 chr2 31233638 31234322 -222022261 + LTR13 LTR ERVK 1 732 -275 222 37 0 0 chr2 31234322 31234349 -222022234 + (TC)n Simple_repeat Simple_repeat 2 28 0 8003 52 37 1 chr2 31234349 31234636 -222021947 + LTR13 LTR ERVK 732 1007 0 2971 212 76 37 chr2 31234636 31234753 -222021830 - L1ME1 LINE L1 -602 6359 6248 2185 116 10 0 chr2 31234753 31235047 -222021536 - AluSx SINE Alu -13 299 3 2971 212 76 37 chr2 31235047 31235969 -222020614 - L1ME1 LINE L1 -713 6248 5229 2888 253 75 40 chr2 31236013 31236125 -222020458 - L1ME1 LINE L1 -2887 4054 3947 2299 120 0 0 chr2 31236125 31236433 -222020150 - AluSq SINE Alu -5 308 1 2888 253 75 40 chr2 31236433 31237404 -222019179 - L1ME1 LINE L1 -2994 3947 3012 1920 185 5 78 chr2 31237404 31237825 -222018758 - MLT1B LTR MaLR 0 390 1 2888 253 75 40 chr2 31237825 31239755 -222016828 - L1ME1 LINE L1 -3929 3012 791 594 269 39 0 chr2 31240166 31240348 -222016235 - L1ME1 LINE L1 -6211 212 24 1220 290 52 38 chr2 31240627 31241317 -222015266 - L1MC4a LINE L1 -1761 6047 5348 327 286 10 0 chr2 31242666 31242764 -222013819 - MIR SINE MIR -47 215 117 482 348 17 6 chr2 31243946 31244124 -222012459 - MIR SINE MIR -59 203 24 2491 84 0 0 chr2 31244555 31244866 -222011717 + AluY SINE Alu 1 311 0 376 261 90 0 chr2 31244960 31245071 -222011512 - MIR3 SINE MIR -76 132 12 251 225 80 150 chr2 31245504 31245595 -222010988 - MIR SINE MIR -28 234 161 1203 197 33 12 chr2 31245595 31245839 -222010744 - L1MC1 LINE L1 -1 6332 6084 251 225 80 150 chr2 31245839 31245934 -222010649 - MIR SINE MIR -101 161 61 187 336 75 0 chr2 31246208 31246315 -222010268 - L2 LINE L2 -22 3250 3136 367 262 77 36 chr2 31247310 31247451 -222009132 + MER5A DNA MER1_type 4 162 -27 2177 120 7 0 chr2 31247649 31247950 -222008633 - AluSx SINE Alu -9 303 1 260 292 84 26 chr2 31248022 31248176 -222008407 + MIR SINE MIR 75 237 -25 642 237 0 53 chr2 31248176 31248366 -222008217 + LTR41 LTR ERVL 1 180 -593 260 187 13 173 chr2 31248620 31248770 -222007813 + LTR41 LTR ERVL 585 710 -63 722 120 0 0 chr2 31248770 31248870 -222007713 - AluSp/q SINE Alu -20 293 194 450 244 61 9 chr2 31248988 31249103 -222007480 - MIR SINE MIR -109 153 33 212 309 129 64 chr2 31249209 31249442 -222007141 + MIR SINE MIR 13 260 -2 442 293 156 6 chr2 31249887 31250054 -222006529 - MIR SINE MIR -50 212 21 8743 78 1 1 chr2 31250296 31251467 -222005116 + L1P LINE L1 101 1271 -4875 32430 38 4 0 chr2 31251567 31255923 -222000660 - L1P2 LINE L1 -530 5625 1258 645 312 30 5 chr2 31257153 31257352 -221999231 - MIR SINE MIR 0 262 59 263 222 42 14 chr2 31257688 31257760 -221998823 - L2 LINE L2 -8 3305 3232 472 236 203 7 chr2 31257886 31258034 -221998549 + MIR SINE MIR 10 186 -76 3183 124 61 22 chr2 31258139 31258679 -221997904 - MER57A-int LTR ERV1 -6976 561 1 2372 129 63 3 chr2 31258679 31259059 -221997524 - MER57A LTR ERV1 0 403 1 569 140 0 30 chr2 31259059 31259197 -221997386 - L1M LINE L1 -778 5402 5274 2371 95 3 0 chr2 31259959 31260265 -221996318 - AluSc SINE Alu -2 307 1 1501 196 138 49 chr2 31260587 31261016 -221995567 - MLT1C LTR MaLR 0 467 1 2325 85 3 7 chr2 31261139 31261433 -221995150 + AluSg SINE Alu 1 293 -17 359 247 155 32 chr2 31262176 31262395 -221994188 - L1ME4a LINE L1 -28 6093 5848 255 346 10 0 chr2 31262887 31262988 -221993595 - MIR SINE MIR -110 152 51 999 232 51 42 chr2 31263242 31263578 -221993005 + LTR16A LTR ERVL 106 444 -6 423 283 113 31 chr2 31263876 31263992 -221992591 - MER5B DNA MER1_type 0 178 42 1703 25 10 0 chr2 31263992 31264218 -221992365 + L1PA4 LINE L1 5940 6167 0 423 283 113 31 chr2 31264218 31264258 -221992325 - MER5B DNA MER1_type -136 42 7 547 262 48 14 chr2 31264509 31264654 -221991929 + MER5A DNA MER1_type 39 188 -1 233 56 0 28 chr2 31265719 31265755 -221990828 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 513 71 0 14 chr2 31265755 31265825 -221990758 - L1PA4 LINE L1 -24 6131 6063 517 274 109 71 chr2 31265925 31266191 -221990392 - L3 LINE CR1 -694 883 608 380 220 0 100 chr2 31266397 31266497 -221990086 + L1MC4 LINE L1 6614 6703 -1339 * 394 207 38 7 chr2 31266425 31266521 -221990062 - L1MC4 LINE L1 -1339 6983 1995 1384 267 39 5 chr2 31266918 31267530 -221989053 + L1ME LINE L1 5167 5801 -361 586 197 84 0 chr2 31267613 31267636 -221988947 - L1MA10 LINE L1 -1 6333 6311 6164 223 85 22 chr2 31267636 31270620 -221985963 - L1ME1 LINE L1 -23 6143 2815 267 272 228 0 chr2 31270810 31270924 -221985659 - MIR SINE MIR 0 262 123 291 228 18 0 chr2 31271256 31271313 -221985270 - L2 LINE L2 -7 3306 3249 610 148 99 68 chr2 31271594 31271756 -221984827 + MLT1B LTR MaLR 7 173 -217 573 145 92 72 chr2 31271748 31271854 -221984729 + MLT1B LTR MaLR 301 412 -55 * 998 31 78 8 chr2 31271854 31271982 -221984601 - MER85 DNA T2_type 0 139 3 573 145 92 72 chr2 31271982 31272027 -221984556 + MLT1B LTR MaLR 412 455 -12 493 314 0 19 chr2 31272894 31273050 -221983533 - MIR SINE MIR -2 260 108 489 125 12 12 chr2 31273669 31273749 -221982834 + MER116 DNA Mariner 1 80 0 317 344 121 9 chr2 31274316 31274540 -221982043 - MIR SINE MIR -8 254 6 205 228 238 10 chr2 31275691 31275792 -221980791 + MIR SINE MIR 23 146 -116 243 206 16 32 chr2 31276395 31276458 -221980125 - MIR SINE MIR -1 261 200 211 306 85 0 chr2 31277435 31277526 -221979057 - MIR SINE MIR -60 148 53 755 289 74 8 chr2 31277842 31278084 -221978499 - MIR SINE MIR 0 262 5 340 289 88 18 chr2 31278245 31278359 -221978224 + MIR SINE MIR 141 262 0 2224 107 3 0 chr2 31278557 31278857 -221977726 - AluSx SINE Alu -11 301 1 206 214 57 29 chr2 31279188 31279258 -221977325 + CT-rich Low_complexity Low_complexity 4 75 0 400 325 8 0 chr2 31279588 31279705 -221976878 - MIR SINE MIR -14 248 131 1240 150 14 10 chr2 31279705 31279912 -221976671 + MER3 DNA MER1_type 1 208 -1 273 89 44 0 chr2 31280798 31280843 -221975740 - MLT2B1 LTR ERVL 0 515 469 1165 209 27 51 chr2 31280935 31281391 -221975192 - MLT2B1 LTR ERVL -32 488 1 232 271 176 12 chr2 31281497 31281582 -221975001 + MIR SINE MIR 17 115 -147 208 317 84 56 chr2 31281586 31281728 -221974855 + MER5B DNA MER1_type 4 149 -29 229 248 60 53 chr2 31282223 31282356 -221974227 - L1 LINE L1 -2196 3950 3817 410 289 112 67 chr2 31282533 31282907 -221973676 - L1 LINE L1 -2465 3681 3291 499 27 0 95 chr2 31282962 31283036 -221973547 - MADE1 DNA Mariner 0 80 14 254 259 37 0 chr2 31283283 31283337 -221973246 - MIR SINE MIR -7 255 200 355 245 27 58 chr2 31283466 31283621 -221972962 - MIR SINE MIR -65 143 40 377 272 53 18 chr2 31285535 31285649 -221970934 - MIR3 SINE MIR -53 155 38 1704 100 77 4 chr2 31286354 31286614 -221969969 + AluSx SINE Alu 1 279 -33 962 304 59 23 chr2 31287219 31287910 -221968673 - L1M4 LINE L1 -1353 4793 4078 1618 306 116 62 chr2 31287956 31289418 -221967165 - L1M4 LINE L1 -2385 3761 2221 428 302 103 53 chr2 31289525 31289744 -221966839 - HAL1 LINE L1 -860 1647 1440 2156 88 3 26 chr2 31289744 31290049 -221966534 + AluSc SINE Alu 1 298 -11 428 302 103 53 chr2 31290049 31290246 -221966337 - HAL1 LINE L1 -1067 1440 1210 258 139 0 0 chr2 31290251 31290287 -221966296 - MER5A DNA MER1_type -139 50 15 269 250 119 12 chr2 31290879 31290963 -221965620 - L2 LINE L2 -31 3282 3190 470 241 44 29 chr2 31290987 31291124 -221965459 - MIR SINE MIR -70 192 54 227 311 0 29 chr2 31291891 31291994 -221964589 + L2 LINE L2 2922 3021 -251 214 320 113 0 chr2 31292111 31292208 -221964375 - MIR SINE MIR -83 125 18 252 267 35 76 chr2 31292811 31292983 -221963600 - L2 LINE L2 -144 3128 2964 353 194 0 16 chr2 31293224 31293286 -221963297 - L2 LINE L2 -5 3308 3248 288 77 0 0 chr2 31293940 31293979 -221962604 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 184 247 117 52 chr2 31294787 31294864 -221961719 - L2 LINE L2 -40 3232 3151 516 236 24 16 chr2 31295388 31295511 -221961072 - MIR3 SINE MIR 0 208 85 217 241 57 82 chr2 31296987 31297145 -221959438 - MIR3 SINE MIR -15 193 40 230 224 57 85 chr2 31297995 31298103 -221958480 - MIR SINE MIR -105 103 8 244 316 58 36 chr2 31298639 31298778 -221957805 - MIR SINE MIR -52 210 69 718 252 89 65 chr2 31299917 31300323 -221956260 - MLT1J LTR MaLR -2 444 19 229 322 83 33 chr2 31300403 31300524 -221956059 - MIR SINE MIR -56 152 26 308 273 23 11 chr2 31300954 31301042 -221955541 + MER117 DNA MER1_type 109 197 0 322 225 45 11 chr2 31301490 31301579 -221955004 - MER103 DNA DNA -11 155 64 1537 67 5 19 chr2 31302346 31302556 -221954027 + AluY SINE Alu 83 289 -22 294 248 73 37 chr2 31302888 31302997 -221953586 + MIR SINE MIR 19 131 -131 734 194 9 4 chr2 31303384 31303620 -221952963 + GA-rich Low_complexity Low_complexity 1 237 0 333 130 0 0 chr2 31303789 31303835 -221952748 - Alu SINE Alu -254 46 1 456 208 94 44 chr2 31304389 31304548 -221952035 + L1ME3A LINE L1 5968 6134 -36 265 287 45 32 chr2 31304696 31304853 -221951730 + L2 LINE L2 3122 3280 -33 245 293 24 0 chr2 31304879 31304961 -221951622 + GA-rich Low_complexity Low_complexity 2 85 0 261 304 10 10 chr2 31306142 31306244 -221950339 - Charlie7 DNA MER1_type -3 2609 2508 307 282 107 0 chr2 31306360 31306463 -221950120 - MIR SINE MIR -62 146 33 216 317 30 30 chr2 31307495 31307596 -221948987 - MER5A DNA MER1_type -2 187 87 273 267 178 0 chr2 31307800 31307890 -221948693 + L2 LINE L2 3208 3313 0 243 61 0 0 chr2 31308324 31308357 -221948226 + (TTG)n Simple_repeat Simple_repeat 2 34 0 271 245 75 43 chr2 31308471 31308565 -221948018 - MIR SINE MIR -110 152 56 1586 118 9 129 chr2 31308677 31309009 -221947574 + AluJb SINE Alu 1 292 -20 695 261 16 16 chr2 31309074 31309258 -221947325 + MIR SINE MIR 79 262 0 1976 110 0 7 chr2 31310268 31310550 -221946033 + AluSx SINE Alu 15 294 -18 330 26 0 0 chr2 31312268 31312307 -221944276 + (CA)n Simple_repeat Simple_repeat 2 40 0 200 268 36 36 chr2 31312983 31313095 -221943488 + (TCTCTG)n Simple_repeat Simple_repeat 3 114 0 2127 97 30 0 chr2 31313125 31313423 -221943160 - AluSg SINE Alu -1 309 3 321 287 78 8 chr2 31314119 31314248 -221942335 - MIR3 SINE MIR -7 201 64 2228 71 0 3 chr2 31314567 31314967 -221941616 - AluY SINE Alu 0 399 1 243 267 22 0 chr2 31315545 31315680 -221940903 + CT-rich Low_complexity Low_complexity 1 138 0 951 156 0 36 chr2 31316522 31316689 -221939894 - MER3 DNA MER1_type -27 182 22 509 278 81 56 chr2 31317168 31317402 -221939181 - MIR SINE MIR -21 241 2 218 375 29 10 chr2 31317685 31317789 -221938794 - MER91A DNA MER1_type -2 194 89 218 350 88 57 chr2 31318098 31318395 -221938188 + L2 LINE L2 2949 3254 -18 318 293 17 35 chr2 31318426 31318542 -221938041 + MIR SINE MIR 124 237 -25 21 0 0 0 chr2 31318742 31318763 -221937820 + AT_rich Low_complexity Low_complexity 1 21 0 231 88 0 0 chr2 31319026 31319060 -221937523 + (TA)n Simple_repeat Simple_repeat 1 34 0 565 203 68 8 chr2 31319060 31319169 -221937414 - FLAM_C SINE Alu -183 119 1 26 0 0 0 chr2 31319662 31319688 -221936895 + AT_rich Low_complexity Low_complexity 1 26 0 1853 82 4 0 chr2 31319712 31319943 -221936640 - AluSx SINE Alu -80 232 1 2333 74 7 3 chr2 31320581 31320879 -221935704 - AluSc SINE Alu -9 300 2 23 0 0 0 chr2 31320917 31320940 -221935643 + AT_rich Low_complexity Low_complexity 1 23 0 351 255 150 13 chr2 31321463 31321616 -221934967 + MIR SINE MIR 59 232 -30 461 301 26 13 chr2 31322889 31323045 -221933538 + MLT1L LTR MaLR 144 301 -314 1575 193 50 34 chr2 31323936 31324319 -221932264 + MLT1B LTR MaLR 1 389 -1 308 302 70 8 chr2 31324553 31324682 -221931901 - L1ME LINE L1 -502 5619 5483 2405 87 0 0 chr2 31324710 31325009 -221931574 - AluSq SINE Alu -14 299 1 622 294 128 64 chr2 31325187 31326338 -221930245 - L1ME LINE L1 -768 5378 4155 23 0 0 0 chr2 31327356 31327379 -221929204 + AT_rich Low_complexity Low_complexity 1 23 0 636 286 117 40 chr2 31327396 31327791 -221928792 + L1ME LINE L1 2877 3301 -2845 263 213 16 0 chr2 31327810 31327871 -221928712 + L1MD2 LINE L1 6096 6157 -202 205 194 0 0 chr2 31328192 31328228 -221928355 - MIR SINE MIR -13 249 214 * 263 259 69 35 chr2 31328222 31328338 -221928245 - L2 LINE L2 -2 3270 3151 222 217 301 12 chr2 31328360 31328443 -221928140 - MIR SINE MIR -31 177 71 188 245 75 19 chr2 31328497 31328550 -221928033 + MIR SINE MIR 6 61 -201 16336 127 101 8 chr2 31328860 31330930 -221925653 - L1PBa LINE L1 -2818 4044 2168 2415 82 0 3 chr2 31330930 31331236 -221925347 + AluY SINE Alu 1 305 -6 16336 127 101 8 chr2 31331236 31332858 -221923725 - L1PBa LINE L1 -4694 2168 3 743 173 6 39 chr2 31332865 31333021 -221923562 - MLT1A1 LTR MaLR -214 151 1 457 232 94 29 chr2 31333163 31333301 -221923282 + MLT1C LTR MaLR 6 152 -315 805 264 63 17 chr2 31333327 31333566 -221923017 + MLT1C LTR MaLR 218 467 0 394 259 75 34 chr2 31333875 31334022 -221922561 - MER5A DNA MER1_type 0 189 37 195 354 20 40 chr2 31334108 31334207 -221922376 + MIR SINE MIR 14 110 -152 28 0 0 0 chr2 31334258 31334286 -221922297 + AT_rich Low_complexity Low_complexity 1 28 0 2196 194 95 27 chr2 31335338 31335563 -221921020 + L1ME LINE L1 4120 4328 -1818 1302 84 68 0 chr2 31335563 31335753 -221920830 - L1PA14 LINE L1 -1 6160 5958 2196 194 95 27 chr2 31335753 31336202 -221920381 + L1ME LINE L1 4328 4840 -1306 * 3107 228 75 18 chr2 31336201 31337249 -221919334 + L1ME1 LINE L1 5055 6162 -4 3671 265 155 22 chr2 31338725 31339843 -221916740 + L2 LINE L2 1217 2601 -713 8187 55 1 0 chr2 31339843 31340808 -221915775 + LTR5 LTR ERVK 1 966 -3 3671 265 155 22 chr2 31340808 31341243 -221915340 + L2 LINE L2 2601 2977 -337 197 339 24 94 chr2 31344372 31344499 -221912084 - L2 LINE L2 -44 3228 3111 302 299 187 23 chr2 31344744 31344958 -221911625 + L1ME LINE L1 4809 5057 -1089 496 345 20 12 chr2 31345268 31345458 -221911125 + L1ME LINE L1 5452 5639 -523 6297 113 123 18 chr2 31345458 31345967 -221910616 - Tigger3b DNA MER2_type -1797 1231 777 1858 107 76 0 chr2 31345967 31346229 -221910354 - AluSx SINE Alu -15 297 16 6297 113 123 18 chr2 31346229 31346382 -221910201 - Tigger3b DNA MER2_type -2251 777 641 369 0 0 0 chr2 31346382 31346423 -221910160 + (CA)n Simple_repeat Simple_repeat 2 42 0 6297 113 123 18 chr2 31346423 31346873 -221909710 - Tigger3b DNA MER2_type -2387 641 1 496 345 20 12 chr2 31346873 31346928 -221909655 + L1ME LINE L1 5639 5699 -463 1450 64 0 6 chr2 31346933 31347106 -221909477 + AluY SINE Alu 1 172 -139 6121 114 10 2 chr2 31347106 31348228 -221908355 - L1PA8A LINE L1 -562 5569 4442 1439 122 0 80 chr2 31348228 31348491 -221908092 + MER1B DNA MER1_type 98 339 0 217 195 0 0 chr2 31349260 31349301 -221907282 - L3 LINE CR1 -23 1554 1514 322 302 47 59 chr2 31349335 31349504 -221907079 - L3 LINE CR1 -156 1421 1255 667 37 0 0 chr2 31349585 31349667 -221906916 - AluSc SINE Alu -7 302 221 1005 179 115 8 chr2 31349667 31349901 -221906682 + MER58B DNA MER1_type 77 335 -6 262 259 0 0 chr2 31349928 31349986 -221906597 - L3 LINE CR1 -326 1251 1194 2085 242 122 28 chr2 31350184 31350960 -221905623 - HAL1 LINE L1 -302 2205 1357 361 333 94 28 chr2 31351124 31351337 -221905246 - MIR SINE MIR -25 237 11 216 130 0 0 chr2 31352361 31352407 -221904176 + (TA)n Simple_repeat Simple_repeat 1 46 0 2562 229 27 13 chr2 31353012 31353688 -221902895 + L1PA10 LINE L1 1180 1864 -4282 1878 144 14 22 chr2 31353699 31354059 -221902524 - L1P LINE L1 -2963 3183 2827 20604 125 23 12 chr2 31354073 31354981 -221901602 + L1PA10 LINE L1 1875 2771 -3397 2200 112 6 6 chr2 31354981 31355293 -221901290 + AluSx SINE Alu 1 312 0 20604 125 23 12 chr2 31355293 31358618 -221897965 + L1PA10 LINE L1 2771 6157 -11 1011 129 0 0 chr2 31360322 31360462 -221896121 - AluJb SINE Alu -13 299 160 1384 156 8 0 chr2 31360619 31360863 -221895720 + L1MA4 LINE L1 4559 4804 -1342 3084 148 56 21 chr2 31360863 31361468 -221895115 + L1MA4 LINE L1 5663 6291 -9 1305 154 5 19 chr2 31361768 31361982 -221894601 - AluJb SINE Alu -20 292 82 402 321 153 0 chr2 31362156 31362287 -221894296 - L2 LINE L2 0 3272 3122 297 317 97 41 chr2 31362504 31362649 -221893934 + L2 LINE L2 3114 3266 -6 245 259 139 28 chr2 31362898 31363006 -221893577 - MIR SINE MIR -13 249 130 209 33 33 0 chr2 31363713 31363743 -221892840 + (TA)n Simple_repeat Simple_repeat 1 31 0 2153 104 3 44 chr2 31365362 31365678 -221890905 + AluSp SINE Alu 1 303 -10 225 377 0 0 chr2 31367014 31367083 -221889500 - L3b LINE CR1 -3 1580 1512 231 356 100 21 chr2 31367097 31367378 -221889205 - L2 LINE L2 -1298 2016 1714 1235 199 106 73 chr2 31367670 31367999 -221888584 + MLT1C LTR MaLR 59 405 -62 1987 65 52 14 chr2 31367999 31368290 -221888293 - AluY SINE Alu -9 302 1 1235 199 106 73 chr2 31368290 31368356 -221888227 + MLT1C LTR MaLR 405 467 0 189 0 0 0 chr2 31369292 31369313 -221887270 + (T)n Simple_repeat Simple_repeat 1 21 0 1620 117 21 0 chr2 31370118 31370357 -221886226 + L1PA8A LINE L1 5886 6129 -2 205 216 0 39 chr2 31372038 31372089 -221884494 + G-rich Low_complexity Low_complexity 2 50 0 189 200 0 44 chr2 31372135 31372180 -221884403 - L2 LINE L2 -94 3219 3177 3568 146 30 6 chr2 31372215 31372839 -221883744 - L1MA5 LINE L1 -3 6297 5659 190 312 194 24 chr2 31373541 31373871 -221882712 + L2 LINE L2 1565 1950 -1364 184 75 25 50 chr2 31375223 31375263 -221881320 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 207 0 0 0 chr2 31376451 31376474 -221880109 + (GAA)n Simple_repeat Simple_repeat 2 24 0 472 210 55 105 chr2 31377041 31377199 -221879384 + LTR50 LTR ERVL 570 714 -81 2130 110 3 0 chr2 31377199 31377491 -221879092 - AluSq SINE Alu -20 293 1 472 210 55 105 chr2 31377491 31377570 -221879013 + LTR50 LTR ERVL 714 795 0 1958 126 27 0 chr2 31377621 31377915 -221878668 - AluSx SINE Alu -10 302 1 1148 50 0 0 chr2 31378272 31378413 -221878170 + AluY SINE Alu 153 293 -18 180 313 0 30 chr2 31379067 31379134 -221877449 - MIR SINE MIR -110 98 34 378 0 0 0 chr2 31379291 31379333 -221877250 + (T)n Simple_repeat Simple_repeat 1 42 0 558 246 64 23 chr2 31379609 31379780 -221876803 - MIR3 SINE MIR -28 180 3 209 319 69 14 chr2 31379819 31379891 -221876692 - L2 LINE L2 0 3272 3197 2194 86 6 16 chr2 31380734 31381048 -221875535 + AluSq SINE Alu 1 311 -2 279 321 152 18 chr2 31381655 31381820 -221874763 + MER5A DNA MER1_type 1 187 -2 252 154 11 165 chr2 31382568 31382659 -221873924 + LTR33A LTR ERVL 447 523 0 19202 50 6 0 chr2 31382922 31386097 -221870486 - L1PA5 LINE L1 -1 6153 2967 1413 257 137 25 chr2 31388860 31389544 -221867039 - HAL1 LINE L1 -27 2480 1720 321 281 53 35 chr2 31389907 31390021 -221866562 - MER91B DNA MER1_type 0 190 75 5130 197 45 12 chr2 31391186 31393330 -221863253 + L1MB8 LINE L1 3958 6177 -1 434 351 52 30 chr2 31393469 31393871 -221862712 - L2 LINE L2 -353 2961 2551 232 314 151 21 chr2 31393877 31394116 -221862467 - L2 LINE L2 -1517 1797 1528 498 284 103 17 chr2 31394889 31395121 -221861462 + L3 LINE CR1 1213 1464 -113 336 302 74 7 chr2 31395190 31395339 -221861244 - MIR3 SINE MIR -15 193 35 709 128 120 8 chr2 31398474 31398607 -221857976 + MER5A DNA MER1_type 2 149 -40 1031 256 20 16 chr2 31399803 31400049 -221856534 + MIR SINE MIR 7 253 -9 204 297 108 47 chr2 31400177 31400325 -221856258 - MIR3 SINE MIR -45 163 7 218 287 129 0 chr2 31400490 31400591 -221855992 - L2 LINE L2 -1 3271 3158 190 315 188 13 chr2 31401022 31401171 -221855412 - L2 LINE L2 -488 2826 2652 218 242 47 94 chr2 31402142 31402270 -221854313 - L2 LINE L2 -509 2805 2684 421 280 105 17 chr2 31402758 31402944 -221853639 + MIR SINE MIR 2 215 -47 360 0 0 0 chr2 31402944 31402984 -221853599 + (CA)n Simple_repeat Simple_repeat 2 41 0 421 280 105 17 chr2 31402984 31403036 -221853547 + MIR SINE MIR 215 261 -1 308 127 18 0 chr2 31403836 31403891 -221852692 + (TG)n Simple_repeat Simple_repeat 1 56 0 2188 110 0 0 chr2 31405061 31405369 -221851214 - AluSg SINE Alu -1 309 2 399 299 108 0 chr2 31405512 31405669 -221850914 + MER91A DNA MER1_type 22 195 -1 298 283 97 0 chr2 31405904 31406017 -221850566 - L2 LINE L2 -5 3267 3144 366 271 83 14 chr2 31407602 31407746 -221848837 + MER117 DNA MER1_type 6 159 -38 198 236 281 0 chr2 31408050 31408139 -221848444 + L2 LINE L2 3004 3117 -155 2061 123 13 0 chr2 31410872 31411174 -221845409 - AluSx SINE Alu -6 306 1 263 314 86 0 chr2 31412172 31412277 -221844306 - MIR SINE MIR -50 212 99 261 231 66 99 chr2 31413962 31414083 -221842500 + MIR SINE MIR 32 148 -60 1225 162 44 9 chr2 31414135 31414363 -221842220 + MER46A DNA MER2_type 1 236 0 400 220 110 28 chr2 31414614 31414723 -221841860 + MIR SINE MIR 31 148 -60 3822 80 19 13 chr2 31414915 31415443 -221841140 + L1PA14 LINE L1 5622 6152 -9 544 245 138 0 chr2 31415647 31415806 -221840777 - MER5A DNA MER1_type 0 189 9 181 300 130 30 chr2 31416338 31416438 -221840145 + MIR SINE MIR 43 152 -56 236 308 64 30 chr2 31417562 31417717 -221838866 - MIR SINE MIR -76 132 3 437 352 139 27 chr2 31419488 31420409 -221836174 + L2 LINE L2 2211 3243 -29 194 268 29 138 chr2 31422721 31422859 -221833724 + L2 LINE L2 3143 3265 -7 221 95 0 48 chr2 31423723 31423765 -221832818 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 239 355 50 14 chr2 31474028 31474169 -221782414 - MIR SINE MIR -114 148 3 267 79 0 0 chr2 31475170 31475208 -221781375 + (GA)n Simple_repeat Simple_repeat 1 38 0 249 279 72 27 chr2 31475210 31475321 -221781262 + MIR SINE MIR 16 131 -77 180 356 0 61 chr2 31475723 31475838 -221780745 - L2 LINE L2 -231 3041 2934 420 225 108 36 chr2 31475849 31475960 -221780623 - L2 LINE L2 -16 3256 3138 207 339 172 42 chr2 31476010 31477014 -221779569 - L2 LINE L2 -423 2891 1757 466 368 73 42 chr2 31477047 31477498 -221779085 - L2 LINE L2 0 3272 2808 656 284 177 36 chr2 31477819 31478378 -221778205 + L1MB7 LINE L1 3145 3782 -2364 3991 206 66 15 chr2 31478380 31480127 -221776456 + L1MB7 LINE L1 4334 6168 -16 657 279 110 62 chr2 31480219 31480908 -221775675 + L1ME4a LINE L1 5255 5964 -157 232 285 98 65 chr2 31480955 31481078 -221775505 - L2 LINE L2 -613 2701 2575 310 265 0 12 chr2 31481764 31481847 -221774736 - MIR SINE MIR -94 168 87 202 346 64 0 chr2 31481981 31482059 -221774524 - L2 LINE L2 -1 3271 3189 220 286 78 0 chr2 31482069 31482146 -221774437 - L2 LINE L2 -53 3219 3137 1015 188 12 0 chr2 31482209 31482379 -221774204 - AluJo SINE Alu -19 293 122 1547 111 9 9 chr2 31482429 31482655 -221773928 + MSTA LTR MaLR 1 226 -202 9220 165 16 3 chr2 31482655 31484182 -221772401 + L1MA3 LINE L1 1181 2727 -4838 741 82 0 0 chr2 31484184 31484282 -221772301 + L1PA5 LINE L1 1 98 -6048 * 16069 61 5 2 chr2 31484280 31486347 -221770236 + L1PA5 LINE L1 847 2918 -3228 1677 52 9 5 chr2 31486347 31486553 -221770030 + L1PA4 LINE L1 5943 6154 -1 * 21245 39 3 1 chr2 31486542 31489759 -221766824 + L1PA5 LINE L1 2913 6139 -15 14125 152 22 27 chr2 31489787 31492571 -221764012 + L1MA3 LINE L1 4004 6777 -947 2174 116 0 26 chr2 31492571 31492881 -221763702 - AluSx SINE Alu -7 305 4 14125 152 22 27 chr2 31492881 31493825 -221762758 + L1MA3 LINE L1 6777 7724 0 2091 136 3 0 chr2 31493924 31494218 -221762365 - AluSx SINE Alu -17 295 1 2513 46 0 26 chr2 31494224 31494528 -221762055 - AluY SINE Alu -15 296 1 352 234 200 88 chr2 31495646 31496125 -221760458 - MLT1H LTR MaLR -16 533 1 23 0 0 0 chr2 31496748 31496771 -221759812 + AT_rich Low_complexity Low_complexity 1 23 0 559 251 152 0 chr2 31496925 31497096 -221759487 + MIR SINE MIR 25 221 -41 207 0 0 0 chr2 31497864 31497887 -221758696 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1506 203 0 31 chr2 31497889 31498179 -221758404 - AluJb SINE Alu -31 281 1 2282 84 3 14 chr2 31499176 31499472 -221757111 + AluSq SINE Alu 1 293 -20 183 237 0 0 chr2 31499538 31499576 -221757007 + MIR SINE MIR 107 144 -64 191 279 98 49 chr2 31499654 31499776 -221756807 + MIR SINE MIR 125 252 -10 187 304 0 0 chr2 31499794 31499850 -221756733 + MIR3 SINE MIR 151 206 -2 657 242 0 0 chr2 31500399 31500531 -221756052 - MER3 DNA MER1_type -77 132 1 218 264 100 45 chr2 31500649 31500759 -221755824 + MIR SINE MIR 26 141 -67 251 241 79 44 chr2 31501640 31501761 -221754822 + MIR SINE MIR 22 144 -64 312 291 133 33 chr2 31502047 31502198 -221754385 - L3 LINE CR1 -5 1572 1407 505 204 19 0 chr2 31502374 31502482 -221754101 + MER117 DNA MER1_type 36 145 -52 350 301 59 36 chr2 31502600 31502819 -221753764 + MLT1K LTR MaLR 7 230 -358 480 282 98 39 chr2 31502933 31503167 -221753416 + MLT1L LTR MaLR 345 592 -23 270 311 149 6 chr2 31503181 31503342 -221753241 - L3 LINE CR1 -263 1314 1131 372 141 0 6 chr2 31503960 31504027 -221752556 + AluSq SINE Alu 1 55 -245 2881 3 0 6 chr2 31504027 31504340 -221752243 + AluYa5 SINE Alu 1 311 0 1814 132 8 0 chr2 31504340 31504605 -221751978 + AluSq SINE Alu 44 311 -2 463 101 25 0 chr2 31504605 31504684 -221751899 + GA-rich Low_complexity Low_complexity 1 81 0 4293 148 30 26 chr2 31504882 31505645 -221750938 - L1MB4 LINE L1 0 6180 5415 269 302 168 13 chr2 31505889 31506038 -221750545 + MIR SINE MIR 84 255 -7 466 323 18 6 chr2 31506437 31506604 -221749979 - MIR SINE MIR -61 201 33 2558 160 38 7 chr2 31507570 31507989 -221748594 + MSTB1 LTR MaLR 1 432 0 373 258 57 16 chr2 31508110 31508234 -221748349 + MIR SINE MIR 20 148 -114 979 251 184 0 chr2 31508250 31508657 -221747926 + L2 LINE L2 2608 3072 -241 994 160 105 6 chr2 31508658 31508839 -221747744 + AluJo SINE Alu 1 199 -113 386 264 106 0 chr2 31508844 31508987 -221747596 - L1M4 LINE L1 -375 5680 5536 1934 221 70 10 chr2 31509268 31509881 -221746702 - L1M4 LINE L1 -2099 3981 3299 * 4242 116 4 4 chr2 31509852 31510907 -221745676 - L1P4 LINE L1 -397 5705 4653 * 10264 127 6 0 chr2 31510903 31512458 -221744125 + L1P LINE L1 2988 4552 -1594 2094 276 53 49 chr2 31512474 31514075 -221742508 - L1ME LINE L1 -4596 1665 20 280 323 219 0 chr2 31514547 31514739 -221741844 + MIR SINE MIR 20 253 -9 616 354 97 38 chr2 31517367 31518107 -221738476 + L2 LINE L2 1881 2664 -650 468 214 50 50 chr2 31518445 31518604 -221737979 - L1MC5 LINE L1 -47 7914 7756 209 267 0 0 chr2 31519471 31519516 -221737067 + G-rich Low_complexity Low_complexity 2 46 0 397 273 118 25 chr2 31519673 31519834 -221736749 + MER69A DNA AcHobo 1 176 -1 212 296 0 14 chr2 31519850 31519921 -221736662 + CT-rich Low_complexity Low_complexity 3 72 0 3977 167 64 25 chr2 31522275 31523440 -221733143 - L1MB5 LINE L1 -1 6173 4960 622 276 43 27 chr2 31523818 31524075 -221732508 + MIR SINE MIR 2 262 0 201 250 210 89 chr2 31525079 31525203 -221731380 - MIR SINE MIR -70 192 54 378 328 53 10 chr2 31525866 31526069 -221730514 + MIR SINE MIR 38 247 -15 231 277 0 46 chr2 31526720 31526785 -221729798 + MER5A DNA MER1_type 26 87 -102 * 313 206 0 41 chr2 31526732 31526805 -221729778 - MER5A DNA MER1_type -24 165 96 399 324 29 42 chr2 31527473 31527785 -221728798 + HAL1 LINE L1 619 926 -1581 248 284 35 28 chr2 31527891 31528032 -221728551 + HAL1 LINE L1 1405 1546 -961 1637 208 96 17 chr2 31528038 31528457 -221728126 + LTR40b LTR ERVL 11 462 0 976 278 112 30 chr2 31528458 31529254 -221727329 + HAL1 LINE L1 1543 2403 -104 350 297 69 47 chr2 31529608 31529840 -221726743 + MIR SINE MIR 20 256 -6 237 277 0 0 chr2 31531401 31531448 -221725135 + L2 LINE L2 3215 3261 -11 480 322 60 6 chr2 31531520 31531703 -221724880 + MIR SINE MIR 60 252 -10 590 291 50 59 chr2 31531907 31532168 -221724415 + MIR SINE MIR 7 257 -5 1698 176 78 23 chr2 31533524 31533870 -221722713 + MLT1A1 LTR MaLR 1 365 0 570 314 28 8 chr2 31533949 31534201 -221722382 - MIR SINE MIR -4 258 2 185 240 146 31 chr2 31534583 31534679 -221721904 - L3 LINE CR1 -545 1032 926 215 253 67 40 chr2 31536059 31536134 -221720449 - L2 LINE L2 -2 3311 3235 325 284 53 49 chr2 31536573 31536798 -221719785 + L1MEd LINE L1 502 727 -5392 321 265 20 10 chr2 31536961 31537063 -221719520 + (CATATA)n Simple_repeat Simple_repeat 3 105 0 197 206 0 32 chr2 31537077 31537140 -221719443 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 341 285 32 49 chr2 31537144 31537267 -221719316 + L1MC4 LINE L1 6588 6708 -1334 1379 251 165 35 chr2 31538825 31539346 -221717237 + MLT1E LTR MaLR 1 589 -4 186 291 36 0 chr2 31539617 31539672 -221716911 + MER5A DNA MER1_type 69 125 -64 41477 34 22 1 chr2 31539739 31545764 -221710819 + L1PA2 LINE L1 2 6155 0 447 284 81 7 chr2 31545775 31545923 -221710660 - MIR3 SINE MIR -48 160 2 421 308 24 1 chr2 31547151 31547295 -221709288 - MIR SINE MIR -56 152 36 348 229 30 38 chr2 31549322 31549453 -221707130 + L1MC5 LINE L1 7796 7925 -36 189 0 0 0 chr2 31549598 31549619 -221706964 + (CTG)n Simple_repeat Simple_repeat 2 22 0 832 229 84 0 chr2 31549619 31549798 -221706785 - MIR SINE MIR 0 262 69 632 281 94 0 chr2 31550216 31550408 -221706175 - MER115 DNA AcHobo -333 360 151 5330 62 8 5 chr2 31551287 31551951 -221704632 + PABL_B LTR ERV1 1 666 -1 2401 113 0 0 chr2 31552337 31552646 -221703937 + AluSg SINE Alu 1 309 -1 731 228 31 5 chr2 31552756 31552949 -221703634 + MER20 DNA MER1_type 21 218 -1 313 281 211 4 chr2 31553177 31553348 -221703235 - MIR SINE MIR -35 227 13 609 310 90 0 chr2 31553803 31554003 -221702580 + MIR SINE MIR 28 245 -17 272 213 33 49 chr2 31554164 31554347 -221702236 + (CAGG)n Simple_repeat Simple_repeat 1 180 0 226 313 49 6 chr2 31554288 31554451 -221702132 + (GGGTG)n Simple_repeat Simple_repeat 1 170 0 * 221 267 85 115 chr2 31555697 31555862 -221700721 + MIR SINE MIR 20 179 -83 318 87 0 0 chr2 31556171 31556217 -221700366 + (CA)n Simple_repeat Simple_repeat 2 47 0 852 198 35 70 chr2 31557280 31557507 -221699076 + MER20 DNA MER1_type 1 219 0 231 343 79 30 chr2 31557965 31558230 -221698353 + L2 LINE L2 2807 3084 -188 2381 87 0 3 chr2 31558597 31558895 -221697688 - AluSq SINE Alu -7 306 10 322 245 41 82 chr2 31560813 31560911 -221695672 - L2 LINE L2 0 3313 3220 328 335 90 16 chr2 31561244 31561489 -221695094 - L2 LINE L2 -498 2816 2554 200 346 12 0 chr2 31561663 31561744 -221694839 + L2 LINE L2 3189 3270 -43 648 321 133 51 chr2 31561811 31562640 -221693943 - L2 LINE L2 -810 2504 1608 619 217 34 51 chr2 31562670 31562845 -221693738 + MER5B DNA MER1_type 3 174 -4 294 262 326 7 chr2 31562860 31563001 -221693582 + MER5A DNA MER1_type 4 189 0 202 321 151 61 chr2 31563085 31563696 -221692887 - L2 LINE L2 -1749 1565 900 387 279 91 36 chr2 31563956 31564121 -221692462 + MIR SINE MIR 32 205 -57 32 0 0 0 chr2 31564132 31564164 -221692419 + AT_rich Low_complexity Low_complexity 1 32 0 2344 87 0 0 chr2 31564168 31564455 -221692128 - AluSg SINE Alu -23 287 1 1983 117 36 42 chr2 31565249 31565607 -221690976 - MER46B DNA MER2_type 0 236 6 206 208 94 0 chr2 31567879 31567932 -221688651 + MIR SINE MIR 118 175 -87 456 313 85 11 chr2 31568026 31568202 -221688381 + L3 LINE CR1 1207 1395 -182 692 244 41 0 chr2 31568641 31568813 -221687770 - MER97c DNA MER1_type? -911 179 1 213 312 33 23 chr2 31569287 31569417 -221687166 + MIR SINE MIR 58 189 -64 187 227 91 45 chr2 31572801 31572867 -221683716 - MIR SINE MIR -50 212 144 1976 197 87 20 chr2 31572900 31573392 -221683191 - MLT1E2 LTR MaLR -99 527 3 279 264 110 0 chr2 31573402 31573493 -221683090 - MIR SINE MIR -116 146 46 257 50 0 25 chr2 31573830 31573870 -221682713 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 0 0 0 chr2 31573900 31573926 -221682657 + (CA)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr2 31573925 31573949 -221682634 + (TC)n Simple_repeat Simple_repeat 2 25 0 * 395 363 77 37 chr2 31575885 31576158 -221680425 + L3 LINE CR1 1238 1521 -56 470 244 17 8 chr2 31576783 31576902 -221679681 - L2 LINE L2 -5 3308 3189 1824 154 46 44 chr2 31578356 31578745 -221677838 + MLT1B LTR MaLR 1 390 0 209 238 48 67 chr2 31578918 31579023 -221677560 - MIR SINE MIR -88 120 18 300 326 86 23 chr2 31581443 31581618 -221674965 + MIR3 SINE MIR 20 205 -3 2979 99 0 14 chr2 31581793 31582227 -221674356 + MSTA LTR MaLR 1 428 0 373 326 182 24 chr2 31582328 31582911 -221673672 + L2 LINE L2 2185 2859 -455 2576 172 65 19 chr2 31583827 31584349 -221672234 + MER77 LTR ERV1 54 599 -6 181 293 147 0 chr2 31585270 31585345 -221671238 - L2 LINE L2 -10 3262 3177 288 286 44 30 chr2 31585465 31585620 -221670963 + MIR3 SINE MIR 7 146 -62 2239 180 19 90 chr2 31586535 31587169 -221669414 + L1MB5 LINE L1 5572 6160 -14 235 177 32 0 chr2 31587170 31587232 -221669351 + (CA)n Simple_repeat Simple_repeat 2 65 0 492 215 96 60 chr2 31587648 31587816 -221668767 + L1ME4a LINE L1 5851 6032 -89 4245 12 0 0 chr2 31587816 31588314 -221668269 + L1PA2 LINE L1 5658 6155 0 492 215 96 60 chr2 31588314 31588396 -221668187 + L1ME4a LINE L1 6032 6110 -11 2340 109 0 6 chr2 31588837 31589148 -221667435 - AluSc SINE Alu 0 309 1 720 151 0 0 chr2 31589891 31590010 -221666573 - AluSp/q SINE Alu -3 310 192 22 35 0 0 chr2 31590558 31590587 -221665996 + AT_rich Low_complexity Low_complexity 1 29 0 227 286 143 0 chr2 31590957 31591034 -221665549 + MIR SINE MIR 59 146 -116 23 0 0 0 chr2 31591871 31591894 -221664689 + AT_rich Low_complexity Low_complexity 1 23 0 971 101 0 20 chr2 31591895 31592044 -221664539 - L1MA2 LINE L1 -1 6303 6158 2121 138 7 0 chr2 31592047 31592344 -221664239 - AluSx SINE Alu -10 302 4 833 211 94 19 chr2 31592734 31592947 -221663636 - MIR SINE MIR -32 230 2 209 342 159 14 chr2 31594172 31594467 -221662116 + L2 LINE L2 2394 2731 -583 187 300 33 56 chr2 31594684 31594774 -221661809 + L2 LINE L2 3009 3096 -176 192 312 43 21 chr2 31594871 31594964 -221661619 + L2 LINE L2 3210 3304 -9 * 236 250 0 0 chr2 31594939 31594987 -221661596 - L2 LINE L2 -4 3309 3262 537 295 31 26 chr2 31595029 31595222 -221661361 + MIR SINE MIR 69 262 0 207 272 6 139 chr2 31596637 31596810 -221659773 + MIR SINE MIR 63 212 -50 305 254 18 79 chr2 31596909 31597023 -221659560 + MIR SINE MIR 30 136 -126 187 218 0 55 chr2 31597035 31597090 -221659493 + L2 LINE L2 3219 3270 -2 849 211 0 57 chr2 31597121 31597221 -221659362 + MER5A DNA MER1_type 7 92 -97 2207 112 0 35 chr2 31597221 31597533 -221659050 - AluSq SINE Alu -12 301 1 849 211 0 57 chr2 31597533 31597626 -221658957 + MER5A DNA MER1_type 92 189 0 739 263 69 5 chr2 31597690 31597907 -221658676 - MIR SINE MIR -24 238 8 357 214 20 31 chr2 31599230 31599328 -221657255 - MIR SINE MIR -146 116 20 456 274 82 0 chr2 31599353 31599488 -221657095 - MIR SINE MIR -14 248 103 292 298 50 16 chr2 31600715 31600836 -221655747 + MIR SINE MIR 20 144 -118 497 253 106 0 chr2 31601470 31601640 -221654943 + MIR SINE MIR 50 237 -25 406 373 39 14 chr2 31603441 31603720 -221652863 + L2 LINE L2 2926 3211 -61 2125 203 52 29 chr2 31603827 31604349 -221652234 + MLT1F LTR MaLR 1 534 -8 202 314 14 0 chr2 31605282 31605352 -221651231 + MIR SINE MIR 69 139 -69 257 269 92 64 chr2 31605489 31605630 -221650953 + MIR SINE MIR 92 236 -26 388 309 148 0 chr2 31605816 31605978 -221650605 + MIR SINE MIR 20 205 -57 269 297 101 29 chr2 31606418 31606556 -221650027 - MIR3 SINE MIR -56 152 5 441 259 192 5 chr2 31607984 31608177 -221648406 - MIR SINE MIR -6 256 28 188 304 249 28 chr2 31609713 31609930 -221646653 + L2 LINE L2 2442 2706 -608 462 330 99 54 chr2 31609988 31610431 -221646152 + L2 LINE L2 2809 3271 -1 1258 214 37 3 chr2 31610885 31611206 -221645377 + MER33 DNA MER1_type 1 324 0 345 100 0 0 chr2 31612132 31612182 -221644401 + (TG)n Simple_repeat Simple_repeat 1 50 0 202 354 281 0 chr2 31612353 31612531 -221644052 - MIR SINE MIR 0 262 35 2266 117 0 3 chr2 31612624 31612931 -221643652 - AluSx SINE Alu -6 306 1 222 338 158 0 chr2 31613936 31614075 -221642508 + MIR SINE MIR 92 252 -10 205 308 108 0 chr2 31614266 31614386 -221642197 - L2 LINE L2 -4 3268 3136 523 269 129 0 chr2 31615982 31616153 -221640430 - MIR SINE MIR -5 257 65 1657 119 70 0 chr2 31616340 31616584 -221639999 + AluSq SINE Alu 1 261 -52 287 282 0 24 chr2 31617319 31617404 -221639179 - MIR3 SINE MIR -22 186 104 1765 275 121 15 chr2 31617632 31618362 -221638221 + L1ME3A LINE L1 5359 6165 -5 366 80 0 0 chr2 31619319 31619369 -221637214 + (CA)n Simple_repeat Simple_repeat 2 51 0 288 365 9 0 chr2 31619438 31619545 -221637038 + MIR SINE MIR 28 135 -73 286 322 144 0 chr2 31620553 31620671 -221635912 + L2 LINE L2 3133 3267 -5 282 116 0 0 chr2 31620672 31620715 -221635868 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 462 88 0 0 chr2 31622136 31622204 -221634379 - MADE1 DNA Mariner -12 68 1 276 292 45 0 chr2 31622577 31622666 -221633917 - MIR3 SINE MIR -34 174 82 257 106 0 21 chr2 31623240 31623287 -221633296 + (TCC)n Simple_repeat Simple_repeat 3 48 0 903 177 5 91 chr2 31624247 31624445 -221632138 - MER5A DNA MER1_type -2 187 7 580 189 0 0 chr2 31624462 31624564 -221632019 + MER5A DNA MER1_type 4 105 -84 208 310 0 14 chr2 31624680 31624751 -221631832 - MER5B DNA MER1_type -102 76 7 343 289 0 22 chr2 31625104 31625194 -221631389 + L1MC4 LINE L1 6614 6701 -1341 200 158 18 0 chr2 31625198 31625255 -221631328 + (TA)n Simple_repeat Simple_repeat 2 59 0 646 262 34 48 chr2 31625258 31625464 -221631119 - MIR SINE MIR -58 204 2 888 177 52 10 chr2 31625604 31625796 -221630787 + MER20 DNA MER1_type 20 219 0 291 309 12 0 chr2 31627146 31627227 -221629356 - MIR3 SINE MIR -6 202 121 832 311 26 0 chr2 31628737 31628965 -221627618 - MIR SINE MIR -8 254 21 297 318 40 32 chr2 31629259 31629385 -221627198 - MIR3 SINE MIR -46 162 36 191 339 97 24 chr2 31630498 31630622 -221625961 - L2 LINE L2 -213 3059 2927 246 135 0 0 chr2 31630632 31630669 -221625914 - MLT2C2 LTR ERVL 0 464 428 423 0 0 0 chr2 31630671 31630718 -221625865 + (TG)n Simple_repeat Simple_repeat 2 48 0 1735 133 10 24 chr2 31630747 31631040 -221625543 + MER7A DNA MER2_type 14 300 -46 1829 153 17 24 chr2 31631040 31631334 -221625249 - AluJo SINE Alu -18 294 3 1216 183 256 38 chr2 31631361 31631755 -221624828 - MLT2B1 LTR ERVL -40 480 1 22 0 0 0 chr2 31632505 31632527 -221624056 + AT_rich Low_complexity Low_complexity 1 22 0 261 290 35 10 chr2 31632593 31632690 -221623893 - MIR SINE MIR -55 153 51 1671 106 166 15 chr2 31633231 31633562 -221623021 - L1MA7 LINE L1 0 6291 5911 550 149 116 0 chr2 31633544 31633665 -221622918 + L1MA7 LINE L1 5783 5917 -374 * 495 253 71 76 chr2 31634148 31634346 -221622237 - MIR SINE MIR -57 205 9 546 335 73 17 chr2 31634698 31634985 -221621598 - L3 LINE CR1 -53 1524 1222 190 279 0 0 chr2 31635234 31635277 -221621306 - MIR SINE MIR -2 260 218 1765 199 43 53 chr2 31635939 31635976 -221620607 - MLT2D LTR ERVL 0 414 378 351 0 0 0 chr2 31635976 31636015 -221620568 + (TG)n Simple_repeat Simple_repeat 2 40 0 1765 199 43 53 chr2 31636015 31636395 -221620188 - MLT2D LTR ERVL -36 378 1 418 209 55 27 chr2 31636452 31636562 -221620021 - MIR SINE MIR -74 188 76 596 253 58 67 chr2 31637040 31637352 -221619231 + L1MEd LINE L1 560 868 -5251 260 128 0 0 chr2 31637341 31637388 -221619195 + L1PB4 LINE L1 6108 6154 -2 * 311 303 50 76 chr2 31637546 31637687 -221618896 - MIR SINE MIR -50 212 76 2171 122 0 3 chr2 31637687 31637982 -221618601 + AluSx SINE Alu 1 294 -18 311 303 50 76 chr2 31637982 31638038 -221618545 - MIR SINE MIR -186 76 20 690 276 62 0 chr2 31641891 31642101 -221614482 - MIR SINE MIR -6 256 34 1740 162 3 40 chr2 31643641 31643937 -221612646 - AluJo SINE Alu -27 285 1 232 67 0 44 chr2 31644607 31644652 -221611931 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1341 288 105 65 chr2 31644809 31645522 -221611061 + L2 LINE L2 1942 2625 -689 2130 134 0 7 chr2 31645522 31645828 -221610755 - AluSx SINE Alu -8 304 1 1341 288 105 65 chr2 31645828 31645858 -221610725 + L2 LINE L2 2625 2652 -662 2260 79 11 0 chr2 31645858 31645987 -221610596 + AluY SINE Alu 1 127 -184 180 0 0 0 chr2 31645987 31646007 -221610576 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2260 79 11 0 chr2 31646007 31646157 -221610426 + AluY SINE Alu 127 283 -28 1341 288 105 65 chr2 31646157 31646402 -221610181 + L2 LINE L2 2652 2971 -343 337 262 76 69 chr2 31646604 31646838 -221609745 + MIR SINE MIR 16 248 -14 250 276 67 48 chr2 31646896 31647001 -221609582 + MIR SINE MIR 45 151 -57 218 183 0 141 chr2 31647733 31647804 -221608779 + L2 LINE L2 2757 2817 -497 203 263 17 17 chr2 31648265 31648383 -221608200 + A-rich Low_complexity Low_complexity 1 118 0 286 200 0 0 chr2 31648605 31648660 -221607923 + MIR SINE MIR 51 105 -103 1326 268 46 21 chr2 31648687 31649206 -221607377 + HAL1b LINE L1 86 617 -731 541 239 86 0 chr2 31649304 31649467 -221607116 + HAL1b LINE L1 625 801 -547 696 243 74 5 chr2 31649565 31649754 -221606829 + MIR SINE MIR 47 248 -14 551 203 62 23 chr2 31650177 31650305 -221606278 + MIR3 SINE MIR 39 171 -37 2326 110 0 7 chr2 31650548 31650857 -221605726 + AluSq SINE Alu 1 307 -6 1630 218 62 12 chr2 31651005 31651428 -221605155 + L1MC4a LINE L1 7141 7584 -224 1493 162 82 75 chr2 31651602 31651978 -221604605 - MLT1B LTR MaLR -11 379 1 459 240 320 23 chr2 31652058 31652408 -221604175 + LTR16A1 LTR ERVL 4 457 0 238 258 48 0 chr2 31652416 31652478 -221604105 + MIR SINE MIR 197 261 -1 249 271 201 22 chr2 31652479 31652670 -221603913 - MIR SINE MIR -25 237 4 22 0 0 0 chr2 31652974 31652996 -221603587 + AT_rich Low_complexity Low_complexity 1 22 0 1885 150 95 12 chr2 31653821 31654167 -221602416 - THE1C LTR MaLR 0 375 1 23 0 0 0 chr2 31654192 31654215 -221602368 + AT_rich Low_complexity Low_complexity 1 23 0 255 286 0 14 chr2 31654548 31654618 -221601965 - MIR SINE MIR -36 226 158 416 272 62 43 chr2 31655248 31655410 -221601173 + MIR SINE MIR 48 212 -50 886 198 5 77 chr2 31656797 31656832 -221599751 + MER58A DNA MER1_type 19 55 -2365 2329 118 0 3 chr2 31656832 31657146 -221599437 - AluSq SINE Alu 0 313 1 886 198 5 77 chr2 31657146 31657332 -221599251 + MER58A DNA MER1_type 55 224 0 351 328 12 57 chr2 31657336 31657514 -221599069 + MIR SINE MIR 16 187 -58 306 0 0 0 chr2 31658689 31658723 -221597860 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 2373 267 184 20 chr2 31658858 31660332 -221596251 + L2 LINE L2 1549 3268 -4 326 333 65 8 chr2 31660445 31660568 -221596015 + MIR3 SINE MIR 1 130 -78 526 313 101 10 chr2 31660664 31660862 -221595721 - MIR SINE MIR -40 222 7 1381 182 50 87 chr2 31661237 31661638 -221594945 - MLT2C1 LTR ERVL -11 386 1 423 273 129 0 chr2 31662177 31662316 -221594267 + MIR3 SINE MIR 50 206 -2 1998 136 51 0 chr2 31662690 31662985 -221593598 + AluSq SINE Alu 1 310 -3 288 0 0 0 chr2 31663427 31663459 -221593124 + (TG)n Simple_repeat Simple_repeat 1 32 0 352 321 66 29 chr2 31664630 31664767 -221591816 + MIR3 SINE MIR 17 158 -50 393 300 57 7 chr2 31669296 31669436 -221587147 + L2 LINE L2 2219 2365 -949 320 315 80 60 chr2 31669457 31669657 -221586926 - MIR SINE MIR -11 251 48 286 319 52 84 chr2 31669624 31669969 -221586614 + L2 LINE L2 2441 2774 -540 * 5613 236 78 40 chr2 31670072 31671033 -221585550 - L1M4c LINE L1 -2945 3699 2776 2777 102 37 5 chr2 31671033 31671094 -221585489 + L1PA13 LINE L1 5714 5772 -391 276 30 0 0 chr2 31671094 31671127 -221585456 + (TG)n Simple_repeat Simple_repeat 2 34 0 492 86 0 0 chr2 31671129 31671199 -221585384 + (CA)n Simple_repeat Simple_repeat 2 71 0 2777 102 37 5 chr2 31671199 31671565 -221585018 + L1PA13 LINE L1 5772 6158 -5 5613 236 78 40 chr2 31671565 31673606 -221582977 - L1M4c LINE L1 -3868 2776 815 180 0 0 0 chr2 31673606 31673626 -221582957 + (TA)n Simple_repeat Simple_repeat 2 21 0 2338 114 3 0 chr2 31673626 31673933 -221582650 - AluSx SINE Alu -3 309 2 5613 236 78 40 chr2 31673933 31674288 -221582295 - L1M4c LINE L1 -5829 815 475 2056 132 10 3 chr2 31674288 31674584 -221581999 - AluSx SINE Alu -14 298 1 5613 236 78 40 chr2 31674584 31674740 -221581843 - L1M4c LINE L1 -6169 475 14 343 208 198 0 chr2 31674897 31674998 -221581585 - MIR SINE MIR -68 194 74 207 252 61 102 chr2 31675057 31675204 -221581379 - L3b LINE CR1 -147 1436 1296 207 320 70 31 chr2 31676873 31677001 -221579582 - L2 LINE L2 -191 3081 2949 2230 246 47 39 chr2 31678103 31678948 -221577635 + L2 LINE L2 2376 3235 -78 324 338 149 7 chr2 31679231 31679379 -221577204 - L2 LINE L2 -1 3271 3103 1747 168 34 24 chr2 31680179 31680471 -221576112 + AluJb SINE Alu 4 298 -14 2219 112 7 0 chr2 31681007 31681303 -221575280 - AluSx SINE Alu -14 298 1 549 271 115 28 chr2 31681546 31681764 -221574819 - MIR SINE MIR 0 262 26 2399 79 0 10 chr2 31681765 31682068 -221574515 - AluSg SINE Alu -10 300 1 278 384 13 38 chr2 31682421 31682580 -221574003 - MIR SINE MIR -57 205 51 400 290 105 25 chr2 31683207 31683369 -221573214 + MER5A DNA MER1_type 1 175 -14 1016 257 16 0 chr2 31686057 31686314 -221570269 + L1MD3 LINE L1 7729 7989 -6 2550 158 36 11 chr2 31686761 31687211 -221569372 + MLT2C2 LTR ERVL 3 463 -1 496 233 151 0 chr2 31688291 31688450 -221568133 + MER53 DNA DNA 1 183 -6 440 215 62 31 chr2 31689544 31689674 -221566909 - L2 LINE L2 -1 3271 3138 384 296 262 4 chr2 31689847 31690114 -221566469 + L2 LINE L2 2978 3313 0 509 274 27 59 chr2 31691601 31691787 -221564796 - MER5A DNA MER1_type -3 186 7 894 222 90 15 chr2 31692113 31692379 -221564204 - Charlie4a DNA MER1_type 0 508 223 3037 110 16 9 chr2 31692380 31692833 -221563750 + L1PA16 LINE L1 5702 6157 -9 393 264 0 11 chr2 31692841 31692932 -221563651 + L1MC4 LINE L1 6614 6703 -1339 227 246 18 0 chr2 31692950 31693007 -221563576 + (TA)n Simple_repeat Simple_repeat 1 58 0 727 254 142 44 chr2 31693273 31693746 -221562837 + LTR33 LTR ERVL 3 521 0 378 297 39 39 chr2 31693751 31693906 -221562677 + MIR SINE MIR 74 228 -34 780 145 90 7 chr2 31694954 31695099 -221561484 + MLT1A1 LTR MaLR 3 159 -206 1113 150 6 0 chr2 31695099 31695266 -221561317 + FRAM SINE Alu 1 167 -9 1075 187 57 0 chr2 31695270 31695479 -221561104 + MLT1A1 LTR MaLR 145 365 0 233 373 55 8 chr2 31695597 31695762 -221560821 - MIR SINE MIR -71 137 17 297 314 112 61 chr2 31696666 31697321 -221559262 + L2 LINE L2 2288 2975 -339 7293 97 6 1 chr2 31697591 31699416 -221557167 - L1PA8 LINE L1 -5 6167 4336 21 0 0 0 chr2 31700715 31700736 -221555847 + AT_rich Low_complexity Low_complexity 1 21 0 374 288 73 57 chr2 31700868 31701045 -221555538 + MIR SINE MIR 49 228 -34 215 200 29 100 chr2 31701327 31701397 -221555186 + MIR3 SINE MIR 4 68 -140 376 292 69 15 chr2 31701469 31701599 -221554984 + MIR SINE MIR 1 137 -125 22 0 0 0 chr2 31701945 31701967 -221554616 + GC_rich Low_complexity Low_complexity 1 22 0 333 291 201 8 chr2 31703277 31703411 -221553172 - MIR SINE MIR -64 198 39 2102 121 0 63 chr2 31703745 31704076 -221552507 + AluSx SINE Alu 1 310 -2 2204 172 24 26 chr2 31704272 31704725 -221551858 + L1MB8 LINE L1 5727 6178 0 689 293 13 46 chr2 31704918 31705157 -221551426 - MIR SINE MIR -16 246 16 1983 115 3 23 chr2 31706492 31706797 -221549786 + L1PB1 LINE L1 5851 6149 -2 624 219 129 0 chr2 31707325 31707480 -221549103 - MER45A DNA AcHobo 0 178 4 495 48 0 0 chr2 31707804 31707866 -221548717 + (CA)n Simple_repeat Simple_repeat 1 62 0 310 345 7 14 chr2 31707896 31708041 -221548542 + CT-rich Low_complexity Low_complexity 1 144 0 234 301 14 14 chr2 31708131 31708204 -221548379 - L3 LINE CR1 -21 1556 1484 616 298 53 22 chr2 31708586 31708834 -221547749 + MIR SINE MIR 2 258 -4 684 293 236 11 chr2 31708851 31709426 -221547157 - L2 LINE L2 -13 3300 2589 358 267 147 0 chr2 31709746 31709862 -221546721 + MIR SINE MIR 20 152 -110 1159 211 120 88 chr2 31709959 31710424 -221546159 - MLT1H LTR MaLR -48 501 22 2610 142 26 21 chr2 31710484 31710908 -221545675 + MSTB LTR MaLR 1 426 0 301 297 119 0 chr2 31711454 31711555 -221545028 + L2 LINE L2 3160 3272 0 227 261 92 42 chr2 31711605 31711724 -221544859 + L3 LINE CR1 1148 1272 -305 394 283 58 29 chr2 31711776 31711949 -221544634 - MIR SINE MIR -77 185 8 186 43 0 0 chr2 31712148 31712171 -221544412 + (TA)n Simple_repeat Simple_repeat 2 24 0 378 301 89 0 chr2 31712297 31712420 -221544163 + MER94 DNA DNA 1 134 0 375 230 88 47 chr2 31712626 31712774 -221543809 - MIR SINE MIR -37 225 72 2538 163 20 13 chr2 31714813 31715267 -221541316 + LTR32 LTR ERVL 15 471 0 668 181 99 0 chr2 31715802 31715973 -221540610 - MER53 DNA DNA -1 188 1 257 235 163 51 chr2 31716149 31716247 -221540336 + MIR3 SINE MIR 5 113 -95 2412 110 0 0 chr2 31718278 31718587 -221537996 + AluSc SINE Alu 1 309 0 350 274 29 0 chr2 31718623 31718725 -221537858 + MER81 DNA DNA 1 105 -9 230 250 36 18 chr2 31719574 31719630 -221536953 + MIR SINE MIR 19 75 -133 228 159 246 14 chr2 31719708 31719777 -221536806 - MIR SINE MIR -71 191 107 380 251 126 60 chr2 31720165 31720282 -221536301 + MIR SINE MIR 65 198 -64 2286 104 0 10 chr2 31720282 31720580 -221536003 + AluSx SINE Alu 1 295 -17 380 251 126 60 chr2 31720580 31720629 -221535954 + MIR SINE MIR 198 242 -20 2376 116 14 11 chr2 31721315 31721678 -221534905 - THE1B LTR MaLR 0 364 1 295 243 0 3 chr2 31721996 31722065 -221534518 + MIR SINE MIR 84 140 -68 207 359 31 0 chr2 31722355 31722419 -221534164 + L3b LINE CR1 1508 1573 -10 * 543 266 77 73 chr2 31722418 31722745 -221533838 - L2 LINE L2 -79 3234 2907 506 267 72 113 chr2 31722767 31723310 -221533273 - L2 LINE L2 -905 2409 1900 2203 169 3 14 chr2 31723310 31723677 -221532906 + MLT1A1 LTR MaLR 1 363 -2 506 267 72 113 chr2 31723677 31723840 -221532743 - L2 LINE L2 -1414 1900 1732 236 188 59 79 chr2 31724103 31724204 -221532379 + MLT1E LTR MaLR 477 575 -18 513 316 56 32 chr2 31724233 31724609 -221531974 - L2 LINE L2 -1580 1734 1350 2238 98 34 0 chr2 31726022 31726318 -221530265 - AluSq SINE Alu -3 310 5 226 308 77 0 chr2 31726334 31726425 -221530158 + MIR SINE MIR 94 191 -71 1837 197 21 3 chr2 31726675 31727010 -221529573 + MER58B DNA MER1_type 1 341 0 1250 199 9 5 chr2 31727091 31727307 -221529276 - MLT1A1 LTR MaLR 0 365 149 2003 152 38 34 chr2 31727307 31727805 -221528778 + MLT2A2 LTR ERVL 1 514 -40 180 0 0 0 chr2 31727805 31727825 -221528758 + (TA)n Simple_repeat Simple_repeat 2 21 0 2003 152 38 34 chr2 31727825 31727867 -221528716 + MLT2A2 LTR ERVL 514 554 0 788 180 27 0 chr2 31727867 31728016 -221528567 - MLT1A1 LTR MaLR -212 153 1 387 301 260 0 chr2 31728114 31728287 -221528296 + L3 LINE CR1 1247 1464 -113 643 75 0 0 chr2 31728371 31728451 -221528132 + MADE1 DNA Mariner 1 80 0 1500 139 104 126 chr2 31729535 31729995 -221526588 + LTR7 LTR ERV1 1 450 0 251 280 68 15 chr2 31730329 31730461 -221526122 + MIR3 SINE MIR 20 158 -50 235 238 88 25 chr2 31731290 31731370 -221525213 + MIR SINE MIR 75 159 -103 2141 181 47 66 chr2 31731370 31731885 -221524698 - MLT1D LTR MaLR 0 505 1 210 309 106 21 chr2 31731923 31732017 -221524566 + MIR3 SINE MIR 71 172 -36 197 83 28 0 chr2 31732333 31732369 -221524214 + (CCA)n Simple_repeat Simple_repeat 1 37 0 331 265 141 16 chr2 31732947 31733132 -221523451 - L2 LINE L2 0 3313 3106 343 268 117 50 chr2 31733364 31733543 -221523040 + MIR3 SINE MIR 14 204 -4 2428 145 23 51 chr2 31734160 31734594 -221521989 - Tigger2a DNA MER2_type 0 434 13 717 312 112 27 chr2 31734685 31735694 -221520889 - L1MC/D LINE L1 -743 5403 4309 1193 187 35 0 chr2 31735694 31735897 -221520686 + MER6B DNA MER2_type 1 210 0 717 312 112 27 chr2 31735897 31736211 -221520372 - L1MC/D LINE L1 -1837 4309 4023 2227 160 14 0 chr2 31736269 31736625 -221519958 - MER47A DNA MER2_type 0 366 6 433 280 173 11 chr2 31736672 31736943 -221519640 - L1P LINE L1 -2192 3954 3640 311 292 119 57 chr2 31736979 31737282 -221519301 - L1MC/D LINE L1 -2616 3530 3247 2684 98 21 24 chr2 31737282 31737658 -221518925 + THE1C LTR MaLR 1 375 0 311 292 119 57 chr2 31737658 31738657 -221517926 - L1MC/D LINE L1 -2899 3247 2147 1294 260 115 37 chr2 31739168 31739714 -221516869 - HAL1b LINE L1 -415 933 345 4082 259 105 39 chr2 31739755 31741006 -221515577 - L1MC4 LINE L1 -2 8040 6674 2093 125 3 0 chr2 31741006 31741293 -221515290 + AluSx SINE Alu 23 310 -2 4082 259 105 39 chr2 31741293 31741523 -221515060 - L1MC4 LINE L1 -1368 6674 6461 253 262 131 0 chr2 31741818 31741940 -221514643 - HAL1b LINE L1 -1125 223 86 500 240 175 7 chr2 31742476 31742630 -221513953 + L1ME3A LINE L1 5988 6167 -3 314 339 78 17 chr2 31744407 31744587 -221511996 + MIR3 SINE MIR 11 201 -7 210 324 124 49 chr2 31746128 31746313 -221510270 - L3 LINE CR1 -1157 420 222 211 373 0 0 chr2 31746893 31746952 -221509631 + L2 LINE L2 3206 3264 -8 4234 99 45 2 chr2 31749198 31749754 -221506829 + LTR19B LTR ERV1 1 580 0 274 281 117 61 chr2 31750085 31750495 -221506088 + HAL1 LINE L1 1109 1541 -966 1889 149 0 19 chr2 31750505 31750813 -221505770 + AluJo SINE Alu 1 302 -10 1203 171 151 16 chr2 31751316 31751568 -221505015 + AluJo SINE Alu 2 287 -25 345 294 131 35 chr2 31751688 31752055 -221504528 + L1MEc LINE L1 2073 2474 -3922 351 337 71 51 chr2 31752097 31752303 -221504280 + L1MEc LINE L1 2538 2738 -3477 2107 110 27 7 chr2 31752303 31752603 -221503980 + AluSp SINE Alu 1 306 -7 351 337 71 51 chr2 31752603 31752971 -221503612 + L1MEc LINE L1 2738 3119 -3096 412 324 134 3 chr2 31752990 31753280 -221503303 + L1MEc LINE L1 3207 3534 -2681 524 249 137 46 chr2 31753369 31753654 -221502929 - MLT1J1 LTR MaLR -120 326 16 328 296 128 14 chr2 31753715 31754060 -221502523 + L1MEc LINE L1 3595 3978 -2237 300 328 127 32 chr2 31754076 31754384 -221502199 + L1MEc LINE L1 4016 4352 -1863 1108 290 84 46 chr2 31754393 31755415 -221501168 + L1MEc LINE L1 4836 5399 -816 2846 7 0 0 chr2 31755415 31755720 -221500863 + AluY SINE Alu 1 305 -6 1108 290 84 46 chr2 31755720 31755796 -221500787 + L1MEc LINE L1 5399 5471 -744 2199 107 3 0 chr2 31756106 31756396 -221500187 - AluSx SINE Alu -21 291 1 409 244 199 6 chr2 31758044 31758200 -221498383 - MER5A DNA MER1_type 0 189 4 1246 177 38 56 chr2 31758316 31758440 -221498143 - MER58B DNA MER1_type -2113 307 182 2472 66 0 3 chr2 31758440 31758742 -221497841 + AluY SINE Alu 1 301 -10 1246 177 38 56 chr2 31758742 31758883 -221497700 - MER58B DNA MER1_type -2238 182 47 213 294 81 23 chr2 31759989 31760086 -221496497 + MIR SINE MIR 50 150 -61 628 137 0 0 chr2 31760152 31760247 -221496336 - AluSg/x SINE Alu -3 309 215 228 276 17 0 chr2 31760326 31760384 -221496199 + MIR SINE MIR 156 214 -48 333 317 83 46 chr2 31761881 31762121 -221494462 + MIR SINE MIR 8 256 -6 949 203 102 4 chr2 31762584 31762820 -221493763 - L1ME3A LINE L1 0 6170 5912 1385 194 52 26 chr2 31762821 31763130 -221493453 + MER58B DNA MER1_type 17 333 -8 533 205 25 16 chr2 31763159 31763281 -221493302 - L1ME3A LINE L1 -497 5673 5551 23 33 0 0 chr2 31764492 31764522 -221492061 + AT_rich Low_complexity Low_complexity 1 30 0 341 312 16 32 chr2 31764722 31764847 -221491736 + MIR SINE MIR 70 192 -70 582 118 0 0 chr2 31766275 31766368 -221490215 + (TG)n Simple_repeat Simple_repeat 2 94 0 189 0 0 0 chr2 31767827 31767848 -221488735 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 3822 142 36 69 chr2 31768111 31768825 -221487758 + LTR8 LTR ERV1 1 691 0 302 215 103 37 chr2 31770541 31770680 -221485903 + MIR SINE MIR 18 166 -57 5825 68 12 0 chr2 31770960 31771698 -221484885 + L1PA6 LINE L1 5332 6078 -76 2052 299 41 29 chr2 31771843 31772323 -221484260 - L1MEc LINE L1 -5355 1041 568 2039 139 0 0 chr2 31772323 31772610 -221483973 + AluSx SINE Alu 1 287 -25 2052 299 41 29 chr2 31772610 31773122 -221483461 - L1MEc LINE L1 -5828 568 37 572 299 92 0 chr2 31773149 31773333 -221483250 + MIR SINE MIR 52 252 -10 22 0 0 0 chr2 31774051 31774073 -221482510 + AT_rich Low_complexity Low_complexity 1 22 0 411 350 13 6 chr2 31774276 31774433 -221482150 + MER5A DNA MER1_type 32 189 0 195 318 68 0 chr2 31774889 31774977 -221481606 + L2 LINE L2 3169 3262 -10 367 305 201 29 chr2 31775344 31775718 -221480865 + L2 LINE L2 2826 3263 -9 692 135 8 45 chr2 31776187 31776320 -221480263 + MER39B LTR ERV1 526 653 0 261 151 0 0 chr2 31777417 31777470 -221479113 + (CCG)n Simple_repeat Simple_repeat 1 53 0 666 205 23 29 chr2 31778209 31778380 -221478203 + MER58B DNA MER1_type 172 341 0 190 254 91 0 chr2 31779710 31779765 -221476818 - MIR3 SINE MIR -8 200 141 184 125 107 54 chr2 31780421 31780477 -221476106 + L2 LINE L2 2995 3053 -260 186 43 0 0 chr2 31780703 31780726 -221475857 + (A)n Simple_repeat Simple_repeat 1 23 0 816 213 53 32 chr2 31780727 31780998 -221475585 + L1MB7 LINE L1 5573 5854 -330 1861 201 76 18 chr2 31781432 31781897 -221474686 - MLT1D LTR MaLR 0 505 1 228 294 59 12 chr2 31781899 31781984 -221474599 - MIR SINE MIR -84 178 90 519 317 140 28 chr2 31782030 31782424 -221474159 - L2 LINE L2 -16 3297 2860 500 281 92 50 chr2 31782422 31782660 -221473923 + L2 LINE L2 3022 3269 -3 * 344 283 40 0 chr2 31783878 31783977 -221472606 + MIR SINE MIR 30 132 -76 443 275 93 3 chr2 31783988 31784155 -221472428 + MIR SINE MIR 39 217 -45 638 249 124 85 chr2 31784446 31784961 -221471622 + LTR67 LTR ERVL 2 536 -21 2297 79 0 0 chr2 31784968 31785258 -221471325 - AluSg SINE Alu -20 290 1 264 200 0 0 chr2 31785289 31785339 -221471244 + MIR SINE MIR 96 145 -117 245 295 0 0 chr2 31785769 31785830 -221470753 + L2 LINE L2 3245 3305 -8 830 253 45 9 chr2 31785980 31786201 -221470382 - MIR SINE MIR 0 262 34 252 304 134 0 chr2 31787165 31787277 -221469306 + MIR3 SINE MIR 77 203 -5 1653 108 0 24 chr2 31787969 31788218 -221468365 + AluSg SINE Alu 1 243 -67 362 286 40 32 chr2 31789828 31789954 -221466629 + MIR SINE MIR 20 146 -116 23 0 0 0 chr2 31790152 31790175 -221466408 + GC_rich Low_complexity Low_complexity 1 23 0 1094 148 69 5 chr2 31792183 31792214 -221464369 + AluJo SINE Alu 87 115 -197 180 0 0 0 chr2 31792214 31792234 -221464349 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1094 148 69 5 chr2 31792234 31792404 -221464179 + AluJo SINE Alu 115 301 -11 2180 94 3 7 chr2 31794145 31794453 -221462130 + AluSq SINE Alu 7 313 0 491 259 15 0 chr2 31794844 31794975 -221461608 - MER94 DNA DNA -1 133 1 278 210 0 32 chr2 31795366 31795428 -221461155 - Charlie8 DNA MER1_type -1001 1416 1357 458 292 55 64 chr2 31795530 31795749 -221460834 - Charlie8 DNA MER1_type -2199 218 2 305 305 39 39 chr2 31796060 31796188 -221460395 - MIR3 SINE MIR -28 180 53 254 271 0 0 chr2 31797846 31797916 -221458667 + (TA)n Simple_repeat Simple_repeat 2 71 0 193 341 12 12 chr2 31798144 31798226 -221458357 + MER5B DNA MER1_type 1 82 -96 245 269 36 104 chr2 31798658 31798937 -221457646 - L1MC4 LINE L1 -2 8040 7781 355 335 41 41 chr2 31799332 31799526 -221457057 + MIR3 SINE MIR 10 203 -5 21 0 0 0 chr2 31800128 31800149 -221456434 + AT_rich Low_complexity Low_complexity 1 21 0 843 252 172 17 chr2 31800744 31801046 -221455537 + L2 LINE L2 2965 3313 0 258 32 0 0 chr2 31801046 31801077 -221455506 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 180 97 0 0 chr2 31801120 31801151 -221455432 + (A)n Simple_repeat Simple_repeat 1 31 0 2366 87 0 0 chr2 31803328 31803637 -221452946 - AluSp SINE Alu -4 309 1 391 262 40 24 chr2 31804278 31804404 -221452179 - L2 LINE L2 0 3313 3186 336 315 93 82 chr2 31804572 31804955 -221451628 - L2 LINE L2 -261 3052 2675 2324 68 3 0 chr2 31804955 31805249 -221451334 - AluY SINE Alu -16 295 1 336 315 93 82 chr2 31805249 31805419 -221451164 - L2 LINE L2 -638 2675 2508 243 284 39 63 chr2 31805528 31805655 -221450928 - L2 LINE L2 -222 3050 2927 400 356 17 17 chr2 31805900 31806077 -221450506 + MER5A DNA MER1_type 8 184 -5 1506 203 0 7 chr2 31806179 31806508 -221450075 - AluJo SINE Alu 0 327 1 238 301 41 0 chr2 31806517 31806590 -221449993 - MIR SINE MIR -108 154 79 275 303 0 87 chr2 31809260 31809373 -221447210 - MER5A DNA MER1_type -5 184 72 243 353 33 1 chr2 31811445 31811540 -221445043 + MIR SINE MIR 17 110 -102 993 199 44 36 chr2 31811540 31811877 -221444706 + Charlie1a DNA MER1_type 2 379 -1076 968 217 107 75 chr2 31811880 31812254 -221444329 + LTR41 LTR ERVL 377 762 -11 357 271 15 5 chr2 31813407 31813510 -221443073 - MIR SINE MIR -64 144 42 337 316 41 35 chr2 31814740 31814911 -221441672 - MIR SINE MIR -56 206 35 423 68 0 0 chr2 31815049 31815108 -221441475 + (CA)n Simple_repeat Simple_repeat 2 60 0 273 290 76 130 chr2 31819340 31819602 -221436981 + L2 LINE L2 2978 3225 -47 300 299 31 24 chr2 31820300 31820427 -221436156 - MIR SINE MIR -119 143 16 299 143 0 14 chr2 31820666 31820736 -221435847 + (TC)n Simple_repeat Simple_repeat 2 70 0 228 86 0 0 chr2 31821937 31821972 -221434611 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 295 240 223 23 chr2 31822176 31822351 -221434232 - MIR SINE MIR -6 256 47 261 258 22 45 chr2 31824211 31824300 -221432283 + MIR SINE MIR 65 151 -111 195 344 100 11 chr2 31824762 31824852 -221431731 + L2 LINE L2 3124 3221 -51 415 337 84 20 chr2 31825307 31825503 -221431080 - MIR SINE MIR -49 213 5 407 307 134 39 chr2 31825738 31826044 -221430539 + L2 LINE L2 2935 3269 -3 279 237 301 0 chr2 31826741 31826834 -221429749 - MIR SINE MIR -71 191 71 1080 173 112 9 chr2 31828408 31828622 -221427961 - MER46A DNA MER2_type 0 236 1 192 346 10 40 chr2 31829264 31829365 -221427218 + MIR SINE MIR 2 99 -163 653 273 35 10 chr2 31830187 31830385 -221426198 - MIR3 SINE MIR -3 205 3 313 269 64 43 chr2 31830962 31831103 -221425480 + MLT1H LTR MaLR 125 268 -281 232 208 0 21 chr2 31831289 31831337 -221425246 + L2 LINE L2 3212 3258 -14 248 75 0 25 chr2 31831337 31831377 -221425206 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 213 246 215 0 chr2 31832393 31832458 -221424125 + MIR SINE MIR 114 192 -70 213 341 23 85 chr2 31833061 31833319 -221423264 - L2 LINE L2 -451 2863 2622 186 250 17 17 chr2 31833750 31833810 -221422773 + MIR SINE MIR 86 145 -117 181 340 21 32 chr2 31833830 31833924 -221422659 - L3b LINE CR1 -278 1305 1213 641 355 9 4 chr2 31833960 31834191 -221422392 - MIR SINE MIR -16 246 15 251 275 38 25 chr2 31834572 31834652 -221421931 - L3 LINE CR1 -1 1576 1496 947 67 20 13 chr2 31834658 31834808 -221421775 + (TTTC)n Simple_repeat Simple_repeat 2 152 0 5131 30 0 3 chr2 31834810 31835405 -221421178 - L1PA3 LINE L1 0 6155 5563 12581 30 0 0 chr2 31835405 31837046 -221419537 + L1PA3 LINE L1 3920 5560 -595 312 222 0 0 chr2 31837047 31837119 -221419464 + CT-rich Low_complexity Low_complexity 1 72 0 474 216 123 53 chr2 31837847 31838018 -221418565 + MIR SINE MIR 80 262 0 481 209 24 46 chr2 31838405 31838536 -221418047 + MIR SINE MIR 18 161 -62 1266 195 105 76 chr2 31838542 31838989 -221417594 + MLT1C LTR MaLR 6 465 -2 723 91 0 10 chr2 31838994 31839093 -221417490 + MER4A LTR ERV1 1 98 -566 1995 111 11 25 chr2 31839093 31839443 -221417140 + MER4A LTR ERV1 261 664 0 373 257 30 0 chr2 31839443 31839544 -221417039 + MIR SINE MIR 157 260 -2 2128 112 0 3 chr2 31840963 31841267 -221415316 - AluSq SINE Alu -10 303 1 1452 192 46 23 chr2 31841629 31842020 -221414563 - MER54B LTR ERVL -5 788 487 303 191 16 0 chr2 31842032 31842095 -221414488 + MER4-int LTR ERV1 1099 1162 -5436 654 178 0 0 chr2 31842103 31842232 -221414351 + (TG)n Simple_repeat Simple_repeat 1 129 0 209 337 67 0 chr2 31843514 31843603 -221412980 + MIR SINE MIR 53 147 -115 4715 180 31 15 chr2 31845258 31846106 -221410477 + MER21B LTR ERV1 1 861 -2 1079 99 0 0 chr2 31846984 31847135 -221409448 - AluSg/x SINE Alu -1 311 161 624 192 11 73 chr2 31847175 31847352 -221409231 + GSAT Satellite centromeric 3 168 -49 1226 92 0 12 chr2 31847353 31847517 -221409066 - AluSq SINE Alu -151 162 1 227 229 71 29 chr2 31847601 31847671 -221408912 + MLT1L LTR MaLR 1 73 -542 351 263 144 8 chr2 31847810 31847928 -221408655 - L2 LINE L2 -1 3271 3138 695 242 119 45 chr2 31848308 31848448 -221408135 - MER5C DNA MER1_type -2 322 194 1613 176 10 3 chr2 31848448 31848737 -221407846 + AluJb SINE Alu 1 291 -21 695 242 119 45 chr2 31848737 31848865 -221407718 - MER5C DNA MER1_type -130 194 34 994 171 18 0 chr2 31849938 31850108 -221406475 - AluJo SINE Alu -20 292 120 641 232 11 76 chr2 31850540 31850725 -221405858 - MER63A DNA MER1_type -37 173 1 2239 55 0 17 chr2 31850954 31851284 -221405299 + AluY SINE Alu 1 325 0 332 230 0 23 chr2 31851406 31851493 -221405090 - L1ME4a LINE L1 -53 6068 5984 365 304 106 64 chr2 31851506 31851818 -221404765 - L1MC4a LINE L1 -1859 5949 5625 * 568 338 48 13 chr2 31851794 31852022 -221404561 + L1ME4a LINE L1 3962 4197 -1949 454 344 28 36 chr2 31852046 31852293 -221404290 + L1ME4a LINE L1 4153 4397 -1749 396 313 183 9 chr2 31852376 31852464 -221404119 + L1ME4a LINE L1 5852 5923 -198 261 0 0 0 chr2 31852464 31852493 -221404090 + (CA)n Simple_repeat Simple_repeat 1 29 0 396 313 183 9 chr2 31852493 31852634 -221403949 + L1ME4a LINE L1 5923 6121 0 595 195 76 100 chr2 31852662 31852828 -221403755 + L1ME1 LINE L1 5955 6117 -49 1952 130 33 0 chr2 31852828 31853129 -221403454 + AluSx SINE Alu 1 311 -1 595 195 76 100 chr2 31853129 31853172 -221403411 + L1ME1 LINE L1 6117 6159 -7 308 188 58 29 chr2 31853489 31853558 -221403025 - L2 LINE L2 -1 3271 3201 251 270 32 0 chr2 31854266 31854329 -221402254 - MIR SINE MIR -108 154 90 3652 149 220 7 chr2 31854514 31855227 -221401356 - L1M1 LINE L1 -5287 2278 1414 1750 99 4 0 chr2 31855227 31855460 -221401123 - AluSc SINE Alu -75 234 1 764 70 130 17 chr2 31855461 31855576 -221401007 - AluSg SINE Alu -181 129 2 306 314 24 10 chr2 31856636 31856774 -221399809 + L1ME LINE L1 5296 5433 -688 27 0 0 0 chr2 31856852 31856879 -221399704 + AT_rich Low_complexity Low_complexity 1 27 0 204 194 28 0 chr2 31857074 31857110 -221399473 - L2 LINE L2 -18 3254 3218 185 148 0 0 chr2 31857137 31857164 -221399419 - MIR SINE MIR -154 108 82 2080 130 0 3 chr2 31857246 31857553 -221399030 + AluSx SINE Alu 1 306 -6 2217 184 154 28 chr2 31857555 31858100 -221398483 + MER90 LTR ERV1 1 614 0 751 164 9 0 chr2 31858425 31858541 -221398042 + FLAM_C SINE Alu 2 118 -25 811 174 0 0 chr2 31858720 31858852 -221397731 + AluSq/x SINE Alu 1 132 -180 4918 139 46 27 chr2 31859421 31859710 -221396873 + MER4D LTR ERV1 2 284 -619 2304 81 0 3 chr2 31859710 31860019 -221396564 + AluY SINE Alu 1 308 -3 4918 139 46 27 chr2 31860019 31860613 -221395970 + MER4D LTR ERV1 284 902 -1 928 230 0 5 chr2 31861205 31861409 -221395174 + AluJo SINE Alu 84 286 -26 2129 110 0 7 chr2 31861685 31861984 -221394599 + AluSx SINE Alu 1 297 -15 2262 81 0 10 chr2 31862194 31862501 -221394082 + AluY SINE Alu 1 304 -7 1951 136 0 10 chr2 31862817 31863125 -221393458 - AluSx SINE Alu -7 305 1 1059 116 12 6 chr2 31863144 31863308 -221393275 - AluSq SINE Alu -15 298 134 2135 107 0 7 chr2 31863429 31863727 -221392856 + AluSx SINE Alu 1 296 -16 2578 45 0 0 chr2 31863776 31864086 -221392497 + AluY SINE Alu 2 311 0 254 188 0 0 chr2 31864244 31864292 -221392291 + FLAM_A SINE Alu 84 131 -2 526 171 29 48 chr2 31864292 31864397 -221392186 + AluJo/FRAM SINE Alu 189 291 -21 24 32 0 0 chr2 31864397 31864428 -221392155 + AT_rich Low_complexity Low_complexity 1 31 0 2170 112 0 0 chr2 31864691 31864995 -221391588 + AluSx SINE Alu 1 304 -8 1902 137 10 13 chr2 31865049 31865362 -221391221 - AluJo SINE Alu 0 312 1 2057 89 4 0 chr2 31865375 31865656 -221390927 - AluSg SINE Alu -20 290 9 808 173 0 23 chr2 31865667 31865800 -221390783 - FLAM_C SINE Alu -3 130 1 2106 103 7 3 chr2 31866010 31866312 -221390271 - AluSg SINE Alu -7 303 1 202 252 87 68 chr2 31866465 31866568 -221390015 + L2 LINE L2 3192 3296 -17 1504 272 53 30 chr2 31866601 31867135 -221389448 - MLT1H LTR MaLR 0 593 1 1977 127 0 13 chr2 31867253 31867553 -221389030 + AluSx SINE Alu 1 296 -16 1474 174 3 48 chr2 31867720 31868014 -221388569 - AluJb SINE Alu -31 281 1 635 186 110 0 chr2 31868657 31868775 -221387808 + FLAM_A SINE Alu 3 133 0 26 30 0 0 chr2 31869168 31869201 -221387382 + AT_rich Low_complexity Low_complexity 1 33 0 554 198 11 126 chr2 31869615 31869693 -221386890 - Charlie8 DNA MER1_type -65 265 218 1760 164 7 3 chr2 31869693 31869991 -221386592 - AluJb SINE Alu -13 299 1 554 198 11 126 chr2 31869991 31870094 -221386489 - Charlie8 DNA MER1_type -112 218 105 672 191 0 0 chr2 31870124 31870250 -221386333 - FRAM SINE Alu -10 166 41 1793 138 0 40 chr2 31870266 31870460 -221386123 - AluSx SINE Alu 0 319 141 2215 103 0 0 chr2 31870460 31870770 -221385813 - AluSq SINE Alu -3 310 1 1793 138 0 40 chr2 31870770 31870906 -221385677 - AluSx SINE Alu -178 141 1 902 196 0 6 chr2 31870914 31871119 -221385464 + AluSg/x SINE Alu 120 323 0 23 78 0 0 chr2 31871361 31871412 -221385171 + AT_rich Low_complexity Low_complexity 1 51 0 2344 73 3 0 chr2 31871444 31871744 -221384839 + AluSp SINE Alu 1 301 -12 978 78 0 0 chr2 31872038 31872166 -221384417 + AluSc SINE Alu 168 295 -14 1500 180 0 48 chr2 31872169 31872464 -221384119 - AluJb SINE Alu -31 281 1 185 133 33 0 chr2 31872567 31872597 -221383986 + L2 LINE L2 3191 3221 -92 1836 182 132 25 chr2 31872627 31872699 -221383884 - MER68 LTR ERV1 -2 560 497 1556 128 0 0 chr2 31872699 31872925 -221383658 - AluSg/x SINE Alu -16 296 71 1836 182 132 25 chr2 31872925 31873253 -221383330 - MER68 LTR ERV1 -65 497 117 1612 172 0 0 chr2 31873259 31873571 -221383012 + AluJb SINE Alu 1 312 0 1809 101 4 8 chr2 31873620 31873878 -221382705 - AluSg SINE Alu -25 285 29 1088 54 0 0 chr2 31873898 31874028 -221382555 + AluYb8 SINE Alu 1 130 -188 277 195 0 0 chr2 31874130 31874171 -221382412 - AluSg SINE Alu -261 41 1 348 269 83 58 chr2 31874235 31874267 -221382316 + MIR3 SINE MIR 34 64 -144 2106 108 0 3 chr2 31874267 31874563 -221382020 - AluSx SINE Alu -17 295 1 348 269 83 58 chr2 31874563 31874686 -221381897 + MIR3 SINE MIR 64 193 -15 270 0 0 0 chr2 31874686 31874716 -221381867 + (TG)n Simple_repeat Simple_repeat 1 30 0 2270 50 4 0 chr2 31874716 31874995 -221381588 - AluY SINE Alu -31 280 1 694 134 0 0 chr2 31875238 31875335 -221381248 + AluSq SINE Alu 2 98 -215 1498 133 5 0 chr2 31875455 31875673 -221380910 + AluSq SINE Alu 94 312 -1 528 255 80 14 chr2 31877074 31877286 -221379297 - HAL1b LINE L1 -750 598 373 4511 149 41 37 chr2 31877321 31878831 -221377752 - L1PA16 LINE L1 -104 6062 4544 1690 226 0 41 chr2 31878831 31879112 -221377471 + L1 LINE L1 4136 4394 -1752 2409 82 0 16 chr2 31879112 31879429 -221377154 + AluSx SINE Alu 1 312 0 1690 226 0 41 chr2 31879429 31879584 -221376999 + L1 LINE L1 4394 4554 -1592 1600 137 29 4 chr2 31879960 31880201 -221376382 + AluSx SINE Alu 54 300 -12 617 157 74 25 chr2 31880208 31880329 -221376254 + AluJb SINE Alu 2 128 -184 42 0 0 0 chr2 31880335 31880377 -221376206 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 31880510 31880533 -221376050 + AT_rich Low_complexity Low_complexity 1 23 0 259 150 0 0 chr2 31881557 31881597 -221374986 - L1M4 LINE L1 -1584 4562 4523 * 1873 234 50 27 chr2 31881594 31881973 -221374610 + L1ME1 LINE L1 5551 5951 -215 2041 93 62 7 chr2 31881973 31882262 -221374321 - AluSc SINE Alu -4 305 1 1873 234 50 27 chr2 31882262 31882480 -221374103 + L1ME1 LINE L1 5951 6162 -4 1962 146 7 10 chr2 31882552 31882853 -221373730 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 31883014 31883058 -221373525 + AT_rich Low_complexity Low_complexity 1 44 0 242 139 18 2 chr2 31883276 31883442 -221373141 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 31883524 31883568 -221373015 + AT_rich Low_complexity Low_complexity 1 44 0 1961 132 17 10 chr2 31884170 31884459 -221372124 + AluSp SINE Alu 1 291 -22 1996 135 3 20 chr2 31884660 31884963 -221371620 - AluJb SINE Alu -14 298 1 311 167 0 0 chr2 31884965 31885013 -221371570 - MER58 DNA MER1_type -133 82 35 1649 173 0 33 chr2 31885843 31886149 -221370434 + AluJo SINE Alu 1 296 -16 2293 84 44 0 chr2 31886151 31886447 -221370136 + AluSg SINE Alu 1 309 -1 216 0 0 0 chr2 31886912 31886936 -221369647 + (T)n Simple_repeat Simple_repeat 1 24 0 1654 131 25 0 chr2 31886945 31887182 -221369401 - AluSx SINE Alu -69 243 1 2420 57 0 0 chr2 31887184 31887496 -221369087 - AluY SINE Alu 0 312 1 1554 176 4 11 chr2 31887496 31887774 -221368809 - AluJb SINE Alu -11 301 26 1172 60 0 0 chr2 31887955 31888088 -221368495 + AluSq/x SINE Alu 1 133 -180 2160 113 0 10 chr2 31888093 31888402 -221368181 + AluSg SINE Alu 1 306 -4 1291 266 71 63 chr2 31888440 31888872 -221367711 + HAL1 LINE L1 583 1010 -1497 2365 97 0 10 chr2 31888872 31889180 -221367403 + AluSx SINE Alu 1 305 -7 1291 266 71 63 chr2 31889180 31889275 -221367308 + HAL1 LINE L1 1010 1103 -1404 2062 96 44 0 chr2 31889275 31889546 -221367037 + AluSq SINE Alu 1 283 -30 1291 266 71 63 chr2 31889546 31890331 -221366252 + HAL1 LINE L1 1103 2128 -379 525 168 88 18 chr2 31890589 31890702 -221365881 + FLAM_A SINE Alu 22 142 0 297 290 145 8 chr2 31892006 31892130 -221364453 + MIR3 SINE MIR 60 200 -8 267 237 26 61 chr2 31892379 31892493 -221364090 - MER113 DNA MER1_type? -406 115 6 1994 159 0 0 chr2 31892886 31893188 -221363395 + AluSq SINE Alu 2 303 -10 25 0 0 0 chr2 31893231 31893256 -221363327 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr2 31893407 31893431 -221363152 + AT_rich Low_complexity Low_complexity 1 24 0 2352 75 20 13 chr2 31893434 31893739 -221362844 - AluSc SINE Alu -2 307 1 1112 139 6 0 chr2 31893741 31893907 -221362676 - AluSg/x SINE Alu -20 292 126 1889 166 0 17 chr2 31893951 31894253 -221362330 + AluSx SINE Alu 1 297 -15 27 49 0 0 chr2 31894820 31894861 -221361722 + AT_rich Low_complexity Low_complexity 1 41 0 28 29 0 0 chr2 31895327 31895362 -221361221 + AT_rich Low_complexity Low_complexity 1 35 0 2381 59 39 0 chr2 31895474 31895760 -221360823 + AluSp SINE Alu 5 301 -12 26 50 0 0 chr2 31896161 31896201 -221360382 + AT_rich Low_complexity Low_complexity 1 40 0 1515 159 51 48 chr2 31896300 31896595 -221359988 - AluJo SINE Alu -16 296 1 1138 108 0 0 chr2 31896627 31896785 -221359798 + AluSc SINE Alu 152 309 0 2325 108 0 3 chr2 31896852 31897157 -221359426 + AluSx SINE Alu 2 305 -7 1398 141 173 0 chr2 31897333 31897582 -221359001 + AluJb SINE Alu 1 292 -20 2294 114 0 0 chr2 31898072 31898371 -221358212 + AluSg SINE Alu 1 299 -11 383 129 0 0 chr2 31898403 31898465 -221358118 + L1MA1 LINE L1 6059 6120 -182 1648 138 0 0 chr2 31898465 31898689 -221357894 + AluSx SINE Alu 1 224 -88 387 0 0 0 chr2 31898704 31898747 -221357836 + (CTA)n Simple_repeat Simple_repeat 1 43 0 40 37 0 0 chr2 31898749 31898803 -221357780 + AT_rich Low_complexity Low_complexity 1 54 0 2162 110 40 3 chr2 31899455 31899754 -221356829 - AluSg SINE Alu 0 310 1 282 319 104 22 chr2 31899754 31899889 -221356694 + MIR SINE MIR 117 262 0 276 308 26 17 chr2 31899894 31900011 -221356572 - L3 LINE CR1 -569 1008 891 239 311 88 28 chr2 31900577 31900931 -221355652 + L1ME LINE L1 4252 4626 -1520 27 29 0 0 chr2 31901197 31901231 -221355352 + AT_rich Low_complexity Low_complexity 1 34 0 398 215 143 53 chr2 31901267 31901476 -221355107 + L1ME LINE L1 5476 5703 -418 21 0 0 0 chr2 31902015 31902036 -221354547 + AT_rich Low_complexity Low_complexity 1 21 0 257 263 24 124 chr2 31903451 31903660 -221352923 - MIR SINE MIR -13 249 62 550 176 0 11 chr2 31904235 31904326 -221352257 + 5S rRNA rRNA 1 90 -31 260 324 94 33 chr2 31904605 31904818 -221351765 - MIR SINE MIR 0 262 37 1563 127 0 13 chr2 31905403 31905632 -221350951 + AluSg/x SINE Alu 87 312 0 1262 281 62 29 chr2 31905871 31905950 -221350633 - L1ME3A LINE L1 -280 5890 5815 1235 108 5 11 chr2 31905950 31906136 -221350447 - L1PA14 LINE L1 -1 6160 5976 1262 281 62 29 chr2 31906136 31906665 -221349918 - L1ME3A LINE L1 -355 5815 5259 222 209 11 33 chr2 31907016 31907107 -221349476 + CT-rich Low_complexity Low_complexity 3 91 0 670 255 43 49 chr2 31907145 31907474 -221349109 - L1ME3A LINE L1 -1493 4653 4327 2196 160 11 11 chr2 31908356 31908731 -221347852 - THE1C LTR MaLR 0 375 1 646 194 125 6 chr2 31908850 31909010 -221347573 - MER97b DNA MER1_type? -874 179 1 211 255 20 0 chr2 31911034 31911085 -221345498 - MIR SINE MIR -55 153 102 329 343 14 0 chr2 31911412 31911558 -221345025 - MIR3 SINE MIR -1 207 60 593 247 31 59 chr2 31913120 31913325 -221343258 - L1ME4a LINE L1 -45 6076 5882 2122 135 0 3 chr2 31913325 31913629 -221342954 - AluSx SINE Alu -9 303 1 593 247 31 59 chr2 31913629 31913747 -221342836 - L1ME4a LINE L1 -239 5882 5762 484 209 43 122 chr2 31913751 31913981 -221342602 - L1ME4a LINE L1 -295 5826 5615 23 33 0 0 chr2 31913996 31914026 -221342557 + AT_rich Low_complexity Low_complexity 1 30 0 232 300 33 0 chr2 31915584 31915674 -221340909 + MIR SINE MIR 93 185 -77 256 311 33 33 chr2 31917256 31917346 -221339237 + MIR SINE MIR 8 97 -165 252 247 75 0 chr2 31917393 31917486 -221339097 - MIR SINE MIR -38 224 125 244 304 49 10 chr2 31917478 31917580 -221339003 + MIR SINE MIR 140 245 -17 * 2347 73 0 10 chr2 31918598 31918914 -221337669 + AluSq SINE Alu 1 313 0 1761 166 3 7 chr2 31918918 31919202 -221337381 + AluSx SINE Alu 1 283 -29 2268 85 11 0 chr2 31919344 31919677 -221336906 - AluSq SINE Alu 0 336 1 226 338 62 0 chr2 31920794 31920874 -221335709 + MIR SINE MIR 30 114 -94 375 276 179 5 chr2 31921105 31921301 -221335282 + MIR SINE MIR 7 236 -26 234 0 0 0 chr2 31921452 31921478 -221335105 + (TA)n Simple_repeat Simple_repeat 2 27 0 2335 83 0 58 chr2 31921478 31921804 -221334779 - AluSp SINE Alu -6 307 1 2184 113 0 0 chr2 31922824 31923107 -221333476 - AluSx SINE Alu -16 296 14 186 45 68 23 chr2 31923211 31923255 -221333328 + T-rich Low_complexity Low_complexity 2 47 0 26 50 0 0 chr2 31923266 31923306 -221333277 + AT_rich Low_complexity Low_complexity 1 40 0 181 216 20 0 chr2 31924224 31924275 -221332308 + L2 LINE L2 3000 3051 -221 258 203 0 34 chr2 31925614 31925673 -221330910 + MIR SINE MIR 117 173 -89 464 246 68 111 chr2 31925897 31926149 -221330434 + MIR SINE MIR 7 247 -15 2374 96 0 7 chr2 31926187 31926490 -221330093 - AluSc SINE Alu -8 301 1 202 254 68 0 chr2 31928079 31928138 -221328445 + MIR SINE MIR 120 182 -80 326 207 0 0 chr2 31928255 31928313 -221328270 - MER91B DNA MER1_type -127 63 6 1543 117 0 0 chr2 31928355 31928599 -221327984 - AluSc SINE Alu 0 309 98 217 239 15 15 chr2 31929073 31929140 -221327443 + (CA)n Simple_repeat Simple_repeat 2 68 0 306 0 0 0 chr2 31929170 31929204 -221327379 + (CA)n Simple_repeat Simple_repeat 1 34 0 330 357 117 13 chr2 31929349 31929503 -221327080 + MER91A DNA MER1_type 15 184 -12 214 238 109 33 chr2 31930000 31930113 -221326470 - MIR SINE MIR -60 148 14 498 268 21 20 chr2 31930656 31930832 -221325751 + MIR SINE MIR 19 192 -65 239 195 0 0 chr2 31931387 31931428 -221325155 - MIR SINE MIR -110 152 112 522 240 71 19 chr2 31931952 31932106 -221324477 - MIR3 SINE MIR -29 179 18 218 223 125 71 chr2 31932191 31932303 -221324280 - MIR SINE MIR -35 227 110 298 281 70 47 chr2 31932362 31932490 -221324093 - L2 LINE L2 -1 3271 3141 201 39 0 0 chr2 31933367 31933393 -221323190 + (GGGA)n Simple_repeat Simple_repeat 4 29 0 339 236 139 48 chr2 31933404 31933569 -221323014 + MIR SINE MIR 23 202 -60 321 215 38 0 chr2 31933864 31933943 -221322640 + MIR3 SINE MIR 93 174 -34 792 296 9 26 chr2 31934443 31934676 -221321907 + MIR SINE MIR 13 241 -21 886 162 92 0 chr2 31934694 31934867 -221321716 + MER5A DNA MER1_type 1 189 0 292 239 15 0 chr2 31935205 31935272 -221321311 + MIR SINE MIR 68 135 -73 180 250 0 0 chr2 31935278 31935314 -221321269 - MIR SINE MIR -116 146 111 2187 103 3 3 chr2 31935842 31936134 -221320449 + AluSx SINE Alu 1 292 -20 456 294 128 37 chr2 31936135 31936353 -221320230 - MIR SINE MIR -5 257 20 468 271 148 48 chr2 31936990 31937200 -221319383 + MIR SINE MIR 26 256 -6 407 269 46 0 chr2 31938319 31938449 -221318134 + MIR SINE MIR 111 246 -16 2093 116 17 7 chr2 31938559 31938852 -221317731 + AluSx SINE Alu 1 296 -16 6681 136 62 16 chr2 31939962 31940457 -221316126 - Tigger3b DNA MER2_type -1797 1231 760 2342 70 17 17 chr2 31940457 31940756 -221315827 - AluSc SINE Alu -10 299 1 6681 136 62 16 chr2 31940756 31941437 -221315146 - Tigger3b DNA MER2_type -2268 760 1 215 196 20 39 chr2 31941439 31941490 -221315093 + MER5B DNA MER1_type 126 175 -3 366 61 0 0 chr2 31942685 31942734 -221313849 + (CA)n Simple_repeat Simple_repeat 2 50 0 510 318 33 33 chr2 31943405 31943616 -221312967 - MIR SINE MIR -5 257 47 1290 189 124 130 chr2 31945280 31945785 -221310798 - LTR36 LTR ERV1 0 611 109 1905 121 7 59 chr2 31945785 31946090 -221310493 - AluSx SINE Alu -23 289 1 1290 189 124 130 chr2 31946090 31946199 -221310384 - LTR36 LTR ERV1 -502 109 1 387 286 132 50 chr2 31947084 31947448 -221309135 + MLT1I LTR MaLR 9 402 -7 2438 102 0 0 chr2 31947550 31947855 -221308728 + AluSg SINE Alu 1 305 -5 254 224 26 13 chr2 31948091 31948167 -221308416 + MLT1J LTR MaLR 95 171 -340 * 264 270 27 14 chr2 31948106 31948180 -221308403 + LTR67 LTR ERVL 115 189 -368 180 158 0 0 chr2 31948444 31948482 -221308101 + (TG)n Simple_repeat Simple_repeat 2 39 0 393 22 0 0 chr2 31949874 31949920 -221306663 + (CA)n Simple_repeat Simple_repeat 1 46 0 219 88 0 0 chr2 31949923 31949957 -221306626 + (TC)n Simple_repeat Simple_repeat 1 34 0 1437 207 39 24 chr2 31951009 31951347 -221305236 + LTR16A LTR ERVL 108 450 0 1376 169 24 4 chr2 31952785 31953033 -221303550 + L1MC1 LINE L1 6075 6327 -6 2189 115 0 3 chr2 31953033 31953328 -221303255 + AluSq SINE Alu 1 294 -19 28 29 0 0 chr2 31953328 31953363 -221303220 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr2 31953492 31953518 -221303065 + AT_rich Low_complexity Low_complexity 1 26 0 408 20 0 0 chr2 31954240 31954289 -221302294 + (TG)n Simple_repeat Simple_repeat 1 49 0 338 257 169 14 chr2 31954580 31954728 -221301855 + MIR SINE MIR 79 249 -13 633 211 6 6 chr2 31955547 31955708 -221300875 + FRAM SINE Alu 1 142 -34 219 69 0 0 chr2 31955740 31955769 -221300814 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 629 224 68 96 chr2 31956184 31956434 -221300149 - MIR SINE MIR 0 262 20 2065 70 8 8 chr2 31956567 31956826 -221299757 - AluSp SINE Alu -1 312 54 402 214 36 45 chr2 31958076 31958142 -221298441 + MER81 DNA DNA 1 67 -47 4325 90 0 0 chr2 31958142 31958696 -221297887 + MER41A LTR ERV1 1 554 0 402 214 36 45 chr2 31958696 31958741 -221297842 + MER81 DNA DNA 67 111 -3 1829 171 88 79 chr2 31959386 31959929 -221296654 + LTR10A LTR ERV1 1 548 -61 339 292 37 27 chr2 31960186 31960296 -221296287 + MIR SINE MIR 38 147 -67 2271 106 59 0 chr2 31960296 31960636 -221295947 + MLT1A1 LTR MaLR 1 360 -5 5121 94 1 11 chr2 31960637 31961380 -221295203 + LTR17 LTR ERV1 1 780 0 1502 200 34 0 chr2 31961536 31961801 -221294782 + AluJo SINE Alu 5 278 -34 198 103 0 0 chr2 31961833 31961862 -221294721 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 252 318 0 59 chr2 31962356 31962441 -221294142 - MIR SINE MIR -95 113 34 1905 151 23 0 chr2 31962589 31962888 -221293695 - AluSq SINE Alu -7 306 1 204 97 0 0 chr2 31962969 31963000 -221293583 + (GA)n Simple_repeat Simple_repeat 2 32 0 293 360 8 8 chr2 31963158 31963283 -221293300 - L2 LINE L2 0 3272 3148 411 281 0 0 chr2 31963296 31963392 -221293191 + MIR SINE MIR 59 154 -108 4437 98 32 33 chr2 31964552 31965213 -221291370 - PABL_A LTR ERV1 0 660 1 2096 145 3 0 chr2 31965793 31966097 -221290486 + AluSx SINE Alu 1 305 -7 488 274 111 26 chr2 31966496 31966649 -221289934 + MLT1I LTR MaLR 98 263 -146 2251 95 3 26 chr2 31966807 31967111 -221289472 + AluSp SINE Alu 1 297 -16 1877 152 26 3 chr2 31967660 31967962 -221288621 - AluJb SINE Alu -3 309 1 446 154 15 7 chr2 31968123 31968211 -221288372 + MLT1I LTR MaLR 324 445 -5 581 254 35 7 chr2 31968220 31968362 -221288221 - MIR3 SINE MIR -33 175 30 3464 151 25 79 chr2 31968384 31969115 -221287468 - LTR8 LTR ERV1 0 691 1 487 242 40 16 chr2 31969151 31969275 -221287308 + MIR3 SINE MIR 41 167 -41 3943 160 50 11 chr2 31969397 31970097 -221286486 - LTR8A LTR ERV1 0 727 1 1073 155 21 21 chr2 31970766 31970960 -221285623 + MLT1A1 LTR MaLR 1 194 -171 341 216 114 0 chr2 31970971 31971059 -221285524 - MIR SINE MIR -70 138 41 4935 128 67 5 chr2 31971132 31971908 -221284675 + LTR1B LTR ERV1 1 824 -2 226 308 7 96 chr2 31972280 31972426 -221284157 + MIR SINE MIR 106 238 -24 253 315 74 60 chr2 31973850 31974066 -221282517 - MIR SINE MIR -42 220 2 412 349 65 0 chr2 31974405 31974666 -221281917 + L1PA14 LINE L1 5648 5925 -236 * 2171 155 35 12 chr2 31974436 31974861 -221281722 + L1MB5 LINE L1 5686 6120 -54 269 271 74 33 chr2 31976115 31976237 -221280346 - MIR SINE MIR -44 218 92 1044 251 132 20 chr2 31976931 31977234 -221279349 - MER46C DNA MER2_type 0 338 2 672 287 30 10 chr2 31977234 31977436 -221279147 - MIR SINE MIR -1 261 56 405 316 168 5 chr2 31977734 31977943 -221278640 + MIR SINE MIR 4 246 -16 257 264 69 11 chr2 31978703 31978790 -221277793 + L2 LINE L2 3181 3272 0 294 106 0 0 chr2 31980416 31980463 -221276120 + (TG)n Simple_repeat Simple_repeat 1 47 0 440 321 34 17 chr2 31980799 31981159 -221275424 + ERVL LTR ERVL 4555 4698 -298 326 260 15 1 chr2 31981232 31981322 -221275261 + LTR16A LTR ERVL 5 95 -355 2390 132 3 8 chr2 31981346 31981716 -221274867 - L1PB1 LINE L1 -3 6148 5781 357 208 0 0 chr2 31981716 31981793 -221274790 + (TA)n Simple_repeat Simple_repeat 2 78 0 315 71 0 0 chr2 31981793 31981835 -221274748 - L1PB1 LINE L1 -360 5791 5750 15405 182 74 14 chr2 31981835 31987919 -221268664 - L1P5 LINE L1 -357 6510 90 2361 91 0 0 chr2 31988181 31988510 -221268073 - AluSc SINE Alu 0 329 1 392 310 64 23 chr2 31989018 31989189 -221267394 + MIR SINE MIR 20 197 -65 1938 144 14 7 chr2 31989359 31989650 -221266933 - AluJo SINE Alu -19 293 1 4430 135 20 0 chr2 31989650 31990345 -221266238 - L1MC1 LINE L1 -9 6324 5616 514 275 42 0 chr2 31990347 31990489 -221266094 + MIR SINE MIR 107 254 -8 852 204 34 24 chr2 31991761 31991967 -221264616 + MER3 DNA MER1_type 2 209 0 547 310 70 11 chr2 31992015 31992299 -221264284 + L2 LINE L2 2521 2821 -493 866 159 12 65 chr2 31992488 31992658 -221263925 - MER3 DNA MER1_type 0 209 49 379 272 109 105 chr2 31992682 31992995 -221263588 + L2 LINE L2 2958 3271 -1 204 312 55 9 chr2 31993119 31993228 -221263355 + MIR SINE MIR 100 213 -49 475 240 32 32 chr2 31993647 31993801 -221262782 + MER5A DNA MER1_type 10 163 -26 338 151 14 55 chr2 31995253 31995326 -221261257 - L1ME2 LINE L1 -2 6162 6093 238 187 165 55 chr2 31995521 31995612 -221260971 + L1ME4a LINE L1 5703 5802 -319 235 206 95 0 chr2 31995663 31995726 -221260857 + L1ME4a LINE L1 5983 6051 -70 2426 194 88 40 chr2 31996141 31996264 -221260319 + MLT1E2 LTR MaLR 7 123 -503 2266 110 10 0 chr2 31996264 31996565 -221260018 + AluSx SINE Alu 1 304 -8 2426 194 88 40 chr2 31996565 31997033 -221259550 + MLT1E2 LTR MaLR 123 626 0 234 335 51 61 chr2 31997131 31997328 -221259255 + L2 LINE L2 3075 3269 -3 315 322 75 37 chr2 31997607 31997902 -221258681 + L1MEd LINE L1 12 317 -5802 2318 223 87 49 chr2 31997933 31998645 -221257938 + MER21B LTR ERV1 12 750 -113 207 226 0 32 chr2 31999091 31999153 -221257430 - MIR SINE MIR -10 252 193 453 276 39 108 chr2 31999264 31999597 -221256986 + MLT1I LTR MaLR 94 403 -6 615 266 78 29 chr2 31999610 31999956 -221256627 + L1MEd LINE L1 895 1257 -4862 229 230 40 70 chr2 32000080 32000180 -221256403 + L1M2 LINE L1 2440 2536 -4313 2391 217 53 48 chr2 32001243 32001516 -221255067 - L1ME3A LINE L1 -5 6165 5895 1459 176 3 83 chr2 32001516 32001709 -221254874 - AluJb SINE Alu -14 298 140 1855 141 58 0 chr2 32001709 32002000 -221254583 + AluSg SINE Alu 1 308 -2 1459 176 3 83 chr2 32002000 32002130 -221254453 - AluJb SINE Alu -172 140 1 2391 217 53 48 chr2 32002130 32002569 -221254014 - L1ME3A LINE L1 -275 5895 5449 1145 200 5 9 chr2 32003392 32003607 -221252976 - MER20 DNA MER1_type -5 214 1 413 267 123 14 chr2 32004115 32004261 -221252322 - LTR16A1 LTR ERVL -295 162 1 1127 190 18 5 chr2 32004399 32004620 -221251963 - AluJo SINE Alu -3 309 86 296 272 89 9 chr2 32004622 32004813 -221251770 - MIR SINE MIR -48 214 8 455 295 68 10 chr2 32006159 32006366 -221250217 - MIR SINE MIR -24 238 20 322 282 0 0 chr2 32006383 32006461 -221250122 + MIR SINE MIR 109 186 -76 449 250 9 9 chr2 32006973 32007081 -221249502 - MIR SINE MIR -65 197 90 419 317 75 0 chr2 32008401 32008562 -221248021 + MIR3 SINE MIR 21 193 -15 195 310 42 0 chr2 32009326 32009397 -221247186 + MIR SINE MIR 140 213 -49 234 0 0 0 chr2 32010134 32010160 -221246423 + (TG)n Simple_repeat Simple_repeat 2 27 0 289 279 67 42 chr2 32010586 32010751 -221245832 - MIR3 SINE MIR -3 205 37 1790 174 16 20 chr2 32010787 32011092 -221245491 - AluJo SINE Alu -6 306 3 331 318 131 0 chr2 32012104 32012211 -221244372 - L2 LINE L2 0 3272 3152 423 330 11 16 chr2 32014238 32014420 -221242163 + MER5A DNA MER1_type 9 189 0 2231 123 0 3 chr2 32014638 32014948 -221241635 - AluSx SINE Alu -3 309 1 208 276 40 0 chr2 32016174 32016250 -221240333 + L2 LINE L2 3194 3272 0 2264 123 0 0 chr2 32016383 32016693 -221239890 - AluSx SINE Alu -2 310 1 1428 215 45 33 chr2 32017655 32017990 -221238593 + MER58B DNA MER1_type 2 340 -1 483 133 29 0 chr2 32019209 32019314 -221237269 + (TA)n Simple_repeat Simple_repeat 2 109 0 245 206 14 14 chr2 32019362 32019435 -221237148 + L1MCa LINE L1 1995 2067 -4359 356 217 39 72 chr2 32019444 32019624 -221236959 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 * 407 249 35 12 chr2 32019505 32019674 -221236909 + (TA)n Simple_repeat Simple_repeat 2 174 0 209 197 16 0 chr2 32019715 32019776 -221236807 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 212 286 0 0 chr2 32019792 32019855 -221236728 + (CATA)n Simple_repeat Simple_repeat 1 63 0 350 307 104 5 chr2 32020808 32021000 -221235583 + L2 LINE L2 2567 2777 -537 439 254 49 0 chr2 32021436 32021558 -221235025 - MIR SINE MIR -26 236 109 243 272 0 0 chr2 32021595 32021676 -221234907 + (TG)n Simple_repeat Simple_repeat 2 82 0 381 301 41 0 chr2 32023961 32024107 -221232476 - MIR3 SINE MIR -15 193 42 229 244 0 70 chr2 32025180 32025266 -221231317 - MIR SINE MIR -73 189 110 2398 68 3 0 chr2 32026292 32026584 -221229999 - AluSc SINE Alu -3 306 14 3666 237 94 62 chr2 32026761 32028329 -221228254 - HAL1 LINE L1 -10 2497 880 180 367 0 0 chr2 32028459 32028508 -221228075 + L2 LINE L2 3137 3185 -87 884 165 0 0 chr2 32028811 32028944 -221227639 - AluSq/x SINE Alu -180 133 1 9589 212 62 36 chr2 32029320 32032219 -221224364 + L1MDa LINE L1 54 2874 -3666 1456 214 144 42 chr2 32032219 32032677 -221223906 + MLT1D LTR MaLR 1 505 0 9589 212 62 36 chr2 32032677 32033416 -221223167 + L1MDa LINE L1 2874 3788 -2752 1545 176 27 40 chr2 32033416 32033790 -221222793 + L1MA3 LINE L1 5937 6305 0 9589 212 62 36 chr2 32033790 32033894 -221222689 + L1MDa LINE L1 3788 3888 -2652 1948 84 3 1 chr2 32033918 32034195 -221222388 + L1P LINE L1 2545 2825 -3321 2794 221 46 34 chr2 32034207 32034997 -221221586 + L1MDa LINE L1 3901 4699 -1841 635 222 108 54 chr2 32034996 32035181 -221221402 + L1MB7 LINE L1 5416 5610 -564 * 209 125 0 25 chr2 32035276 32035316 -221221267 + (CAAAA)n Simple_repeat Simple_repeat 4 42 0 1119 211 76 58 chr2 32036019 32036139 -221220444 + Tigger7 DNA MER2_type 1 117 -2370 2359 94 0 10 chr2 32036139 32036448 -221220135 + AluSx SINE Alu 1 306 -6 1119 211 76 58 chr2 32036448 32036866 -221219717 + Tigger7 DNA MER2_type 117 2487 0 2069 232 59 16 chr2 32038695 32038953 -221217630 + L1MB7 LINE L1 5587 5832 -352 2229 116 7 0 chr2 32038953 32039256 -221217327 + AluSx SINE Alu 1 305 -7 2069 232 59 16 chr2 32039256 32039570 -221217013 + L1MB7 LINE L1 5832 6184 0 225 264 85 19 chr2 32039672 32039778 -221216805 - L1ME4a LINE L1 -110 6011 5899 307 183 113 0 chr2 32042415 32042486 -221214097 - MIR3 SINE MIR -45 163 85 289 267 192 14 chr2 32042510 32042656 -221213927 - MIR SINE MIR -31 231 60 288 248 172 14 chr2 32044311 32044456 -221212127 - L3 LINE CR1 -1 1576 1409 288 262 255 0 chr2 32044760 32044909 -221211674 + MER117 DNA MER1_type 5 191 -6 26 0 0 0 chr2 32045235 32045261 -221211322 + AT_rich Low_complexity Low_complexity 1 26 0 214 273 26 52 chr2 32046561 32046638 -221209945 - L2 LINE L2 -8 3305 3231 860 135 0 30 chr2 32046642 32046775 -221209808 + FLAM_C SINE Alu 2 130 -3 391 296 30 9 chr2 32047204 32047346 -221209237 - MIR SINE MIR -31 177 47 652 197 8 0 chr2 32047878 32048005 -221208578 + MIR SINE MIR 45 172 -90 642 212 84 80 chr2 32048504 32048880 -221207703 + L1ME4a LINE L1 5704 6077 -44 865 249 11 51 chr2 32048938 32049211 -221207372 - MIR SINE MIR 0 262 1 997 217 77 0 chr2 32049212 32049419 -221207164 + MER58A DNA MER1_type 1 223 -1 324 0 0 0 chr2 32049456 32049492 -221207091 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 186 346 0 10 chr2 32050121 32050222 -221206361 + L2 LINE L2 2897 2996 -276 305 245 19 28 chr2 32050232 32050338 -221206245 + L1ME4a LINE L1 5837 5941 -180 211 203 43 29 chr2 32050348 32050417 -221206166 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 289 250 24 40 chr2 32050438 32050562 -221206021 + L1ME4a LINE L1 5942 6063 -58 187 311 33 0 chr2 32050711 32050772 -221205811 + L2 LINE L2 3247 3309 -4 1182 108 0 0 chr2 32050905 32051093 -221205490 - AluSp/q SINE Alu 0 344 157 288 253 33 11 chr2 32051573 32051664 -221204919 + MIR SINE MIR 48 140 -122 578 291 44 35 chr2 32051694 32051921 -221204662 - MIR SINE MIR 0 262 34 360 253 6 17 chr2 32052021 32052195 -221204388 + (TAG)n Simple_repeat Simple_repeat 1 172 0 265 333 0 11 chr2 32052218 32052305 -221204278 + (CAG)n Simple_repeat Simple_repeat 1 86 0 571 211 12 0 chr2 32052315 32052481 -221204102 + (TAG)n Simple_repeat Simple_repeat 1 168 0 189 175 0 0 chr2 32052515 32052555 -221204028 + (TAA)n Simple_repeat Simple_repeat 2 41 0 272 286 0 7 chr2 32052590 32052737 -221203846 + (TAG)n Simple_repeat Simple_repeat 2 147 0 573 239 0 0 chr2 32052757 32052937 -221203646 + (TAG)n Simple_repeat Simple_repeat 1 180 0 1588 186 30 20 chr2 32053672 32054142 -221202441 + AluJb SINE Alu 3 475 0 348 242 61 20 chr2 32055454 32055553 -221201030 - MIR SINE MIR -74 188 86 1863 189 58 58 chr2 32056079 32056218 -221200365 + MER63B DNA MER1_type 1 139 -923 2440 187 77 4 chr2 32056218 32056737 -221199846 + MER68 LTR ERV1 4 560 -2 1863 189 58 58 chr2 32056737 32056914 -221199669 + MER63B DNA MER1_type 139 320 -742 2181 130 0 0 chr2 32056914 32057213 -221199370 - AluSx SINE Alu -7 305 7 1863 189 58 58 chr2 32057213 32057330 -221199253 + MER63B DNA MER1_type 319 435 -1 21 36 0 0 chr2 32058305 32058333 -221198250 + AT_rich Low_complexity Low_complexity 1 28 0 473 170 57 60 chr2 32058701 32058839 -221197744 + MER5A DNA MER1_type 25 189 0 380 333 31 8 chr2 32059194 32059323 -221197260 - MIR3 SINE MIR -67 141 10 223 176 24 240 chr2 32059329 32059454 -221197129 + MER5B DNA MER1_type 75 172 -6 345 24 0 0 chr2 32060043 32060085 -221196498 + (TG)n Simple_repeat Simple_repeat 2 43 0 687 187 47 0 chr2 32060111 32060261 -221196322 - MIR SINE MIR -32 230 74 566 175 58 42 chr2 32061015 32061135 -221195448 + FRAM SINE Alu 42 163 -13 332 309 32 8 chr2 32061871 32061994 -221194589 + L2 LINE L2 3142 3267 -5 330 268 55 8 chr2 32062013 32062140 -221194443 - MIR SINE MIR -70 192 60 246 289 29 48 chr2 32062649 32062753 -221193830 - MIR SINE MIR -76 186 85 722 130 0 8 chr2 32062846 32062969 -221193614 + (GGAA)n Simple_repeat Simple_repeat 2 123 0 216 0 0 0 chr2 32063315 32063339 -221193244 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 231 311 93 71 chr2 32063460 32063643 -221192940 - L2 LINE L2 -91 3181 2995 192 77 0 0 chr2 32065396 32065422 -221191161 + (GAAA)n Simple_repeat Simple_repeat 4 29 0 5773 199 36 22 chr2 32065770 32067765 -221188818 - L1MC1 LINE L1 -5 6608 4592 * 11670 191 60 21 chr2 32067761 32068319 -221188264 - L1MC1 LINE L1 -2524 3902 3367 2250 104 0 0 chr2 32068319 32068644 -221187939 - AluSg SINE Alu 0 327 3 11670 191 60 21 chr2 32068644 32071839 -221184744 - L1MC1 LINE L1 -3059 3367 2 246 303 119 28 chr2 32072393 32072516 -221184067 - MIR SINE MIR -12 250 140 544 77 26 0 chr2 32072516 32072594 -221183989 + MADE1 DNA Mariner 1 80 0 246 303 119 28 chr2 32072594 32072688 -221183895 - MIR SINE MIR -122 140 13 270 258 90 58 chr2 32073756 32073911 -221182672 + L2 LINE L2 2937 3096 -176 593 293 39 0 chr2 32074731 32074939 -221181644 + MIR SINE MIR 43 258 -4 669 229 146 4 chr2 32074996 32075236 -221181347 - L2 LINE L2 -811 2503 2230 2014 136 61 12 chr2 32075495 32075841 -221180742 + THE1B LTR MaLR 1 363 -1 1908 68 0 4 chr2 32076157 32076391 -221180192 - AluY SINE Alu -7 304 72 313 291 60 8 chr2 32076555 32076672 -221179911 - MER113 DNA MER1_type? -115 406 284 294 331 38 15 chr2 32077788 32077921 -221178662 - L2 LINE L2 0 3272 3137 965 264 19 19 chr2 32078096 32078361 -221178222 + MER93a LTR ERV1 128 392 -10 366 303 34 8 chr2 32078382 32078501 -221178082 - L2 LINE L2 -165 3107 2986 216 260 0 0 chr2 32078865 32078915 -221177668 + (CA)n Simple_repeat Simple_repeat 1 50 0 23 33 0 0 chr2 32080515 32080545 -221176038 + AT_rich Low_complexity Low_complexity 1 30 0 366 258 94 31 chr2 32081041 32081200 -221175383 + MIR SINE MIR 94 262 0 2391 153 75 5 chr2 32082000 32082400 -221174183 + MSTA LTR MaLR 1 428 0 197 375 95 13 chr2 32083945 32084177 -221172406 + L2 LINE L2 2712 2962 -352 618 235 162 0 chr2 32084407 32084611 -221171972 + L1MC4 LINE L1 6979 7215 -827 5523 99 11 5 chr2 32084611 32085366 -221171217 + L1MA2 LINE L1 5546 6304 0 4718 143 72 19 chr2 32085459 32086324 -221170259 + L1MB3 LINE L1 5270 6180 -3 2157 235 69 25 chr2 32086311 32086926 -221169657 + L1MC4 LINE L1 7182 7831 -211 * 2149 103 7 3 chr2 32086926 32087227 -221169356 + AluSg1 SINE Alu 1 302 -7 2157 235 69 25 chr2 32087227 32087296 -221169287 + L1MC4 LINE L1 7831 7896 -146 21 82 0 0 chr2 32087308 32087357 -221169226 + AT_rich Low_complexity Low_complexity 1 49 0 497 242 8 0 chr2 32087405 32087533 -221169050 + L1MC4 LINE L1 7914 8042 0 225 347 0 28 chr2 32087584 32087656 -221168927 - L2 LINE L2 0 3272 3203 221 377 54 15 chr2 32087716 32087846 -221168737 + L2 LINE L2 3122 3256 -16 353 75 19 0 chr2 32087857 32087910 -221168673 + (TGAG)n Simple_repeat Simple_repeat 2 55 0 2319 35 0 0 chr2 32088308 32088567 -221168016 + L1PA5 LINE L1 5895 6153 -1 218 367 11 0 chr2 32089056 32089146 -221167437 - L3 LINE CR1 -5 1572 1482 261 0 0 0 chr2 32091660 32091689 -221164894 + (A)n Simple_repeat Simple_repeat 1 29 0 482 158 25 125 chr2 32091950 32092070 -221164513 - MER81 DNA DNA -2 112 5 2102 121 7 0 chr2 32092086 32092376 -221164207 + AluSx SINE Alu 1 292 -20 887 174 54 27 chr2 32092416 32092600 -221163983 + MER20 DNA MER1_type 31 219 0 338 270 99 36 chr2 32092802 32092966 -221163617 + MIR SINE MIR 11 183 -25 1184 195 46 4 chr2 32093274 32093536 -221163047 - L1MA8 LINE L1 -3 6288 6016 938 131 0 0 chr2 32093537 32093667 -221162916 - AluSx SINE Alu -37 275 146 990 68 0 0 chr2 32093847 32093964 -221162619 - AluSx SINE Alu -170 142 26 4373 223 49 42 chr2 32093968 32096228 -221160355 - L1 LINE L1 -3664 3442 1478 1937 161 10 82 chr2 32096233 32096625 -221159958 - L1 LINE L1 -6666 364 1 431 264 28 56 chr2 32097546 32097690 -221158893 - MIR SINE MIR -56 206 67 356 301 57 8 chr2 32097827 32097950 -221158633 + L2 LINE L2 3136 3264 -8 738 300 60 23 chr2 32098713 32099149 -221157434 + MLT1J1 LTR MaLR 1 446 0 333 243 72 36 chr2 32099150 32099261 -221157322 + L2 LINE L2 3199 3313 0 208 186 0 68 chr2 32099392 32099451 -221157132 + T-rich Low_complexity Low_complexity 4 58 0 470 316 68 26 chr2 32099476 32099666 -221156917 + MIR3 SINE MIR 3 200 -8 189 207 0 0 chr2 32099925 32099954 -221156629 - L2 LINE L2 -37 3235 3207 2375 172 71 0 chr2 32100094 32100489 -221156094 + MSTB LTR MaLR 4 426 0 458 263 172 25 chr2 32101467 32101665 -221154918 - MIR SINE MIR -7 255 29 204 143 24 24 chr2 32103194 32103236 -221153347 + MIR3 SINE MIR 164 205 -3 494 31 16 0 chr2 32103245 32103309 -221153274 + (TG)n Simple_repeat Simple_repeat 2 66 0 2067 149 0 0 chr2 32103483 32103784 -221152799 - AluSx SINE Alu -9 303 3 1470 313 64 37 chr2 32104070 32104745 -221151838 + MER115 DNA AcHobo 1 693 0 268 315 120 32 chr2 32104968 32105184 -221151399 + L2 LINE L2 2826 3060 -212 293 292 67 17 chr2 32107588 32107708 -221148875 + MIR SINE MIR 58 183 -79 2479 75 0 3 chr2 32108066 32108373 -221148210 + AluY SINE Alu 1 306 -5 234 208 94 0 chr2 32108630 32108683 -221147900 - MLT1J1 LTR MaLR -285 161 104 498 321 153 10 chr2 32108706 32109014 -221147569 - MLT1I LTR MaLR -3 406 55 1616 303 109 84 chr2 32109356 32111541 -221145042 - L2 LINE L2 -4 3268 1012 1653 175 101 27 chr2 32111670 32112035 -221144548 - L1ME2 LINE L1 -19 6145 5754 1252 245 111 10 chr2 32112036 32112536 -221144047 - L1ME2 LINE L1 -536 5628 5083 12112 22 0 0 chr2 32112536 32113925 -221142658 - L1PA3 LINE L1 -948 5198 3810 8002 32 2 0 chr2 32113925 32114944 -221141639 + L1PA3 LINE L1 5185 6205 0 2288 209 102 39 chr2 32114976 32115179 -221141404 - L1ME2 LINE L1 -1395 4751 4562 2480 55 7 3 chr2 32115179 32115489 -221141094 + AluY SINE Alu 1 311 0 2288 209 102 39 chr2 32115489 32115935 -221140648 - L1ME2 LINE L1 -1584 4562 4061 2316 98 0 28 chr2 32116381 32116699 -221139884 + AluSx SINE Alu 1 309 -3 285 332 159 5 chr2 32116942 32117162 -221139421 - MIR SINE MIR -5 257 4 338 298 32 0 chr2 32117224 32117318 -221139265 + L2 LINE L2 3150 3246 -26 345 298 43 39 chr2 32117554 32117836 -221138747 - L1ME2 LINE L1 -3754 2392 2110 3313 227 22 11 chr2 32118158 32118964 -221137619 + L1 LINE L1 2396 3210 -2936 2001 170 56 17 chr2 32118968 32119327 -221137256 - MSTA LTR MaLR -54 374 2 21 36 0 0 chr2 32119541 32119569 -221137014 + AT_rich Low_complexity Low_complexity 1 28 0 4394 103 31 5 chr2 32119570 32120181 -221136402 - L1PA14 LINE L1 -3 6158 5532 593 91 1 0 chr2 32120181 32120269 -221136314 + L1PA14 LINE L1 5451 5527 -634 5716 76 30 60 chr2 32120297 32121156 -221135427 + L1MA1 LINE L1 5468 6300 -2 305 177 51 13 chr2 32122124 32122203 -221134380 + MER103 DNA DNA 25 106 -60 2916 133 45 6 chr2 32122322 32122789 -221133794 - L1MB3 LINE L1 0 6183 5699 2965 79 3 0 chr2 32124835 32125189 -221131394 + THE1A LTR MaLR 1 355 0 272 322 55 50 chr2 32125547 32125749 -221130834 - LTR67 LTR ERVL -14 543 341 20148 169 28 9 chr2 32125839 32127565 -221129018 + L1MA2 LINE L1 13 1705 -5860 876 69 46 17 chr2 32127565 32127738 -221128845 + GA-rich Low_complexity Low_complexity 1 178 0 20148 169 28 9 chr2 32127738 32129464 -221127119 + L1MA2 LINE L1 1705 3531 -4034 8648 129 42 21 chr2 32129465 32131156 -221125427 - MER52-int LTR ERV1 -2097 3849 2620 4087 139 16 27 chr2 32131160 32132310 -221124273 - MER52-int LTR ERV1 -4004 1451 632 320 250 0 13 chr2 32132310 32132386 -221124197 - MER52-int LTR ERV1 -3548 3657 3583 4386 204 39 46 chr2 32132402 32133548 -221123035 - MER52-int LTR ERV1 -436 4781 411 2634 169 97 12 chr2 32133764 32134661 -221121922 - LTR28 LTR ERV1 0 1020 1 13726 158 11 16 chr2 32134661 32138583 -221118000 + L1MA2 LINE L1 3823 7723 0 371 280 34 42 chr2 32138909 32139054 -221117529 - MIR SINE MIR -62 146 6 548 296 133 4 chr2 32139565 32139734 -221116849 - L2 LINE L2 -470 2844 2637 378 0 0 0 chr2 32139734 32139776 -221116807 + (TG)n Simple_repeat Simple_repeat 2 43 0 548 296 133 4 chr2 32139776 32139832 -221116751 - L2 LINE L2 -677 2637 2590 1241 219 72 42 chr2 32139841 32140288 -221116295 + MLT1C LTR MaLR 6 465 -2 1532 214 76 7 chr2 32140291 32140756 -221115827 - MLT1F LTR MaLR 0 542 1 1892 285 282 18 chr2 32140756 32142080 -221114503 - L2 LINE L2 -721 2593 921 949 221 28 9 chr2 32142175 32142392 -221114191 + MER58A DNA MER1_type 1 221 -3 534 154 115 0 chr2 32142598 32142702 -221113881 + FLAM_A SINE Alu 22 137 -5 849 186 9 38 chr2 32142726 32142936 -221113647 - MER96B DNA MER1_type? 0 417 214 2514 103 31 14 chr2 32144064 32144422 -221112161 + THE1B LTR MaLR 1 364 0 2077 94 0 0 chr2 32144833 32145108 -221111475 - AluY SINE Alu -6 305 31 761 313 63 0 chr2 32145247 32145515 -221111068 + HERVL LTR ERVL 2996 3280 -2374 1594 339 79 20 chr2 32145736 32146790 -221109793 - ERVL LTR ERVL -3264 2500 1348 2272 123 3 0 chr2 32146790 32147100 -221109483 - AluSx SINE Alu -1 311 1 1594 339 79 20 chr2 32147100 32147392 -221109191 - ERVL LTR ERVL -4416 1348 1075 377 235 17 62 chr2 32147416 32147595 -221108988 - LTR33A LTR ERVL 0 523 353 2093 158 31 21 chr2 32147595 32147748 -221108835 - MLT1B LTR MaLR 0 390 240 2116 193 68 36 chr2 32147748 32148250 -221108333 - MLT2B1 LTR ERVL 0 520 3 2093 158 31 21 chr2 32148250 32148481 -221108102 - MLT1B LTR MaLR -150 240 2 228 329 49 0 chr2 32148814 32148957 -221107626 - LTR33A LTR ERVL -371 152 3 548 326 42 34 chr2 32148972 32149211 -221107372 - L2 LINE L2 -266 3047 2807 385 257 22 52 chr2 32149227 32149363 -221107220 + MER94 DNA DNA 3 134 0 833 252 77 15 chr2 32149363 32149637 -221106946 - L2 LINE L2 -513 2801 2511 1285 313 47 27 chr2 32149655 32150252 -221106331 + L2 LINE L2 2115 2723 -591 247 285 99 29 chr2 32152376 32152548 -221104035 - L2 LINE L2 -1152 2162 1979 859 230 75 5 chr2 32152573 32152773 -221103810 + MLT1F1 LTR MaLR 354 567 0 261 302 94 55 chr2 32152774 32153009 -221103574 - L2 LINE L2 -1427 1887 1644 474 350 63 5 chr2 32154499 32154722 -221101861 - MIR SINE MIR -26 236 1 17402 175 15 10 chr2 32155276 32162553 -221094030 - L1PA14 LINE L1 -11 7588 11 570 234 8 8 chr2 32162583 32162711 -221093872 - FLAM_C SINE Alu -4 129 2 755 326 70 19 chr2 32163065 32163877 -221092706 - L1M4 LINE L1 -1453 4693 3840 2186 134 3 6 chr2 32164250 32164563 -221092020 - AluSx SINE Alu 0 312 1 2138 130 0 0 chr2 32164572 32164864 -221091719 - AluSg SINE Alu -18 292 1 23 33 0 0 chr2 32164906 32164936 -221091647 + AT_rich Low_complexity Low_complexity 1 30 0 7193 92 21 36 chr2 32165020 32168322 -221088261 + L1PA6 LINE L1 12 3176 -2978 3464 88 2 0 chr2 32168322 32168786 -221087797 + L1PA5 LINE L1 5688 6153 -1 7193 92 21 36 chr2 32168786 32171719 -221084864 + L1PA6 LINE L1 3176 6152 -2 345 241 152 25 chr2 32171725 32171883 -221084700 - L1M4 LINE L1 -2867 3279 3102 733 215 107 74 chr2 32171883 32172246 -221084337 + L1ME2 LINE L1 5685 6059 -105 286 103 0 0 chr2 32172246 32172285 -221084298 - THE1B LTR MaLR -2 353 315 41477 39 11 1 chr2 32172285 32178374 -221078209 + L1PA3 LINE L1 5 6150 -5 21 71 0 0 chr2 32178374 32178416 -221078167 + AT_rich Low_complexity Low_complexity 1 42 0 2135 91 29 44 chr2 32178416 32178757 -221077826 - THE1B LTR MaLR -28 336 1 498 201 13 3 chr2 32178757 32178877 -221077706 + L1ME2 LINE L1 6052 6334 0 * 1534 213 64 7 chr2 32178873 32179281 -221077302 + L1ME2 LINE L1 5428 5858 -306 1073 182 13 17 chr2 32181485 32181716 -221074867 - MER96B DNA MER1_type? -17 400 171 435 283 27 33 chr2 32182167 32182351 -221074232 + L1ME1 LINE L1 346 528 -5868 1652 260 67 56 chr2 32182365 32183913 -221072670 + L1ME1 LINE L1 1273 2848 -3558 1014 141 20 0 chr2 32183928 32184183 -221072400 - L1M2 LINE L1 -743 5403 5190 5491 238 40 39 chr2 32184210 32185000 -221071583 + L1ME1 LINE L1 3420 4207 -2219 233 57 29 0 chr2 32185000 32185035 -221071548 + (CA)n Simple_repeat Simple_repeat 1 36 0 5491 238 40 39 chr2 32185035 32186307 -221070276 + L1ME1 LINE L1 4207 5552 -874 1572 169 61 4 chr2 32186307 32186586 -221069997 + AluJo SINE Alu 7 301 -11 5491 238 40 39 chr2 32186586 32187225 -221069358 + L1ME1 LINE L1 5552 6188 -238 7098 124 54 14 chr2 32187241 32188487 -221068096 - HSMAR2 DNA Mariner -4 1298 4 535 273 44 0 chr2 32188503 32188686 -221067897 + L1ME1 LINE L1 6217 6407 -19 301 287 108 23 chr2 32189294 32189423 -221067160 - L3 LINE CR1 -11 1566 1427 2209 137 129 3 chr2 32189989 32190369 -221066214 - MSTA LTR MaLR 0 428 1 267 54 0 0 chr2 32190546 32190583 -221066000 + (TG)n Simple_repeat Simple_repeat 2 38 0 2452 69 0 7 chr2 32190605 32190908 -221065675 - AluY SINE Alu -10 301 1 1471 263 55 23 chr2 32191403 32192135 -221064448 - L2 LINE L2 -13 3300 2554 1423 244 90 35 chr2 32192936 32193627 -221062956 - L1MCc LINE L1 -4888 1535 964 473 233 0 0 chr2 32193627 32193730 -221062853 - MER81 DNA DNA -6 108 6 227 255 53 11 chr2 32193735 32193829 -221062754 - L1MCc LINE L1 -6070 353 256 305 289 56 52 chr2 32193882 32194131 -221062452 - L1MCc LINE L1 -5525 898 649 1063 99 3 2 chr2 32194478 32194782 -221061801 + THE1A LTR MaLR 1 355 0 11538 100 11 0 chr2 32194782 32196342 -221060241 + THE1A-int LTR MaLR 1 1578 -2 2578 52 86 0 chr2 32196344 32196671 -221059912 + THE1A LTR MaLR 1 355 0 244 253 12 12 chr2 32196699 32196782 -221059801 - L1MCc LINE L1 -5968 455 373 503 250 0 0 chr2 32196788 32196900 -221059683 - MER81 DNA DNA 0 114 3 852 257 109 3 chr2 32196902 32197206 -221059377 - L1MCc LINE L1 -6070 353 18 344 280 120 0 chr2 32199375 32199500 -221057083 + MIR3 SINE MIR 62 201 -7 489 273 60 28 chr2 32200838 32201054 -221055529 - Charlie8 DNA MER1_type -2194 223 1 615 183 13 20 chr2 32202364 32202517 -221054066 + L1MB4 LINE L1 6029 6180 0 1865 201 25 38 chr2 32202658 32203131 -221053452 + MLT1C LTR MaLR 1 467 0 188 182 57 125 chr2 32204370 32204411 -221052172 - MER5B DNA MER1_type 0 178 144 1805 146 14 4 chr2 32204411 32204725 -221051858 + AluSx SINE Alu 1 317 0 188 182 57 125 chr2 32204725 32204770 -221051813 - MER5B DNA MER1_type -34 144 97 383 270 118 61 chr2 32207850 32208146 -221048437 + MLT1L LTR MaLR 223 535 -80 342 0 0 0 chr2 32208286 32208324 -221048259 + (CA)n Simple_repeat Simple_repeat 1 38 0 294 241 11 11 chr2 32208324 32208411 -221048172 - L1MC4a LINE L1 -1879 5929 5843 832 292 35 36 chr2 32208777 32208890 -221047693 - L2 LINE L2 -243 3070 2958 1339 131 63 23 chr2 32208890 32209111 -221047472 - MER30 DNA MER1_type 0 230 1 832 292 35 36 chr2 32209111 32209526 -221047057 - L2 LINE L2 -355 2958 2542 24 32 0 0 chr2 32209915 32209946 -221046637 + AT_rich Low_complexity Low_complexity 1 31 0 230 342 13 26 chr2 32210073 32210149 -221046434 - MIR SINE MIR -102 106 32 183 246 0 0 chr2 32210521 32210578 -221046005 + (CA)n Simple_repeat Simple_repeat 2 58 0 2385 95 0 0 chr2 32210953 32211249 -221045334 - AluSg SINE Alu -14 296 1 240 299 276 0 chr2 32211798 32211932 -221044651 + MIR SINE MIR 12 182 -80 649 220 126 27 chr2 32212168 32212522 -221044061 - MLT1J2 LTR MaLR 0 450 20 3067 267 102 29 chr2 32213187 32213635 -221042948 + L2 LINE L2 1712 2126 -1188 1045 201 115 75 chr2 32213635 32213983 -221042600 + MLT1A1 LTR MaLR 4 365 0 3067 267 102 29 chr2 32213983 32214629 -221041954 + L2 LINE L2 2126 2886 -428 713 286 97 24 chr2 32214608 32214898 -221041685 + L2 LINE L2 3001 3311 -2 * 2581 264 64 24 chr2 32214977 32215911 -221040672 + L1MDa LINE L1 19 1139 -5401 1260 181 53 51 chr2 32215909 32216396 -221040187 + L1MDa LINE L1 2163 2650 -3890 * 5049 157 9 34 chr2 32216469 32217451 -221039132 + L1M4c LINE L1 17 974 -5410 3539 191 42 14 chr2 32217432 32218145 -221038438 + L1MB3 LINE L1 12 744 -6821 * 532 124 11 0 chr2 32218146 32218235 -221038348 + L1MA3 LINE L1 6214 6303 -2 993 193 15 20 chr2 32218241 32218460 -221038123 + AluJo SINE Alu 87 304 0 6233 214 83 27 chr2 32218460 32222300 -221034283 + L1MB3 LINE L1 2136 5761 -1804 2515 159 9 2 chr2 32222300 32222741 -221033842 + L1PA16 LINE L1 5723 6166 0 2232 91 0 3 chr2 32222744 32223066 -221033517 + AluSp SINE Alu 1 321 0 6233 214 83 27 chr2 32223066 32223156 -221033427 + L1MB3 LINE L1 5762 6290 -1275 368 141 16 0 chr2 32223156 32223220 -221033363 + MLT2B3 LTR ERVL 1 65 -489 1740 175 70 96 chr2 32223322 32223768 -221032815 + MLT2B3 LTR ERVL 75 508 -46 255 93 0 0 chr2 32223792 32223835 -221032748 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 299 161 0 0 chr2 32223844 32223900 -221032683 + MLT2B3 LTR ERVL 465 520 0 4093 173 56 13 chr2 32223900 32225011 -221031572 + L1MB3 LINE L1 6286 7451 -151 1981 113 0 0 chr2 32225011 32225325 -221031258 - AluY SINE Alu 0 330 17 4093 173 56 13 chr2 32225325 32225482 -221031101 + L1MB3 LINE L1 7451 7600 -2 1587 262 25 21 chr2 32225500 32226111 -221030472 + L1MC/D LINE L1 2315 2927 -3219 3047 245 80 36 chr2 32226181 32227280 -221029303 + L1MC/D LINE L1 3505 4674 -1472 1799 181 16 11 chr2 32227280 32227644 -221028939 - MER47A DNA MER2_type 0 366 1 3047 245 80 36 chr2 32227644 32227885 -221028698 + L1MC/D LINE L1 4674 4903 -1243 532 203 8 0 chr2 32227890 32228013 -221028570 + L1MC/D LINE L1 5052 5175 -971 686 299 55 30 chr2 32228016 32228380 -221028203 + L1M3c LINE L1 523 895 -5768 2527 252 21 13 chr2 32228496 32229583 -221027000 + L1M3c LINE L1 1287 2360 -4373 230 192 0 0 chr2 32229587 32229639 -221026944 + L1MC/D LINE L1 5774 5825 -417 519 17 0 0 chr2 32230854 32230914 -221025669 + (TG)n Simple_repeat Simple_repeat 2 61 0 300 324 10 29 chr2 32230925 32231027 -221025556 - MIR SINE MIR -72 136 37 442 280 101 31 chr2 32231433 32231690 -221024893 + MLT1K LTR MaLR 311 585 -3 741 200 8 0 chr2 32231754 32231884 -221024699 + FLAM_A SINE Alu 1 131 -2 631 184 0 0 chr2 32231782 32231891 -221024692 + FLAM_A SINE Alu 30 138 -4 1160 224 135 70 chr2 32232258 32232732 -221023851 + MLT1D LTR MaLR 1 505 0 1181 238 24 4 chr2 32232813 32233065 -221023518 - MIR SINE MIR -4 258 2 314 281 34 34 chr2 32233082 32233260 -221023323 + MER5B DNA MER1_type 1 178 0 1411 194 30 33 chr2 32234226 32234587 -221021996 - MLT1C LTR MaLR -1 466 107 307 263 26 0 chr2 32234587 32234663 -221021920 + Tigger3(Golem) DNA MER2_type 1 78 -2951 * 1244 166 0 0 chr2 32234655 32234866 -221021717 + Tigger3(Golem) DNA MER2_type 2816 3026 -3 369 180 135 0 chr2 32234866 32234950 -221021633 - MLT1C LTR MaLR -366 101 6 396 0 0 0 chr2 32235766 32235810 -221020773 + (CA)n Simple_repeat Simple_repeat 1 44 0 21 0 0 0 chr2 32237721 32237742 -221018841 + AT_rich Low_complexity Low_complexity 1 21 0 1494 120 52 4 chr2 32238176 32238443 -221018140 - L1MA3 LINE L1 -2 6303 6024 1204 122 11 0 chr2 32238564 32238753 -221017830 + L1PA16 LINE L1 5954 6144 -22 3420 263 93 18 chr2 32239255 32240778 -221015805 + L1ME LINE L1 37 1672 -4724 2983 247 38 34 chr2 32240779 32242483 -221014100 + L1ME LINE L1 1724 3411 -2804 315 305 45 32 chr2 32243000 32243154 -221013429 - L1ME LINE L1 -328 5793 5638 216 0 0 0 chr2 32243363 32243387 -221013196 + (TG)n Simple_repeat Simple_repeat 2 25 0 435 245 12 20 chr2 32243454 32243680 -221012903 - L1ME1 LINE L1 -105 6061 5678 3925 177 55 25 chr2 32243680 32245155 -221011428 - MER52A LTR ERV1 0 1755 1 1609 211 25 0 chr2 32245155 32245510 -221011073 - L1ME1 LINE L1 -488 5678 5315 1069 186 30 89 chr2 32245516 32245854 -221010729 + L1ME LINE L1 4934 5251 -964 9535 159 33 1 chr2 32245858 32248384 -221008199 + L1PA15 LINE L1 3540 6144 -21 635 163 14 7 chr2 32248399 32248540 -221008043 + L1ME LINE L1 5243 5384 -831 263 309 159 0 chr2 32249097 32249223 -221007360 + MIR SINE MIR 111 256 -6 328 291 45 8 chr2 32250213 32250347 -221006236 + MIR3 SINE MIR 1 139 -69 972 207 140 0 chr2 32250748 32250941 -221005642 + MER58A DNA MER1_type 2 221 -3 204 282 214 0 chr2 32251202 32251333 -221005250 + MIR3 SINE MIR 19 177 -31 294 288 0 99 chr2 32251394 32251505 -221005078 - L2 LINE L2 -181 3091 2992 7284 26 0 0 chr2 32251928 32253088 -221003495 + L1HS LINE L1 4994 6153 -2 180 0 0 0 chr2 32253092 32253112 -221003471 + (A)n Simple_repeat Simple_repeat 1 20 0 412 256 41 8 chr2 32253342 32253463 -221003120 - L2 LINE L2 0 3313 3189 255 209 127 18 chr2 32253729 32253839 -221002744 + L1ME LINE L1 5655 5776 -414 40 59 0 0 chr2 32254150 32254218 -221002365 + AT_rich Low_complexity Low_complexity 1 68 0 642 276 82 30 chr2 32254254 32254486 -221002097 + MIR SINE MIR 1 244 -18 200 194 0 0 chr2 32255054 32255090 -221001493 + L2 LINE L2 3233 3268 -4 285 331 69 0 chr2 32255520 32255650 -221000933 + MIR SINE MIR 76 214 -48 21 0 0 0 chr2 32256379 32256400 -221000183 + GC_rich Low_complexity Low_complexity 1 21 0 221 348 69 29 chr2 32258502 32258706 -220997877 + L2 LINE L2 2191 2402 -912 468 264 135 16 chr2 32259188 32259381 -220997202 - MLT1H LTR MaLR -320 229 14 432 243 79 7 chr2 32259388 32259540 -220997043 - L1ME3A LINE L1 -19 6151 5989 342 115 0 0 chr2 32259543 32259604 -220996979 + (A)n Simple_repeat Simple_repeat 1 61 0 472 184 0 0 chr2 32259605 32259692 -220996891 - L1ME3A LINE L1 -190 5980 5894 1716 199 45 13 chr2 32259739 32260135 -220996448 - MER74A LTR ERVL -70 488 80 253 263 105 13 chr2 32260209 32260361 -220996222 + L1MEc LINE L1 660 825 -5571 559 282 62 46 chr2 32260367 32260672 -220995911 - MER21B LTR ERV1 -153 710 401 15294 159 69 20 chr2 32260672 32261953 -220994630 + L1M1 LINE L1 27 1244 -6321 1192 82 18 6 chr2 32261953 32262149 -220994434 - L1PB1 LINE L1 0 6151 5980 15294 159 69 20 chr2 32262149 32262950 -220993633 + L1M1 LINE L1 1244 2004 -5561 6467 72 10 12 chr2 32262950 32263842 -220992741 + L1PA8 LINE L1 5270 6159 -13 15294 159 69 20 chr2 32263842 32264767 -220991816 + L1M1 LINE L1 2004 3183 -4382 2444 106 21 5 chr2 32264774 32265152 -220991431 + L1PB1 LINE L1 1 384 -6479 3590 150 21 38 chr2 32265519 32266233 -220990350 + L1PB1 LINE L1 397 1098 -5765 1097 41 14 0 chr2 32266227 32266373 -220990210 - L1PA4 LINE L1 -1613 4533 4386 * 7229 48 2 1 chr2 32266373 32268027 -220988556 + L1PA4 LINE L1 4502 6154 -1 12910 195 24 11 chr2 32268098 32268850 -220987733 + L1PB1 LINE L1 1084 1825 -5042 3000 31 0 0 chr2 32268850 32269202 -220987381 + L1PA3 LINE L1 5804 6155 0 12910 195 24 11 chr2 32269202 32272063 -220984520 + L1PB1 LINE L1 1825 4847 -2020 1784 128 88 0 chr2 32272063 32272336 -220984247 + AluSg SINE Alu 6 302 -8 12910 195 24 11 chr2 32272336 32274379 -220982204 + L1PB1 LINE L1 4847 6862 -5 4008 180 47 9 chr2 32274380 32275756 -220980827 + L1MA2 LINE L1 3168 4600 -2965 4579 134 16 6 chr2 32275758 32276551 -220980032 - L1PA13 LINE L1 0 6163 5363 8399 147 18 17 chr2 32276551 32276924 -220979659 + L1MA2 LINE L1 4968 5339 -2384 12728 150 32 2 chr2 32276924 32279993 -220976590 + L1PA11 LINE L1 3060 6165 -9 8399 147 18 17 chr2 32279993 32282362 -220974221 + L1MA2 LINE L1 5339 7714 -9 690 231 60 112 chr2 32282362 32282709 -220973874 - MER77 LTR ERV1 -113 492 164 895 188 6 0 chr2 32282715 32282875 -220973708 - MLT1C LTR MaLR -2 465 305 439 224 135 26 chr2 32282893 32283049 -220973534 + L1M4 LINE L1 1145 1317 -5099 1110 287 92 39 chr2 32283123 32283704 -220972879 + L1M4 LINE L1 1262 1811 -4796 1533 192 50 33 chr2 32283704 32284063 -220972520 + MLT1A1 LTR MaLR 1 365 0 1110 287 92 39 chr2 32284063 32284389 -220972194 + L1M4 LINE L1 1811 2405 -4202 3603 214 86 18 chr2 32284398 32284772 -220971811 + L1M4 LINE L1 4458 4805 -1621 1358 253 30 24 chr2 32284772 32285143 -220971440 + MLT1A2 LTR MaLR 2 374 0 3603 214 86 18 chr2 32285143 32285847 -220970736 + L1M4 LINE L1 4805 5610 -816 4241 178 51 12 chr2 32285847 32286753 -220969830 + L1MA7 LINE L1 3387 4327 -1819 2230 112 0 10 chr2 32286755 32287067 -220969516 + AluSx SINE Alu 2 310 -2 703 278 151 0 chr2 32287067 32287279 -220969304 + MLT1G1 LTR MaLR 352 595 0 2002 199 72 33 chr2 32287282 32287924 -220968659 + L1ME2 LINE L1 5150 5819 -345 1855 167 3 19 chr2 32287924 32288241 -220968342 + AluSx SINE Alu 1 312 0 2002 199 72 33 chr2 32288241 32288272 -220968311 + L1ME2 LINE L1 5819 5847 -317 * 5279 174 16 7 chr2 32288261 32289601 -220966982 + L1MA7 LINE L1 4299 5650 -662 2136 140 28 8 chr2 32289601 32289958 -220966625 - THE1B LTR MaLR 0 364 1 5466 123 5 1 chr2 32289958 32290729 -220965854 - THE1B-int LTR MaLR 0 1580 807 2165 136 32 46 chr2 32290732 32291101 -220965482 + THE1B LTR MaLR 1 364 0 7510 165 50 65 chr2 32291103 32292778 -220963805 + THE1B-int LTR MaLR 3 1651 0 2171 128 36 28 chr2 32292781 32293140 -220963443 + THE1B LTR MaLR 3 364 0 4978 130 58 1 chr2 32293140 32293900 -220962683 - THE1B-int LTR MaLR -772 808 6 2197 152 22 0 chr2 32293905 32294261 -220962322 - THE1B LTR MaLR 0 364 1 3089 175 20 17 chr2 32294262 32294901 -220961682 + L1MA7 LINE L1 5647 6287 -4 1948 172 15 0 chr2 32294918 32295244 -220961339 + L1M4 LINE L1 5600 5930 -534 * 3897 112 5 1 chr2 32295236 32296031 -220960552 - L1P4 LINE L1 -381 5787 4990 2703 131 5 5 chr2 32296030 32296459 -220960124 + L1P LINE L1 3906 4334 -1812 * 553 93 27 0 chr2 32296467 32296542 -220960041 + Tigger1 DNA MER2_type 2341 2417 -1 28 0 0 0 chr2 32296725 32296753 -220959830 + AT_rich Low_complexity Low_complexity 1 28 0 331 113 0 16 chr2 32296753 32296815 -220959768 + L1MD2 LINE L1 6296 6356 -3 220 113 38 62 chr2 32296844 32296924 -220959659 + (TATAA)n Simple_repeat Simple_repeat 4 81 0 2646 201 39 15 chr2 32296953 32297540 -220959043 - L1MD1 LINE L1 0 6242 5642 276 30 0 0 chr2 32297544 32297577 -220959006 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1575 174 0 39 chr2 32297579 32297860 -220958723 - AluJo SINE Alu -31 281 12 3154 103 17 4 chr2 32297889 32298353 -220958230 - L1PA11 LINE L1 -2 6172 5703 7023 119 28 7 chr2 32298353 32299380 -220957203 - HSMAR1 DNA Mariner -232 1055 7 753 223 0 11 chr2 32299381 32299556 -220957027 - L1P3 LINE L1 -5003 1458 1286 8299 217 132 5 chr2 32299565 32300022 -220956561 - L1P LINE L1 -2028 4118 3720 1578 96 44 4 chr2 32300022 32300272 -220956311 - L1MA2 LINE L1 0 6304 6045 8299 217 132 5 chr2 32300272 32300297 -220956286 - L1P LINE L1 -2426 3720 3700 15754 69 3 1 chr2 32300297 32303143 -220953440 - L1PA6 LINE L1 -5 6149 3296 8299 217 132 5 chr2 32303143 32303362 -220953221 - L1P LINE L1 -2446 3700 3510 216 0 0 0 chr2 32303362 32303386 -220953197 + (TG)n Simple_repeat Simple_repeat 2 25 0 8299 217 132 5 chr2 32303386 32304910 -220951673 - L1P LINE L1 -2636 3510 1609 1601 93 98 0 chr2 32305082 32305307 -220951276 + LTR17 LTR ERV1 534 780 0 5624 75 0 17 chr2 32305307 32306026 -220950557 + HERV17 LTR ERV1 1 707 -7919 9544 72 9 12 chr2 32306179 32307465 -220949118 + HERV17 LTR ERV1 732 2014 -6612 * 10766 57 2 1 chr2 32307450 32308774 -220947809 + HERV17 LTR ERV1 2430 3754 -4872 5001 49 5 2 chr2 32308753 32309366 -220947217 + HERV17 LTR ERV1 5405 6019 -2607 * 2342 62 3 0 chr2 32309384 32309675 -220946908 + HERV17 LTR ERV1 8335 8626 0 2336 59 0 98 chr2 32309679 32309830 -220946753 + LTR17 LTR ERV1 5 103 -677 428 19 0 0 chr2 32309830 32309882 -220946701 + L1PA6 LINE L1 6098 6149 -5 2336 59 0 98 chr2 32309882 32310087 -220946496 + LTR17 LTR ERV1 103 326 -454 797 281 37 39 chr2 32310088 32310469 -220946114 + L1ME2 LINE L1 1022 1401 -5025 357 183 10 7 chr2 32310494 32310592 -220945991 - L1MB3 LINE L1 0 6180 6086 6317 197 43 87 chr2 32310597 32313279 -220943304 - L1MA4 LINE L1 -280 6202 3403 924 237 82 109 chr2 32313279 32313706 -220942877 + MER66A LTR ERV1 93 468 -10 6317 197 43 87 chr2 32313706 32317132 -220939451 - L1MA4 LINE L1 -3079 3403 5 724 291 93 0 chr2 32317153 32317455 -220939128 + L1ME2 LINE L1 1639 1968 -4639 755 224 18 14 chr2 32317484 32317703 -220938880 + L1ME2 LINE L1 4009 4228 -2198 1883 231 30 8 chr2 32317723 32318256 -220938327 + L1ME2 LINE L1 4809 5353 -1073 1760 226 41 37 chr2 32318266 32319113 -220937470 + L1ME2 LINE L1 5516 6434 -10 1978 225 85 52 chr2 32319134 32320326 -220936257 + L1MC4 LINE L1 6374 7700 -342 1613 145 128 0 chr2 32320326 32320622 -220935961 - MER1B DNA MER1_type -3 334 1 1978 225 85 52 chr2 32320622 32320829 -220935754 + L1MC4 LINE L1 7700 7899 -143 1731 72 72 11 chr2 32321114 32321378 -220935205 + L1MA1 LINE L1 6023 6302 0 261 250 77 29 chr2 32321564 32321668 -220934915 + MIR SINE MIR 154 262 0 231 36 0 0 chr2 32322094 32322122 -220934461 + (CA)n Simple_repeat Simple_repeat 1 28 0 890 291 77 24 chr2 32322281 32322618 -220933965 - MLT1J LTR MaLR -154 357 3 240 35 0 0 chr2 32322752 32322781 -220933802 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1886 157 7 0 chr2 32322793 32323099 -220933484 + AluSx SINE Alu 1 308 0 499 211 0 0 chr2 32323203 32323293 -220933290 - MER5A DNA MER1_type -84 105 16 677 298 145 31 chr2 32323583 32324039 -220932544 - L1MC4a LINE L1 -94 6027 5520 22 0 0 0 chr2 32325372 32325394 -220931189 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr2 32325478 32325504 -220931079 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr2 32326606 32326640 -220929943 + AT_rich Low_complexity Low_complexity 1 34 0 1656 166 53 0 chr2 32327900 32328184 -220928399 - AluJb SINE Alu -13 299 1 228 214 48 87 chr2 32328439 32328542 -220928041 + HAL1 LINE L1 980 1078 -1429 857 229 147 50 chr2 32328800 32329201 -220927382 + LTR50 LTR ERVL 100 539 -256 485 292 52 21 chr2 32329217 32329409 -220927174 + LTR50 LTR ERVL 475 672 -123 2308 91 3 0 chr2 32329590 32329887 -220926696 - AluSq SINE Alu -15 298 1 29 28 0 0 chr2 32330539 32330575 -220926008 + AT_rich Low_complexity Low_complexity 1 36 0 2211 118 3 6 chr2 32331015 32331329 -220925254 - AluSq SINE Alu 0 313 1 463 299 15 8 chr2 32332199 32332333 -220924250 + L2 LINE L2 2004 2138 -1176 838 236 66 43 chr2 32332337 32332742 -220923841 + MLT1A1 LTR MaLR 10 362 -3 1917 218 31 56 chr2 32332745 32333264 -220923319 + L1MC3 LINE L1 7279 7784 -1 703 201 67 12 chr2 32333323 32333487 -220923096 - FRAM SINE Alu -7 169 1 7842 193 35 4 chr2 32334014 32335757 -220920826 + L1P LINE L1 2840 4636 -1510 514 261 85 46 chr2 32335781 32336041 -220920542 - L1MEc LINE L1 -5141 1255 986 1342 237 5 58 chr2 32336101 32336380 -220920203 + L1MC1 LINE L1 5409 5658 -2150 1580 121 12 8 chr2 32336380 32336628 -220919955 + L1MC1 LINE L1 6071 6319 -14 1342 237 5 58 chr2 32336628 32336783 -220919800 + L1MC1 LINE L1 5658 5820 -1988 678 218 29 12 chr2 32336783 32336953 -220919630 - HERVL40 LTR ERVL -2142 3388 3216 1353 240 49 17 chr2 32336959 32337309 -220919274 - HERVL40 LTR ERVL -2477 3053 2693 922 192 47 19 chr2 32337309 32337523 -220919060 - LTR40a LTR ERVL -293 226 7 624 268 95 30 chr2 32337528 32338184 -220918399 - L1ME LINE L1 -4940 1321 581 1636 190 52 3 chr2 32338245 32338534 -220918049 - AluJb SINE Alu -9 303 1 1119 213 126 41 chr2 32338926 32339559 -220917024 + Zaphod DNA AcHobo 284 970 -3061 7064 31 0 0 chr2 32339559 32340397 -220916186 + L1PA4 LINE L1 5318 6155 0 1007 196 60 4 chr2 32340435 32340701 -220915882 + Zaphod DNA AcHobo 3595 3875 -156 1428 215 47 68 chr2 32340719 32341310 -220915273 + MER82 DNA MER2_type 7 653 0 523 203 20 59 chr2 32341310 32341341 -220915242 + MER115 DNA AcHobo 548 579 -114 1709 201 13 0 chr2 32341341 32341649 -220914934 + AluJb SINE Alu 1 312 0 523 203 20 59 chr2 32341649 32341769 -220914814 + MER115 DNA AcHobo 579 693 0 22 35 0 0 chr2 32342710 32342739 -220913844 + AT_rich Low_complexity Low_complexity 1 29 0 2383 89 65 8 chr2 32343306 32343678 -220912905 + MLT2A1 LTR ERVL 1 393 -51 13549 203 33 20 chr2 32345038 32352741 -220903842 - L1PB3 LINE L1 -2 6868 1 352 211 222 0 chr2 32352913 32353003 -220903580 + MIR3 SINE MIR 50 159 -49 3627 132 10 28 chr2 32353073 32354028 -220902555 + L1MA8 LINE L1 4738 5686 -605 * 33311 99 25 8 chr2 32354027 32357763 -220898820 - L1PA6 LINE L1 -5 6149 2274 210 37 0 0 chr2 32357763 32357790 -220898793 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 33311 99 25 8 chr2 32357790 32360093 -220896490 - L1PA6 LINE L1 -3880 2274 11 3293 147 28 7 chr2 32360101 32360706 -220895877 + L1MA8 LINE L1 5671 6288 -3 21 0 0 0 chr2 32360717 32360738 -220895845 + AT_rich Low_complexity Low_complexity 1 21 0 375 307 98 56 chr2 32361337 32361552 -220895031 - L1MC4 LINE L1 0 8042 7819 312 276 18 25 chr2 32361603 32361766 -220894817 - L1MC5 LINE L1 -296 7665 7504 401 275 50 28 chr2 32361927 32362109 -220894474 - L1MC4 LINE L1 -547 7495 7310 282 317 29 0 chr2 32362222 32362326 -220894257 - L1MC5 LINE L1 -864 7097 6991 809 231 11 0 chr2 32362408 32362629 -220893954 - L1MC4 LINE L1 -856 7002 6730 1444 163 8 0 chr2 32362718 32362975 -220893608 + Tigger2 DNA MER2_type 2460 2718 0 209 108 27 0 chr2 32362999 32363036 -220893547 + (TG)n Simple_repeat Simple_repeat 2 39 0 1789 148 25 22 chr2 32363040 32363399 -220893184 - Tigger6a DNA MER2_type -3 1080 721 1786 184 45 134 chr2 32363404 32364076 -220892507 - LTR9 LTR ERV1 0 612 1 1484 143 2 8 chr2 32364078 32364339 -220892244 - HUERS-P3 LTR ERV1 0 8919 7163 13433 127 3 14 chr2 32364555 32366326 -220890257 - HUERS-P3 LTR ERV1 -2007 6912 5165 2486 33 40 0 chr2 32366326 32366625 -220889958 - AluY SINE Alu 0 311 1 13433 127 3 14 chr2 32366625 32366940 -220889643 - HUERS-P3 LTR ERV1 -3754 5165 4848 * 18636 126 4 7 chr2 32366923 32369749 -220886834 - HUERS-P3 LTR ERV1 -4313 4606 1791 4036 194 53 9 chr2 32369746 32370798 -220885785 - HUERS-P3 LTR ERV1 -7267 1652 473 * 525 244 88 29 chr2 32370826 32371031 -220885552 - LTR19C LTR ERV1 -72 707 491 * 1452 208 7 85 chr2 32371014 32371438 -220885145 - LTR9 LTR ERV1 -221 391 1 2285 174 98 6 chr2 32371449 32371921 -220884662 - Tigger6a DNA MER2_type -568 515 1 2591 269 14 38 chr2 32373431 32373914 -220882669 + L1M3b LINE L1 10 470 -5811 2677 40 0 0 chr2 32373914 32374215 -220882368 - AluY SINE Alu -10 301 1 2591 269 14 38 chr2 32374215 32374501 -220882082 + L1M3b LINE L1 470 761 -5520 * 8819 223 44 26 chr2 32374487 32376951 -220879632 + L1M3b LINE L1 630 3049 -3301 2047 122 3 33 chr2 32376951 32377255 -220879328 + AluSq SINE Alu 1 295 -18 8819 223 44 26 chr2 32377255 32378695 -220877888 + L1M3b LINE L1 3049 4294 -2056 2846 134 9 0 chr2 32378695 32379119 -220877464 + MSTA LTR MaLR 1 428 0 8819 223 44 26 chr2 32379119 32379244 -220877339 + L1M3b LINE L1 4294 4415 -1935 196 258 61 30 chr2 32380228 32380294 -220876289 - L2 LINE L2 -44 3269 3202 405 336 7 7 chr2 32381061 32381198 -220875385 + MIR3 SINE MIR 10 146 -62 410 315 51 17 chr2 32381276 32381454 -220875129 + MIR SINE MIR 57 240 -22 234 311 66 28 chr2 32381666 32381772 -220874811 - MER5A DNA MER1_type -22 167 58 597 266 133 4 chr2 32383215 32383254 -220873329 - LTR16B LTR ERVL -9 455 422 2219 122 0 0 chr2 32383254 32383549 -220873034 + AluSx SINE Alu 1 295 -17 597 266 133 4 chr2 32383549 32383772 -220872811 - LTR16B LTR ERVL -42 422 159 431 240 0 0 chr2 32385574 32385678 -220870905 - L1M4 LINE L1 -1559 4587 4484 414 242 35 46 chr2 32385668 32385869 -220870714 + L1ME3A LINE L1 5669 5866 -304 * 20260 153 31 14 chr2 32386663 32387067 -220869516 + L1M1 LINE L1 16 411 -7154 2128 23 27 8 chr2 32387067 32387328 -220869255 - L1PA5 LINE L1 0 6154 5889 20260 153 31 14 chr2 32387328 32390348 -220866235 + L1M1 LINE L1 411 3523 -4042 405 0 0 0 chr2 32390348 32390393 -220866190 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 20260 153 31 14 chr2 32390393 32390917 -220865666 + L1M1 LINE L1 3523 4036 -3529 8541 189 19 20 chr2 32390919 32392314 -220864269 + L1 LINE L1 3790 5186 -2379 2187 83 0 10 chr2 32392314 32392602 -220863981 + AluY SINE Alu 26 310 -1 8541 189 19 20 chr2 32392602 32393162 -220863421 + L1 LINE L1 5186 5745 -1820 1693 166 0 28 chr2 32393162 32393479 -220863104 + AluJb SINE Alu 1 309 0 8541 189 19 20 chr2 32393479 32393519 -220863064 + L1 LINE L1 5745 5784 -1781 21310 164 21 18 chr2 32393523 32399772 -220856811 + L1PA8 LINE L1 1 7606 -4 270 160 40 0 chr2 32399773 32399823 -220856760 + LTR8 LTR ERV1 533 584 -107 27 73 0 0 chr2 32399823 32399878 -220856705 + AT_rich Low_complexity Low_complexity 1 55 0 189 171 0 0 chr2 32400787 32400822 -220855761 + A-rich Low_complexity Low_complexity 1 35 0 2179 84 7 29 chr2 32400900 32401208 -220855375 + AluY SINE Alu 1 301 -10 363 229 57 0 chr2 32401209 32401331 -220855252 + L1ME4a LINE L1 5756 5884 -237 417 247 13 26 chr2 32401375 32401529 -220855054 + L1MC5 LINE L1 7762 7913 -48 1958 138 24 6 chr2 32401531 32401865 -220854718 + L1PA16 LINE L1 5818 6157 -9 545 261 11 43 chr2 32402298 32402482 -220854101 - MER5B DNA MER1_type 0 178 1 580 206 7 85 chr2 32402501 32402642 -220853941 - MER5B DNA MER1_type 0 178 49 1284 159 58 11 chr2 32402991 32403267 -220853316 + L1MB3 LINE L1 5892 6180 -3 385 311 33 32 chr2 32403800 32403966 -220852617 - MER5A DNA MER1_type 0 189 12 8861 195 55 40 chr2 32404146 32404815 -220851768 + L1M1 LINE L1 16 673 -6892 396 0 0 0 chr2 32404815 32404859 -220851724 + (CAGTG)n Simple_repeat Simple_repeat 3 46 0 8861 195 55 40 chr2 32404859 32405279 -220851304 + L1M1 LINE L1 673 1085 -6480 2067 139 30 38 chr2 32405279 32405646 -220850937 - THE1B LTR MaLR 0 364 1 8861 195 55 40 chr2 32405646 32407451 -220849132 + L1M1 LINE L1 1085 3634 -3931 710 163 30 22 chr2 32407454 32407589 -220848994 + FLAM_C SINE Alu 8 143 0 411 87 22 33 chr2 32407594 32407686 -220848897 + (TA)n Simple_repeat Simple_repeat 2 92 0 5065 197 45 14 chr2 32407686 32409016 -220847567 + L1M1 LINE L1 3628 4999 -2566 1325 121 13 16 chr2 32409028 32409321 -220847262 + L1MA4 LINE L1 5202 5493 -743 3482 30 0 0 chr2 32409321 32409749 -220846834 + L1PA5 LINE L1 5734 6164 0 4874 133 12 2 chr2 32409765 32410567 -220846016 + L1MA4 LINE L1 5485 6294 -6 590 193 207 7 chr2 32410606 32410751 -220845832 + MER5A DNA MER1_type 16 189 0 190 240 20 100 chr2 32410758 32410858 -220845725 - MER5A DNA MER1_type -1 188 97 595 311 70 20 chr2 32411496 32411740 -220844843 - MIR SINE MIR -5 257 2 757 256 51 19 chr2 32413130 32413345 -220843238 + MIR SINE MIR 7 228 -34 183 346 0 0 chr2 32413458 32413510 -220843073 - MER5A DNA MER1_type -115 74 23 405 0 0 0 chr2 32413805 32413850 -220842733 + (CA)n Simple_repeat Simple_repeat 2 46 0 566 250 22 17 chr2 32414610 32414778 -220841805 + MIR SINE MIR 5 176 -32 587 290 157 69 chr2 32415363 32415842 -220840741 - LTR33 LTR ERVL 0 521 1 648 322 83 33 chr2 32415957 32416091 -220840492 - ERVL LTR ERVL -2323 3331 3205 24869 45 4 0 chr2 32416091 32419982 -220836601 - L1PA5 LINE L1 -1 6153 2250 648 322 83 33 chr2 32419982 32420572 -220836011 - ERVL LTR ERVL -2449 3205 2506 827 322 45 20 chr2 32420609 32420767 -220835816 - ERVL LTR ERVL -3424 2269 2116 2046 201 65 92 chr2 32420767 32421410 -220835173 + MLT1E2 LTR MaLR 1 626 0 827 322 45 20 chr2 32421410 32421708 -220834875 - ERVL LTR ERVL -3577 2116 1744 881 124 20 13 chr2 32421807 32421960 -220834623 - MLT1D LTR MaLR 0 505 352 268 286 48 0 chr2 32422208 32422334 -220834249 - ERVL LTR ERVL -5061 593 462 1285 70 0 0 chr2 32422426 32422609 -220833974 - AluY SINE Alu 0 313 131 216 0 0 0 chr2 32422611 32422635 -220833948 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2004 61 0 4 chr2 32422635 32422881 -220833702 - AluY SINE Alu -28 283 39 396 0 0 0 chr2 32423852 32423896 -220832687 + (TG)n Simple_repeat Simple_repeat 2 45 0 335 315 63 8 chr2 32423955 32424082 -220832501 + MLT1I LTR MaLR 36 169 -240 232 200 43 0 chr2 32424212 32424282 -220832301 + MLT1J1 LTR MaLR 347 419 -27 1201 87 6 0 chr2 32424282 32424455 -220832128 + L1MA2 LINE L1 5437 5610 -695 * 11934 88 3 1 chr2 32424453 32426149 -220830434 + L1PA5 LINE L1 1 1701 -4440 19710 40 5 0 chr2 32426149 32429403 -220827180 + L1PA5 LINE L1 2902 6153 -1 584 122 139 0 chr2 32429403 32429518 -220827065 + L1PB4 LINE L1 6025 6155 -1 * 2780 125 11 2 chr2 32429512 32429967 -220826616 + L1MA2 LINE L1 5593 6051 -253 10193 141 16 27 chr2 32429981 32432786 -220823797 + L1P3 LINE L1 6 2801 -3660 5642 110 15 16 chr2 32432785 32433716 -220822867 - L1P LINE L1 -3043 3103 2174 * 1943 116 29 3 chr2 32433715 32434025 -220822558 + MSTA-int LTR MaLR 1334 1651 0 * 1990 144 160 5 chr2 32434025 32434393 -220822190 + MSTA LTR MaLR 1 425 -3 186 348 28 43 chr2 32434421 32434562 -220822021 - L2 LINE L2 -303 2969 2831 2416 97 35 0 chr2 32434609 32434979 -220821604 + L1MA2 LINE L1 5919 6301 -3 216 260 39 26 chr2 32435338 32435415 -220821168 - MIR3 SINE MIR -13 195 118 237 188 29 0 chr2 32435997 32436066 -220820517 - MER69 DNA AcHobo -58 2468 2398 684 206 23 0 chr2 32436068 32436199 -220820384 + FLAM_C SINE Alu 1 134 -9 734 250 56 51 chr2 32436276 32436697 -220819886 - L1MEc LINE L1 -3714 2523 2120 430 261 9 0 chr2 32436793 32436908 -220819675 - L1M4 LINE L1 -1981 4165 4050 2138 108 7 24 chr2 32437016 32437313 -220819270 - AluSx SINE Alu -20 292 1 911 200 19 29 chr2 32437581 32437786 -220818797 - MLT1A2 LTR MaLR 0 374 172 * 1764 133 7 7 chr2 32437776 32438055 -220818528 + MSTA LTR MaLR 150 428 0 359 132 0 110 chr2 32438056 32438147 -220818436 - MLT1A2 LTR MaLR -293 81 1 982 232 61 67 chr2 32438723 32439248 -220817335 + L1MC5 LINE L1 7173 7694 -267 298 226 21 21 chr2 32439260 32439353 -220817230 + (TA)n Simple_repeat Simple_repeat 2 94 0 331 303 121 0 chr2 32439465 32439597 -220816986 - L2 LINE L2 -639 2675 2528 406 277 15 46 chr2 32440876 32441006 -220815577 - MIR SINE MIR -70 192 67 750 260 41 58 chr2 32441553 32441795 -220814788 + MIR SINE MIR 20 257 -5 2369 106 0 0 chr2 32442683 32442984 -220813599 + AluSx SINE Alu 4 304 -8 192 152 0 0 chr2 32443137 32443170 -220813413 + C-rich Low_complexity Low_complexity 6 38 0 542 195 176 34 chr2 32443193 32443460 -220813123 - MER69 DNA AcHobo -13 2513 2209 606 180 0 0 chr2 32443545 32443667 -220812916 + LTR37A LTR ERV1 301 422 -4 534 171 189 0 chr2 32444006 32444117 -220812466 - FLAM_A SINE Alu -1 132 1 1956 138 3 0 chr2 32444541 32444823 -220811760 + AluSx SINE Alu 28 310 -2 709 231 25 66 chr2 32444949 32445191 -220811392 + MER31-int LTR ERV1 3852 4083 -853 2138 109 34 0 chr2 32445191 32445484 -220811099 + AluSq SINE Alu 1 303 -10 421 231 116 0 chr2 32445781 32445928 -220810655 + LTR37A LTR ERV1 38 201 -225 335 325 34 12 chr2 32445971 32446291 -220810292 - L1M4 LINE L1 -1451 4695 4369 21 71 0 0 chr2 32446533 32446575 -220810008 + AT_rich Low_complexity Low_complexity 1 42 0 689 173 0 9 chr2 32446695 32446870 -220809713 - MER89 LTR ERV1 0 559 334 389 200 129 86 chr2 32446858 32446998 -220809585 - MLT1C LTR MaLR -321 146 1 * 364 200 32 0 chr2 32446999 32447094 -220809489 + L1MB8 LINE L1 6079 6176 -2 198 71 0 0 chr2 32447505 32447533 -220809050 + (CTA)n Simple_repeat Simple_repeat 1 28 0 1049 218 32 9 chr2 32448251 32448591 -220807992 + L1MEc LINE L1 2047 2394 -4002 24 53 0 0 chr2 32448598 32448636 -220807947 + AT_rich Low_complexity Low_complexity 1 38 0 2153 157 3 3 chr2 32448651 32449008 -220807575 - MLT2C1 LTR ERVL -40 357 1 4244 237 49 22 chr2 32449019 32449534 -220807049 + L1MEc LINE L1 2374 2873 -3342 1960 162 0 7 chr2 32449534 32449837 -220806746 + AluJb SINE Alu 1 301 -11 4244 237 49 22 chr2 32449837 32450843 -220805740 + L1MEc LINE L1 2873 3937 -2278 1996 175 37 30 chr2 32450844 32451392 -220805191 + MLT2A2 LTR ERVL 1 554 0 2799 208 77 32 chr2 32451402 32452320 -220804263 + L1MEc LINE L1 3944 4903 -1312 961 252 189 45 chr2 32452375 32452799 -220803784 + L2 LINE L2 2824 3308 -5 230 270 87 35 chr2 32452857 32452972 -220803611 - L2 LINE L2 -9 3304 3184 1682 129 13 41 chr2 32453139 32453456 -220803127 + L1MCa LINE L1 37 344 -6082 7808 187 26 22 chr2 32453460 32455069 -220801514 + L1PA13 LINE L1 1 1615 -5172 1553 143 0 0 chr2 32455069 32455342 -220801241 + L1P LINE L1 4623 4895 -1251 * 17701 175 15 17 chr2 32455340 32455699 -220800884 + L1PA13 LINE L1 2122 2480 -4334 2290 122 0 0 chr2 32455699 32456010 -220800573 + AluSx SINE Alu 1 311 -1 17701 175 15 17 chr2 32456010 32459009 -220797574 + L1PA13 LINE L1 2480 5482 -1332 4643 171 51 46 chr2 32459009 32460075 -220796508 + MER11C LTR ERVK 1 1071 0 17701 175 15 17 chr2 32460075 32460551 -220796032 + L1PA13 LINE L1 5482 5957 -857 1886 174 0 3 chr2 32460551 32460856 -220795727 + AluJb SINE Alu 1 304 -8 17701 175 15 17 chr2 32460856 32461698 -220794885 + L1PA13 LINE L1 5957 6803 -11 886 190 150 46 chr2 32461744 32461980 -220794603 + MER21B LTR ERV1 23 271 -475 823 276 40 12 chr2 32461970 32462220 -220794363 + MER21B LTR ERV1 493 749 -114 * 237 241 0 0 chr2 32462297 32462355 -220794228 + L1MCa LINE L1 360 417 -6009 695 190 0 0 chr2 32462634 32462755 -220793828 + Tigger5 DNA MER2_type 2200 2320 -3 3254 211 27 8 chr2 32462764 32464087 -220792496 + L1MCa LINE L1 2057 3406 -3020 651 117 0 0 chr2 32464087 32464190 -220792393 + (GGAA)n Simple_repeat Simple_repeat 1 103 0 648 293 105 38 chr2 32464474 32464894 -220791689 - MLT1J2 LTR MaLR 0 450 3 900 172 17 0 chr2 32465171 32465345 -220791238 + L1MD3 LINE L1 7501 7677 -318 5673 153 5 20 chr2 32465346 32466156 -220790427 + L1MA8 LINE L1 4217 5037 -1275 1947 163 7 0 chr2 32466156 32466456 -220790127 + AluSx SINE Alu 1 302 -10 5673 153 5 20 chr2 32466456 32466911 -220789672 + L1MA8 LINE L1 5037 5945 -367 612 158 18 35 chr2 32466914 32467028 -220789555 + FLAM_C SINE Alu 7 118 -25 4524 98 30 6 chr2 32467037 32467750 -220788833 + L1MA2 LINE L1 5428 6157 -147 309 114 0 0 chr2 32467751 32467795 -220788788 + Alu SINE Alu 1 44 -256 1345 146 5 27 chr2 32467795 32467999 -220788584 + AluSg/x SINE Alu 91 291 -19 835 124 78 0 chr2 32467999 32468152 -220788431 + L1MA3 LINE L1 6139 6303 -2 1345 146 5 27 chr2 32468152 32468166 -220788417 + AluSg/x SINE Alu 291 304 -6 1045 163 143 4 chr2 32468258 32468510 -220788073 + L1MA8 LINE L1 5937 6223 -68 972 126 7 13 chr2 32468738 32468921 -220787662 - AluJb SINE Alu 0 315 134 435 253 98 37 chr2 32469709 32470055 -220786528 - MLT1J2 LTR MaLR -13 396 30 339 230 50 10 chr2 32470497 32470597 -220785986 - MLT1G1 LTR MaLR 0 595 492 * 1831 225 22 5 chr2 32470595 32470995 -220785588 + MER45B DNA AcHobo 240 646 -394 1954 100 74 0 chr2 32470995 32471265 -220785318 + AluSg SINE Alu 1 290 -20 39224 60 8 1 chr2 32471266 32477355 -220779228 + L1PA5 LINE L1 12 6141 -13 186 43 0 0 chr2 32477358 32477381 -220779202 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 2080 122 3 29 chr2 32477394 32477706 -220778877 + AluSx SINE Alu 1 304 -8 1673 198 23 8 chr2 32477706 32478101 -220778482 + MER45B DNA AcHobo 639 1039 -1 416 277 185 15 chr2 32478293 32478488 -220778095 + L2 LINE L2 3086 3313 0 815 233 136 64 chr2 32478494 32478854 -220777729 + MLT1L LTR MaLR 172 557 -58 2033 100 26 26 chr2 32478934 32479243 -220777340 + AluSx SINE Alu 1 309 -3 1685 113 52 0 chr2 32479243 32479472 -220777111 + AluSx SINE Alu 1 241 -71 3338 112 159 133 chr2 32479472 32480777 -220775806 + pTR5 LTR ERV1 750 2407 -31 246 125 62 62 chr2 32480777 32480857 -220775726 + Alu SINE Alu 221 300 0 686 203 61 7 chr2 32481260 32481408 -220775175 + MLT1C LTR MaLR 305 460 -7 840 206 0 0 chr2 32481647 32481982 -220774601 + (TG)n Simple_repeat Simple_repeat 1 335 0 22 0 0 0 chr2 32482289 32482311 -220774272 + AT_rich Low_complexity Low_complexity 1 22 0 362 251 73 26 chr2 32482391 32482582 -220774001 - L1MC4a LINE L1 -1818 5990 5791 371 260 84 24 chr2 32482672 32483053 -220773530 - L1MC4a LINE L1 -864 5282 4827 4315 49 0 2 chr2 32483055 32483587 -220772996 + L1PA5 LINE L1 5621 6151 -3 4424 197 56 35 chr2 32483769 32484981 -220771602 - L1MC4a LINE L1 -1326 4820 3584 915 162 0 0 chr2 32485110 32485246 -220771337 + AluSq/x SINE Alu 1 136 -176 1777 118 10 78 chr2 32485246 32485586 -220770997 + AluSx SINE Alu 1 319 0 311 301 43 0 chr2 32485984 32486077 -220770506 - MIR SINE MIR -54 208 112 644 224 149 6 chr2 32486085 32486246 -220770337 + MER5A DNA MER1_type 4 187 -2 2054 108 13 33 chr2 32486824 32487131 -220769452 + AluSq SINE Alu 1 301 -12 383 273 120 53 chr2 32487860 32488010 -220768573 + MIR SINE MIR 75 234 -28 294 282 147 12 chr2 32488609 32488772 -220767811 - MIR SINE MIR -31 231 47 2589 197 81 82 chr2 32488962 32489789 -220766794 - LTR1B LTR ERV1 0 826 1 2322 104 0 7 chr2 32490372 32490681 -220765902 - AluSc SINE Alu -2 307 1 2080 128 3 0 chr2 32491709 32491999 -220764584 + AluSp SINE Alu 1 291 -22 219 111 44 0 chr2 32491999 32492044 -220764539 + (TA)n Simple_repeat Simple_repeat 2 48 0 184 326 153 7 chr2 32492277 32492421 -220764162 + L2 LINE L2 1955 2119 -1195 214 304 0 14 chr2 32492549 32492618 -220763965 + GA-rich Low_complexity Low_complexity 2 69 0 198 301 60 0 chr2 32492621 32492704 -220763879 + L2 LINE L2 2230 2317 -997 1255 224 30 92 chr2 32492749 32493306 -220763277 - L1ME1 LINE L1 -4 6162 5640 4774 151 16 4 chr2 32493320 32494503 -220762080 - L1MA2 LINE L1 -216 6088 4920 2254 159 28 39 chr2 32494503 32494544 -220762039 - MSTA LTR MaLR 0 428 388 2441 94 0 0 chr2 32494544 32494851 -220761732 + AluSc SINE Alu 1 307 -2 2476 88 0 0 chr2 32494851 32495158 -220761425 + AluY SINE Alu 1 307 -4 2254 159 28 39 chr2 32495158 32495548 -220761035 - MSTA LTR MaLR -38 390 1 5689 173 38 6 chr2 32495548 32496616 -220759967 - MSTA-int LTR MaLR 0 1651 550 4774 151 16 4 chr2 32495548 32495559 -220761024 - L1MA2 LINE L1 -1384 4920 4882 * 549 98 11 11 chr2 32496604 32496696 -220759887 - MSTA-int LTR MaLR -1559 92 1 1811 154 31 9 chr2 32496696 32497021 -220759562 - MSTA LTR MaLR 0 428 97 2752 166 34 0 chr2 32497021 32497557 -220759026 - L1MA2 LINE L1 -2094 4052 3499 2340 112 48 11 chr2 32497557 32497931 -220758652 - L1PA11 LINE L1 0 6174 5787 2408 186 9 4 chr2 32497932 32498460 -220758123 - L1 LINE L1 -2499 5066 4536 1900 219 32 9 chr2 32499768 32500230 -220756353 - L1 LINE L1 -3302 4263 3791 7586 26 14 0 chr2 32500230 32501274 -220755309 - L1PA4 LINE L1 -5 6150 5103 7184 33 1 0 chr2 32501274 32502177 -220754406 + L1PA4 LINE L1 4194 5097 -1049 * 10053 177 108 9 chr2 32502167 32502832 -220753751 - L1 LINE L1 -3757 3808 3210 2410 85 0 7 chr2 32502832 32503138 -220753445 + AluY SINE Alu 1 304 -7 10053 177 108 9 chr2 32503138 32505925 -220750658 - L1 LINE L1 -4355 3210 25 3597 192 41 44 chr2 32505930 32506424 -220750159 - L1ME LINE L1 -562 5604 5110 2033 142 7 0 chr2 32506424 32506713 -220749870 - AluSx SINE Alu -21 291 1 3597 192 41 44 chr2 32506713 32507489 -220749094 - L1ME LINE L1 -1056 5110 4323 22 0 0 0 chr2 32507526 32507548 -220749035 + AT_rich Low_complexity Low_complexity 1 22 0 781 203 112 16 chr2 32507697 32507993 -220748590 - MSTD LTR MaLR 0 396 3 907 166 13 7 chr2 32508697 32508848 -220747735 - FRAM SINE Alu -25 151 1 659 167 0 9 chr2 32509191 32509299 -220747284 + AluJo SINE Alu 87 193 -119 393 75 0 0 chr2 32509299 32509352 -220747231 + (GA)n Simple_repeat Simple_repeat 2 54 0 302 263 76 0 chr2 32509355 32509473 -220747110 - MIR3 SINE MIR -75 133 7 308 233 0 14 chr2 32509480 32509553 -220747030 + MER112 DNA MER1_type 1 72 -188 252 0 0 0 chr2 32509556 32509584 -220746999 + (CA)n Simple_repeat Simple_repeat 1 28 0 739 196 143 0 chr2 32509651 32509840 -220746743 - MIR SINE MIR -46 216 1 6861 64 35 0 chr2 32510311 32511232 -220745351 - L1PA7 LINE L1 -2 6152 5227 25 90 0 0 chr2 32511397 32511464 -220745119 + AT_rich Low_complexity Low_complexity 1 67 0 2115 136 23 6 chr2 32511636 32511989 -220744594 - MER46B DNA MER2_type -1 235 2 2134 134 13 19 chr2 32512401 32512714 -220743869 + AluSx SINE Alu 1 311 -1 199 211 0 0 chr2 32513033 32513071 -220743512 - MIR SINE MIR -176 86 49 2429 106 3 0 chr2 32513469 32513781 -220742802 - AluSp SINE Alu 0 313 1 486 308 93 30 chr2 32513814 32514051 -220742532 - MIR SINE MIR 0 262 11 2154 126 7 7 chr2 32514180 32514490 -220742093 + AluSx SINE Alu 3 312 0 2443 67 6 22 chr2 32514804 32515119 -220741464 - AluY SINE Alu -1 310 1 2003 148 13 0 chr2 32515403 32515701 -220740882 - AluSx SINE Alu -10 302 1 1998 127 58 0 chr2 32515961 32516252 -220740331 + AluSx SINE Alu 1 308 -4 2330 104 0 0 chr2 32516276 32516575 -220740008 - AluY SINE Alu -12 299 1 251 270 32 0 chr2 32516760 32516823 -220739760 - MIR SINE MIR -108 154 90 282 264 114 29 chr2 32517381 32517521 -220739062 - MER5B DNA MER1_type 0 178 27 245 333 65 9 chr2 32517428 32517536 -220739047 + MER5A DNA MER1_type 70 183 -6 * 3149 37 0 3 chr2 32517923 32518301 -220738282 - L1PA3 LINE L1 0 6155 5779 2630 10 0 0 chr2 32518301 32518608 -220737975 + L1PA3 LINE L1 5470 5776 -379 191 197 30 91 chr2 32519246 32519312 -220737271 - MIR3 SINE MIR -23 185 124 2707 67 11 0 chr2 32519317 32519674 -220736909 + L1PA7 LINE L1 5793 6153 -1 426 276 149 38 chr2 32519863 32520124 -220736459 - L1ME4a LINE L1 0 6121 5832 778 207 61 0 chr2 32520448 32520612 -220735971 + FRAM SINE Alu 1 174 -2 238 295 78 72 chr2 32520649 32520842 -220735741 - L3 LINE CR1 -576 1001 808 2086 220 129 10 chr2 32521245 32522024 -220734559 - L1ME1 LINE L1 -5 6230 5198 2142 123 10 0 chr2 32522024 32522325 -220734258 - AluSx SINE Alu -8 304 1 2086 220 129 10 chr2 32522325 32522512 -220734071 - L1ME1 LINE L1 -1037 5198 5035 1858 133 10 31 chr2 32522860 32523153 -220733430 + AluSx SINE Alu 1 287 -25 518 259 19 12 chr2 32523204 32523366 -220733217 - L1ME1 LINE L1 -1198 5017 4855 823 218 0 0 chr2 32523367 32523514 -220733069 - FRAM SINE Alu -13 163 17 429 201 126 88 chr2 32523533 32523630 -220732953 - L1ME1 LINE L1 -1352 4863 4771 1559 181 0 83 chr2 32523630 32523968 -220732615 + AluJo SINE Alu 1 310 -2 429 201 126 88 chr2 32523968 32524164 -220732419 - L1ME1 LINE L1 -1444 4771 4559 340 277 0 0 chr2 32524162 32524245 -220732338 - L1ME1 LINE L1 -2099 4116 4034 * 1141 246 161 24 chr2 32524238 32524909 -220731674 - L1ME1 LINE L1 -2421 3794 3032 1995 117 57 0 chr2 32524964 32525247 -220731336 + AluSx SINE Alu 1 299 -13 1438 191 50 0 chr2 32525259 32525521 -220731062 + AluJo SINE Alu 1 275 -37 1186 255 91 15 chr2 32525577 32526248 -220730335 - L1ME1 LINE L1 -3316 2899 2140 2201 60 57 7 chr2 32526271 32526552 -220730031 + AluSp SINE Alu 1 295 -18 1276 106 0 0 chr2 32526637 32526798 -220729785 + AluSc SINE Alu 1 161 -148 21 36 0 0 chr2 32527500 32527528 -220729055 + AT_rich Low_complexity Low_complexity 1 28 0 1690 132 60 0 chr2 32527659 32527925 -220728658 - AluSx SINE Alu -30 282 1 248 323 32 21 chr2 32528572 32528665 -220727918 + MIR SINE MIR 22 115 -147 226 184 112 31 chr2 32528670 32528768 -220727815 - L1M4 LINE L1 -923 5223 5118 294 240 6 43 chr2 32528796 32528888 -220727695 - MLT1E1 LTR MaLR -266 388 193 289 208 0 42 chr2 32528923 32528995 -220727588 - MLT1E1 LTR MaLR -511 82 14 277 268 0 0 chr2 32529186 32529257 -220727326 - MER116 DNA Mariner -2 78 8 229 336 144 16 chr2 32529399 32529524 -220727059 + MIR SINE MIR 48 188 -74 22 0 0 0 chr2 32529739 32529761 -220726822 + AT_rich Low_complexity Low_complexity 1 22 0 567 40 0 0 chr2 32530256 32530330 -220726253 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 695 175 33 0 chr2 32530331 32530451 -220726132 - FLAM_C SINE Alu -19 124 1 417 20 0 0 chr2 32533163 32533213 -220723370 + (CA)n Simple_repeat Simple_repeat 1 50 0 25 31 0 0 chr2 32533317 32533349 -220723234 + AT_rich Low_complexity Low_complexity 1 32 0 1750 123 63 18 chr2 32533716 32534000 -220722583 + AluSx SINE Alu 1 297 -15 197 119 24 0 chr2 32534476 32534518 -220722065 + (TA)n Simple_repeat Simple_repeat 1 43 0 2114 115 18 0 chr2 32534575 32534853 -220721730 - AluSx SINE Alu -23 289 7 1790 139 21 7 chr2 32535741 32536021 -220720562 + AluSx SINE Alu 11 294 -18 195 417 0 0 chr2 32536021 32536129 -220720454 + MIR SINE MIR 40 147 -61 273 366 16 63 chr2 32536243 32536434 -220720149 - MIR3 SINE MIR -11 197 16 1706 150 10 70 chr2 32536875 32537188 -220719395 - AluJb SINE Alu -18 294 1 23 33 0 0 chr2 32537188 32537218 -220719365 + AT_rich Low_complexity Low_complexity 1 30 0 29 84 0 0 chr2 32537434 32537505 -220719078 + AT_rich Low_complexity Low_complexity 1 71 0 332 149 0 15 chr2 32537824 32537891 -220718692 + (CA)n Simple_repeat Simple_repeat 1 66 0 281 281 0 0 chr2 32538621 32538678 -220717905 - MER5A DNA MER1_type -130 59 3 485 118 0 0 chr2 32538758 32538826 -220717757 + AluJb SINE Alu 48 115 -197 333 237 18 25 chr2 32538862 32538980 -220717603 + GA-rich Low_complexity Low_complexity 1 118 -395 2144 91 0 4 chr2 32538980 32539256 -220717327 + AluSx SINE Alu 1 275 -37 333 237 18 25 chr2 32539256 32539379 -220717204 + GA-rich Low_complexity Low_complexity 118 513 0 307 373 86 4 chr2 32539420 32539664 -220716919 - L3 LINE CR1 -243 1334 1071 1061 223 23 0 chr2 32540428 32540643 -220715940 + MER58A DNA MER1_type 1 220 -4 386 335 116 6 chr2 32541242 32541415 -220715168 - MIR3 SINE MIR -1 207 16 517 215 46 39 chr2 32541476 32541606 -220714977 - FLAM_A SINE Alu -2 131 1 2790 7 0 0 chr2 32541740 32542048 -220714535 - AluYa5 SINE Alu -3 308 1 1792 216 99 43 chr2 32542100 32542726 -220713857 + L1ME4a LINE L1 5457 6117 -4 234 0 0 0 chr2 32543116 32543142 -220713441 + (T)n Simple_repeat Simple_repeat 1 26 0 24 53 0 0 chr2 32543593 32543631 -220712952 + AT_rich Low_complexity Low_complexity 1 38 0 207 186 0 0 chr2 32545883 32545926 -220710657 + A-rich Low_complexity Low_complexity 1 43 0 2129 125 0 3 chr2 32546517 32546806 -220709777 - AluSx SINE Alu -24 288 1 186 43 0 0 chr2 32547199 32547222 -220709361 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 200 210 0 16 chr2 32547423 32547485 -220709098 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 2176 112 0 0 chr2 32547660 32547945 -220708638 + AluSx SINE Alu 1 285 -27 261 0 0 0 chr2 32547945 32547974 -220708609 + (CA)n Simple_repeat Simple_repeat 2 30 0 28 0 0 0 chr2 32550727 32550755 -220705828 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 32551002 32551033 -220705550 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr2 32551151 32551177 -220705406 + AT_rich Low_complexity Low_complexity 1 26 0 240 258 86 32 chr2 32551364 32551457 -220705126 + L2 LINE L2 2181 2278 -1036 736 305 98 38 chr2 32551466 32551614 -220704969 + L2 LINE L2 2496 2634 -679 2154 103 3 7 chr2 32551614 32551915 -220704668 - AluSx SINE Alu -12 300 1 736 305 98 38 chr2 32551915 32552519 -220704064 + L2 LINE L2 2634 3308 -5 723 289 67 63 chr2 32552520 32552980 -220703603 + L2 LINE L2 2285 2746 -568 504 224 182 42 chr2 32553042 32553234 -220703349 - L2 LINE L2 -3 3310 3092 294 246 178 0 chr2 32553243 32553361 -220703222 + MER20B DNA MER1_type 31 169 -614 1415 208 86 12 chr2 32553415 32553833 -220702750 + MER20B DNA MER1_type 259 707 -76 774 272 122 64 chr2 32553836 32554399 -220702184 - L2 LINE L2 -15 3298 2626 514 267 0 22 chr2 32554399 32554534 -220702049 - L2 LINE L2 -879 2435 2304 188 74 37 0 chr2 32555123 32555150 -220701433 + L2 LINE L2 1867 1894 -1420 1183 195 87 0 chr2 32555462 32555760 -220700823 - MER33 DNA MER1_type 0 324 1 303 360 101 7 chr2 32555969 32556108 -220700475 + L2 LINE L2 3109 3260 -12 359 343 37 0 chr2 32556539 32556673 -220699910 - MIR3 SINE MIR -7 201 63 21 0 0 0 chr2 32556722 32556743 -220699840 + AT_rich Low_complexity Low_complexity 1 21 0 1303 172 0 21 chr2 32556748 32556981 -220699602 + AluJb SINE Alu 84 311 -1 22 0 0 0 chr2 32557069 32557091 -220699492 + AT_rich Low_complexity Low_complexity 1 22 0 1934 154 0 16 chr2 32557136 32557448 -220699135 + AluJb SINE Alu 1 307 -5 1534 171 26 43 chr2 32557655 32557790 -220698793 + AluJo SINE Alu 2 138 -174 1786 145 3 3 chr2 32557790 32558098 -220698485 + AluJb SINE Alu 1 308 0 1534 171 26 43 chr2 32558098 32558266 -220698317 + AluJo SINE Alu 138 301 -11 22 0 0 0 chr2 32558549 32558571 -220698012 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr2 32558852 32558889 -220697694 + AT_rich Low_complexity Low_complexity 1 37 0 28 0 0 0 chr2 32559979 32560007 -220696576 + AT_rich Low_complexity Low_complexity 1 28 0 2311 112 0 0 chr2 32561044 32561348 -220695235 - AluSx SINE Alu -8 304 1 26 30 0 0 chr2 32562208 32562241 -220694342 + AT_rich Low_complexity Low_complexity 1 33 0 24 32 0 0 chr2 32562437 32562468 -220694115 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr2 32562554 32562575 -220694008 + AT_rich Low_complexity Low_complexity 1 21 0 218 217 133 12 chr2 32563382 32563465 -220693118 - MIR SINE MIR -44 218 126 510 231 128 0 chr2 32564110 32564227 -220692356 - FLAM_A SINE Alu 0 133 2 910 171 18 77 chr2 32566616 32566838 -220689745 - MER20B DNA MER1_type -2 217 9 226 179 0 75 chr2 32566932 32566999 -220689584 - 7SK RNA RNA -99 94 33 22 56 0 0 chr2 32568873 32568909 -220687674 + AT_rich Low_complexity Low_complexity 1 36 0 381 314 70 12 chr2 32569486 32569658 -220686925 + MIR SINE MIR 1 182 -80 246 270 78 32 chr2 32569996 32570093 -220686490 + L1MB7 LINE L1 91 182 -6673 186 43 0 0 chr2 32570093 32570116 -220686467 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 246 270 78 32 chr2 32570116 32570239 -220686344 + L1MB7 LINE L1 182 549 -6306 428 189 11 22 chr2 32570731 32570821 -220685762 - FLAM_A SINE Alu -13 129 41 246 349 0 12 chr2 32570825 32570911 -220685672 + L1MB7 LINE L1 1105 1189 -5666 1791 241 89 28 chr2 32570974 32571766 -220684817 + L1MB7 LINE L1 1206 2036 -4881 2524 40 7 3 chr2 32571766 32572070 -220684513 - AluY SINE Alu -5 306 2 1791 241 89 28 chr2 32572070 32572124 -220684459 + L1MB7 LINE L1 2036 2085 -4832 1680 194 56 56 chr2 32572125 32572280 -220684303 + L1MB7 LINE L1 5712 5866 -1091 795 266 47 0 chr2 32572280 32572494 -220684089 - MER58A DNA MER1_type 0 224 1 1680 194 56 56 chr2 32572494 32572838 -220683745 + L1MB7 LINE L1 5865 6211 -746 * 14705 101 8 1 chr2 32572827 32574949 -220681634 - L1PA7 LINE L1 -1667 4479 2342 6956 60 6 3 chr2 32574949 32576623 -220679960 + L1PA7 LINE L1 4476 6154 0 2760 195 85 59 chr2 32576623 32577018 -220679565 + L1MB7 LINE L1 6198 6581 -414 2220 122 0 3 chr2 32577018 32577330 -220679253 + AluSx SINE Alu 1 311 -1 2760 195 85 59 chr2 32577330 32577553 -220679030 + L1MB7 LINE L1 6581 6797 -198 2202 111 0 7 chr2 32577553 32577850 -220678733 + AluSx SINE Alu 1 295 -17 2760 195 85 59 chr2 32577850 32577921 -220678662 + L1MB7 LINE L1 6797 6865 -130 607 149 8 82 chr2 32577921 32578055 -220678528 + FLAM_A SINE Alu 2 125 -8 1791 132 70 0 chr2 32578065 32578338 -220678245 + AluSx SINE Alu 3 294 -18 2760 195 85 59 chr2 32578338 32578403 -220678180 + L1MB7 LINE L1 6873 6985 -10 196 295 71 27 chr2 32578424 32578536 -220678047 + MIR SINE MIR 61 177 -85 629 135 0 0 chr2 32578671 32578775 -220677808 - FRAM SINE Alu -3 173 70 48 72 0 0 chr2 32578947 32579044 -220677539 + AT_rich Low_complexity Low_complexity 1 97 0 866 183 50 135 chr2 32580070 32580405 -220676178 + MER68 LTR ERV1 11 357 -248 1149 136 52 11 chr2 32580431 32580636 -220675947 - MER1B DNA MER1_type -76 221 35 1943 156 0 0 chr2 32580880 32581181 -220675402 + AluJb SINE Alu 1 301 -11 2103 97 13 19 chr2 32581889 32582198 -220674385 - AluSg SINE Alu -3 307 1 198 0 0 0 chr2 32582212 32582234 -220674349 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2218 113 0 3 chr2 32582242 32582551 -220674032 - AluSg SINE Alu -2 308 1 198 362 29 14 chr2 32582581 32582719 -220673864 + L2 LINE L2 2716 2855 -459 254 368 79 12 chr2 32583078 32583331 -220673252 + L2 LINE L2 3016 3285 -28 1673 162 37 0 chr2 32583443 32583715 -220672868 + AluJb SINE Alu 3 284 -28 366 23 0 0 chr2 32583715 32583758 -220672825 + (CA)n Simple_repeat Simple_repeat 2 44 0 4167 200 79 89 chr2 32584294 32586507 -220670076 + L1MC2 LINE L1 3 2236 -4190 1732 175 10 7 chr2 32586507 32586810 -220669773 + AluJb SINE Alu 1 304 -8 4167 200 79 89 chr2 32586810 32587049 -220669534 + L1MC2 LINE L1 2236 4908 -1518 2338 157 40 42 chr2 32587039 32587542 -220669041 + L1MC2 LINE L1 6015 6516 -108 * 1215 172 5 18 chr2 32587651 32587872 -220668711 - AluJb SINE Alu -94 218 1 1999 109 3 26 chr2 32587980 32588283 -220668300 + AluSx SINE Alu 1 296 -16 1362 143 0 27 chr2 32588237 32588461 -220668122 + AluSq SINE Alu 85 302 -11 1930 84 98 0 chr2 32588925 32589199 -220667384 + AluSc SINE Alu 1 301 -8 38 51 0 0 chr2 32589446 32589505 -220667078 + AT_rich Low_complexity Low_complexity 1 59 0 361 286 82 48 chr2 32589563 32589710 -220666873 - L2 LINE L2 0 3272 3121 506 255 73 114 chr2 32589785 32590204 -220666379 + MLT1H LTR MaLR 80 478 -71 2147 131 61 0 chr2 32590204 32590564 -220666019 + L1MA2 LINE L1 5923 6304 0 506 255 73 114 chr2 32590564 32590634 -220665949 + MLT1H LTR MaLR 478 549 0 1379 194 4 33 chr2 32590638 32590911 -220665672 + AluJo SINE Alu 39 303 -9 801 163 14 21 chr2 32590914 32591055 -220665528 + AluJo/FRAM SINE Alu 137 276 -36 400 293 33 43 chr2 32591267 32591473 -220665110 + MLT1H LTR MaLR 20 234 -315 267 249 129 57 chr2 32591622 32591834 -220664749 + MLT1H LTR MaLR 322 567 0 1672 185 0 10 chr2 32592151 32592453 -220664130 - AluJb SINE Alu -9 303 5 413 315 70 51 chr2 32592709 32593023 -220663560 + L3 LINE CR1 680 999 -578 21 57 0 0 chr2 32593238 32593273 -220663310 + AT_rich Low_complexity Low_complexity 1 35 0 526 198 0 10 chr2 32593273 32593369 -220663214 - L2 LINE L2 -32 3240 3146 278 399 14 14 chr2 32593363 32593506 -220663077 + L3 LINE CR1 1430 1572 -5 * 206 310 14 0 chr2 32594101 32594172 -220662411 + A-rich Low_complexity Low_complexity 2 73 0 183 114 0 0 chr2 32595035 32595070 -220661513 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 980 208 7 91 chr2 32595073 32595381 -220661202 - AluJb SINE Alu -30 282 1 1846 161 10 24 chr2 32595465 32595763 -220660820 + AluJo SINE Alu 1 294 -18 301 278 0 44 chr2 32595763 32595878 -220660705 + (TATATG)n Simple_repeat Simple_repeat 1 109 0 303 93 0 0 chr2 32595878 32595921 -220660662 + (TG)n Simple_repeat Simple_repeat 1 43 0 25 31 0 0 chr2 32596230 32596262 -220660321 + AT_rich Low_complexity Low_complexity 1 32 0 182 271 35 90 chr2 32596262 32596406 -220660177 - MIR SINE MIR -40 222 87 899 222 54 42 chr2 32596955 32597302 -220659281 + MLT1B LTR MaLR 1 374 0 5321 147 24 2 chr2 32598404 32599279 -220657304 - L1PA15 LINE L1 -5 6160 5267 467 340 94 26 chr2 32600831 32601096 -220655487 + L2 LINE L2 2681 2963 -351 2352 86 3 3 chr2 32601124 32601428 -220655155 + AluSg SINE Alu 1 304 -6 4055 203 99 65 chr2 32601500 32602013 -220654570 + Charlie1a DNA MER1_type 1 495 -2266 1822 159 10 19 chr2 32602013 32602322 -220654261 + AluJo SINE Alu 1 306 -6 4055 203 99 65 chr2 32602322 32602496 -220654087 + Charlie1a DNA MER1_type 495 662 -2099 2044 107 11 0 chr2 32602496 32602815 -220653768 + AluSq SINE Alu 2 323 0 4055 203 99 65 chr2 32602815 32602977 -220653606 + Charlie1a DNA MER1_type 662 817 -1944 2105 101 32 0 chr2 32602977 32603254 -220653329 + AluSc SINE Alu 1 286 -23 4055 203 99 65 chr2 32603254 32603808 -220652775 + Charlie1a DNA MER1_type 817 1455 0 378 336 55 0 chr2 32603880 32604008 -220652575 + L2 LINE L2 3134 3268 -4 2172 127 0 13 chr2 32604189 32604504 -220652079 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 32604611 32604632 -220651951 + AT_rich Low_complexity Low_complexity 1 21 0 292 216 34 34 chr2 32604862 32604950 -220651633 - L1ME LINE L1 -467 5654 5567 1746 152 7 14 chr2 32605906 32606195 -220650388 + AluSx SINE Alu 1 287 -25 21 36 0 0 chr2 32606198 32606226 -220650357 + AT_rich Low_complexity Low_complexity 1 28 0 2045 90 10 50 chr2 32606585 32606885 -220649698 - AluSx SINE Alu -22 290 3 1642 192 17 3 chr2 32608361 32608663 -220647920 - AluJb SINE Alu -6 306 1 488 232 26 53 chr2 32608906 32609096 -220647487 + L1ME2 LINE L1 5752 5936 -228 978 155 28 22 chr2 32609096 32609277 -220647306 + FRAM SINE Alu 1 176 0 288 0 0 0 chr2 32609280 32609312 -220647271 + (TA)n Simple_repeat Simple_repeat 1 32 0 492 246 84 0 chr2 32609369 32609511 -220647072 + L1MA10 LINE L1 6174 6327 -7 343 182 15 0 chr2 32610346 32610412 -220646171 + Alu SINE Alu 235 301 0 1090 232 24 0 chr2 32610925 32611171 -220645412 - MIR SINE MIR 0 262 11 2313 103 0 0 chr2 32611880 32612190 -220644393 - AluSg SINE Alu 0 310 1 21 36 0 0 chr2 32613512 32613540 -220643043 + AT_rich Low_complexity Low_complexity 1 28 0 2489 62 0 7 chr2 32614293 32614601 -220641982 + AluY SINE Alu 1 306 -5 1922 149 10 3 chr2 32614715 32615010 -220641573 - AluJb SINE Alu -13 299 3 217 250 28 0 chr2 32615152 32615224 -220641359 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 3886 242 70 41 chr2 32615593 32616487 -220640096 + L2 LINE L2 1567 2525 -788 1489 171 44 18 chr2 32616487 32616761 -220639822 - AluJo SINE Alu -31 281 1 3886 242 70 41 chr2 32616761 32617482 -220639101 + L2 LINE L2 2525 3224 -89 388 288 65 20 chr2 32617573 32617726 -220638857 - MIR SINE MIR -54 208 49 1686 146 16 57 chr2 32618435 32618750 -220637833 - AluJb SINE Alu -10 302 1 1902 130 0 0 chr2 32618953 32619223 -220637360 + AluSx SINE Alu 43 312 0 1078 258 168 113 chr2 32619723 32620330 -220636253 + L2 LINE L2 739 1516 -1798 498 217 11 0 chr2 32620330 32620422 -220636161 - MER81 DNA DNA -21 93 1 1078 258 168 113 chr2 32620422 32620777 -220635806 + L2 LINE L2 1516 1850 -1464 496 327 127 16 chr2 32621028 32621398 -220635185 - L1ME3A LINE L1 -222 5948 5538 3243 184 69 6 chr2 32621398 32622063 -220634520 + MER67C LTR ERV1 1 707 -3 331 277 38 63 chr2 32622070 32622229 -220634354 - L1ME3A LINE L1 -2499 5543 5389 1707 158 38 38 chr2 32622430 32622508 -220634075 + MER7A DNA MER2_type 2 79 -2959 1633 138 80 4 chr2 32622508 32622783 -220633800 + AluSx SINE Alu 1 296 -16 1707 158 38 38 chr2 32622783 32623051 -220633532 + MER7A DNA MER2_type 78 346 0 442 268 176 7 chr2 32623900 32624053 -220632530 - MER5A DNA MER1_type -6 183 5 1300 154 0 0 chr2 32624549 32624737 -220631846 + AluSx SINE Alu 5 192 -120 6725 87 29 33 chr2 32624803 32625857 -220630726 + L1MA1 LINE L1 5254 6302 0 597 200 32 19 chr2 32625870 32626025 -220630558 - HsTC2a DNA Tc2 -21 721 565 2112 126 7 0 chr2 32626028 32626329 -220630254 + AluSx SINE Alu 2 304 -8 2172 118 6 13 chr2 32626365 32626678 -220629905 + AluSx SINE Alu 1 311 -1 1551 250 76 46 chr2 32626712 32627280 -220629303 - HsTC2a DNA Tc2 -156 588 4 2204 116 3 3 chr2 32627449 32627759 -220628824 - AluSg SINE Alu 0 310 1 24 32 0 0 chr2 32628050 32628081 -220628502 + AT_rich Low_complexity Low_complexity 1 31 0 562 265 42 76 chr2 32628776 32629016 -220627567 - L1ME4a LINE L1 -216 5905 5658 2176 107 7 3 chr2 32629016 32629314 -220627269 + AluSg SINE Alu 1 299 -11 562 265 42 76 chr2 32629314 32629383 -220627200 - L1ME4a LINE L1 -463 5658 5607 2293 106 0 3 chr2 32629383 32629685 -220626898 - AluSx SINE Alu -11 301 1 562 265 42 76 chr2 32629685 32629729 -220626854 - L1ME4a LINE L1 -514 5607 5563 738 144 0 0 chr2 32630230 32630341 -220626242 + FLAM_C SINE Alu 1 111 -32 25 0 0 0 chr2 32630375 32630400 -220626183 + AT_rich Low_complexity Low_complexity 1 25 0 282 363 64 12 chr2 32630423 32630479 -220626104 + MER5A DNA MER1_type 10 62 -127 2123 139 0 3 chr2 32630479 32630782 -220625801 + AluSq SINE Alu 1 302 -11 282 363 64 12 chr2 32630782 32630889 -220625694 + MER5A DNA MER1_type 62 185 -4 1554 121 22 5 chr2 32630889 32631112 -220625471 + AluJb SINE Alu 3 229 -83 182 62 31 0 chr2 32631121 32631153 -220625430 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2128 130 3 0 chr2 32631529 32631836 -220624747 - AluSq SINE Alu -5 308 1 231 308 17 33 chr2 32632520 32632640 -220623943 + L1ME LINE L1 5732 5849 -1959 2153 119 0 7 chr2 32632790 32633092 -220623491 + AluSc SINE Alu 1 300 -9 242 308 11 0 chr2 32633220 32633311 -220623272 + L1ME LINE L1 5773 5864 -257 1687 172 7 0 chr2 32634562 32634878 -220621705 - AluJb SINE Alu 0 318 1 1662 154 92 0 chr2 32635868 32636141 -220620442 + AluSx SINE Alu 1 298 -14 1967 134 0 0 chr2 32636538 32636814 -220619769 - AluSx SINE Alu -36 276 1 1977 132 10 3 chr2 32637003 32637292 -220619291 + AluSx SINE Alu 1 291 -21 480 290 89 54 chr2 32637337 32637409 -220619174 - MIR SINE MIR -3 259 191 1650 181 0 48 chr2 32637409 32637719 -220618864 + AluJb SINE Alu 1 295 -17 480 290 89 54 chr2 32637719 32637870 -220618713 - MIR SINE MIR -71 191 28 203 212 15 183 chr2 32637838 32637975 -220618608 + MIR3 SINE MIR 47 160 -48 * 1770 156 19 19 chr2 32638035 32638343 -220618240 + AluJb SINE Alu 1 308 -4 253 91 0 0 chr2 32638667 32638700 -220617883 + L1MC5 LINE L1 6768 6800 -1161 1283 256 48 28 chr2 32638700 32639201 -220617382 + MLT2B3 LTR ERVL 1 510 -44 350 126 0 0 chr2 32639265 32639319 -220617264 + MLT2D LTR ERVL 367 413 -1 911 206 22 80 chr2 32639376 32639652 -220616931 + L1MC5 LINE L1 6975 7234 -727 1362 173 42 39 chr2 32639725 32640031 -220616552 + MER33 DNA MER1_type 1 307 -17 201 154 0 0 chr2 32640154 32640193 -220616390 + (CA)n Simple_repeat Simple_repeat 2 40 0 376 213 99 91 chr2 32640196 32640343 -220616240 + L1MC5 LINE L1 7451 7602 -359 2241 82 0 20 chr2 32640343 32640662 -220615921 + AluSp SINE Alu 1 313 0 376 213 99 91 chr2 32640662 32640777 -220615806 + L1MC5 LINE L1 7602 7715 -246 258 208 0 0 chr2 32640811 32640859 -220615724 + L1MC5 LINE L1 7709 7756 -205 2029 143 10 0 chr2 32640860 32641161 -220615422 + AluSq SINE Alu 1 304 -9 386 202 0 11 chr2 32641173 32641267 -220615316 + GA-rich Low_complexity Low_complexity 4 96 0 247 265 73 103 chr2 32641506 32641568 -220615015 + MIR SINE MIR 77 139 -123 2710 61 38 12 chr2 32641568 32641912 -220614671 + L1PA10 LINE L1 5812 6164 -4 247 265 73 103 chr2 32641912 32641985 -220614598 + MIR SINE MIR 139 208 -54 189 267 0 0 chr2 32642040 32642085 -220614498 - MIR3 SINE MIR -41 167 123 2138 116 3 10 chr2 32642377 32642688 -220613895 + AluSx SINE Alu 1 309 -3 2504 49 3 7 chr2 32643048 32643352 -220613231 - AluY SINE Alu -8 303 1 1768 163 21 7 chr2 32643385 32643673 -220612910 - AluJb SINE Alu -20 292 1 214 184 48 6 chr2 32644138 32644192 -220612391 + MIR SINE MIR 107 160 -62 25 65 0 0 chr2 32644843 32644889 -220611694 + AT_rich Low_complexity Low_complexity 1 46 0 22 70 0 0 chr2 32644950 32644993 -220611590 + AT_rich Low_complexity Low_complexity 1 43 0 249 185 17 118 chr2 32645147 32645266 -220611317 + L1ME4a LINE L1 5858 5964 -157 225 229 25 90 chr2 32645280 32645402 -220611181 - L1MC4 LINE L1 -1339 6703 6590 507 17 0 0 chr2 32645503 32645563 -220611020 + (TG)n Simple_repeat Simple_repeat 2 61 0 1380 188 88 0 chr2 32645563 32645824 -220610759 - AluJo SINE Alu -28 284 1 2028 119 7 0 chr2 32645920 32646198 -220610385 - AluSx SINE Alu -32 280 1 198 265 0 20 chr2 32646394 32646443 -220610140 - L2 LINE L2 -5 3267 3220 2132 116 3 0 chr2 32646651 32646945 -220609638 + AluSx SINE Alu 1 295 -17 1511 172 77 11 chr2 32647185 32647458 -220609125 - AluJo SINE Alu -21 291 1 701 197 0 8 chr2 32647465 32647587 -220608996 - FLAM_A SINE Alu -4 138 18 2164 106 0 0 chr2 32647616 32647926 -220608657 + AluSx SINE Alu 1 310 0 2215 120 0 0 chr2 32648357 32648648 -220607935 + AluSx SINE Alu 1 291 -21 4873 161 33 15 chr2 32648651 32649100 -220607483 + L1MB5 LINE L1 5199 5639 -535 2373 102 0 0 chr2 32649100 32649404 -220607179 + AluSx SINE Alu 1 304 -8 4873 161 33 15 chr2 32649404 32649908 -220606675 + L1MB5 LINE L1 5639 6166 -8 186 71 0 0 chr2 32650011 32650039 -220606544 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 1905 121 0 72 chr2 32650393 32650725 -220605858 + AluSc SINE Alu 1 308 -1 2335 101 0 3 chr2 32650817 32651124 -220605459 + AluSq SINE Alu 1 306 -7 1023 168 35 0 chr2 32651816 32651989 -220604594 - AluSg/x SINE Alu -3 307 129 2075 134 7 0 chr2 32652224 32652523 -220604060 + AluSx SINE Alu 1 301 -11 1734 127 31 65 chr2 32653422 32653751 -220602832 - AluSx SINE Alu 0 320 2 259 253 409 0 chr2 32653903 32654033 -220602550 + MIR SINE MIR 1 77 -185 2089 137 0 3 chr2 32654033 32654340 -220602243 + AluSx SINE Alu 1 306 -6 259 253 409 0 chr2 32654340 32654395 -220602188 + MIR SINE MIR 77 262 0 1154 179 124 13 chr2 32654414 32654648 -220601935 - AluJo SINE Alu -52 260 1 1616 182 79 10 chr2 32654905 32655252 -220601331 - THE1C LTR MaLR -1 431 3 26 50 0 0 chr2 32655397 32655437 -220601146 + AT_rich Low_complexity Low_complexity 1 40 0 443 140 75 11 chr2 32655491 32655584 -220600999 + L1MB3 LINE L1 6078 6176 -7 24 32 0 0 chr2 32655584 32655615 -220600968 + AT_rich Low_complexity Low_complexity 1 31 0 192 77 0 0 chr2 32655938 32655964 -220600619 + (A)n Simple_repeat Simple_repeat 1 26 0 31 20 0 20 chr2 32656062 32656079 -220600504 + AT_rich Low_complexity Low_complexity 1 17 -31 1562 201 0 10 chr2 32656079 32656373 -220600210 + AluJo SINE Alu 2 292 -20 31 20 0 20 chr2 32656373 32656404 -220600179 + AT_rich Low_complexity Low_complexity 17 48 0 4241 203 105 103 chr2 32657784 32657945 -220598638 + L1MC3 LINE L1 6085 6244 -1541 2274 99 0 3 chr2 32657945 32658238 -220598345 + AluSc SINE Alu 1 292 -17 2382 81 3 0 chr2 32658238 32658536 -220598047 + AluSg SINE Alu 1 299 -11 4241 203 105 103 chr2 32658536 32658885 -220597698 + L1MC3 LINE L1 6244 6591 -1194 2047 103 0 71 chr2 32658885 32659196 -220597387 + AluSx SINE Alu 1 289 -23 4241 203 105 103 chr2 32659196 32659358 -220597225 + L1MC3 LINE L1 6591 6751 -1034 2277 95 3 3 chr2 32659358 32659662 -220596921 - AluSp SINE Alu -9 304 1 4241 203 105 103 chr2 32659662 32660022 -220596561 + L1MC3 LINE L1 6751 7109 -676 280 258 0 15 chr2 32660022 32660088 -220596495 + MLT1F1 LTR MaLR 67 131 -436 4241 203 105 103 chr2 32660088 32660456 -220596127 + L1MC3 LINE L1 7109 7561 -224 2144 87 26 23 chr2 32660456 32660765 -220595818 + AluY SINE Alu 1 310 -1 4241 203 105 103 chr2 32660765 32660978 -220595605 + L1MC3 LINE L1 7561 7772 -13 2178 110 3 0 chr2 32661263 32661554 -220595029 - AluSx SINE Alu -20 292 1 816 199 0 0 chr2 32661775 32661906 -220594677 + FLAM_C SINE Alu 1 131 -12 614 86 0 0 chr2 32661930 32662011 -220594572 + HY1 scRNA scRNA 17 97 -15 1497 66 0 25 chr2 32662041 32662237 -220594346 + AluY SINE Alu 1 191 -120 1180 110 0 0 chr2 32662245 32662409 -220594174 + AluY SINE Alu 127 290 -21 508 326 86 50 chr2 32662517 32662934 -220593649 - L2 LINE L2 -10 3303 2872 1432 210 17 0 chr2 32662934 32663225 -220593358 - AluJo SINE Alu -14 298 3 243 300 29 0 chr2 32663522 32663592 -220592991 - L2 LINE L2 0 3272 3201 211 260 73 42 chr2 32663705 32663801 -220592782 - MER5A DNA MER1_type -2 187 89 2736 201 117 43 chr2 32664072 32664193 -220592390 + Charlie1 DNA MER1_type 35 146 -2615 2261 101 3 0 chr2 32664193 32664491 -220592092 + AluSx SINE Alu 1 299 -13 2736 201 117 43 chr2 32664491 32664853 -220591730 + Charlie1 DNA MER1_type 146 480 -2281 2302 81 3 66 chr2 32664853 32665187 -220591396 + AluSp SINE Alu 1 313 0 2736 201 117 43 chr2 32665187 32665586 -220590997 + Charlie1 DNA MER1_type 480 2274 -487 1874 135 25 36 chr2 32665681 32665763 -220590820 + Charlie1 DNA MER1_type 2264 2345 -416 1916 151 3 10 chr2 32665763 32666061 -220590522 + AluJb SINE Alu 1 296 -16 1874 135 25 36 chr2 32666061 32666340 -220590243 + Charlie1 DNA MER1_type 2345 2621 -140 703 174 0 0 chr2 32666377 32666486 -220590097 - AluY SINE Alu -9 302 194 799 159 23 15 chr2 32666503 32666635 -220589948 - FLAM_C SINE Alu 0 133 1 567 233 0 0 chr2 32666657 32666773 -220589810 + Charlie1 DNA MER1_type 2632 2747 -14 336 293 54 75 chr2 32666944 32667183 -220589400 + L1MC4a LINE L1 5833 6066 -1742 2305 84 7 0 chr2 32667219 32667516 -220589067 + AluSp SINE Alu 1 299 -14 28 0 0 0 chr2 32667545 32667573 -220589010 + AT_rich Low_complexity Low_complexity 1 28 0 953 197 11 22 chr2 32668142 32668325 -220588258 + MER58A DNA MER1_type 27 207 -17 2241 97 0 10 chr2 32668430 32668728 -220587855 + AluSx SINE Alu 1 295 -17 930 182 0 0 chr2 32668963 32669117 -220587466 + FRAM SINE Alu 9 162 -14 346 136 0 0 chr2 32669118 32669177 -220587406 + L1MC/D LINE L1 5378 5436 -2372 * 491 298 87 92 chr2 32669152 32669878 -220586705 + L1MEc LINE L1 10 738 -5658 2476 93 0 0 chr2 32669878 32670189 -220586394 - AluSx SINE Alu -1 311 1 491 298 87 92 chr2 32670189 32670276 -220586307 + L1MEc LINE L1 738 824 -5572 2159 117 0 3 chr2 32670276 32670588 -220585995 + AluSx SINE Alu 1 311 0 1785 129 4 0 chr2 32670595 32670851 -220585732 + AluJb SINE Alu 1 257 -55 491 298 87 92 chr2 32670851 32671098 -220585485 + L1MEc LINE L1 830 1077 -5319 2231 108 0 7 chr2 32671098 32671394 -220585189 + AluSx SINE Alu 1 294 -18 491 298 87 92 chr2 32671394 32671960 -220584623 + L1MEc LINE L1 1077 1638 -4758 328 203 29 0 chr2 32672026 32672095 -220584488 + AluSp SINE Alu 121 191 -112 443 87 14 0 chr2 32672095 32672164 -220584419 + (GA)n Simple_repeat Simple_repeat 1 70 0 533 257 29 38 chr2 32672166 32672199 -220584384 + L1MEc LINE L1 2553 2585 -3630 2101 123 13 0 chr2 32672199 32672499 -220584084 + AluSx SINE Alu 6 309 -3 533 257 29 38 chr2 32672499 32672675 -220583908 + L1MEc LINE L1 2585 2760 -3455 871 192 0 0 chr2 32672677 32672823 -220583760 - FRAM SINE Alu -30 146 1 283 296 8 16 chr2 32673057 32673182 -220583401 + L1M4 LINE L1 1564 1687 -4855 666 67 0 0 chr2 32673313 32673388 -220583195 - AluSg/x SINE Alu -162 148 74 718 317 108 21 chr2 32673535 32673869 -220582714 - L2 LINE L2 -372 2942 2580 1722 143 20 34 chr2 32673947 32674241 -220582342 - AluJb SINE Alu -22 290 1 2949 226 91 45 chr2 32674241 32674447 -220582136 + L2 LINE L2 1997 2192 -1121 2203 116 0 3 chr2 32674447 32674749 -220581834 + AluSg SINE Alu 1 301 -9 2949 226 91 45 chr2 32674749 32675309 -220581274 + L2 LINE L2 2192 2725 -588 1755 180 0 24 chr2 32675309 32675603 -220580980 + AluJo SINE Alu 1 287 -25 2949 226 91 45 chr2 32675603 32675811 -220580772 + L2 LINE L2 2725 3015 -298 1723 152 26 30 chr2 32675811 32676114 -220580469 - AluJo SINE Alu -10 302 1 2949 226 91 45 chr2 32676114 32676152 -220580431 + L2 LINE L2 3015 3050 -263 2467 65 0 7 chr2 32676152 32676458 -220580125 - AluY SINE Alu -7 304 1 1117 75 0 0 chr2 32676461 32676594 -220579989 - AluSq/x SINE Alu -180 133 1 301 119 0 0 chr2 32676731 32676773 -220579810 - MER4E LTR ERV1 -74 692 651 326 236 71 79 chr2 32676796 32676923 -220579660 + L2 LINE L2 3180 3305 -8 2529 43 0 7 chr2 32676961 32677266 -220579317 - AluY SINE Alu -7 304 2 27 73 0 0 chr2 32677315 32677370 -220579213 + AT_rich Low_complexity Low_complexity 1 55 0 234 304 56 28 chr2 32677471 32677587 -220578996 + MIR SINE MIR 1 127 -81 357 282 58 10 chr2 32677608 32677725 -220578858 + MIR SINE MIR 37 159 -49 2171 112 7 0 chr2 32677794 32678098 -220578485 + AluY SINE Alu 1 306 -5 272 303 0 0 chr2 32678098 32678187 -220578396 + L1MC4 LINE L1 6615 6703 -1339 247 179 45 0 chr2 32678162 32678229 -220578354 - L1MCa LINE L1 -4362 2064 1995 * 237 244 47 0 chr2 32678203 32678289 -220578294 - L1MC4 LINE L1 -1339 6983 6894 * 269 134 75 15 chr2 32678314 32678381 -220578202 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 380 254 127 8 chr2 32678506 32678632 -220577951 + MIR SINE MIR 61 201 -61 381 271 34 8 chr2 32679357 32679475 -220577108 + L1ME3A LINE L1 6042 6162 -8 508 253 77 16 chr2 32679516 32679698 -220576885 + L1ME3A LINE L1 4973 5165 -981 911 135 0 0 chr2 32679698 32679824 -220576759 + AluJo SINE Alu 1 126 -186 1340 200 36 11 chr2 32679834 32680140 -220576443 + AluJo SINE Alu 1 313 0 1649 196 72 58 chr2 32680175 32680569 -220576014 + L1ME3A LINE L1 5216 5663 -507 2260 103 0 13 chr2 32680569 32680870 -220575713 + AluSx SINE Alu 1 297 -15 1649 196 72 58 chr2 32680870 32681093 -220575490 + L1ME3A LINE L1 5663 5882 -288 923 168 18 6 chr2 32681101 32681268 -220575315 + AluJo SINE Alu 136 304 -8 315 278 217 0 chr2 32681272 32681452 -220575131 + L1ME3A LINE L1 5895 6113 -57 275 347 32 11 chr2 32681698 32681793 -220574790 - L2 LINE L2 -7 3265 3169 377 357 95 37 chr2 32681841 32682282 -220574301 - L2 LINE L2 -220 3052 2566 243 162 0 0 chr2 32682317 32682354 -220574229 - MER5A DNA MER1_type -151 38 2 721 211 46 64 chr2 32682368 32682586 -220573997 - MER58C DNA MER1_type -1 214 1 2343 98 0 3 chr2 32682613 32682919 -220573664 + AluSg1 SINE Alu 1 305 -4 234 160 20 0 chr2 32683428 32683478 -220573105 - LTR66 LTR ERVL -166 444 394 2183 95 3 3 chr2 32684232 32684528 -220572055 + AluSg SINE Alu 1 296 -14 31 112 0 0 chr2 32685889 32686032 -220570551 + GC_rich Low_complexity Low_complexity 1 143 0 308 271 43 125 chr2 32686032 32686313 -220570270 - L1M2 LINE L1 -5446 1403 1146 212 68 0 68 chr2 32686318 32686362 -220570221 + (GGA)n Simple_repeat Simple_repeat 3 43 0 344 265 70 93 chr2 32686480 32686695 -220569888 + L1M2 LINE L1 713 922 -5927 202 164 15 104 chr2 32687368 32687435 -220569148 + MIR SINE MIR 117 177 -85 1611 168 7 26 chr2 32687704 32688008 -220568575 + AluJo SINE Alu 5 302 -10 2382 85 0 25 chr2 32688348 32688667 -220567916 - AluSx SINE Alu -1 311 1 563 258 56 26 chr2 32688946 32689116 -220567467 + MIR SINE MIR 38 212 -50 2067 114 13 3 chr2 32689656 32689954 -220566629 + AluSg SINE Alu 1 301 -9 246 156 0 0 chr2 32689932 32689996 -220566587 + GA-rich Low_complexity Low_complexity 1 64 0 497 206 89 93 chr2 32690001 32690129 -220566454 + L1MC4a LINE L1 5678 5805 -367 1538 161 31 49 chr2 32690129 32690415 -220566168 + AluJo SINE Alu 1 281 -31 * 2582 50 0 0 chr2 32690414 32690711 -220565872 - AluY SINE Alu -14 297 1 497 206 89 93 chr2 32690711 32690841 -220565742 + L1MC4a LINE L1 6101 5825 -347 1500 141 43 53 chr2 32691494 32691798 -220564785 + AluJo SINE Alu 1 301 -11 1827 104 14 34 chr2 32691830 32692127 -220564456 - AluSx SINE Alu -21 291 1 2318 85 0 0 chr2 32692805 32693111 -220563472 - AluSx SINE Alu -6 306 1 2155 111 7 0 chr2 32693263 32693570 -220563013 + AluSq SINE Alu 1 309 -4 1585 179 98 9 chr2 32693731 32694066 -220562517 + MLT1A1 LTR MaLR 1 365 0 1841 119 25 7 chr2 32694374 32694659 -220561924 + AluSc SINE Alu 1 290 -19 1877 144 3 23 chr2 32694666 32694971 -220561612 + AluJb SINE Alu 1 299 -13 978 139 7 0 chr2 32695016 32695190 -220561393 - AluSg/x SINE Alu 0 306 132 851 215 13 0 chr2 32695288 32695446 -220561137 + AluSg/x SINE Alu 128 287 -23 380 234 0 43 chr2 32695449 32695461 -220561122 - L1MC4 LINE L1 -1339 6703 6692 1997 105 7 23 chr2 32695461 32695765 -220560818 + AluSq SINE Alu 1 299 -14 380 234 0 43 chr2 32695765 32695846 -220560737 - L1MC4 LINE L1 -1350 6692 6614 * 408 283 0 0 chr2 32695766 32695858 -220560725 + L1MC4 LINE L1 6614 6705 -1337 225 159 0 0 chr2 32695859 32695903 -220560680 + (TA)n Simple_repeat Simple_repeat 1 44 0 187 293 17 0 chr2 32695912 32695970 -220560613 + MIR SINE MIR 49 107 -155 848 169 88 0 chr2 32695995 32696143 -220560440 + FRAM SINE Alu 1 155 -21 1233 199 13 55 chr2 32696145 32696452 -220560131 + AluJo SINE Alu 1 294 -18 542 224 20 20 chr2 32696480 32696632 -220559951 + L1MA10 LINE L1 6183 6334 0 234 221 106 88 chr2 32696635 32696748 -220559835 + MIR SINE MIR 138 252 -10 809 156 0 22 chr2 32696777 32696912 -220559671 + AluJo/FLAM SINE Alu 2 133 -169 1855 91 44 4 chr2 32696915 32697190 -220559393 + AluSx SINE Alu 1 286 -26 2230 103 0 3 chr2 32697324 32697634 -220558949 + AluSx SINE Alu 1 309 -3 217 176 20 0 chr2 32697718 32697769 -220558814 + T-rich Low_complexity Low_complexity 4 55 0 2059 131 0 0 chr2 32697860 32698157 -220558426 + AluSx SINE Alu 5 301 -11 2274 92 7 0 chr2 32698439 32698744 -220557839 - AluSg SINE Alu -3 307 1 535 150 71 114 chr2 32698823 32698963 -220557620 - MER20 DNA MER1_type 0 219 86 603 122 0 0 chr2 32698964 32699046 -220557537 + AluSg1 SINE Alu 1 82 -227 333 156 10 156 chr2 32699059 32699155 -220557428 - MER20 DNA MER1_type -137 82 1 540 278 108 10 chr2 32699326 32699520 -220557063 + MIR SINE MIR 50 262 0 308 284 0 37 chr2 32699572 32699653 -220556930 - MER5A DNA MER1_type -3 186 109 227 258 43 0 chr2 32700367 32700460 -220556123 - MARNA DNA Mariner -361 225 129 843 216 28 0 chr2 32700466 32700642 -220555941 + L1ME3A LINE L1 5990 6170 0 2143 104 3 0 chr2 32701112 32701401 -220555182 + AluSg SINE Alu 1 290 -20 1943 139 0 7 chr2 32701409 32701711 -220554872 + AluSg SINE Alu 1 300 -10 1589 184 7 7 chr2 32701754 32702047 -220554536 + AluJo SINE Alu 1 293 -19 1489 165 74 3 chr2 32702076 32702361 -220554222 + AluJb SINE Alu 1 305 -7 1713 122 13 69 chr2 32702437 32702761 -220553822 + AluSq SINE Alu 1 307 0 183 156 0 0 chr2 32702834 32702866 -220553717 + T-rich Low_complexity Low_complexity 1 32 0 392 100 43 250 chr2 32702866 32702922 -220553661 - HY1 scRNA scRNA -1 111 45 1881 142 17 0 chr2 32702922 32703218 -220553365 + AluSx SINE Alu 1 301 -11 392 100 43 250 chr2 32703218 32703231 -220553352 - HY1 scRNA scRNA -67 45 31 1777 106 0 4 chr2 32703231 32703477 -220553106 + AluSq SINE Alu 56 300 -13 392 100 43 250 chr2 32703477 32703546 -220553037 - HY1 scRNA scRNA -81 31 1 2384 60 7 0 chr2 32703556 32703856 -220552727 - AluY SINE Alu -9 302 1 991 139 6 35 chr2 32704036 32704209 -220552374 - FRAM SINE Alu -9 167 1 1840 106 38 0 chr2 32704449 32704713 -220551870 + AluSc SINE Alu 1 274 -35 1285 124 0 5 chr2 32704713 32704918 -220551665 + AluSg/x SINE Alu 103 308 -301 1943 130 3 0 chr2 32704918 32705203 -220551380 + AluSx SINE Alu 1 286 -26 1285 124 0 5 chr2 32705203 32705221 -220551362 + AluSg/x SINE Alu 308 609 0 22 0 0 0 chr2 32705993 32706015 -220550568 + AT_rich Low_complexity Low_complexity 1 22 0 589 221 7 0 chr2 32706065 32706205 -220550378 - MER113 DNA MER1_type? -223 298 158 1091 181 9 19 chr2 32706227 32706277 -220550306 + AluJb SINE Alu 85 134 -178 2355 66 0 0 chr2 32706277 32706578 -220550005 + AluY SINE Alu 1 301 -10 1091 181 9 19 chr2 32706578 32706743 -220549840 + AluJb SINE Alu 134 298 -14 2033 115 16 0 chr2 32707069 32707374 -220549209 + AluSg SINE Alu 1 310 0 914 183 0 27 chr2 32707374 32707541 -220549042 + AluSg/x SINE Alu 130 293 -17 2270 101 0 0 chr2 32707541 32707849 -220548734 + AluSg SINE Alu 1 308 -2 914 183 0 27 chr2 32707849 32707867 -220548716 + AluSg/x SINE Alu 293 310 0 782 161 0 0 chr2 32708507 32708619 -220547964 + FLAM_C SINE Alu 2 113 -30 23 42 0 21 chr2 32708623 32708644 -220547939 + AT_rich Low_complexity Low_complexity 1 21 -26 2128 101 0 0 chr2 32708644 32708931 -220547652 + AluSg SINE Alu 1 287 -23 23 42 0 21 chr2 32708931 32708957 -220547626 + AT_rich Low_complexity Low_complexity 21 47 0 2088 105 10 0 chr2 32708957 32709252 -220547331 + AluSx SINE Alu 1 298 -14 2105 100 7 0 chr2 32709319 32709618 -220546965 + AluSp SINE Alu 1 301 -12 1118 253 57 64 chr2 32709793 32710148 -220546435 + L1MEc LINE L1 136 489 -5907 2596 138 34 2 chr2 32710148 32710561 -220546022 - MSTB LTR MaLR 0 426 1 1118 253 57 64 chr2 32710561 32710644 -220545939 + L1MEc LINE L1 489 571 -5825 2034 121 13 0 chr2 32710646 32710944 -220545639 + AluSq SINE Alu 2 303 -10 452 70 0 0 chr2 32710948 32711005 -220545578 + AluSg/x SINE Alu 194 250 -62 1021 164 17 59 chr2 32711005 32711243 -220545340 + AluJo SINE Alu 85 312 0 1917 106 46 3 chr2 32711251 32711533 -220545050 + AluSc SINE Alu 2 295 -14 2012 142 3 0 chr2 32711580 32711891 -220544692 + AluSx SINE Alu 1 312 0 1640 166 25 0 chr2 32711912 32712195 -220544388 - AluJb SINE Alu -11 301 12 356 225 15 10 chr2 32712205 32712312 -220544271 + L1M2c LINE L1 1317 1798 -4585 2471 43 3 3 chr2 32712318 32712619 -220543964 + AluY SINE Alu 1 301 -10 1419 77 0 10 chr2 32712619 32712814 -220543769 + AluY SINE Alu 106 298 -13 995 261 126 29 chr2 32712816 32713230 -220543353 + L1MEc LINE L1 1399 1852 -4544 1224 159 49 9 chr2 32713239 32713465 -220543118 - AluJb SINE Alu -18 294 60 2180 93 17 0 chr2 32713490 32713781 -220542802 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 32713876 32713897 -220542686 + AT_rich Low_complexity Low_complexity 1 21 0 340 253 24 0 chr2 32713940 32714023 -220542560 - MIR SINE MIR -140 122 38 1689 79 162 26 chr2 32714064 32714329 -220542254 - AluSx SINE Alu -1 301 1 538 214 0 0 chr2 32714366 32714469 -220542114 - AluJb SINE Alu -30 282 180 2131 111 7 0 chr2 32714568 32714875 -220541708 - AluSx SINE Alu -2 310 2 2043 84 3 78 chr2 32716886 32717073 -220539510 - AluSg SINE Alu -12 298 143 2189 85 0 41 chr2 32717073 32717390 -220539193 - AluSc SINE Alu -4 305 2 2043 84 3 78 chr2 32717390 32717524 -220539059 - AluSg SINE Alu -167 143 1 701 147 199 0 chr2 32717874 32718009 -220538574 + AluJb SINE Alu 135 296 -16 450 194 163 10 chr2 32718009 32718107 -220538476 + AluY SINE Alu 1 113 -198 22 56 0 0 chr2 32718109 32718145 -220538438 + AT_rich Low_complexity Low_complexity 1 36 0 1029 197 24 5 chr2 32718304 32718517 -220538066 + AluJo SINE Alu 86 302 -10 2348 78 0 3 chr2 32718678 32718987 -220537596 - AluY SINE Alu -3 308 1 1908 121 17 3 chr2 32719121 32719410 -220537173 + AluSx SINE Alu 1 293 -19 1392 171 65 7 chr2 32719474 32719749 -220536834 + AluJb SINE Alu 1 291 -21 1724 82 129 0 chr2 32720165 32720421 -220536162 + AluSc SINE Alu 1 289 -20 1958 133 0 0 chr2 32720611 32720912 -220535671 + AluSx SINE Alu 1 301 -11 253 257 140 103 chr2 32720912 32720973 -220535610 + MIR SINE MIR 60 117 -145 2059 142 0 0 chr2 32720973 32721282 -220535301 - AluSx SINE Alu -3 309 1 253 257 140 103 chr2 32721282 32721356 -220535227 + MIR SINE MIR 117 200 -62 1508 165 49 7 chr2 32721366 32721651 -220534932 + AluJb SINE Alu 1 297 -15 1741 163 0 14 chr2 32721749 32722060 -220534523 - AluSx SINE Alu 0 307 1 2126 89 7 10 chr2 32722461 32722763 -220533820 + AluY SINE Alu 1 301 -10 1996 123 0 17 chr2 32722872 32723174 -220533409 + AluSx SINE Alu 3 299 -13 849 211 0 17 chr2 32723311 32723486 -220533097 - FAM SINE Alu -3 46 1 807 161 0 29 chr2 32723701 32723838 -220532745 + FLAM_C SINE Alu 1 133 0 2078 107 0 3 chr2 32723887 32724177 -220532406 + AluSx SINE Alu 1 289 -23 1693 135 0 105 chr2 32724243 32724577 -220532006 + AluJb SINE Alu 1 299 -3 1799 111 76 3 chr2 32724578 32724867 -220531716 + AluSx SINE Alu 2 311 -1 23 68 0 0 chr2 32724867 32724911 -220531672 + AT_rich Low_complexity Low_complexity 1 44 0 548 112 9 47 chr2 32724924 32725031 -220531552 + L1MA4 LINE L1 6194 6296 -4 2056 96 7 13 chr2 32725051 32725354 -220531229 - AluSx SINE Alu -11 301 1 317 260 55 0 chr2 32725388 32725461 -220531122 + L1ME LINE L1 5601 5677 -444 1904 137 3 0 chr2 32725576 32725868 -220530715 - AluSx SINE Alu -19 293 1 2348 71 0 0 chr2 32725974 32726283 -220530300 + AluY SINE Alu 1 309 -2 2102 68 0 83 chr2 32726288 32726612 -220529971 + AluSg SINE Alu 2 298 -12 2182 160 87 112 chr2 32726685 32726779 -220529804 + MER68 LTR ERV1 1 96 -466 2198 66 0 69 chr2 32726779 32727098 -220529485 - AluY SINE Alu -14 297 1 2182 160 87 112 chr2 32727098 32727118 -220529465 + MER68 LTR ERV1 96 115 -447 1809 101 4 8 chr2 32727118 32727376 -220529207 + AluSg SINE Alu 29 285 -25 2182 160 87 112 chr2 32727376 32727425 -220529158 + MER68 LTR ERV1 115 164 -398 1611 172 0 0 chr2 32727425 32727737 -220528846 - AluJb SINE Alu 0 312 1 2182 160 87 112 chr2 32727737 32728071 -220528512 + MER68 LTR ERV1 164 488 -74 1556 128 0 0 chr2 32728071 32728297 -220528286 + AluSg/x SINE Alu 69 294 -16 2182 160 87 112 chr2 32728297 32728369 -220528214 + MER68 LTR ERV1 488 560 -2 185 133 33 0 chr2 32728399 32728429 -220528154 - L2 LINE L2 -92 3221 3191 1506 180 0 44 chr2 32728532 32728826 -220527757 + AluJb SINE Alu 1 281 -31 978 78 0 0 chr2 32728829 32728957 -220527626 - AluSc SINE Alu -14 295 168 2359 70 3 0 chr2 32729251 32729551 -220527032 - AluSp SINE Alu -12 301 1 23 78 0 0 chr2 32729583 32729634 -220526949 + AT_rich Low_complexity Low_complexity 1 51 0 236 75 0 25 chr2 32729876 32729916 -220526667 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 901 196 0 6 chr2 32729918 32730081 -220526502 - AluSg/x SINE Alu -31 281 120 1794 138 0 40 chr2 32730089 32730225 -220526358 + AluSx SINE Alu 1 141 -182 2215 103 0 0 chr2 32730225 32730535 -220526048 + AluSq SINE Alu 1 310 -3 1794 138 0 40 chr2 32730535 32730733 -220525850 + AluSx SINE Alu 141 323 0 672 191 0 0 chr2 32730749 32730875 -220525708 + FRAM SINE Alu 41 166 -10 554 198 11 126 chr2 32730905 32731008 -220525575 + Charlie8 DNA MER1_type 116 191 -150 1760 164 7 3 chr2 32731008 32731306 -220525277 + AluJb SINE Alu 1 299 -13 554 198 11 126 chr2 32731306 32731384 -220525199 + Charlie8 DNA MER1_type 191 276 -65 26 30 0 0 chr2 32731798 32731831 -220524752 + AT_rich Low_complexity Low_complexity 1 33 0 635 186 110 0 chr2 32732224 32732342 -220524241 - FLAM_A SINE Alu 0 133 3 1474 174 3 48 chr2 32732984 32733278 -220523305 + AluJb SINE Alu 1 281 -31 1977 127 0 13 chr2 32733445 32733745 -220522838 - AluSx SINE Alu -16 296 1 1504 272 53 30 chr2 32733863 32734397 -220522186 + MLT1H LTR MaLR 1 593 0 202 252 87 68 chr2 32734430 32734533 -220522050 - L2 LINE L2 -17 3296 3192 2122 103 7 3 chr2 32734686 32734988 -220521595 + AluSg SINE Alu 1 303 -7 1717 164 0 38 chr2 32735198 32735342 -220521241 + AluJb SINE Alu 1 149 -163 2077 91 3 14 chr2 32735342 32735638 -220520945 + AluSc SINE Alu 9 301 -8 1717 164 0 38 chr2 32735638 32735811 -220520772 + AluJb SINE Alu 149 306 -6 21 36 0 0 chr2 32735843 32735871 -220520712 + AT_rich Low_complexity Low_complexity 1 28 0 694 188 0 62 chr2 32735871 32736015 -220520568 + FLAM_C SINE Alu 3 137 -6 36 23 0 0 chr2 32736018 32736061 -220520522 + AT_rich Low_complexity Low_complexity 1 43 0 286 305 116 0 chr2 32736119 32736214 -220520369 - MIR SINE MIR -151 111 6 497 245 36 0 chr2 32736306 32736445 -220520138 + L1ME3A LINE L1 5727 5870 -300 771 164 17 0 chr2 32736457 32736573 -220520010 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 32736578 32736611 -220519972 + AT_rich Low_complexity Low_complexity 1 33 0 2300 75 3 0 chr2 32736939 32737232 -220519351 - AluSp SINE Alu -19 294 1 1750 136 7 35 chr2 32737271 32737581 -220519002 - AluSx SINE Alu -11 301 1 920 117 0 7 chr2 32737726 32737863 -220518720 + AluJo SINE Alu 6 141 -171 1832 132 3 26 chr2 32737863 32738166 -220518417 + AluJb SINE Alu 5 300 -12 232 218 13 13 chr2 32738340 32738418 -220518165 + GA-rich Low_complexity Low_complexity 1 78 0 1196 92 0 6 chr2 32738953 32739126 -220517457 - AluSg/x SINE Alu -10 302 131 27 49 0 0 chr2 32739846 32739887 -220516696 + GC_rich Low_complexity Low_complexity 1 41 0 2267 88 0 0 chr2 32740952 32741246 -220515337 - AluSg SINE Alu -16 294 1 203 215 92 0 chr2 32741249 32741314 -220515269 - MIR SINE MIR -6 256 186 409 223 10 29 chr2 32741356 32741459 -220515124 - MIR SINE MIR -71 191 91 2049 130 3 3 chr2 32741899 32742198 -220514385 - AluSx SINE Alu -9 303 5 2219 117 0 0 chr2 32742316 32742607 -220513976 + AluSg SINE Alu 1 291 -19 2011 137 10 13 chr2 32742620 32742933 -220513650 + AluJo SINE Alu 1 312 0 2272 112 0 0 chr2 32742986 32743290 -220513293 - AluSx SINE Alu -8 304 1 31 0 0 0 chr2 32743553 32743584 -220512999 + AT_rich Low_complexity Low_complexity 1 31 0 569 171 29 48 chr2 32743584 32743689 -220512894 - AluJo SINE Alu -21 291 189 259 188 0 0 chr2 32743689 32743737 -220512846 - AluJo SINE Alu -170 132 85 2682 45 0 0 chr2 32743895 32744205 -220512378 - AluY SINE Alu 0 311 2 2212 111 0 7 chr2 32744254 32744552 -220512031 - AluSx SINE Alu -16 296 1 1117 116 12 6 chr2 32744673 32744837 -220511746 + AluSq SINE Alu 134 298 -15 2049 136 0 10 chr2 32744856 32745164 -220511419 + AluSx SINE Alu 1 305 -7 2369 81 0 10 chr2 32745480 32745787 -220510796 - AluY SINE Alu -7 304 1 2241 110 0 7 chr2 32745997 32746296 -220510287 - AluSx SINE Alu -15 297 1 992 230 0 5 chr2 32746572 32746776 -220509807 - AluJo SINE Alu -26 286 84 5238 140 46 27 chr2 32747368 32747962 -220508621 - MER4D LTR ERV1 -1 902 284 2395 84 0 3 chr2 32747962 32748271 -220508312 - AluY SINE Alu -3 308 1 5238 140 46 27 chr2 32748271 32748560 -220508023 - MER4D LTR ERV1 -619 284 2 810 174 0 0 chr2 32749129 32749261 -220507322 - AluSq/x SINE Alu -181 132 1 787 164 9 0 chr2 32749440 32749556 -220507027 - FLAM_C SINE Alu -25 118 2 2414 185 154 28 chr2 32749881 32750426 -220506157 - MER90 LTR ERV1 0 614 1 2191 130 0 3 chr2 32750428 32750735 -220505848 - AluSx SINE Alu -6 306 1 184 45 0 0 chr2 32750822 32750844 -220505739 + MIR SINE MIR 87 108 -154 205 194 28 0 chr2 32750871 32750907 -220505676 + L2 LINE L2 3218 3254 -18 2492 69 0 19 chr2 32751069 32751386 -220505197 + AluY SINE Alu 1 311 0 2159 116 3 13 chr2 32751469 32751779 -220504804 - AluSx SINE Alu -3 309 3 2245 125 0 0 chr2 32751825 32752129 -220504454 - AluSx SINE Alu -8 304 1 784 217 0 0 chr2 32752319 32752448 -220504135 - FLAM_C SINE Alu -12 131 3 635 210 0 0 chr2 32752689 32752789 -220503794 - FLAM_A SINE Alu -42 100 1 2372 99 0 0 chr2 32752800 32753102 -220503481 - AluSg SINE Alu -8 302 1 355 357 0 0 chr2 32753460 32753572 -220503011 - MIR SINE MIR -63 145 34 1564 177 13 57 chr2 32753781 32753887 -220502696 + AluJo SINE Alu 3 112 -200 2167 13 0 0 chr2 32753887 32754161 -220502422 - AluYa5 SINE Alu 0 311 58 1564 177 13 57 chr2 32754161 32754172 -220502411 + AluJo SINE Alu 112 122 -190 1543 129 0 17 chr2 32754172 32754404 -220502179 - AluSx SINE Alu -84 228 1 1564 177 13 57 chr2 32754404 32754585 -220501998 + AluJo SINE Alu 122 289 -23 1406 183 56 12 chr2 32754813 32755065 -220501518 - AluJb SINE Alu -45 267 5 1666 161 46 7 chr2 32755163 32755443 -220501140 + AluJb SINE Alu 1 291 -21 1329 174 24 12 chr2 32755494 32755741 -220500842 - AluJb SINE Alu -17 295 46 2387 152 63 11 chr2 32755775 32756226 -220500357 - L1M3 LINE L1 -428 5752 5281 273 288 15 0 chr2 32756280 32756346 -220500237 - MER58A DNA MER1_type -34 73 7 2116 129 0 22 chr2 32756712 32756890 -220499693 - AluY SINE Alu -1 310 141 2176 112 0 3 chr2 32756890 32757184 -220499399 - AluSg SINE Alu -16 294 2 2116 129 0 22 chr2 32757184 32757322 -220499261 - AluY SINE Alu -170 141 1 1851 90 8 4 chr2 32757494 32757738 -220498845 + AluSc SINE Alu 63 307 -2 1910 104 77 11 chr2 32757934 32758221 -220498362 - AluSq SINE Alu -7 306 1 2273 92 3 3 chr2 32758343 32758637 -220497946 + AluSp SINE Alu 2 295 -18 2161 200 45 58 chr2 32758642 32758865 -220497718 - L1ME1 LINE L1 -209 5957 5733 198 71 0 0 chr2 32758865 32758893 -220497690 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2161 200 45 58 chr2 32758893 32758908 -220497675 - L1ME1 LINE L1 -433 5733 5719 2031 103 52 0 chr2 32758908 32759180 -220497403 - AluSg SINE Alu -20 290 5 2161 200 45 58 chr2 32759180 32759561 -220497022 - L1ME1 LINE L1 -447 5719 5345 601 66 0 41 chr2 32759584 32759706 -220496877 + (TA)n Simple_repeat Simple_repeat 1 117 0 2070 119 3 23 chr2 32759706 32760008 -220496575 - AluSx SINE Alu -16 296 1 302 252 38 54 chr2 32760069 32760088 -220496495 + L1MC/D LINE L1 5616 5634 -541 2152 68 39 14 chr2 32760088 32760392 -220496191 - AluY SINE Alu 0 311 1 302 252 38 54 chr2 32760392 32760532 -220496051 + L1MC/D LINE L1 5634 5768 -407 2310 108 0 7 chr2 32760532 32760839 -220495744 + AluSx SINE Alu 1 305 -7 1464 215 3 37 chr2 32761125 32761446 -220495137 - AluJb SINE Alu -2 310 1 2070 88 0 25 chr2 32761683 32761968 -220494615 + AluSg SINE Alu 1 278 -32 270 0 0 0 chr2 32761968 32761998 -220494585 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1792 159 7 26 chr2 32762104 32762406 -220494177 + AluJo SINE Alu 1 296 -16 2067 112 27 10 chr2 32762409 32762704 -220493879 + AluSx SINE Alu 1 300 -12 195 42 0 0 chr2 32763573 32763597 -220492986 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1735 163 0 66 chr2 32763613 32763790 -220492793 - AluJo SINE Alu -2 310 123 285 29 0 0 chr2 32763790 32763824 -220492759 + (TTA)n Simple_repeat Simple_repeat 1 34 0 1973 130 0 14 chr2 32763825 32764109 -220492474 - AluSx SINE Alu -25 287 8 1735 163 0 66 chr2 32764109 32764261 -220492322 - AluJo SINE Alu -188 124 1 2317 103 3 0 chr2 32764291 32764593 -220491990 + AluSp SINE Alu 1 303 -10 333 210 175 7 chr2 32764595 32764738 -220491845 - HsTC2 DNA Tc2 -2 1896 1730 622 260 23 23 chr2 32764744 32764917 -220491666 - HsTC2 DNA Tc2 -1722 176 4 1235 171 133 38 chr2 32765002 32765265 -220491318 - AluJb SINE Alu -14 288 1 269 248 0 90 chr2 32765641 32765696 -220490887 - L1MC5 LINE L1 -36 7925 7867 2288 88 0 3 chr2 32765696 32765992 -220490591 - AluY SINE Alu -16 295 1 269 248 0 90 chr2 32765992 32766069 -220490514 - L1MC5 LINE L1 -94 7867 7805 960 233 48 0 chr2 32766070 32766276 -220490307 + MER58A DNA MER1_type 1 216 -8 1076 200 133 78 chr2 32766292 32766933 -220489650 - L1MC5 LINE L1 -160 7801 7126 211 324 0 0 chr2 32767105 32767173 -220489410 + MIR SINE MIR 79 146 -62 1835 112 20 0 chr2 32767174 32767478 -220489105 - AluSq SINE Alu 0 336 28 2435 69 0 7 chr2 32767479 32767783 -220488800 + AluY SINE Alu 1 302 -9 305 107 0 0 chr2 32767801 32767858 -220488725 - AluSq SINE Alu -259 40 2 2135 109 7 3 chr2 32768654 32768948 -220487635 + AluSx SINE Alu 1 295 -17 2391 58 0 32 chr2 32768949 32769262 -220487321 + AluYa5 SINE Alu 2 304 -7 1053 169 0 0 chr2 32769262 32769428 -220487155 + AluSg/x SINE Alu 133 298 -12 562 246 82 69 chr2 32769436 32769668 -220486915 + L2 LINE L2 3078 3312 -1 209 328 0 0 chr2 32769677 32769735 -220486848 + L2 LINE L2 3210 3267 -5 24 0 0 0 chr2 32769741 32769765 -220486818 + AT_rich Low_complexity Low_complexity 1 24 0 1101 105 0 0 chr2 32770150 32770293 -220486290 - AluSg/x SINE Alu -15 295 153 1485 245 80 51 chr2 32770303 32770616 -220485967 - L2 LINE L2 -234 3079 2725 2181 105 3 10 chr2 32770616 32770912 -220485671 + AluSx SINE Alu 1 294 -18 1485 245 80 51 chr2 32770912 32771152 -220485431 - L2 LINE L2 -588 2725 2493 1839 167 0 22 chr2 32771378 32771690 -220484893 + AluJo SINE Alu 1 305 -7 378 277 30 77 chr2 32771750 32771985 -220484598 - L2 LINE L2 -440 2874 2651 2220 112 0 0 chr2 32772083 32772379 -220484204 + AluSx SINE Alu 3 298 -14 2278 101 0 16 chr2 32773610 32773926 -220482657 - AluY SINE Alu 0 311 1 1620 167 19 4 chr2 32774113 32774383 -220482200 + AluJo SINE Alu 2 275 -37 27 49 0 0 chr2 32774550 32774591 -220481992 + AT_rich Low_complexity Low_complexity 1 41 0 211 220 0 0 chr2 32774656 32774706 -220481877 + T-rich Low_complexity Low_complexity 1 50 0 1959 122 104 6 chr2 32775461 32775788 -220480795 - L1MA5A LINE L1 -1 6296 5938 2918 98 16 5 chr2 32775791 32776219 -220480364 - L1MA5A LINE L1 -491 5806 5374 41230 69 7 4 chr2 32776396 32782511 -220474072 - L1PA5 LINE L1 -7 6147 11 1384 139 20 62 chr2 32783111 32783168 -220473415 + MER46A DNA MER2_type 1 59 -2672 1883 135 0 64 chr2 32783168 32783480 -220473103 - AluSx SINE Alu -20 292 1 1384 139 20 62 chr2 32783480 32783666 -220472917 + MER46A DNA MER2_type 59 234 -2 981 205 139 21 chr2 32783882 32784273 -220472310 + L1M4b LINE L1 1339 1760 -5095 315 283 33 0 chr2 32784348 32784440 -220472143 + L1ME1 LINE L1 6026 6120 -46 328 135 0 0 chr2 32784448 32784500 -220472083 - AluJb SINE Alu -7 295 244 1036 170 6 0 chr2 32784507 32784678 -220471905 - AluJb SINE Alu -140 172 1 2217 102 7 3 chr2 32784686 32784989 -220471594 - AluSc SINE Alu -5 304 1 2132 122 7 0 chr2 32785040 32785336 -220471247 - AluSx SINE Alu -14 298 1 225 247 36 109 chr2 32785346 32785593 -220470990 - HAL1 LINE L1 -48 2459 2231 21 36 0 0 chr2 32785593 32785621 -220470962 + AT_rich Low_complexity Low_complexity 1 28 0 491 215 0 18 chr2 32785649 32785812 -220470771 + (TA)n Simple_repeat Simple_repeat 1 160 0 241 170 21 106 chr2 32785814 32785908 -220470675 + L1MC4 LINE L1 6615 6700 -1342 236 217 0 12 chr2 32785939 32786022 -220470561 + (TA)n Simple_repeat Simple_repeat 1 82 0 2271 103 3 3 chr2 32786034 32786344 -220470239 - AluSg SINE Alu 0 310 1 559 62 0 110 chr2 32786416 32786792 -220469791 + (TA)n Simple_repeat Simple_repeat 1 334 0 265 136 60 87 chr2 32786824 32787008 -220469575 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 * 361 124 0 114 chr2 32786988 32787189 -220469394 + (TA)n Simple_repeat Simple_repeat 1 178 0 270 110 55 71 chr2 32787210 32787392 -220469191 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 227 229 92 28 chr2 32787592 32787701 -220468882 - L1MDa LINE L1 -4501 2039 1924 40 37 0 0 chr2 32787842 32787896 -220468687 + AT_rich Low_complexity Low_complexity 1 54 0 387 0 0 0 chr2 32787898 32787941 -220468642 + (TAG)n Simple_repeat Simple_repeat 1 43 0 1629 138 0 0 chr2 32787956 32788180 -220468403 - AluSx SINE Alu -88 224 1 388 129 0 0 chr2 32788180 32788242 -220468341 - L1MA1 LINE L1 -182 6120 6059 2275 114 0 0 chr2 32788274 32788573 -220468010 - AluSg SINE Alu -11 299 1 1370 141 173 0 chr2 32789063 32789312 -220467271 - AluJb SINE Alu -20 292 1 2312 108 0 3 chr2 32789488 32789793 -220466790 - AluSx SINE Alu -7 305 2 1133 108 0 0 chr2 32789860 32790018 -220466565 - AluSc SINE Alu 0 309 152 1499 159 51 48 chr2 32790050 32790345 -220466238 + AluJo SINE Alu 1 296 -16 26 50 0 0 chr2 32790444 32790484 -220466099 + AT_rich Low_complexity Low_complexity 1 40 0 2363 59 39 0 chr2 32790885 32791171 -220465412 - AluSp SINE Alu -12 301 5 28 29 0 0 chr2 32791283 32791318 -220465265 + AT_rich Low_complexity Low_complexity 1 35 0 27 49 0 0 chr2 32791784 32791825 -220464758 + AT_rich Low_complexity Low_complexity 1 41 0 1900 166 0 17 chr2 32792392 32792694 -220463889 - AluSx SINE Alu -15 297 1 1105 139 6 0 chr2 32792738 32792904 -220463679 + AluSg/x SINE Alu 124 290 -20 2362 76 20 10 chr2 32792906 32793210 -220463373 + AluSc SINE Alu 1 307 -2 24 0 0 0 chr2 32793213 32793237 -220463346 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr2 32793388 32793413 -220463170 + AT_rich Low_complexity Low_complexity 1 25 0 2003 159 0 0 chr2 32793456 32793758 -220462825 - AluSq SINE Alu -10 303 2 252 232 0 63 chr2 32794151 32794246 -220462337 + MER113 DNA MER1_type? 6 94 -427 347 274 145 8 chr2 32794514 32794638 -220461945 - MIR3 SINE MIR -8 200 60 507 168 88 18 chr2 32795942 32796055 -220460528 - FLAM_A SINE Alu 0 142 22 1144 256 78 44 chr2 32796313 32797045 -220459538 - HAL1 LINE L1 -379 2128 1372 2027 96 44 0 chr2 32797097 32797368 -220459215 - AluSq SINE Alu -30 283 1 2339 97 0 10 chr2 32797463 32797771 -220458812 - AluSx SINE Alu -7 305 1 727 308 60 39 chr2 32797771 32798203 -220458380 - HAL1 LINE L1 -1484 1023 583 2288 121 0 0 chr2 32798241 32798547 -220458036 - AluSx SINE Alu -4 308 3 816 148 0 23 chr2 32798590 32798718 -220457865 + FLAM_C SINE Alu 6 130 -13 5670 187 29 22 chr2 32798726 32798909 -220457674 + L1MC2 LINE L1 4199 4379 -1965 2404 82 0 0 chr2 32798909 32799201 -220457382 + AluSx SINE Alu 2 293 -19 5670 187 29 22 chr2 32799201 32801135 -220455448 + L1MC2 LINE L1 4379 6331 -13 2302 98 3 13 chr2 32801135 32801450 -220455133 - AluSp SINE Alu 0 313 2 411 292 105 50 chr2 32801541 32801718 -220454865 - HAL1 LINE L1 -1970 537 371 2258 55 0 34 chr2 32801718 32802032 -220454551 - AluY SINE Alu 0 304 1 411 292 105 50 chr2 32802032 32802357 -220454226 - HAL1 LINE L1 -2136 371 6 1862 161 9 25 chr2 32802397 32802713 -220453870 - AluJb SINE Alu -1 311 1 213 0 81 0 chr2 32803068 32803105 -220453478 + T-rich Low_complexity Low_complexity 1 40 0 1618 146 0 0 chr2 32803106 32803345 -220453238 - AluSx SINE Alu -73 239 1 2101 141 6 6 chr2 32803910 32804222 -220452361 - AluSx SINE Alu 0 312 1 2135 163 87 18 chr2 32804592 32805029 -220451554 - MLT1C LTR MaLR 0 467 1 846 140 7 29 chr2 32805180 32805316 -220451267 - FLAM_C SINE Alu 0 133 1 2025 139 3 3 chr2 32805644 32805938 -220450645 + AluJb SINE Alu 1 294 -18 1702 179 7 3 chr2 32805945 32806241 -220450342 + AluJo SINE Alu 5 301 -11 2348 102 0 0 chr2 32806364 32806667 -220449916 + AluSx SINE Alu 1 303 -9 370 310 99 107 chr2 32807052 32807436 -220449147 + L2 LINE L2 2886 3266 -6 345 270 71 40 chr2 32807441 32807567 -220449016 - MIR SINE MIR -95 167 38 2117 96 45 0 chr2 32807594 32807886 -220448697 - AluSc SINE Alu -4 305 1 2003 149 0 10 chr2 32808035 32808343 -220448240 + AluJb SINE Alu 1 305 -7 229 307 339 7 chr2 32808354 32808628 -220447955 - L3 LINE CR1 -160 1417 1053 1874 76 30 142 chr2 32808655 32808985 -220447598 + AluSp SINE Alu 2 294 -19 873 254 34 65 chr2 32809155 32809510 -220447073 - L1ME3A LINE L1 -2 6168 5825 200 299 15 0 chr2 32809731 32809798 -220446785 + L2 LINE L2 3173 3240 -73 1727 132 3 107 chr2 32809972 32810148 -220446435 - AluJb SINE Alu -10 292 164 1830 90 0 4 chr2 32810148 32810382 -220446201 + AluSg SINE Alu 1 233 -77 1727 132 3 107 chr2 32810382 32810531 -220446052 - AluJb SINE Alu -138 164 1 357 263 86 59 chr2 32810595 32810627 -220445956 + MIR3 SINE MIR 34 64 -144 2203 108 0 3 chr2 32810627 32810923 -220445660 - AluSx SINE Alu -17 295 1 357 263 86 59 chr2 32810923 32811042 -220445541 + MIR3 SINE MIR 64 189 -19 270 0 0 0 chr2 32811046 32811076 -220445507 + (TG)n Simple_repeat Simple_repeat 1 30 0 2360 54 0 0 chr2 32811076 32811356 -220445227 - AluY SINE Alu -31 280 1 686 133 0 0 chr2 32811598 32811696 -220444887 + AluSq SINE Alu 1 98 -214 1515 133 5 0 chr2 32811816 32812034 -220444549 + AluSq SINE Alu 94 312 -1 460 259 80 14 chr2 32813435 32813647 -220442936 - HAL1b LINE L1 -750 598 373 4156 149 41 37 chr2 32813682 32815192 -220441391 - L1PA16 LINE L1 -104 6062 4544 1512 226 0 41 chr2 32815192 32815473 -220441110 + L1 LINE L1 4136 4394 -1752 2389 82 0 16 chr2 32815473 32815790 -220440793 + AluSx SINE Alu 1 312 0 1512 226 0 41 chr2 32815790 32815945 -220440638 + L1 LINE L1 4394 4554 -1592 1599 137 29 4 chr2 32816321 32816562 -220440021 + AluSx SINE Alu 54 300 -12 613 156 74 25 chr2 32816568 32816690 -220439893 + AluJb SINE Alu 1 128 -184 42 0 0 0 chr2 32816696 32816738 -220439845 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr2 32816871 32816894 -220439689 + AT_rich Low_complexity Low_complexity 1 23 0 240 150 0 0 chr2 32817918 32817958 -220438625 - L1M4 LINE L1 -1584 4562 4523 * 1675 234 50 27 chr2 32817955 32818334 -220438249 + L1ME1 LINE L1 5551 5951 -215 2017 93 62 7 chr2 32818334 32818623 -220437960 - AluSc SINE Alu -4 305 1 1675 234 50 27 chr2 32818623 32818841 -220437742 + L1ME1 LINE L1 5951 6162 -4 1961 146 7 10 chr2 32818913 32819214 -220437369 + AluJo SINE Alu 3 302 -10 23 68 0 0 chr2 32819375 32819419 -220437164 + AT_rich Low_complexity Low_complexity 1 44 0 228 145 18 2 chr2 32819637 32819803 -220436780 + AluJb SINE Alu 86 290 -12 37 23 0 0 chr2 32819885 32819929 -220436654 + AT_rich Low_complexity Low_complexity 1 44 0 1990 128 17 10 chr2 32820531 32820820 -220435763 + AluSp SINE Alu 1 291 -22 1984 135 3 20 chr2 32821021 32821324 -220435259 - AluJb SINE Alu -14 298 1 294 167 0 0 chr2 32821326 32821374 -220435209 - MER58 DNA MER1_type -133 82 35 1654 173 0 33 chr2 32822204 32822510 -220434073 + AluJo SINE Alu 1 296 -16 2280 84 44 0 chr2 32822512 32822808 -220433775 + AluSg SINE Alu 1 309 -1 225 0 0 0 chr2 32823273 32823298 -220433285 + (T)n Simple_repeat Simple_repeat 1 25 0 1644 131 25 0 chr2 32823307 32823544 -220433039 - AluSx SINE Alu -69 243 1 2365 57 0 0 chr2 32823546 32823858 -220432725 - AluY SINE Alu 0 312 1 1570 176 4 11 chr2 32823858 32824136 -220432447 - AluJb SINE Alu -11 301 26 2247 100 0 17 chr2 32824317 32824455 -220432128 + AluSx SINE Alu 1 140 -172 2429 54 0 7 chr2 32824455 32824753 -220431830 + AluY SINE Alu 1 296 -15 2247 100 0 17 chr2 32824753 32824914 -220431669 + AluSx SINE Alu 140 295 -17 2078 100 3 41 chr2 32825006 32825325 -220431258 - AluSx SINE Alu -5 307 1 1894 152 52 6 chr2 32825471 32825800 -220430783 - MER2 DNA MER2_type 0 344 1 2190 84 0 75 chr2 32825986 32826318 -220430265 - AluSc SINE Alu -2 307 1 252 77 0 0 chr2 32826341 32826380 -220430203 + (TTTAA)n Simple_repeat Simple_repeat 3 41 0 1679 173 25 0 chr2 32826380 32826658 -220429925 - AluJo SINE Alu -27 285 1 2241 89 7 0 chr2 32826879 32827170 -220429413 - AluSp SINE Alu -20 293 1 269 196 59 0 chr2 32827262 32827313 -220429270 + MIR SINE MIR 188 241 -21 2255 102 0 7 chr2 32827555 32827860 -220428723 + AluSx SINE Alu 1 303 -9 1764 140 54 7 chr2 32828213 32828492 -220428091 + AluJb SINE Alu 1 292 -20 1959 153 0 3 chr2 32828682 32828976 -220427607 - AluJb SINE Alu -19 293 1 2299 77 34 3 chr2 32829246 32829543 -220427040 - AluSq SINE Alu -7 306 1 1691 116 0 0 chr2 32829722 32829946 -220426637 + AluSx SINE Alu 1 224 -88 334 183 161 11 chr2 32829948 32830041 -220426542 + L1ME4a LINE L1 6012 6118 -3 2508 61 7 0 chr2 32831968 32832264 -220424319 - AluSp SINE Alu -15 298 1 443 322 60 48 chr2 32833654 32833761 -220422822 + L1ME LINE L1 406 510 -5906 1304 184 53 70 chr2 32833761 32834060 -220422523 + AluJo SINE Alu 1 294 -18 443 322 60 48 chr2 32834060 32834415 -220422168 + L1ME LINE L1 510 874 -5542 2207 99 22 2 chr2 32834920 32835513 -220421070 + AluY SINE Alu 1 286 -25 772 258 111 37 chr2 32835513 32836109 -220420474 + L1ME LINE L1 1212 1851 -4756 734 153 91 34 chr2 32836110 32836286 -220420297 + AluJb SINE Alu 1 186 -126 262 300 44 0 chr2 32836312 32836402 -220420181 + L1ME LINE L1 1758 1851 -4575 690 284 79 17 chr2 32836475 32836891 -220419692 + L1ME LINE L1 1957 2398 -4209 773 143 31 62 chr2 32837002 32837163 -220419420 - FRAM SINE Alu -20 156 1 1139 214 46 0 chr2 32837197 32837435 -220419148 - MER68 LTR ERV1 -10 552 304 579 154 77 8 chr2 32837446 32837563 -220419020 - MER68 LTR ERV1 -411 151 27 1511 242 81 20 chr2 32837864 32837985 -220418598 + L1MC4 LINE L1 6515 6627 -1415 2148 124 0 0 chr2 32837985 32838276 -220418307 + AluSx SINE Alu 1 291 -21 1511 242 81 20 chr2 32838276 32838427 -220418156 + L1MC4 LINE L1 6627 6767 -1275 1906 193 22 5 chr2 32838427 32838795 -220417788 - MLT1A2 LTR MaLR 0 374 1 1511 242 81 20 chr2 32838795 32839063 -220417520 + L1MC4 LINE L1 6767 7089 -953 1077 151 0 6 chr2 32839115 32839281 -220417302 + AluSx SINE Alu 1 165 -147 483 216 8 72 chr2 32839314 32839381 -220417202 + MIR SINE MIR 142 212 -50 2214 102 31 0 chr2 32839381 32839675 -220416908 - AluSg SINE Alu -7 303 1 2013 110 68 0 chr2 32839675 32839955 -220416628 - AluSq SINE Alu -13 300 1 483 216 8 72 chr2 32839955 32840011 -220416572 + MIR SINE MIR 210 258 -4 767 167 0 0 chr2 32840012 32840138 -220416445 + FLAM_C SINE Alu 1 126 -7 2104 118 3 3 chr2 32840199 32840503 -220416080 - AluSg SINE Alu -1 309 6 1362 149 175 10 chr2 32840528 32840837 -220415746 + MER46B DNA MER2_type 1 235 -1 2378 62 3 0 chr2 32841140 32841432 -220415151 - AluSx SINE Alu -18 294 2 187 206 304 11 chr2 32841435 32841527 -220415056 + MIR SINE MIR 94 212 -50 223 360 87 27 chr2 32842852 32843002 -220413581 + L2 LINE L2 2682 2840 -474 2339 76 3 0 chr2 32843002 32843303 -220413280 - AluSp SINE Alu -11 302 1 22 0 0 0 chr2 32843311 32843333 -220413250 + AT_rich Low_complexity Low_complexity 1 22 0 407 333 58 0 chr2 32843836 32843974 -220412609 + L2 LINE L2 3115 3260 -12 37 0 0 0 chr2 32844249 32844286 -220412297 + AT_rich Low_complexity Low_complexity 1 37 0 48 32 0 0 chr2 32844340 32844402 -220412181 + AT_rich Low_complexity Low_complexity 1 62 0 244 333 80 35 chr2 32844659 32844860 -220411723 - L2 LINE L2 -404 2910 2701 304 215 0 15 chr2 32845041 32845106 -220411477 - L1MC4 LINE L1 -1338 6704 6641 1555 184 23 27 chr2 32845106 32845405 -220411178 - AluJb SINE Alu -14 298 1 1453 57 0 6 chr2 32845425 32845600 -220410983 + AluY SINE Alu 1 174 -137 1928 148 0 0 chr2 32846536 32846814 -220409769 - AluSx SINE Alu -21 291 14 648 250 230 5 chr2 32846931 32847127 -220409456 + MIR SINE MIR 20 259 -3 2511 80 0 3 chr2 32847609 32847922 -220408661 - AluSp SINE Alu -1 312 1 212 323 215 0 chr2 32848055 32848148 -220408435 + L2 LINE L2 3150 3262 -10 2298 284 107 38 chr2 32848191 32848308 -220408275 + L2 LINE L2 935 1042 -2272 797 188 0 0 chr2 32848308 32848441 -220408142 - FLAM_A SINE Alu 0 133 1 2298 284 107 38 chr2 32848441 32849276 -220407307 + L2 LINE L2 1042 1953 -1361 2041 112 31 3 chr2 32849304 32849590 -220406993 - AluSg SINE Alu -14 296 3 235 256 0 13 chr2 32849620 32849698 -220406885 - L1MC4 LINE L1 -64 7978 7902 23 68 0 0 chr2 32850259 32850303 -220406280 + AT_rich Low_complexity Low_complexity 1 44 0 798 154 0 0 chr2 32850304 32850421 -220406162 - FLAM_C SINE Alu -16 117 1 2397 89 0 0 chr2 32850477 32850780 -220405803 - AluSc SINE Alu -6 303 1 669 150 144 0 chr2 32851341 32851514 -220405069 + L1MB8 LINE L1 5774 5971 -207 2035 115 18 0 chr2 32851625 32851911 -220404672 + AluSq SINE Alu 4 294 -19 464 254 65 35 chr2 32852015 32852280 -220404303 + L1MC4a LINE L1 5254 5525 -596 2291 96 0 3 chr2 32852305 32852598 -220403985 + AluSg SINE Alu 1 292 -18 810 173 113 118 chr2 32852599 32852701 -220403882 - L1MB8 LINE L1 -10 6168 6067 2248 120 0 0 chr2 32852701 32853001 -220403582 - AluSx SINE Alu -12 300 1 810 173 113 118 chr2 32853001 32853244 -220403339 - L1MB8 LINE L1 -111 6067 5825 1765 130 93 4 chr2 32853248 32853517 -220403066 - AluSx SINE Alu -16 296 4 1645 133 18 75 chr2 32853526 32853579 -220403004 - L1MB8 LINE L1 -1094 5052 4998 1468 168 113 7 chr2 32853579 32853853 -220402730 - AluSg1 SINE Alu -2 307 5 1645 133 18 75 chr2 32853853 32853873 -220402710 - L1MB8 LINE L1 -1148 4998 4978 2605 53 0 0 chr2 32853873 32854175 -220402408 - AluY SINE Alu -9 302 1 1645 133 18 75 chr2 32854175 32854320 -220402263 - L1MB8 LINE L1 -1168 4978 4864 1963 152 3 16 chr2 32854320 32854630 -220401953 + AluSx SINE Alu 1 306 -6 1645 133 18 75 chr2 32854630 32854809 -220401774 - L1MB8 LINE L1 -1282 4864 4676 1230 218 15 23 chr2 32854826 32855088 -220401495 - AluJb SINE Alu -52 260 1 696 193 135 29 chr2 32855088 32855295 -220401288 + L1MC4a LINE L1 5511 5739 -2069 804 203 61 12 chr2 32855360 32855523 -220401060 - MER5A DNA MER1_type -6 183 13 332 216 0 11 chr2 32855595 32855683 -220400900 + L1MC4a LINE L1 5873 5959 -1849 25 18 0 73 chr2 32855831 32855886 -220400697 + AT_rich Low_complexity Low_complexity 1 51 0 778 204 7 0 chr2 32855905 32856047 -220400536 + FRAM SINE Alu 1 143 -33 1747 160 16 46 chr2 32856048 32856354 -220400229 + AluJo SINE Alu 1 297 -15 2113 122 0 13 chr2 32856357 32856661 -220399922 - AluSx SINE Alu -12 300 1 577 260 28 11 chr2 32857182 32857359 -220399224 - MER104 DNA Tc2 0 180 1 2028 123 3 7 chr2 32857513 32857806 -220398777 + AluSx SINE Alu 1 292 -20 1888 166 3 10 chr2 32857852 32858166 -220398417 - AluJo SINE Alu 0 312 1 2257 93 0 0 chr2 32858836 32859125 -220397458 + AluSg SINE Alu 1 289 -21 2228 104 0 23 chr2 32859328 32859635 -220396948 + AluSx SINE Alu 1 300 -12 32 43 0 0 chr2 32860046 32860092 -220396491 + AT_rich Low_complexity Low_complexity 1 46 0 2238 117 0 0 chr2 32860413 32860711 -220395872 + AluSx SINE Alu 1 298 -14 1528 176 60 14 chr2 32861017 32861301 -220395282 + AluJo SINE Alu 1 297 -15 2102 109 0 42 chr2 32861646 32861959 -220394624 - AluSx SINE Alu -10 302 3 1240 209 8 0 chr2 32861961 32862200 -220394383 - AluSg/x SINE Alu -6 306 66 2211 103 0 20 chr2 32862334 32862635 -220393948 + AluSx SINE Alu 1 295 -17 1736 162 10 3 chr2 32862654 32862956 -220393627 + AluSx SINE Alu 9 312 0 906 316 207 14 chr2 32863479 32864187 -220392396 + L2 LINE L2 2189 3031 -282 1846 138 65 0 chr2 32864342 32864618 -220391965 + AluSx SINE Alu 1 294 -18 594 258 116 18 chr2 32864661 32865205 -220391378 - L1ME2 LINE L1 -44 6120 5630 2199 131 0 16 chr2 32865205 32865519 -220391064 - AluSx SINE Alu -3 309 1 1656 163 37 10 chr2 32865519 32865819 -220390764 - AluJo SINE Alu -4 308 1 594 258 116 18 chr2 32865819 32866095 -220390488 - L1ME2 LINE L1 -534 5630 5382 2268 111 0 0 chr2 32866095 32866392 -220390191 + AluSx SINE Alu 1 297 -15 594 258 116 18 chr2 32866392 32866589 -220389994 - L1ME2 LINE L1 -782 5382 5206 1730 112 16 4 chr2 32866589 32866840 -220389743 - AluSx SINE Alu -58 254 1 594 258 116 18 chr2 32866840 32867115 -220389468 - L1ME2 LINE L1 -958 5206 4606 548 261 100 56 chr2 32867517 32867661 -220388922 + MIR SINE MIR 2 163 -99 775 139 0 36 chr2 32867661 32867798 -220388785 + FLAM_A SINE Alu 1 132 -1 548 261 100 56 chr2 32867798 32867902 -220388681 + MIR SINE MIR 163 261 -1 259 196 0 0 chr2 32867986 32868032 -220388551 - LTR51 LTR ERV1 -49 622 577 21 0 0 0 chr2 32868806 32868827 -220387756 + AT_rich Low_complexity Low_complexity 1 21 0 768 123 0 0 chr2 32869232 32869338 -220387245 + FLAM_C SINE Alu 24 129 -14 577 228 144 50 chr2 32870867 32871016 -220385567 - L1ME4a LINE L1 -70 6051 5918 1745 104 123 8 chr2 32871016 32871284 -220385299 - AluSg1 SINE Alu -10 299 1 577 228 144 50 chr2 32871284 32871599 -220384984 - L1ME4a LINE L1 -203 5918 5543 837 162 0 14 chr2 32871618 32871760 -220384823 - FLAM_C SINE Alu -3 140 1 733 200 0 0 chr2 32871822 32871947 -220384636 + FLAM_A SINE Alu 1 125 -8 2170 118 7 7 chr2 32871951 32872256 -220384327 + AluSq SINE Alu 1 305 -8 329 203 165 0 chr2 32872293 32872372 -220384211 - MIR SINE MIR -16 246 155 1043 198 19 0 chr2 32872422 32872634 -220383949 - MER46A DNA MER2_type -1 235 20 2258 93 3 0 chr2 32872698 32872989 -220383594 + AluSq SINE Alu 2 293 -20 22 0 0 0 chr2 32873170 32873192 -220383391 + AT_rich Low_complexity Low_complexity 1 22 0 195 301 65 24 chr2 32873801 32873924 -220382659 + MIR3 SINE MIR 35 162 -46 1953 102 0 0 chr2 32874511 32874756 -220381827 - AluSq SINE Alu -22 291 47 2301 166 50 38 chr2 32874798 32875321 -220381262 - L1MB3 LINE L1 -55 6128 5600 1818 79 54 4 chr2 32875335 32875614 -220380969 - L1MA3 LINE L1 0 6305 6013 21 0 0 0 chr2 32875730 32875751 -220380832 + AT_rich Low_complexity Low_complexity 1 21 0 1600 128 0 0 chr2 32875751 32875970 -220380613 + AluSx SINE Alu 1 219 -93 205 224 12 12 chr2 32875974 32876059 -220380524 + (TA)n Simple_repeat Simple_repeat 2 86 0 217 358 81 64 chr2 32876063 32876265 -220380318 + L2 LINE L2 2544 2755 -559 4517 22 41 0 chr2 32876265 32876781 -220379802 + SVA Other Other 863 1398 0 217 358 81 64 chr2 32876781 32876873 -220379710 + L2 LINE L2 2755 2844 -470 2059 77 52 7 chr2 32878250 32878549 -220378034 - AluY SINE Alu 0 311 1 33 0 0 23 chr2 32880701 32880730 -220375853 + AT_rich Low_complexity Low_complexity 1 30 -13 1841 176 7 3 chr2 32880730 32881032 -220375551 - AluJb SINE Alu -9 303 1 33 0 0 23 chr2 32881032 32881046 -220375537 + AT_rich Low_complexity Low_complexity 30 43 0 2271 85 3 7 chr2 32881058 32881351 -220375232 + AluSg SINE Alu 1 292 -18 2168 126 0 7 chr2 32881579 32881889 -220374694 - AluSx SINE Alu -4 308 1 2308 73 17 0 chr2 32882085 32882372 -220374211 + AluY SINE Alu 1 292 -19 2085 83 6 80 chr2 32883141 32883298 -220373285 - AluSc SINE Alu -20 289 122 2258 105 3 0 chr2 32883298 32883593 -220372990 - AluSg SINE Alu -14 296 1 2085 83 6 80 chr2 32883593 32883612 -220372971 - AluSc SINE Alu -187 122 103 2431 85 3 0 chr2 32883612 32883918 -220372665 - AluSg SINE Alu -3 307 1 2085 83 6 80 chr2 32883918 32884052 -220372531 - AluSc SINE Alu -206 103 1 2275 114 0 0 chr2 32884054 32884351 -220372232 - AluSx SINE Alu -15 297 1 24 0 0 0 chr2 32884359 32884383 -220372200 + AT_rich Low_complexity Low_complexity 1 24 0 832 128 0 0 chr2 32884383 32884500 -220372083 - FLAM_C SINE Alu -16 117 1 295 145 0 72 chr2 32884511 32884580 -220372003 - Alu SINE Alu -5 297 234 909 136 21 14 chr2 32884591 32884731 -220371852 - AluSq/x SINE Alu -171 141 1 550 172 0 0 chr2 32885641 32885734 -220370849 - FLAM SINE Alu -13 130 38 238 214 271 0 chr2 32886042 32886112 -220370471 - L1ME4a LINE L1 -47 6074 5986 2330 105 3 13 chr2 32886147 32886462 -220370121 + AluSx SINE Alu 1 312 0 268 223 106 21 chr2 32886462 32886556 -220370027 - L1ME4a LINE L1 -202 5919 5818 2239 145 31 41 chr2 32886758 32887173 -220369410 - LTR57 LTR ERVL 0 411 1 569 303 60 25 chr2 32887183 32887497 -220369086 - HAL1b LINE L1 -740 608 284 2311 108 0 6 chr2 32887519 32887833 -220368750 - AluSx SINE Alu 0 312 1 337 312 77 69 chr2 32887894 32888298 -220368285 - HAL1 LINE L1 -1222 1285 879 2143 119 13 16 chr2 32888497 32888807 -220367776 - AluSx SINE Alu -2 310 2 1799 152 13 23 chr2 32888808 32889111 -220367472 - AluJo SINE Alu -12 300 1 346 293 57 0 chr2 32889577 32889700 -220366883 - L1ME4a LINE L1 -295 5826 5697 1063 108 0 0 chr2 32889700 32889839 -220366744 - AluSg SINE Alu -4 308 170 690 100 0 0 chr2 32889839 32889964 -220366619 + ALR/Alpha Satellite centromeric 1 125 -65 1153 120 0 34 chr2 32889964 32890139 -220366444 - AluSg SINE Alu -141 169 1 382 279 29 0 chr2 32890139 32890279 -220366304 - L1ME4a LINE L1 -415 5706 5563 27 0 0 0 chr2 32890334 32890361 -220366222 + AT_rich Low_complexity Low_complexity 1 27 0 831 85 0 0 chr2 32890361 32890467 -220366116 - U6 snRNA snRNA -1 106 1 1989 157 0 6 chr2 32891086 32891399 -220365184 - AluJb SINE Alu -1 311 1 38 0 0 0 chr2 32891402 32891440 -220365143 + AT_rich Low_complexity Low_complexity 1 38 0 191 86 0 29 chr2 32891584 32891619 -220364964 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1109 209 50 0 chr2 32891622 32891842 -220364741 - AluJo SINE Alu -24 288 58 2861 99 24 52 chr2 32891873 32892162 -220364421 - L1P4 LINE L1 -415 5751 5485 2172 100 7 0 chr2 32892162 32892483 -220364100 + AluSx SINE Alu 1 323 0 2861 99 24 52 chr2 32892483 32892765 -220363818 - L1P4 LINE L1 -681 5485 5197 1066 277 10 37 chr2 32892801 32893101 -220363482 - AluSq SINE Alu -10 293 2 3235 175 11 0 chr2 32893104 32893743 -220362840 - L1 LINE L1 -1125 5021 4376 1291 128 32 41 chr2 32893745 32893964 -220362619 - AluJb SINE Alu -11 301 85 1007 129 0 0 chr2 32894042 32894182 -220362401 + FLAM_C SINE Alu 1 140 -3 414 0 0 0 chr2 32894424 32894470 -220362113 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2138 118 0 0 chr2 32894470 32894749 -220361834 - AluSx SINE Alu -32 280 2 236 250 0 12 chr2 32894936 32894966 -220361617 + CT-rich Low_complexity Low_complexity 2 31 -53 2020 95 0 11 chr2 32894966 32895229 -220361354 - AluSx SINE Alu -52 260 1 236 250 0 12 chr2 32895229 32895282 -220361301 + CT-rich Low_complexity Low_complexity 31 84 0 2268 113 0 3 chr2 32895328 32895629 -220360954 - AluSx SINE Alu -12 300 1 271 149 0 0 chr2 32897002 32897049 -220359534 - L1MC3 LINE L1 -159 7626 7580 2356 93 7 7 chr2 32897049 32897351 -220359232 - AluSg SINE Alu -8 302 1 357 271 97 84 chr2 32899248 32899403 -220357180 + MIR3 SINE MIR 16 172 -36 21 0 0 0 chr2 32900691 32900712 -220355871 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr2 32901302 32901331 -220355252 + (TG)n Simple_repeat Simple_repeat 2 30 0 2358 93 10 0 chr2 32902483 32902784 -220353799 + AluSp SINE Alu 1 304 -9 885 229 182 39 chr2 32902784 32903217 -220353366 + MLT1J LTR MaLR 2 496 -15 373 252 81 0 chr2 32903918 32904041 -220352542 - L2 LINE L2 -1 3271 3139 594 266 153 62 chr2 32904120 32904602 -220351981 + HAL1 LINE L1 590 1115 -1392 1748 144 25 14 chr2 32904653 32904937 -220351646 - AluSx SINE Alu -11 301 15 1188 141 6 0 chr2 32905033 32905196 -220351387 + AluSx SINE Alu 1 164 -148 418 107 16 36 chr2 32905208 32905363 -220351220 + AluSp SINE Alu 145 268 -45 361 301 238 31 chr2 32905434 32906038 -220350545 - L2 LINE L2 -1059 2255 1527 504 133 0 0 chr2 32906274 32906349 -220350234 - AluS SINE Alu -236 76 2 1236 128 0 0 chr2 32906357 32906529 -220350054 - AluSg/x SINE Alu -12 300 129 2323 153 35 59 chr2 32906532 32907039 -220349544 - L1M4 LINE L1 -394 5784 5266 2368 93 0 7 chr2 32907039 32907340 -220349243 - AluSg SINE Alu -11 299 1 2323 153 35 59 chr2 32907340 32907433 -220349150 - L1M4 LINE L1 -912 5266 5197 1726 160 32 51 chr2 32907433 32907746 -220348837 - AluJb SINE Alu -5 307 1 2120 168 13 5 chr2 32907746 32908138 -220348445 - L1MC3 LINE L1 -202 7583 7189 317 169 15 0 chr2 32908134 32908199 -220348384 - L1M4 LINE L1 -3160 2986 2921 * 494 327 56 20 chr2 32908550 32908853 -220347730 - L2 LINE L2 -2263 1051 738 860 154 67 0 chr2 32908854 32909003 -220347580 + FRAM SINE Alu 1 155 -21 554 130 0 20 chr2 32909014 32909114 -220347469 + (GGAA)n Simple_repeat Simple_repeat 1 98 0 2363 205 12 48 chr2 32909119 32909191 -220347392 - L1M4 LINE L1 -3155 2991 2918 270 0 0 0 chr2 32909191 32909221 -220347362 + (TA)n Simple_repeat Simple_repeat 2 31 0 783 185 0 15 chr2 32909221 32909356 -220347227 - FLAM_C SINE Alu 0 133 1 2363 205 12 48 chr2 32909356 32909847 -220346736 - L1M4 LINE L1 -3226 2920 2447 617 137 8 76 chr2 32909860 32909964 -220346619 + L1MB3 LINE L1 6040 6135 -48 2192 103 13 16 chr2 32909964 32910275 -220346308 + AluY SINE Alu 1 310 -1 617 137 8 76 chr2 32910275 32910301 -220346282 + L1MB3 LINE L1 6135 6161 -22 1116 175 256 0 chr2 32910497 32910771 -220345812 + MLT1F1 LTR MaLR 224 567 0 21 0 0 0 chr2 32911143 32911164 -220345419 + AT_rich Low_complexity Low_complexity 1 21 0 306 210 194 32 chr2 32911571 32911823 -220344760 - L1MC5 LINE L1 -26 7935 7643 381 296 0 0 chr2 32912479 32912577 -220344006 + MIR3 SINE MIR 81 178 -30 691 212 32 41 chr2 32912698 32912956 -220343627 + L1MEc LINE L1 2163 2384 -3831 2058 123 0 0 chr2 32914863 32915140 -220341443 + AluSx SINE Alu 1 277 -35 198 0 0 0 chr2 32915146 32915168 -220341415 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 293 318 23 23 chr2 32915168 32915293 -220341290 + MIR SINE MIR 134 261 -1 270 303 165 32 chr2 32915316 32915534 -220341049 + MIR SINE MIR 16 262 0 328 318 19 0 chr2 32915638 32915745 -220340838 + MIR3 SINE MIR 88 196 -12 2173 134 0 0 chr2 32915836 32916143 -220340440 - AluSx SINE Alu -3 309 3 180 0 0 0 chr2 32916266 32916286 -220340297 + (A)n Simple_repeat Simple_repeat 1 20 0 2632 61 0 6 chr2 32917229 32917542 -220339041 - AluY SINE Alu 0 311 1 1821 221 24 101 chr2 32917549 32917920 -220338663 + L1MEc LINE L1 2908 3189 -3026 819 137 0 0 chr2 32917920 32918037 -220338546 - FLAM_C SINE Alu -16 117 1 1821 221 24 101 chr2 32918037 32918448 -220338135 + L1MEc LINE L1 3189 3630 -2585 1199 205 18 144 chr2 32918480 32918629 -220337954 + L1MEc LINE L1 3617 3783 -2432 1581 207 0 3 chr2 32918629 32918924 -220337659 + AluJo SINE Alu 1 294 -18 1199 205 18 144 chr2 32918924 32918993 -220337590 + L1MEc LINE L1 3783 3859 -2356 2208 110 0 3 chr2 32918993 32919292 -220337291 + AluSg SINE Alu 1 298 -12 1199 205 18 144 chr2 32919292 32919387 -220337196 + L1MEc LINE L1 3859 3964 -2251 2338 82 14 0 chr2 32919387 32919680 -220336903 + AluSg SINE Alu 4 300 -10 1199 205 18 144 chr2 32919680 32919834 -220336749 + L1MEc LINE L1 3964 4136 -2079 1913 154 0 0 chr2 32919834 32920119 -220336464 + AluJo SINE Alu 3 287 -25 1199 205 18 144 chr2 32920119 32920518 -220336065 + L1MEc LINE L1 4136 4324 -1891 737 181 8 0 chr2 32920561 32920688 -220335895 + FLAM_C SINE Alu 1 128 -5 532 153 0 18 chr2 32920688 32920799 -220335784 + GA-rich Low_complexity Low_complexity 1 109 0 269 211 0 0 chr2 32920816 32920868 -220335715 + AluSp SINE Alu 135 186 -117 2332 108 0 3 chr2 32920892 32921198 -220335385 + AluSx SINE Alu 1 305 -7 2916 94 48 0 chr2 32921200 32921634 -220334949 + L1MA2 LINE L1 5850 6304 0 210 226 161 21 chr2 32921643 32921736 -220334847 + MIR SINE MIR 157 262 0 2260 107 0 0 chr2 32921766 32922055 -220334528 + AluSx SINE Alu 1 289 -23 286 297 54 9 chr2 32922171 32922282 -220334301 + L3 LINE CR1 1409 1524 -53 1325 186 107 18 chr2 32922642 32922922 -220333661 - AluJo SINE Alu -7 305 1 2179 77 4 7 chr2 32923166 32923440 -220333143 - AluSp SINE Alu -2 311 39 38 39 0 0 chr2 32923440 32923492 -220333091 + AT_rich Low_complexity Low_complexity 1 52 0 201 211 0 0 chr2 32923498 32923550 -220333033 + (TA)n Simple_repeat Simple_repeat 2 53 0 1895 126 81 0 chr2 32923703 32924013 -220332570 + L1PB4 LINE L1 5818 6152 -4 1868 143 39 7 chr2 32924095 32924402 -220332181 + MER49 LTR ERV1 1 317 -606 694 150 4 22 chr2 32924402 32924660 -220331923 + AluJ SINE Alu 1 309 -3 1635 147 35 57 chr2 32924660 32924974 -220331609 + MER49 LTR ERV1 308 614 -309 515 120 49 6 chr2 32924981 32925121 -220331462 + MER30 DNA MER1_type 2 230 0 2160 87 23 26 chr2 32925121 32925430 -220331153 + MER49 LTR ERV1 607 914 -9 23 54 0 0 chr2 32927827 32927864 -220328719 + AT_rich Low_complexity Low_complexity 1 37 0 2590 41 0 0 chr2 32928601 32928893 -220327690 + AluY SINE Alu 1 292 -19 2288 97 0 0 chr2 32929022 32929312 -220327271 - AluSg SINE Alu -20 290 1 243 167 17 50 chr2 32929468 32929528 -220327055 + MIR SINE MIR 63 120 -142 2462 76 3 0 chr2 32929547 32929849 -220326734 + AluSp SINE Alu 1 303 -10 610 236 50 55 chr2 32929853 32930052 -220326531 + MER63A DNA MER1_type 8 205 -5 197 301 221 0 chr2 32930058 32930171 -220326412 + MIR SINE MIR 125 262 0 2385 102 3 0 chr2 32930478 32930782 -220325801 - AluSp SINE Alu -8 305 1 2490 79 3 0 chr2 32931105 32931410 -220325173 + AluSp SINE Alu 3 308 -5 2341 90 0 16 chr2 32931597 32931907 -220324676 + AluSc SINE Alu 1 305 -4 987 204 19 28 chr2 32932061 32932272 -220324311 + MER3 DNA MER1_type 1 209 0 289 327 35 40 chr2 32932774 32932976 -220323607 - MIR3 SINE MIR -5 203 3 2363 92 3 0 chr2 32933190 32933495 -220323088 + AluSx SINE Alu 1 306 -6 4121 116 49 80 chr2 32933592 32934401 -220322182 - LTR1 LTR ERV1 -1 784 1 1774 166 0 40 chr2 32934971 32935272 -220321311 - AluJb SINE Alu -23 289 1 1412 203 81 61 chr2 32935448 32935811 -220320772 - L1ME2 LINE L1 -13 6151 5776 2259 76 46 16 chr2 32935811 32936114 -220320469 + AluSx SINE Alu 1 312 0 1412 203 81 61 chr2 32936114 32936209 -220320374 - L1ME2 LINE L1 -388 5776 5684 1963 205 27 117 chr2 32936365 32936775 -220319808 + LTR9 LTR ERV1 37 482 -130 2344 66 0 3 chr2 32936775 32937061 -220319522 + AluY SINE Alu 1 285 -26 1963 205 27 117 chr2 32937061 32937181 -220319402 + LTR9 LTR ERV1 482 504 -108 2301 99 0 0 chr2 32937181 32937474 -220319109 - AluSc SINE Alu -16 293 1 1963 205 27 117 chr2 32937474 32937575 -220319008 + LTR9 LTR ERV1 503 612 0 2540 68 0 0 chr2 32937665 32937973 -220318610 + AluSc SINE Alu 1 308 -1 2102 139 0 3 chr2 32938357 32938659 -220317924 + AluSx SINE Alu 1 301 -11 33 0 0 0 chr2 32938781 32938814 -220317769 + AT_rich Low_complexity Low_complexity 1 33 0 463 136 0 0 chr2 32938814 32938880 -220317703 - AluS SINE Alu -246 66 1 290 299 110 0 chr2 32939099 32939226 -220317357 + MIR SINE MIR 48 188 -74 918 182 123 26 chr2 32939352 32939676 -220316907 + MLT1B LTR MaLR 1 503 -2 224 318 23 0 chr2 32939710 32939798 -220316785 + MIR SINE MIR 46 135 -73 246 317 10 29 chr2 32939882 32939986 -220316597 + MIR3 SINE MIR 101 202 -6 2432 74 3 3 chr2 32940018 32940317 -220316266 + AluSg SINE Alu 1 299 -11 2337 109 3 3 chr2 32941033 32941345 -220315238 - AluSx SINE Alu 0 312 1 354 254 48 63 chr2 32941966 32942110 -220314473 + L1ME4a LINE L1 5923 6066 -55 1755 160 3 21 chr2 32942110 32942460 -220314123 - AluSx SINE Alu 0 345 1 354 254 48 63 chr2 32942460 32942503 -220314080 + L1ME4a LINE L1 6066 6108 -13 1531 221 131 13 chr2 32942553 32943005 -220313578 + MLT1D LTR MaLR 1 505 0 1289 96 0 6 chr2 32943649 32943816 -220312767 - AluSg/x SINE Alu -9 303 138 2140 114 10 0 chr2 32943818 32944117 -220312466 - AluSq SINE Alu -11 302 1 32 26 0 0 chr2 32944191 32944230 -220312353 + AT_rich Low_complexity Low_complexity 1 39 0 421 169 35 12 chr2 32944234 32944406 -220312177 + (TA)n Simple_repeat Simple_repeat 1 176 0 292 313 47 16 chr2 32944510 32944638 -220311945 + L3 LINE CR1 1155 1286 -291 2119 136 0 3 chr2 32944726 32945020 -220311563 - AluSx SINE Alu -19 293 1 278 233 78 22 chr2 32945020 32945110 -220311473 + LTR67 LTR ERVL 10 104 -453 2192 116 0 10 chr2 32945437 32945740 -220310843 + AluSx SINE Alu 1 300 -12 1780 128 3 62 chr2 32945750 32946085 -220310498 + AluSx SINE Alu 1 317 0 1993 163 24 24 chr2 32946266 32946603 -220309980 + MER1B DNA MER1_type 1 337 0 1725 181 0 17 chr2 32946652 32946950 -220309633 - AluJo SINE Alu -19 293 1 301 200 105 9 chr2 32946958 32947063 -220309520 - L1ME4a LINE L1 -5 6116 6002 * 902 223 96 0 chr2 32947061 32947368 -220309215 - L1ME4a LINE L1 -702 5462 5136 207 0 0 0 chr2 32947379 32947402 -220309181 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 381 22 0 0 chr2 32947401 32947447 -220309136 + (GA)n Simple_repeat Simple_repeat 2 47 0 1645 101 22 9 chr2 32947464 32947692 -220308891 - AluSq SINE Alu -82 231 1 860 161 40 7 chr2 32947819 32947968 -220308615 + MLT1A1 LTR MaLR 1 154 -211 345 78 0 0 chr2 32947970 32948021 -220308562 + L1MA3 LINE L1 6255 6305 0 879 143 0 14 chr2 32948025 32948165 -220308418 + FRAM SINE Alu 33 170 -6 1224 137 64 5 chr2 32948165 32948369 -220308214 + MLT1A1 LTR MaLR 150 365 0 337 233 0 0 chr2 32948369 32948429 -220308154 - MLT1D LTR MaLR -445 60 1 228 182 91 0 chr2 32948434 32948489 -220308094 - L1 LINE L1 -2143 4003 3944 488 223 191 0 chr2 32948497 32948654 -220307929 - MIR SINE MIR -24 238 52 3547 142 82 60 chr2 32948753 32948894 -220307689 - L1MB8 LINE L1 0 6178 6042 1794 158 0 14 chr2 32948894 32949178 -220307405 + AluJb SINE Alu 13 292 -20 3547 142 82 60 chr2 32949178 32949782 -220306801 - L1MB8 LINE L1 -136 6042 5417 2302 100 3 0 chr2 32949819 32950119 -220306464 + AluSg SINE Alu 1 301 -9 851 308 184 13 chr2 32950120 32950771 -220305812 - L2 LINE L2 -137 3176 2397 1947 104 43 4 chr2 32950800 32951079 -220305504 + AluSg SINE Alu 7 296 -14 7852 75 2 1 chr2 32951446 32952414 -220304169 - LTR5 LTR ERVK 0 969 1 2196 89 0 3 chr2 32952457 32952764 -220303819 + AluSc SINE Alu 1 306 0 869 216 12 6 chr2 32952764 32952926 -220303657 + AluJo/FRAM SINE Alu 134 296 -16 238 255 286 10 chr2 32953205 32953303 -220303280 + MIR SINE MIR 16 140 -68 260 320 0 31 chr2 32953365 32953462 -220303121 - MIR3 SINE MIR -45 163 70 2310 31 38 17 chr2 32954845 32955136 -220301447 - AluY SINE Alu -14 297 1 2486 44 0 38 chr2 32955253 32955573 -220301010 - AluY SINE Alu -3 308 1 833 154 7 20 chr2 32955747 32955896 -220300687 - FRAM SINE Alu 0 40 1 1865 87 0 12 chr2 32956000 32956241 -220300342 - AluY SINE Alu -20 291 54 2517 37 3 13 chr2 32956248 32956546 -220300037 - AluY SINE Alu -16 295 1 284 191 111 0 chr2 32956546 32956609 -220299974 - AluJo SINE Alu -166 136 67 * 306 169 20 5 chr2 32956600 32956658 -220299925 - Alu SINE Alu -251 51 1 2110 138 0 3 chr2 32957102 32957406 -220299177 - AluJb SINE Alu -9 303 1 1903 150 10 23 chr2 32957473 32957780 -220298803 + AluSx SINE Alu 1 303 -9 831 206 12 18 chr2 32957786 32957951 -220298632 + AluJb SINE Alu 143 306 -6 698 228 0 0 chr2 32958014 32958141 -220298442 + FLAM_A SINE Alu 1 127 -6 476 288 32 50 chr2 32958231 32958293 -220298290 + MIR SINE MIR 47 109 -153 2300 92 0 3 chr2 32958293 32958596 -220297987 - AluSg SINE Alu -8 302 1 476 288 32 50 chr2 32958596 32958660 -220297923 + MIR SINE MIR 109 173 -89 2398 54 10 3 chr2 32958660 32958957 -220297626 + AluY SINE Alu 1 299 -12 476 288 32 50 chr2 32958957 32959048 -220297535 + MIR SINE MIR 173 261 -1 2223 96 0 23 chr2 32959586 32959888 -220296695 - AluSx SINE Alu -17 295 1 681 308 146 55 chr2 32959938 32960209 -220296374 - L2 LINE L2 0 3313 3068 2183 133 155 3 chr2 32960209 32960577 -220296006 + MSTA LTR MaLR 5 428 0 681 308 146 55 chr2 32960577 32961273 -220295310 - L2 LINE L2 -245 3068 2242 5018 181 113 47 chr2 32961306 32961514 -220295069 - Charlie6 DNA MER1_type -61 3439 3246 1722 112 0 0 chr2 32961514 32961746 -220294837 - AluSg/x SINE Alu -6 304 73 5018 181 113 47 chr2 32961746 32961988 -220294595 - Charlie6 DNA MER1_type -254 3246 3021 1187 169 52 24 chr2 32961988 32962236 -220294347 + L1MD2 LINE L1 6095 6349 -10 5018 181 113 47 chr2 32962236 32962418 -220294165 - Charlie6 DNA MER1_type -479 3021 2852 2079 93 43 0 chr2 32962418 32962696 -220293887 - AluSc SINE Alu -19 290 1 5018 181 113 47 chr2 32962696 32962827 -220293756 - Charlie6 DNA MER1_type -648 2852 2731 1880 155 21 0 chr2 32962827 32963117 -220293466 + AluSx SINE Alu 1 296 -16 5018 181 113 47 chr2 32963117 32963714 -220292869 - Charlie6 DNA MER1_type -769 2731 1986 2008 107 0 4 chr2 32964391 32964661 -220291922 + AluSx SINE Alu 1 269 -43 198 0 0 0 chr2 32964661 32964683 -220291900 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 986 167 19 0 chr2 32964683 32964845 -220291738 + AluSc SINE Alu 130 294 -15 213 222 175 16 chr2 32965092 32965155 -220291428 - MIR SINE MIR -78 130 58 220 329 121 7 chr2 32966085 32966225 -220290358 + MIR3 SINE MIR 49 204 -4 24 0 0 0 chr2 32966506 32966530 -220290053 + AT_rich Low_complexity Low_complexity 1 24 0 1958 129 0 32 chr2 32967117 32967426 -220289157 + AluSx SINE Alu 1 299 -13 256 264 28 0 chr2 32967426 32967498 -220289085 - HsTC2 DNA Tc2 0 1898 1825 379 310 102 43 chr2 32967510 32967765 -220288818 + L1MEd LINE L1 327 596 -5523 349 253 61 0 chr2 32967807 32967906 -220288677 - HsTC2 DNA Tc2 -1793 105 1 21 0 0 0 chr2 32968019 32968040 -220288543 + AT_rich Low_complexity Low_complexity 1 21 0 2372 84 0 10 chr2 32968445 32968753 -220287830 + AluSc SINE Alu 1 305 -4 269 0 0 53 chr2 32968902 32968940 -220287643 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 5974 65 32 53 chr2 32968941 32970908 -220285675 - SVA Other Other -518 1383 70 240 35 0 0 chr2 32970908 32970937 -220285646 + (AGGGGG)n Simple_repeat Simple_repeat 6 34 0 1411 213 82 62 chr2 32971176 32971477 -220285106 - MLT1D LTR MaLR 0 505 193 2095 131 3 0 chr2 32971477 32971767 -220284816 - AluSq SINE Alu -22 291 1 1411 213 82 62 chr2 32971767 32971855 -220284728 - MLT1D LTR MaLR -312 193 108 2064 93 62 3 chr2 32972070 32972359 -220284224 + AluSx SINE Alu 1 306 -6 1985 217 50 35 chr2 32972383 32972984 -220283599 - L1MC4a LINE L1 -353 7455 6779 2169 110 13 0 chr2 32972984 32973285 -220283298 - AluSp SINE Alu -8 305 1 1985 217 50 35 chr2 32973285 32973350 -220283233 - L1MC4a LINE L1 -1029 6779 6716 889 119 0 0 chr2 32973350 32973468 -220283115 + FLAM_C SINE Alu 1 118 -25 180 97 0 0 chr2 32973518 32973549 -220283034 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 436 204 44 53 chr2 32973553 32973666 -220282917 - L1MC4a LINE L1 -1105 6703 6600 1830 149 14 0 chr2 32974417 32974720 -220281863 - AluSx SINE Alu 0 309 3 2132 136 13 0 chr2 32974730 32975038 -220281545 - AluSx SINE Alu 0 312 1 1547 167 49 3 chr2 32975095 32975401 -220281182 - Charlie1 DNA MER1_type -162 2599 2280 1393 195 47 4 chr2 32975404 32975681 -220280902 + AluJb SINE Alu 1 289 -23 1868 109 12 62 chr2 32975702 32975850 -220280733 + AluSx SINE Alu 1 126 -186 2303 97 3 0 chr2 32975850 32976149 -220280434 + AluSp SINE Alu 2 301 -12 1868 109 12 62 chr2 32976149 32976320 -220280263 + AluSx SINE Alu 126 304 -8 284 344 67 20 chr2 32976591 32976801 -220279782 + MIR SINE MIR 34 252 -10 316 295 9 9 chr2 32976975 32977080 -220279503 - L2 LINE L2 -1035 2279 2175 1675 108 150 0 chr2 32977609 32977869 -220278714 - AluSx SINE Alu -13 299 1 2353 107 0 0 chr2 32977884 32978193 -220278390 - AluSg SINE Alu -1 309 1 484 243 115 46 chr2 32978783 32978950 -220277633 + MIR SINE MIR 28 215 -47 1649 161 33 15 chr2 32978950 32979224 -220277359 + AluJb SINE Alu 4 282 -30 484 243 115 46 chr2 32979224 32979274 -220277309 + MIR SINE MIR 215 260 -2 1430 158 98 8 chr2 32979290 32979556 -220277027 + AluJb SINE Alu 1 290 -22 1111 186 101 0 chr2 32980378 32980577 -220276006 + MER20 DNA MER1_type 1 219 0 22 70 0 0 chr2 32980829 32980872 -220275711 + AT_rich Low_complexity Low_complexity 1 43 0 217 281 9 119 chr2 32980979 32981166 -220275417 - MER5B DNA MER1_type -25 164 7 27 49 0 0 chr2 32981905 32981946 -220274637 + AT_rich Low_complexity Low_complexity 1 41 0 33 56 0 0 chr2 32982024 32982078 -220274505 + AT_rich Low_complexity Low_complexity 1 54 0 2259 87 10 13 chr2 32983510 32983819 -220272764 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr2 32983900 32983922 -220272661 + AT_rich Low_complexity Low_complexity 1 22 0 2300 91 7 0 chr2 32983977 32984273 -220272310 - AluY SINE Alu -13 298 1 2208 106 3 0 chr2 32984296 32984615 -220271968 + AluSp SINE Alu 1 320 0 2399 52 42 0 chr2 32984626 32984915 -220271668 + AluY SINE Alu 1 301 -10 1131 172 63 14 chr2 32985075 32985296 -220271287 + MER46A DNA MER2_type 5 236 0 22 80 0 0 chr2 32985350 32985400 -220271183 + AT_rich Low_complexity Low_complexity 1 50 0 2259 108 3 3 chr2 32985546 32985853 -220270730 - AluSx SINE Alu -4 308 2 856 137 0 0 chr2 32986078 32986202 -220270381 + FLAM_C SINE Alu 1 124 -19 1064 196 8 106 chr2 32986266 32986476 -220270107 + MER8 DNA MER2_type 1 181 -58 1804 143 17 11 chr2 32986476 32986763 -220269820 + AluJb SINE Alu 17 305 -7 1064 196 8 106 chr2 32986763 32986817 -220269766 + MER8 DNA MER2_type 181 239 0 731 100 0 40 chr2 32986939 32987039 -220269544 + 7SLRNA srpRNA srpRNA 213 308 -12 2681 39 0 0 chr2 32988071 32988382 -220268201 + AluY SINE Alu 1 311 0 261 286 12 36 chr2 32988483 32988567 -220268016 - L2 LINE L2 -8 3264 3183 2397 55 3 0 chr2 32988575 32988864 -220267719 + AluY SINE Alu 1 290 -21 269 384 10 10 chr2 32989001 32989100 -220267483 - L2 LINE L2 -221 3051 2953 23 0 0 0 chr2 32989126 32989149 -220267434 + AT_rich Low_complexity Low_complexity 1 23 0 2047 125 7 0 chr2 32989241 32989530 -220267053 - AluSx SINE Alu -21 291 1 2142 101 35 0 chr2 32989571 32989858 -220266725 - AluSx SINE Alu -15 297 1 1217 217 83 10 chr2 32989892 32990206 -220266377 + L1ME3A LINE L1 5626 5962 -208 2315 94 3 0 chr2 32990256 32990555 -220266028 + AluSp SINE Alu 1 300 -13 192 224 165 47 chr2 32990565 32990650 -220265933 + MIR SINE MIR 168 262 0 814 307 78 58 chr2 32990797 32991296 -220265287 - MLT1J LTR MaLR 0 511 3 2295 66 31 0 chr2 32991332 32991621 -220264962 + AluY SINE Alu 1 298 -13 819 131 0 29 chr2 32991762 32991899 -220264684 + FLAM_C SINE Alu 1 133 0 238 234 172 8 chr2 32991926 32992054 -220264529 + L1ME3A LINE L1 5107 5255 -891 243 239 195 61 chr2 32992147 32992313 -220264270 + L1ME3A LINE L1 5314 5499 -722 2378 74 3 3 chr2 32992645 32992942 -220263641 - AluSc SINE Alu -12 297 1 2214 94 7 3 chr2 32993009 32993296 -220263287 + AluSc SINE Alu 1 288 -21 1162 180 182 95 chr2 32993423 32993444 -220263139 + L1ME3A LINE L1 5669 5687 -483 794 160 189 17 chr2 32993444 32993619 -220262964 + MER3 DNA MER1_type 1 205 -4 1162 180 182 95 chr2 32993619 32993766 -220262817 + L1ME3A LINE L1 5687 5820 -350 1914 135 14 14 chr2 32993766 32994062 -220262521 + AluJb SINE Alu 3 298 -14 1162 180 182 95 chr2 32994062 32994353 -220262230 + L1ME3A LINE L1 5820 6169 -1 1946 124 28 11 chr2 32994359 32994641 -220261942 + AluSx SINE Alu 1 287 -25 2405 89 3 3 chr2 32994870 32995183 -220261400 + AluSp SINE Alu 1 313 0 310 191 12 0 chr2 32995402 32995464 -220261119 - Alu SINE Alu -254 47 1 244 0 0 0 chr2 32995730 32995757 -220260826 + (TTTG)n Simple_repeat Simple_repeat 2 128 0 2286 48 26 0 chr2 32995757 32996031 -220260552 - AluY SINE Alu -31 280 1 1058 207 24 132 chr2 32996032 32996153 -220260430 + MLT2D LTR ERVL 1 133 -281 2105 49 20 15 chr2 32996153 32996461 -220260122 + AluY SINE Alu 1 282 -29 1058 207 24 132 chr2 32996461 32996802 -220259781 + MLT2D LTR ERVL 133 414 0 2020 118 0 20 chr2 32997017 32997321 -220259262 + AluSx SINE Alu 1 298 -14 626 227 164 13 chr2 32997323 32997548 -220259035 - L1ME LINE L1 -525 5641 5383 23 0 0 0 chr2 32997548 32997571 -220259012 + AT_rich Low_complexity Low_complexity 1 23 0 310 164 0 36 chr2 32997572 32997627 -220258956 - AluJo SINE Alu -13 289 237 441 72 0 72 chr2 32997638 32997707 -220258876 + LTR32 LTR ERVL 24 87 -384 1507 132 12 21 chr2 32997726 32997968 -220258615 + LTR32 LTR ERVL 232 471 0 1054 153 34 114 chr2 32997968 32998187 -220258396 - AluJo SINE Alu -71 241 45 2314 53 7 7 chr2 32998187 32998487 -220258096 + AluY SINE Alu 1 300 -11 1054 153 34 114 chr2 32998487 32998529 -220258054 - AluJo SINE Alu -267 45 1 2084 121 23 0 chr2 32998585 32998891 -220257692 + AluSq SINE Alu 1 313 0 1000 105 0 0 chr2 32998910 32999043 -220257540 + AluSq/x SINE Alu 1 133 -179 308 238 71 12 chr2 32999701 32999785 -220256798 + MIR SINE MIR 17 105 -157 23 33 0 0 chr2 32999813 32999843 -220256740 + AT_rich Low_complexity Low_complexity 1 30 0 218 189 85 142 chr2 32999862 32999920 -220256663 + MIR SINE MIR 104 155 -107 1990 131 0 13 chr2 32999920 33000054 -220256529 + AluSg SINE Alu 1 135 -175 1991 100 0 4 chr2 33000054 33000334 -220256249 + AluSq SINE Alu 35 313 0 1990 131 0 13 chr2 33000334 33000497 -220256086 + AluSg SINE Alu 135 294 -16 218 189 85 142 chr2 33000497 33000544 -220256039 + MIR SINE MIR 155 203 -59 931 177 151 137 chr2 33000571 33000943 -220255640 + L1MC4 LINE L1 6671 7047 -995 648 153 48 4 chr2 33001018 33001145 -220255438 + L1MC4 LINE L1 7646 8041 -1 215 284 0 15 chr2 33001145 33001212 -220255371 + MIR SINE MIR 197 262 0 2232 106 0 3 chr2 33001506 33001817 -220254766 - AluSx SINE Alu -2 310 1 820 136 42 131 chr2 33002110 33002148 -220254435 + MER20 DNA MER1_type 1 41 -178 2401 62 0 10 chr2 33002148 33002454 -220254129 - AluY SINE Alu -8 303 1 820 136 42 131 chr2 33002454 33002606 -220253977 + MER20 DNA MER1_type 41 174 -45 21 57 0 0 chr2 33002722 33002757 -220253826 + AT_rich Low_complexity Low_complexity 1 35 0 2068 114 3 3 chr2 33002782 33003080 -220253503 + AluSx SINE Alu 1 298 -14 330 128 0 0 chr2 33003233 33003280 -220253303 - AluSp SINE Alu -125 178 132 2192 88 3 3 chr2 33003287 33003581 -220253002 - AluSq SINE Alu -19 294 1 1437 113 21 125 chr2 33003600 33003936 -220252647 - AluSx SINE Alu -1 301 1 261 0 0 0 chr2 33004152 33004181 -220252402 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1277 206 0 16 chr2 33004210 33004462 -220252121 - AluJo SINE Alu -64 248 1 1884 135 0 3 chr2 33004565 33004882 -220251701 - AluSg SINE Alu 0 316 1 331 248 25 83 chr2 33005042 33005199 -220251384 - HAL1b LINE L1 -492 856 709 2273 88 3 3 chr2 33005371 33005678 -220250905 + AluSp SINE Alu 1 307 -6 1939 125 7 0 chr2 33005683 33005982 -220250601 + AluSx SINE Alu 1 301 0 271 253 13 0 chr2 33006210 33006289 -220250294 - HAL1 LINE L1 -699 1808 1729 1796 133 4 4 chr2 33006498 33006769 -220249814 + AluSx SINE Alu 1 271 -41 2154 97 0 10 chr2 33006870 33007179 -220249404 + AluY SINE Alu 4 309 -2 311 227 36 26 chr2 33007487 33007608 -220248975 - LTR33A LTR ERVL 0 523 431 2352 70 3 3 chr2 33007652 33007964 -220248619 + AluSx SINE Alu 1 312 0 2200 89 14 0 chr2 33008576 33008867 -220247716 + AluSx SINE Alu 10 304 -8 327 309 55 0 chr2 33008868 33008978 -220247605 + L1MC4a LINE L1 5825 5940 -1868 1995 82 7 4 chr2 33008978 33009247 -220247336 + AluSp SINE Alu 1 270 -43 405 0 0 0 chr2 33009250 33009295 -220247288 + (CA)n Simple_repeat Simple_repeat 2 46 0 189 0 0 0 chr2 33009365 33009386 -220247197 + (TG)n Simple_repeat Simple_repeat 1 21 0 830 182 6 0 chr2 33009386 33009551 -220247032 - L1MD3 LINE L1 -10 7985 7820 248 226 94 0 chr2 33009549 33009602 -220246981 - L1MC4a LINE L1 -435 7373 7316 * 816 122 29 7 chr2 33009603 33009742 -220246841 - L1MC4a LINE L1 -1421 6387 6246 876 221 146 35 chr2 33009742 33009906 -220246677 - AluJo SINE Alu 0 313 168 2076 109 10 0 chr2 33009906 33010199 -220246384 + AluSg SINE Alu 1 296 -14 876 221 146 35 chr2 33010199 33010319 -220246264 - AluJo SINE Alu -145 168 1 245 188 0 75 chr2 33010324 33010404 -220246179 - L1MC4a LINE L1 -1572 6236 6163 322 39 59 0 chr2 33010411 33010462 -220246121 + T-rich Low_complexity Low_complexity 1 54 0 697 179 0 0 chr2 33010465 33010582 -220246001 - FLAM_C SINE Alu -16 117 1 2070 93 13 22 chr2 33010630 33010808 -220245775 + AluY SINE Alu 1 176 -135 306 0 0 0 chr2 33010808 33010842 -220245741 + (CGGGG)n Simple_repeat Simple_repeat 1 34 0 2070 93 13 22 chr2 33010842 33010976 -220245607 + AluY SINE Alu 176 310 -1 2328 88 0 0 chr2 33011068 33011375 -220245208 - AluSc SINE Alu -1 308 2 388 228 37 44 chr2 33011386 33011522 -220245061 + Charlie8 DNA MER1_type 72 206 -2211 253 266 109 120 chr2 33011730 33011914 -220244669 + MIR SINE MIR 3 184 -78 751 107 90 25 chr2 33011961 33012083 -220244500 + AluSq/x SINE Alu 2 131 -182 2226 105 0 0 chr2 33012085 33012389 -220244194 + AluSx SINE Alu 1 304 -8 2368 88 0 0 chr2 33012393 33012725 -220243858 + AluY SINE Alu 2 333 0 1964 138 0 6 chr2 33012728 33013040 -220243543 + AluSx SINE Alu 1 310 -2 561 236 0 0 chr2 33013047 33013157 -220243426 + MER96B DNA MER1_type? 307 416 -1 664 304 94 61 chr2 33013158 33013492 -220243091 + L2 LINE L2 2652 3011 -302 2032 120 17 3 chr2 33013492 33013792 -220242791 - AluSx SINE Alu -8 304 1 664 304 94 61 chr2 33013792 33014087 -220242496 + L2 LINE L2 3011 3295 -18 843 153 0 0 chr2 33014094 33014225 -220242358 + FLAM_C SINE Alu 1 131 -2 1926 137 0 13 chr2 33014568 33014867 -220241716 + AluSx SINE Alu 1 295 -17 308 222 22 44 chr2 33015110 33015200 -220241383 + MER5A DNA MER1_type 4 91 -98 278 319 7 64 chr2 33015297 33015438 -220241145 - MER5A DNA MER1_type 0 189 57 378 0 0 0 chr2 33015462 33015504 -220241079 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 33015516 33015542 -220241041 + AT_rich Low_complexity Low_complexity 1 26 0 2221 86 7 0 chr2 33015623 33015915 -220240668 + AluY SINE Alu 1 294 -17 204 295 124 0 chr2 33016042 33016147 -220240436 + L2 LINE L2 3194 3311 -2 * 386 244 178 0 chr2 33016146 33016281 -220240302 - MIR SINE MIR -1 261 103 509 116 53 53 chr2 33016294 33016389 -220240194 + LTR47A LTR ERVL 1 95 -357 286 205 86 43 chr2 33016557 33016674 -220239909 - L1MC4 LINE L1 -5 8037 7916 2424 52 0 16 chr2 33016756 33017065 -220239518 - AluY SINE Alu -7 304 1 1132 71 0 0 chr2 33017066 33017206 -220239377 - AluSg SINE Alu -170 140 1 1748 122 7 21 chr2 33017337 33017616 -220238967 + AluSx SINE Alu 1 275 -37 1777 143 0 53 chr2 33017642 33017781 -220238802 + AluSx SINE Alu 1 146 -166 2104 75 7 14 chr2 33017781 33018086 -220238497 + AluSc SINE Alu 1 303 0 1777 143 0 53 chr2 33018086 33018266 -220238317 + AluSx SINE Alu 146 305 -7 2469 56 0 0 chr2 33018290 33018595 -220237988 + AluY SINE Alu 1 305 -6 29 0 0 0 chr2 33019024 33019053 -220237530 + AT_rich Low_complexity Low_complexity 1 29 0 2100 109 0 7 chr2 33019061 33019364 -220237219 + AluSc SINE Alu 1 301 -8 2266 95 0 0 chr2 33019366 33019670 -220236913 + AluSg SINE Alu 1 304 -6 2352 58 0 3 chr2 33019671 33019966 -220236617 + AluY SINE Alu 1 294 -17 3575 144 25 89 chr2 33019975 33020039 -220236544 - L1MB3 LINE L1 -7 6176 6109 1662 152 22 0 chr2 33020039 33020343 -220236240 + AluJo SINE Alu 1 310 0 4305 159 46 23 chr2 33020343 33020824 -220235759 - L1MC2 LINE L1 -12 6332 5864 212 0 0 35 chr2 33020824 33020853 -220235730 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1957 87 0 8 chr2 33020855 33021119 -220235464 - AluSx SINE Alu -24 288 27 1778 150 3 7 chr2 33021119 33021410 -220235173 - AluJb SINE Alu -20 292 1 4305 159 46 23 chr2 33021410 33021796 -220234787 - L1MC2 LINE L1 -479 5865 5441 3575 144 25 89 chr2 33021796 33022440 -220234143 - L1MB3 LINE L1 -73 6110 5520 2164 117 3 0 chr2 33022440 33022749 -220233834 - AluSx SINE Alu -2 310 1 3575 144 25 89 chr2 33022749 33022838 -220233745 - L1MB3 LINE L1 -663 5520 5427 25 75 0 0 chr2 33023027 33023080 -220233503 + AT_rich Low_complexity Low_complexity 1 53 0 1499 134 6 113 chr2 33023127 33023333 -220233250 - AluJb SINE Alu -8 304 144 2130 91 7 26 chr2 33023333 33023640 -220232943 - AluSp SINE Alu -12 301 1 1499 134 6 113 chr2 33023640 33023762 -220232821 - AluJb SINE Alu -168 144 11 1066 53 0 0 chr2 33024167 33024299 -220232284 - AluY SINE Alu -179 132 1 2210 97 0 7 chr2 33024313 33024613 -220231970 - AluSg SINE Alu -12 298 1 192 125 0 0 chr2 33024614 33024646 -220231937 + (TCCC)n Simple_repeat Simple_repeat 4 35 0 2440 77 0 0 chr2 33024650 33024961 -220231622 - AluY SINE Alu 0 311 1 369 56 0 0 chr2 33024988 33025042 -220231541 - Alu SINE Alu 0 302 249 1806 157 20 0 chr2 33025378 33025672 -220230911 - AluJb SINE Alu -12 300 1 2245 83 0 16 chr2 33025696 33026010 -220230573 - AluY SINE Alu -2 309 1 694 108 0 0 chr2 33026113 33026206 -220230377 - AluS SINE Alu -219 93 1 1690 132 41 27 chr2 33026239 33026375 -220230208 + AluSx SINE Alu 1 134 -178 2084 78 7 14 chr2 33026375 33026698 -220229885 + AluSc SINE Alu 1 321 0 1690 132 41 27 chr2 33026698 33026913 -220229670 + AluSx SINE Alu 134 312 0 1771 128 43 0 chr2 33026960 33027242 -220229341 - AluSg SINE Alu -16 294 1 306 0 0 0 chr2 33027343 33027377 -220229206 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1154 110 69 0 chr2 33027386 33027559 -220229024 - AluSg/x SINE Alu -24 286 102 973 134 0 0 chr2 33027582 33027724 -220228859 - AluSq/x SINE Alu -170 142 1 2287 77 0 3 chr2 33027743 33028041 -220228542 - AluY SINE Alu -14 297 1 2145 106 3 0 chr2 33028053 33028354 -220228229 - AluSx SINE Alu -10 302 1 263 333 0 77 chr2 33028464 33028581 -220228002 + MIR SINE MIR 17 124 -138 1900 133 0 17 chr2 33028582 33028749 -220227834 - AluSx SINE Alu -15 297 136 2155 99 7 3 chr2 33028749 33029052 -220227531 - AluSc SINE Alu -5 304 1 1900 133 0 17 chr2 33029052 33029186 -220227397 - AluSx SINE Alu -176 136 1 199 286 68 45 chr2 33029206 33029339 -220227244 - MIR SINE MIR -56 206 71 1954 126 70 3 chr2 33029382 33029683 -220226900 + MER31A LTR ERV1 1 321 -164 255 279 15 0 chr2 33029691 33029759 -220226824 + MER31-int LTR ERV1 103 171 -4765 970 165 6 0 chr2 33029773 33029937 -220226646 + FRAM SINE Alu 1 165 -11 2384 67 0 0 chr2 33029938 33030238 -220226345 + AluY SINE Alu 2 301 -10 310 91 146 0 chr2 33030266 33030321 -220226262 + MER31-int LTR ERV1 172 234 -4702 545 204 73 22 chr2 33030432 33030569 -220226014 + MER31-int LTR ERV1 611 754 -4182 351 171 23 57 chr2 33030596 33030684 -220225899 + MER31-int LTR ERV1 881 965 -3971 1482 102 0 9 chr2 33030689 33030914 -220225669 - AluSg/x SINE Alu -7 305 83 307 134 0 36 chr2 33030914 33030971 -220225612 - Alu SINE Alu -263 38 1 1424 172 35 97 chr2 33030971 33031194 -220225389 + MER31-int LTR ERV1 3683 3875 -1061 2088 99 0 50 chr2 33031194 33031516 -220225067 + AluSg1 SINE Alu 1 306 -3 1424 172 35 97 chr2 33031516 33031664 -220224919 + MER31-int LTR ERV1 3875 4031 -905 264 245 64 43 chr2 33031746 33031840 -220224743 - MIR SINE MIR -10 252 157 303 114 171 29 chr2 33031904 33031974 -220224609 + L1MD2 LINE L1 6070 6149 -210 495 220 0 0 chr2 33031976 33032076 -220224507 + L1MD2 LINE L1 6204 6303 -56 521 188 0 36 chr2 33032076 33032188 -220224395 - L1MC3 LINE L1 -348 7437 7330 21 0 0 0 chr2 33032866 33032887 -220223696 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 33033152 33033179 -220223404 + GC_rich Low_complexity Low_complexity 1 27 0 249 0 40 80 chr2 33033888 33033938 -220222645 + (TGGGGG)n Simple_repeat Simple_repeat 6 53 0 21 36 0 0 chr2 33035578 33035606 -220220977 + AT_rich Low_complexity Low_complexity 1 28 0 798 165 0 0 chr2 33035610 33035731 -220220852 - FLAM_C SINE Alu -21 122 2 192 77 0 0 chr2 33036749 33036775 -220219808 + (TG)n Simple_repeat Simple_repeat 2 27 0 1808 138 6 44 chr2 33036780 33037098 -220219485 - AluSx SINE Alu -6 306 1 4991 136 56 32 chr2 33037216 33038177 -220218406 - L1MC1 LINE L1 -2 6331 5348 2218 89 0 10 chr2 33038178 33038481 -220218102 - AluY SINE Alu -11 300 1 201 261 15 62 chr2 33038579 33038644 -220217939 + MIR SINE MIR 3 64 -198 25 0 0 0 chr2 33038648 33038673 -220217910 + AT_rich Low_complexity Low_complexity 1 25 0 460 237 158 13 chr2 33038728 33038880 -220217703 + MIR SINE MIR 88 261 -1 1734 154 34 3 chr2 33038912 33039210 -220217373 + AluJb SINE Alu 1 307 -5 422 231 121 51 chr2 33039492 33039711 -220216872 + MIR SINE MIR 17 256 -6 207 0 0 0 chr2 33040107 33040130 -220216453 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1880 89 60 11 chr2 33040135 33040404 -220216179 - AluSg SINE Alu -28 282 1 502 251 326 0 chr2 33041014 33041189 -220215394 + MIR SINE MIR 21 252 -10 2173 79 17 3 chr2 33041191 33041482 -220215101 - AluSg SINE Alu -15 295 1 1788 144 48 0 chr2 33041710 33041731 -220214852 - AluSx SINE Alu -6 306 287 264 30 0 0 chr2 33041731 33041764 -220214819 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1788 144 48 0 chr2 33041764 33042034 -220214549 - AluSx SINE Alu -25 287 1 684 257 28 56 chr2 33042095 33042344 -220214239 - HAL1 LINE L1 -2265 242 1 1586 130 8 0 chr2 33042584 33042830 -220213753 + AluJo SINE Alu 21 268 -44 1997 128 3 6 chr2 33043043 33043355 -220213228 + AluSp SINE Alu 1 311 -2 1666 138 22 4 chr2 33043403 33043678 -220212905 + AluSg SINE Alu 1 280 -30 505 207 56 101 chr2 33043930 33044109 -220212474 - MER5B DNA MER1_type 0 178 8 1918 129 0 4 chr2 33044122 33044401 -220212182 + AluSg SINE Alu 1 278 -32 230 0 33 0 chr2 33044410 33044440 -220212143 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1842 146 0 0 chr2 33044529 33044810 -220211773 - AluSx SINE Alu -26 286 6 345 282 122 19 chr2 33044840 33044996 -220211587 - L2 LINE L2 -171 3142 2971 2192 101 0 0 chr2 33045292 33045590 -220210993 - AluSx SINE Alu -13 299 2 832 148 0 0 chr2 33045688 33045810 -220210773 + FLAM_A SINE Alu 16 137 -5 429 270 0 0 chr2 33045810 33045899 -220210684 + L1MC4 LINE L1 6615 6703 -1339 191 35 0 35 chr2 33045925 33045954 -220210629 + (CA)n Simple_repeat Simple_repeat 2 29 0 446 101 0 0 chr2 33046569 33046638 -220209945 - L1MA1 LINE L1 -4 6298 6230 1642 117 0 13 chr2 33046878 33047109 -220209474 + AluJb SINE Alu 85 312 0 286 233 128 0 chr2 33047152 33047238 -220209345 - L1ME4a LINE L1 -63 6058 5962 1958 123 3 30 chr2 33047246 33047546 -220209037 - AluSx SINE Alu -20 292 1 2157 120 3 3 chr2 33047658 33047967 -220208616 - AluSx SINE Alu -1 311 3 26 30 0 0 chr2 33047991 33048024 -220208559 + AT_rich Low_complexity Low_complexity 1 33 0 2202 231 21 26 chr2 33048064 33048425 -220208158 - L1ME1 LINE L1 -72 6094 5736 1684 189 50 3 chr2 33048425 33048722 -220207861 + AluJb SINE Alu 1 311 -1 2202 231 21 26 chr2 33048722 33048976 -220207607 - L1ME1 LINE L1 -430 5736 5482 1350 225 35 65 chr2 33048979 33049442 -220207141 + L1MB1 LINE L1 4541 4989 -1157 * 2162 206 123 22 chr2 33049439 33050064 -220206519 + L1MB1 LINE L1 5481 6168 0 352 227 31 0 chr2 33050080 33050177 -220206406 - L1ME1 LINE L1 -1286 4860 4761 1204 151 46 50 chr2 33050219 33050329 -220206254 - AluJo SINE Alu -69 243 134 2662 30 0 7 chr2 33050329 33050634 -220205949 - AluY SINE Alu -7 304 2 1204 151 46 50 chr2 33050634 33050761 -220205822 - AluJo SINE Alu -178 134 7 610 226 106 22 chr2 33050771 33051046 -220205537 - L1ME1 LINE L1 -1538 4608 4311 673 212 45 6 chr2 33051060 33051239 -220205344 - L1ME1 LINE L1 -1932 4214 4029 510 152 179 9 chr2 33051243 33051355 -220205228 + FLAM_A SINE Alu 1 131 -2 550 104 0 0 chr2 33051373 33051450 -220205133 - Alu SINE Alu -233 77 1 423 159 0 0 chr2 33051450 33051519 -220205064 + Tigger2 DNA MER2_type 678 746 -1972 3102 152 66 23 chr2 33051622 33051767 -220204816 - Tigger2 DNA MER2_type -2025 693 556 2346 85 0 3 chr2 33051767 33052073 -220204510 + AluY SINE Alu 1 305 -6 3102 152 66 23 chr2 33052073 33052591 -220203992 - Tigger2 DNA MER2_type -2162 556 1 891 122 76 133 chr2 33052592 33052855 -220203728 - MER44D DNA MER2_type -91 518 1 841 226 55 60 chr2 33052933 33053077 -220203506 - L1MC4 LINE L1 -1 8041 7898 333 0 0 0 chr2 33053077 33053114 -220203469 + (TG)n Simple_repeat Simple_repeat 2 38 0 841 226 55 60 chr2 33053114 33053384 -220203199 - L1MC4 LINE L1 -144 7898 7629 351 140 0 0 chr2 33054192 33054249 -220202334 - MLT1J LTR MaLR -345 166 110 21 0 0 0 chr2 33054267 33054288 -220202295 + AT_rich Low_complexity Low_complexity 1 21 0 2286 104 3 0 chr2 33054322 33054620 -220201963 - AluSx SINE Alu -13 299 1 234 371 10 0 chr2 33055401 33055498 -220201085 - L3 LINE CR1 -384 1193 1096 360 293 71 20 chr2 33055564 33055762 -220200821 - L3 LINE CR1 -631 946 739 27 0 0 0 chr2 33055988 33056015 -220200568 + AT_rich Low_complexity Low_complexity 1 27 0 1978 110 10 13 chr2 33056310 33056609 -220199974 + AluSx SINE Alu 1 298 -14 2230 108 3 3 chr2 33057096 33057403 -220199180 - AluSp SINE Alu -6 307 1 2220 129 0 0 chr2 33057404 33057707 -220198876 - AluSg SINE Alu -7 303 1 225 279 34 20 chr2 33057707 33057854 -220198729 - L1MC/D LINE L1 -1919 5889 5741 1127 275 215 14 chr2 33057861 33058502 -220198081 - LTR50 LTR ERVL -25 770 1 2102 135 0 0 chr2 33058589 33058885 -220197698 - AluSg SINE Alu -14 296 1 22 0 0 0 chr2 33058895 33058917 -220197666 + AT_rich Low_complexity Low_complexity 1 22 0 2046 98 7 0 chr2 33058917 33059193 -220197390 - AluSg SINE Alu -19 291 14 939 289 47 26 chr2 33059272 33059398 -220197185 - ERVL LTR ERVL -440 5324 5202 2122 108 20 3 chr2 33059398 33059695 -220196888 - AluSx SINE Alu -10 302 1 939 289 47 26 chr2 33059695 33059994 -220196589 - ERVL LTR ERVL -562 5202 4890 3405 300 84 31 chr2 33060055 33062308 -220194275 - ERVL LTR ERVL -1002 4762 2293 1467 220 20 10 chr2 33062308 33062604 -220193979 - AluJo SINE Alu -13 299 1 3405 300 84 31 chr2 33062604 33063260 -220193323 - ERVL LTR ERVL -3471 2293 1674 1163 116 62 58 chr2 33063784 33063968 -220192615 - L1MA7 LINE L1 -6 6285 6098 2147 94 24 10 chr2 33063968 33064265 -220192318 + AluSg SINE Alu 1 301 -9 1163 116 62 58 chr2 33064265 33064321 -220192262 - L1MA7 LINE L1 -193 6098 6044 334 128 0 0 chr2 33064323 33064370 -220192213 - Alu SINE Alu -254 47 1 439 118 0 0 chr2 33064377 33064445 -220192138 - L1P5 LINE L1 -376 5780 5713 21 0 0 0 chr2 33064445 33064466 -220192117 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 33065104 33065148 -220191435 + AT_rich Low_complexity Low_complexity 1 44 0 2079 116 0 60 chr2 33065560 33065727 -220190856 - AluSq SINE Alu -13 300 125 2174 108 10 3 chr2 33065727 33066023 -220190560 - AluSp SINE Alu -15 298 1 2328 98 0 0 chr2 33066026 33066332 -220190251 - AluY SINE Alu -4 307 2 2079 116 0 60 chr2 33066332 33066479 -220190104 - AluSq SINE Alu -190 123 1 1793 110 0 8 chr2 33068156 33068402 -220188181 - AluSx SINE Alu -51 261 18 1482 167 9 66 chr2 33068486 33068804 -220187779 - AluJb SINE Alu -12 300 1 1532 193 10 42 chr2 33069373 33069684 -220186899 - AluJo SINE Alu -11 301 1 207 0 0 0 chr2 33069810 33069833 -220186750 + (TA)n Simple_repeat Simple_repeat 1 23 0 1436 188 58 18 chr2 33070418 33070694 -220185889 + AluJo SINE Alu 6 292 -20 207 171 0 0 chr2 33070720 33070733 -220185850 + (CAA)n Simple_repeat Simple_repeat 2 14 -28 2167 83 3 10 chr2 33070733 33071021 -220185562 + AluY SINE Alu 1 286 -25 207 171 0 0 chr2 33071021 33071048 -220185535 + (CAA)n Simple_repeat Simple_repeat 13 42 0 422 269 60 15 chr2 33071973 33072107 -220184476 - MIR SINE MIR -1 261 122 306 270 235 0 chr2 33072122 33072237 -220184346 - MIR SINE MIR -74 188 47 1743 116 9 78 chr2 33072409 33072592 -220183991 - MER44D DNA MER2_type -1882 609 415 2212 94 0 13 chr2 33072592 33072891 -220183692 - AluSx SINE Alu -17 295 1 1743 116 9 78 chr2 33072891 33073052 -220183531 - MER44D DNA MER2_type -2076 415 19 2279 99 0 3 chr2 33073052 33073345 -220183238 + AluSq SINE Alu 1 292 -21 270 0 0 0 chr2 33073438 33073468 -220183115 + (TG)n Simple_repeat Simple_repeat 1 30 0 225 116 0 0 chr2 33073468 33073511 -220183072 - LTR66 LTR ERVL -174 436 394 267 239 0 0 chr2 33073515 33073582 -220183001 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 250 354 72 9 chr2 33074014 33074237 -220182346 + L1ME LINE L1 5588 5824 -342 24 0 0 0 chr2 33074392 33074416 -220182167 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr2 33074602 33074623 -220181960 + AT_rich Low_complexity Low_complexity 1 21 0 1986 138 0 0 chr2 33074939 33075249 -220181334 - AluSx SINE Alu 0 310 1 914 214 6 0 chr2 33075251 33075419 -220181164 - FAM SINE Alu -6 169 1 35 0 0 0 chr2 33075620 33075655 -220180928 + AT_rich Low_complexity Low_complexity 1 35 0 1877 149 3 23 chr2 33075655 33075957 -220180626 - AluJo SINE Alu -16 296 1 2387 87 0 0 chr2 33076200 33076500 -220180083 - AluSg SINE Alu -10 300 1 2063 123 3 7 chr2 33079792 33080092 -220176491 - AluSx SINE Alu -13 299 1 305 222 69 0 chr2 33080101 33080173 -220176410 - L1MB8 LINE L1 0 6178 6102 1965 133 20 0 chr2 33080183 33080477 -220176106 - AluSx SINE Alu -12 300 1 1700 152 69 4 chr2 33080545 33080822 -220175761 - AluJb SINE Alu -14 298 4 584 121 0 0 chr2 33081388 33081471 -220175112 + AluY SINE Alu 1 83 -228 1775 155 0 24 chr2 33081973 33082269 -220174314 + AluJb SINE Alu 1 289 -23 2321 92 10 7 chr2 33083027 33083331 -220173252 + AluSq SINE Alu 1 305 -8 2359 112 0 0 chr2 33083819 33084131 -220172452 - AluSx SINE Alu 0 312 1 780 118 39 0 chr2 33084146 33084273 -220172310 - AluSq/x SINE Alu -180 132 1 2258 102 13 3 chr2 33085014 33085319 -220171264 - AluSx SINE Alu -4 308 1 467 107 0 0 chr2 33086114 33086189 -220170394 + AluJ/FRAM SINE Alu 233 307 -5 2459 57 0 0 chr2 33086565 33086863 -220169720 - AluY SINE Alu -13 298 1 2171 98 7 3 chr2 33086907 33087202 -220169381 - AluSq SINE Alu -17 296 1 21 0 0 0 chr2 33087260 33087281 -220169302 + AT_rich Low_complexity Low_complexity 1 21 0 216 188 0 0 chr2 33087281 33087329 -220169254 + T-rich Low_complexity Low_complexity 1 48 0 1885 143 3 7 chr2 33087348 33087642 -220168941 - AluSx SINE Alu -19 293 1 693 207 0 37 chr2 33087812 33087947 -220168636 - FLAM_A SINE Alu -3 130 1 2170 132 0 3 chr2 33088080 33088391 -220168192 + AluSg SINE Alu 1 310 0 24 53 0 0 chr2 33088758 33088796 -220167787 + AT_rich Low_complexity Low_complexity 1 38 0 1843 141 10 33 chr2 33088874 33089040 -220167543 - AluSq SINE Alu -15 298 141 2306 106 3 0 chr2 33089040 33089343 -220167240 - AluSp SINE Alu -9 304 1 1843 141 10 33 chr2 33089343 33089481 -220167102 - AluSq SINE Alu -172 141 1 192 77 0 0 chr2 33089561 33089587 -220166996 + (A)n Simple_repeat Simple_repeat 1 26 0 1389 142 55 90 chr2 33089593 33089873 -220166710 + MER2 DNA MER2_type 13 280 -65 2043 119 51 0 chr2 33089873 33090167 -220166416 + AluSp SINE Alu 1 309 -4 1389 142 55 90 chr2 33090167 33090231 -220166352 + MER2 DNA MER2_type 280 345 0 2068 127 0 0 chr2 33090248 33090558 -220166025 + AluSx SINE Alu 1 310 0 309 293 108 19 chr2 33092295 33092452 -220164131 + MIR SINE MIR 56 226 -36 191 111 0 28 chr2 33092607 33092643 -220163940 + (TTTTC)n Simple_repeat Simple_repeat 1 35 0 224 321 0 0 chr2 33092643 33092696 -220163887 + C-rich Low_complexity Low_complexity 2 54 0 2188 116 3 3 chr2 33092697 33093000 -220163583 - AluSq SINE Alu -10 303 1 1694 163 13 46 chr2 33093000 33093307 -220163276 - AluJb SINE Alu -15 297 1 2036 154 3 0 chr2 33093636 33093941 -220162642 - AluSx SINE Alu -4 308 3 742 245 78 5 chr2 33094128 33094332 -220162251 - MIR SINE MIR -13 249 31 1187 158 0 0 chr2 33094651 33094834 -220161749 + AluSg/x SINE Alu 121 303 -7 4032 227 75 48 chr2 33095744 33096371 -220160212 - L1MEc LINE L1 -2168 4476 3867 2085 151 7 0 chr2 33096371 33096675 -220159908 - AluSx SINE Alu -6 306 1 4032 227 75 48 chr2 33096675 33096961 -220159622 - L1MEc LINE L1 -2777 3867 3590 2256 101 10 0 chr2 33096961 33097267 -220159316 - AluSc SINE Alu 0 309 1 4032 227 75 48 chr2 33097267 33098281 -220158302 - L1MEc LINE L1 -3054 3590 2532 548 291 67 21 chr2 33098525 33098805 -220157778 - L1ME3A LINE L1 -218 5952 5653 1861 111 42 17 chr2 33098805 33099093 -220157490 - AluSx SINE Alu -17 295 1 548 291 67 21 chr2 33099093 33099139 -220157444 - L1ME3A LINE L1 -517 5653 5611 1517 185 73 17 chr2 33099164 33099521 -220157062 - L1MB4 LINE L1 -12 6168 5792 2558 205 84 29 chr2 33099538 33100226 -220156357 + MER44D DNA MER2_type 8 605 0 2312 164 49 36 chr2 33100234 33100382 -220156201 - L1MB4 LINE L1 -433 5747 5602 2031 116 7 0 chr2 33100382 33100676 -220155907 - AluSq SINE Alu -17 296 1 2312 164 49 36 chr2 33100676 33101141 -220155442 - L1MB4 LINE L1 -578 5602 5127 831 244 20 34 chr2 33101130 33101425 -220155158 - L1MEc LINE L1 -5252 1290 1000 * 356 249 165 74 chr2 33101686 33101983 -220154600 - L1MEc LINE L1 -6028 618 295 833 260 89 46 chr2 33102144 33102184 -220154399 - L1M4c LINE L1 -4468 2670 2633 2365 92 0 3 chr2 33102184 33102487 -220154096 + AluSx SINE Alu 1 302 -10 833 260 89 46 chr2 33102487 33103132 -220153451 - L1M4c LINE L1 -4505 2633 1877 2228 77 0 11 chr2 33103138 33103449 -220153134 - AluSq SINE Alu 0 308 1 413 266 114 29 chr2 33103449 33103603 -220152980 - L1M4c LINE L1 -5248 1611 1471 180 0 0 0 chr2 33103603 33103623 -220152960 + (TG)n Simple_repeat Simple_repeat 2 21 0 413 266 114 29 chr2 33103623 33103764 -220152819 - L1M4c LINE L1 -5388 1471 1286 426 250 62 8 chr2 33104665 33104793 -220151790 + MIR SINE MIR 127 261 -1 23 33 0 0 chr2 33105164 33105194 -220151389 + AT_rich Low_complexity Low_complexity 1 30 0 29 28 0 0 chr2 33106041 33106077 -220150506 + AT_rich Low_complexity Low_complexity 1 36 0 195 42 0 0 chr2 33106666 33106690 -220149893 + (T)n Simple_repeat Simple_repeat 1 24 0 2377 106 0 0 chr2 33107047 33107359 -220149224 - AluSx SINE Alu 0 312 1 1339 287 155 26 chr2 33107655 33107998 -220148585 - L2 LINE L2 -102 3211 2914 2012 133 3 7 chr2 33107998 33108291 -220148292 + AluSx SINE Alu 2 293 -19 1339 287 155 26 chr2 33108291 33108338 -220148245 - L2 LINE L2 -399 2914 2874 1841 185 0 10 chr2 33108338 33108641 -220147942 + AluJb SINE Alu 1 300 -12 1339 287 155 26 chr2 33108641 33109143 -220147440 - L2 LINE L2 -439 2874 2190 182 211 0 26 chr2 33109171 33109209 -220147374 + MER5A DNA MER1_type 59 95 -94 1278 165 80 88 chr2 33110288 33110437 -220146146 - MER2 DNA MER2_type -5 340 191 1628 158 7 47 chr2 33110437 33110734 -220145849 + AluJo SINE Alu 9 293 -19 1278 165 80 88 chr2 33110734 33110923 -220145660 - MER2 DNA MER2_type -154 191 5 220 300 0 0 chr2 33110929 33110989 -220145594 + (TG)n Simple_repeat Simple_repeat 1 60 0 227 296 57 0 chr2 33111001 33111089 -220145494 - MER5B DNA MER1_type -80 98 6 1897 118 66 0 chr2 33112437 33112726 -220143857 - AluSx SINE Alu -4 308 1 1675 190 3 7 chr2 33112743 33113053 -220143530 - AluSx SINE Alu -3 309 1 1416 138 30 9 chr2 33113408 33113639 -220142944 - MER46A DNA MER2_type 0 236 1 186 227 182 0 chr2 33113686 33113730 -220142853 - L2 LINE L2 -33 3239 3188 887 131 0 0 chr2 33113825 33113955 -220142628 - FLAM_C SINE Alu -3 130 1 2381 62 7 10 chr2 33114419 33114723 -220141860 - AluY SINE Alu -8 303 1 557 228 214 34 chr2 33114726 33114932 -220141651 - MIR SINE MIR -18 244 2 204 208 0 42 chr2 33114933 33114981 -220141602 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 255 61 0 0 chr2 33115039 33115072 -220141511 + (TG)n Simple_repeat Simple_repeat 2 34 0 2051 119 3 0 chr2 33115756 33116041 -220140542 - AluSx SINE Alu -26 286 1 1655 169 11 7 chr2 33116615 33116922 -220139661 - AluSg SINE Alu 0 309 2 194 355 55 0 chr2 33117427 33117537 -220139046 + L2 LINE L2 3167 3282 -31 592 263 0 0 chr2 33117570 33117703 -220138880 + FLAM_A SINE Alu 1 133 0 1734 163 28 31 chr2 33118734 33119060 -220137523 - MER44D DNA MER2_type -4 605 11 242 290 0 0 chr2 33119751 33119820 -220136763 - Charlie8 DNA MER1_type -1000 1417 1349 21 0 0 0 chr2 33119895 33119916 -220136667 + AT_rich Low_complexity Low_complexity 1 21 0 1411 162 142 3 chr2 33119961 33120263 -220136320 + L1MA4 LINE L1 5952 6295 -5 521 167 0 0 chr2 33120467 33120551 -220136032 + AluJ/FLAM SINE Alu 1 84 -228 2291 88 7 0 chr2 33121723 33122019 -220134564 - AluSp SINE Alu -15 298 1 6484 79 19 33 chr2 33122615 33124556 -220132027 - SVA Other Other -520 1386 7 2087 76 62 4 chr2 33126060 33126336 -220130247 + AluY SINE Alu 1 292 -19 505 348 128 25 chr2 33126415 33126533 -220130050 + L2 LINE L2 2409 2513 -801 1848 177 30 15 chr2 33126533 33126872 -220129711 + MER2 DNA MER2_type 1 344 0 505 348 128 25 chr2 33126872 33127161 -220129422 + L2 LINE L2 2513 2858 -456 3431 220 164 4 chr2 33127181 33128373 -220128210 + Charlie1a DNA MER1_type 3 1454 -1 185 287 202 0 chr2 33128656 33128750 -220127833 + L2 LINE L2 3192 3304 -9 2333 78 7 10 chr2 33130960 33131266 -220125317 + AluY SINE Alu 1 305 -6 1499 123 0 26 chr2 33131278 33131505 -220125078 + AluSg/x SINE Alu 77 297 -15 311 273 40 55 chr2 33131844 33132015 -220124568 - L1ME3A LINE L1 -18 6221 6051 561 250 161 40 chr2 33132113 33132417 -220124166 - L1ME3A LINE L1 -243 5996 5656 244 286 36 0 chr2 33132519 33132631 -220123952 - L1ME3A LINE L1 -3433 2782 2667 870 241 41 57 chr2 33132736 33132795 -220123788 - L1MEc LINE L1 -3691 2524 2466 605 202 65 0 chr2 33132795 33132919 -220123664 - FLAM_A SINE Alu -1 132 1 870 241 41 57 chr2 33132919 33133308 -220123275 - L1MEc LINE L1 -3749 2466 2132 21 0 0 0 chr2 33133483 33133504 -220123079 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 33133812 33133834 -220122749 + AT_rich Low_complexity Low_complexity 1 22 0 246 231 43 113 chr2 33134041 33134297 -220122286 - L1MEc LINE L1 -4925 1471 1234 1694 186 16 7 chr2 33134547 33134853 -220121730 - AluSx SINE Alu -3 309 1 555 191 66 95 chr2 33134955 33135334 -220121249 - L1MB7 LINE L1 -77 6107 5634 595 234 75 108 chr2 33135346 33135997 -220120586 - L1MB7 LINE L1 -1441 4705 4076 453 58 14 72 chr2 33135997 33136136 -220120447 + (TA)n Simple_repeat Simple_repeat 2 132 0 2187 112 10 0 chr2 33136136 33136440 -220120143 - AluSx SINE Alu -5 307 1 1083 134 0 0 chr2 33136857 33137036 -220119547 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1607 172 42 0 chr2 33137068 33137207 -220119376 - AluSx SINE Alu -39 273 141 360 0 0 0 chr2 33137207 33137247 -220119336 + (TG)n Simple_repeat Simple_repeat 2 41 0 1607 172 42 0 chr2 33137247 33137369 -220119214 - AluSx SINE Alu -171 141 1 207 276 233 0 chr2 33137585 33137701 -220118882 + MIR SINE MIR 18 160 -102 25 0 0 0 chr2 33137904 33137929 -220118654 + AT_rich Low_complexity Low_complexity 1 25 0 2058 131 7 0 chr2 33138538 33138836 -220117747 + AluSx SINE Alu 1 300 -12 2048 137 9 49 chr2 33139652 33140002 -220116581 + MER1B DNA MER1_type 2 337 0 183 139 0 0 chr2 33140403 33140439 -220116144 + (CAG)n Simple_repeat Simple_repeat 1 36 0 24 0 0 0 chr2 33141044 33141068 -220115515 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr2 33141113 33141133 -220115450 + (T)n Simple_repeat Simple_repeat 1 20 0 805 190 0 65 chr2 33142677 33142701 -220113882 - FAM SINE Alu -139 172 148 2392 77 0 0 chr2 33142701 33143000 -220113583 + AluY SINE Alu 1 299 -12 805 190 0 65 chr2 33143000 33143159 -220113424 - FAM SINE Alu -163 148 1 23 54 0 0 chr2 33143666 33143703 -220112880 + AT_rich Low_complexity Low_complexity 1 37 0 2035 116 0 7 chr2 33147956 33148232 -220108351 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 33149112 33149134 -220107449 + AT_rich Low_complexity Low_complexity 1 22 0 180 286 0 36 chr2 33149213 33149269 -220107314 + MIR SINE MIR 91 144 -64 396 0 0 0 chr2 33149570 33149614 -220106969 + (TG)n Simple_repeat Simple_repeat 2 45 0 1789 171 3 13 chr2 33149615 33149919 -220106664 - AluJo SINE Alu -11 301 1 25 51 0 0 chr2 33150009 33150048 -220106535 + AT_rich Low_complexity Low_complexity 1 39 0 486 262 47 33 chr2 33150319 33150533 -220106050 + L1MC4 LINE L1 7683 7899 -143 1055 142 228 14 chr2 33150825 33151044 -220105539 + AluSg1 SINE Alu 35 300 -9 972 223 93 30 chr2 33151273 33151615 -220104968 + L1MD2 LINE L1 5972 7798 -10 25 90 0 0 chr2 33151739 33151806 -220104777 + AT_rich Low_complexity Low_complexity 1 67 0 900 161 0 0 chr2 33153480 33153617 -220102966 + FLAM_C SINE Alu 1 137 -6 24 0 0 0 chr2 33153781 33153805 -220102778 + AT_rich Low_complexity Low_complexity 1 24 0 2014 112 17 7 chr2 33153924 33154219 -220102364 + AluSc SINE Alu 3 300 -9 409 329 102 27 chr2 33154908 33155133 -220101450 + MIR SINE MIR 14 255 -7 218 213 0 0 chr2 33155807 33155854 -220100729 + T-rich Low_complexity Low_complexity 1 47 0 2226 119 0 3 chr2 33156492 33156803 -220099780 - AluSg SINE Alu 0 310 1 2340 103 0 0 chr2 33157348 33157650 -220098933 + AluY SINE Alu 1 302 -9 1951 149 3 0 chr2 33158784 33159080 -220097503 - AluSx SINE Alu -15 297 1 21 36 0 0 chr2 33159123 33159151 -220097432 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr2 33159175 33159199 -220097384 + AT_rich Low_complexity Low_complexity 1 24 0 1620 236 96 31 chr2 33159244 33159820 -220096763 - L1MC4 LINE L1 -141 7901 7289 399 205 0 7 chr2 33159845 33159927 -220096656 - AluSx SINE Alu -28 274 199 647 170 0 0 chr2 33159933 33160039 -220096544 - AluSx SINE Alu -207 106 1 1937 124 19 10 chr2 33160134 33160441 -220096142 + AluSx SINE Alu 1 310 -2 335 178 0 75 chr2 33160527 33160564 -220096019 - L1MB3 LINE L1 0 6183 6145 609 220 23 15 chr2 33160564 33160696 -220095887 - FLAM_A SINE Alu 0 133 1 335 178 0 75 chr2 33160696 33160765 -220095818 - L1MB3 LINE L1 -38 6145 6085 1286 276 108 25 chr2 33160773 33161263 -220095320 - L1MC4 LINE L1 -1040 7002 6472 824 168 13 0 chr2 33162107 33162256 -220094327 - MER58B DNA MER1_type -8 333 183 208 319 239 0 chr2 33162713 33162826 -220093757 - L3 LINE CR1 -50 1527 1388 509 240 19 0 chr2 33163025 33163129 -220093454 - MER5B DNA MER1_type -63 115 10 1164 194 5 14 chr2 33163925 33164141 -220092442 + AluJo SINE Alu 5 218 -94 26 30 0 0 chr2 33164883 33164916 -220091667 + AT_rich Low_complexity Low_complexity 1 33 0 40 73 0 0 chr2 33165289 33165371 -220091212 + AT_rich Low_complexity Low_complexity 1 82 0 949 153 89 0 chr2 33165392 33165549 -220091034 + AluSx SINE Alu 1 171 -141 1801 137 47 0 chr2 33166128 33166405 -220090178 + AluSx SINE Alu 1 290 -22 268 258 175 0 chr2 33168105 33168202 -220088381 - L2 LINE L2 0 3313 3200 222 348 22 0 chr2 33168952 33169044 -220087539 + MIR SINE MIR 57 150 -112 2347 82 0 0 chr2 33170095 33170388 -220086195 - AluSc SINE Alu -16 293 1 1435 168 7 56 chr2 33170482 33170786 -220085797 + AluJo SINE Alu 1 289 -23 1003 269 57 60 chr2 33171380 33171703 -220084880 - L1MEc LINE L1 -896 5319 4997 2170 72 35 14 chr2 33171703 33171993 -220084590 - AluY SINE Alu -15 296 1 1003 269 57 60 chr2 33171993 33172096 -220084487 - L1MEc LINE L1 -1218 4997 4895 1872 152 14 0 chr2 33172096 33172386 -220084197 - AluSx SINE Alu -18 294 1 1003 269 57 60 chr2 33172386 33172672 -220083911 - L1MEc LINE L1 -1320 4895 4608 709 302 24 39 chr2 33172665 33173046 -220083537 - L1MEc LINE L1 -1925 4290 3916 * 420 290 26 34 chr2 33173047 33173179 -220083404 - FLAM_A SINE Alu -11 122 5 394 265 211 8 chr2 33173278 33173671 -220082912 - L1MEc LINE L1 -2544 3671 3199 648 247 76 35 chr2 33173750 33173923 -220082660 - L1MEc LINE L1 -4124 2272 2108 1421 175 52 28 chr2 33173923 33174214 -220082369 - AluSx SINE Alu -14 298 1 648 247 76 35 chr2 33174214 33174409 -220082174 - L1MEc LINE L1 -4288 2108 1889 23 0 0 0 chr2 33174418 33174441 -220082142 + AT_rich Low_complexity Low_complexity 1 23 0 1507 198 24 3 chr2 33174454 33174742 -220081841 - AluSg SINE Alu -16 294 1 862 138 0 22 chr2 33174742 33174880 -220081703 - AluSq/x SINE Alu -177 135 1 312 70 0 0 chr2 33175362 33175405 -220081178 + (TC)n Simple_repeat Simple_repeat 2 44 0 516 148 0 0 chr2 33176202 33176283 -220080300 - AluSq SINE Alu -99 214 134 1279 111 25 64 chr2 33176283 33176457 -220080126 - AluSg/x SINE Alu -14 296 132 2180 123 7 3 chr2 33176457 33176767 -220079816 - AluSx SINE Alu -1 311 1 1279 111 25 64 chr2 33176767 33176827 -220079756 - AluSg/x SINE Alu -178 132 71 846 102 0 0 chr2 33177425 33177533 -220079050 - AluSq/x SINE Alu -205 108 1 2238 89 7 0 chr2 33179271 33179584 -220076999 - AluSq SINE Alu 0 315 1 1304 172 94 4 chr2 33179747 33179892 -220076691 - AluSx SINE Alu -21 291 160 399 21 0 0 chr2 33179892 33179940 -220076643 + (TG)n Simple_repeat Simple_repeat 2 49 0 1304 172 94 4 chr2 33179940 33180061 -220076522 - AluSx SINE Alu -152 160 1 2395 63 0 16 chr2 33180248 33180576 -220076007 + AluY SINE Alu 1 311 0 1586 167 24 10 chr2 33181722 33182010 -220074573 - AluJo SINE Alu -20 292 1 284 300 164 0 chr2 33182611 33182751 -220073832 + MIR SINE MIR 11 173 -89 1961 161 0 13 chr2 33183010 33183326 -220073257 + AluSx SINE Alu 1 312 0 243 0 0 0 chr2 33184139 33184166 -220072417 + (T)n Simple_repeat Simple_repeat 1 27 0 1779 118 65 0 chr2 33184665 33184944 -220071639 + AluY SINE Alu 1 297 -14 2050 140 0 0 chr2 33185115 33185415 -220071168 - AluSg SINE Alu -10 300 1 1610 121 125 8 chr2 33185993 33186241 -220070342 - AluSg1 SINE Alu -32 277 1 342 67 0 0 chr2 33187046 33187091 -220069492 + (T)n Simple_repeat Simple_repeat 1 45 0 2039 103 3 68 chr2 33187171 33187492 -220069091 - AluY SINE Alu -11 300 1 27 29 0 0 chr2 33187663 33187697 -220068886 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 33187850 33187871 -220068712 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 33188375 33188403 -220068180 + AT_rich Low_complexity Low_complexity 1 28 0 355 259 46 46 chr2 33188410 33188541 -220068042 + MER20B DNA MER1_type 52 182 -601 1462 148 53 42 chr2 33189360 33189491 -220067092 + AluJo SINE Alu 5 133 -179 2277 92 0 3 chr2 33189491 33189783 -220066800 + AluSg SINE Alu 1 291 -19 1462 148 53 42 chr2 33189783 33189934 -220066649 + AluJo SINE Alu 133 290 -22 1169 226 0 15 chr2 33189936 33190202 -220066381 + AluJo SINE Alu 36 297 -15 192 125 0 0 chr2 33190672 33190704 -220065879 + (TA)n Simple_repeat Simple_repeat 2 33 0 2271 109 0 7 chr2 33192094 33192396 -220064187 + AluSx SINE Alu 1 300 -12 414 75 0 0 chr2 33192416 33192469 -220064114 + Alu SINE Alu 243 295 -17 26 64 0 0 chr2 33192529 33192576 -220064007 + AT_rich Low_complexity Low_complexity 1 47 0 25 31 0 0 chr2 33192848 33192880 -220063703 + AT_rich Low_complexity Low_complexity 1 32 0 1682 169 0 36 chr2 33192911 33193212 -220063371 + AluJb SINE Alu 1 290 -22 1133 165 55 77 chr2 33193454 33193727 -220062856 - AluJb SINE Alu -29 283 17 2100 118 0 16 chr2 33195367 33195680 -220060903 - AluSx SINE Alu -4 308 1 181 347 40 0 chr2 33195743 33195818 -220060765 - L2 LINE L2 -19 3253 3176 315 311 61 23 chr2 33196000 33196132 -220060451 - L2 LINE L2 -1004 2310 2174 26 0 0 0 chr2 33196240 33196266 -220060317 + AT_rich Low_complexity Low_complexity 1 26 0 1814 156 11 0 chr2 33196398 33196681 -220059902 + AluSx SINE Alu 1 286 -26 497 96 12 0 chr2 33197172 33197255 -220059328 + FLAM_C SINE Alu 60 143 0 2132 107 9 35 chr2 33197325 33197642 -220058941 - AluSx SINE Alu -3 309 1 246 326 61 11 chr2 33197686 33197867 -220058716 - L1MEc LINE L1 -4907 1477 1288 817 212 53 12 chr2 33198063 33198308 -220058275 - L1MEc LINE L1 -5511 1052 798 231 195 110 37 chr2 33198360 33198442 -220058141 + Charlie5 DNA MER1_type 35 122 -2490 685 286 125 21 chr2 33198585 33199008 -220057575 - L1MEc LINE L1 -5873 690 224 25 75 0 0 chr2 33199059 33199112 -220057471 + AT_rich Low_complexity Low_complexity 1 53 0 1623 199 34 0 chr2 33199634 33199925 -220056658 + AluJb SINE Alu 1 301 -11 207 328 216 29 chr2 33200285 33200456 -220056127 + MIR SINE MIR 41 243 -19 22 35 0 0 chr2 33201015 33201044 -220055539 + AT_rich Low_complexity Low_complexity 1 29 0 15494 129 48 17 chr2 33201932 33204083 -220052500 + Tigger4(Zombi) DNA MER2_type 1 2250 -481 2330 99 0 0 chr2 33204083 33204386 -220052197 - AluSq SINE Alu -10 303 1 15494 129 48 17 chr2 33204386 33204883 -220051700 + Tigger4(Zombi) DNA MER2_type 2250 2730 -1 301 157 0 71 chr2 33205018 33205088 -220051495 - BSR/Beta Satellite Satellite -33 109 45 * 692 253 60 0 chr2 33205072 33205238 -220051345 + MER58A DNA MER1_type 34 209 -15 326 231 147 45 chr2 33206059 33206083 -220050500 - L1ME4a LINE L1 -238 5883 5863 1960 138 3 0 chr2 33206083 33206372 -220050211 - AluSx SINE Alu -22 290 1 326 231 147 45 chr2 33206372 33206503 -220050080 - L1ME4a LINE L1 -258 5863 5712 291 283 0 12 chr2 33206888 33207009 -220049574 - MER5A DNA MER1_type 0 189 13 333 0 0 0 chr2 33207997 33208034 -220048549 + (TG)n Simple_repeat Simple_repeat 1 37 0 1757 216 47 20 chr2 33208067 33208517 -220048066 - MLT1C LTR MaLR -5 462 1 2173 214 25 101 chr2 33208737 33209447 -220047136 + MLT1-int LTR MaLR 5 660 -711 351 177 0 0 chr2 33209500 33209562 -220047021 + MLT1-int LTR MaLR 661 722 -649 1130 205 57 4 chr2 33209572 33209801 -220046782 + MLT1D LTR MaLR 265 505 0 284 216 135 0 chr2 33209805 33209879 -220046704 - L1M4 LINE L1 -2440 3706 3623 2144 113 0 0 chr2 33209970 33210254 -220046329 + AluSq SINE Alu 17 300 -13 380 282 84 93 chr2 33210277 33210311 -220046272 + L1M4c LINE L1 1136 1169 -5215 2462 90 0 0 chr2 33210311 33210622 -220045961 + AluSx SINE Alu 1 311 -1 380 282 84 93 chr2 33210622 33210888 -220045695 + L1M4c LINE L1 1169 1433 -4951 623 199 7 29 chr2 33210888 33211024 -220045559 + FLAM_A SINE Alu 1 133 0 380 282 84 93 chr2 33211024 33211151 -220045432 + L1M4c LINE L1 1433 1560 -4824 7392 31 2 0 chr2 33211172 33213054 -220043529 - L1PA4 LINE L1 0 6155 4221 2099 29 85 0 chr2 33213053 33213325 -220043258 + L1P LINE L1 2544 2838 -3308 * 2389 62 7 3 chr2 33213547 33213853 -220042730 + AluY SINE Alu 1 307 -4 244 313 148 68 chr2 33213853 33214252 -220042331 + L1ME LINE L1 229 659 -5546 1654 127 93 4 chr2 33214511 33214770 -220041813 + AluSx SINE Alu 1 282 -30 294 73 0 0 chr2 33214771 33214812 -220041771 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 323 267 0 11 chr2 33214819 33214909 -220041674 + L1ME LINE L1 2271 2359 -4037 1968 260 99 15 chr2 33214971 33215930 -220040653 + L1ME LINE L1 2449 3488 -2727 394 321 51 33 chr2 33216485 33216759 -220039824 - L1ME3 LINE L1 -203 5959 5681 779 211 126 82 chr2 33217627 33217969 -220038614 - L1MC4 LINE L1 -142 7900 7544 2069 248 86 8 chr2 33217974 33218623 -220037960 + L1MC4 LINE L1 6658 7357 -685 2050 128 24 0 chr2 33218664 33218962 -220037621 - AluSx SINE Alu -7 305 1 201 147 0 0 chr2 33220332 33220366 -220036217 + (T)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr2 33220380 33220417 -220036166 + AT_rich Low_complexity Low_complexity 1 37 0 333 192 0 0 chr2 33220640 33220692 -220035891 - Tigger2 DNA MER2_type -2666 52 1 413 172 21 0 chr2 33220770 33220863 -220035720 - L1MA4A LINE L1 -5 6298 6204 329 283 131 7 chr2 33222062 33222160 -220034423 + L1ME LINE L1 4200 4285 -1930 2241 117 0 0 chr2 33222160 33222460 -220034123 + AluSq SINE Alu 1 300 -13 329 283 131 7 chr2 33222460 33222644 -220033939 + L1ME LINE L1 4285 4517 -1698 1240 179 0 0 chr2 33222661 33222856 -220033727 + AluSx SINE Alu 3 197 -115 316 255 132 9 chr2 33222914 33223020 -220033563 + L1ME LINE L1 4630 4748 -1467 1904 195 99 2 chr2 33223209 33223645 -220032938 - L1MB5 LINE L1 -155 6019 5542 24 32 0 0 chr2 33223914 33223945 -220032638 + AT_rich Low_complexity Low_complexity 1 31 0 805 68 10 0 chr2 33224228 33224331 -220032252 - AluSg/x SINE Alu -8 302 199 2103 114 3 3 chr2 33224362 33224652 -220031931 + AluSq SINE Alu 1 290 -23 21 36 0 0 chr2 33225021 33225049 -220031534 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 33226379 33226400 -220030183 + AT_rich Low_complexity Low_complexity 1 21 0 253 222 0 0 chr2 33227042 33227105 -220029478 + (TAAA)n Simple_repeat Simple_repeat 4 66 0 1922 154 3 0 chr2 33227152 33227444 -220029139 - AluSx SINE Alu -19 293 1 575 226 39 0 chr2 33227605 33227760 -220028823 - L1MC4 LINE L1 -372 7670 7510 540 163 0 0 chr2 33228584 33228670 -220027913 + AluSg/x SINE Alu 205 290 -19 237 238 0 0 chr2 33228717 33228780 -220027803 + (TTTA)n Simple_repeat Simple_repeat 4 66 0 1436 87 0 0 chr2 33228906 33229090 -220027493 + AluSp SINE Alu 130 313 0 2011 108 3 24 chr2 33229250 33229545 -220027038 - AluSx SINE Alu -12 300 12 27 29 0 0 chr2 33230900 33230934 -220025649 + AT_rich Low_complexity Low_complexity 1 34 0 656 188 45 0 chr2 33231101 33231213 -220025370 + FLAM_C SINE Alu 9 125 -18 2005 98 41 3 chr2 33231221 33231516 -220025067 + AluSg SINE Alu 1 306 -4 1253 127 229 0 chr2 33231551 33231796 -220024787 + AluJb SINE Alu 1 301 -11 1931 127 38 3 chr2 33232529 33232821 -220023762 + AluSx SINE Alu 1 302 -10 335 191 0 0 chr2 33234164 33234227 -220022356 - L1MA10 LINE L1 -19 6315 6253 22 0 0 0 chr2 33235580 33235602 -220020981 + AT_rich Low_complexity Low_complexity 1 22 0 2034 102 28 7 chr2 33235602 33235885 -220020698 + AluSx SINE Alu 1 289 -23 1330 212 52 7 chr2 33236443 33236731 -220019852 - AluJo SINE Alu -11 301 1 2264 92 0 0 chr2 33236780 33237073 -220019510 + AluSg SINE Alu 1 293 -17 2047 141 7 0 chr2 33237093 33237399 -220019184 - AluSx SINE Alu -1 311 4 31 0 0 0 chr2 33237586 33237617 -220018966 + AT_rich Low_complexity Low_complexity 1 31 0 2248 92 3 0 chr2 33237626 33237918 -220018665 + AluSg SINE Alu 2 294 -16 21 0 0 0 chr2 33238099 33238120 -220018463 + AT_rich Low_complexity Low_complexity 1 21 0 2831 157 63 10 chr2 33238176 33238781 -220017802 - L1MC2 LINE L1 -31 6313 5677 609 290 41 5 chr2 33238780 33239001 -220017582 - L1M4 LINE L1 -1326 4820 4592 * 21 57 0 0 chr2 33239347 33239382 -220017201 + AT_rich Low_complexity Low_complexity 1 35 0 1624 248 22 30 chr2 33239503 33239659 -220016924 - L1MB8 LINE L1 -5 6173 6017 2327 96 3 0 chr2 33239659 33239962 -220016621 + AluSq SINE Alu 1 304 -9 1624 248 22 30 chr2 33239962 33240538 -220016045 - L1MB8 LINE L1 -161 6017 5324 1281 243 34 89 chr2 33240530 33241003 -220015580 - L1M4b LINE L1 -6392 467 21 * 2530 117 14 0 chr2 33241502 33241870 -220014713 - THE1C LTR MaLR -2 373 1 462 197 0 0 chr2 33242134 33242210 -220014373 - AluJ/FRAM SINE Alu -21 291 216 1524 179 33 7 chr2 33242241 33242515 -220014068 - AluJo SINE Alu -31 281 1 2110 117 17 0 chr2 33242832 33243130 -220013453 - AluSx SINE Alu -7 305 3 787 219 91 0 chr2 33243254 33243441 -220013142 + MER3 DNA MER1_type 6 209 0 2239 96 0 35 chr2 33243682 33243994 -220012589 + AluY SINE Alu 1 301 -10 1591 180 3 7 chr2 33244093 33244377 -220012206 + AluJb SINE Alu 23 305 -7 2006 142 3 0 chr2 33244425 33244720 -220011863 + AluSq SINE Alu 1 296 -17 447 161 25 0 chr2 33244737 33244818 -220011765 - L1PB3 LINE L1 -59 6095 6013 1880 148 3 20 chr2 33244847 33245151 -220011432 - AluSx SINE Alu -13 299 1 309 188 0 0 chr2 33245151 33245215 -220011368 - L1M4 LINE L1 -1681 4465 4402 27 29 0 0 chr2 33245217 33245251 -220011332 + AT_rich Low_complexity Low_complexity 1 34 0 1581 195 0 11 chr2 33245251 33245528 -220011055 - AluJo SINE Alu -32 280 7 2865 196 48 3 chr2 33245537 33246156 -220010427 - L1M4 LINE L1 -1736 4410 3764 25 31 0 0 chr2 33246156 33246188 -220010395 + AT_rich Low_complexity Low_complexity 1 32 0 887 170 0 0 chr2 33246205 33246346 -220010237 - AluSq/x SINE Alu -171 141 1 1995 127 3 3 chr2 33246347 33246661 -220009922 - AluSx SINE Alu 0 314 1 1268 206 58 8 chr2 33246685 33246824 -220009759 - AluJo SINE Alu -37 275 144 243 0 0 0 chr2 33246824 33246851 -220009732 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1268 206 58 8 chr2 33246851 33246968 -220009615 - AluJo SINE Alu -168 144 6 932 220 28 4 chr2 33246968 33247223 -220009360 - L1M4 LINE L1 -2351 3795 3535 804 225 0 0 chr2 33247690 33247863 -220008720 - AluSc SINE Alu -136 173 1 2032 131 3 3 chr2 33247981 33248279 -220008304 + AluSx SINE Alu 5 302 -10 406 200 11 22 chr2 33248732 33248822 -220007761 + MIR SINE MIR 103 191 -71 204 215 92 0 chr2 33248864 33248929 -220007654 + MIR SINE MIR 186 256 -6 2280 85 0 0 chr2 33248932 33249226 -220007357 + AluSg SINE Alu 1 294 -16 27 49 0 0 chr2 33250289 33250330 -220006253 + GC_rich Low_complexity Low_complexity 1 41 0 1196 92 0 6 chr2 33251050 33251223 -220005360 + AluSg/x SINE Alu 129 300 -10 232 218 13 13 chr2 33251758 33251836 -220004747 + CT-rich Low_complexity Low_complexity 1 78 0 1832 132 3 26 chr2 33252010 33252313 -220004270 - AluJb SINE Alu -12 300 5 920 117 0 7 chr2 33252313 33252450 -220004133 - AluJo SINE Alu -171 141 6 1665 142 10 35 chr2 33252595 33252905 -220003678 + AluSx SINE Alu 1 302 -10 2300 75 3 0 chr2 33252943 33253236 -220003347 + AluSp SINE Alu 1 294 -19 26 30 0 0 chr2 33253564 33253597 -220002986 + AT_rich Low_complexity Low_complexity 1 33 0 771 164 17 0 chr2 33253602 33253718 -220002865 - AluJb SINE Alu -194 118 1 497 245 36 0 chr2 33253730 33253869 -220002714 - L1ME3A LINE L1 -300 5870 5727 286 305 116 0 chr2 33253961 33254056 -220002527 + MIR SINE MIR 6 111 -151 36 23 0 0 chr2 33254114 33254157 -220002426 + AT_rich Low_complexity Low_complexity 1 43 0 694 188 0 62 chr2 33254160 33254304 -220002279 - FLAM_C SINE Alu -6 137 3 21 36 0 0 chr2 33254304 33254332 -220002251 + AT_rich Low_complexity Low_complexity 1 28 0 1083 139 0 0 chr2 33254364 33254529 -220002054 - AluJb SINE Alu -6 306 142 2358 65 0 13 chr2 33254537 33254844 -220001739 - AluY SINE Alu -8 303 1 991 139 6 35 chr2 33255024 33255197 -220001386 - FRAM SINE Alu -9 167 1 1840 106 38 0 chr2 33255437 33255701 -220000882 + AluSc SINE Alu 1 274 -35 1285 124 0 5 chr2 33255701 33255906 -220000677 + AluSg/x SINE Alu 103 308 -301 1943 130 3 0 chr2 33255906 33256191 -220000392 + AluSx SINE Alu 1 286 -26 1285 124 0 5 chr2 33256191 33256209 -220000374 + AluSg/x SINE Alu 308 609 0 22 0 0 0 chr2 33256981 33257003 -219999580 + AT_rich Low_complexity Low_complexity 1 22 0 589 221 7 0 chr2 33257053 33257193 -219999390 - MER113 DNA MER1_type? -223 298 158 1091 181 9 19 chr2 33257215 33257265 -219999318 + AluJb SINE Alu 85 134 -178 2336 70 0 0 chr2 33257265 33257565 -219999018 + AluY SINE Alu 1 300 -11 1091 181 9 19 chr2 33257565 33257730 -219998853 + AluJb SINE Alu 134 298 -14 2016 118 16 0 chr2 33258056 33258361 -219998222 + AluSg SINE Alu 1 310 0 914 183 0 27 chr2 33258361 33258528 -219998055 + AluSg/x SINE Alu 132 295 -17 2270 101 0 0 chr2 33258528 33258836 -219997747 + AluSg SINE Alu 1 308 -2 914 183 0 27 chr2 33258836 33258854 -219997729 + AluSg/x SINE Alu 295 312 0 782 161 0 0 chr2 33259494 33259606 -219996977 + FLAM_C SINE Alu 2 113 -30 23 42 0 21 chr2 33259610 33259631 -219996952 + AT_rich Low_complexity Low_complexity 1 21 -26 2128 101 0 0 chr2 33259631 33259918 -219996665 + AluSg SINE Alu 1 287 -23 23 42 0 21 chr2 33259918 33259944 -219996639 + AT_rich Low_complexity Low_complexity 21 47 0 2088 105 10 0 chr2 33259944 33260239 -219996344 + AluSx SINE Alu 1 298 -14 2105 100 7 0 chr2 33260306 33260605 -219995978 + AluSp SINE Alu 1 301 -12 1118 253 57 64 chr2 33260780 33261135 -219995448 + L1MEc LINE L1 136 489 -5907 2564 143 34 2 chr2 33261135 33261548 -219995035 - MSTB LTR MaLR 0 426 1 1118 253 57 64 chr2 33261548 33261631 -219994952 + L1MEc LINE L1 489 571 -5825 2034 121 13 0 chr2 33261633 33261931 -219994652 + AluSq SINE Alu 2 303 -10 452 70 0 0 chr2 33261935 33261992 -219994591 + AluSg/x SINE Alu 192 248 -62 1021 164 17 59 chr2 33261992 33262230 -219994353 + AluJo SINE Alu 85 312 0 1917 106 46 3 chr2 33262238 33262520 -219994063 + AluSc SINE Alu 2 295 -14 1922 143 3 13 chr2 33262567 33262882 -219993701 + AluSx SINE Alu 1 312 0 1471 167 35 7 chr2 33262899 33263181 -219993402 - AluJb SINE Alu -11 301 12 356 225 15 10 chr2 33263191 33263298 -219993285 + L1M2c LINE L1 1317 1798 -4585 2367 60 7 3 chr2 33263304 33263604 -219992979 + AluY SINE Alu 1 301 -10 1419 77 0 10 chr2 33263605 33263800 -219992783 + AluY SINE Alu 106 298 -13 968 259 128 29 chr2 33263802 33264215 -219992368 + L1MEc LINE L1 1399 1852 -4544 1224 159 49 9 chr2 33264224 33264450 -219992133 - AluJb SINE Alu -18 294 60 2180 93 17 0 chr2 33264475 33264766 -219991817 - AluSx SINE Alu -16 296 1 21 0 0 0 chr2 33264861 33264882 -219991701 + AT_rich Low_complexity Low_complexity 1 21 0 340 253 24 0 chr2 33264925 33265008 -219991575 - MIR SINE MIR -140 122 38 1689 79 162 26 chr2 33265049 33265314 -219991269 - AluSx SINE Alu -1 301 1 538 214 0 0 chr2 33265351 33265454 -219991129 - AluJb SINE Alu -30 282 180 2140 110 7 0 chr2 33265553 33265861 -219990722 - AluSx SINE Alu -1 311 2 2034 84 3 78 chr2 33267872 33268058 -219988525 - AluSg SINE Alu -13 297 143 2189 85 0 41 chr2 33268058 33268375 -219988208 - AluSc SINE Alu -4 305 2 2034 84 3 78 chr2 33268375 33268509 -219988074 - AluSg SINE Alu -167 143 1 701 147 199 0 chr2 33268859 33268994 -219987589 + AluJb SINE Alu 135 296 -16 450 194 163 10 chr2 33268994 33269092 -219987491 + AluY SINE Alu 1 113 -198 22 56 0 0 chr2 33269094 33269130 -219987453 + AT_rich Low_complexity Low_complexity 1 36 0 1029 197 24 5 chr2 33269289 33269502 -219987081 + AluJo SINE Alu 86 302 -10 2348 78 0 3 chr2 33269663 33269972 -219986611 - AluY SINE Alu -3 308 1 1878 125 17 3 chr2 33270106 33270395 -219986188 + AluSx SINE Alu 1 293 -19 1392 171 65 7 chr2 33270459 33270734 -219985849 + AluJb SINE Alu 1 291 -21 1724 82 129 0 chr2 33271150 33271406 -219985177 + AluSc SINE Alu 1 289 -20 1958 133 0 0 chr2 33271596 33271897 -219984686 + AluSx SINE Alu 1 301 -11 817 224 60 35 chr2 33272223 33272525 -219984058 + MLT2D LTR ERVL 1 511 -43 215 276 78 26 chr2 33272919 33273035 -219983548 - L2 LINE L2 -817 2497 2376 451 239 46 23 chr2 33274720 33274850 -219981733 - AluJb SINE Alu -37 275 143 1746 156 10 23 chr2 33274856 33275163 -219981420 - AluSx SINE Alu -9 303 1 1999 138 0 3 chr2 33275230 33275534 -219981049 + AluJb SINE Alu 1 303 -9 282 180 67 4 chr2 33275978 33276090 -219980493 + AluJo SINE Alu 1 136 -166 2412 37 3 13 chr2 33276090 33276388 -219980195 + AluY SINE Alu 1 295 -16 1776 87 0 12 chr2 33276395 33276636 -219979947 + AluY SINE Alu 54 291 -20 839 154 7 20 chr2 33276740 33276889 -219979694 + FRAM SINE Alu 1 40 0 2405 44 0 34 chr2 33277063 33277384 -219979199 + AluY SINE Alu 1 310 -1 2214 31 38 17 chr2 33277501 33277792 -219978791 + AluY SINE Alu 1 297 -14 266 320 0 31 chr2 33279175 33279272 -219977311 + MIR3 SINE MIR 70 163 -45 251 245 286 10 chr2 33279334 33279432 -219977151 - MIR SINE MIR -68 140 16 822 216 12 6 chr2 33279711 33279873 -219976710 - FRAM SINE Alu -16 160 1 225 0 0 0 chr2 33279873 33279898 -219976685 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2098 89 0 3 chr2 33279898 33280180 -219976403 - AluSc SINE Alu -28 281 1 7531 74 2 1 chr2 33280223 33281191 -219975392 + LTR5 LTR ERVK 1 969 0 1853 104 43 4 chr2 33281558 33281837 -219974746 - AluSg SINE Alu -14 296 7 863 307 184 13 chr2 33281866 33282517 -219974066 + L2 LINE L2 2397 3176 -137 2186 103 3 0 chr2 33282518 33282818 -219973765 - AluSg SINE Alu -9 301 1 3363 146 82 63 chr2 33282855 33283459 -219973124 + L1MB8 LINE L1 5417 6039 -139 1697 158 0 14 chr2 33283459 33283743 -219972840 - AluJb SINE Alu -20 292 13 3363 146 82 63 chr2 33283743 33283886 -219972697 + L1MB8 LINE L1 6039 6178 0 500 217 191 0 chr2 33283990 33284147 -219972436 + MIR SINE MIR 52 238 -24 340 233 0 0 chr2 33284215 33284275 -219972308 + MLT1D LTR MaLR 1 60 -445 1234 137 64 5 chr2 33284275 33284479 -219972104 - MLT1A1 LTR MaLR 0 365 150 802 150 0 14 chr2 33284479 33284619 -219971964 - FRAM SINE Alu -6 170 33 325 78 0 0 chr2 33284623 33284674 -219971909 - L1MA3 LINE L1 0 6305 6255 860 161 40 7 chr2 33284676 33284825 -219971758 - MLT1A1 LTR MaLR -211 154 1 1561 101 22 9 chr2 33284952 33285180 -219971403 + AluSq SINE Alu 1 231 -82 363 23 0 0 chr2 33285197 33285241 -219971342 + (TC)n Simple_repeat Simple_repeat 2 45 0 207 0 0 0 chr2 33285240 33285263 -219971320 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 879 223 96 0 chr2 33285274 33285581 -219971002 + L1ME4a LINE L1 5136 5462 -702 265 209 105 9 chr2 33285579 33285684 -219970899 + L1ME4a LINE L1 6002 6116 -5 * 1627 181 0 17 chr2 33285692 33285990 -219970593 + AluJo SINE Alu 1 293 -19 1879 161 24 24 chr2 33286039 33286374 -219970209 - MER1B DNA MER1_type 0 337 3 1705 125 3 66 chr2 33286557 33286883 -219969700 - AluSx SINE Alu 0 307 1 2085 116 0 10 chr2 33286893 33287196 -219969387 - AluSx SINE Alu -12 300 1 277 233 78 22 chr2 33287523 33287613 -219968970 - LTR67 LTR ERVL -453 104 10 1963 139 0 3 chr2 33287613 33287907 -219968676 + AluSx SINE Alu 1 293 -19 308 313 47 16 chr2 33287995 33288123 -219968460 - L3 LINE CR1 -291 1286 1155 439 167 35 11 chr2 33288227 33288401 -219968182 + (TA)n Simple_repeat Simple_repeat 1 178 0 32 26 0 0 chr2 33288405 33288444 -219968139 + AT_rich Low_complexity Low_complexity 1 39 0 2036 110 10 0 chr2 33288518 33288817 -219967766 + AluSq SINE Alu 1 302 -11 1184 107 0 6 chr2 33288819 33288987 -219967596 + AluSg/x SINE Alu 136 302 -8 218 320 200 11 chr2 33289232 33289407 -219967176 - MIR SINE MIR -52 210 3 1543 221 131 13 chr2 33289631 33290083 -219966500 - MLT1D LTR MaLR 0 505 1 336 264 46 61 chr2 33290125 33290176 -219966407 - L1ME4a LINE L1 -5 6116 6066 1639 160 3 21 chr2 33290176 33290526 -219966057 + AluSx SINE Alu 1 345 0 336 264 46 61 chr2 33290526 33290670 -219965913 - L1ME4a LINE L1 -55 6066 5923 2214 109 3 3 chr2 33291291 33291603 -219964980 + AluSx SINE Alu 1 312 0 2298 74 3 3 chr2 33292318 33292617 -219963966 - AluSg SINE Alu -11 299 1 309 308 10 29 chr2 33292649 33292753 -219963830 - MIR3 SINE MIR -6 202 101 253 318 23 0 chr2 33292837 33292925 -219963658 - MIR SINE MIR -73 135 46 927 180 126 24 chr2 33292959 33293283 -219963300 - MLT1B LTR MaLR -2 503 1 353 301 116 14 chr2 33293409 33293555 -219963028 - MIR SINE MIR -74 188 28 473 136 0 0 chr2 33293755 33293821 -219962762 + AluS SINE Alu 1 66 -247 33 0 0 0 chr2 33293821 33293854 -219962729 + AT_rich Low_complexity Low_complexity 1 33 0 1968 142 0 3 chr2 33293976 33294278 -219962305 - AluSx SINE Alu -11 301 1 182 245 113 19 chr2 33294576 33294629 -219961954 - MIR SINE MIR -185 77 20 2376 72 0 0 chr2 33294662 33294969 -219961614 - AluSc SINE Alu -1 308 2 388 228 37 44 chr2 33294980 33295116 -219961467 + Charlie8 DNA MER1_type 61 195 -2222 253 266 109 120 chr2 33295324 33295508 -219961075 + MIR SINE MIR 3 184 -78 751 107 90 25 chr2 33295555 33295677 -219960906 + AluSq/x SINE Alu 2 131 -182 2226 105 0 0 chr2 33295679 33295983 -219960600 + AluSx SINE Alu 1 304 -8 2368 88 0 0 chr2 33295987 33296319 -219960264 + AluY SINE Alu 2 333 0 1999 138 0 3 chr2 33296322 33296633 -219959950 + AluSx SINE Alu 1 310 -2 561 236 0 0 chr2 33296640 33296750 -219959833 + MER96B DNA MER1_type? 307 416 -1 653 309 94 59 chr2 33296751 33297085 -219959498 + L2 LINE L2 2652 2973 -340 2032 120 17 3 chr2 33297085 33297385 -219959198 - AluSx SINE Alu -8 304 1 653 309 94 59 chr2 33297385 33297680 -219958903 + L2 LINE L2 2973 3295 -18 843 153 0 0 chr2 33297687 33297818 -219958765 + FLAM_C SINE Alu 1 131 -2 1926 137 0 13 chr2 33298161 33298460 -219958123 + AluSx SINE Alu 1 295 -17 308 222 22 44 chr2 33298703 33298793 -219957790 + MER5A DNA MER1_type 4 91 -98 278 319 7 64 chr2 33298890 33299031 -219957552 - MER5A DNA MER1_type 0 189 57 378 0 0 0 chr2 33299055 33299097 -219957486 + (TG)n Simple_repeat Simple_repeat 1 42 0 26 0 0 0 chr2 33299109 33299135 -219957448 + AT_rich Low_complexity Low_complexity 1 26 0 2221 86 7 0 chr2 33299216 33299508 -219957075 + AluY SINE Alu 1 294 -17 204 295 124 0 chr2 33299635 33299740 -219956843 + L2 LINE L2 3194 3311 -2 * 386 244 178 0 chr2 33299739 33299874 -219956709 - MIR SINE MIR -1 261 103 509 116 53 53 chr2 33299887 33299982 -219956601 + LTR47A LTR ERVL 1 95 -357 286 205 86 43 chr2 33300150 33300267 -219956316 - L1MC4 LINE L1 -5 8037 7916 1432 56 0 0 chr2 33300349 33300527 -219956056 - AluY SINE Alu -7 304 127 22 0 0 0 chr2 33351905 33351927 -219904656 + AT_rich Low_complexity Low_complexity 1 22 0 2018 99 32 7 chr2 33351927 33352209 -219904374 + AluSx SINE Alu 1 289 -23 655 24 0 0 chr2 33352446 33352529 -219904054 + L1P LINE L1 2756 2838 -3308 2339 69 7 3 chr2 33352751 33353057 -219903526 + AluY SINE Alu 1 307 -4 244 313 148 68 chr2 33353057 33353456 -219903127 + L1ME LINE L1 229 659 -5546 1654 127 93 4 chr2 33353715 33353974 -219902609 + AluSx SINE Alu 1 282 -30 294 73 0 0 chr2 33353975 33354016 -219902567 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 323 267 0 11 chr2 33354023 33354113 -219902470 + L1ME LINE L1 2271 2359 -4037 758 292 106 25 chr2 33354174 33354664 -219901919 + L1ME LINE L1 2448 2977 -3238 1583 180 3 7 chr2 33354813 33355096 -219901487 - AluJb SINE Alu -8 304 23 2239 96 0 35 chr2 33355195 33355507 -219901076 - AluY SINE Alu -10 301 1 787 219 91 0 chr2 33355748 33355935 -219900648 - MER3 DNA MER1_type 0 209 6 2110 117 17 0 chr2 33356059 33356357 -219900226 + AluSx SINE Alu 3 305 -7 1524 179 33 7 chr2 33356674 33356948 -219899635 + AluJo SINE Alu 1 281 -31 462 197 0 0 chr2 33356979 33357055 -219899528 + AluJ/FRAM SINE Alu 216 291 -21 2530 117 14 0 chr2 33357319 33357687 -219898896 + THE1C LTR MaLR 1 373 -2 1275 243 34 91 chr2 33358186 33358660 -219897923 + L1M4b LINE L1 21 467 -6392 * 1276 350 67 50 chr2 33358652 33359331 -219897252 + L1MB8 LINE L1 5324 6021 -157 2327 96 3 0 chr2 33359331 33359634 -219896949 - AluSq SINE Alu -9 304 1 1276 350 67 50 chr2 33359634 33359790 -219896793 + L1MB8 LINE L1 6021 6173 -5 21 57 0 0 chr2 33359911 33359946 -219896637 + AT_rich Low_complexity Low_complexity 1 35 0 609 290 41 5 chr2 33360292 33360513 -219896070 + L1M4 LINE L1 4592 4820 -1326 * 2831 157 63 10 chr2 33360512 33361117 -219895466 + L1MC2 LINE L1 5677 6313 -31 21 0 0 0 chr2 33361173 33361194 -219895389 + AT_rich Low_complexity Low_complexity 1 21 0 2176 119 0 0 chr2 33361375 33361669 -219894914 - AluSg SINE Alu -16 294 1 309 188 0 0 chr2 33361669 33361733 -219894850 - L1 LINE L1 -1681 4465 4402 27 29 0 0 chr2 33361735 33361769 -219894814 + AT_rich Low_complexity Low_complexity 1 34 0 1581 195 0 11 chr2 33361769 33362046 -219894537 - AluJo SINE Alu -32 280 7 2865 196 48 3 chr2 33362055 33362674 -219893909 - L1 LINE L1 -1736 4410 3764 25 31 0 0 chr2 33362674 33362706 -219893877 + AT_rich Low_complexity Low_complexity 1 32 0 887 170 0 0 chr2 33362723 33362864 -219893719 - AluSq/x SINE Alu -171 141 1 1995 127 3 3 chr2 33362865 33363179 -219893404 - AluSx SINE Alu 0 314 1 1250 202 60 8 chr2 33363203 33363342 -219893241 - AluJo SINE Alu -37 275 145 243 0 0 0 chr2 33363342 33363369 -219893214 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1250 202 60 8 chr2 33363369 33363481 -219893102 - AluJo SINE Alu -167 145 11 551 44 0 0 chr2 33363586 33363654 -219892929 - L1P LINE L1 -3535 2611 2544 * 7392 32 8 2 chr2 33363653 33365534 -219891049 + L1PA4 LINE L1 4221 6155 0 380 282 84 93 chr2 33365555 33365682 -219890901 - L1M4c LINE L1 -4824 1560 1433 623 199 7 29 chr2 33365682 33365818 -219890765 - FLAM_A SINE Alu 0 133 1 380 282 84 93 chr2 33365818 33366084 -219890499 - L1M4c LINE L1 -4951 1433 1169 2454 90 0 0 chr2 33366084 33366395 -219890188 - AluSx SINE Alu -1 311 1 380 282 84 93 chr2 33366395 33366429 -219890154 - L1M4c LINE L1 -5215 1169 1136 2178 109 0 0 chr2 33366452 33366737 -219889846 - AluSq SINE Alu -12 301 17 284 216 135 0 chr2 33366828 33366902 -219889681 + L1M4 LINE L1 3623 3706 -2440 1139 205 57 4 chr2 33366906 33367135 -219889448 - MLT1D LTR MaLR 0 505 265 327 194 0 0 chr2 33367145 33367207 -219889376 - MLT1-int LTR MaLR -649 722 661 2187 213 25 101 chr2 33367260 33367970 -219888613 - MLT1-int LTR MaLR -711 660 5 1730 218 47 20 chr2 33368190 33368640 -219887943 + MLT1C LTR MaLR 1 462 -5 423 0 0 0 chr2 33368673 33368720 -219887863 + (CA)n Simple_repeat Simple_repeat 1 47 0 291 283 0 12 chr2 33369708 33369829 -219886754 + MER5A DNA MER1_type 13 189 0 258 219 114 32 chr2 33370214 33370337 -219886246 + L1ME LINE L1 5712 5844 -277 1960 138 3 0 chr2 33370346 33370635 -219885948 + AluSx SINE Alu 1 290 -22 266 279 83 21 chr2 33371300 33371540 -219885043 + L1M4 LINE L1 3165 3419 -2727 408 318 51 33 chr2 33372095 33372369 -219884214 - L1ME3 LINE L1 -203 5959 5681 765 214 126 82 chr2 33373237 33373579 -219883004 - L1MC4 LINE L1 -142 7900 7544 2069 248 86 8 chr2 33373584 33374233 -219882350 + L1MC4 LINE L1 6658 7357 -685 2074 124 24 0 chr2 33374274 33374572 -219882011 - AluSx SINE Alu -7 305 1 201 147 0 0 chr2 33375942 33375976 -219880607 + (T)n Simple_repeat Simple_repeat 1 34 0 23 54 0 0 chr2 33375990 33376027 -219880556 + AT_rich Low_complexity Low_complexity 1 37 0 333 192 0 0 chr2 33376250 33376302 -219880281 - Tigger2 DNA MER2_type -2666 52 1 413 172 21 0 chr2 33376380 33376473 -219880110 - L1MA4A LINE L1 -5 6298 6204 329 283 131 7 chr2 33377670 33377768 -219878815 + L1M4 LINE L1 4131 4216 -1930 2241 117 0 0 chr2 33377768 33378068 -219878515 + AluSq SINE Alu 1 300 -13 329 283 131 7 chr2 33378068 33378252 -219878331 + L1M4 LINE L1 4216 4448 -1698 1240 179 0 0 chr2 33378269 33378464 -219878119 + AluSx SINE Alu 3 197 -115 316 255 132 9 chr2 33378522 33378628 -219877955 + L1M4 LINE L1 4561 4679 -1467 1933 193 99 2 chr2 33378817 33379253 -219877330 - L1MB5 LINE L1 -155 6019 5542 24 32 0 0 chr2 33379524 33379555 -219877028 + AT_rich Low_complexity Low_complexity 1 31 0 314 254 16 0 chr2 33379782 33379845 -219876738 - AluJ/FLAM SINE Alu -222 80 17 2100 118 0 16 chr2 33381485 33381798 -219874785 - AluSx SINE Alu -4 308 1 181 347 40 0 chr2 33381861 33381936 -219874647 - L2 LINE L2 -19 3253 3176 321 305 61 15 chr2 33382118 33382249 -219874334 - L2 LINE L2 -1004 2310 2174 26 0 0 0 chr2 33382357 33382383 -219874200 + AT_rich Low_complexity Low_complexity 1 26 0 1814 156 11 0 chr2 33382515 33382798 -219873785 + AluSx SINE Alu 1 286 -26 497 96 12 0 chr2 33383289 33383372 -219873211 + FLAM_A SINE Alu 59 142 0 2049 117 9 32 chr2 33383446 33383762 -219872821 - AluSx SINE Alu -3 309 1 246 326 61 11 chr2 33383806 33383987 -219872596 - L1MEc LINE L1 -4907 1477 1288 817 212 53 12 chr2 33384183 33384428 -219872155 - L1MEc LINE L1 -5511 1052 798 231 195 110 37 chr2 33384480 33384562 -219872021 + Charlie5 DNA MER1_type 35 122 -2490 685 286 125 21 chr2 33384705 33385128 -219871455 - L1MEc LINE L1 -5873 690 224 25 75 0 0 chr2 33385179 33385232 -219871351 + AT_rich Low_complexity Low_complexity 1 53 0 1623 199 34 0 chr2 33385754 33386045 -219870538 + AluJb SINE Alu 1 301 -11 207 328 216 29 chr2 33386405 33386576 -219870007 + MIR SINE MIR 41 243 -19 22 35 0 0 chr2 33387135 33387164 -219869419 + AT_rich Low_complexity Low_complexity 1 29 0 15472 129 48 17 chr2 33388052 33390203 -219866380 + Tigger4(Zombi) DNA MER2_type 1 2251 -480 2305 102 0 0 chr2 33390203 33390506 -219866077 - AluSq SINE Alu -10 303 1 15472 129 48 17 chr2 33390506 33391002 -219865581 + Tigger4(Zombi) DNA MER2_type 2251 2730 -1 805 68 10 0 chr2 33391485 33391588 -219864995 - AluSg/x SINE Alu -8 302 199 2174 110 0 3 chr2 33391619 33391910 -219864673 + AluSq SINE Alu 1 290 -23 21 36 0 0 chr2 33392279 33392307 -219864276 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 33393637 33393658 -219862925 + AT_rich Low_complexity Low_complexity 1 21 0 237 238 0 0 chr2 33394300 33394363 -219862220 + (TAAA)n Simple_repeat Simple_repeat 4 66 0 1922 154 3 0 chr2 33394410 33394702 -219861881 - AluSx SINE Alu -19 293 1 575 226 39 0 chr2 33394863 33395018 -219861565 - L1MC4 LINE L1 -372 7670 7510 477 186 0 0 chr2 33395844 33395930 -219860653 + AluSg/x SINE Alu 206 291 -19 273 224 0 0 chr2 33395973 33396040 -219860543 + (TTTA)n Simple_repeat Simple_repeat 4 70 0 1438 94 5 33 chr2 33396157 33396370 -219860213 - AluSq SINE Alu -95 218 12 656 188 45 0 chr2 33397926 33398038 -219858545 + FLAM_C SINE Alu 9 125 -18 2005 98 41 3 chr2 33398046 33398341 -219858242 + AluSg SINE Alu 1 306 -4 1253 127 229 0 chr2 33398376 33398621 -219857962 + AluJb SINE Alu 1 301 -11 1942 128 37 3 chr2 33399354 33399650 -219856933 + AluSx SINE Alu 1 306 -6 4097 211 52 27 chr2 33400906 33402070 -219854513 - L1 LINE L1 -2434 3712 2519 299 300 144 11 chr2 33402142 33402322 -219854261 - L1ME LINE L1 -456 5665 5462 252 314 23 12 chr2 33402618 33402704 -219853879 + L2 LINE L2 120 206 -3108 306 284 95 76 chr2 33402742 33402918 -219853665 + L2 LINE L2 3096 3278 -35 1951 138 17 0 chr2 33402918 33403215 -219853368 - AluSx SINE Alu -10 302 1 306 284 95 76 chr2 33403215 33403249 -219853334 + L2 LINE L2 3278 3310 -3 1949 145 108 44 chr2 33403806 33403874 -219852709 - Tigger2a DNA MER2_type -2275 433 371 1348 148 183 15 chr2 33403874 33404137 -219852446 - AluJb SINE Alu -5 307 1 1949 145 108 44 chr2 33404137 33404475 -219852108 - Tigger2a DNA MER2_type -2337 371 1 2132 121 3 0 chr2 33404478 33404767 -219851816 - AluSp SINE Alu -23 290 1 2490 63 0 3 chr2 33405202 33405505 -219851078 + AluY SINE Alu 1 302 -9 349 283 72 20 chr2 33405685 33405837 -219850746 - L1ME4a LINE L1 -234 5887 5728 366 138 0 0 chr2 33406475 33406540 -219850043 - L1PB3 LINE L1 -4 6150 6086 1750 159 3 14 chr2 33408233 33408523 -219848060 + AluSx SINE Alu 1 287 -25 288 0 0 0 chr2 33408523 33408555 -219848028 + (CATA)n Simple_repeat Simple_repeat 2 33 0 358 131 50 0 chr2 33408699 33408798 -219847785 + (TA)n Simple_repeat Simple_repeat 2 105 0 1527 179 3 34 chr2 33409155 33409446 -219847137 + AluJo SINE Alu 31 312 0 2287 83 3 13 chr2 33409675 33409977 -219846606 - AluSx SINE Alu -13 299 1 282 335 64 65 chr2 33410055 33410337 -219846246 - L2 LINE L2 -256 3016 2730 23 0 0 0 chr2 33411042 33411065 -219845518 + AT_rich Low_complexity Low_complexity 1 23 0 283 172 57 98 chr2 33411214 33411336 -219845247 + MER113 DNA MER1_type? 80 196 -325 320 280 69 40 chr2 33411387 33411562 -219845021 + L1MC/D LINE L1 5641 5820 -1988 2139 115 13 0 chr2 33411574 33411878 -219844705 - AluSx SINE Alu -4 308 1 679 134 0 59 chr2 33411946 33412065 -219844518 + AluJb SINE Alu 1 112 -200 1857 127 36 7 chr2 33412201 33412505 -219844078 + AluSx SINE Alu 1 312 0 1953 138 3 7 chr2 33413454 33413751 -219842832 - AluSx SINE Alu -16 296 1 766 161 0 8 chr2 33413810 33413928 -219842655 + FLAM_C SINE Alu 1 117 -26 35 0 0 0 chr2 33413932 33413967 -219842616 + AT_rich Low_complexity Low_complexity 1 35 0 2002 143 0 10 chr2 33413967 33414274 -219842309 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr2 33414343 33414366 -219842217 + AT_rich Low_complexity Low_complexity 1 23 0 2292 112 0 0 chr2 33415096 33415399 -219841184 - AluSx SINE Alu -9 303 1 25 51 0 0 chr2 33415966 33416005 -219840578 + AT_rich Low_complexity Low_complexity 1 39 0 1703 166 48 0 chr2 33416143 33416438 -219840145 - AluJb SINE Alu -3 309 1 259 389 22 14 chr2 33416552 33416691 -219839892 - MIR3 SINE MIR -35 173 34 2164 124 0 0 chr2 33416826 33417116 -219839467 + AluSg SINE Alu 1 290 -20 1919 151 41 0 chr2 33417175 33417466 -219839117 + AluSg SINE Alu 1 303 -7 2125 99 24 7 chr2 33417797 33418089 -219838494 + AluSq SINE Alu 1 297 -16 2293 103 3 0 chr2 33422312 33422614 -219833969 - AluSp SINE Alu -10 303 1 1553 202 0 18 chr2 33424134 33424416 -219832167 + AluJb SINE Alu 6 282 -30 360 64 0 0 chr2 33424418 33424465 -219832118 + (TGGA)n Simple_repeat Simple_repeat 3 49 0 26 82 0 0 chr2 33424689 33424750 -219831833 + AT_rich Low_complexity Low_complexity 1 61 0 34 24 0 0 chr2 33425711 33425752 -219830831 + AT_rich Low_complexity Low_complexity 1 41 0 2154 90 45 0 chr2 33425921 33426209 -219830374 + AluSg SINE Alu 1 301 -9 341 171 341 0 chr2 33426253 33426341 -219830242 - MLT1F1 LTR MaLR -384 183 66 311 312 86 9 chr2 33426837 33427058 -219829525 - L1ME4a LINE L1 -255 5866 5629 482 165 25 0 chr2 33427858 33427937 -219828646 - AluJb SINE Alu -19 293 213 2145 119 3 0 chr2 33428473 33428766 -219827817 + AluSx SINE Alu 14 307 -5 2058 152 7 0 chr2 33428766 33429063 -219827520 + AluSx SINE Alu 1 299 -13 1926 140 7 0 chr2 33429077 33429363 -219827220 + AluSx SINE Alu 1 288 -24 1324 119 59 9 chr2 33430613 33430832 -219825751 + MER30 DNA MER1_type 1 230 0 2370 78 3 0 chr2 33431020 33431314 -219825269 + AluSp SINE Alu 2 296 -17 28 0 0 0 chr2 33431340 33431368 -219825215 + AT_rich Low_complexity Low_complexity 1 28 0 529 202 20 105 chr2 33431583 33431767 -219824816 + Charlie1 DNA MER1_type 2365 2524 -237 3647 137 45 9 chr2 33431767 33432440 -219824143 + L1MA5 LINE L1 5600 6296 -4 529 202 20 105 chr2 33432440 33432502 -219824081 + Charlie1 DNA MER1_type 2524 2590 -171 1752 126 3 35 chr2 33433183 33433468 -219823115 + AluSx SINE Alu 32 307 -5 24 0 0 0 chr2 33433557 33433581 -219823002 + AT_rich Low_complexity Low_complexity 1 24 0 185 62 0 31 chr2 33433586 33433618 -219822965 + (TA)n Simple_repeat Simple_repeat 1 31 0 209 293 37 0 chr2 33433829 33433911 -219822672 - MIR SINE MIR -54 208 124 781 142 4 147 chr2 33434442 33434599 -219821984 - L1PA15 LINE L1 0 6165 6048 1950 165 30 0 chr2 33434599 33434902 -219821681 - AluSx SINE Alu 0 312 1 781 142 4 147 chr2 33434902 33434969 -219821614 - L1PA15 LINE L1 -117 6048 5973 1989 132 20 7 chr2 33435301 33435605 -219820978 + AluSx SINE Alu 1 308 -4 2017 148 0 16 chr2 33436025 33436329 -219820254 + AluSx SINE Alu 1 299 -13 2244 106 0 10 chr2 33436443 33436746 -219819837 + AluSq SINE Alu 1 300 -13 1859 128 43 33 chr2 33437415 33437720 -219818863 + AluSx SINE Alu 1 308 -4 1110 173 71 5 chr2 33437819 33438016 -219818567 + AluJo SINE Alu 87 296 -16 262 94 0 38 chr2 33438093 33438146 -219818437 + (TTTCC)n Simple_repeat Simple_repeat 5 55 0 2139 87 4 7 chr2 33438159 33438435 -219818148 - AluSq SINE Alu -38 275 1 1872 154 0 13 chr2 33438597 33438903 -219817680 - AluSx SINE Alu -10 302 1 243 0 0 0 chr2 33439005 33439032 -219817551 + (TG)n Simple_repeat Simple_repeat 2 28 0 453 125 0 0 chr2 33439415 33439487 -219817096 + AluS SINE Alu 227 298 -12 1488 130 173 4 chr2 33440490 33440744 -219815839 - AluSg1 SINE Alu -12 297 1 993 79 0 0 chr2 33440828 33440954 -219815629 - AluY SINE Alu -15 296 171 50 65 0 0 chr2 33440989 33441081 -219815502 + AT_rich Low_complexity Low_complexity 1 92 0 1410 204 47 23 chr2 33441588 33441887 -219814696 - AluJo SINE Alu -6 306 1 785 213 91 15 chr2 33442261 33442524 -219814059 + L1MC5 LINE L1 7631 7913 -48 184 324 154 0 chr2 33442723 33442905 -219813678 + L2 LINE L2 2846 3055 -217 252 0 0 0 chr2 33442906 33442934 -219813649 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 703 165 0 0 chr2 33442962 33443071 -219813512 - AluSq SINE Alu -71 242 134 1521 128 0 77 chr2 33443072 33443372 -219813211 - AluSx SINE Alu 0 312 48 2077 135 0 13 chr2 33444265 33444568 -219812015 + AluSq SINE Alu 1 299 -14 1669 170 159 5 chr2 33444614 33444985 -219811598 - MSTA LTR MaLR 0 428 1 232 314 0 92 chr2 33445153 33445306 -219811277 + L2 LINE L2 3164 3302 -11 2108 96 0 7 chr2 33445342 33445652 -219810931 - AluSc SINE Alu 0 308 1 1922 150 0 10 chr2 33446011 33446305 -219810278 + AluSx SINE Alu 17 307 -5 1610 174 45 3 chr2 33446542 33446829 -219809754 + AluJb SINE Alu 1 299 -13 2203 90 7 3 chr2 33446841 33447130 -219809453 + AluSg SINE Alu 1 290 -20 344 245 29 20 chr2 33447251 33447353 -219809230 + L2 LINE L2 3208 3310 -3 25 0 0 0 chr2 33447934 33447959 -219808624 + AT_rich Low_complexity Low_complexity 1 25 0 1413 110 5 0 chr2 33448774 33448965 -219807618 + AluSq SINE Alu 1 192 -121 214 296 185 71 chr2 33449858 33450166 -219806417 - L2 LINE L2 -441 2873 2531 1902 155 7 0 chr2 33450458 33450748 -219805835 + AluJb SINE Alu 1 292 -20 329 199 171 55 chr2 33450760 33450906 -219805677 - L1ME LINE L1 -350 5771 5609 2401 76 0 0 chr2 33451258 33451549 -219805034 + AluSc SINE Alu 1 291 -18 250 346 65 19 chr2 33452952 33453059 -219803524 - L2 LINE L2 -24 3248 3137 2282 101 13 0 chr2 33453496 33453803 -219802780 - AluY SINE Alu 0 311 1 1104 110 0 30 chr2 33453877 33454041 -219802542 - AluSg/x SINE Alu -18 292 134 1940 116 22 0 chr2 33454041 33454311 -219802272 - AluSx SINE Alu -38 274 1 1580 211 73 45 chr2 33454480 33454945 -219801638 + L1ME1 LINE L1 5683 6160 -6 700 227 57 31 chr2 33455580 33455774 -219800809 + HAL1 LINE L1 574 772 -1735 2338 74 0 19 chr2 33456140 33456451 -219800132 - AluY SINE Alu -6 305 1 396 103 0 0 chr2 33456792 33456850 -219799733 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1981 98 4 0 chr2 33456854 33457119 -219799464 - AluSx SINE Alu -46 266 1 395 245 16 125 chr2 33458319 33458453 -219798130 - MIR SINE MIR -34 228 119 2193 75 7 0 chr2 33458453 33458777 -219797806 - AluSx SINE Alu 0 328 3 395 245 16 125 chr2 33458777 33458833 -219797750 - MIR SINE MIR -143 119 58 2008 107 7 10 chr2 33458848 33459139 -219797444 - AluSq SINE Alu -23 290 1 2564 46 0 16 chr2 33459152 33459458 -219797125 - AluY SINE Alu -10 301 1 201 189 0 38 chr2 33459584 33459637 -219796946 + (TG)n Simple_repeat Simple_repeat 1 51 0 234 347 129 27 chr2 33459676 33459929 -219796654 - L2 LINE L2 -254 3059 2778 2227 112 3 0 chr2 33460741 33461046 -219795537 + AluSx SINE Alu 1 306 -6 24 32 0 0 chr2 33461493 33461524 -219795059 + AT_rich Low_complexity Low_complexity 1 31 0 2109 109 16 10 chr2 33461526 33461830 -219794753 - AluSx SINE Alu -6 306 1 829 123 14 41 chr2 33461882 33462028 -219794555 - FLAM_C SINE Alu -1 142 1 235 61 41 82 chr2 33462590 33462639 -219793944 + MER58 DNA MER1_type 68 114 -2306 255 114 209 0 chr2 33462640 33462694 -219793889 + MER58 DNA MER1_type 2357 2420 0 976 230 25 0 chr2 33462922 33463126 -219793457 + MER3 DNA MER1_type 1 209 0 1701 168 34 17 chr2 33463132 33463423 -219793160 - AluJo SINE Alu -16 296 1 24 32 0 0 chr2 33463750 33463781 -219792802 + AT_rich Low_complexity Low_complexity 1 31 0 1655 171 25 4 chr2 33464020 33464294 -219792289 - AluJb SINE Alu -18 294 15 2123 124 0 0 chr2 33464386 33464676 -219791907 - AluSx SINE Alu -22 290 1 2434 86 3 0 chr2 33465124 33465426 -219791157 + AluSg SINE Alu 1 303 -7 2368 87 3 0 chr2 33465933 33466232 -219790351 - AluSx SINE Alu -12 300 1 272 310 133 26 chr2 33466280 33466393 -219790190 - MIR SINE MIR -68 140 16 191 376 96 13 chr2 33466514 33466671 -219789912 - L2 LINE L2 -218 3054 2885 2261 109 0 3 chr2 33467039 33467350 -219789233 - AluSg SINE Alu 0 310 1 271 271 37 65 chr2 33467499 33467606 -219788977 + L2 LINE L2 2262 2365 -949 205 224 53 66 chr2 33467841 33467917 -219788666 + MIR3 SINE MIR 93 167 -41 2292 98 10 0 chr2 33468090 33468397 -219788186 - AluSx SINE Alu -2 310 1 279 306 52 91 chr2 33468452 33468560 -219788023 - MIR SINE MIR -3 259 148 2438 72 0 0 chr2 33468560 33468851 -219787732 - AluY SINE Alu -20 291 1 279 306 52 91 chr2 33468851 33468994 -219787589 - MIR SINE MIR -114 148 18 1964 135 20 7 chr2 33469442 33469746 -219786837 + AluSx SINE Alu 2 309 -3 2192 103 3 0 chr2 33470420 33470747 -219785836 + AluSx SINE Alu 1 328 0 1125 252 37 7 chr2 33471010 33471280 -219785303 - MER58 DNA MER1_type -63 278 1 1336 101 0 0 chr2 33471397 33471565 -219785018 - AluSp SINE Alu -12 301 134 2134 129 0 3 chr2 33471565 33471876 -219784707 - AluSx SINE Alu -2 310 1 2170 134 0 3 chr2 33471967 33472272 -219784311 - AluSx SINE Alu -8 304 1 185 0 40 0 chr2 33472368 33472393 -219784190 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1843 160 0 3 chr2 33472395 33472688 -219783895 - AluJb SINE Alu -20 292 1 1172 136 0 0 chr2 33472696 33472858 -219783725 - AluSg/x SINE Alu -19 291 130 2113 119 3 7 chr2 33473017 33473326 -219783257 - AluSx SINE Alu 0 308 1 2018 110 3 49 chr2 33473474 33473619 -219782964 + AluSx SINE Alu 3 128 -184 2222 125 0 3 chr2 33473619 33473922 -219782661 + AluSx SINE Alu 3 304 -8 2018 110 3 49 chr2 33473922 33474084 -219782499 + AluSx SINE Alu 128 296 -16 849 151 0 43 chr2 33474308 33474447 -219782136 - FLAM_A SINE Alu 0 133 1 306 206 0 0 chr2 33474517 33474585 -219781998 + CT-rich Low_complexity Low_complexity 1 68 0 695 202 0 0 chr2 33474585 33474709 -219781874 - FLAM_A SINE Alu -1 141 18 281 256 93 0 chr2 33474976 33475062 -219781521 + MIR SINE MIR 56 149 -113 1328 46 0 0 chr2 33475276 33475427 -219781156 - L1PA4 LINE L1 -8 6147 5997 2279 103 3 10 chr2 33475428 33475738 -219780845 - AluSx SINE Alu -4 308 1 2272 92 0 0 chr2 33475755 33476047 -219780536 - AluY SINE Alu -19 292 1 760 194 23 8 chr2 33476055 33476184 -219780399 - AluJo SINE Alu -176 136 6 2267 95 0 13 chr2 33476277 33476582 -219780001 - AluY SINE Alu -10 301 1 1062 195 180 45 chr2 33476693 33476960 -219779623 - AluSq SINE Alu 0 303 1 978 212 12 0 chr2 33477411 33477576 -219779007 + FAM SINE Alu 1 167 -8 2222 102 0 7 chr2 33477854 33478148 -219778435 - AluSq SINE Alu -20 293 2 664 230 7 22 chr2 33478160 33478295 -219778288 - FLAM_A SINE Alu 0 133 1 2059 133 3 7 chr2 33478450 33478759 -219777824 + AluJb SINE Alu 3 310 -2 2296 101 0 3 chr2 33479265 33479563 -219777020 - AluSg SINE Alu -13 297 1 204 40 0 0 chr2 33480069 33480094 -219776489 + (T)n Simple_repeat Simple_repeat 1 25 0 201 328 0 17 chr2 33480814 33480872 -219775711 - MIR SINE MIR -186 76 20 2185 88 11 0 chr2 33481079 33481363 -219775220 - AluSp SINE Alu -25 288 2 334 239 11 23 chr2 33481712 33481800 -219774783 + MER2 DNA MER2_type 2 88 -257 2201 101 3 0 chr2 33481811 33482097 -219774486 + AluSg SINE Alu 1 287 -23 186 71 0 0 chr2 33482106 33482134 -219774449 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2266 114 3 0 chr2 33483039 33483337 -219773246 + AluSx SINE Alu 8 306 -6 22 0 0 0 chr2 33483588 33483610 -219772973 + AT_rich Low_complexity Low_complexity 1 22 0 227 234 182 13 chr2 33483797 33483874 -219772709 - MIR3 SINE MIR -28 180 91 209 293 61 20 chr2 33483974 33484073 -219772510 - MIR SINE MIR -1 261 159 383 200 50 32 chr2 33484115 33484261 -219772322 - L1MA10 LINE L1 -6 6306 6166 1506 156 6 86 chr2 33484261 33484417 -219772166 - AluJo SINE Alu -23 289 122 2209 121 0 0 chr2 33484417 33484715 -219771868 - AluSx SINE Alu -14 298 1 1907 150 3 14 chr2 33484715 33485009 -219771574 - AluSg SINE Alu -19 291 1 1506 156 6 86 chr2 33485009 33485165 -219771418 - AluJo SINE Alu -188 124 1 282 116 0 0 chr2 33485452 33485495 -219771088 - Alu SINE Alu -4 304 262 1047 198 19 10 chr2 33485562 33485769 -219770814 - MER3 DNA MER1_type 0 209 1 448 340 180 10 chr2 33485892 33486286 -219770297 - L2 LINE L2 -5 3267 2807 219 353 0 0 chr2 33486368 33486436 -219770147 - L2 LINE L2 -49 3223 3156 1981 102 0 0 chr2 33486702 33486958 -219769625 - AluY SINE Alu -9 302 47 1697 63 5 0 chr2 33487069 33487274 -219769309 - AluY SINE Alu -8 303 98 2067 113 7 7 chr2 33487555 33487847 -219768736 - AluSq SINE Alu -21 292 1 1452 202 54 0 chr2 33487857 33488134 -219768449 - AluJo SINE Alu -20 292 1 1634 201 3 3 chr2 33488686 33488984 -219767599 - AluJo SINE Alu -14 298 1 21 0 0 0 chr2 33489075 33489096 -219767487 + AT_rich Low_complexity Low_complexity 1 21 0 6412 58 26 6 chr2 33489252 33490068 -219766515 - L1PA7 LINE L1 0 6469 5638 2168 27 58 0 chr2 33490061 33490321 -219766262 + L1PA7 LINE L1 5737 6011 -143 * 17569 78 4 4 chr2 33490321 33492684 -219763899 - L1PA7 LINE L1 -822 5639 3278 4780 98 22 0 chr2 33492682 33493349 -219763234 - L1PA7 LINE L1 -5779 682 1 * 438 75 0 0 chr2 33493352 33493419 -219763164 + (TATG)n Simple_repeat Simple_repeat 2 68 0 2153 104 0 0 chr2 33493422 33493702 -219762881 - AluSg SINE Alu -30 280 1 2202 90 0 45 chr2 33494555 33494866 -219761717 - AluSx SINE Alu -15 297 1 2025 113 7 0 chr2 33495335 33495610 -219760973 + AluSc SINE Alu 4 280 -29 216 0 0 0 chr2 33495613 33495637 -219760946 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 330 304 15 44 chr2 33495925 33496060 -219760523 + MIR SINE MIR 34 164 -98 284 262 56 71 chr2 33496130 33496256 -219760327 + MIR SINE MIR 28 151 -111 2396 86 3 0 chr2 33497134 33497435 -219759148 - AluSx SINE Alu -10 302 1 2045 133 0 29 chr2 33497491 33497626 -219758957 + AluSq SINE Alu 1 138 -175 2452 73 10 19 chr2 33497626 33497940 -219758643 + AluY SINE Alu 1 311 0 2045 133 0 29 chr2 33497940 33498120 -219758463 + AluSq SINE Alu 138 307 -6 498 159 0 0 chr2 33498226 33498314 -219758269 + CT-rich Low_complexity Low_complexity 1 88 0 654 150 0 40 chr2 33498315 33498415 -219758168 - FLAM_C SINE Alu -21 122 27 23 0 0 0 chr2 33498494 33498517 -219758066 + AT_rich Low_complexity Low_complexity 1 23 0 2479 77 0 0 chr2 33498517 33498828 -219757755 + AluY SINE Alu 1 311 0 944 128 7 7 chr2 33498870 33499011 -219757572 - AluJb SINE Alu -171 141 1 2279 109 6 3 chr2 33499322 33499633 -219756950 + AluSx SINE Alu 1 312 0 32 26 0 0 chr2 33499646 33499685 -219756898 + AT_rich Low_complexity Low_complexity 1 39 0 1383 111 5 0 chr2 33499707 33499897 -219756686 - AluSx SINE Alu -121 191 1 419 229 150 0 chr2 33499972 33500112 -219756471 - L1ME1 LINE L1 -6 6160 6000 528 130 150 0 chr2 33500121 33500221 -219756362 - L1ME1 LINE L1 -207 5957 5843 312 247 56 11 chr2 33500236 33500325 -219756258 - L1ME1 LINE L1 -601 5758 5666 2346 112 0 3 chr2 33500325 33500638 -219755945 - AluSx SINE Alu 0 312 1 1518 224 36 17 chr2 33500638 33501058 -219755525 - L1ME1 LINE L1 -813 5333 4906 642 138 11 0 chr2 33501066 33501160 -219755423 - FLAM_C SINE Alu -16 127 33 1021 202 99 11 chr2 33501167 33501429 -219755154 - L1ME1 LINE L1 -1233 4913 4629 294 364 39 26 chr2 33501535 33501766 -219754817 + MIR SINE MIR 29 262 0 2118 237 50 42 chr2 33502552 33502945 -219753638 - L1MC4 LINE L1 -157 7885 7497 2241 103 0 7 chr2 33502945 33503246 -219753337 - AluSq SINE Alu -14 299 1 2118 237 50 42 chr2 33503246 33503432 -219753151 - L1MC4 LINE L1 -545 7497 7298 1973 115 40 0 chr2 33503432 33503710 -219752873 + AluSx SINE Alu 1 289 -23 2118 237 50 42 chr2 33503710 33503765 -219752818 - L1MC4 LINE L1 -744 7298 7245 2444 87 0 0 chr2 33503871 33504170 -219752413 - AluSx SINE Alu -13 299 1 2276 90 0 13 chr2 33504381 33504681 -219751902 - AluY SINE Alu -15 296 1 362 320 127 18 chr2 33504760 33504988 -219751595 - MIR SINE MIR -3 259 7 2394 110 0 0 chr2 33505502 33505811 -219750772 - AluSq SINE Alu -4 309 1 22 35 0 0 chr2 33506102 33506131 -219750452 + AT_rich Low_complexity Low_complexity 1 29 0 2123 129 0 6 chr2 33506197 33506508 -219750075 - AluSg1 SINE Alu 0 309 1 21 0 0 0 chr2 33506767 33506788 -219749795 + AT_rich Low_complexity Low_complexity 1 21 0 712 260 82 46 chr2 33506817 33507170 -219749413 - L1ME3A LINE L1 -211 5951 5585 2268 89 0 20 chr2 33507170 33507472 -219749111 - AluSc SINE Alu -13 296 1 712 260 82 46 chr2 33507472 33507564 -219749019 - L1ME3A LINE L1 -577 5585 5498 1790 157 17 7 chr2 33507700 33507999 -219748584 + AluJb SINE Alu 7 308 -4 197 83 28 0 chr2 33508115 33508151 -219748432 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 2406 72 0 0 chr2 33508153 33508446 -219748137 - AluY SINE Alu -18 293 1 290 346 90 25 chr2 33508857 33509212 -219747371 - L2 LINE L2 -1259 2055 1678 1799 134 40 7 chr2 33509430 33509738 -219746845 + AluSx SINE Alu 1 317 0 578 295 142 11 chr2 33510019 33510300 -219746283 - L2 LINE L2 0 3313 2996 181 315 79 11 chr2 33510958 33511047 -219745536 + L3 LINE CR1 587 681 -896 1783 156 65 26 chr2 33511214 33511566 -219745017 + MER47A DNA MER2_type 1 366 0 24 0 0 0 chr2 33511666 33511690 -219744893 + AT_rich Low_complexity Low_complexity 1 24 0 444 82 0 0 chr2 33511690 33511751 -219744832 + (TG)n Simple_repeat Simple_repeat 2 62 0 2186 96 3 48 chr2 33512388 33512567 -219744016 - AluSq SINE Alu -13 300 139 2418 78 0 10 chr2 33512567 33512874 -219743709 - AluY SINE Alu -7 304 1 2186 96 3 48 chr2 33512874 33513008 -219743575 - AluSq SINE Alu -174 139 1 1974 123 0 14 chr2 33513593 33513877 -219742706 + AluSg SINE Alu 1 280 -30 1931 4 0 0 chr2 33513892 33514120 -219742463 - L1PA2 LINE L1 -249 5906 5679 230 51 77 0 chr2 33514107 33514146 -219742437 + L1PA3 LINE L1 6110 6151 -4 * 350 299 56 30 chr2 33514516 33514713 -219741870 + L1MDa LINE L1 1401 1702 -4724 2236 109 3 6 chr2 33514736 33515049 -219741534 - AluSx SINE Alu 0 312 1 2297 206 94 26 chr2 33515231 33516061 -219740522 + L1M4 LINE L1 3763 4648 -1498 429 245 16 78 chr2 33516070 33516090 -219740493 + L1ME1 LINE L1 138 158 -6047 1702 179 21 3 chr2 33516090 33516380 -219740203 - AluSx SINE Alu -17 295 1 429 245 16 78 chr2 33516380 33516551 -219740032 + L1ME1 LINE L1 158 317 -5888 2122 138 3 10 chr2 33516551 33516863 -219739720 - AluSx SINE Alu -2 310 1 1715 267 50 9 chr2 33516919 33517776 -219738807 + L1ME1 LINE L1 1967 2827 -3388 334 266 47 16 chr2 33517855 33517983 -219738600 + L1ME1 LINE L1 2857 2988 -3227 2458 202 132 11 chr2 33518060 33518996 -219737587 + L1ME1 LINE L1 5126 6169 -66 302 45 23 0 chr2 33519701 33519745 -219736838 + L1MC4 LINE L1 7935 7979 -63 529 191 118 33 chr2 33519745 33519897 -219736686 + MER6B DNA MER2_type 1 165 -45 207 340 48 48 chr2 33520217 33520320 -219736263 - L2 LINE L2 -189 3083 2981 2270 92 17 0 chr2 33521025 33521318 -219735265 - AluSx SINE Alu -14 298 1 31 26 0 0 chr2 33521409 33521447 -219735136 + AT_rich Low_complexity Low_complexity 1 38 0 892 129 8 0 chr2 33521768 33521900 -219734683 - FLAM_C SINE Alu 0 133 1 1392 129 52 8 chr2 33522056 33522304 -219734279 + L1MB2 LINE L1 5906 6164 -7 567 241 51 110 chr2 33522309 33522413 -219734170 + L1M4 LINE L1 4364 4473 -1673 2164 125 0 14 chr2 33522413 33522710 -219733873 + AluSx SINE Alu 5 297 -15 567 241 51 110 chr2 33522710 33522979 -219733604 + L1M4 LINE L1 4473 4715 -1431 893 217 0 6 chr2 33523019 33523194 -219733389 + MER5A DNA MER1_type 1 174 -15 575 248 96 23 chr2 33523197 33523499 -219733084 + L1M4 LINE L1 4753 5076 -1070 256 180 0 66 chr2 33523593 33523654 -219732929 + MIR SINE MIR 201 257 -5 802 153 15 22 chr2 33524142 33524279 -219732304 + AluJb SINE Alu 1 136 -176 1740 182 0 19 chr2 33524390 33524698 -219731885 - AluJo SINE Alu -10 302 1 1585 132 30 0 chr2 33524755 33525020 -219731563 - L1MB3 LINE L1 -19 6164 5892 2110 122 0 34 chr2 33525021 33525158 -219731425 + AluSq SINE Alu 1 141 -172 2441 97 0 0 chr2 33525158 33525468 -219731115 + AluSg SINE Alu 1 310 0 2110 122 0 34 chr2 33525468 33525650 -219730933 + AluSq SINE Alu 141 309 -4 1370 106 0 6 chr2 33525679 33525859 -219730724 + AluSg/x SINE Alu 120 298 -14 1049 190 93 28 chr2 33525862 33525980 -219730603 - L1MB3 LINE L1 -280 5903 5794 2046 119 0 20 chr2 33525980 33526313 -219730270 - AluSx SINE Alu 0 312 1 1049 190 93 28 chr2 33526313 33526483 -219730100 - L1MB3 LINE L1 -389 5794 5596 1902 148 27 3 chr2 33526640 33526937 -219729646 + AluJb SINE Alu 5 308 -4 199 343 56 19 chr2 33527358 33527466 -219729117 - MIR SINE MIR -112 150 39 1682 154 11 4 chr2 33527477 33527737 -219728846 - AluSx SINE Alu -16 296 35 1604 179 25 18 chr2 33527864 33528149 -219728434 - AluJo SINE Alu -25 287 1 207 0 0 0 chr2 33528155 33528178 -219728405 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2540 40 0 3 chr2 33528202 33528499 -219728084 - AluY SINE Alu -15 296 1 288 304 54 0 chr2 33528958 33529050 -219727533 - L2 LINE L2 -246 3067 2971 397 175 109 36 chr2 33529919 33530054 -219726529 - MIR SINE MIR -54 208 60 2112 116 7 7 chr2 33530266 33530559 -219726024 - AluSq SINE Alu -20 293 1 381 294 0 20 chr2 33530813 33530915 -219725668 + L2 LINE L2 3190 3289 -24 361 252 57 16 chr2 33531155 33531278 -219725305 + MIR3 SINE MIR 33 160 -48 297 242 0 0 chr2 33531299 33531361 -219725222 - Charlie8 DNA MER1_type -1001 1416 1355 286 222 0 32 chr2 33531463 33531526 -219725057 - MER5B DNA MER1_type -1 177 117 1391 154 0 26 chr2 33531526 33531760 -219724823 + AluJo SINE Alu 85 312 0 188 194 0 0 chr2 33531822 33531853 -219724730 - MER5B DNA MER1_type -131 47 17 497 284 52 0 chr2 33532762 33532896 -219723687 + MIR SINE MIR 17 157 -105 2227 84 7 0 chr2 33532906 33533190 -219723393 + AluSq SINE Alu 1 286 -27 1426 232 33 25 chr2 33533527 33533889 -219722694 - MLT1A1 LTR MaLR 0 365 1 2099 141 0 3 chr2 33533903 33534207 -219722376 - AluSx SINE Alu -9 303 1 365 197 0 0 chr2 33534216 33534292 -219722291 - L1MC4 LINE L1 0 8042 7967 1453 223 49 25 chr2 33534295 33534716 -219721867 - L1MC4 LINE L1 -166 7657 7198 2030 175 75 10 chr2 33534716 33535116 -219721467 + MSTB LTR MaLR 1 426 0 1453 223 49 25 chr2 33535116 33535180 -219721403 - L1MC4 LINE L1 -625 7198 7137 22 0 0 0 chr2 33535193 33535215 -219721368 + AT_rich Low_complexity Low_complexity 1 22 0 1378 197 14 24 chr2 33535274 33535563 -219721020 - AluJo SINE Alu -16 296 11 656 204 27 18 chr2 33535567 33535788 -219720795 - L1MC4 LINE L1 -820 7222 7000 2331 112 7 0 chr2 33535797 33536102 -219720481 - AluSx SINE Alu -5 307 1 547 239 128 83 chr2 33536235 33536290 -219720293 + MLT1J LTR MaLR 3 54 -457 2280 89 7 3 chr2 33536290 33536582 -219720001 - AluSx SINE Alu -19 293 1 547 239 128 83 chr2 33536582 33536815 -219719768 + MLT1J LTR MaLR 54 304 -207 1570 182 156 12 chr2 33536865 33537211 -219719372 - MSTD LTR MaLR 0 396 1 1558 163 19 49 chr2 33537457 33537782 -219718801 + L1MD3 LINE L1 6663 6977 -1018 2184 134 21 100 chr2 33537785 33538024 -219718559 + Tigger2a DNA MER2_type 1 257 -2451 2253 116 7 7 chr2 33538024 33538327 -219718256 - AluSg SINE Alu -7 303 1 2184 134 21 100 chr2 33538327 33538375 -219718208 + Tigger2a DNA MER2_type 257 307 -2401 1052 98 144 17 chr2 33538375 33538398 -219718185 - MER107 DNA MER1_type -1 196 177 217 0 61 0 chr2 33538398 33538431 -219718152 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1052 98 144 17 chr2 33538431 33538581 -219718002 - MER107 DNA MER1_type -20 177 1 2184 134 21 100 chr2 33538581 33538763 -219717820 + Tigger2a DNA MER2_type 307 434 0 582 137 0 98 chr2 33538763 33538916 -219717667 + L1MC3 LINE L1 6964 7101 -684 341 211 66 0 chr2 33538922 33538998 -219717585 + MLT1F1 LTR MaLR 45 125 -442 426 216 10 0 chr2 33538998 33539095 -219717488 + L1MD3 LINE L1 7404 7501 -494 961 94 0 7 chr2 33539095 33539233 -219717350 - Tigger4(Zombi) DNA MER2_type 0 2731 2595 1157 177 26 17 chr2 33539727 33539959 -219716624 - AluSg/x SINE Alu -6 306 73 2241 113 3 3 chr2 33540147 33540448 -219716135 - AluSx SINE Alu -11 301 1 2215 127 0 10 chr2 33540551 33540865 -219715718 + AluSx SINE Alu 1 311 -1 2295 104 3 0 chr2 33541377 33541674 -219714909 + AluSx SINE Alu 1 298 -14 223 318 48 40 chr2 33541689 33541815 -219714768 - MIR3 SINE MIR -25 183 57 1608 182 43 10 chr2 33542264 33542566 -219714017 - AluJb SINE Alu 0 312 1 1397 184 131 28 chr2 33542619 33542978 -219713605 + MSTD LTR MaLR 1 396 0 5607 115 25 3 chr2 33543482 33543883 -219712700 - L1PA15 LINE L1 -2 6163 5772 2372 85 0 0 chr2 33543883 33544177 -219712406 - AluY SINE Alu -17 294 1 5607 115 25 3 chr2 33544177 33545238 -219711345 - L1PA15 LINE L1 -393 5772 4708 305 338 58 47 chr2 33545808 33546086 -219710497 - L1ME4a LINE L1 -137 5984 5704 228 258 26 58 chr2 33546173 33546328 -219710255 - HAL1 LINE L1 -133 2374 2225 1756 200 0 7 chr2 33546413 33546713 -219709870 - AluJo SINE Alu -14 298 1 1403 178 120 11 chr2 33546717 33546993 -219709590 - AluSx SINE Alu -6 306 1 322 251 60 42 chr2 33547347 33547562 -219709021 - HAL1 LINE L1 -877 1630 1412 669 226 154 24 chr2 33547577 33547785 -219708798 + MIR SINE MIR 22 256 -6 492 299 56 34 chr2 33548110 33548378 -219708205 - HAL1 LINE L1 -1409 1098 825 284 212 59 12 chr2 33549819 33549904 -219706679 - L1 LINE L1 -1246 4900 4812 183 261 261 72 chr2 33549957 33550068 -219706515 + L2 LINE L2 3182 3313 0 509 271 43 7 chr2 33550980 33551158 -219705425 - MLT1K LTR MaLR -5 610 419 1412 203 64 37 chr2 33551340 33551636 -219704947 - AluJo SINE Alu -7 305 2 401 281 129 22 chr2 33551636 33551767 -219704816 + MIR SINE MIR 114 262 0 196 276 52 0 chr2 33551763 33551821 -219704762 - MIR SINE MIR -108 154 94 * 544 252 116 13 chr2 33552193 33552348 -219704235 - MIR SINE MIR -89 173 3 649 163 15 0 chr2 33553409 33553544 -219703039 + CT-rich Low_complexity Low_complexity 3 139 0 761 188 12 59 chr2 33553545 33553715 -219702868 - AluJo SINE Alu -38 274 113 1885 213 98 48 chr2 33553947 33554529 -219702054 + Charlie1a DNA MER1_type 1 611 -844 2190 121 48 25 chr2 33554529 33554885 -219701698 - THE1B LTR MaLR 0 364 1 10322 83 3 5 chr2 33554885 33556467 -219700116 - THE1B-int LTR MaLR 0 1580 1 2274 106 48 31 chr2 33556467 33556825 -219699758 - THE1B LTR MaLR 0 364 1 2988 161 76 70 chr2 33556825 33557456 -219699127 + Charlie1a DNA MER1_type 607 1246 -1515 180 0 0 0 chr2 33557456 33557476 -219699107 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2988 161 76 70 chr2 33557476 33557687 -219698896 + Charlie1a DNA MER1_type 1246 1454 -1 2449 56 7 3 chr2 33557757 33558060 -219698523 - AluY SINE Alu -7 304 1 201 280 13 40 chr2 33558406 33558481 -219698102 + MIR SINE MIR 79 151 -57 219 69 0 0 chr2 33558716 33558745 -219697838 + (CA)n Simple_repeat Simple_repeat 2 30 0 2348 98 7 0 chr2 33560334 33560641 -219695942 - AluSx SINE Alu -3 309 1 2048 116 48 0 chr2 33560804 33561098 -219695485 - AluSg SINE Alu -2 308 1 1532 167 4 15 chr2 33561100 33561369 -219695214 - AluJb SINE Alu -17 295 30 25 31 0 0 chr2 33562331 33562363 -219694220 + AT_rich Low_complexity Low_complexity 1 32 0 358 200 200 0 chr2 33562424 33562529 -219694054 - L1MC4 LINE L1 -157 7885 7760 21 0 0 0 chr2 33563834 33563855 -219692728 + AT_rich Low_complexity Low_complexity 1 21 0 904 214 0 12 chr2 33563919 33564092 -219692491 - FAM SINE Alu -4 171 1 23 33 0 0 chr2 33564096 33564126 -219692457 + AT_rich Low_complexity Low_complexity 1 30 0 228 372 122 6 chr2 33564349 33564513 -219692070 - MIR3 SINE MIR -14 194 12 333 294 140 14 chr2 33564541 33564684 -219691899 - MIR SINE MIR 0 262 102 328 256 139 54 chr2 33565368 33565497 -219691086 + MIR3 SINE MIR 57 196 -12 21 0 0 0 chr2 33565828 33565849 -219690734 + AT_rich Low_complexity Low_complexity 1 21 0 1715 182 3 46 chr2 33567440 33567742 -219688841 + AluJb SINE Alu 1 289 -23 267 285 122 32 chr2 33567747 33567870 -219688713 - MIR3 SINE MIR -5 203 70 592 280 98 14 chr2 33567886 33568100 -219688483 + MIR SINE MIR 3 234 -28 2010 236 26 21 chr2 33568133 33568702 -219687881 + HsTC2 DNA Tc2 13 584 -1314 266 197 158 0 chr2 33568711 33568787 -219687796 + HsTC2 DNA Tc2 1811 1898 0 24 32 0 0 chr2 33569056 33569087 -219687496 + AT_rich Low_complexity Low_complexity 1 31 0 2243 95 0 0 chr2 33570355 33570674 -219685909 - AluSq SINE Alu 0 319 1 394 306 118 85 chr2 33570834 33571081 -219685502 + L2 LINE L2 2920 3182 -90 2090 101 16 36 chr2 33571081 33571389 -219685194 + AluSc SINE Alu 1 302 -7 394 306 118 85 chr2 33571389 33571481 -219685102 + L2 LINE L2 3182 3270 -2 22 0 0 0 chr2 33571770 33571792 -219684791 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 33572616 33572637 -219683946 + AT_rich Low_complexity Low_complexity 1 21 0 2172 102 6 26 chr2 33574488 33574801 -219681782 + AluSg SINE Alu 1 307 -3 417 213 97 39 chr2 33574878 33575033 -219681550 - MLT1K LTR MaLR -7 581 418 440 288 42 54 chr2 33575315 33575555 -219681028 + Charlie8 DNA MER1_type 3 239 -2178 2295 114 0 3 chr2 33575999 33576305 -219680278 + AluSq SINE Alu 1 305 -8 1893 161 58 6 chr2 33576990 33577337 -219679246 - MER47A DNA MER2_type 0 366 2 2505 213 60 5 chr2 33577537 33578396 -219678187 - L1M4 LINE L1 -2792 3852 2886 2346 96 0 0 chr2 33578406 33578707 -219677876 - AluSx SINE Alu -11 301 1 609 160 34 0 chr2 33578739 33578858 -219677725 - L1M4 LINE L1 -5346 1196 1074 1876 253 41 20 chr2 33578858 33579368 -219677215 - L1M4 LINE L1 -6012 530 10 245 367 19 19 chr2 33579396 33579554 -219677029 + MIR SINE MIR 48 205 -57 1988 288 32 14 chr2 33579666 33580260 -219676323 - MLT2E LTR ERVL -23 605 1 501 284 7 0 chr2 33580836 33580977 -219675606 - ERVL LTR ERVL -3223 2541 2400 474 65 0 0 chr2 33580978 33581040 -219675543 + (CA)n Simple_repeat Simple_repeat 1 62 0 735 326 67 54 chr2 33581388 33582368 -219674215 - ERVL LTR ERVL -3799 1965 973 270 233 0 0 chr2 33582570 33582630 -219673953 + L1MEc LINE L1 38 97 -6299 661 276 128 42 chr2 33582632 33583038 -219673545 - MLT1H1 LTR MaLR -1 554 114 301 267 40 0 chr2 33583047 33583148 -219673435 + L1MEc LINE L1 2058 2162 -4234 1964 126 10 39 chr2 33583149 33583459 -219673124 - AluSx SINE Alu -4 308 8 2246 91 6 31 chr2 33583503 33583822 -219672761 + AluSx SINE Alu 1 311 -1 10548 45 3 78 chr2 33583864 33585361 -219671222 - SVA Other Other -1 1385 1 893 177 0 6 chr2 33587172 33587330 -219669253 + Tigger1 DNA MER2_type 2 158 -2260 * 1078 109 86 52 chr2 33587318 33587411 -219669172 + Tigger1 DNA MER2_type 2202 2290 -128 2206 100 0 29 chr2 33587411 33587720 -219668863 - AluSq SINE Alu -12 301 2 1078 109 86 52 chr2 33587720 33587836 -219668747 + Tigger1 DNA MER2_type 2290 2418 0 231 333 0 0 chr2 33589021 33589087 -219667496 - MIR SINE MIR -2 260 195 211 326 0 0 chr2 33589078 33589121 -219667462 - MIR SINE MIR -197 65 23 * 377 88 73 0 chr2 33589128 33589196 -219667387 - L1MB2 LINE L1 0 6171 6099 834 160 46 0 chr2 33589196 33589327 -219667256 + FLAM_C SINE Alu 2 138 -5 2387 110 14 60 chr2 33589337 33589783 -219666800 - L1MB2 LINE L1 -61 6110 5686 967 173 14 24 chr2 33590062 33590270 -219666313 + MER20 DNA MER1_type 13 218 -1 1871 235 193 17 chr2 33590555 33591568 -219665015 + L2 LINE L2 2017 3213 -100 206 368 69 74 chr2 33591641 33591996 -219664587 - L2 LINE L2 -9 3263 2909 468 0 0 0 chr2 33591996 33592048 -219664535 + (TG)n Simple_repeat Simple_repeat 2 53 0 206 368 69 74 chr2 33592048 33592113 -219664470 - L2 LINE L2 -363 2909 2845 2410 78 0 34 chr2 33592339 33592659 -219663924 - AluSg SINE Alu -1 309 1 13699 125 19 25 chr2 33593958 33595881 -219660702 - Tigger1 DNA MER2_type 0 2418 508 792 199 0 0 chr2 33595881 33596057 -219660526 - L1MA6 LINE L1 -1 6299 6124 13699 125 19 25 chr2 33596057 33596456 -219660127 - Tigger1 DNA MER2_type -1910 508 108 1853 180 0 0 chr2 33596499 33596805 -219659778 - AluJb SINE Alu -6 306 1 316 179 73 24 chr2 33596811 33596934 -219659649 - L1MC5 LINE L1 -184 7777 7649 1314 208 51 10 chr2 33596937 33597163 -219659420 - MER114 LTR ERV -243 405 155 2816 16 0 6 chr2 33597163 33597480 -219659103 - AluYb8 SINE Alu -3 315 1 1314 208 51 10 chr2 33597480 33597642 -219658941 - MER114 LTR ERV -493 155 1 23 92 0 0 chr2 33597935 33598000 -219658583 + AT_rich Low_complexity Low_complexity 1 65 0 225 271 0 0 chr2 33598111 33598170 -219658413 - MER94 DNA DNA -72 62 4 266 300 166 50 chr2 33598660 33599396 -219657187 - L2 LINE L2 -961 2353 1533 690 287 100 13 chr2 33599905 33600135 -219656448 - MIR SINE MIR 0 262 13 262 278 153 49 chr2 33600864 33601008 -219655575 + MIR SINE MIR 94 252 -10 24 0 0 0 chr2 33601898 33601922 -219654661 + AT_rich Low_complexity Low_complexity 1 24 0 188 225 213 38 chr2 33601987 33602067 -219654516 + MIR3 SINE MIR 83 176 -32 1779 185 11 19 chr2 33602116 33602484 -219654099 + MER47A DNA MER2_type 1 365 -1 311 256 136 8 chr2 33602592 33602717 -219653866 - MIR3 SINE MIR -32 176 36 23 0 0 0 chr2 33602790 33602813 -219653770 + AT_rich Low_complexity Low_complexity 1 23 0 296 287 213 30 chr2 33603268 33603470 -219653113 + MIR SINE MIR 21 259 -3 639 182 67 125 chr2 33603640 33603897 -219652686 + MER33 DNA MER1_type 15 250 -2335 1912 143 24 0 chr2 33603897 33604184 -219652399 - AluSx SINE Alu -8 304 11 639 182 67 125 chr2 33604184 33604255 -219652328 + MER33 DNA MER1_type 250 324 0 21 0 0 0 chr2 33604762 33604783 -219651800 + AT_rich Low_complexity Low_complexity 1 21 0 2451 62 0 3 chr2 33604912 33605217 -219651366 - AluY SINE Alu -7 304 1 619 171 45 45 chr2 33605378 33605554 -219651029 - MER104 DNA MER2_type -1 179 4 2252 117 0 3 chr2 33606321 33606629 -219649954 - AluSx SINE Alu -5 307 1 1566 158 39 39 chr2 33607004 33607315 -219649268 + MER2 DNA MER2_type 3 313 -32 4623 175 36 42 chr2 33608037 33608661 -219647922 - L1MB8 LINE L1 -3 6175 5549 2155 129 3 0 chr2 33608661 33608971 -219647612 + AluSx SINE Alu 1 311 -1 4623 175 36 42 chr2 33608971 33610158 -219646425 - L1MB8 LINE L1 -629 5549 4378 2143 137 0 0 chr2 33610158 33610457 -219646126 - AluSx SINE Alu -11 301 3 4623 175 36 42 chr2 33610457 33610614 -219645969 - L1MB8 LINE L1 -1800 4378 4222 1604 177 17 10 chr2 33610614 33610914 -219645669 - MER65C LTR ERV1 -34 427 126 462 271 81 47 chr2 33610918 33611317 -219645266 - L1MEc LINE L1 -5213 995 636 727 181 0 0 chr2 33611347 33611463 -219645120 - FLAM_C SINE Alu -17 116 1 208 346 145 34 chr2 33612969 33613528 -219643055 - L2 LINE L2 -189 3083 2461 453 308 43 11 chr2 33614672 33614912 -219641671 - L1MEc LINE L1 -756 1820 1520 384 271 120 77 chr2 33615064 33615307 -219641276 - L1MEc LINE L1 -4905 1300 1036 2206 115 0 3 chr2 33615307 33615611 -219640972 - AluSc SINE Alu -6 303 1 384 271 120 77 chr2 33615611 33615718 -219640865 - L1MEc LINE L1 -5169 1036 935 1779 138 0 61 chr2 33615845 33616157 -219640426 - AluSx SINE Alu -19 293 1 185 182 0 0 chr2 33617229 33617262 -219639321 - L2 LINE L2 -1 3271 3239 397 132 0 0 chr2 33617472 33617553 -219639030 + AluS SINE Alu 228 308 0 257 188 0 0 chr2 33618028 33618076 -219638507 - MIR3 SINE MIR -6 202 155 493 264 9 0 chr2 33618635 33618745 -219637838 - MIR SINE MIR 0 262 152 1824 161 19 22 chr2 33619354 33619665 -219636918 + AluJb SINE Alu 1 310 -2 23 0 0 0 chr2 33620133 33620156 -219636427 + AT_rich Low_complexity Low_complexity 1 23 0 1333 158 65 47 chr2 33620156 33620478 -219636105 - L1MA7 LINE L1 -6 6285 5958 1033 178 66 12 chr2 33620468 33620710 -219635873 - L1 LINE L1 -1781 4365 4111 * 266 327 45 0 chr2 33620872 33620982 -219635601 - L1ME LINE L1 -385 5736 5622 372 294 112 20 chr2 33621107 33621304 -219635279 - MIR SINE MIR -7 255 41 1017 178 0 22 chr2 33621437 33621622 -219634961 + FRAM SINE Alu 1 176 0 824 179 27 68 chr2 33621635 33621868 -219634715 - L1ME2 LINE L1 -66 6098 5881 255 395 8 8 chr2 33622048 33622172 -219634411 - MIR SINE MIR -111 151 28 3814 108 14 56 chr2 33622877 33623251 -219633332 + L1M4c LINE L1 1497 1833 -4551 2272 95 0 0 chr2 33623251 33623536 -219633047 - AluSx SINE Alu -27 285 1 3814 108 14 56 chr2 33623536 33623818 -219632765 + L1M4c LINE L1 1833 2125 -4259 7770 213 24 22 chr2 33623820 33625244 -219631339 + L1 LINE L1 2875 4294 -2088 333 0 0 0 chr2 33625244 33625281 -219631302 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1846 156 14 0 chr2 33625281 33625434 -219631149 - AluSx SINE Alu -32 280 120 333 0 0 0 chr2 33625434 33625471 -219631112 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1846 156 14 0 chr2 33625471 33625593 -219630990 - AluSx SINE Alu -192 120 1 7770 213 24 22 chr2 33625593 33626098 -219630485 + L1 LINE L1 4293 4810 -1572 4050 178 44 44 chr2 33676122 33676239 -219580344 - L1M4 LINE L1 -512 5672 5557 2179 129 3 0 chr2 33676239 33676549 -219580034 + AluSx SINE Alu 1 311 -1 4050 178 44 44 chr2 33676549 33677727 -219578856 - L1M4 LINE L1 -627 5557 4377 2166 139 0 7 chr2 33677727 33678037 -219578546 - AluSx SINE Alu -4 308 1 4050 178 44 44 chr2 33678037 33678194 -219578389 - L1M4 LINE L1 -1807 4377 4222 1519 173 17 10 chr2 33678194 33678494 -219578089 - MER65C LTR ERV1 -34 427 126 410 267 81 47 chr2 33678498 33678897 -219577686 - L1MEc LINE L1 -5213 995 636 737 181 0 0 chr2 33678927 33679043 -219577540 - FLAM_C SINE Alu -17 116 1 219 346 145 34 chr2 33680549 33681108 -219575475 - L2 LINE L2 -189 3083 2461 391 284 38 16 chr2 33682252 33682492 -219574091 - L1MEc LINE L1 -756 1820 1520 384 271 120 77 chr2 33682644 33682887 -219573696 - L1MEc LINE L1 -4905 1300 1036 2233 115 0 3 chr2 33682887 33683191 -219573392 - AluSc SINE Alu -6 303 1 384 271 120 77 chr2 33683191 33683298 -219573285 - L1MEc LINE L1 -5169 1036 935 1792 141 0 61 chr2 33683425 33683738 -219572845 - AluSx SINE Alu -18 294 1 184 182 0 0 chr2 33684810 33684843 -219571740 - L2 LINE L2 -1 3271 3239 375 132 0 0 chr2 33685053 33685134 -219571449 + AluS SINE Alu 228 308 0 259 188 0 0 chr2 33685609 33685657 -219570926 - MIR3 SINE MIR -6 202 155 493 264 9 0 chr2 33686216 33686326 -219570257 - MIR SINE MIR 0 262 152 1827 165 19 23 chr2 33686935 33687244 -219569339 + AluJb SINE Alu 1 308 -4 23 0 0 0 chr2 33687717 33687740 -219568843 + AT_rich Low_complexity Low_complexity 1 23 0 1237 158 65 47 chr2 33687740 33688062 -219568521 - L1MA7 LINE L1 -6 6285 5958 964 178 66 12 chr2 33688052 33688294 -219568289 - L1 LINE L1 -1781 4365 4111 * 242 327 45 0 chr2 33688456 33688566 -219568017 - L1ME LINE L1 -385 5736 5622 367 294 112 20 chr2 33688691 33688888 -219567695 - MIR SINE MIR -7 255 41 1058 173 0 22 chr2 33689021 33689206 -219567377 + FRAM SINE Alu 1 176 0 760 177 21 68 chr2 33689219 33689452 -219567131 - L1ME2 LINE L1 -66 6098 5881 258 395 8 8 chr2 33689632 33689756 -219566827 - MIR SINE MIR -111 151 28 3746 109 12 31 chr2 33690461 33690819 -219565764 + L1MB3 LINE L1 1497 1839 -4545 2288 106 0 0 chr2 33690819 33691120 -219565463 - AluSx SINE Alu -11 301 1 3746 109 12 31 chr2 33691120 33691402 -219565181 + L1MB3 LINE L1 1839 2125 -4259 7277 214 24 23 chr2 33691404 33692829 -219563754 + L1 LINE L1 2875 4296 -2086 369 0 0 0 chr2 33692829 33692870 -219563713 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 1863 156 14 0 chr2 33692870 33693023 -219563560 - AluSx SINE Alu -32 280 120 279 0 0 0 chr2 33693023 33693054 -219563529 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1863 156 14 0 chr2 33693054 33693176 -219563407 - AluSx SINE Alu -192 120 1 7277 214 24 23 chr2 33693176 33693698 -219562885 + L1 LINE L1 4295 4826 -1556 828 202 5 5 chr2 33693709 33693917 -219562666 + L1MB3 LINE L1 3491 3698 -2684 * 4958 164 20 40 chr2 33693904 33694188 -219562395 + L1MB3 LINE L1 4837 5125 -1294 2357 93 0 3 chr2 33694188 33694489 -219562094 + AluSx SINE Alu 1 300 -12 1492 199 7 21 chr2 33694489 33694775 -219561808 - AluJo SINE Alu -30 282 1 4958 164 20 40 chr2 33694775 33695422 -219561161 + L1MB3 LINE L1 5124 5782 -637 2270 88 20 0 chr2 33695422 33695718 -219560865 + AluY SINE Alu 1 302 -9 2378 62 0 7 chr2 33695719 33696037 -219560546 + AluY SINE Alu 1 316 0 4958 164 20 40 chr2 33696037 33696714 -219559869 + L1MB3 LINE L1 5781 6417 -2 765 173 89 129 chr2 33697229 33697481 -219559102 + MIR SINE MIR 4 241 -21 2170 96 20 3 chr2 33697482 33697775 -219558808 - AluSg SINE Alu -9 301 4 2302 115 0 6 chr2 33697783 33698097 -219558486 - AluSx SINE Alu 0 312 1 1163 192 147 34 chr2 33698494 33698910 -219557673 - MLT1C LTR MaLR -4 463 1 717 308 142 16 chr2 33699701 33700130 -219556453 + L2 LINE L2 1725 2207 -1107 2255 98 13 10 chr2 33701025 33701330 -219555253 + AluSx SINE Alu 1 306 -6 500 290 67 60 chr2 33701373 33701953 -219554630 + L1ME4a LINE L1 5363 5946 -175 534 263 121 18 chr2 33702376 33702600 -219553983 + MIR SINE MIR 5 251 -11 752 302 5 14 chr2 33702649 33702864 -219553719 + MIR SINE MIR 31 243 -19 1938 67 12 16 chr2 33703838 33704091 -219552492 + AluSc SINE Alu 43 294 -15 399 215 84 78 chr2 33704218 33704409 -219552174 - L1ME3A LINE L1 -3 6167 5976 394 251 132 74 chr2 33704530 33704977 -219551606 - HAL1 LINE L1 -9 2498 2026 219 350 154 36 chr2 33705127 33705226 -219551357 + L2 LINE L2 1993 2079 -1235 2304 101 3 7 chr2 33705226 33705532 -219551051 - AluSq SINE Alu -8 305 1 219 350 154 36 chr2 33705532 33705712 -219550871 + L2 LINE L2 2079 2305 -1009 302 252 76 76 chr2 33706574 33706693 -219549890 - L2 LINE L2 0 3272 3154 476 221 158 8 chr2 33706729 33706856 -219549727 + MER5A DNA MER1_type 4 149 -40 369 244 205 8 chr2 33706761 33706888 -219549695 - MER5A DNA MER1_type -24 165 14 * 2344 92 7 0 chr2 33707134 33707428 -219549155 + AluSg SINE Alu 1 296 -14 197 359 16 0 chr2 33707553 33707617 -219548966 - L2 LINE L2 -681 2633 2569 242 318 157 34 chr2 33707751 33708075 -219548508 - L2 LINE L2 -828 2486 2123 198 265 0 0 chr2 33710045 33710094 -219546489 - L2 LINE L2 -5 3267 3219 505 259 143 5 chr2 33710681 33710870 -219545713 + MIR SINE MIR 20 234 -28 2037 150 32 9 chr2 33711873 33712213 -219544370 + MER7A DNA MER2_type 1 346 0 2448 46 0 3 chr2 33712522 33712804 -219543779 - AluY SINE Alu 0 311 31 1830 145 34 30 chr2 33713333 33713629 -219542954 + AluJb SINE Alu 1 297 -15 605 222 99 12 chr2 33714413 33714575 -219542008 + FRAM SINE Alu 1 176 0 2204 112 0 10 chr2 33715073 33715369 -219541214 + AluSx SINE Alu 3 295 -17 265 254 151 0 chr2 33715574 33715700 -219540883 - MER113 DNA MER1_type? -345 176 32 264 252 89 59 chr2 33715785 33715920 -219540663 - MER5B DNA MER1_type -29 149 11 365 242 43 75 chr2 33717482 33717643 -219538940 - MARNA DNA Mariner -355 231 76 213 178 0 0 chr2 33719428 33719473 -219537110 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 23 0 0 0 chr2 33719827 33719850 -219536733 + AT_rich Low_complexity Low_complexity 1 23 0 383 121 0 0 chr2 33720087 33720145 -219536438 + Alu SINE Alu 245 302 0 206 227 0 0 chr2 33720373 33720417 -219536166 - MIR SINE MIR -1 261 218 2506 72 0 7 chr2 33720712 33721017 -219535566 + AluSq SINE Alu 1 303 -10 222 37 0 0 chr2 33721017 33721044 -219535539 + (TA)n Simple_repeat Simple_repeat 2 28 0 948 78 78 0 chr2 33722104 33722233 -219534350 + MER85 DNA T2_type 1 139 0 210 313 76 23 chr2 33723014 33723145 -219533438 + MIR SINE MIR 75 212 -50 303 282 84 15 chr2 33723501 33723632 -219532951 + MIR3 SINE MIR 2 141 -67 195 100 0 0 chr2 33724014 33724044 -219532539 + (TC)n Simple_repeat Simple_repeat 2 31 0 315 0 0 0 chr2 33724044 33724079 -219532504 + (CA)n Simple_repeat Simple_repeat 1 35 0 401 221 76 19 chr2 33724200 33724358 -219532225 - L1ME4a LINE L1 -11 6110 5944 1816 249 97 14 chr2 33724420 33724934 -219531649 - MER115 DNA AcHobo 0 693 137 336 24 0 0 chr2 33725228 33725269 -219531314 + (TG)n Simple_repeat Simple_repeat 2 42 0 386 141 16 0 chr2 33725301 33725365 -219531218 - MER20 DNA MER1_type -11 208 144 1707 103 0 5 chr2 33725365 33725632 -219530951 - AluSc SINE Alu 0 323 58 283 182 0 0 chr2 33725653 33725697 -219530886 - MER20 DNA MER1_type -172 47 4 621 221 91 20 chr2 33725698 33725952 -219530631 + L1ME3A LINE L1 961 1232 -4887 602 218 39 57 chr2 33726030 33726137 -219530446 + L1ME3A LINE L1 4356 4463 -1666 391 141 26 13 chr2 33726137 33726215 -219530368 + L1MA5A LINE L1 6219 6297 0 602 218 39 57 chr2 33726215 33726387 -219530196 + L1ME3A LINE L1 4463 4630 -1499 5970 161 30 7 chr2 33726408 33728303 -219528280 + L1PA14 LINE L1 4222 6158 -3 1604 243 68 58 chr2 33728335 33728972 -219527611 + L1ME3A LINE L1 5303 5945 -208 1720 78 9 0 chr2 33730663 33730882 -219525701 - AluSp SINE Alu -1 312 92 1442 250 103 53 chr2 33730977 33731542 -219525041 + MLT1E LTR MaLR 1 593 0 1674 130 31 0 chr2 33732441 33732702 -219523881 + MSTB1 LTR MaLR 1 269 -163 913 132 0 15 chr2 33732702 33732838 -219523745 - FLAM_C SINE Alu -9 134 1 1156 139 0 6 chr2 33732838 33733010 -219523573 + MSTB1 LTR MaLR 262 432 0 252 206 15 29 chr2 33733010 33733078 -219523505 - MER103 DNA DNA -46 120 54 279 280 60 30 chr2 33733520 33733620 -219522963 - L2 LINE L2 -1 3312 3210 23 33 0 0 chr2 33733830 33733860 -219522723 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 33734042 33734070 -219522513 + AT_rich Low_complexity Low_complexity 1 28 0 298 248 111 20 chr2 33734381 33734534 -219522049 + MIR SINE MIR 20 186 -76 194 135 0 27 chr2 33735708 33735745 -219520838 + MER5B DNA MER1_type 18 53 -125 * 211 169 195 26 chr2 33735712 33735789 -219520794 - MER5A DNA MER1_type -21 168 79 956 238 19 0 chr2 33735918 33736124 -219520459 - MER63A DNA MER1_type 0 210 1 355 113 19 0 chr2 33737774 33737827 -219518756 + MER5A DNA MER1_type 14 67 -122 241 336 69 0 chr2 33738072 33738188 -219518395 + MIR SINE MIR 28 151 -111 714 248 48 17 chr2 33738203 33738433 -219518150 - MIR SINE MIR -18 244 8 1743 54 0 5 chr2 33738697 33738902 -219517681 - AluY SINE Alu -18 293 90 1853 116 55 68 chr2 33738905 33739285 -219517298 + THE1C LTR MaLR 1 375 0 219 167 21 21 chr2 33740199 33740247 -219516336 + (CCCCG)n Simple_repeat Simple_repeat 5 52 0 196 348 29 22 chr2 33741114 33741252 -219515331 + L3b LINE CR1 1165 1303 -280 2244 118 48 25 chr2 33741556 33741912 -219514671 + THE1B LTR MaLR 1 364 0 11153 78 17 72 chr2 33741912 33742293 -219514290 + THE1B-int LTR MaLR 1 401 -1179 606 117 0 0 chr2 33742293 33742387 -219514196 - AluSc SINE Alu -1 308 215 11153 78 17 72 chr2 33742387 33743584 -219512999 + THE1B-int LTR MaLR 401 1580 0 2316 110 48 25 chr2 33743584 33743940 -219512643 + THE1B LTR MaLR 1 364 0 2989 90 27 25 chr2 33744374 33744417 -219512166 - MLT2A1 LTR ERVL 0 444 403 609 100 0 0 chr2 33744417 33744507 -219512076 + (TA)n Simple_repeat Simple_repeat 2 91 0 2989 90 27 25 chr2 33744507 33744906 -219511677 - MLT2A1 LTR ERVL -41 403 1 2605 102 14 6 chr2 33745540 33745901 -219510682 + THE1B LTR MaLR 1 364 0 992 296 65 12 chr2 33746067 33746469 -219510114 + LTR16A LTR ERVL 1 423 -27 237 178 32 185 chr2 33746666 33746823 -219509760 - MLT1K LTR MaLR -2 586 454 1123 228 95 58 chr2 33747137 33747171 -219509412 - MLT2B1 LTR ERVL -6 514 483 216 0 0 0 chr2 33747171 33747195 -219509388 + (TG)n Simple_repeat Simple_repeat 2 25 0 1123 228 95 58 chr2 33747195 33747485 -219509098 - MLT2B1 LTR ERVL -37 483 178 850 225 38 0 chr2 33747517 33747730 -219508853 + L1M4 LINE L1 2572 2792 -3354 238 200 144 67 chr2 33747730 33747820 -219508763 - MLT1F LTR MaLR -443 99 3 2118 118 24 0 chr2 33749757 33750044 -219506539 - AluSx SINE Alu -18 294 1 225 179 0 0 chr2 33750345 33750384 -219506199 + MARNA DNA Mariner 199 237 -349 1830 110 26 71 chr2 33750647 33750957 -219505626 + AluSg SINE Alu 1 296 -14 297 241 11 11 chr2 33751157 33751244 -219505339 - ALR/Alpha Satellite centromeric -16 156 70 441 206 169 38 chr2 33752177 33752337 -219504246 - MER5A DNA MER1_type 0 189 9 243 262 49 0 chr2 33753438 33753499 -219503084 + MIR SINE MIR 28 91 -171 546 336 20 25 chr2 33753504 33753748 -219502835 + MIR SINE MIR 18 260 -2 506 241 89 35 chr2 33754725 33754928 -219501655 - L1ME3A LINE L1 -169 6001 5788 679 233 93 28 chr2 33755098 33755313 -219501270 + MIR SINE MIR 34 262 0 255 314 16 47 chr2 33755379 33755570 -219501013 + L2 LINE L2 2879 3063 -209 48 18 0 0 chr2 33755639 33755694 -219500889 + AT_rich Low_complexity Low_complexity 1 55 0 499 196 59 0 chr2 33755803 33755905 -219500678 + Charlie1a DNA MER1_type 93 200 -1255 555 99 0 12 chr2 33755907 33755988 -219500595 + AluSx SINE Alu 2 81 -232 733 95 0 0 chr2 33755988 33756083 -219500500 - LTR12 LTR ERV1 -8 706 612 323 191 34 22 chr2 33756083 33756172 -219500411 - LTR30 LTR ERV1 -80 642 553 1667 84 0 68 chr2 33756173 33756423 -219500160 - LTR12 LTR ERV1 -429 285 53 270 231 0 0 chr2 33756423 33756475 -219500108 - LTR30 LTR ERV1 -670 52 1 1747 116 0 4 chr2 33756475 33756717 -219499866 + AluSx SINE Alu 71 311 -1 2515 199 40 31 chr2 33756720 33757267 -219499316 + Charlie1a DNA MER1_type 192 743 -712 5191 138 40 60 chr2 33757314 33758017 -219498566 - L1MA7 LINE L1 -14 6277 5561 712 186 0 24 chr2 33758017 33758141 -219498442 + FLAM_A SINE Alu 1 121 -12 5191 138 40 60 chr2 33758141 33758473 -219498110 - L1MA7 LINE L1 -730 5561 5274 1691 181 20 13 chr2 33758473 33758777 -219497806 - AluJo SINE Alu -6 306 1 5191 138 40 60 chr2 33758777 33758972 -219497611 - L1MA7 LINE L1 -1017 5274 5077 2266 83 0 4 chr2 33759386 33759664 -219496919 + AluSc SINE Alu 1 277 -32 204 67 0 0 chr2 33759664 33759694 -219496889 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 696 231 24 52 chr2 33760028 33760266 -219496317 - L1MD3 LINE L1 -1 7994 6024 414 39 0 0 chr2 33760285 33760337 -219496246 + (TG)n Simple_repeat Simple_repeat 1 52 0 2159 104 4 0 chr2 33760337 33760615 -219495968 - AluSx SINE Alu -33 279 1 332 279 58 0 chr2 33760792 33760896 -219495687 + MIR SINE MIR 80 189 -73 982 287 102 18 chr2 33760947 33761365 -219495218 - LTR16A LTR ERVL 0 450 1 1843 170 7 0 chr2 33762294 33762582 -219494001 + AluJo SINE Alu 1 290 -22 464 291 108 24 chr2 33763181 33763394 -219493189 + MIR SINE MIR 32 262 0 1789 190 46 3 chr2 33763580 33763969 -219492614 + L1 LINE L1 4114 4519 -1627 387 0 0 0 chr2 33763969 33764012 -219492571 + (TCTCCC)n Simple_repeat Simple_repeat 6 48 0 309 298 32 0 chr2 33764021 33764145 -219492438 - L1M4 LINE L1 -2946 3200 3073 309 305 25 0 chr2 33764116 33764234 -219492349 - L1M4 LINE L1 -2953 3193 3073 1242 100 0 0 chr2 33764246 33764426 -219492157 + (T)n Simple_repeat Simple_repeat 1 180 0 7159 64 11 62 chr2 33765428 33767853 -219488730 + SVA Other Other 373 1386 0 5556 109 41 18 chr2 33767853 33768816 -219487767 + L1PA16 LINE L1 4508 5507 -659 2371 96 3 13 chr2 33768816 33769129 -219487454 + AluSx SINE Alu 1 310 -2 5556 109 41 18 chr2 33769129 33769796 -219486787 + L1PA16 LINE L1 5507 6157 -9 2276 94 0 0 chr2 33769814 33770102 -219486481 - AluSx SINE Alu -24 288 1 25 0 0 0 chr2 33770175 33770200 -219486383 + AT_rich Low_complexity Low_complexity 1 25 0 1667 202 104 60 chr2 33770349 33770493 -219486090 + MER114 LTR ERV 19 155 -493 2371 70 0 3 chr2 33770493 33770820 -219485763 + AluY SINE Alu 1 326 0 1667 202 104 60 chr2 33770820 33771169 -219485414 + MER114 LTR ERV 155 544 -104 802 226 0 63 chr2 33771169 33771278 -219485305 + MER45A DNA AcHobo 1 95 -1486 2075 131 0 0 chr2 33771278 33771569 -219485014 - AluSx SINE Alu -16 296 6 802 226 0 63 chr2 33771569 33771649 -219484934 + MER45A DNA AcHobo 95 178 0 1667 202 104 60 chr2 33771649 33771718 -219484865 + MER114 LTR ERV 544 608 -40 3568 90 45 4 chr2 33771747 33772236 -219484347 - MER75 DNA T2_type -5 509 1 2371 196 57 75 chr2 33772788 33772998 -219483585 + L1MA9 LINE L1 5455 5667 -636 2353 113 3 0 chr2 33772998 33773309 -219483274 + AluSx SINE Alu 1 312 0 2371 196 57 75 chr2 33773309 33773964 -219482619 + L1MA9 LINE L1 5667 6277 -26 693 138 41 0 chr2 33776406 33776529 -219480054 - L1MB4 LINE L1 0 6180 6053 6171 44 3 0 chr2 33777001 33777746 -219478837 + L1PA5 LINE L1 5401 6147 -7 2208 145 0 0 chr2 33777988 33778299 -219478284 - AluSx SINE Alu -1 311 1 2020 112 3 75 chr2 33778886 33779208 -219477375 - AluSx SINE Alu -13 299 1 379 241 74 18 chr2 33780676 33780879 -219475704 - MLT1L LTR MaLR 0 615 367 954 136 0 0 chr2 33781332 33781472 -219475111 - AluJ SINE Alu -15 297 158 636 135 58 0 chr2 33781473 33781577 -219475006 - AluJ SINE Alu -201 111 2 856 209 0 12 chr2 33781578 33781741 -219474842 - FRAM SINE Alu -2 164 4 382 305 8 0 chr2 33781757 33781875 -219474708 + L2 LINE L2 3195 3313 0 934 203 50 0 chr2 33781930 33781973 -219474610 + MIR SINE MIR 48 87 -175 1777 148 0 43 chr2 33781973 33782299 -219474284 - AluJb SINE Alu 0 312 1 934 203 50 0 chr2 33782299 33782457 -219474126 + MIR SINE MIR 87 259 -3 323 167 143 0 chr2 33782480 33782564 -219474019 + MIR SINE MIR 97 192 -70 237 292 69 56 chr2 33782690 33782834 -219473749 - MIR SINE MIR -75 187 42 4852 105 52 64 chr2 33782979 33783810 -219472773 - LTR12 LTR ERV1 -1 825 5 2494 192 37 24 chr2 33783825 33784420 -219472163 - pTR5 LTR ERV1 -1093 1345 743 5501 150 99 78 chr2 33784488 33785074 -219471509 + L1MC3 LINE L1 6494 7066 -719 252 263 38 12 chr2 33785074 33785154 -219471429 + MLT1F1 LTR MaLR 35 116 -451 5501 150 99 78 chr2 33785154 33785745 -219470838 + L1MC3 LINE L1 7066 7776 -9 1402 183 76 64 chr2 33785781 33785944 -219470639 + L1MEc LINE L1 2162 2321 -3894 2329 114 0 9 chr2 33785944 33786259 -219470324 + AluSx SINE Alu 1 312 0 1402 183 76 64 chr2 33786259 33786657 -219469926 + L1MEc LINE L1 2321 2687 -3528 1636 228 45 91 chr2 33786690 33787503 -219469080 - L1MEc LINE L1 -4050 2346 1575 1949 126 16 38 chr2 33787503 33787820 -219468763 + AluSx SINE Alu 1 310 -2 1636 228 45 91 chr2 33787820 33787882 -219468701 - L1MEc LINE L1 -4821 1575 1512 1499 155 41 48 chr2 33787944 33788235 -219468348 - AluJb SINE Alu 0 312 24 347 284 71 15 chr2 33788238 33788435 -219468148 - L1MEc LINE L1 -5098 1298 1091 4616 115 18 40 chr2 33788864 33789630 -219466953 + L1MA9 LINE L1 5559 6307 -5 401 222 0 0 chr2 33789963 33790044 -219466539 - MARNA DNA Mariner -16 570 490 326 333 63 0 chr2 33790062 33790221 -219466362 + MER117 DNA MER1_type 29 197 0 246 287 139 0 chr2 33790224 33790325 -219466258 + MIR SINE MIR 12 126 -136 247 263 62 25 chr2 33790425 33790505 -219466078 + MARNA DNA Mariner 84 166 -420 2347 171 9 119 chr2 33790553 33791132 -219465451 + MLT2B2 LTR ERVL 1 515 0 866 263 29 29 chr2 33791142 33791450 -219465133 + MARNA DNA Mariner 262 569 -17 1705 149 22 53 chr2 33791765 33792087 -219464496 + AluJo SINE Alu 1 312 0 388 308 105 0 chr2 33792248 33792381 -219464202 + MER115 DNA AcHobo 1 147 -546 1308 189 117 7 chr2 33792382 33792904 -219463679 + MLT1E1 LTR MaLR 1 638 -16 303 219 73 0 chr2 33792953 33793035 -219463548 + MER5C DNA MER1_type 37 124 -200 21 0 0 0 chr2 33793041 33793062 -219463521 + AT_rich Low_complexity Low_complexity 1 21 0 1475 281 29 56 chr2 33793127 33793679 -219462904 + MER115 DNA AcHobo 157 693 0 1390 157 73 76 chr2 33793886 33794357 -219462226 + MSTD LTR MaLR 15 396 0 2078 206 34 26 chr2 33794478 33794979 -219461604 + MLT1D LTR MaLR 1 505 0 210 322 66 44 chr2 33796486 33796669 -219459914 - MIR SINE MIR -70 192 6 29 0 0 0 chr2 33796911 33796940 -219459643 + AT_rich Low_complexity Low_complexity 1 29 0 1914 138 14 0 chr2 33796940 33797223 -219459360 - AluJb SINE Alu -25 287 1 817 146 110 12 chr2 33797231 33797395 -219459188 - L1MA2 LINE L1 0 6304 6125 315 223 50 0 chr2 33798780 33798886 -219457697 - MIR SINE MIR -66 196 85 392 328 16 0 chr2 33799356 33799484 -219457099 - MIR SINE MIR -126 136 7 561 255 25 12 chr2 33799606 33799767 -219456816 - MIR SINE MIR -70 192 30 627 198 0 0 chr2 33799770 33799881 -219456702 + FLAM_A SINE Alu 21 131 -11 517 103 10 31 chr2 33799881 33799978 -219456605 - Charlie5 DNA MER1_type -73 2539 2445 * 1191 184 40 32 chr2 33799977 33800227 -219456356 - Charlie5 DNA MER1_type -2346 266 15 2231 111 0 25 chr2 33800837 33800975 -219455608 + AluSg SINE Alu 1 141 -169 2207 95 0 48 chr2 33800975 33801291 -219455292 + AluSp SINE Alu 1 301 -12 2231 111 0 25 chr2 33801291 33801467 -219455116 + AluSg SINE Alu 141 307 -3 417 86 0 0 chr2 33803025 33803083 -219453500 + (GA)n Simple_repeat Simple_repeat 1 58 0 3201 178 31 12 chr2 33803265 33803671 -219452912 + L1M4 LINE L1 4668 5065 -1119 2084 142 0 0 chr2 33803671 33803974 -219452609 - AluSx SINE Alu -9 303 1 3201 178 31 12 chr2 33803974 33804675 -219451908 + L1M4 LINE L1 5065 5792 -392 1191 170 97 76 chr2 33804698 33804987 -219451596 - AluJb SINE Alu -7 295 1 1754 143 18 122 chr2 33804988 33805128 -219451455 - L1MB5 LINE L1 -137 6037 5884 207 114 0 0 chr2 33805128 33805163 -219451420 + (TG)n Simple_repeat Simple_repeat 2 36 0 1754 143 18 122 chr2 33805163 33805297 -219451286 - L1MB5 LINE L1 -290 5884 5822 450 0 0 0 chr2 33805297 33805347 -219451236 + (TA)n Simple_repeat Simple_repeat 2 51 0 1754 143 18 122 chr2 33805347 33805506 -219451077 - L1MB5 LINE L1 -352 5822 5648 237 311 67 43 chr2 33805620 33805784 -219450799 - MIR3 SINE MIR -2 206 39 228 227 125 0 chr2 33806020 33806108 -219450475 - MER102a DNA MER1_type -1 329 231 2146 134 0 0 chr2 33807273 33807572 -219449011 - AluSx SINE Alu -13 299 1 339 25 0 0 chr2 33809158 33809198 -219447385 + (TG)n Simple_repeat Simple_repeat 1 40 0 529 14 29 0 chr2 33809198 33809268 -219447315 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 2288 96 0 43 chr2 33809361 33809562 -219447021 + AluSx SINE Alu 1 184 -128 2525 68 3 0 chr2 33809562 33809857 -219446726 - AluY SINE Alu -15 296 1 993 73 0 0 chr2 33809857 33809979 -219446604 + AluSg/x SINE Alu 189 310 -2 2288 96 0 43 chr2 33809857 33809979 -219446604 + AluSx SINE Alu 184 310 -2 967 292 80 41 chr2 33810194 33810323 -219446260 + L2 LINE L2 2460 2583 -730 2240 144 55 0 chr2 33810323 33810670 -219445913 - MER47A DNA MER2_type 0 366 1 967 292 80 41 chr2 33810670 33811117 -219445466 + L2 LINE L2 2583 3084 -229 2312 116 0 0 chr2 33811117 33811427 -219445156 - AluSq SINE Alu -3 310 1 967 292 80 41 chr2 33811427 33811666 -219444917 + L2 LINE L2 3084 3312 -1 244 323 40 91 chr2 33811671 33811828 -219444755 - L3 LINE CR1 -193 1384 1247 2239 100 0 23 chr2 33811828 33812129 -219444454 - AluSq SINE Alu -19 294 1 244 323 40 91 chr2 33812129 33812268 -219444315 - L3 LINE CR1 -330 1247 1103 180 0 0 0 chr2 33812271 33812291 -219444292 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2550 63 0 3 chr2 33812313 33812615 -219443968 + AluY SINE Alu 7 307 -4 317 330 18 9 chr2 33812772 33812881 -219443702 - L3 LINE CR1 -1432 145 36 30 0 0 0 chr2 33812889 33812919 -219443664 + AT_rich Low_complexity Low_complexity 1 30 0 848 163 26 18 chr2 33813094 33813481 -219443102 + CT-rich Low_complexity Low_complexity 1 390 0 1536 39 0 0 chr2 33813512 33813923 -219442660 + (G)n Simple_repeat Simple_repeat 1 411 0 22 0 0 0 chr2 33814958 33814980 -219441603 + AT_rich Low_complexity Low_complexity 1 22 0 227 286 7 38 chr2 33815013 33815214 -219441369 + A-rich Low_complexity Low_complexity 1 194 0 214 261 7 42 chr2 33815409 33815551 -219441032 + A-rich Low_complexity Low_complexity 2 138 0 267 300 0 0 chr2 33815593 33815693 -219440890 + A-rich Low_complexity Low_complexity 1 100 0 2266 89 3 3 chr2 33816827 33817118 -219439465 + AluSg SINE Alu 1 291 -19 2299 93 0 13 chr2 33817130 33817432 -219439151 - AluSx SINE Alu -14 298 1 248 333 133 7 chr2 33818246 33818381 -219438202 + MIR SINE MIR 2 153 -109 2085 103 20 33 chr2 33818514 33818816 -219437767 - AluSq SINE Alu -15 298 1 2118 141 7 0 chr2 33818817 33819123 -219437460 - AluSx SINE Alu -4 308 1 450 310 47 43 chr2 33819246 33819357 -219437226 + MIR SINE MIR 30 139 -123 2350 102 76 12 chr2 33819357 33819699 -219436884 - THE1B LTR MaLR 0 364 1 450 310 47 43 chr2 33819699 33819819 -219436764 + MIR SINE MIR 139 262 0 1005 82 0 0 chr2 33821232 33821354 -219435229 + AluSp SINE Alu 11 132 -181 2171 115 24 0 chr2 33821356 33821652 -219434931 + AluSp SINE Alu 1 303 -10 2298 121 0 10 chr2 33822223 33822537 -219434046 + AluSx SINE Alu 1 311 -1 994 216 28 18 chr2 33823465 33823683 -219432900 + MER58A DNA MER1_type 1 220 -4 212 270 61 61 chr2 33824504 33824700 -219431883 - L2 LINE L2 -188 3084 2889 205 268 54 0 chr2 33824705 33824761 -219431822 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 220 289 141 33 chr2 33825489 33825610 -219430973 - L2 LINE L2 0 3272 3139 2064 126 7 7 chr2 33825828 33826130 -219430453 + AluSx SINE Alu 1 302 -10 545 213 192 25 chr2 33826447 33826687 -219429896 - L1ME4a LINE L1 -4 6117 5838 305 268 101 18 chr2 33827312 33827480 -219429103 - L1MDa LINE L1 -3855 2685 2504 300 53 0 0 chr2 33827743 33827781 -219428802 + (CA)n Simple_repeat Simple_repeat 1 38 0 270 275 147 32 chr2 33828011 33828320 -219428263 - L1MDa LINE L1 -800 2101 1663 21 71 0 0 chr2 33828646 33828688 -219427895 + AT_rich Low_complexity Low_complexity 1 42 0 969 231 5 0 chr2 33828698 33828884 -219427699 + MER58A DNA MER1_type 34 220 -4 977 268 114 82 chr2 33828894 33829663 -219426920 - L1MDa LINE L1 -5314 1216 423 262 254 0 0 chr2 33829780 33829843 -219426740 + MIR SINE MIR 17 79 -183 1087 189 51 32 chr2 33829856 33829897 -219426686 - MER58A DNA MER1_type -2199 221 182 1624 170 77 12 chr2 33829897 33830220 -219426363 + MER2 DNA MER2_type 1 344 0 1087 189 51 32 chr2 33830220 33830395 -219426188 - MER58A DNA MER1_type -2238 182 1 352 190 50 33 chr2 33830396 33830500 -219426083 + MIR SINE MIR 89 197 -65 3740 155 26 8 chr2 33830500 33831124 -219425459 + MER41B LTR ERV1 1 635 0 352 190 50 33 chr2 33831124 33831140 -219425443 + MIR SINE MIR 197 211 -51 812 245 62 29 chr2 33831298 33831571 -219425012 - MLT1I LTR MaLR -25 384 103 673 268 38 11 chr2 33831587 33831928 -219424655 + LTR16A LTR ERVL 52 440 -10 306 266 43 11 chr2 33832060 33832154 -219424429 - MIR SINE MIR -1 261 165 792 210 7 0 chr2 33832213 33832356 -219424227 + MER58B DNA MER1_type 198 341 0 3020 113 64 43 chr2 33832447 33832637 -219423946 + MER4D LTR ERV1 1 186 -593 2115 122 3 3 chr2 33832637 33832933 -219423650 + AluSp SINE Alu 1 296 -17 3020 113 64 43 chr2 33832933 33833511 -219423072 + MER4D LTR ERV1 186 779 0 249 304 0 0 chr2 33834211 33834267 -219422316 - MIR SINE MIR -192 70 15 1704 136 99 7 chr2 33834507 33834780 -219421803 - AluJb SINE Alu -12 300 3 903 139 0 0 chr2 33834784 33834921 -219421662 - L1PB4 LINE L1 -1 6155 6019 216 218 18 0 chr2 33834968 33835023 -219421560 + (TGAA)n Simple_repeat Simple_repeat 2 57 0 192 287 195 11 chr2 33835139 33835226 -219421357 - L2 LINE L2 -2 3270 3168 546 28 83 0 chr2 33836365 33836437 -219420146 - MADE1 DNA Mariner -2 78 1 2141 113 0 0 chr2 33836811 33837095 -219419488 + AluSx SINE Alu 1 284 -28 610 30 116 0 chr2 33837095 33837390 -219419193 + (TA)n Simple_repeat Simple_repeat 1 329 0 2466 72 0 0 chr2 33838171 33838462 -219418121 - AluSg SINE Alu -19 291 1 2136 99 0 51 chr2 33839016 33839328 -219417255 - AluSx SINE Alu -16 296 1 230 259 34 13 chr2 33839660 33839901 -219416682 + CT-rich Low_complexity Low_complexity 1 246 0 2165 131 3 6 chr2 33840782 33841094 -219415489 - AluSx SINE Alu -1 311 1 919 129 15 0 chr2 33841095 33841227 -219415356 - AluSq/x SINE Alu -179 134 1 249 57 0 0 chr2 33841239 33841274 -219415309 + (T)n Simple_repeat Simple_repeat 1 35 0 304 298 10 0 chr2 33841514 33841567 -219415016 - MIR SINE MIR -79 129 78 2532 75 53 8 chr2 33841567 33841926 -219414657 + THE1C LTR MaLR 1 375 0 304 298 10 0 chr2 33841926 33841976 -219414607 - MIR SINE MIR -130 78 25 770 126 0 0 chr2 33842638 33842749 -219413834 - HY1 scRNA scRNA -1 111 1 398 296 85 0 chr2 33842859 33843035 -219413548 - MIR3 SINE MIR -3 205 15 212 235 0 47 chr2 33844339 33844424 -219412159 + C-rich Low_complexity Low_complexity 2 82 0 21 89 0 0 chr2 33844566 33844622 -219411961 + GC_rich Low_complexity Low_complexity 1 56 0 189 0 0 0 chr2 33844919 33844940 -219411643 + (CCG)n Simple_repeat Simple_repeat 1 21 0 216 125 0 42 chr2 33845120 33845168 -219411415 + (CCCG)n Simple_repeat Simple_repeat 4 49 0 666 198 87 52 chr2 33847556 33847572 -219409011 + AluSg/x SINE Alu 120 134 -178 2260 103 13 7 chr2 33847572 33847873 -219408710 + AluSx SINE Alu 1 303 -9 666 198 87 52 chr2 33847873 33848028 -219408555 + AluSg/x SINE Alu 134 297 -15 373 272 40 39 chr2 33848817 33849010 -219407573 + MIR SINE MIR 2 191 -71 1781 161 2 99 chr2 33851568 33851991 -219404592 - MLT1B LTR MaLR -6 384 3 230 271 239 32 chr2 33852282 33852437 -219404146 - MER5A DNA MER1_type -2 187 1 23 54 0 0 chr2 33852777 33852814 -219403769 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 33852925 33852954 -219403629 + AT_rich Low_complexity Low_complexity 1 29 0 8877 117 41 5 chr2 33853192 33854526 -219402057 - Tigger1 DNA MER2_type 0 2418 1037 3893 140 32 2 chr2 33854524 33855115 -219401468 - Tigger1 DNA MER2_type -1809 609 1 * 335 316 22 61 chr2 33855367 33855598 -219400985 + MIR SINE MIR 2 223 -39 383 165 25 0 chr2 33856839 33856918 -219399665 + (TATATG)n Simple_repeat Simple_repeat 2 82 0 2176 125 0 0 chr2 33856919 33857214 -219399369 - AluSx SINE Alu -13 299 5 182 329 49 12 chr2 33857414 33857496 -219399087 + MIR SINE MIR 67 151 -111 188 182 0 73 chr2 33857587 33857642 -219398941 + L2 LINE L2 3171 3221 -92 339 25 0 0 chr2 33857696 33857736 -219398847 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 289 330 165 0 chr2 33857997 33858173 -219398410 - L2 LINE L2 -252 3061 2857 21 36 0 0 chr2 33858725 33858753 -219397830 + AT_rich Low_complexity Low_complexity 1 28 0 2444 80 3 0 chr2 33858961 33859260 -219397323 + AluSq SINE Alu 1 300 -13 744 204 87 0 chr2 33860067 33860239 -219396344 + MER5A DNA MER1_type 3 189 0 1886 149 0 21 chr2 33860520 33860808 -219395775 - AluJo SINE Alu -30 282 1 418 292 45 17 chr2 33860990 33861168 -219395415 + MER5A DNA MER1_type 7 189 0 22 80 0 0 chr2 33862024 33862074 -219394509 + AT_rich Low_complexity Low_complexity 1 50 0 2170 77 11 0 chr2 33862088 33862362 -219394221 + AluSc SINE Alu 31 307 -2 6180 226 46 21 chr2 33862480 33865277 -219391306 - L1MC1 LINE L1 -2 6400 3676 216 0 0 0 chr2 33865277 33865301 -219391282 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1563 166 12 4 chr2 33865307 33865560 -219391023 - AluSx SINE Alu -54 258 4 6180 226 46 21 chr2 33865560 33866011 -219390572 - L1MC1 LINE L1 -2730 3672 2161 1070 178 0 0 chr2 33866013 33866193 -219390390 - AluJb SINE Alu -4 308 129 2250 84 3 36 chr2 33866215 33866523 -219390060 - AluSx SINE Alu -14 298 1 387 0 0 0 chr2 33866527 33866570 -219390013 + (TG)n Simple_repeat Simple_repeat 2 44 0 13391 198 30 14 chr2 33866581 33868300 -219388283 - L1PA15 LINE L1 -13 6152 4462 375 41 0 0 chr2 33868300 33868349 -219388234 + (TG)n Simple_repeat Simple_repeat 2 50 0 13391 198 30 14 chr2 33868349 33869875 -219386708 - L1PA15 LINE L1 -1703 4462 2839 2032 151 58 28 chr2 33869875 33870239 -219386344 + THE1C LTR MaLR 1 375 0 13391 198 30 14 chr2 33870239 33870704 -219385879 - L1PA15 LINE L1 -3326 2839 2383 6927 111 23 13 chr2 33870739 33871926 -219384657 - L1MA1 LINE L1 0 7721 6520 4829 218 24 25 chr2 33871930 33873716 -219382867 - L1PA13 LINE L1 -3755 3829 2018 306 321 43 52 chr2 33874863 33875190 -219381393 - L1PA13 LINE L1 -7202 379 56 * 11102 150 42 23 chr2 33875168 33878601 -219377982 - L1MA1 LINE L1 -1647 5937 2478 1350 160 15 46 chr2 33878625 33878887 -219377696 - L1MCa LINE L1 -6167 259 6 2481 112 77 0 chr2 33878917 33879255 -219377328 + THE1B LTR MaLR 1 364 0 11608 92 35 26 chr2 33879255 33880820 -219375763 + THE1B-int LTR MaLR 1 1580 0 2682 118 3 6 chr2 33880820 33881185 -219375398 + THE1B LTR MaLR 1 364 0 215 292 62 0 chr2 33881694 33881759 -219374824 + L3b LINE CR1 1429 1497 -86 206 278 0 19 chr2 33881828 33881882 -219374701 - MIR SINE MIR -61 147 95 2255 64 3 37 chr2 33881937 33882262 -219374321 + AluSx SINE Alu 1 315 0 492 283 14 0 chr2 33882565 33882710 -219373873 - MIR SINE MIR -14 248 102 250 204 0 0 chr2 33882971 33883020 -219373563 - L2 LINE L2 -1 3312 3264 276 160 0 20 chr2 33883344 33883394 -219373189 + L2 LINE L2 3264 3312 -1 1036 281 42 85 chr2 33883668 33883810 -219372773 - MLT1K LTR MaLR -15 573 427 866 208 6 44 chr2 33883810 33883993 -219372590 - MER45A DNA AcHobo -2 176 1 1036 281 42 85 chr2 33883993 33884391 -219372192 - MLT1K LTR MaLR -161 427 56 237 267 89 40 chr2 33884800 33884901 -219371682 + MIR SINE MIR 33 138 -70 1490 225 97 36 chr2 33885109 33885575 -219371008 + MLT1D LTR MaLR 12 505 0 912 185 201 6 chr2 33886444 33886768 -219369815 - LTR37A LTR ERV1 0 426 40 634 250 199 9 chr2 33887038 33887254 -219369329 + MIR SINE MIR 6 262 0 956 147 0 0 chr2 33887273 33887409 -219369174 + FRAM SINE Alu 18 153 -23 379 346 21 56 chr2 33889010 33889244 -219367339 - L3 LINE CR1 -23 1554 1329 235 256 139 111 chr2 33889395 33889739 -219366844 - L2 LINE L2 -8 3264 2911 308 254 52 57 chr2 33891018 33891181 -219365402 - MIR3 SINE MIR -8 200 37 360 0 0 0 chr2 33891267 33891307 -219365276 + (TG)n Simple_repeat Simple_repeat 2 41 0 931 254 37 16 chr2 33891514 33891758 -219364825 - MIR SINE MIR -3 259 11 2451 81 0 0 chr2 33891767 33892064 -219364519 - AluSp SINE Alu -16 297 1 495 226 50 83 chr2 33892069 33892205 -219364378 + MER5B DNA MER1_type 2 132 -46 1656 199 24 0 chr2 33892205 33892492 -219364091 + AluJo SINE Alu 1 294 -18 495 226 50 83 chr2 33892492 33892536 -219364047 + MER5B DNA MER1_type 132 176 -2 401 223 254 0 chr2 33892571 33892701 -219363882 - MER5A DNA MER1_type 0 189 27 2370 74 0 26 chr2 33892797 33893108 -219363475 + AluY SINE Alu 1 303 -8 352 261 118 0 chr2 33893120 33893239 -219363344 - MIR SINE MIR -26 236 104 2206 150 33 25 chr2 33893415 33893775 -219362808 - MLT1A1 LTR MaLR -2 363 1 357 247 22 11 chr2 33893778 33893867 -219362716 - L2 LINE L2 -1 3271 3182 410 226 122 37 chr2 33893978 33894142 -219362441 - MIR SINE MIR -83 179 2 2184 103 0 0 chr2 33894177 33894482 -219362101 - AluSx SINE Alu 0 305 1 1717 182 24 0 chr2 33894526 33894823 -219361760 + AluJo SINE Alu 1 304 -8 445 313 66 24 chr2 33895359 33895525 -219361058 + MER5A DNA MER1_type 14 186 -3 2516 75 7 0 chr2 33895533 33895840 -219360743 + AluSc SINE Alu 1 309 0 1185 221 75 31 chr2 33895885 33896234 -219360349 + MLT1A2 LTR MaLR 9 372 -2 883 143 119 0 chr2 33896247 33896415 -219360168 + MER5A DNA MER1_type 1 188 -1 483 212 30 0 chr2 33896423 33896522 -219360061 + MER5A DNA MER1_type 3 104 -85 226 328 34 42 chr2 33896579 33896698 -219359885 + MER5B DNA MER1_type 2 119 -59 470 85 0 4 chr2 33896907 33897119 -219359464 + AluSg SINE Alu 1 289 -21 439 264 86 40 chr2 33897242 33897416 -219359167 - MER5A DNA MER1_type 0 189 8 270 322 44 0 chr2 33897451 33897541 -219359042 - MER5A DNA MER1_type -26 163 70 1890 131 89 145 chr2 33897548 33898030 -219358553 + LTR32 LTR ERVL 15 469 -2 1013 211 11 0 chr2 33898577 33898762 -219357821 - MER5A DNA MER1_type -2 187 1 195 69 0 0 chr2 33899961 33899990 -219356593 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1982 134 0 0 chr2 33899998 33900275 -219356308 - AluSx SINE Alu -35 277 1 406 326 0 57 chr2 33900657 33900798 -219355785 - MIR SINE MIR -115 147 15 221 348 18 9 chr2 33900805 33900917 -219355666 + L3 LINE CR1 1113 1225 -352 2472 136 46 35 chr2 33901011 33901445 -219355138 + MER65A LTR ERV1 3 441 -4 187 245 96 53 chr2 33901447 33901541 -219355042 + L3 LINE CR1 1368 1465 -112 419 100 75 0 chr2 33901707 33901787 -219354796 - L1MB8 LINE L1 0 6178 6093 1877 118 78 4 chr2 33901810 33902081 -219354502 + AluSx SINE Alu 1 291 -21 261 0 0 0 chr2 33902084 33902113 -219354470 + (TA)n Simple_repeat Simple_repeat 2 30 0 1169 245 136 45 chr2 33902447 33902892 -219353691 - MLT1G1 LTR MaLR -8 546 82 1979 127 38 0 chr2 33902892 33903184 -219353399 - AluSq SINE Alu -10 303 1 1169 245 136 45 chr2 33903184 33903262 -219353321 - MLT1G1 LTR MaLR -472 82 13 594 167 0 11 chr2 33903429 33903519 -219353064 - AluS SINE Alu -223 90 2 2253 106 7 3 chr2 33903679 33903980 -219352603 - AluSx SINE Alu -10 302 1 957 92 0 0 chr2 33904374 33904493 -219352090 - AluSx SINE Alu -24 286 168 690 83 0 0 chr2 33904493 33904577 -219352006 - AluSx SINE Alu -227 85 2 565 262 131 34 chr2 33905062 33905299 -219351284 - MIR SINE MIR 0 262 3 247 282 51 64 chr2 33905741 33905897 -219350686 - L1ME4a LINE L1 -14 6107 5954 1798 278 167 24 chr2 33905924 33906605 -219349978 - L2 LINE L2 -52 3261 2679 1740 213 108 16 chr2 33906605 33907033 -219349550 + MLT1C LTR MaLR 1 467 0 1798 278 167 24 chr2 33907033 33907597 -219348986 - L2 LINE L2 -634 2679 1823 295 256 84 89 chr2 33907597 33907642 -219348941 - L1ME4a LINE L1 -250 5871 5827 2302 95 6 15 chr2 33907642 33907968 -219348615 + L1MA4A LINE L1 5978 6300 -3 295 256 84 89 chr2 33907968 33908019 -219348564 - L1ME4a LINE L1 -294 5827 5777 2389 88 0 0 chr2 33908019 33908315 -219348268 - AluSc SINE Alu -13 296 1 295 256 84 89 chr2 33908315 33908408 -219348175 - L1ME4a LINE L1 -344 5777 5682 241 227 59 84 chr2 33908442 33908561 -219348022 - L1ME4a LINE L1 -509 5612 5497 2450 141 40 5 chr2 33908621 33908996 -219347587 + MLT1B LTR MaLR 3 390 0 21 36 0 0 chr2 33909081 33909109 -219347474 + AT_rich Low_complexity Low_complexity 1 28 0 307 298 39 112 chr2 33909238 33909523 -219347060 + L2 LINE L2 3007 3270 -2 249 343 133 7 chr2 33909853 33909996 -219346587 + L2 LINE L2 3111 3271 -1 236 182 0 23 chr2 33910462 33910506 -219346077 - L1ME LINE L1 -527 5594 5552 25 0 0 0 chr2 33910729 33910754 -219345829 + AT_rich Low_complexity Low_complexity 1 25 0 412 143 0 0 chr2 33912292 33912355 -219344228 - FLAM SINE Alu -11 132 70 2527 128 39 17 chr2 33912945 33913360 -219343223 - MSTA LTR MaLR -4 424 1 961 167 6 17 chr2 33913724 33913898 -219342685 - MER5B DNA MER1_type -6 172 1 25 0 0 0 chr2 33914001 33914026 -219342557 + AT_rich Low_complexity Low_complexity 1 25 0 2138 133 20 0 chr2 33914038 33914339 -219342244 + AluSx SINE Alu 1 307 -5 660 216 144 12 chr2 33914649 33914816 -219341767 - MER5A DNA MER1_type 0 189 1 2127 64 0 0 chr2 33914903 33915180 -219341403 - AluY SINE Alu 0 310 34 2084 139 7 0 chr2 33916623 33916932 -219339651 - AluSx SINE Alu -1 311 1 1536 154 53 53 chr2 33917010 33917309 -219339274 - AluJb SINE Alu -11 301 3 233 236 63 94 chr2 33917455 33917582 -219339001 + MIR3 SINE MIR 73 195 -13 26 0 0 0 chr2 33917672 33917698 -219338885 + AT_rich Low_complexity Low_complexity 1 26 0 673 269 70 18 chr2 33917808 33918035 -219338548 + MIR SINE MIR 8 246 -16 243 259 0 47 chr2 33919531 33919616 -219336967 + T-rich Low_complexity Low_complexity 5 85 0 1049 271 4 0 chr2 33919730 33919970 -219336613 - MIR SINE MIR -4 258 18 1962 190 12 0 chr2 33919973 33920304 -219336279 - MER58B DNA MER1_type -1 340 6 852 262 106 67 chr2 33921370 33921775 -219334808 - L2 LINE L2 -2 3311 2891 2483 199 95 17 chr2 33922077 33922601 -219333982 - MLT1F1 LTR MaLR -2 565 1 1025 221 86 51 chr2 33922740 33923170 -219333413 + L1MC5 LINE L1 7473 7917 -44 1132 246 117 32 chr2 33924092 33924495 -219332088 - L1ME3A LINE L1 -13 6140 5704 1709 150 13 17 chr2 33924496 33924796 -219331787 - L1MA9 LINE L1 0 6312 6014 2267 87 3 10 chr2 33924852 33925151 -219331432 + AluSc SINE Alu 1 297 -12 287 298 64 0 chr2 33925590 33925684 -219330899 - MIR SINE MIR 0 262 163 1337 101 0 0 chr2 33925685 33925854 -219330729 + AluSg SINE Alu 1 169 -141 2221 116 0 0 chr2 33926494 33926796 -219329787 + AluSx SINE Alu 3 304 -8 291 304 11 11 chr2 33926909 33927001 -219329582 - MIR SINE MIR -100 108 17 376 252 69 38 chr2 33928163 33928322 -219328261 - L1ME3A LINE L1 -2386 5405 5242 265 286 0 0 chr2 33928698 33928761 -219327822 - L2 LINE L2 0 3313 3251 26 0 0 0 chr2 33929939 33929965 -219326618 + AT_rich Low_complexity Low_complexity 1 26 0 234 260 0 0 chr2 33930387 33930437 -219326146 - L2 LINE L2 -8 3305 3256 435 226 111 69 chr2 33933335 33933424 -219323159 - L1ME3A LINE L1 -231 5939 5855 861 162 20 66 chr2 33933424 33933622 -219322961 - MER5A DNA MER1_type 0 189 1 435 226 111 69 chr2 33933622 33933754 -219322829 - L1ME3A LINE L1 -315 5855 5703 2334 100 0 0 chr2 33933754 33934055 -219322528 - AluSx SINE Alu -11 301 1 435 226 111 69 chr2 33934055 33934093 -219322490 - L1ME3A LINE L1 -467 5703 5668 448 229 132 14 chr2 33934109 33934253 -219322330 - MER112 DNA MER1_type -98 162 2 285 268 136 92 chr2 33934318 33934635 -219321948 - L1ME3A LINE L1 -1085 5044 4714 844 306 92 63 chr2 33934678 33935011 -219321572 - L1ME3A LINE L1 -5124 995 673 1699 199 0 7 chr2 33935011 33935317 -219321266 - AluJo SINE Alu -8 304 1 844 306 92 63 chr2 33935317 33935949 -219320634 - L1ME3A LINE L1 -5446 673 2 313 279 121 36 chr2 33938282 33938422 -219318161 - MIR SINE MIR -80 182 31 2369 94 3 0 chr2 33938570 33938879 -219317704 - AluSg SINE Alu 0 310 1 337 322 85 0 chr2 33938949 33939067 -219317516 - L2 LINE L2 -1 3271 3144 1324 208 33 42 chr2 33939119 33939514 -219317069 - L1ME3A LINE L1 -492 5678 5288 24183 78 3 3 chr2 33941426 33945324 -219311259 - L1PA7 LINE L1 0 6154 2241 2589 224 135 20 chr2 33946086 33946995 -219309588 + Charlie7 DNA MER1_type 1487 2500 -112 186 206 29 0 chr2 33947041 33947075 -219309508 - MIR3 SINE MIR -22 186 152 1868 147 0 17 chr2 33947128 33947427 -219309156 - AluJo SINE Alu -4 308 15 279 79 0 0 chr2 33947428 33947466 -219309117 + (T)n Simple_repeat Simple_repeat 1 38 0 350 335 13 33 chr2 33947928 33948035 -219308548 + MIR SINE MIR 5 110 -152 2299 77 32 0 chr2 33948035 33948320 -219308263 - AluSg SINE Alu -16 294 1 350 335 13 33 chr2 33948320 33948364 -219308219 + MIR SINE MIR 110 153 -109 1574 211 3 3 chr2 33948433 33948731 -219307852 + AluJo SINE Alu 2 299 -13 594 228 122 5 chr2 33949953 33950150 -219306433 - L1MC3 LINE L1 -672 7113 6894 2171 110 14 3 chr2 33950177 33950468 -219306115 - AluSx SINE Alu -18 294 1 1631 104 59 66 chr2 33950468 33950757 -219305826 - L1MC1 LINE L1 -4 6329 6043 488 127 0 0 chr2 33950759 33950838 -219305745 + pTR5 LTR ERV1 741 819 -1619 * 21573 75 5 8 chr2 33950831 33953626 -219302957 - HERV9 LTR ERV1 -4367 4032 1246 6319 94 135 75 chr2 33953825 33955291 -219301292 - pTR5 LTR ERV1 0 2438 741 240 132 0 0 chr2 33955292 33955330 -219301253 - L1MC1 LINE L1 -294 6039 6002 278 330 19 10 chr2 33955614 33955717 -219300866 - MIR3 SINE MIR -13 195 92 210 71 0 0 chr2 33957815 33957843 -219298740 + (TG)n Simple_repeat Simple_repeat 2 29 0 261 0 0 0 chr2 33957949 33957978 -219298605 + (TG)n Simple_repeat Simple_repeat 2 30 0 23 33 0 0 chr2 33958172 33958202 -219298381 + AT_rich Low_complexity Low_complexity 1 30 0 3452 224 58 28 chr2 33958632 33959974 -219296609 - L1ME2 LINE L1 -10 6154 4774 561 155 21 21 chr2 33959974 33960071 -219296512 - Tigger7 DNA MER2_type 0 2491 2395 1060 155 48 138 chr2 33960074 33960364 -219296219 - Tigger7 DNA MER2_type -2223 264 1 559 260 15 32 chr2 33960366 33960568 -219296015 - L1ME2 LINE L1 -1373 4773 4578 1771 167 98 9 chr2 33960576 33960995 -219295588 + Charlie1b DNA MER1_type 68 523 0 2007 245 84 80 chr2 33960995 33961148 -219295435 - L1ME2 LINE L1 -1566 4580 4429 2286 109 0 3 chr2 33961148 33961450 -219295133 - AluSg SINE Alu -9 301 1 2007 245 84 80 chr2 33961450 33961609 -219294974 - L1ME2 LINE L1 -1717 4429 4272 2362 244 38 10 chr2 33961609 33962113 -219294470 - LTR40a LTR ERVL 0 519 2 2007 245 84 80 chr2 33962113 33962577 -219294006 - L1ME2 LINE L1 -1874 4272 3794 1544 187 26 0 chr2 33962577 33962845 -219293738 + AluJo SINE Alu 6 280 -32 2007 245 84 80 chr2 33962845 33963210 -219293373 - L1ME2 LINE L1 -2352 3794 3432 374 265 108 32 chr2 33963316 33963501 -219293082 - L1 LINE L1 -821 5325 5127 3062 207 26 32 chr2 33963527 33964213 -219292370 + Cheshire DNA MER1_type 176 857 -1563 1593 130 8 28 chr2 33964214 33964468 -219292115 + AluJo SINE Alu 33 281 -31 3117 180 34 17 chr2 33964469 33964785 -219291798 + Cheshire DNA MER1_type 1476 1785 -635 1930 177 33 6 chr2 33964785 33965118 -219291465 - MER2 DNA MER2_type -2 342 1 3117 180 34 17 chr2 33965118 33965451 -219291132 + Cheshire DNA MER1_type 1785 2136 -284 574 139 0 0 chr2 33965476 33965562 -219291021 - L1MC/D LINE L1 -564 5678 5593 2113 165 20 28 chr2 33965562 33965957 -219290626 - L1MC1 LINE L1 0 6333 5942 1327 177 47 11 chr2 33965957 33966234 -219290349 + MER58D DNA MER1_type 100 386 0 294 296 112 8 chr2 33968131 33968256 -219288327 + MIR3 SINE MIR 34 171 -37 240 237 68 84 chr2 33968256 33968424 -219288159 - MER5A DNA MER1_type 0 189 2 849 246 94 79 chr2 33968477 33968807 -219287776 - MLT1F1 LTR MaLR -207 360 1 478 260 49 0 chr2 33968916 33969039 -219287544 - MLT1I LTR MaLR -10 399 271 448 230 0 11 chr2 33969048 33969135 -219287448 - MLT1I LTR MaLR -96 313 228 3263 139 100 129 chr2 33969178 33970056 -219286527 - MER21A LTR ERV1 -77 854 2 813 254 80 14 chr2 33970066 33970279 -219286304 - MLT1I LTR MaLR -175 234 8 2146 130 3 0 chr2 33970916 33971217 -219285366 - AluSx SINE Alu -3 309 8 2082 114 13 32 chr2 33971752 33971885 -219284698 + AluSx SINE Alu 1 135 -177 2473 74 0 3 chr2 33971885 33972194 -219284389 + AluY SINE Alu 1 308 -3 2082 114 13 32 chr2 33972194 33972391 -219284192 + AluSx SINE Alu 135 312 0 3140 131 65 48 chr2 33973381 33973839 -219282744 - LTR59 LTR ERV1 -5 592 120 2323 82 0 7 chr2 33973839 33974130 -219282453 - AluSc SINE Alu -18 291 3 3140 131 65 48 chr2 33974130 33974253 -219282330 - LTR59 LTR ERV1 -477 120 1 2678 132 44 2 chr2 33974613 33975023 -219281560 - MSTA LTR MaLR -1 427 1 1850 75 0 0 chr2 33976115 33976373 -219280210 - AluSc SINE Alu 0 339 82 195 309 41 31 chr2 33976469 33976566 -219280017 - L2 LINE L2 -44 3269 3172 2076 117 0 3 chr2 33977315 33977621 -219278962 - AluSx SINE Alu 0 309 5 1719 215 52 34 chr2 33978160 33978644 -219277939 - MER39 LTR ERV1 -1 706 1 302 322 0 0 chr2 33978644 33978731 -219277852 + (CATA)n Simple_repeat Simple_repeat 2 88 0 1687 174 116 25 chr2 33978932 33978974 -219277609 + MSTD LTR MaLR 1 38 -358 2786 83 16 16 chr2 33978974 33979349 -219277234 + THE1C LTR MaLR 1 375 0 1687 174 116 25 chr2 33979349 33979669 -219276914 + MSTD LTR MaLR 38 396 0 2129 83 83 3 chr2 33979734 33980022 -219276561 - AluY SINE Alu 0 311 1 1188 242 117 42 chr2 33982195 33982624 -219273959 + MLT1C LTR MaLR 7 467 0 643 278 90 18 chr2 33982849 33983072 -219273511 - MIR SINE MIR -16 246 8 313 209 0 30 chr2 33983354 33983421 -219273162 - MIR SINE MIR -11 251 187 30 0 0 0 chr2 33984167 33984197 -219272386 + AT_rich Low_complexity Low_complexity 1 30 0 1344 194 92 7 chr2 33984382 33984665 -219271918 - AluJo SINE Alu -5 307 1 2434 81 0 0 chr2 33985469 33985767 -219270816 + AluSg SINE Alu 1 298 -12 493 214 86 0 chr2 33985875 33985992 -219270591 + L2 LINE L2 3187 3313 0 26 30 0 0 chr2 33986111 33986144 -219270439 + AT_rich Low_complexity Low_complexity 1 33 0 2452 99 0 0 chr2 33986171 33986483 -219270100 + AluSx SINE Alu 1 312 0 1128 179 10 5 chr2 33986685 33986886 -219269697 + MER20 DNA MER1_type 18 219 0 650 313 61 4 chr2 33987768 33987991 -219268592 - MIR SINE MIR -11 251 18 221 245 0 19 chr2 33988442 33988495 -219268088 + (TG)n Simple_repeat Simple_repeat 1 52 0 249 330 43 64 chr2 33988626 33988814 -219267769 - MIR3 SINE MIR -9 199 16 193 273 0 0 chr2 33988844 33988888 -219267695 + L2 LINE L2 3226 3269 -3 197 302 139 23 chr2 33989279 33989365 -219267218 + MIR SINE MIR 71 166 -96 282 56 0 0 chr2 33989477 33989513 -219267070 + (CA)n Simple_repeat Simple_repeat 1 36 0 254 241 17 0 chr2 33990903 33990961 -219265622 + (TA)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 33991108 33991132 -219265451 + (CAT)n Simple_repeat Simple_repeat 2 25 0 25 0 0 0 chr2 33991604 33991629 -219264954 + AT_rich Low_complexity Low_complexity 1 25 0 438 246 8 23 chr2 33991699 33991821 -219264762 + MIR3 SINE MIR 68 187 -21 858 245 96 42 chr2 33992475 33993076 -219263507 + L1ME LINE L1 34 860 -5210 1567 299 31 11 chr2 33993077 33993715 -219262868 + L1ME LINE L1 972 1622 -4639 679 170 0 52 chr2 33994075 33994210 -219262373 + FLAM_A SINE Alu 14 141 -1 271 233 87 68 chr2 33994622 33994725 -219261858 - Charlie7 DNA MER1_type -2507 105 1 269 312 78 37 chr2 33994916 33995211 -219261372 - L1ME4a LINE L1 -106 6015 5709 * 355 280 104 53 chr2 33995030 33995607 -219260976 - L1MA6 LINE L1 -402 5898 5286 2041 105 10 27 chr2 33995740 33996036 -219260547 - AluSx SINE Alu -21 291 1 237 339 35 17 chr2 33996826 33996941 -219259642 - MIR3 SINE MIR -23 185 69 2825 181 57 25 chr2 33997830 33998428 -219258155 - L1MB4 LINE L1 -6 6174 5558 1050 188 24 24 chr2 33999525 33999738 -219256845 - MER20 DNA MER1_type -6 213 1 255 199 39 55 chr2 34000037 34000218 -219256365 + (TATG)n Simple_repeat Simple_repeat 1 178 0 321 173 33 53 chr2 34000251 34000401 -219256182 + (TATG)n Simple_repeat Simple_repeat 3 149 0 273 192 51 45 chr2 34000413 34000590 -219255993 + (TATG)n Simple_repeat Simple_repeat 1 178 0 262 197 41 48 chr2 34000625 34000772 -219255811 + (TATG)n Simple_repeat Simple_repeat 4 149 0 381 22 0 0 chr2 34000884 34000930 -219255653 + (TG)n Simple_repeat Simple_repeat 2 47 0 8755 115 17 52 chr2 34002456 34002739 -219253844 - Tigger1 DNA MER2_type -1 2417 2126 1956 133 14 0 chr2 34002739 34003017 -219253566 - AluSx SINE Alu -17 295 14 8755 115 17 52 chr2 34003017 34004172 -219252411 - Tigger1 DNA MER2_type -292 2126 1030 692 220 58 93 chr2 34004345 34004604 -219251979 - MER112 DNA MER1_type -3 257 8 193 250 0 0 chr2 34007149 34007193 -219249390 - MIR SINE MIR -125 137 94 960 153 0 7 chr2 34007399 34007543 -219249040 - FRAM SINE Alu -24 152 10 201 363 21 58 chr2 34010341 34010531 -219246052 + L3 LINE CR1 62 244 -1333 976 98 0 55 chr2 34011021 34011185 -219245398 - L1MB7 LINE L1 -320 5864 5710 1869 126 0 4 chr2 34011185 34011439 -219245144 - AluSx SINE Alu -59 253 1 347 179 214 0 chr2 34011537 34011621 -219244962 - MER58 DNA MER1_type -1 2419 2318 326 267 69 30 chr2 34011623 34011724 -219244859 - MER58 DNA MER1_type -110 105 1 1306 109 14 19 chr2 34012132 34012342 -219244241 + L1MB7 LINE L1 5585 5793 -391 459 185 0 0 chr2 34012342 34012434 -219244149 + (CA)n Simple_repeat Simple_repeat 1 92 0 1969 150 34 40 chr2 34012434 34012814 -219243769 + L1MB7 LINE L1 5788 6165 -19 225 83 0 0 chr2 34015488 34015524 -219241059 + (A)n Simple_repeat Simple_repeat 1 36 0 2258 92 3 7 chr2 34016850 34017154 -219239429 - AluY SINE Alu -8 303 1 231 279 15 0 chr2 34017420 34017488 -219239095 + (TATG)n Simple_repeat Simple_repeat 3 71 0 4961 74 13 11 chr2 34017488 34018123 -219238460 - L1PA14 LINE L1 -2 6159 5524 216 0 0 0 chr2 34018457 34018481 -219238102 + (T)n Simple_repeat Simple_repeat 1 24 0 327 259 36 39 chr2 34019384 34019530 -219237053 + MLT1H LTR MaLR 79 233 -182 260 267 0 0 chr2 34021055 34021115 -219235468 - MIR SINE MIR -12 250 191 22 56 0 0 chr2 34021294 34021330 -219235253 + AT_rich Low_complexity Low_complexity 1 36 0 2283 108 0 3 chr2 34021424 34021720 -219234863 + AluSx SINE Alu 1 295 -17 236 370 22 29 chr2 34022245 34022383 -219234200 + MIR SINE MIR 120 256 -6 2278 217 63 47 chr2 34022806 34022848 -219233735 - MLT1F1 LTR MaLR 0 567 527 2348 81 3 0 chr2 34022848 34023143 -219233440 + AluSg SINE Alu 1 296 -14 2278 217 63 47 chr2 34023143 34023535 -219233048 - MLT1F1 LTR MaLR -40 527 120 823 180 8 0 chr2 34023535 34023663 -219232920 - FLAM_C SINE Alu -2 131 3 2278 217 63 47 chr2 34023663 34023785 -219232798 - MLT1F1 LTR MaLR -447 120 1 22 35 0 0 chr2 34029008 34029037 -219227546 + AT_rich Low_complexity Low_complexity 1 29 0 726 182 29 53 chr2 34029702 34029872 -219226711 + MER58B DNA MER1_type 173 338 -3 978 245 94 18 chr2 34030170 34030456 -219226127 + L3 LINE CR1 1257 1564 -13 845 209 0 0 chr2 34030924 34031063 -219225520 - MER58A DNA MER1_type 0 139 1 203 265 147 59 chr2 34031063 34031199 -219225384 - MIR3 SINE MIR -13 195 48 5604 79 34 53 chr2 34031765 34032958 -219223625 - SVA Other Other -518 868 62 1184 43 0 12 chr2 34032958 34033122 -219223461 + (GGGAGA)n Simple_repeat Simple_repeat 1 162 0 5604 79 34 53 chr2 34033122 34033183 -219223400 - SVA Other Other -1324 62 1 3411 127 12 14 chr2 34033472 34033984 -219222599 + MER9 LTR ERVK 1 511 0 1122 245 61 32 chr2 34034957 34035430 -219221153 + L1M4 LINE L1 3268 3754 -2392 1695 101 4 0 chr2 34035430 34035658 -219220925 + AluSq SINE Alu 1 229 -84 233 214 54 36 chr2 34036246 34036302 -219220281 - MER2 DNA MER2_type -3 342 286 486 0 0 0 chr2 34036337 34036391 -219220192 + (TA)n Simple_repeat Simple_repeat 1 54 0 3079 12 0 0 chr2 34037496 34037834 -219218749 - L1PA2 LINE L1 -376 5779 5442 2983 12 9 3 chr2 34037827 34038167 -219218416 + L1PA2 LINE L1 5794 6135 -20 * 1040 172 82 43 chr2 34038267 34038523 -219218060 - Tigger1 DNA MER2_type -2152 266 1 716 253 62 80 chr2 34038533 34038597 -219217986 - L1MC5 LINE L1 -204 7757 7693 2095 99 17 13 chr2 34038597 34038899 -219217684 + AluSx SINE Alu 2 304 -8 716 253 62 80 chr2 34038899 34038983 -219217600 - L1MC5 LINE L1 -268 7693 7609 2253 150 84 11 chr2 34038983 34039350 -219217233 + MSTD LTR MaLR 3 396 0 716 253 62 80 chr2 34039350 34039780 -219216803 - L1MC5 LINE L1 -352 7609 7246 1164 144 6 6 chr2 34041991 34042172 -219214411 - AluSq SINE Alu -12 301 121 12520 131 36 17 chr2 34042349 34042434 -219214149 + Tigger1 DNA MER2_type 387 469 -1949 2166 78 3 7 chr2 34042434 34042747 -219213836 - AluY SINE Alu 0 312 1 12520 131 36 17 chr2 34042747 34044653 -219211930 + Tigger1 DNA MER2_type 469 2418 0 10668 31 0 0 chr2 34046593 34047869 -219208714 - L1P LINE L1 -2228 3918 2643 * 11082 27 0 0 chr2 34047865 34049142 -219207441 + L1P LINE L1 3919 5195 -951 214 213 0 21 chr2 34049735 34049782 -219206801 + T-rich Low_complexity Low_complexity 4 49 0 626 275 23 18 chr2 34051352 34051523 -219205060 + MIR3 SINE MIR 30 201 -7 955 192 88 26 chr2 34052457 34052650 -219203933 - MER58A DNA MER1_type -3 221 17 288 0 0 0 chr2 34052759 34052791 -219203792 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 245 314 66 36 chr2 34052818 34052955 -219203628 - MIR3 SINE MIR -65 143 3 2875 7 0 0 chr2 34053913 34054222 -219202361 - AluY SINE Alu -2 309 1 30 0 0 0 chr2 34055704 34055734 -219200849 + AT_rich Low_complexity Low_complexity 1 30 0 2321 82 17 3 chr2 34055734 34056028 -219200555 - AluSq SINE Alu -15 298 1 405 223 96 0 chr2 34056088 34056182 -219200401 - L2 LINE L2 -2 3311 3209 717 130 73 0 chr2 34056206 34056329 -219200254 + L1MB2 LINE L1 5839 5970 -201 1611 165 8 0 chr2 34056447 34056713 -219199870 - L1M3 LINE L1 -437 5743 5476 3034 125 31 4 chr2 34056754 34057108 -219199475 - L1PB1 LINE L1 -2 6149 5779 495 0 0 0 chr2 34057108 34057163 -219199420 + (TG)n Simple_repeat Simple_repeat 2 56 0 3034 125 31 4 chr2 34057163 34057263 -219199320 - L1PB1 LINE L1 -372 5779 5683 3233 124 8 2 chr2 34057264 34057895 -219198688 + L1PB1 LINE L1 5053 5686 -465 984 116 30 50 chr2 34057890 34058089 -219198494 - L1M3 LINE L1 -689 5491 5297 * 385 263 147 39 chr2 34058159 34058315 -219198268 + MIR3 SINE MIR 31 203 -5 469 233 81 18 chr2 34059184 34059459 -219197124 + LTR33 LTR ERVL 154 520 -1 708 280 107 36 chr2 34059737 34060063 -219196520 - L1MC4a LINE L1 -1894 5914 5553 1873 157 0 0 chr2 34060063 34060364 -219196219 + AluSx SINE Alu 1 301 0 708 280 107 36 chr2 34060364 34060429 -219196154 - L1MC4a LINE L1 -2255 5553 5494 195 42 0 0 chr2 34060432 34060456 -219196127 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1198 118 0 24 chr2 34060480 34060650 -219195933 - AluSg SINE Alu -144 166 1 734 192 51 6 chr2 34060757 34060913 -219195670 - MER20 DNA MER1_type 0 219 57 21 0 0 0 chr2 34061059 34061080 -219195503 + AT_rich Low_complexity Low_complexity 1 21 0 655 248 38 17 chr2 34061312 34061548 -219195035 - MIR SINE MIR 0 262 22 345 145 65 0 chr2 34061778 34061840 -219194743 + MIR SINE MIR 126 191 -71 555 228 83 21 chr2 34062737 34062882 -219193701 - MIR3 SINE MIR -21 187 34 2166 121 20 3 chr2 34063143 34063449 -219193134 + AluSq SINE Alu 1 311 -2 9505 28 4 0 chr2 34064185 34066043 -219190540 + L1PA3 LINE L1 4292 6152 -3 21 57 0 0 chr2 34066043 34066078 -219190505 + AT_rich Low_complexity Low_complexity 1 35 0 2268 85 3 0 chr2 34066108 34066402 -219190181 - AluY SINE Alu -16 295 1 21 0 0 0 chr2 34066411 34066432 -219190151 + AT_rich Low_complexity Low_complexity 1 21 0 836 282 45 20 chr2 34066786 34067031 -219189552 - MIR SINE MIR -4 258 8 248 222 153 0 chr2 34067088 34067160 -219189423 + L2 LINE L2 3188 3270 -2 310 268 79 79 chr2 34067160 34067245 -219189338 + L1ME LINE L1 5655 5742 -379 1967 146 0 56 chr2 34067245 34067568 -219189015 + AluSx SINE Alu 1 305 -7 310 268 79 79 chr2 34067568 34067646 -219188937 + L1ME LINE L1 5741 5818 -303 212 345 0 12 chr2 34067904 34067988 -219188595 - MIR3 SINE MIR -16 192 110 833 165 0 0 chr2 34068785 34068918 -219187665 - FLAM_C SINE Alu 0 133 1 1371 125 60 0 chr2 34068969 34069185 -219187398 - MER30 DNA MER1_type 0 230 2 397 353 55 5 chr2 34069820 34070038 -219186545 + L2 LINE L2 2837 3065 -248 1890 149 7 13 chr2 34070332 34070633 -219185950 - AluSx SINE Alu -13 299 1 2438 80 0 0 chr2 34072257 34072557 -219184026 + AluY SINE Alu 1 300 -11 336 24 0 0 chr2 34072564 34072576 -219184007 + (CA)n Simple_repeat Simple_repeat 1 53 0 336 24 0 0 chr2 34072576 34072617 -219183966 + (CA)n Simple_repeat Simple_repeat 2 42 0 1264 180 144 8 chr2 34072694 34073089 -219183494 - Tigger6 DNA MER2_type -72 1525 1077 * 2335 184 5 2 chr2 34073086 34073521 -219183062 - Tigger6 DNA MER2_type -1161 436 1 195 102 41 102 chr2 34073672 34073721 -219182862 + L2 LINE L2 2448 2493 -821 192 383 90 31 chr2 34073872 34074360 -219182223 + L2 LINE L2 2458 2974 -340 361 324 64 73 chr2 34074685 34075093 -219181490 - L2 LINE L2 -42 3230 2827 594 312 205 29 chr2 34075206 34075860 -219180723 - L2 LINE L2 -916 2398 1630 737 59 29 0 chr2 34076137 34076239 -219180344 - L1MA2 LINE L1 0 6304 6200 242 333 0 0 chr2 34076240 34076297 -219180286 - L2 LINE L2 -12 3301 3245 224 295 48 57 chr2 34077227 34077332 -219179251 - L2 LINE L2 -37 3235 3132 268 265 193 0 chr2 34077376 34077459 -219179124 + MIR3 SINE MIR 99 197 -11 2361 84 0 19 chr2 34078015 34078324 -219178259 + AluSq SINE Alu 1 303 -10 1890 135 11 0 chr2 34078760 34079042 -219177541 - AluSx SINE Alu -27 285 1 368 359 38 5 chr2 34079877 34080061 -219176522 + MIR SINE MIR 30 219 -43 2041 120 3 32 chr2 34080113 34080429 -219176154 - AluSg1 SINE Alu -2 307 1 23 0 0 0 chr2 34080572 34080595 -219175988 + AT_rich Low_complexity Low_complexity 1 23 0 1696 160 10 14 chr2 34081852 34082145 -219174438 - AluJb SINE Alu -20 292 1 372 231 22 22 chr2 34082343 34082477 -219174106 + L1MA4A LINE L1 5989 6122 -181 371 239 11 0 chr2 34082480 34082572 -219174011 + L1MA4A LINE L1 6188 6280 -23 2510 84 0 3 chr2 34082935 34083246 -219173337 + AluSg SINE Alu 1 310 0 221 329 88 52 chr2 34083976 34084283 -219172300 - L2 LINE L2 -554 2760 2443 418 337 73 11 chr2 34084314 34084492 -219172091 - MIR3 SINE MIR -2 206 18 306 307 8 63 chr2 34086243 34086370 -219170213 - L2 LINE L2 -14 3299 3180 1873 142 3 63 chr2 34086963 34087295 -219169288 + AluJo SINE Alu 1 312 0 32021 35 2 3 chr2 34088879 34092956 -219163627 + L1PA3 LINE L1 1 4076 -2070 4844 31 0 2 chr2 34093056 34093632 -219162951 + L1PA3 LINE L1 5581 6155 0 351 0 0 0 chr2 34094013 34094052 -219162531 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 34096225 34096248 -219160335 + AT_rich Low_complexity Low_complexity 1 23 0 241 290 87 22 chr2 34096346 34096484 -219160099 + MARNA DNA Mariner 354 500 -86 1116 162 0 12 chr2 34096561 34096734 -219159849 - FRAM SINE Alu -5 171 1 266 299 28 28 chr2 34096921 34097028 -219159555 + MIR3 SINE MIR 92 198 -10 24 0 0 0 chr2 34097271 34097295 -219159288 + AT_rich Low_complexity Low_complexity 1 24 0 1094 245 45 48 chr2 34097684 34098059 -219158524 + MLT1B LTR MaLR 1 374 -16 2475 66 3 0 chr2 34098449 34098751 -219157832 + AluY SINE Alu 1 303 -8 218 386 95 16 chr2 34100680 34100855 -219155728 - MIR3 SINE MIR -3 205 13 2386 72 0 16 chr2 34100855 34101162 -219155421 - AluSx SINE Alu -10 302 1 218 386 95 16 chr2 34101162 34101175 -219155408 - MIR3 SINE MIR -195 13 2 309 360 47 0 chr2 34101846 34101996 -219154587 - MIR SINE MIR -53 209 53 23 33 0 0 chr2 34103024 34103054 -219153529 + AT_rich Low_complexity Low_complexity 1 30 0 371 308 103 14 chr2 34103277 34103423 -219153160 + MER91A DNA MER1_type 22 180 -16 321 292 84 26 chr2 34103450 34103604 -219152979 - MIR3 SINE MIR -45 163 1 180 229 115 16 chr2 34103737 34103798 -219152785 - L3 LINE CR1 -77 1500 1434 235 311 250 22 chr2 34104508 34104712 -219151871 - L3 LINE CR1 -6 1571 1415 1170 204 22 0 chr2 34104712 34104943 -219151640 + MER46A DNA MER2_type 1 236 0 235 311 250 22 chr2 34104943 34105098 -219151485 - L3 LINE CR1 -162 1415 1130 186 43 0 0 chr2 34107129 34107152 -219149431 + (TAA)n Simple_repeat Simple_repeat 3 25 0 254 362 190 9 chr2 34107155 34107376 -219149207 - MIR SINE MIR 0 262 2 2293 88 10 3 chr2 34107695 34108001 -219148582 - AluSc SINE Alu -1 308 1 2243 114 0 0 chr2 34110388 34110685 -219145898 - AluSq SINE Alu -16 297 1 197 286 0 20 chr2 34111417 34111466 -219145117 + MIR SINE MIR 32 79 -183 232 277 130 57 chr2 34113163 34113340 -219143243 - MIR SINE MIR -20 242 53 362 250 125 8 chr2 34113592 34113712 -219142871 + MER94 DNA DNA 1 134 0 375 320 125 0 chr2 34114696 34114824 -219141759 - MIR3 SINE MIR -33 175 32 285 289 280 18 chr2 34115644 34115862 -219140721 + L3 LINE CR1 978 1252 -325 450 376 9 19 chr2 34116041 34116254 -219140329 - L3 LINE CR1 0 1577 1367 451 273 125 31 chr2 34116492 34116917 -219139666 - L1MEd LINE L1 -2567 3815 3351 3141 119 80 16 chr2 34117111 34117322 -219139261 - L1MA5A LINE L1 0 6297 6101 2074 125 57 20 chr2 34117322 34117673 -219138910 - THE1B LTR MaLR 0 364 1 3141 119 80 16 chr2 34117673 34118024 -219138559 - L1MA5A LINE L1 -196 6101 5699 302 194 21 21 chr2 34118046 34118139 -219138444 - L1MEd LINE L1 -3235 3147 3055 338 210 21 61 chr2 34118177 34118335 -219138248 - L1MEd LINE L1 -3882 2500 2376 787 217 82 98 chr2 34118342 34118835 -219137748 - MER66A LTR ERV1 -12 487 100 1932 143 34 0 chr2 34119019 34119312 -219137271 - AluSx SINE Alu -9 303 1 2356 85 7 7 chr2 34119785 34120090 -219136493 - AluSc SINE Alu -4 305 1 570 290 48 35 chr2 34120260 34120491 -219136092 - MIR SINE MIR -26 236 3 554 260 136 6 chr2 34120503 34120680 -219135903 - MIR SINE MIR -6 256 57 2274 113 0 3 chr2 34120686 34120987 -219135596 - AluSc SINE Alu -9 300 1 1946 147 3 17 chr2 34121176 34121475 -219135108 + AluJo SINE Alu 1 295 -17 211 211 0 0 chr2 34121475 34121513 -219135070 + GA-rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr2 34121553 34121576 -219135007 + AT_rich Low_complexity Low_complexity 1 23 0 2078 169 8 72 chr2 34123866 34124363 -219132220 - MER31B LTR ERV1 0 466 2 413 161 22 3 chr2 34124599 34124738 -219131845 - MER53 DNA DNA -3 186 8 274 262 132 16 chr2 34124795 34125141 -219131442 - L1MEd LINE L1 -4730 1833 1290 480 311 67 18 chr2 34125173 34125398 -219131185 - L1MEd LINE L1 -5020 1352 1117 221 186 51 0 chr2 34125803 34125862 -219130721 + (TTTA)n Simple_repeat Simple_repeat 4 65 0 189 74 0 0 chr2 34125943 34125970 -219130613 + (TG)n Simple_repeat Simple_repeat 2 28 0 231 122 0 41 chr2 34126039 34126088 -219130495 - L1ME LINE L1 -248 5916 5870 301 119 0 0 chr2 34126351 34126393 -219130190 - 5S rRNA rRNA -79 42 1 3118 69 2 0 chr2 34126393 34126830 -219129753 + L1PA7 LINE L1 4323 4760 -1386 7234 46 3 4 chr2 34126833 34128050 -219128533 + L1PA7 LINE L1 4936 6151 -3 372 235 66 7 chr2 34129444 34129580 -219127003 - Charlie2a DNA MER1_type 0 2862 2719 * 485 219 55 7 chr2 34129578 34129724 -219126859 - Charlie2a DNA MER1_type -1189 1673 1521 628 278 36 46 chr2 34129748 34130050 -219126533 - Charlie2a DNA MER1_type -2466 316 18 445 331 26 0 chr2 34130545 34130696 -219125887 - MIR3 SINE MIR -9 199 45 249 136 0 0 chr2 34131062 34131106 -219125477 + MER116 DNA Mariner 1 44 -36 1921 118 0 51 chr2 34131642 34131974 -219124609 + AluSx SINE Alu 1 317 0 528 229 13 51 chr2 34132630 34132678 -219123905 + L1ME3 LINE L1 5996 6044 -118 2623 52 0 0 chr2 34132678 34132985 -219123598 - AluY SINE Alu -4 307 1 528 229 13 51 chr2 34132985 34133093 -219123490 + L1ME3 LINE L1 6044 6146 -16 191 285 93 65 chr2 34134976 34135299 -219121284 + L2 LINE L2 2155 2486 -828 364 300 109 9 chr2 34136037 34136147 -219120436 + L2 LINE L2 3189 3309 -4 339 208 188 0 chr2 34137303 34137399 -219119184 - FLAM_A SINE Alu -7 126 13 258 32 0 0 chr2 34137518 34137549 -219119034 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 2176 127 0 3 chr2 34137549 34137837 -219118746 - AluSp SINE Alu -24 289 1 321 68 0 0 chr2 34139121 34139165 -219117418 + (CA)n Simple_repeat Simple_repeat 1 44 0 360 308 101 13 chr2 34139924 34140083 -219116500 - MIR SINE MIR -69 193 21 1104 203 33 0 chr2 34140087 34140299 -219116284 + MER58A DNA MER1_type 1 219 -5 691 204 188 6 chr2 34140312 34140488 -219116095 + MER3 DNA MER1_type 2 209 0 831 310 16 4 chr2 34140851 34141096 -219115487 - MIR SINE MIR 0 262 15 2452 80 0 0 chr2 34141244 34141544 -219115039 - AluSx SINE Alu -12 300 1 565 55 44 22 chr2 34141890 34141981 -219114602 - MER85 DNA T2_type 0 139 47 396 0 0 0 chr2 34141981 34142025 -219114558 + (CA)n Simple_repeat Simple_repeat 1 44 0 2623 129 2 19 chr2 34142987 34143413 -219113170 + L1M2 LINE L1 2 420 -6429 3365 163 47 2 chr2 34143416 34144016 -219112567 + L1M2 LINE L1 970 1596 -5253 2394 61 3 23 chr2 34144033 34144343 -219112240 + AluY SINE Alu 1 304 -7 214 301 60 48 chr2 34144521 34144604 -219111979 + L2 LINE L2 3189 3272 -41 2121 75 39 14 chr2 34146537 34146816 -219109767 - AluY SINE Alu -4 307 22 27 0 0 0 chr2 34146953 34146980 -219109603 + AT_rich Low_complexity Low_complexity 1 27 0 189 0 0 0 chr2 34147205 34147226 -219109357 + (T)n Simple_repeat Simple_repeat 1 21 0 964 175 0 5 chr2 34147256 34147445 -219109138 - L1PA4 LINE L1 -2 6153 5966 1074 15 8 0 chr2 34147952 34148084 -219108499 + L1P1 LINE L1 5647 5779 -376 524 192 10 20 chr2 34149294 34149393 -219107190 - MER2 DNA MER2_type -246 99 2 446 193 23 0 chr2 34150016 34150104 -219106479 - MER20 DNA MER1_type 0 219 130 358 306 45 22 chr2 34150378 34150512 -219106071 - MIR3 SINE MIR -15 193 57 404 319 15 7 chr2 34152167 34152302 -219104281 - L2 LINE L2 0 3313 3178 186 43 0 0 chr2 34154960 34154983 -219101600 + (T)n Simple_repeat Simple_repeat 1 23 0 2412 83 0 3 chr2 34156094 34156395 -219100188 + AluSc SINE Alu 1 300 -9 2371 102 0 3 chr2 34156396 34156700 -219099883 + AluY SINE Alu 1 303 -8 816 295 115 28 chr2 34156930 34157190 -219099393 + L1ME4a LINE L1 5258 5494 -627 2398 178 73 24 chr2 34157190 34157685 -219098898 - MLT2B1 LTR ERVL -1 519 1 816 295 115 28 chr2 34157685 34158217 -219098366 + L1ME4a LINE L1 5494 6119 -2 6283 173 118 36 chr2 34158419 34159840 -219096743 + MER52A LTR ERV1 219 1755 0 306 0 0 0 chr2 34161515 34161549 -219095034 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 254 136 0 0 chr2 34162379 34162423 -219094160 - AluSq SINE Alu -2 300 257 1410 105 14 29 chr2 34162423 34162633 -219093950 - AluSq SINE Alu -106 207 1 2427 64 0 3 chr2 34162733 34163028 -219093555 + AluY SINE Alu 13 306 -5 664 275 70 18 chr2 34164923 34165185 -219091398 - MIR SINE MIR 0 262 4 468 302 34 42 chr2 34166944 34167241 -219089342 - L3 LINE CR1 -3 1574 1230 2341 84 7 0 chr2 34167805 34168101 -219088482 + AluSp SINE Alu 1 298 -15 1960 153 0 0 chr2 34168967 34169249 -219087334 + AluSx SINE Alu 1 282 -30 213 39 0 0 chr2 34169252 34169278 -219087305 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 188 315 83 19 chr2 34169815 34169923 -219086660 + MIR SINE MIR 70 184 -78 2432 74 7 10 chr2 34170148 34170530 -219086053 - AluY SINE Alu 0 381 1 1730 161 13 13 chr2 34173185 34173484 -219083099 + AluJo SINE Alu 1 299 -13 381 304 145 50 chr2 34173495 34173960 -219082623 - L2 LINE L2 -32 3240 2736 261 83 0 0 chr2 34174453 34174489 -219082094 + (TA)n Simple_repeat Simple_repeat 1 36 0 356 217 60 12 chr2 34175099 34175182 -219081401 - L2 LINE L2 0 3313 3227 2452 69 0 0 chr2 34175182 34175471 -219081112 + AluSc SINE Alu 1 289 -20 790 188 0 36 chr2 34175646 34175784 -219080799 - FLAM_A SINE Alu 0 133 1 1907 234 107 48 chr2 34176260 34177207 -219079376 + L1ME3A LINE L1 2559 3561 -2585 271 296 79 46 chr2 34177217 34177369 -219079214 + MLT1J LTR MaLR 295 451 -60 3270 279 54 16 chr2 34177370 34178673 -219077910 + L1ME3A LINE L1 3840 5191 -955 2110 263 80 21 chr2 34178726 34179285 -219077298 + L1ME3A LINE L1 5352 5967 -203 2163 123 31 47 chr2 34179285 34179666 -219076917 + THE1C LTR MaLR 1 375 0 2110 263 80 21 chr2 34179666 34179854 -219076729 + L1ME3A LINE L1 5967 6143 -27 2125 113 7 3 chr2 34179854 34180179 -219076404 - AluSg SINE Alu 0 310 1 1755 130 47 18 chr2 34181087 34181395 -219075188 + AluSg SINE Alu 1 316 0 2206 102 0 20 chr2 34183035 34183340 -219073243 + AluSc SINE Alu 1 299 -10 1273 164 86 112 chr2 34183525 34183630 -219072953 - MER44D DNA MER2_type -1882 609 503 267 31 0 0 chr2 34183630 34183662 -219072921 + (CATA)n Simple_repeat Simple_repeat 2 33 0 1273 164 86 112 chr2 34183662 34183904 -219072679 - MER44D DNA MER2_type -1988 503 1 449 277 196 18 chr2 34183940 34184160 -219072423 - MIR SINE MIR 0 262 4 244 209 0 0 chr2 34184352 34184395 -219072188 + Tigger5 DNA MER2_type 1 43 -2280 1478 160 95 90 chr2 34184587 34184684 -219071899 + L1MB4 LINE L1 5767 5862 -318 2199 99 0 63 chr2 34184684 34185017 -219071566 + AluSx SINE Alu 1 312 0 1478 160 95 90 chr2 34185017 34185331 -219071252 + L1MB4 LINE L1 5862 6180 0 697 191 37 133 chr2 34186396 34186473 -219070110 - MER20 DNA MER1_type 0 219 136 2622 44 0 19 chr2 34186473 34186790 -219069793 - AluY SINE Alu 0 311 1 697 191 37 133 chr2 34186790 34186953 -219069630 - MER20 DNA MER1_type -83 136 2 359 283 145 6 chr2 34188271 34188430 -219068153 + MER5A DNA MER1_type 9 189 0 254 326 30 55 chr2 34188441 34188619 -219067964 - MER5B DNA MER1_type -3 186 1 2194 132 140 31 chr2 34188791 34189177 -219067406 + MSTA LTR MaLR 1 428 0 185 375 31 10 chr2 34191788 34191884 -219064699 - MIR SINE MIR -67 141 44 319 305 78 14 chr2 34192337 34192478 -219064105 - L2 LINE L2 -4 3309 3160 2169 77 0 24 chr2 34193365 34193663 -219062920 + AluY SINE Alu 1 291 -20 318 218 34 88 chr2 34194026 34194173 -219062410 + L2 LINE L2 3001 3139 -174 1850 103 7 18 chr2 34194669 34194950 -219061633 - AluY SINE Alu -33 278 1 2541 64 0 10 chr2 34196448 34196460 -219060123 - AluY SINE Alu -1 310 299 225 65 0 0 chr2 34196460 34196491 -219060092 + (TA)n Simple_repeat Simple_repeat 1 31 0 2541 64 0 10 chr2 34196491 34196791 -219059792 - AluY SINE Alu -12 299 1 216 235 20 0 chr2 34197289 34197340 -219059243 + L2 LINE L2 1765 1816 -1498 262 309 36 0 chr2 34197391 34197475 -219059108 + MIR SINE MIR 146 232 -30 216 0 0 0 chr2 34197839 34197863 -219058720 + (TG)n Simple_repeat Simple_repeat 2 25 0 292 311 108 7 chr2 34198792 34198940 -219057643 + MIR SINE MIR 20 182 -80 280 267 57 80 chr2 34199374 34199550 -219057033 + MER104 DNA Tc2 4 175 -5 2053 173 11 11 chr2 34199564 34199929 -219056654 - L1PB4 LINE L1 0 6156 5792 237 189 54 27 chr2 34200059 34200133 -219056450 + L1MC/D LINE L1 5741 5816 -1992 2176 80 31 7 chr2 34200145 34200433 -219056150 + AluY SINE Alu 1 295 -16 764 65 74 9 chr2 34200445 34200553 -219056030 + L1P5 LINE L1 5545 5659 -497 900 141 0 0 chr2 34200555 34200690 -219055893 - L1PB4 LINE L1 -383 5773 5639 1886 157 0 0 chr2 34200812 34201105 -219055478 + AluJb SINE Alu 6 298 -14 1398 232 304 8 chr2 34201492 34202091 -219054492 - LTR50 LTR ERVL -2 793 18 809 261 141 70 chr2 34202473 34202991 -219053592 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34203766 34204067 -219052516 + AluSx SINE Alu 1 301 -11 2092 171 49 0 chr2 34204630 34204976 -219051607 + MLT1A1 LTR MaLR 3 365 0 2267 62 10 40 chr2 34205015 34205319 -219051264 + AluY SINE Alu 1 295 -16 1587 231 52 30 chr2 34205666 34206107 -219050476 - MLT1C LTR MaLR -12 455 5 327 294 96 7 chr2 34206648 34206784 -219049799 + MIR SINE MIR 87 234 -28 2343 97 0 3 chr2 34206906 34207214 -219049369 - AluSq SINE Alu -4 309 3 2287 104 3 0 chr2 34207312 34207620 -219048963 - AluSg SINE Alu -1 309 1 608 124 11 0 chr2 34207672 34207761 -219048822 - 5S rRNA rRNA -31 90 1 3619 38 0 5 chr2 34208546 34208966 -219047617 + L1PA4 LINE L1 5735 6152 -3 243 0 0 0 chr2 34208970 34208997 -219047586 + (CAA)n Simple_repeat Simple_repeat 2 28 0 239 367 163 0 chr2 34209091 34209238 -219047345 - MIR SINE MIR -71 191 21 249 353 34 78 chr2 34210290 34210447 -219046136 + L3 LINE CR1 51 199 -1378 2370 81 10 3 chr2 34210447 34210754 -219045829 + AluY SINE Alu 1 309 -2 249 353 34 78 chr2 34210754 34210800 -219045783 + L3 LINE CR1 199 245 -1332 544 161 35 0 chr2 34211068 34211155 -219045428 + 5S rRNA rRNA 1 90 -31 180 352 0 0 chr2 34211218 34211289 -219045294 - L2 LINE L2 -525 2789 2719 240 239 33 103 chr2 34211290 34211474 -219045109 + MER104 DNA Tc2 1 171 -9 1629 324 88 21 chr2 34211521 34212428 -219044155 - L2 LINE L2 -627 2687 1720 402 314 154 33 chr2 34212496 34212795 -219043788 - L2 LINE L2 -556 2758 2424 1510 139 12 148 chr2 34212959 34213296 -219043287 + AluJb SINE Alu 1 291 -11 558 251 6 9 chr2 34214539 34214679 -219041904 + MIR3 SINE MIR 32 175 -33 2384 78 3 0 chr2 34217819 34218112 -219038471 - AluSp SINE Alu -19 294 1 1617 70 0 5 chr2 34218247 34218448 -219038135 + AluY SINE Alu 105 304 -7 195 42 0 0 chr2 34218833 34218857 -219037726 + (GGA)n Simple_repeat Simple_repeat 2 25 0 858 140 140 35 chr2 34219629 34219800 -219036783 - AluSg/x SINE Alu -16 296 108 572 279 135 5 chr2 34220030 34220238 -219036345 + MIR SINE MIR 9 243 -19 309 267 99 38 chr2 34220418 34220549 -219036034 - MER5A DNA MER1_type 0 189 51 189 0 0 0 chr2 34220551 34220572 -219036011 + (CTG)n Simple_repeat Simple_repeat 2 22 0 1265 143 135 8 chr2 34221835 34222072 -219034511 + Tigger7 DNA MER2_type 1 267 -466 570 157 11 0 chr2 34222077 34222166 -219034417 + Tigger7 DNA MER2_type 2397 2486 -1 377 290 73 0 chr2 34222169 34222293 -219034290 - MIR SINE MIR -117 145 13 1950 134 36 0 chr2 34222658 34222934 -219033649 + AluSx SINE Alu 3 288 -24 223 129 0 0 chr2 34223811 34223842 -219032741 - L2 LINE L2 -18 3295 3265 2141 115 10 0 chr2 34224737 34225033 -219031550 + AluSx SINE Alu 1 299 -13 2279 47 0 50 chr2 34225583 34225906 -219030677 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34227160 34227181 -219029402 + AT_rich Low_complexity Low_complexity 1 21 0 1513 136 182 25 chr2 34227762 34228086 -219028497 - THE1C LTR MaLR 0 375 1 351 0 0 0 chr2 34228247 34228286 -219028297 + (TG)n Simple_repeat Simple_repeat 2 40 0 2088 120 0 19 chr2 34228286 34228594 -219027989 - AluSx SINE Alu -9 303 2 266 75 0 25 chr2 34229222 34229262 -219027321 + MADE1 DNA Mariner 2 40 -40 2347 106 0 3 chr2 34229262 34229574 -219027009 - AluY SINE Alu 0 311 1 2198 110 3 3 chr2 34230359 34230658 -219025925 + AluSx SINE Alu 1 299 -13 909 163 0 96 chr2 34231548 34231757 -219024826 - MER53 DNA DNA 0 189 1 543 273 58 11 chr2 34232304 34232502 -219024081 - MIR SINE MIR 0 262 52 585 241 50 87 chr2 34232835 34232968 -219023615 - L1MA9 LINE L1 -123 6189 6053 1856 162 7 3 chr2 34232968 34233270 -219023313 - AluJb SINE Alu -9 303 1 585 241 50 87 chr2 34233270 34233435 -219023148 - L1MA9 LINE L1 -259 6053 5902 672 198 144 82 chr2 34233948 34234246 -219022337 + L1ME4a LINE L1 5709 6038 -83 1632 93 0 0 chr2 34234246 34234451 -219022132 + AluSg/x SINE Alu 85 289 -21 672 198 144 82 chr2 34234451 34234541 -219022042 + L1ME4a LINE L1 6038 6121 0 597 389 29 3 chr2 34234863 34235169 -219021414 + L3 LINE CR1 229 542 -1035 1485 179 42 45 chr2 34235305 34235617 -219020966 - AluJo SINE Alu -1 311 1 1554 209 138 20 chr2 34235870 34236277 -219020306 - MSTB2 LTR MaLR -2 455 1 458 293 176 55 chr2 34236392 34236863 -219019720 - L2 LINE L2 -547 2767 2240 583 267 128 15 chr2 34238332 34238527 -219018056 + MIR SINE MIR 46 262 0 609 81 35 0 chr2 34239516 34239603 -219016980 + L1MB8 LINE L1 6077 6166 -12 316 248 28 62 chr2 34239729 34239874 -219016709 - L1ME4a LINE L1 -209 5912 5773 1342 117 0 0 chr2 34239948 34240127 -219016456 - AluSg/x SINE Alu -2 310 132 210 37 0 0 chr2 34240127 34240154 -219016429 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1948 125 0 4 chr2 34240160 34240439 -219016144 - AluSx SINE Alu -23 289 12 2399 97 0 0 chr2 34240526 34240826 -219015757 - AluSg SINE Alu -9 301 2 438 130 0 98 chr2 34240856 34240948 -219015635 - L1MA5A LINE L1 0 6297 6215 21 0 0 0 chr2 34240983 34241004 -219015579 + AT_rich Low_complexity Low_complexity 1 21 0 27 73 0 0 chr2 34241062 34241117 -219015466 + AT_rich Low_complexity Low_complexity 1 55 0 1870 110 0 4 chr2 34241225 34241471 -219015112 + AluSx SINE Alu 32 276 -36 219 69 0 0 chr2 34241484 34241513 -219015070 + (TAA)n Simple_repeat Simple_repeat 2 30 0 247 364 45 0 chr2 34242412 34242500 -219014083 + MIR3 SINE MIR 65 156 -52 482 258 26 53 chr2 34242708 34242859 -219013724 + MIR SINE MIR 54 200 -62 416 289 107 13 chr2 34242962 34243121 -219013462 - L2 LINE L2 -185 3087 2914 291 282 35 0 chr2 34243230 34243315 -219013268 - MIR SINE MIR -62 200 113 2040 113 22 0 chr2 34243350 34243674 -219012909 - AluSg SINE Alu 0 330 1 230 0 0 32 chr2 34243683 34243714 -219012869 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1416 182 91 3 chr2 34243714 34244010 -219012573 - L1MD3 LINE L1 -170 7825 7504 2025 75 120 0 chr2 34244944 34245210 -219011373 + AluSc SINE Alu 1 298 -1 209 268 0 0 chr2 34245443 34245499 -219011084 - MIR SINE MIR -50 212 157 293 252 75 101 chr2 34247616 34247775 -219008808 - MIR3 SINE MIR -7 201 47 274 188 58 14 chr2 34248548 34248617 -219007966 + L1ME LINE L1 5532 5603 -518 1025 111 12 25 chr2 34248860 34249022 -219007561 + AluSx SINE Alu 1 160 -152 471 48 0 0 chr2 34249030 34249092 -219007491 + (CA)n Simple_repeat Simple_repeat 2 63 0 2326 107 3 53 chr2 34249300 34249427 -219007156 - MER1B DNA MER1_type -2373 337 205 2440 73 3 3 chr2 34249427 34249729 -219006854 - AluY SINE Alu -9 302 1 2326 107 3 53 chr2 34249729 34249956 -219006627 - MER1B DNA MER1_type -2505 205 1 681 246 67 88 chr2 34250982 34251111 -219005472 - L2 LINE L2 -14 3299 3169 1978 118 0 44 chr2 34251111 34251407 -219005176 + AluSc SINE Alu 1 283 -26 681 246 67 88 chr2 34251407 34251562 -219005021 - L2 LINE L2 -144 3169 3021 1034 245 107 15 chr2 34251668 34252044 -219004539 - L2 LINE L2 -983 2331 1863 2337 97 0 0 chr2 34252367 34252667 -219003916 + AluSx SINE Alu 1 300 -12 2360 78 3 0 chr2 34252887 34253180 -219003403 + AluSc SINE Alu 1 294 -15 1599 204 250 23 chr2 34253236 34253764 -219002819 + L1ME2 LINE L1 5508 6155 -9 21 57 0 0 chr2 34254417 34254452 -219002131 + AT_rich Low_complexity Low_complexity 1 35 0 2254 108 7 0 chr2 34255080 34255377 -219001206 + AluSx SINE Alu 1 299 -13 2068 115 3 7 chr2 34256030 34256326 -219000257 - AluSg SINE Alu -15 295 1 422 295 127 34 chr2 34256488 34256725 -218999858 - MIR SINE MIR 0 262 4 1510 182 11 7 chr2 34260348 34260634 -218995949 + AluJo SINE Alu 1 287 -25 213 333 178 67 chr2 34260712 34260892 -218995691 - L2 LINE L2 0 3272 3073 405 169 39 0 chr2 34260970 34261047 -218995536 - MER116 DNA Mariner 0 80 1 1903 138 31 3 chr2 34261744 34262035 -218994548 + AluSq SINE Alu 1 299 -14 1354 166 4 53 chr2 34264044 34264291 -218992292 + MER46A DNA MER2_type 2 236 0 271 303 193 0 chr2 34264428 34264537 -218992046 - L2 LINE L2 0 3313 3184 1295 136 14 47 chr2 34264979 34265193 -218991390 + AluJo SINE Alu 87 293 -19 2387 94 0 0 chr2 34265196 34265495 -218991088 + AluSq SINE Alu 1 299 -14 423 291 151 48 chr2 34266012 34266166 -218990417 - L2 LINE L2 0 3313 3176 1959 129 9 55 chr2 34266166 34266492 -218990091 + AluSx SINE Alu 1 311 -1 423 291 151 48 chr2 34266492 34266588 -218989995 - L2 LINE L2 -137 3176 3037 764 202 90 56 chr2 34266784 34267017 -218989566 + L1MC1 LINE L1 6093 6333 0 399 213 37 28 chr2 34268654 34268762 -218987821 - MIR SINE MIR -4 258 150 1818 113 94 50 chr2 34269116 34269435 -218987148 - MER47A DNA MER2_type 0 366 34 771 142 9 0 chr2 34269436 34269549 -218987034 + AluSq/x SINE Alu 3 116 -196 22 35 0 0 chr2 34270122 34270151 -218986432 + AT_rich Low_complexity Low_complexity 1 29 0 1736 169 3 29 chr2 34270573 34270881 -218985702 + AluJo SINE Alu 1 300 -12 348 309 92 94 chr2 34271824 34272280 -218984303 + L2 LINE L2 2809 3263 -9 190 262 71 71 chr2 34272509 34272593 -218983990 - L2 LINE L2 0 3272 3189 365 305 67 70 chr2 34272595 34272880 -218983703 + L2 LINE L2 2985 3268 -4 2305 101 0 3 chr2 34273854 34274152 -218982431 + AluSx SINE Alu 1 297 -15 2499 59 0 7 chr2 34274287 34274594 -218981989 + AluY SINE Alu 1 305 -6 208 219 0 0 chr2 34275155 34275196 -218981387 + L3 LINE CR1 1523 1563 -14 1890 121 38 0 chr2 34276622 34276911 -218979672 + AluSx SINE Alu 1 300 -12 515 280 89 52 chr2 34277748 34278019 -218978564 + L3 LINE CR1 1294 1574 -3 22 0 0 0 chr2 34278432 34278454 -218978129 + AT_rich Low_complexity Low_complexity 1 22 0 447 297 7 71 chr2 34278662 34278817 -218977766 - MIR3 SINE MIR -28 180 36 603 343 99 33 chr2 34279125 34279574 -218977009 + L2 LINE L2 1924 2342 -972 189 0 0 0 chr2 34279574 34279595 -218976988 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2264 100 0 0 chr2 34279598 34279879 -218976704 - AluSg SINE Alu -25 285 5 603 343 99 33 chr2 34279879 34280162 -218976421 + L2 LINE L2 2343 2709 -605 2104 146 0 0 chr2 34280420 34280729 -218975854 - AluSx SINE Alu 0 312 4 216 310 69 0 chr2 34280921 34280979 -218975604 + L2 LINE L2 3207 3268 -4 23 54 0 0 chr2 34281048 34281085 -218975498 + AT_rich Low_complexity Low_complexity 1 37 0 2432 63 0 13 chr2 34281314 34281616 -218974967 - AluY SINE Alu -13 298 1 405 0 0 0 chr2 34282140 34282185 -218974398 + (CA)n Simple_repeat Simple_repeat 1 45 0 1339 146 9 9 chr2 34282198 34282418 -218974165 - AluJo SINE Alu -13 299 80 1386 196 116 19 chr2 34282735 34283046 -218973537 + MER2 DNA MER2_type 1 341 -4 193 94 0 0 chr2 34283214 34283246 -218973337 + L2 LINE L2 3022 3053 -219 2378 157 13 8 chr2 34283458 34283853 -218972730 - LOR1b LTR ERV1 0 461 65 1979 67 119 0 chr2 34283854 34284122 -218972461 + AluY SINE Alu 2 301 -10 217 287 11 0 chr2 34285831 34285925 -218970658 + (TA)n Simple_repeat Simple_repeat 2 96 0 23 0 0 0 chr2 34286811 34286834 -218969749 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 34286881 34286902 -218969681 + AT_rich Low_complexity Low_complexity 1 21 0 191 83 0 0 chr2 34287421 34287445 -218969138 - MIR SINE MIR -140 68 45 183 265 218 14 chr2 34289157 34289304 -218967279 + MIR SINE MIR 83 259 -3 256 238 199 37 chr2 34290013 34290149 -218966434 + MIR3 SINE MIR 13 165 -43 335 302 43 7 chr2 34290194 34290333 -218966250 - MIR SINE MIR -3 259 116 752 158 17 0 chr2 34293100 34293220 -218963363 - FLAM_C SINE Alu -11 122 1 312 294 159 32 chr2 34294067 34294193 -218962390 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34295924 34296210 -218960373 + AluJb SINE Alu 1 312 0 1907 101 14 20 chr2 34296394 34296690 -218959893 - AluSg SINE Alu -16 294 1 228 333 97 0 chr2 34296975 34297068 -218959515 + MIR SINE MIR 36 137 -71 2384 93 0 10 chr2 34297368 34297679 -218958904 + AluSx SINE Alu 1 308 -4 2434 90 15 0 chr2 34297679 34298013 -218958570 + L1PA14 LINE L1 5490 5828 -333 2043 102 67 0 chr2 34298014 34298298 -218958285 + AluSp SINE Alu 2 304 -9 495 293 142 5 chr2 34299386 34299591 -218956992 + MIR SINE MIR 30 262 0 488 223 85 0 chr2 34300375 34300505 -218956078 + MER5A DNA MER1_type 49 189 0 468 147 0 0 chr2 34300513 34300588 -218955995 + AluJ/FRAM SINE Alu 225 299 -13 2167 109 0 0 chr2 34300649 34300933 -218955650 - AluSg SINE Alu -26 284 1 2026 113 20 14 chr2 34301489 34301782 -218954801 - AluJb SINE Alu -17 295 1 307 272 33 11 chr2 34301987 34302079 -218954504 + CT-rich Low_complexity Low_complexity 3 96 0 427 160 126 0 chr2 34302174 34302293 -218954290 - L1ME3A LINE L1 -86 6084 5951 806 216 56 61 chr2 34303143 34303178 -218953405 - MER58A DNA MER1_type -2204 216 182 2066 146 0 7 chr2 34303178 34303480 -218953103 - AluSg SINE Alu -10 300 1 806 216 56 61 chr2 34303480 34303657 -218952926 - MER58A DNA MER1_type -2238 182 5 645 164 10 0 chr2 34303873 34303977 -218952606 - FLAM_A SINE Alu -12 130 26 1112 98 149 0 chr2 34304049 34304223 -218952360 - L1PA14 LINE L1 -2 6159 5960 195 42 0 0 chr2 34304224 34304248 -218952335 + (T)n Simple_repeat Simple_repeat 1 24 0 7822 43 0 27 chr2 34304275 34305621 -218950962 - L1PA5 LINE L1 0 6154 4830 2382 88 0 0 chr2 34305973 34306270 -218950313 + AluY SINE Alu 1 297 -14 406 223 155 10 chr2 34306330 34306433 -218950150 - L2 LINE L2 0 3313 3196 2226 98 0 23 chr2 34306530 34306837 -218949746 - AluSx SINE Alu -12 300 1 526 294 13 7 chr2 34307201 34307354 -218949229 - LTR16A LTR ERVL -2 448 295 2778 249 102 44 chr2 34307356 34307719 -218948864 - Charlie7 DNA MER1_type -1090 1522 1181 2328 80 3 10 chr2 34307719 34308018 -218948565 + AluSq SINE Alu 1 297 -16 2778 249 102 44 chr2 34308018 34308860 -218947723 - Charlie7 DNA MER1_type -1431 1181 242 1580 189 0 27 chr2 34308860 34309157 -218947426 - AluJo SINE Alu -23 289 1 2778 249 102 44 chr2 34309157 34309188 -218947395 - Charlie7 DNA MER1_type -2370 242 214 235 245 38 0 chr2 34309190 34309243 -218947340 + MLT1J2 LTR MaLR 392 446 -4 529 311 115 17 chr2 34309279 34309514 -218947069 - L3 LINE CR1 -688 889 632 2574 66 0 0 chr2 34309979 34310282 -218946301 + AluSx SINE Alu 1 303 -9 221 395 40 0 chr2 34310373 34310497 -218946086 - L2 LINE L2 -938 2376 2248 1212 203 4 4 chr2 34310700 34310936 -218945647 + AluJo SINE Alu 59 294 -18 1770 120 71 4 chr2 34311501 34311788 -218944795 + AluSx SINE Alu 3 307 0 2165 75 13 32 chr2 34312105 34312413 -218944170 - AluY SINE Alu -9 302 1 2321 103 3 6 chr2 34312426 34312737 -218943846 - AluSg SINE Alu 0 310 1 311 286 135 51 chr2 34313393 34313763 -218942820 + MLT1K LTR MaLR 188 588 0 2353 62 0 0 chr2 34313833 34314107 -218942476 + AluY SINE Alu 1 274 -37 183 42 0 0 chr2 34314107 34314131 -218942452 + (CA)n Simple_repeat Simple_repeat 1 24 0 313 266 38 87 chr2 34314506 34314690 -218941893 + MLT1K LTR MaLR 219 393 -195 215 345 115 7 chr2 34315123 34315262 -218941321 - MIR SINE MIR -89 173 20 2620 40 3 0 chr2 34315513 34315813 -218940770 - AluY SINE Alu -8 303 3 2216 62 21 92 chr2 34316229 34316566 -218940017 - AluYb8 SINE Alu -5 313 1 1261 165 0 36 chr2 34316680 34316904 -218939679 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34317191 34317326 -218939257 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34317214 34317328 -218939255 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34317334 34317393 -218939190 - Alu SINE Alu -2 299 241 2038 139 3 3 chr2 34317433 34317734 -218938849 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34318500 34318585 -218937998 + L3 LINE CR1 1488 1575 -2 1846 82 0 0 chr2 34319198 34319430 -218937153 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34319467 34319623 -218936960 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34319680 34319953 -218936630 - MLT1E LTR MaLR -97 496 200 282 247 0 14 chr2 34321928 34322001 -218934582 + CT-rich Low_complexity Low_complexity 2 73 0 2459 76 0 0 chr2 34322195 34322496 -218934087 + AluSx SINE Alu 1 301 -11 297 169 182 0 chr2 34322914 34322991 -218933592 - MER5A DNA MER1_type -3 186 96 2244 94 3 19 chr2 34323032 34323341 -218933242 - AluSc SINE Alu -5 304 1 28 48 0 0 chr2 34324750 34324792 -218931791 + AT_rich Low_complexity Low_complexity 1 42 0 2214 107 7 0 chr2 34326007 34326306 -218930277 + AluSx SINE Alu 1 301 -11 779 159 19 111 chr2 34327193 34327401 -218929182 - MER53 DNA DNA 0 189 1 543 273 58 11 chr2 34327950 34328148 -218928435 - MIR SINE MIR 0 262 52 585 241 50 87 chr2 34328484 34328617 -218927966 - L1MA9 LINE L1 -123 6189 6053 1846 163 7 3 chr2 34328617 34328918 -218927665 - AluJb SINE Alu -10 302 1 585 241 50 87 chr2 34328918 34329083 -218927500 - L1MA9 LINE L1 -259 6053 5902 692 195 144 82 chr2 34329596 34329894 -218926689 + L1ME4a LINE L1 5709 6038 -83 1616 98 0 0 chr2 34329894 34330099 -218926484 + AluSg/x SINE Alu 87 291 -21 692 195 144 82 chr2 34330099 34330189 -218926394 + L1ME4a LINE L1 6038 6121 0 1230 163 22 132 chr2 34331321 34331342 -218925241 - MER33 DNA MER1_type -2261 324 302 1521 179 20 27 chr2 34331342 34331639 -218924944 + AluJo SINE Alu 18 312 0 1230 163 22 132 chr2 34331639 34331758 -218924825 - MER33 DNA MER1_type -2283 302 171 1589 169 7 25 chr2 34331758 34332037 -218924546 + AluJo SINE Alu 12 285 -27 1230 163 22 132 chr2 34332037 34332258 -218924325 - MER33 DNA MER1_type -2414 171 2 22 0 0 0 chr2 34333338 34333360 -218923223 + AT_rich Low_complexity Low_complexity 1 22 0 24 96 0 0 chr2 34333421 34333494 -218923089 + AT_rich Low_complexity Low_complexity 1 73 0 186 43 0 0 chr2 34333872 34333895 -218922688 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2261 63 7 11 chr2 34333897 34334184 -218922399 - AluY SINE Alu -25 286 1 1667 63 0 5 chr2 34334588 34334794 -218921789 + AluY SINE Alu 1 205 -106 477 35 0 0 chr2 34334794 34334851 -218921732 + AluY SINE Alu 243 299 -11 1942 123 42 3 chr2 34335167 34335451 -218921132 - AluSx SINE Alu -17 295 1 2761 158 12 26 chr2 34336073 34336573 -218920010 + L1MB4 LINE L1 5687 6179 -1 310 71 0 0 chr2 34336599 34336641 -218919942 + L1MB8 LINE L1 6131 6172 -6 2196 107 3 0 chr2 34337205 34337494 -218919089 + AluSc SINE Alu 1 290 -19 678 248 66 30 chr2 34337602 34337800 -218918783 - MLT1F1 LTR MaLR -8 559 355 1888 88 8 4 chr2 34338490 34338740 -218917843 + AluY SINE Alu 44 294 -17 180 0 0 0 chr2 34338961 34338981 -218917602 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2270 86 33 0 chr2 34339711 34340014 -218916569 - AluSp SINE Alu 0 313 1 22 56 0 0 chr2 34340403 34340439 -218916144 + AT_rich Low_complexity Low_complexity 1 36 0 2410 71 0 3 chr2 34340754 34341050 -218915533 + AluY SINE Alu 1 295 -16 2314 110 0 0 chr2 34341064 34341365 -218915218 + AluSx SINE Alu 1 301 -11 2380 82 3 3 chr2 34341607 34341913 -218914670 + AluY SINE Alu 1 306 -5 353 304 25 20 chr2 34341925 34342093 -218914490 + MIR SINE MIR 16 182 -61 2545 43 7 3 chr2 34342725 34343025 -218913558 + AluY SINE Alu 1 301 -10 2214 57 0 50 chr2 34344270 34344593 -218911990 - AluY SINE Alu 0 308 1 21 0 0 0 chr2 34345847 34345868 -218910715 + AT_rich Low_complexity Low_complexity 1 21 0 1539 138 179 25 chr2 34346449 34346774 -218909809 - THE1C LTR MaLR 0 375 1 333 0 0 0 chr2 34346937 34346974 -218909609 + (TG)n Simple_repeat Simple_repeat 2 38 0 2013 110 3 21 chr2 34346990 34347281 -218909302 - AluSx SINE Alu -25 287 2 296 77 0 0 chr2 34347909 34347948 -218908635 + MADE1 DNA Mariner 2 40 -40 2347 106 0 3 chr2 34347948 34348260 -218908323 - AluY SINE Alu 0 311 1 1720 132 73 45 chr2 34349046 34349335 -218907248 + AluSq SINE Alu 1 297 -16 388 247 0 21 chr2 34349346 34349439 -218907144 - MIR3 SINE MIR -6 202 112 562 189 9 0 chr2 34349488 34349594 -218906989 - L1MB5 LINE L1 0 6174 6068 275 261 190 62 chr2 34350556 34350767 -218905816 + MIR SINE MIR 20 257 -5 2546 235 57 16 chr2 34351246 34352532 -218904051 - L1M2c LINE L1 -4504 2603 1275 4168 79 5 17 chr2 34352735 34353320 -218903263 - L1P LINE L1 -962 5184 4607 1603 63 0 5 chr2 34353318 34353525 -218903058 - L1PA14 LINE L1 -187 5974 5769 * 231 279 33 0 chr2 34353658 34353719 -218902864 - MIR SINE MIR -116 146 84 193 307 183 46 chr2 34353786 34353939 -218902644 - MIR3 SINE MIR -25 183 10 2015 112 17 7 chr2 34354634 34354977 -218901606 - AluSx SINE Alu 0 359 14 2015 112 17 7 chr2 34356672 34357015 -218899568 - AluSx SINE Alu 0 359 14 779 113 105 8 chr2 34357877 34358010 -218898573 + L1MB3 LINE L1 6029 6174 -9 2291 82 0 50 chr2 34358010 34358328 -218898255 - AluY SINE Alu -9 302 1 897 175 19 0 chr2 34360002 34360161 -218896422 + MLT1B LTR MaLR 1 162 -228 2145 197 130 46 chr2 34360161 34360830 -218895753 - MER50 LTR ERV1 0 734 10 1291 126 31 27 chr2 34360837 34361060 -218895523 + MLT1B LTR MaLR 167 390 0 1506 130 22 115 chr2 34361284 34361607 -218894976 + AluYb8 SINE Alu 1 293 -25 832 184 17 46 chr2 34361627 34361801 -218894782 + MLT1D LTR MaLR 5 173 -332 1247 143 0 11 chr2 34361883 34362072 -218894511 + AluJb SINE Alu 1 187 -125 333 242 15 0 chr2 34362075 34362141 -218894442 + MLT1E2 LTR MaLR 530 596 -30 1960 126 0 14 chr2 34362632 34362953 -218893630 - AluSx SINE Alu 0 317 1 2210 89 0 10 chr2 34363522 34363813 -218892770 + AluSc SINE Alu 1 288 -21 1432 183 114 34 chr2 34364027 34364078 -218892505 + MER34C LTR ERV1 36 82 -503 2401 77 0 3 chr2 34364078 34364376 -218892207 - AluSc SINE Alu -12 297 1 1432 183 114 34 chr2 34364376 34364798 -218891785 + MER34C LTR ERV1 82 581 -4 2150 123 0 0 chr2 34365206 34365507 -218891076 + AluSq SINE Alu 1 301 -12 230 300 50 20 chr2 34365534 34365634 -218890949 - L2 LINE L2 -343 2929 2827 358 297 45 18 chr2 34366314 34366425 -218890158 - L2 LINE L2 -1 3312 3199 2418 65 0 0 chr2 34366559 34366851 -218889732 - AluY SINE Alu -15 296 5 226 263 11 84 chr2 34366993 34367088 -218889495 + MIR SINE MIR 18 105 -103 23 33 0 0 chr2 34367724 34367754 -218888829 + AT_rich Low_complexity Low_complexity 1 30 0 345 356 20 14 chr2 34368022 34368168 -218888415 - L1M4 LINE L1 -1300 4846 4700 6123 142 26 27 chr2 34368189 34369346 -218887237 - L1MC2 LINE L1 0 6344 5186 1144 266 139 20 chr2 34369331 34370022 -218886561 - L1M4 LINE L1 -1462 4684 3912 * 2278 104 0 28 chr2 34370838 34371155 -218885428 + AluSq SINE Alu 1 308 -5 360 178 0 0 chr2 34371370 34371443 -218885140 + CT-rich Low_complexity Low_complexity 2 74 0 183 42 0 0 chr2 34371438 34371462 -218885121 + (TTCCC)n Simple_repeat Simple_repeat 1 24 0 * 2177 104 14 0 chr2 34371462 34371749 -218884834 - AluSx SINE Alu -21 291 1 1980 88 0 0 chr2 34371876 34372127 -218884456 + AluY SINE Alu 44 294 -17 342 0 0 0 chr2 34373230 34373268 -218883315 + (TG)n Simple_repeat Simple_repeat 2 39 0 184 349 23 12 chr2 34375132 34375218 -218881365 - MIR3 SINE MIR -4 204 118 347 252 79 36 chr2 34375286 34375425 -218881158 - MIR SINE MIR 0 262 118 2316 109 0 0 chr2 34376812 34377114 -218879469 - AluSx SINE Alu -10 302 1 252 322 117 2 chr2 34378043 34378209 -218878374 - MIR SINE MIR -67 141 3 2258 108 3 0 chr2 34378242 34378539 -218878044 + AluSp SINE Alu 1 298 -15 1362 198 133 35 chr2 34379183 34379521 -218877062 + MLT1A2 LTR MaLR 4 374 0 1902 164 20 49 chr2 34381926 34382273 -218874310 - MER1B DNA MER1_type 0 337 1 811 199 0 0 chr2 34382347 34382478 -218874105 + FLAM_C SINE Alu 6 136 -7 509 268 84 55 chr2 34382492 34382802 -218873781 - Charlie8 DNA MER1_type -2053 364 46 2022 153 3 10 chr2 34383306 34383620 -218872963 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 34383838 34383860 -218872723 + AT_rich Low_complexity Low_complexity 1 22 0 346 263 0 0 chr2 34384701 34384777 -218871806 + CT-rich Low_complexity Low_complexity 3 78 0 892 239 39 35 chr2 34384893 34385152 -218871431 - MIR SINE MIR 0 262 3 191 306 153 42 chr2 34385522 34385666 -218870917 + L2 LINE L2 3104 3263 -9 1879 128 31 7 chr2 34386017 34386306 -218870277 + AluSx SINE Alu 1 296 -16 201 250 0 0 chr2 34386497 34386545 -218870038 + A-rich Low_complexity Low_complexity 5 52 0 690 132 0 0 chr2 34387451 34387587 -218868996 + (T)n Simple_repeat Simple_repeat 1 136 0 213 288 0 0 chr2 34387590 34387663 -218868920 + T-rich Low_complexity Low_complexity 1 73 0 1588 231 52 30 chr2 34387984 34388425 -218868158 + MLT1C LTR MaLR 5 455 -12 2434 52 7 0 chr2 34388772 34389063 -218867520 - AluY SINE Alu -16 295 3 2170 62 21 95 chr2 34389479 34389817 -218866766 - AluYb8 SINE Alu -5 313 1 1231 164 0 40 chr2 34389931 34390156 -218866427 + L1MB2 LINE L1 5949 6164 -7 304 319 52 37 chr2 34390443 34390578 -218866005 - MER5A DNA MER1_type -3 186 50 * 341 281 44 26 chr2 34390466 34390580 -218866003 + MER5A DNA MER1_type 37 152 -37 364 153 0 0 chr2 34390586 34390645 -218865938 - Alu SINE Alu -2 300 242 2038 139 3 3 chr2 34390685 34390986 -218865597 - AluSg SINE Alu -9 301 1 213 306 59 24 chr2 34391752 34391837 -218864746 + L3 LINE CR1 1488 1575 -2 1829 86 0 0 chr2 34392453 34392685 -218863898 - AluY SINE Alu 0 311 80 463 205 109 32 chr2 34392722 34392878 -218863705 + MLT1E LTR MaLR 1 168 -425 1088 209 110 22 chr2 34392935 34393208 -218863375 - MLT1E LTR MaLR -97 496 200 2054 99 67 3 chr2 34394225 34394508 -218862075 + AluSc SINE Alu 1 301 -8 1744 151 3 32 chr2 34394508 34394792 -218861791 - AluJo SINE Alu -35 277 1 312 294 159 32 chr2 34395640 34395766 -218860817 + MIR SINE MIR 12 153 -109 1715 129 105 14 chr2 34397498 34397784 -218858799 + AluJb SINE Alu 1 312 0 2183 106 7 0 chr2 34397968 34398261 -218858322 - AluY SINE Alu -16 295 1 1398 232 304 8 chr2 34398567 34399166 -218857417 - LTR50 LTR ERVL -2 793 18 834 259 141 70 chr2 34399548 34400066 -218856517 - MLT1H1 LTR MaLR 0 555 1 2432 83 0 0 chr2 34400842 34401143 -218855440 + AluSx SINE Alu 1 301 -11 2072 173 49 0 chr2 34401707 34402053 -218854530 + MLT1A1 LTR MaLR 3 365 0 2007 123 3 35 chr2 34402092 34402410 -218854173 + AluSg SINE Alu 1 308 -2 2110 78 7 11 chr2 34402415 34402743 -218853840 + AluY SINE Alu 1 327 0 377 213 147 20 chr2 34402916 34403066 -218853517 + MIR SINE MIR 21 189 -73 25 0 0 0 chr2 34403181 34403206 -218853377 + AT_rich Low_complexity Low_complexity 1 25 0 699 225 91 14 chr2 34403410 34403588 -218852995 - MIR3 SINE MIR -6 202 11 2048 135 3 25 chr2 34404207 34404546 -218852037 - AluSx SINE Alu 0 332 1 237 364 0 80 chr2 34404726 34404877 -218851706 - L2 LINE L2 -177 3095 2957 691 227 36 50 chr2 34405031 34405309 -218851274 - L1MC5 LINE L1 -51 7910 7637 304 365 54 10 chr2 34405435 34405638 -218850945 - L2 LINE L2 -723 2591 2380 742 188 0 0 chr2 34405725 34405837 -218850746 + FLAM_A SINE Alu 19 130 -12 701 165 0 10 chr2 34405897 34406000 -218850583 + AluJb SINE Alu 2 103 -209 1342 184 0 18 chr2 34407082 34407305 -218849278 + MER20 DNA MER1_type 1 219 0 1417 164 117 4 chr2 34407640 34407914 -218848669 - AluJb SINE Alu -5 307 3 1218 338 62 13 chr2 34408231 34408909 -218847674 + L2 LINE L2 1606 2316 -998 249 229 143 0 chr2 34408921 34408991 -218847592 + L2 LINE L2 3224 3303 -10 1943 137 7 13 chr2 34409116 34409423 -218847160 + AluSx SINE Alu 4 308 -4 4330 124 29 75 chr2 34410583 34410630 -218845953 + Tigger1 DNA MER2_type 149 197 -2221 252 0 0 0 chr2 34410630 34410658 -218845925 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1932 142 0 4 chr2 34410658 34410939 -218845644 - AluSx SINE Alu -32 280 1 4330 124 29 75 chr2 34410939 34411012 -218845571 + Tigger1 DNA MER2_type 196 271 -2147 1450 191 25 14 chr2 34411012 34411290 -218845293 - AluJb SINE Alu -31 281 1 4330 124 29 75 chr2 34411290 34411935 -218844648 + Tigger1 DNA MER2_type 271 880 -1538 808 142 0 0 chr2 34411935 34412055 -218844528 + FRAM SINE Alu 40 159 -17 5635 104 14 54 chr2 34412072 34412916 -218843667 + Tigger1 DNA MER2_type 869 1677 -741 2219 114 0 0 chr2 34412916 34413213 -218843370 + AluSq SINE Alu 1 297 -16 5635 104 14 54 chr2 34413213 34413254 -218843329 + Tigger1 DNA MER2_type 1677 1718 -700 370 111 0 0 chr2 34413252 34413306 -218843277 + Tigger1 DNA MER2_type 2258 2311 -107 * 374 280 173 7 chr2 34413393 34413543 -218843040 + MIR SINE MIR 19 193 -69 609 14 0 0 chr2 34414500 34414570 -218842013 + (TTTC)n Simple_repeat Simple_repeat 3 72 0 1246 273 80 25 chr2 34414811 34414926 -218841657 - L1ME4a LINE L1 -170 6020 5913 2307 92 0 3 chr2 34414926 34415219 -218841364 - AluSc SINE Alu -17 292 1 1246 273 80 25 chr2 34415219 34415692 -218840891 - L1ME4a LINE L1 -277 5913 5400 2130 116 3 3 chr2 34415982 34416274 -218840309 - AluSx SINE Alu -14 298 7 334 273 89 94 chr2 34416285 34416900 -218839683 - L1ME4a LINE L1 -1125 5090 4482 2555 57 0 0 chr2 34416900 34417198 -218839385 - AluY SINE Alu -13 298 1 334 273 89 94 chr2 34417198 34417716 -218838867 - L1ME4a LINE L1 -1733 4482 3963 1456 190 0 22 chr2 34417727 34418001 -218838582 - AluJo SINE Alu -44 268 1 244 303 26 57 chr2 34418294 34418522 -218838061 - L1ME4a LINE L1 -3141 3074 2854 227 325 102 64 chr2 34418649 34418806 -218837777 - L2 LINE L2 0 3272 3110 1192 89 6 0 chr2 34419204 34419361 -218837222 + AluSg SINE Alu 11 168 -142 311 48 0 0 chr2 34419365 34419407 -218837176 + AluSc SINE Alu 255 296 -3 280 275 132 57 chr2 34419429 34419599 -218836984 - L2 LINE L2 -1409 1905 1749 2264 68 0 68 chr2 34419599 34419920 -218836663 + AluY SINE Alu 1 299 -12 280 275 132 57 chr2 34419920 34420152 -218836431 - L2 LINE L2 -1565 1749 1473 2364 148 0 20 chr2 34420333 34420677 -218835906 - MER1B DNA MER1_type 0 337 1 2766 124 43 24 chr2 34420688 34420849 -218835734 + MSTA LTR MaLR 1 157 -271 1544 103 158 48 chr2 34420849 34421122 -218835461 - AluSg1 SINE Alu -6 303 1 2766 124 43 24 chr2 34421122 34421380 -218835203 + MSTA LTR MaLR 157 428 0 326 256 35 35 chr2 34421940 34422026 -218834557 + HAL1 LINE L1 3 88 -2419 613 167 0 26 chr2 34422028 34422142 -218834441 - L1M3e LINE L1 -6913 117 7 1297 236 64 21 chr2 34422142 34422469 -218834114 - MLT1F LTR MaLR -201 341 1 572 192 33 0 chr2 34422621 34422741 -218833842 - MLT1B LTR MaLR -46 344 221 385 195 23 11 chr2 34422844 34422931 -218833652 - MLT1B LTR MaLR -92 298 211 301 267 35 35 chr2 34423244 34423330 -218833253 + HAL1 LINE L1 3 88 -2419 472 260 13 78 chr2 34423339 34423493 -218833090 + HAL1 LINE L1 410 553 -1954 252 301 19 58 chr2 34423634 34423737 -218832846 - MLT1K LTR MaLR -362 226 128 400 250 203 37 chr2 34424949 34425249 -218831334 - L1ME4a LINE L1 -4070 2326 1977 483 225 18 0 chr2 34425313 34425424 -218831159 - L1MA10 LINE L1 -3 6331 6219 1483 147 121 11 chr2 34425610 34425882 -218830701 - AluSg1 SINE Alu -7 302 1 277 313 85 24 chr2 34426347 34426527 -218830056 - MIR SINE MIR -67 141 3 21 57 0 0 chr2 34427029 34427064 -218829519 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 34427691 34427712 -218828871 + AT_rich Low_complexity Low_complexity 1 21 0 2427 57 0 27 chr2 34427846 34428145 -218828438 - AluY SINE Alu -20 291 1 2166 177 6 5 chr2 34428217 34428709 -218827874 - MER67A LTR ERV1 -2 541 1 517 291 62 36 chr2 34428733 34429008 -218827575 + L1MC4a LINE L1 5619 5900 -1908 2074 131 3 3 chr2 34429228 34429526 -218827057 - AluSx SINE Alu -14 298 1 1964 132 11 0 chr2 34429986 34430288 -218826295 - AluSx SINE Alu 0 305 1 2243 94 16 7 chr2 34431078 34431387 -218825196 - AluSx SINE Alu 0 312 1 180 0 0 0 chr2 34431665 34431685 -218824898 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 230 261 0 15 chr2 34432102 34432167 -218824416 + A-rich Low_complexity Low_complexity 4 67 0 2327 94 0 10 chr2 34432303 34432610 -218823973 - AluSg SINE Alu -6 304 1 406 192 0 14 chr2 34432636 34432709 -218823874 + Tigger1 DNA MER2_type 4 75 -2343 2376 77 3 0 chr2 34432831 34433130 -218823453 + AluSg SINE Alu 5 304 -6 3267 171 52 3 chr2 34433130 34433702 -218822881 - L1MB7 LINE L1 -61 6123 5524 349 239 65 28 chr2 34433703 34433830 -218822753 - MIR SINE MIR -73 135 4 2151 109 0 52 chr2 34434659 34434988 -218821595 - AluSx SINE Alu 0 312 1 192 204 56 0 chr2 34435419 34435473 -218821110 - MIR SINE MIR -104 158 102 26 0 0 0 chr2 34436065 34436091 -218820492 + AT_rich Low_complexity Low_complexity 1 26 0 342 169 0 0 chr2 34437303 34437368 -218819215 + (CACCAT)n Simple_repeat Simple_repeat 4 68 0 2364 75 14 0 chr2 34437473 34437767 -218818816 - AluSp SINE Alu -10 303 6 473 313 51 20 chr2 34438509 34438704 -218817879 + MIR SINE MIR 50 250 -12 1984 126 7 0 chr2 34439285 34439562 -218817021 + AluSx SINE Alu 1 279 -33 1987 125 3 0 chr2 34439707 34439995 -218816588 - AluSx SINE Alu -23 289 1 875 278 51 42 chr2 34439995 34440412 -218816171 - L2 LINE L2 -591 2723 2300 452 352 73 29 chr2 34440499 34440880 -218815703 - L2 LINE L2 -1636 1678 1281 2108 119 7 3 chr2 34441288 34441581 -218815002 + AluSx SINE Alu 1 294 -18 297 346 79 0 chr2 34441590 34441717 -218814866 + L2 LINE L2 2715 2851 -463 214 308 0 0 chr2 34441983 34442035 -218814548 + L2 LINE L2 3262 3313 0 227 387 8 16 chr2 34442500 34442624 -218813959 - L3 LINE CR1 -5 1572 1450 752 232 36 85 chr2 34444923 34445229 -218811354 - L2 LINE L2 -1 3312 3022 398 373 7 13 chr2 34445541 34445691 -218810892 + L2 LINE L2 3123 3271 -1 691 292 21 10 chr2 34446150 34446342 -218810241 + MIR SINE MIR 56 249 -13 1820 152 0 71 chr2 34446556 34446892 -218809691 + AluJb SINE Alu 1 312 0 793 178 81 6 chr2 34448039 34448213 -218808370 - MER53 DNA DNA 0 189 3 2303 97 3 0 chr2 34448297 34448595 -218807988 + AluSg SINE Alu 1 299 -11 261 161 161 81 chr2 34450078 34450165 -218806418 + L2 LINE L2 3220 3313 0 7814 123 38 11 chr2 34450253 34451451 -218805132 - Tigger3b DNA MER2_type 0 1231 1 2223 65 33 0 chr2 34451504 34451780 -218804803 + AluY SINE Alu 1 285 -26 341 309 108 7 chr2 34453017 34453156 -218803427 + MIR SINE MIR 107 259 -3 535 207 241 0 chr2 34453195 34453340 -218803243 + MER5A DNA MER1_type 10 189 0 406 269 60 30 chr2 34453635 34453769 -218802814 + MER5A DNA MER1_type 50 187 -2 312 183 12 37 chr2 34453785 34453867 -218802716 + L2 LINE L2 2199 2278 -1036 209 316 33 72 chr2 34455396 34455450 -218801133 - MER5B DNA MER1_type -7 171 116 2065 87 42 11 chr2 34455450 34455736 -218800847 + AluSc SINE Alu 1 295 -14 209 316 33 72 chr2 34455736 34455833 -218800750 - MER5B DNA MER1_type -62 116 26 2509 70 0 13 chr2 34457056 34457371 -218799212 + AluY SINE Alu 1 311 0 368 347 60 28 chr2 34457414 34457665 -218798918 - L2 LINE L2 -1746 1568 1310 21 36 0 0 chr2 34457787 34457815 -218798768 + GC_rich Low_complexity Low_complexity 1 28 0 431 234 88 22 chr2 34457983 34458120 -218798463 - MIR3 SINE MIR -60 148 3 233 290 58 0 chr2 34459582 34459651 -218796932 + L2 LINE L2 3182 3254 -18 2265 76 24 3 chr2 34460594 34460882 -218795701 + AluY SINE Alu 1 294 -17 201 219 0 0 chr2 34461163 34461204 -218795379 + MIR3 SINE MIR 162 202 -6 216 0 0 0 chr2 34462004 34462028 -218794555 + (T)n Simple_repeat Simple_repeat 1 24 0 236 324 0 28 chr2 34462235 34462306 -218794277 + L2 LINE L2 3163 3231 -41 540 280 13 7 chr2 34463065 34463215 -218793368 - MIR SINE MIR -59 203 53 601 225 46 26 chr2 34463648 34463799 -218792784 + Charlie8 DNA MER1_type 20 173 -2244 336 210 0 0 chr2 34464332 34464394 -218792189 + L2 LINE L2 3250 3311 -2 207 352 38 19 chr2 34464772 34464877 -218791706 + L2 LINE L2 2943 3049 -223 787 274 12 35 chr2 34464963 34465218 -218791365 - MIR SINE MIR -6 256 8 203 349 73 18 chr2 34465326 34465435 -218791148 + L2 LINE L2 3138 3252 -20 1747 141 12 56 chr2 34466026 34466346 -218790237 - AluSg SINE Alu -4 306 1 2288 112 3 10 chr2 34467526 34467840 -218788743 + AluSx SINE Alu 1 312 0 246 317 54 2 chr2 34467862 34467972 -218788611 - MIR SINE MIR -78 130 17 1102 129 129 77 chr2 34468291 34468539 -218788044 - LTR1B LTR ERV1 -211 615 355 336 39 77 19 chr2 34468539 34468591 -218787992 - MLT2A2 LTR ERVL 0 453 399 760 97 0 0 chr2 34468595 34468688 -218787895 + 7SLRNA srpRNA srpRNA 211 303 -17 201 154 0 0 chr2 34468689 34468728 -218787855 + (CA)n Simple_repeat Simple_repeat 2 40 0 2091 116 7 7 chr2 34468751 34469044 -218787539 - AluSx SINE Alu -19 293 1 2110 121 0 0 chr2 34469606 34469923 -218786660 + AluSx SINE Alu 3 319 0 1879 153 0 3 chr2 34470140 34470427 -218786156 + AluJb SINE Alu 1 286 -26 255 265 0 0 chr2 34470568 34470636 -218785947 + G-rich Low_complexity Low_complexity 4 71 0 189 0 0 0 chr2 34471270 34471291 -218785292 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 485 16 16 0 chr2 34471290 34471352 -218785231 + (TG)n Simple_repeat Simple_repeat 2 64 0 237 33 0 0 chr2 34471362 34471392 -218785191 + (TC)n Simple_repeat Simple_repeat 1 30 0 221 167 0 24 chr2 34472084 34472126 -218784457 + (CATA)n Simple_repeat Simple_repeat 3 43 0 492 272 168 8 chr2 34472134 34472449 -218784134 - L1ME LINE L1 -432 5689 5326 23 0 0 0 chr2 34472543 34472566 -218784017 + AT_rich Low_complexity Low_complexity 1 23 0 924 171 0 13 chr2 34472714 34472872 -218783711 + FRAM SINE Alu 11 166 -10 380 248 68 53 chr2 34473055 34473261 -218783322 - L1ME LINE L1 -1371 4775 4567 187 357 132 41 chr2 34473346 34473428 -218783155 + L2 LINE L2 3011 3084 -229 2067 125 0 29 chr2 34473428 34473739 -218782844 - AluSq SINE Alu -11 302 1 1530 185 6 46 chr2 34473743 34474067 -218782516 - AluJo SINE Alu -1 311 1 187 357 132 41 chr2 34474067 34474245 -218782338 + L2 LINE L2 3086 3300 -13 2077 130 7 0 chr2 34474778 34475070 -218781513 + AluSx SINE Alu 1 294 -18 722 193 0 8 chr2 34475457 34475576 -218781007 + AluJb SINE Alu 1 118 -194 26 30 0 0 chr2 34475578 34475611 -218780972 + AT_rich Low_complexity Low_complexity 1 33 0 204 135 0 27 chr2 34475955 34475992 -218780591 + (CA)n Simple_repeat Simple_repeat 1 36 0 464 270 79 42 chr2 34476799 34477040 -218779543 - MIR SINE MIR 0 262 13 230 282 134 74 chr2 34477182 34477331 -218779252 - L3 LINE CR1 -498 1079 922 2138 125 0 0 chr2 34477619 34477915 -218778668 + AluSx SINE Alu 1 296 -16 665 184 0 0 chr2 34478145 34478254 -218778329 + FLAM_A SINE Alu 2 110 -32 21 36 0 0 chr2 34478269 34478297 -218778286 + AT_rich Low_complexity Low_complexity 1 28 0 2244 75 3 0 chr2 34478300 34478582 -218778001 + AluY SINE Alu 1 283 -28 2230 96 3 3 chr2 34479018 34479311 -218777272 - AluY SINE Alu -18 293 1 2927 3 3 0 chr2 34480770 34481084 -218775499 - AluYb8 SINE Alu -3 315 1 312 27 0 0 chr2 34481427 34481464 -218775119 + (CA)n Simple_repeat Simple_repeat 2 38 0 2589 47 0 3 chr2 34481956 34482255 -218774328 + AluY SINE Alu 1 298 -13 309 336 89 7 chr2 34483469 34483615 -218772968 + MIR3 SINE MIR 3 160 -48 1126 148 72 55 chr2 34484401 34484638 -218771945 - L1MB7 LINE L1 -1 6183 5943 21 0 0 0 chr2 34485333 34485354 -218771229 + AT_rich Low_complexity Low_complexity 1 21 0 2244 130 0 0 chr2 34485416 34485723 -218770860 - AluSx SINE Alu -5 307 1 235 261 14 0 chr2 34486373 34486442 -218770141 + (TA)n Simple_repeat Simple_repeat 2 71 0 1918 152 7 10 chr2 34486624 34486927 -218769656 - AluJo SINE Alu -10 302 1 263 28 28 0 chr2 34487549 34487585 -218768998 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 210 307 158 0 chr2 34488482 34488583 -218768000 - L2 LINE L2 -10 3262 3146 838 181 36 91 chr2 34489138 34489359 -218767224 - MER6B DNA MER2_type 0 210 2 267 31 0 0 chr2 34489367 34489399 -218767184 + (CA)n Simple_repeat Simple_repeat 2 33 0 433 297 55 44 chr2 34490045 34490227 -218766356 + MIR SINE MIR 23 206 -56 2040 100 14 3 chr2 34490387 34490676 -218765907 + AluY SINE Alu 11 302 -9 410 310 19 19 chr2 34491257 34491415 -218765168 + L1MC4 LINE L1 7525 7682 -360 936 175 0 24 chr2 34491425 34491591 -218764992 + FRAM SINE Alu 11 172 -4 2029 118 25 4 chr2 34491641 34491921 -218764662 + AluSx SINE Alu 1 286 -26 192 77 0 0 chr2 34491958 34491984 -218764599 + (CA)n Simple_repeat Simple_repeat 2 27 0 434 186 20 41 chr2 34492504 34492616 -218763967 + MLT1F LTR MaLR 444 540 -2 * 451 97 0 0 chr2 34492616 34492673 -218763910 - LTR37B LTR ERV1 -214 254 198 1085 190 51 42 chr2 34492789 34493005 -218763578 - MER20 DNA MER1_type -1 218 1 844 157 42 30 chr2 34493007 34493173 -218763410 - MER5A DNA MER1_type -20 169 2 306 298 21 0 chr2 34493192 34493286 -218763297 - LTR37B LTR ERV1 -368 100 5 2416 86 3 0 chr2 34493722 34494024 -218762559 + AluSp SINE Alu 1 303 -10 2407 65 0 10 chr2 34494046 34494352 -218762231 + AluY SINE Alu 1 303 -8 969 216 120 10 chr2 34494571 34494863 -218761720 + MER33 DNA MER1_type 1 324 0 951 248 54 29 chr2 34494913 34495155 -218761428 - MIR SINE MIR -10 252 5 477 312 91 56 chr2 34495176 34495606 -218760977 + L1M4 LINE L1 2658 3102 -3044 2603 64 0 6 chr2 34495665 34495978 -218760605 + AluY SINE Alu 1 311 0 203 122 0 49 chr2 34496170 34496211 -218760372 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 207 0 0 0 chr2 34498279 34498302 -218758281 + (A)n Simple_repeat Simple_repeat 1 23 0 734 217 0 0 chr2 34498547 34498690 -218757893 + FRAM SINE Alu 1 140 -36 612 53 69 0 chr2 34498707 34498838 -218757745 + (TA)n Simple_repeat Simple_repeat 1 140 0 835 95 17 0 chr2 34499979 34500095 -218756488 - MER41A LTR ERV1 -265 289 172 195 167 0 0 chr2 34500286 34500328 -218756255 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 3301 100 30 22 chr2 34500635 34501213 -218755370 - MER41A LTR ERV1 0 635 21 1706 142 3 30 chr2 34501213 34501509 -218755074 + AluJb SINE Alu 13 300 -12 2894 3 0 0 chr2 34502016 34502324 -218754259 - AluYa5 SINE Alu -3 308 1 2047 76 0 0 chr2 34503185 34503447 -218753136 - AluY SINE Alu -49 262 1 519 220 262 0 chr2 34503619 34503760 -218752823 + MER45A DNA AcHobo 1 178 0 459 126 147 11 chr2 34504245 34504340 -218752243 - MER53 DNA DNA 0 189 82 447 216 24 0 chr2 34504394 34504519 -218752064 - MER53 DNA DNA -55 134 7 12783 122 38 19 chr2 34504670 34505530 -218751053 - Tigger4(Zombi) DNA MER2_type 0 2731 1889 2068 133 7 0 chr2 34505530 34505830 -218750753 + AluSx SINE Alu 1 302 -10 12783 122 38 19 chr2 34505830 34505911 -218750672 - Tigger4(Zombi) DNA MER2_type -842 1889 1811 2169 93 26 16 chr2 34505911 34506221 -218750362 + AluSq SINE Alu 1 313 0 12783 122 38 19 chr2 34506221 34507300 -218749283 - Tigger4(Zombi) DNA MER2_type -920 1811 672 2254 94 10 19 chr2 34507309 34507616 -218748967 - AluSx SINE Alu -8 304 1 297 217 0 0 chr2 34507618 34507678 -218748905 + Tigger1 DNA MER2_type 2359 2418 0 282 257 18 26 chr2 34507678 34507791 -218748792 - MIR SINE MIR -27 235 124 477 164 58 19 chr2 34507808 34507912 -218748671 - L1MB7 LINE L1 -19 6165 6058 762 164 164 11 chr2 34507919 34508126 -218748457 - MER33 DNA MER1_type -96 228 1 409 253 53 33 chr2 34508139 34508289 -218748294 - L1MD2 LINE L1 -1 6358 6206 5484 146 29 14 chr2 34508339 34509985 -218746598 - L1PB1 LINE L1 -3 6148 4476 278 300 104 56 chr2 34510129 34510295 -218746288 + L1MC4a LINE L1 3876 4033 -2113 1535 166 50 14 chr2 34510295 34510573 -218746010 - AluJb SINE Alu -20 292 5 278 300 104 56 chr2 34510573 34511012 -218745571 + L1MC4a LINE L1 4033 4510 -1636 688 285 94 47 chr2 34511717 34511887 -218744696 + L1MC4a LINE L1 5254 5415 -2393 1647 149 47 24 chr2 34511887 34512183 -218744400 + AluJb SINE Alu 1 303 -9 688 285 94 47 chr2 34512183 34512395 -218744188 + L1MC4a LINE L1 5415 5654 -2154 631 259 146 0 chr2 34512449 34512634 -218743949 - MIR SINE MIR -32 230 19 537 312 55 7 chr2 34512642 34512934 -218743649 + L1MC4a LINE L1 5646 5951 -1857 2313 96 0 0 chr2 34513122 34513414 -218743169 + AluSq SINE Alu 1 292 -21 180 77 0 0 chr2 34513417 34513443 -218743140 + (TAA)n Simple_repeat Simple_repeat 2 27 0 962 221 53 0 chr2 34513923 34514149 -218742434 - Charlie2a DNA MER1_type -1892 970 733 260 186 136 0 chr2 34514262 34514321 -218742262 - Charlie2a DNA MER1_type -2634 148 82 2159 106 16 0 chr2 34514438 34514741 -218741842 - AluSx SINE Alu -4 308 1 1492 147 88 53 chr2 34514744 34515029 -218741554 - AluJo SINE Alu -17 295 1 1839 138 10 7 chr2 34515104 34515400 -218741183 + AluSc SINE Alu 1 297 -12 335 307 147 13 chr2 34515819 34515969 -218740614 - MIR SINE MIR -17 245 76 1530 151 40 4 chr2 34516606 34516858 -218739725 + AluJo SINE Alu 1 261 -51 1100 172 92 44 chr2 34517091 34517318 -218739265 + MER8 DNA MER2_type 1 238 -1 442 275 23 23 chr2 34517511 34517642 -218738941 + MIR SINE MIR 28 158 -104 204 182 146 18 chr2 34518493 34518548 -218738035 + L2 LINE L2 3206 3267 -5 2264 103 7 0 chr2 34518557 34518867 -218737716 - AluSq SINE Alu -1 312 1 4899 101 10 10 chr2 34520122 34520793 -218735790 + L1PA14 LINE L1 5488 6158 -3 251 203 0 0 chr2 34523001 34523060 -218733523 + (CCA)n Simple_repeat Simple_repeat 1 59 0 386 148 16 0 chr2 34525611 34525672 -218730911 + L2 LINE L2 3252 3313 0 981 176 11 0 chr2 34527832 34528008 -218728575 + MER58A DNA MER1_type 47 224 0 1529 204 13 23 chr2 34530452 34530756 -218725827 - AluJo SINE Alu -7 305 5 315 346 69 23 chr2 34530918 34531135 -218725448 + L2 LINE L2 2840 3066 -206 1868 161 3 3 chr2 34531209 34531508 -218725075 + AluSx SINE Alu 1 299 -13 784 231 113 29 chr2 34532046 34532284 -218724299 + MIR SINE MIR 2 259 -3 1766 115 19 0 chr2 34532365 34532634 -218723949 + L1PA8A LINE L1 5858 6131 0 291 54 0 0 chr2 34532664 34532701 -218723882 + (CA)n Simple_repeat Simple_repeat 2 38 0 342 273 23 0 chr2 34532704 34532792 -218723791 - L1MC4 LINE L1 -1339 6703 6614 180 0 0 0 chr2 34532794 34532814 -218723769 + (CA)n Simple_repeat Simple_repeat 2 21 0 289 176 0 0 chr2 34534163 34534214 -218722369 - AluJo SINE Alu -10 292 242 314 171 13 53 chr2 34534215 34534291 -218722292 - AluJo SINE Alu -143 159 87 26 0 0 0 chr2 34534482 34534508 -218722075 + AT_rich Low_complexity Low_complexity 1 26 0 2374 83 0 3 chr2 34534697 34534998 -218721585 + AluY SINE Alu 1 300 -11 256 224 0 0 chr2 34535230 34535279 -218721304 - L2 LINE L2 0 3313 3265 749 183 0 0 chr2 34535300 34535431 -218721152 + FLAM_A SINE Alu 1 131 -2 2604 64 0 0 chr2 34538739 34539050 -218717533 - AluY SINE Alu 0 311 1 221 354 39 23 chr2 34539169 34539299 -218717284 - MIR SINE MIR -111 151 20 480 263 19 39 chr2 34539993 34540149 -218716434 + L3 LINE CR1 1358 1510 -67 812 165 0 23 chr2 34540238 34540371 -218716212 + FLAM_C SINE Alu 1 130 -13 1424 153 94 21 chr2 34541144 34541431 -218715152 - AluJb SINE Alu -4 308 1 22 0 0 0 chr2 34541504 34541526 -218715057 + AT_rich Low_complexity Low_complexity 1 22 0 1723 195 107 19 chr2 34541580 34542011 -218714572 - MLT1D LTR MaLR -16 489 21 23 33 0 0 chr2 34542218 34542248 -218714335 + AT_rich Low_complexity Low_complexity 1 30 0 207 0 0 0 chr2 34542806 34542829 -218713754 + (TA)n Simple_repeat Simple_repeat 1 23 0 242 259 0 0 chr2 34542830 34542884 -218713699 + (CA)n Simple_repeat Simple_repeat 1 54 0 408 254 61 56 chr2 34543085 34543298 -218713285 + Charlie8 DNA MER1_type 36 249 -2168 314 337 135 34 chr2 34543424 34543691 -218712892 + L2 LINE L2 2821 3114 -158 579 251 86 38 chr2 34543769 34544036 -218712547 - LTR8A LTR ERV1 0 727 448 262 253 46 23 chr2 34544067 34544154 -218712429 - LTR8A LTR ERV1 -349 378 290 2648 51 0 0 chr2 34544229 34544540 -218712043 - AluY SINE Alu 0 311 1 513 224 34 54 chr2 34544690 34544837 -218711746 - LTR8 LTR ERV1 -547 144 1 247 292 73 21 chr2 34544932 34545028 -218711555 - MER5A DNA MER1_type -1 188 88 1875 140 3 16 chr2 34545109 34545417 -218711166 - AluJb SINE Alu -8 304 1 3142 134 87 30 chr2 34545550 34546220 -218710363 - LTR8A LTR ERV1 0 691 1 2604 123 17 55 chr2 34546951 34547567 -218709016 + MER4B LTR ERV1 1 779 0 479 171 96 20 chr2 34547617 34547763 -218708820 + MER105 DNA DNA 4 160 -44 635 250 60 33 chr2 34547814 34547998 -218708585 - MER5A DNA MER1_type 0 189 1 2522 183 66 52 chr2 34548115 34548281 -218708302 + LTR8A LTR ERV1 1 163 -564 3465 100 47 4 chr2 34548281 34548771 -218707812 + MER9 LTR ERVK 1 511 0 2522 183 66 52 chr2 34548771 34549048 -218707535 + LTR8A LTR ERV1 163 435 -292 4658 116 30 11 chr2 34549048 34549813 -218706770 - LTR17 LTR ERV1 0 780 1 2522 183 66 52 chr2 34549813 34550085 -218706498 + LTR8A LTR ERV1 435 727 0 21437 142 56 64 chr2 34550085 34555286 -218701297 + HUERS-P1 LTR ERV1 1 5491 -772 4992 76 34 3 chr2 34555286 34555955 -218700628 - LTR8 LTR ERV1 0 691 2 21437 142 56 64 chr2 34555955 34556621 -218699962 + HUERS-P1 LTR ERV1 5491 6161 -102 1897 145 44 8 chr2 34556636 34557001 -218699582 - LTR24C LTR ERV1 -257 378 1 2136 161 102 9 chr2 34557531 34557953 -218698630 - LOR1b LTR ERV1 0 461 1 405 319 117 50 chr2 34558307 34558519 -218698064 - L2 LINE L2 -816 2498 2302 1891 161 17 0 chr2 34558519 34558811 -218697772 + AluJb SINE Alu 1 297 -15 405 319 117 50 chr2 34558811 34558974 -218697609 - L2 LINE L2 -1012 2302 2098 2357 81 0 0 chr2 34559540 34559837 -218696746 + AluY SINE Alu 1 297 -14 1293 216 42 14 chr2 34559945 34560232 -218696351 + AluJo SINE Alu 1 295 -17 2292 91 13 0 chr2 34560238 34560545 -218696038 + AluSq SINE Alu 1 311 -2 21 0 0 0 chr2 34560554 34560575 -218696008 + AT_rich Low_complexity Low_complexity 1 21 0 460 311 68 48 chr2 34560795 34561146 -218695437 - HERVL LTR ERVL -3412 2242 1885 1299 190 57 14 chr2 34561160 34561513 -218695070 + L1ME3A LINE L1 5791 6158 -12 768 239 42 78 chr2 34561502 34561621 -218694962 - L1ME LINE L1 -458 5706 5584 * 1651 167 47 23 chr2 34561621 34561920 -218694663 - AluJo SINE Alu -6 306 1 768 239 42 78 chr2 34561920 34562135 -218694448 - L1ME LINE L1 -580 5584 5384 219 250 0 0 chr2 34562142 34562190 -218694393 + MIR SINE MIR 205 252 -10 821 268 53 0 chr2 34562356 34562602 -218693981 + MIR SINE MIR 4 262 0 263 109 22 43 chr2 34562721 34562786 -218693797 - Alu SINE Alu 0 301 242 * 877 224 53 99 chr2 34562774 34563279 -218693304 + MER34 LTR ERV1 61 542 0 23 33 0 0 chr2 34564797 34564827 -218691756 + AT_rich Low_complexity Low_complexity 1 30 0 349 222 108 57 chr2 34565004 34565270 -218691313 - MER34C LTR ERV1 0 594 378 315 208 0 0 chr2 34565434 34565507 -218691076 - MER34C LTR ERV1 -469 101 1 2324 112 0 0 chr2 34565980 34566284 -218690299 - AluSx SINE Alu -8 304 1 2103 136 91 18 chr2 34567707 34568104 -218688479 + MSTA LTR MaLR 1 426 -2 259 310 124 16 chr2 34568392 34568521 -218688062 - MIR3 SINE MIR -48 160 18 3020 141 20 0 chr2 34568762 34569323 -218687260 - L1 LINE L1 -1503 4643 4072 342 272 34 7 chr2 34569454 34569601 -218686982 - HAL1 LINE L1 -1045 1462 1312 1381 156 12 8 chr2 34569664 34569921 -218686662 - L1MB3 LINE L1 -1 6182 5925 250 146 0 0 chr2 34569921 34569962 -218686621 - MLT2B1 LTR ERVL 0 520 480 255 103 0 0 chr2 34569962 34570001 -218686582 + (TG)n Simple_repeat Simple_repeat 2 40 0 256 81 0 0 chr2 34570090 34570127 -218686456 - MLT2D LTR ERVL -118 296 260 648 168 8 8 chr2 34570153 34570272 -218686311 + FLAM_A SINE Alu 21 139 -3 433 106 0 0 chr2 34570287 34570353 -218686230 - L1MB3 LINE L1 -252 5928 5863 421 144 22 0 chr2 34570366 34570456 -218686127 + CT-rich Low_complexity Low_complexity 3 94 0 708 211 8 0 chr2 34570564 34570697 -218685886 - AluJo SINE Alu -176 136 3 194 224 75 30 chr2 34571333 34571400 -218685183 + L2 LINE L2 3144 3213 -100 340 68 0 0 chr2 34571667 34571711 -218684872 - MER57B LTR ERV1 -65 369 326 1389 181 56 47 chr2 34572909 34573205 -218683378 - MLT1A1 LTR MaLR 0 365 64 2196 132 3 0 chr2 34573205 34573516 -218683067 - AluSx SINE Alu 0 312 1 1389 181 56 47 chr2 34573516 34573579 -218683004 - MLT1A1 LTR MaLR -301 64 3 834 266 95 4 chr2 34574547 34574810 -218681773 + MLT1L LTR MaLR 3 289 -326 216 396 0 0 chr2 34575483 34575647 -218680936 + (TGG)n Simple_repeat Simple_repeat 3 166 0 893 252 62 0 chr2 34576173 34576431 -218680152 + MLT1L LTR MaLR 270 543 -72 232 170 38 0 chr2 34576583 34576636 -218679947 - AluSq SINE Alu -1 301 247 2101 134 0 3 chr2 34576940 34577238 -218679345 - AluSx SINE Alu -15 297 1 316 308 30 15 chr2 34577259 34577392 -218679191 + MIR SINE MIR 100 234 -28 227 225 110 75 chr2 34577474 34577647 -218678936 + LTR16A1 LTR ERVL 60 238 -219 1802 112 0 0 chr2 34577665 34577906 -218678677 - AluSq SINE Alu -72 241 1 717 131 10 0 chr2 34577939 34578038 -218678545 + FLAM_C SINE Alu 26 125 -18 2263 249 52 30 chr2 34578059 34578371 -218678212 - L1MEc LINE L1 -2748 4209 3905 2329 105 0 10 chr2 34578371 34578684 -218677899 - AluSx SINE Alu -2 310 1 2263 249 52 30 chr2 34578684 34578774 -218677809 - L1MEc LINE L1 -3052 3905 3818 2602 160 113 66 chr2 34578774 34578958 -218677625 + LTR29 LTR ERV1 1 175 -447 1617 194 0 7 chr2 34578958 34579236 -218677347 + AluJo SINE Alu 1 276 -36 180 0 0 0 chr2 34579241 34579261 -218677322 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2602 160 113 66 chr2 34579261 34579664 -218676919 + LTR29 LTR ERV1 178 622 0 2263 249 52 30 chr2 34579664 34580107 -218676476 - L1MEc LINE L1 -3139 3818 3344 599 249 80 50 chr2 34580151 34580527 -218676056 - MER21B LTR ERV1 -57 806 348 1952 134 7 7 chr2 34580554 34580887 -218675696 - AluSx SINE Alu 0 333 1 1079 253 53 61 chr2 34580899 34581292 -218675291 - L1MEc LINE L1 -3969 3169 2783 2112 149 131 18 chr2 34581292 34581682 -218674901 - Tigger2a DNA MER2_type 0 434 1 1079 253 53 61 chr2 34581682 34581991 -218674592 - L1MEc LINE L1 -4355 2783 2473 2061 259 42 55 chr2 34582150 34582336 -218674247 - L1MEc LINE L1 -4544 2415 2228 2255 86 0 14 chr2 34582336 34582665 -218673918 - AluSp SINE Alu 0 325 1 2061 259 42 55 chr2 34582665 34582824 -218673759 - L1MEc LINE L1 -4731 2228 2068 2220 153 0 61 chr2 34582824 34583183 -218673400 + MER1B DNA MER1_type 1 337 0 2061 259 42 55 chr2 34583183 34583852 -218672731 - L1MEc LINE L1 -4891 2068 1412 1140 165 15 92 chr2 34583852 34584112 -218672471 + MER65A LTR ERV1 2 241 -204 1033 179 49 0 chr2 34584107 34584291 -218672292 - THE1B LTR MaLR -171 193 1 * 1904 238 69 30 chr2 34584291 34584782 -218671801 - L1MEc LINE L1 -6339 520 11 988 119 0 0 chr2 34585162 34585288 -218671295 + FLAM_C SINE Alu 1 126 -7 2246 122 0 13 chr2 34585843 34586155 -218670428 + AluJo SINE Alu 1 308 -4 1734 182 106 34 chr2 34586285 34586356 -218670227 + LTR8A LTR ERV1 290 355 -372 2093 123 3 37 chr2 34586356 34586680 -218669903 - AluSp SINE Alu 0 313 1 1734 182 106 34 chr2 34586680 34587015 -218669568 + LTR8A LTR ERV1 355 725 -2 1753 161 11 14 chr2 34587315 34587601 -218668982 + AluJo SINE Alu 7 291 -21 243 0 0 0 chr2 34587601 34587628 -218668955 + (GA)n Simple_repeat Simple_repeat 2 28 0 654 233 47 35 chr2 34588032 34588204 -218668379 - MER5B DNA MER1_type -1 177 4 847 296 105 19 chr2 34589081 34589395 -218667188 + L3 LINE CR1 1135 1475 -102 2139 168 27 37 chr2 34589438 34589455 -218667128 - MER31A LTR ERV1 0 485 469 957 96 44 0 chr2 34589455 34589590 -218666993 + L1PA12 LINE L1 6028 6168 0 2139 168 27 37 chr2 34589590 34590059 -218666524 - MER31A LTR ERV1 -16 469 4 378 226 19 0 chr2 34590478 34590563 -218666020 - MER67A LTR ERV1 -374 92 4 431 254 56 42 chr2 34591213 34591355 -218665228 + MIR SINE MIR 67 210 -52 780 28 28 0 chr2 34592211 34592318 -218664265 + (TCTA)n Simple_repeat Simple_repeat 1 110 0 1824 160 0 20 chr2 34592375 34592668 -218663915 - AluJo SINE Alu -25 287 1 2763 169 75 24 chr2 34592748 34593297 -218663286 + LTR28 LTR ERV1 1 577 -443 364 197 0 15 chr2 34593359 34593425 -218663158 + LTR28 LTR ERV1 954 1018 -2 6953 171 64 30 chr2 34593493 34594891 -218661692 + LTR28-int LTR ERV1 206 4766 -451 498 195 0 11 chr2 34594905 34594992 -218661591 + HERV17 LTR ERV1 3910 3995 -885 2533 154 21 46 chr2 34594992 34595290 -218661293 + HERV17 LTR ERV1 990 1273 -4673 3662 24 17 0 chr2 34595290 34595699 -218660884 + L1PA3 LINE L1 5740 6155 0 2533 154 21 46 chr2 34595699 34595874 -218660709 + HERV17 LTR ERV1 1273 1451 -4495 * 2781 121 0 15 chr2 34595865 34596262 -218660321 + HERV17 LTR ERV1 2218 2608 -4929 3443 86 60 16 chr2 34596263 34596766 -218659817 + LTR17 LTR ERV1 256 780 0 5418 72 6 18 chr2 34596766 34597471 -218659112 + HERV17 LTR ERV1 1 696 -7930 9640 69 6 3 chr2 34597619 34598822 -218657761 + HERV17 LTR ERV1 802 2007 -6619 * 29770 45 14 6 chr2 34598814 34600761 -218655822 + HERV17 LTR ERV1 2430 4419 -4207 2361 98 3 0 chr2 34600761 34601058 -218655525 - AluY SINE Alu -13 298 1 29770 45 14 6 chr2 34601058 34602672 -218653911 + HERV17 LTR ERV1 4419 6019 -2607 2367 69 3 0 chr2 34602693 34602984 -218653599 + HERV17 LTR ERV1 8335 8626 0 2452 58 55 0 chr2 34602984 34603293 -218653290 + LTR17 LTR ERV1 1 326 -454 10742 132 35 19 chr2 34603298 34605291 -218651292 + HERV17 LTR ERV1 2244 6995 -1 2778 164 81 22 chr2 34605292 34605852 -218650731 + LTR28 LTR ERV1 1 1231 -446 307 260 0 14 chr2 34605893 34605966 -218650617 + LTR28 LTR ERV1 949 1020 0 219 221 0 35 chr2 34606445 34606531 -218650052 + (TTTA)n Simple_repeat Simple_repeat 2 84 0 1603 181 7 27 chr2 34606599 34606898 -218649685 - AluJb SINE Alu -19 293 1 912 136 0 0 chr2 34607183 34607308 -218649275 + FLAM_C SINE Alu 3 127 -6 2007 107 44 0 chr2 34607748 34608065 -218648518 + AluY SINE Alu 1 329 0 461 248 16 16 chr2 34608274 34608399 -218648184 - L1MC4a LINE L1 -1892 5916 5792 227 295 65 42 chr2 34608459 34608654 -218647929 - L1MC4a LINE L1 -1501 4645 4456 2064 129 3 3 chr2 34608654 34608948 -218647635 - AluSx SINE Alu -18 294 1 227 295 65 42 chr2 34608948 34609277 -218647306 - L1MC4a LINE L1 -1690 4456 4076 25 75 0 0 chr2 34610954 34611007 -218645576 + AT_rich Low_complexity Low_complexity 1 53 0 686 147 9 0 chr2 34611758 34611874 -218644709 + MER97c DNA MER1_type? 53 169 -921 337 242 121 0 chr2 34611971 34612062 -218644521 + MLT1L LTR MaLR 486 587 -28 2015 150 0 0 chr2 34612535 34612835 -218643748 - AluJb SINE Alu -12 300 1 827 165 0 0 chr2 34613560 34613687 -218642896 + FRAM SINE Alu 1 127 -49 709 168 0 67 chr2 34613893 34614042 -218642541 - FRAM SINE Alu 0 176 38 1149 276 47 5 chr2 34614170 34614575 -218642008 + Charlie4a DNA MER1_type 81 502 -6 678 179 0 0 chr2 34615060 34615166 -218641417 + Tigger3(Golem) DNA MER2_type 1 106 -2923 3746 124 68 47 chr2 34615168 34615216 -218641367 + Tigger3(Golem) DNA MER2_type 2306 2352 -677 2074 116 33 7 chr2 34615216 34615518 -218641065 - AluSx SINE Alu -2 310 1 3746 124 68 47 chr2 34615518 34615707 -218640876 + Tigger3(Golem) DNA MER2_type 2352 2536 -493 2390 85 3 10 chr2 34615707 34616013 -218640570 - AluY SINE Alu -5 306 3 3746 124 68 47 chr2 34616013 34616046 -218640537 + Tigger3(Golem) DNA MER2_type 2536 2567 -462 2303 74 3 0 chr2 34616046 34616374 -218640209 + AluSp SINE Alu 1 329 0 3746 124 68 47 chr2 34616374 34616809 -218639774 + Tigger3(Golem) DNA MER2_type 2567 3029 0 904 39 45 34 chr2 34617784 34617962 -218638621 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2321 94 7 0 chr2 34618375 34618684 -218637899 - AluSp SINE Alu -2 311 1 2845 261 138 26 chr2 34619083 34619940 -218636643 - MER45C DNA AcHobo 0 953 1 555 258 148 25 chr2 34621361 34621605 -218634978 + L2 LINE L2 3040 3313 0 10032 179 36 18 chr2 34621637 34624477 -218632106 - L1MA4 LINE L1 -3 7587 4800 2512 83 0 0 chr2 34624477 34624779 -218631804 + AluY SINE Alu 2 303 -8 10032 179 36 18 chr2 34624779 34625986 -218630597 - L1MA4 LINE L1 -2790 4800 4798 189 0 0 0 chr2 34625986 34626007 -218630576 + (TTAGG)n Simple_repeat Simple_repeat 5 25 0 10032 179 36 18 chr2 34626007 34626547 -218630036 - L1MA4 LINE L1 -2792 4798 4269 751 293 61 34 chr2 34626520 34627248 -218629335 - L1MA4 LINE L1 -3901 3664 2912 * 2370 100 0 0 chr2 34627248 34627547 -218629036 - AluSx SINE Alu -13 299 1 751 293 61 34 chr2 34627547 34627594 -218628989 - L1MA4 LINE L1 -4653 2912 2868 243 0 0 0 chr2 34627605 34627632 -218628951 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 647 206 0 0 chr2 34627640 34627747 -218628836 - FLAM_A SINE Alu -35 107 1 1659 233 35 41 chr2 34627753 34628156 -218628427 - L1M4c LINE L1 -4781 1603 1199 10118 170 18 17 chr2 34628156 34629158 -218627425 - L1PA14 LINE L1 -2 6159 5160 2157 116 13 0 chr2 34629158 34629461 -218627122 - AluSp SINE Alu -6 307 1 10118 170 18 17 chr2 34629461 34630814 -218625769 - L1PA14 LINE L1 -1001 5160 3810 2539 92 20 0 chr2 34630814 34631162 -218625421 - THE1A LTR MaLR 0 355 1 11211 97 12 21 chr2 34631164 34632756 -218623827 - THE1A-int LTR MaLR -2 1578 1 2694 93 3 0 chr2 34632756 34633109 -218623474 - THE1A LTR MaLR 0 355 2 10118 170 18 17 chr2 34633109 34633566 -218623017 - L1PA14 LINE L1 -2350 3811 3337 1659 233 35 41 chr2 34633566 34633728 -218622855 - L1M4c LINE L1 -5185 1199 1041 1106 217 25 52 chr2 34633721 34634007 -218622576 - L1M4c LINE L1 -5611 692 415 * 792 246 39 0 chr2 34636017 34636224 -218620359 + L1M4 LINE L1 14 228 -6314 2191 234 38 15 chr2 34636224 34636437 -218620146 + L1M4 LINE L1 1403 1610 -5036 2185 131 22 33 chr2 34636437 34636803 -218619780 + THE1B LTR MaLR 3 364 0 2191 234 38 15 chr2 34636803 34637250 -218619333 + L1M4 LINE L1 1610 2078 -4568 807 275 27 27 chr2 34637240 34637723 -218618860 + L1M4 LINE L1 3618 4100 -2544 * 1119 259 97 8 chr2 34637733 34638104 -218618479 + MLT1D LTR MaLR 16 419 -86 713 249 69 4 chr2 34638166 34638399 -218618184 + L1M4 LINE L1 4522 4769 -1875 6983 237 25 61 chr2 34638406 34640455 -218616128 + L1PA13 LINE L1 3 1978 -4809 2426 75 0 10 chr2 34640455 34640762 -218615821 + AluY SINE Alu 1 304 -7 895 188 7 0 chr2 34640767 34640921 -218615662 + FRAM SINE Alu 3 157 -19 1792 194 62 60 chr2 34641179 34641683 -218614900 - MLT1D LTR MaLR 0 505 1 312 70 0 0 chr2 34641909 34641952 -218614631 + (CCAA)n Simple_repeat Simple_repeat 2 44 0 356 316 102 26 chr2 34644855 34645056 -218611527 - MIR SINE MIR -48 214 3 2780 77 0 0 chr2 34645508 34645861 -218610722 + THE1A LTR MaLR 1 353 -2 353 292 164 37 chr2 34646257 34646555 -218610028 - L2 LINE L2 -351 2963 2628 2345 72 14 0 chr2 34646608 34646898 -218609685 - AluY SINE Alu -17 294 1 1099 191 5 14 chr2 34646953 34647162 -218609421 - AluJo SINE Alu -18 294 88 566 258 194 26 chr2 34647210 34647551 -218609032 - LTR16A LTR ERVL -1 449 52 707 286 107 30 chr2 34647669 34648032 -218608551 + L2 LINE L2 2923 3313 0 2289 100 17 7 chr2 34648136 34648437 -218608146 + AluSp SINE Alu 1 304 -9 216 0 0 0 chr2 34648583 34648607 -218607976 + (T)n Simple_repeat Simple_repeat 1 24 0 1864 95 114 4 chr2 34649422 34649686 -218606897 + AluSg SINE Alu 1 293 -17 2026 117 37 3 chr2 34649691 34649990 -218606593 + AluSc SINE Alu 1 309 0 2109 141 3 0 chr2 34650002 34650308 -218606275 + AluSp SINE Alu 1 307 -6 371 324 119 11 chr2 34650308 34650475 -218606108 + L3 LINE CR1 1381 1569 -8 23 68 0 0 chr2 34650699 34650743 -218605840 + AT_rich Low_complexity Low_complexity 1 44 0 1072 231 112 62 chr2 34650787 34651437 -218605146 - HAL1 LINE L1 -100 2407 1725 2741 126 45 56 chr2 34651437 34652050 -218604533 + MER4B LTR ERV1 1 770 -9 688 231 71 52 chr2 34652101 34652370 -218604213 - HAL1 LINE L1 -836 1671 1398 3753 88 37 45 chr2 34652376 34652604 -218603979 - MER4E LTR ERV1 0 779 551 2999 66 8 2 chr2 34652604 34652997 -218603586 + L1PA7 LINE L1 5760 6154 0 3753 88 37 45 chr2 34652997 34653584 -218602999 - MER4E LTR ERV1 -228 551 1 1658 272 82 52 chr2 34653584 34654152 -218602431 - HAL1 LINE L1 -1126 1381 832 1558 176 74 3 chr2 34654152 34654436 -218602147 + AluJb SINE Alu 1 304 -8 1658 272 82 52 chr2 34654436 34654844 -218601739 - HAL1 LINE L1 -1675 832 438 1927 108 3 76 chr2 34654844 34655159 -218601424 - AluSx SINE Alu -20 292 1 1714 191 3 0 chr2 34655159 34655452 -218601131 - AluJo SINE Alu -17 295 1 1658 272 82 52 chr2 34655452 34655546 -218601037 - HAL1 LINE L1 -2068 439 240 1004 332 76 23 chr2 34656094 34656930 -218599653 - L2 LINE L2 -1 3271 2391 188 294 10 108 chr2 34656993 34657095 -218599488 + L2 LINE L2 3137 3228 -44 2284 116 0 0 chr2 34657182 34657493 -218599090 + AluY SINE Alu 1 311 0 363 377 80 14 chr2 34658436 34658712 -218597871 + L2 LINE L2 2977 3270 -2 373 224 17 43 chr2 34658778 34658894 -218597689 - MLT1J2 LTR MaLR -18 432 320 718 226 37 46 chr2 34659052 34659269 -218597314 - L2 LINE L2 0 3313 3099 1413 270 58 66 chr2 34659360 34660134 -218596449 - L2 LINE L2 -1002 2312 1545 211 372 41 33 chr2 34660483 34660604 -218595979 + L2 LINE L2 3102 3223 -49 552 242 22 28 chr2 34662808 34662986 -218593597 + MER5B DNA MER1_type 1 177 -1 511 270 51 0 chr2 34663565 34663743 -218592840 + MIR SINE MIR 76 262 0 21 0 0 31 chr2 34663903 34663922 -218592661 + AT_rich Low_complexity Low_complexity 1 20 -11 279 0 0 0 chr2 34663922 34663953 -218592630 + (CA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 31 chr2 34663953 34663965 -218592618 + AT_rich Low_complexity Low_complexity 20 31 0 2102 91 10 10 chr2 34664135 34664433 -218592150 - AluSq SINE Alu -12 301 4 2074 126 7 0 chr2 34664436 34664738 -218591845 - AluSx SINE Alu -8 304 1 189 0 0 0 chr2 34664743 34664764 -218591819 + (T)n Simple_repeat Simple_repeat 1 21 0 1402 111 43 5 chr2 34714954 34715161 -218541422 + AluSp SINE Alu 84 298 -15 2047 101 30 7 chr2 34715353 34715650 -218540933 + AluSg SINE Alu 1 304 -6 32 0 0 0 chr2 34716218 34716250 -218540333 + AT_rich Low_complexity Low_complexity 1 32 0 3849 137 25 2 chr2 34716341 34716970 -218539613 - L1PA15 LINE L1 -8 6157 5514 * 7539 24 2 10 chr2 34716969 34718636 -218537947 - L1PA4 LINE L1 0 6155 4488 3833 206 2 16 chr2 34718838 34719714 -218536869 - L1PA15 LINE L1 -1158 4988 4125 2466 83 0 0 chr2 34719909 34720210 -218536373 + AluY SINE Alu 1 301 -10 378 229 102 101 chr2 34720210 34720420 -218536163 - L1ME1 LINE L1 -217 5949 5743 458 260 27 41 chr2 34721080 34721226 -218535357 + MIR SINE MIR 13 156 -106 1850 158 38 20 chr2 34721235 34721582 -218535001 + MLT1A1 LTR MaLR 2 354 -11 505 253 0 31 chr2 34721799 34721961 -218534622 + MER103 DNA DNA 8 164 -2 26 30 0 0 chr2 34722283 34722316 -218534267 + AT_rich Low_complexity Low_complexity 1 33 0 324 103 0 0 chr2 34723254 34723312 -218533271 + (TC)n Simple_repeat Simple_repeat 1 58 0 2574 101 25 3 chr2 34724671 34725038 -218531545 + THE1C LTR MaLR 1 375 0 190 347 54 90 chr2 34725234 34725401 -218531182 - L2 LINE L2 -42 3230 3070 807 223 167 37 chr2 34725559 34725882 -218530701 - MLT1A1 LTR MaLR 0 365 1 265 285 21 124 chr2 34726008 34726194 -218530389 - MIR3 SINE MIR -33 175 9 344 308 75 8 chr2 34726815 34726948 -218529635 - MIR SINE MIR -28 234 93 243 115 7 79 chr2 34727673 34727812 -218528771 + (CCCCCA)n Simple_repeat Simple_repeat 4 132 0 331 270 127 0 chr2 34728513 34728639 -218527944 - MIR SINE MIR -3 259 118 2085 125 0 10 chr2 34728719 34729016 -218527567 + AluSx SINE Alu 1 294 -18 192 214 20 122 chr2 34729753 34729851 -218526732 + MIR SINE MIR 123 210 -52 2180 125 0 3 chr2 34729985 34730297 -218526286 + AluSx SINE Alu 1 311 -1 22 80 0 0 chr2 34730443 34730493 -218526090 + AT_rich Low_complexity Low_complexity 1 50 0 269 221 48 55 chr2 34730642 34730759 -218525824 - L1ME LINE L1 -318 5844 5724 860 143 0 8 chr2 34731039 34731165 -218525418 - FLAM_C SINE Alu -18 125 1 468 310 52 24 chr2 34732472 34732685 -218523898 + L2 LINE L2 411 629 -2685 22 0 0 0 chr2 34732706 34732728 -218523855 + AT_rich Low_complexity Low_complexity 1 22 0 2236 79 38 0 chr2 34732788 34733079 -218523504 + AluY SINE Alu 1 302 -9 1081 111 25 30 chr2 34733080 34733278 -218523305 + AluY SINE Alu 1 197 -114 448 190 90 0 chr2 34733499 34733599 -218522984 + MER53 DNA DNA 1 109 -80 520 117 43 32 chr2 34733685 34733779 -218522804 + MER53 DNA DNA 95 189 0 2119 116 7 13 chr2 34733928 34734231 -218522352 + AluSq SINE Alu 1 301 -12 853 178 0 0 chr2 34734285 34734414 -218522169 + FLAM_C SINE Alu 5 133 0 2210 129 3 0 chr2 34734449 34734760 -218521823 + AluSx SINE Alu 1 312 0 192 40 0 0 chr2 34734890 34734915 -218521668 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 2179 94 35 0 chr2 34734953 34735240 -218521343 + AluY SINE Alu 1 297 -14 183 200 89 0 chr2 34735300 34735345 -218521238 - MIR SINE MIR -131 131 83 1518 154 4 4 chr2 34735411 34735657 -218520926 - Tigger5 DNA MER2_type 0 2323 2078 240 216 59 0 chr2 34735647 34735698 -218520885 - Tigger5 DNA MER2_type -2244 79 26 * 321 348 50 7 chr2 34736390 34736531 -218520052 + L3 LINE CR1 1429 1575 -2 241 83 0 0 chr2 34736879 34736915 -218519668 - Alu SINE Alu -4 298 263 1091 100 13 7 chr2 34736916 34737066 -218519517 - AluSq/x SINE Alu -162 151 1 4323 109 225 3 chr2 34737592 34738268 -218518315 + LTR12 LTR ERV1 1 826 0 1899 120 0 4 chr2 34738268 34738534 -218518049 + AluSq SINE Alu 31 295 -18 2154 95 3 0 chr2 34739081 34739366 -218517217 + AluY SINE Alu 1 286 -25 1350 273 111 21 chr2 34739444 34740224 -218516359 - L1MC4a LINE L1 -1 6120 5280 282 312 58 0 chr2 34740646 34740800 -218515783 - L1MC4a LINE L1 -1302 4844 4682 311 258 69 38 chr2 34740913 34741072 -218515511 - L1ME LINE L1 -395 5709 5546 1201 231 45 132 chr2 34741108 34741752 -218514831 - MLT1E LTR MaLR -4 589 2 2288 70 37 13 chr2 34741914 34742213 -218514370 - AluY SINE Alu -3 308 3 251 224 121 0 chr2 34742865 34742923 -218513660 + MIR SINE MIR 82 146 -116 416 329 30 6 chr2 34743044 34743208 -218513375 - L3 LINE CR1 -159 1418 1251 330 384 82 25 chr2 34743844 34744281 -218512302 - L2 LINE L2 -5 3267 2806 725 307 110 49 chr2 34744678 34745186 -218511397 - MLT1K LTR MaLR -37 551 13 2396 76 3 7 chr2 34745812 34746114 -218510469 + AluY SINE Alu 1 301 -10 2022 154 7 0 chr2 34746379 34746685 -218509898 - AluSx SINE Alu -4 308 1 245 174 252 0 chr2 34746920 34747035 -218509548 - L1M LINE L1 -770 5408 5265 487 301 48 60 chr2 34747056 34747538 -218509045 - L1ME LINE L1 -937 5192 4717 1599 258 141 36 chr2 34747562 34747856 -218508727 - L1MC4 LINE L1 -116 7926 7664 2369 86 0 7 chr2 34747856 34748159 -218508424 - AluSc SINE Alu -8 301 1 1599 258 141 36 chr2 34748159 34748239 -218508344 - L1MC4 LINE L1 -378 7664 7594 2297 91 7 0 chr2 34748239 34748526 -218508057 - AluSc SINE Alu -20 289 1 1599 258 141 36 chr2 34748526 34748868 -218507715 - L1MC4 LINE L1 -448 7594 7134 526 301 156 43 chr2 34748941 34749737 -218506846 - L1ME LINE L1 -5232 887 2 1527 40 0 0 chr2 34749960 34750133 -218506450 + L1PA4 LINE L1 5979 6151 -4 197 132 26 0 chr2 34750335 34750373 -218506210 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 1864 115 80 3 chr2 34750960 34751247 -218505336 + AluSc SINE Alu 1 309 0 21 0 0 0 chr2 34751692 34751713 -218504870 + AT_rich Low_complexity Low_complexity 1 21 0 845 193 60 0 chr2 34753040 34753206 -218503377 - AluJo SINE Alu 0 312 137 207 314 0 0 chr2 34753215 34753266 -218503317 - MIR SINE MIR -119 143 93 216 276 66 79 chr2 34753972 34754124 -218502459 + L2 LINE L2 3164 3313 0 331 224 111 105 chr2 34754596 34754869 -218501714 - L1ME4a LINE L1 0 6121 5838 2245 91 0 3 chr2 34754869 34755179 -218501404 - AluSq SINE Alu 0 309 1 331 224 111 105 chr2 34755179 34755400 -218501183 - L1ME4a LINE L1 -283 5838 5620 1696 191 19 41 chr2 34755527 34755893 -218500690 - MSTD LTR MaLR 0 396 39 227 130 0 22 chr2 34755893 34755939 -218500644 + (TTCC)n Simple_repeat Simple_repeat 3 47 0 183 156 0 0 chr2 34755945 34755977 -218500606 + C-rich Low_complexity Low_complexity 2 33 0 1730 159 32 44 chr2 34755977 34756292 -218500291 - AluJo SINE Alu -1 311 1 263 122 102 0 chr2 34756292 34756341 -218500242 - MSTD LTR MaLR -373 55 2 1271 166 11 42 chr2 34756431 34756523 -218500060 + L1MA4 LINE L1 6021 6114 -186 2477 128 90 3 chr2 34756523 34756913 -218499670 - MSTA LTR MaLR -4 424 1 1271 166 11 42 chr2 34756913 34757104 -218499479 + L1MA4 LINE L1 6114 6295 -5 1929 230 132 54 chr2 34757453 34758069 -218498514 - L1MC4 LINE L1 -103 7705 7138 748 175 15 44 chr2 34758069 34758206 -218498377 - AluJo SINE Alu -169 133 1 1929 230 132 54 chr2 34758206 34758630 -218497953 - L1MC4 LINE L1 -670 7138 6748 234 62 0 0 chr2 34758630 34758662 -218497921 + (CA)n Simple_repeat Simple_repeat 2 33 0 1929 230 132 54 chr2 34758662 34758709 -218497874 - L1MC4 LINE L1 -1060 6748 6706 2608 33 3 0 chr2 34758709 34759012 -218497571 + AluY SINE Alu 8 311 0 1929 230 132 54 chr2 34759012 34759023 -218497560 - L1MC4 LINE L1 -1102 6706 6697 2307 103 0 0 chr2 34759023 34759325 -218497258 + AluSc SINE Alu 1 302 -7 1929 230 132 54 chr2 34759325 34759425 -218497158 - L1MC4 LINE L1 -1111 6697 6606 2346 76 0 52 chr2 34759425 34759753 -218496830 - AluY SINE Alu 0 311 1 1929 230 132 54 chr2 34759753 34759828 -218496755 - L1MC4 LINE L1 -1202 6606 6441 207 319 24 18 chr2 34760627 34760793 -218495790 - L2 LINE L2 -1210 2104 1938 490 303 44 26 chr2 34760834 34761051 -218495532 - MIR SINE MIR -14 248 20 276 323 71 0 chr2 34761122 34761221 -218495362 + L3 LINE CR1 1415 1520 -57 508 113 0 0 chr2 34761335 34761406 -218495177 - AluJ/FRAM SINE Alu -9 303 233 2165 101 0 66 chr2 34761595 34761913 -218494670 - AluSq SINE Alu -16 297 1 265 360 50 0 chr2 34762553 34762653 -218493930 + L2 LINE L2 3151 3255 -17 22 0 0 0 chr2 34762844 34762866 -218493717 + AT_rich Low_complexity Low_complexity 1 22 0 2153 88 7 20 chr2 34762927 34763224 -218493359 + AluSp SINE Alu 15 307 -6 945 216 63 151 chr2 34764232 34764800 -218491783 - LTR40a LTR ERVL -1 518 1 2273 240 48 7 chr2 34765164 34765701 -218490882 + MER69 DNA AcHobo 1 559 -1967 1184 255 94 19 chr2 34765707 34765817 -218490766 + MER69 DNA AcHobo 2010 2110 -416 2015 120 28 0 chr2 34765817 34766101 -218490482 + AluSg SINE Alu 1 292 -18 1184 255 94 19 chr2 34766101 34766469 -218490114 + MER69 DNA AcHobo 2110 2524 -2 2235 86 3 36 chr2 34766469 34766773 -218489810 - AluSx SINE Alu -10 302 9 785 310 85 44 chr2 34767420 34767709 -218488874 + HAL1b LINE L1 70 346 -1002 2507 55 3 10 chr2 34767709 34768021 -218488562 + AluY SINE Alu 1 310 -1 785 310 85 44 chr2 34768021 34768295 -218488288 + HAL1b LINE L1 346 656 -692 2621 149 54 46 chr2 34768304 34768606 -218487977 + MLT1D LTR MaLR 3 312 -193 2318 172 94 9 chr2 34768606 34769054 -218487529 - MER66B LTR ERV1 0 486 1 2621 149 54 46 chr2 34769054 34769248 -218487335 + MLT1D LTR MaLR 312 503 -2 418 201 30 79 chr2 34769255 34769419 -218487164 + HAL1b LINE L1 624 779 -569 1445 288 60 12 chr2 34769456 34769939 -218486644 - MLT1J LTR MaLR -5 506 1 783 220 126 106 chr2 34769939 34770169 -218486414 + HAL1b LINE L1 783 1007 -341 10662 58 22 7 chr2 34770169 34771523 -218485060 - SVA Other Other 0 1386 12 783 220 126 106 chr2 34771523 34771847 -218484736 + HAL1b LINE L1 1007 1348 0 27 0 0 0 chr2 34771905 34771932 -218484651 + AT_rich Low_complexity Low_complexity 1 27 0 1528 214 30 84 chr2 34772483 34772946 -218483637 - LTR16A LTR ERVL -7 443 6 530 309 29 62 chr2 34773732 34773975 -218482608 - MIR SINE MIR -15 247 13 275 368 9 18 chr2 34777962 34778076 -218478507 - L2 LINE L2 -181 3091 2979 242 202 27 9 chr2 34778231 34778354 -218478229 + GA-rich Low_complexity Low_complexity 1 125 0 304 239 48 14 chr2 34778355 34778482 -218478101 - L1ME LINE L1 -328 5842 5709 979 254 142 43 chr2 34779166 34779684 -218476899 - L2 LINE L2 -1 3312 2751 579 209 29 0 chr2 34779736 34779841 -218476742 + MLT1A1 LTR MaLR 3 110 -255 226 269 110 35 chr2 34780166 34780222 -218476361 - HAL1b LINE L1 0 1348 1298 2409 94 0 0 chr2 34780222 34780529 -218476054 + AluY SINE Alu 1 307 -4 226 269 110 35 chr2 34780529 34780617 -218475966 - HAL1b LINE L1 -50 1298 1193 238 186 0 51 chr2 34780662 34780721 -218475862 + L2 LINE L2 3258 3313 0 411 220 88 64 chr2 34780783 34781033 -218475550 - HAL1b LINE L1 -205 1143 888 812 232 157 14 chr2 34781055 34781425 -218475158 - HAL1b LINE L1 -526 822 400 214 159 0 72 chr2 34781428 34781497 -218475086 + T-rich Low_complexity Low_complexity 2 65 0 314 153 0 14 chr2 34781726 34781826 -218474757 - MER53 DNA DNA -30 159 2 712 251 14 106 chr2 34782715 34783040 -218473543 - L1ME3 LINE L1 0 6164 5875 1993 143 3 3 chr2 34783040 34783341 -218473242 - AluSx SINE Alu -11 301 1 712 251 14 106 chr2 34783341 34783382 -218473201 - L1ME3 LINE L1 -289 5875 5832 247 246 45 82 chr2 34783586 34783720 -218472863 - L1 LINE L1 -3230 2916 2788 419 266 60 86 chr2 34783917 34784350 -218472233 - HAL1b LINE L1 -858 490 69 2167 206 40 33 chr2 34784482 34785089 -218471494 + pTR5 LTR ERV1 741 1351 -1087 3898 90 147 149 chr2 34785099 34785923 -218470660 + LTR12 LTR ERV1 5 826 0 2225 110 0 3 chr2 34788423 34788724 -218467859 - AluSx SINE Alu -12 300 1 206 216 0 0 chr2 34788985 34789022 -218467561 + polypyrimidine Low_complexity Low_complexity 4 40 0 209 254 30 90 chr2 34789101 34789168 -218467415 + L2 LINE L2 3156 3218 -54 2126 185 13 8 chr2 34789219 34789613 -218466970 + MER57A LTR ERV1 7 402 -1 199 328 35 0 chr2 34790345 34790403 -218466180 + L2 LINE L2 3213 3272 0 1951 79 0 0 chr2 34790466 34790706 -218465877 - AluSc SINE Alu -14 295 56 432 0 0 0 chr2 34790877 34790925 -218465658 + (TG)n Simple_repeat Simple_repeat 2 49 0 24 32 0 0 chr2 34791186 34791217 -218465366 + AT_rich Low_complexity Low_complexity 1 31 0 182 256 195 12 chr2 34791316 34791398 -218465185 + L3 LINE CR1 1475 1571 -6 1577 197 97 0 chr2 34791748 34792090 -218464493 - MSTB1 LTR MaLR 0 432 68 540 233 41 0 chr2 34793262 34793408 -218463175 + MER103 DNA DNA 11 162 -4 1594 219 71 40 chr2 34793525 34793978 -218462605 + MLT1C LTR MaLR 1 467 0 621 335 133 27 chr2 34794249 34795008 -218461575 + L2 LINE L2 2468 3313 0 218 215 0 31 chr2 34795008 34795073 -218461510 + (TGAA)n Simple_repeat Simple_repeat 2 64 0 918 265 114 33 chr2 34795156 34795347 -218461236 - LTR67 LTR ERVL -1 556 382 515 72 0 175 chr2 34795347 34795444 -218461139 - MADE1 DNA Mariner 0 80 1 918 265 114 33 chr2 34795444 34795611 -218460972 - LTR67 LTR ERVL -175 382 169 863 260 145 32 chr2 34796281 34796716 -218459867 - ERVL LTR ERVL -695 5069 4586 604 200 0 0 chr2 34796717 34796812 -218459771 + FRAM SINE Alu 54 148 -28 1616 286 79 57 chr2 34796831 34796924 -218459659 - ERVL LTR ERVL -1184 4580 4490 2534 50 3 3 chr2 34796924 34797224 -218459359 - AluY SINE Alu -11 300 1 1616 286 79 57 chr2 34797224 34797782 -218458801 - ERVL LTR ERVL -1274 4490 3946 1582 194 0 58 chr2 34797782 34798107 -218458476 - AluJo SINE Alu -4 308 3 1616 286 79 57 chr2 34798107 34798768 -218457815 - ERVL LTR ERVL -1818 3946 3179 211 273 18 0 chr2 34798847 34798902 -218457681 + CT-rich Low_complexity Low_complexity 4 59 0 182 362 0 57 chr2 34800300 34800405 -218456178 - L3 LINE CR1 -1471 106 8 2225 100 0 3 chr2 34800591 34800881 -218455702 + AluSc SINE Alu 1 289 -20 1951 133 15 0 chr2 34801225 34801496 -218455087 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr2 34801506 34801529 -218455054 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2380 93 0 0 chr2 34801533 34801835 -218454748 + AluY SINE Alu 3 304 -7 1405 149 122 6 chr2 34802317 34802721 -218453862 - Charlie5 DNA MER1_type -467 2145 1669 2864 194 58 39 chr2 34802725 34803313 -218453270 + MER77 LTR ERV1 1 599 -6 1140 262 23 52 chr2 34803331 34803674 -218452909 + MER77-int LTR ERV1 14 346 -3845 1613 282 149 14 chr2 34803811 34804537 -218452046 + L2 LINE L2 938 1761 -1553 1157 261 87 29 chr2 34804539 34804635 -218451948 + L2 LINE L2 2579 2668 -645 2878 104 3 5 chr2 34804635 34805011 -218451572 + THE1C LTR MaLR 1 375 0 1157 261 87 29 chr2 34805011 34805540 -218451043 + L2 LINE L2 2668 3224 -89 2074 133 0 3 chr2 34805545 34805845 -218450738 - AluSc SINE Alu -3 306 8 1081 298 94 34 chr2 34805867 34807118 -218449465 - L1M4 LINE L1 -1703 4443 3117 2324 103 0 7 chr2 34807129 34807439 -218449144 - AluSx SINE Alu -2 310 3 25 31 0 0 chr2 34807565 34807597 -218448986 + AT_rich Low_complexity Low_complexity 1 32 0 1852 169 147 78 chr2 34807621 34807840 -218448743 - Charlie5 DNA MER1_type 0 2624 2422 2102 117 0 19 chr2 34807840 34808147 -218448436 - AluSg1 SINE Alu -8 301 1 1852 169 147 78 chr2 34808147 34808185 -218448398 - Charlie5 DNA MER1_type -202 2422 2388 1812 82 13 9 chr2 34808185 34808417 -218448166 - AluSq SINE Alu -80 233 1 1852 169 147 78 chr2 34808417 34808573 -218448010 - Charlie5 DNA MER1_type -236 2388 2244 1006 199 0 6 chr2 34808573 34808739 -218447844 + FRAM SINE Alu 1 165 -1 1852 169 147 78 chr2 34808739 34809005 -218447578 - Charlie5 DNA MER1_type -380 2244 1896 1914 127 0 20 chr2 34809135 34809435 -218447148 - AluY SINE Alu -16 295 2 1913 148 3 10 chr2 34810977 34811288 -218445295 + AluSx SINE Alu 1 309 -3 226 375 48 0 chr2 34811565 34811669 -218444914 - L2 LINE L2 -13 3259 3151 2229 112 0 0 chr2 34811760 34812055 -218444528 + AluSg SINE Alu 14 308 -2 195 274 110 0 chr2 34812169 34812242 -218444341 + MIR SINE MIR 138 218 -44 21 0 0 0 chr2 34812801 34812822 -218443761 + AT_rich Low_complexity Low_complexity 1 21 0 258 231 0 0 chr2 34813075 34813127 -218443456 + LTR30 LTR ERV1 1 52 -670 1850 137 39 152 chr2 34813127 34813609 -218442974 + LTR12 LTR ERV1 53 480 -234 207 321 83 0 chr2 34813613 34813722 -218442861 + MIR SINE MIR 144 261 -1 2498 66 0 3 chr2 34814888 34815192 -218441391 + AluY SINE Alu 1 303 -8 872 90 0 0 chr2 34815293 34815404 -218441179 + AluSg/x SINE Alu 195 305 -4 225 0 0 0 chr2 34815638 34815663 -218440920 + (T)n Simple_repeat Simple_repeat 1 25 0 216 0 0 0 chr2 34815894 34815918 -218440665 + (A)n Simple_repeat Simple_repeat 1 24 0 1317 159 34 29 chr2 34816155 34816394 -218440189 - AluJo SINE Alu -6 306 67 4191 87 14 35 chr2 34817445 34817620 -218438963 + MER41A LTR ERV1 1 178 -376 2293 85 14 3 chr2 34817620 34817913 -218438670 + AluSq SINE Alu 1 296 -17 4191 87 14 35 chr2 34817913 34818134 -218438449 + MER41A LTR ERV1 178 384 -170 2567 59 0 0 chr2 34818134 34818438 -218438145 + AluYa5 SINE Alu 1 304 -7 4191 87 14 35 chr2 34818438 34818606 -218437977 + MER41A LTR ERV1 384 554 0 1747 201 124 22 chr2 34818647 34819099 -218437484 + MLT1D LTR MaLR 8 505 0 1599 150 41 17 chr2 34819432 34819726 -218436857 + AluJo SINE Alu 1 301 -11 1553 141 54 71 chr2 34819977 34820183 -218436400 + L1MA8 LINE L1 5929 6137 -154 2385 84 0 3 chr2 34820183 34820479 -218436104 - AluY SINE Alu -16 295 1 1553 141 54 71 chr2 34820479 34820537 -218436046 + L1MA8 LINE L1 6137 6194 -97 2146 207 52 7 chr2 34820537 34820977 -218435606 - LOR1b LTR ERV1 0 461 2 1553 141 54 71 chr2 34820977 34821079 -218435504 + L1MA8 LINE L1 6194 6290 -1 1525 192 39 51 chr2 34821102 34821514 -218435069 + MLT1C LTR MaLR 53 459 -8 2188 132 0 0 chr2 34821551 34821861 -218434722 - AluSx SINE Alu -2 310 1 571 230 121 24 chr2 34821974 34822222 -218434361 - L1MEc LINE L1 -4032 2364 2093 607 211 7 7 chr2 34822222 34822374 -218434209 + (TA)n Simple_repeat Simple_repeat 1 152 0 479 280 21 69 chr2 34822391 34822580 -218434003 - AluYb8 SINE Alu -60 258 79 3324 248 70 89 chr2 34822894 34824328 -218432255 + MER61D-int LTR ERV1 3367 4772 -1986 275 277 12 12 chr2 34824635 34824718 -218431865 + HERVL18 LTR ERVL 2229 2311 -3736 22 0 0 0 chr2 34824785 34824807 -218431776 + AT_rich Low_complexity Low_complexity 1 22 0 456 346 56 49 chr2 34824878 34825536 -218431047 + HERVL18 LTR ERVL 2820 3482 -2172 * 3821 245 20 57 chr2 34825344 34826429 -218430154 + MER61D-int LTR ERV1 2014 3058 -1133 3014 179 10 2 chr2 34826432 34826925 -218429658 - LOR1a LTR ERV1 0 497 1 1654 164 183 16 chr2 34826941 34827308 -218429275 - MSTA LTR MaLR 0 428 1 9546 160 32 16 chr2 34827309 34828919 -218427664 - MSTA-int LTR MaLR -1 1650 15 2278 152 86 10 chr2 34828943 34829338 -218427245 - MSTA LTR MaLR 0 428 4 1685 219 70 111 chr2 34829381 34830067 -218426516 + MER61D-int LTR ERV1 3079 3736 -455 1339 200 165 17 chr2 34830070 34830415 -218426168 + MSTD LTR MaLR 1 396 0 1745 117 82 82 chr2 34830487 34830719 -218425864 - LTR26B LTR ERV1 0 531 300 2171 99 23 78 chr2 34830719 34831104 -218425479 + THE1B LTR MaLR 1 364 0 1745 117 82 82 chr2 34831104 34831157 -218425426 - LTR26B LTR ERV1 -231 300 248 2313 66 40 13 chr2 34831157 34831459 -218425124 - AluY SINE Alu -1 310 1 1745 117 82 82 chr2 34831459 34831515 -218425068 - LTR26B LTR ERV1 -282 249 189 1375 123 155 20 chr2 34831946 34832198 -218424385 - LTR26E LTR ERV1 -336 286 1 2373 100 3 0 chr2 34832257 34832558 -218424025 + AluY SINE Alu 1 302 -9 1329 213 7 31 chr2 34832566 34832857 -218423726 + MER61D-int LTR ERV1 3853 4136 -55 1994 164 119 11 chr2 34833733 34834112 -218422471 - MSTA LTR MaLR 0 428 9 693 94 55 31 chr2 34834120 34834247 -218422336 - MSTA-int LTR MaLR -30 1550 1421 207 0 0 0 chr2 34835531 34835554 -218421029 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 727 190 7 15 chr2 34835628 34835761 -218420822 - MLT1C LTR MaLR 0 467 336 1531 178 67 12 chr2 34835761 34836181 -218420402 + MER61D LTR ERV1 4 501 0 1146 227 81 25 chr2 34836181 34836424 -218420159 - MLT1C LTR MaLR -126 341 74 2309 102 3 3 chr2 34836424 34836727 -218419856 - AluSc SINE Alu -6 303 1 1146 227 81 25 chr2 34836727 34836804 -218419779 - MLT1C LTR MaLR -393 74 3 3607 118 10 0 chr2 34836868 34837360 -218419223 - LOR1a LTR ERV1 0 497 1 5251 109 46 64 chr2 34837736 34838577 -218418006 - LTR12 LTR ERV1 0 826 1 424 207 49 177 chr2 34839954 34840132 -218416451 - L2 LINE L2 0 3313 3188 2158 115 7 0 chr2 34840132 34840437 -218416146 + AluSx SINE Alu 6 312 0 424 207 49 177 chr2 34840437 34840563 -218416020 - L2 LINE L2 -125 3188 3048 258 313 0 0 chr2 34840571 34840638 -218415945 + MER69 DNA AcHobo 1 67 -1159 431 178 76 34 chr2 34840794 34840912 -218415671 + MER69 DNA AcHobo 2380 2502 -24 502 252 180 18 chr2 34841211 34841433 -218415150 - MIR SINE MIR -2 260 3 2118 99 14 3 chr2 34841627 34841910 -218414673 - AluSg SINE Alu -24 286 1 391 286 117 49 chr2 34841967 34842172 -218414411 - MIR SINE MIR -41 221 1 2198 124 3 0 chr2 34842603 34842902 -218413681 - AluSx SINE Alu -12 300 1 454 183 51 44 chr2 34842911 34843048 -218413535 - L1MC5 LINE L1 -52 7909 7772 3276 209 55 17 chr2 34843054 34843775 -218412808 - L1MB8 LINE L1 -8 6170 5389 3285 140 29 4 chr2 34843775 34844260 -218412323 - LOR1a LTR ERV1 0 497 1 3276 209 55 17 chr2 34844260 34844704 -218411879 - L1MB8 LINE L1 -789 5389 4963 1070 189 18 53 chr2 34844715 34844942 -218411641 + MER20 DNA MER1_type 1 219 0 1975 154 10 0 chr2 34844984 34845290 -218411293 + AluSg SINE Alu 1 309 -1 455 242 19 31 chr2 34845395 34845556 -218411027 - L1M4 LINE L1 -6335 207 49 239 377 117 0 chr2 34845650 34845804 -218410779 - L2 LINE L2 0 3272 3101 * 744 264 84 13 chr2 34845780 34846007 -218410576 + MIR SINE MIR 8 250 -12 4233 141 112 35 chr2 34846064 34846831 -218409752 + LTR1B LTR ERV1 1 826 0 1723 158 8 0 chr2 34847234 34847500 -218409083 + AluJo SINE Alu 24 291 -21 792 166 72 0 chr2 34847631 34847770 -218408813 - MLT1A1 LTR MaLR -47 318 170 3767 142 75 41 chr2 34847896 34848627 -218407956 - L1MB8 LINE L1 -9 6169 5414 625 127 75 202 chr2 34848614 34848881 -218407702 + L1MB8 LINE L1 5906 6138 -40 * 2132 252 62 41 chr2 34848876 34849778 -218406805 - L1MB8 LINE L1 -1293 4853 3933 3033 185 42 10 chr2 34849962 34850695 -218405888 - L1MB8 LINE L1 -743 5435 4679 2165 64 3 11 chr2 34850866 34851176 -218405407 + AluY SINE Alu 1 308 0 810 92 0 21 chr2 34853342 34853484 -218403099 + (GA)n Simple_repeat Simple_repeat 2 140 0 1093 175 85 88 chr2 34853492 34853846 -218402737 - MLT2B1 LTR ERVL -55 359 7 2047 160 33 3 chr2 34853900 34854232 -218402351 - MER2 DNA MER2_type 0 344 3 2412 84 0 0 chr2 34854683 34854980 -218401603 + AluY SINE Alu 2 298 -13 2168 106 0 0 chr2 34854997 34855301 -218401282 + AluSq SINE Alu 2 305 0 3159 208 50 2 chr2 34855788 34856412 -218400171 - MLT1E1 LTR MaLR 0 654 1 1792 158 123 22 chr2 34857355 34857578 -218399005 - MER57A LTR ERV1 0 403 204 2115 178 66 82 chr2 34857578 34858140 -218398443 + MLT2B3 LTR ERVL 2 554 0 1792 158 123 22 chr2 34858140 34858282 -218398301 - MER57A LTR ERV1 -199 204 1 180 314 220 25 chr2 34858373 34858491 -218398092 - L3 LINE CR1 -45 1532 1392 1401 188 28 10 chr2 34858678 34859107 -218397476 + LTR32 LTR ERVL 8 470 -1 1372 146 82 167 chr2 34859200 34859666 -218396917 + MSTA LTR MaLR 1 426 -2 2315 77 0 27 chr2 34859809 34860107 -218396476 - AluY SINE Alu -21 290 1 712 225 234 11 chr2 34860111 34860466 -218396117 - L1MCb LINE L1 -4181 2383 1950 922 197 10 10 chr2 34860469 34860677 -218395906 - L1P LINE L1 -861 5285 5078 1824 175 44 6 chr2 34860680 34861022 -218395561 + L1PB4 LINE L1 5798 6152 -4 1701 153 10 17 chr2 34861118 34861406 -218395177 + AluJb SINE Alu 1 286 -26 2743 237 28 43 chr2 34861423 34861687 -218394896 - L1MCb LINE L1 -4781 1783 1516 2449 69 0 7 chr2 34861687 34861991 -218394592 - AluY SINE Alu -9 302 1 2743 237 28 43 chr2 34861991 34862450 -218394133 - L1MCb LINE L1 -5048 1516 1051 2040 122 0 43 chr2 34862450 34862754 -218393829 - AluSg SINE Alu -19 291 1 2743 237 28 43 chr2 34862754 34863250 -218393333 - L1MCb LINE L1 -5513 1051 570 974 108 102 0 chr2 34863766 34863932 -218392651 - pTR5 LTR ERV1 -2046 392 210 528 134 18 18 chr2 34863926 34864028 -218392555 - pTR5 LTR ERV1 -1219 1219 1118 4735 102 4 8 chr2 34864028 34864970 -218391613 - HERV17 LTR ERV1 0 8399 504 353 161 0 0 chr2 34864966 34865028 -218391555 - HERV17 LTR ERV1 -835 7564 7503 * 706 123 15 51 chr2 34865026 34865221 -218391362 - HERV17 LTR ERV1 -7726 900 713 375 305 37 53 chr2 34865456 34865646 -218390937 + MIR SINE MIR 76 262 0 240 65 43 94 chr2 34865709 34865847 -218390736 + (TATAA)n Simple_repeat Simple_repeat 5 135 0 231 36 0 0 chr2 34865893 34865921 -218390662 + (CA)n Simple_repeat Simple_repeat 2 29 0 2017 120 7 10 chr2 34865923 34866215 -218390368 - AluSq SINE Alu -22 291 1 240 303 0 40 chr2 34866345 34866444 -218390139 + (TA)n Simple_repeat Simple_repeat 1 95 0 206 135 11 56 chr2 34866546 34866635 -218389948 + T-rich Low_complexity Low_complexity 2 86 0 2311 97 0 3 chr2 34866658 34866966 -218389617 - AluY SINE Alu -3 308 2 198 0 0 0 chr2 34866966 34866988 -218389595 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2177 100 0 4 chr2 34866989 34867270 -218389313 - AluY SINE Alu -31 280 1 1498 137 69 4 chr2 34867697 34867974 -218388609 + L1MA8 LINE L1 5997 6291 0 257 337 11 0 chr2 34868802 34868897 -218387686 - MIR3 SINE MIR -23 185 90 631 201 54 49 chr2 34869312 34869496 -218387087 - MLT1B LTR MaLR -203 187 3 550 334 127 14 chr2 34869894 34870465 -218386118 - L2 LINE L2 0 3313 2682 210 143 0 0 chr2 34870754 34870789 -218385794 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 1549 103 0 5 chr2 34870947 34871170 -218385413 + AluSg/x SINE Alu 79 300 0 36 40 0 0 chr2 34871468 34871518 -218385065 + AT_rich Low_complexity Low_complexity 1 50 0 1454 202 58 17 chr2 34872071 34872433 -218384150 - Charlie4a DNA MER1_type -124 384 8 196 294 86 68 chr2 34873230 34873393 -218383190 + L3 LINE CR1 1411 1576 -1 3758 95 12 18 chr2 34874275 34874789 -218381794 - MER9 LTR ERVK 0 511 1 7750 114 3 3 chr2 34874789 34876221 -218380362 - HERVK9 LTR ERVK 0 7969 4582 1941 52 0 0 chr2 34876220 34876451 -218380132 - HERVK9 LTR ERVK -1975 3941 3711 * 22272 74 1 6 chr2 34876451 34879251 -218377332 - HERVK9 LTR ERVK -3130 2786 1 4011 104 0 4 chr2 34879251 34879762 -218376821 - MER9 LTR ERVK 0 511 3 2302 89 0 3 chr2 34880351 34880655 -218375928 - AluY SINE Alu -8 303 1 21 0 0 0 chr2 34880730 34880751 -218375832 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr2 34881145 34881182 -218375401 + AT_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr2 34881438 34881476 -218375107 + AT_rich Low_complexity Low_complexity 1 38 0 252 86 0 0 chr2 34881794 34881829 -218374754 + (CA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr2 34882454 34882476 -218374107 + AT_rich Low_complexity Low_complexity 1 22 0 1930 186 6 55 chr2 34882709 34883181 -218373402 - L1MB8 LINE L1 -12 6166 5718 822 222 8 62 chr2 34883189 34883328 -218373255 - L1MB8 LINE L1 -885 5261 5141 1853 122 20 54 chr2 34883328 34883494 -218373089 - AluSc SINE Alu -24 285 132 2428 60 10 0 chr2 34883494 34883792 -218372791 - AluY SINE Alu -10 301 1 1853 122 20 54 chr2 34883792 34883920 -218372663 - AluSc SINE Alu -177 132 1 822 222 8 62 chr2 34883920 34884037 -218372546 - L1MB8 LINE L1 -1005 5141 5019 216 331 39 58 chr2 34885329 34885483 -218371100 + MIR SINE MIR 64 214 -48 2282 78 0 0 chr2 34886540 34886851 -218369732 - AluY SINE Alu 0 311 1 404 315 150 23 chr2 34886992 34887338 -218369245 + MLT1C LTR MaLR 10 399 -68 1849 5 5 0 chr2 34887350 34887552 -218369031 - AluYa5 SINE Alu -3 308 106 2010 126 0 0 chr2 34887655 34887932 -218368651 - AluSx SINE Alu -35 277 1 510 221 123 21 chr2 34888045 34888280 -218368303 - L1MEc LINE L1 -4032 2364 2106 209 200 0 0 chr2 34888285 34888320 -218368263 + (TATATG)n Simple_repeat Simple_repeat 4 38 0 327 311 0 0 chr2 34888320 34888410 -218368173 + L1MC4 LINE L1 6614 6703 -1339 2377 78 0 29 chr2 34888417 34888724 -218367859 - AluY SINE Alu -13 298 1 311 322 88 9 chr2 34888747 34888974 -218367609 - L1MEc LINE L1 -4320 2076 1832 300 53 0 0 chr2 34889826 34889864 -218366719 + (TG)n Simple_repeat Simple_repeat 1 38 0 2231 98 0 0 chr2 34889950 34890236 -218366347 - AluY SINE Alu -17 294 9 343 268 94 0 chr2 34890392 34890530 -218366053 - MER103 DNA DNA -3 163 13 204 290 0 16 chr2 34890569 34890631 -218365952 + GA-rich Low_complexity Low_complexity 2 62 0 337 270 45 0 chr2 34892236 34892325 -218364258 + MIR3 SINE MIR 106 198 -10 832 229 92 4 chr2 34893228 34893455 -218363128 + MER58 DNA MER1_type 1 247 -2173 1785 145 0 25 chr2 34894199 34894481 -218362102 - AluJb SINE Alu -18 294 20 226 108 27 0 chr2 34894507 34894544 -218362039 - MSTB1 LTR MaLR 0 432 395 2055 125 0 3 chr2 34894545 34894832 -218361751 + AluSx SINE Alu 1 286 -26 319 322 0 0 chr2 34894843 34894933 -218361650 - L1MC4 LINE L1 -1339 6703 6614 * 325 304 0 0 chr2 34894856 34894948 -218361635 + L1MC4 LINE L1 6615 6706 -1336 1941 203 25 10 chr2 34894949 34895343 -218361240 - MSTB1 LTR MaLR -32 400 1 199 339 0 0 chr2 34896155 34896211 -218360372 + MIR SINE MIR 13 68 -194 308 262 73 61 chr2 34896397 34896561 -218360022 + MLT1J1 LTR MaLR 269 434 -12 339 366 68 26 chr2 34897085 34897276 -218359307 - MIR3 SINE MIR -4 204 6 210 250 0 0 chr2 34897448 34897488 -218359095 + MIR SINE MIR 217 256 -6 411 283 29 12 chr2 34897955 34898128 -218358455 + L1MEc LINE L1 1541 1716 -4680 815 251 52 55 chr2 34898211 34898538 -218358045 + MER58B DNA MER1_type 1 326 -15 2638 92 5 24 chr2 34898751 34899133 -218357450 - THE1C LTR MaLR 0 375 1 721 238 6 6 chr2 34899163 34899331 -218357252 - MLT1A2 LTR MaLR -1 373 206 848 232 89 6 chr2 34899461 34899797 -218356786 + L1MEc LINE L1 2680 3043 -3172 5715 143 28 8 chr2 34899801 34901238 -218355345 + L1MA5A LINE L1 4823 6287 -10 32 43 0 0 chr2 34901238 34901284 -218355299 + AT_rich Low_complexity Low_complexity 1 46 0 557 188 19 111 chr2 34901284 34901409 -218355174 + L1MEc LINE L1 3032 3122 -3093 1251 56 0 0 chr2 34901409 34901570 -218355013 + L1PA4 LINE L1 5992 6152 -3 557 188 19 111 chr2 34901570 34901705 -218354878 + L1MEc LINE L1 3122 3268 -2947 345 190 24 0 chr2 34901765 34901861 -218354722 + L1MEc LINE L1 2133 2270 -3918 840 48 0 0 chr2 34901862 34901967 -218354616 + (GGAA)n Simple_repeat Simple_repeat 2 106 0 216 67 0 0 chr2 34902171 34902201 -218354382 + (GGGGA)n Simple_repeat Simple_repeat 2 31 0 1069 233 117 4 chr2 34902232 34902692 -218353891 + L1MEc LINE L1 2231 2742 -3404 25 51 0 0 chr2 34902692 34902731 -218353852 + AT_rich Low_complexity Low_complexity 1 39 0 2259 72 4 0 chr2 34905123 34905438 -218351145 - AluY SINE Alu 0 316 1 247 235 15 0 chr2 34905464 34905532 -218351051 + L1PA16 LINE L1 6077 6145 -21 1425 259 4 28 chr2 34905677 34906140 -218350443 - L1ME3 LINE L1 -250 5912 5461 1266 253 106 13 chr2 34906151 34906674 -218349909 + L2 LINE L2 2128 2792 -522 864 166 0 14 chr2 34906678 34906823 -218349760 + FRAM SINE Alu 4 146 -30 579 276 136 59 chr2 34906843 34907219 -218349364 + L2 LINE L2 2771 3159 -154 1662 97 5 0 chr2 34907220 34907437 -218349146 + AluY SINE Alu 1 218 -93 253 62 42 0 chr2 34907442 34907490 -218349093 + (TA)n Simple_repeat Simple_repeat 2 51 0 325 319 109 29 chr2 34907539 34907677 -218348906 - MIR SINE MIR -111 151 3 2029 92 68 81 chr2 34908190 34908559 -218348024 - THE1B LTR MaLR 0 364 1 2167 110 0 3 chr2 34908809 34909100 -218347483 - AluSc SINE Alu -19 290 1 189 0 0 0 chr2 34909714 34909735 -218346848 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2065 73 0 8 chr2 34909742 34910002 -218346581 - AluSc SINE Alu -17 292 35 1443 201 3 7 chr2 34910063 34910361 -218346222 - L1MB3 LINE L1 -5 6178 5882 474 153 183 8 chr2 34910374 34910505 -218346078 + L1MB3 LINE L1 5713 5866 -308 31 0 0 0 chr2 34910665 34910696 -218345887 + AT_rich Low_complexity Low_complexity 1 31 0 851 147 0 16 chr2 34910783 34910912 -218345671 + FLAM_C SINE Alu 1 127 -16 678 331 145 13 chr2 34911011 34911404 -218345179 + L2 LINE L2 774 1218 -2096 2778 120 38 12 chr2 34911404 34911915 -218344668 + L1MA2 LINE L1 5711 6228 -76 22 0 0 0 chr2 34911915 34911937 -218344646 + AT_rich Low_complexity Low_complexity 1 22 0 1616 291 213 24 chr2 34911937 34913170 -218343413 + L2 LINE L2 1239 2703 -611 2037 265 60 27 chr2 34913184 34914100 -218342483 - HAL1 LINE L1 -592 1915 970 287 246 0 14 chr2 34914154 34914223 -218342360 - HAL1 LINE L1 -1670 837 770 2410 72 0 0 chr2 34914227 34914518 -218342065 + AluY SINE Alu 6 296 -15 1359 117 50 157 chr2 34914622 34914965 -218341618 - AluYb8 SINE Alu -2 306 1 435 19 0 0 chr2 34915076 34915128 -218341455 + (CA)n Simple_repeat Simple_repeat 2 53 0 246 100 0 0 chr2 34915416 34915432 -218341151 + (GA)n Simple_repeat Simple_repeat 1 16 -24 243 0 0 0 chr2 34915432 34915459 -218341124 + (TG)n Simple_repeat Simple_repeat 1 27 0 246 100 0 0 chr2 34915459 34915482 -218341101 + (GA)n Simple_repeat Simple_repeat 15 40 0 756 280 94 5 chr2 34915505 34915834 -218340749 - LTR16A1 LTR ERVL -2 455 114 327 109 4 0 chr2 34916260 34916320 -218340263 - Alu SINE Alu -253 46 1 211 132 0 26 chr2 34916373 34916411 -218340172 + (GAA)n Simple_repeat Simple_repeat 1 37 0 284 194 97 0 chr2 34917435 34917497 -218339086 - MLT2D LTR ERVL -131 283 216 2287 77 10 0 chr2 34918019 34918319 -218338264 + AluY SINE Alu 1 303 -8 2201 105 0 41 chr2 34919236 34919550 -218337033 - AluSq SINE Alu -12 301 1 288 0 0 0 chr2 34920904 34920936 -218335647 + (TA)n Simple_repeat Simple_repeat 2 33 0 2183 115 0 16 chr2 34920946 34921260 -218335323 - AluSc SINE Alu 0 309 1 1060 109 32 4 chr2 34921391 34921589 -218334994 - L1MA1 LINE L1 -170 6132 5925 1719 126 21 149 chr2 34921660 34922090 -218334493 + THE1C LTR MaLR 1 375 0 477 129 11 21 chr2 34922090 34922183 -218334400 + THE1C-int LTR MaLR 1 92 -1488 373 206 147 80 chr2 34923377 34923765 -218332818 - L1MC5 LINE L1 -38 7923 7510 21 0 0 0 chr2 34923818 34923839 -218332744 + AT_rich Low_complexity Low_complexity 1 21 0 1897 111 75 0 chr2 34923842 34924122 -218332461 + AluSx SINE Alu 1 301 -11 258 130 167 0 chr2 34924128 34924182 -218332401 - L1MA8 LINE L1 -21 6270 6208 267 178 0 68 chr2 34924184 34924257 -218332326 - L1MA8 LINE L1 -42 6249 6182 2279 110 3 0 chr2 34924312 34924621 -218331962 - AluY SINE Alu -1 310 1 558 201 36 0 chr2 34924678 34924817 -218331766 - L1MC5 LINE L1 -544 7417 7274 820 238 48 113 chr2 34924817 34925217 -218331366 - MLT1A2 LTR MaLR 0 374 1 501 198 15 86 chr2 34925328 34925525 -218331058 - L1MC5 LINE L1 -851 7110 6928 239 290 104 18 chr2 34925611 34925832 -218330751 - L1M4 LINE L1 -1805 4341 4102 1315 137 73 0 chr2 34925841 34926059 -218330524 - MER47A DNA MER2_type -4 362 129 975 167 33 0 chr2 34926059 34926239 -218330344 - Tigger1 DNA MER2_type 0 2418 2233 655 197 21 7 chr2 34926244 34926386 -218330197 - Tigger1 DNA MER2_type -2273 145 2 734 196 0 0 chr2 34926396 34926529 -218330054 - MER47A DNA MER2_type -233 133 1 346 292 58 25 chr2 34926625 34926902 -218329681 - L1M4 LINE L1 -2174 3972 3687 518 309 61 77 chr2 34926959 34927416 -218329167 - L1M4 LINE L1 -3008 3138 2689 1582 168 82 48 chr2 34927816 34928168 -218328415 + MLT1A1 LTR MaLR 2 365 0 858 277 111 21 chr2 34928509 34928888 -218327695 - MER77 LTR ERV1 -8 597 185 509 294 60 10 chr2 34929503 34929887 -218326696 - L1M4 LINE L1 -3092 3054 2652 664 338 85 25 chr2 34930654 34931127 -218325456 - L2 LINE L2 -1 3312 2812 29 47 0 0 chr2 34931242 34931285 -218325298 + AT_rich Low_complexity Low_complexity 1 43 0 892 255 119 54 chr2 34931508 34931791 -218324792 + MLT2D LTR ERVL 53 413 -107 2246 113 6 0 chr2 34931791 34932102 -218324481 - AluSp SINE Alu 0 313 1 892 255 119 54 chr2 34932102 34932174 -218324409 + MLT2D LTR ERVL 413 479 -41 195 218 0 0 chr2 34932175 34932276 -218324307 + (TA)n Simple_repeat Simple_repeat 1 101 0 422 230 11 48 chr2 34932289 34932476 -218324107 + (TA)n Simple_repeat Simple_repeat 1 180 0 2095 138 0 0 chr2 34932824 34933122 -218323461 - AluSc SINE Alu -11 298 1 6711 115 25 17 chr2 34933150 34934213 -218322370 + MER11C LTR ERVK 1 1071 0 213 214 146 79 chr2 34934282 34934371 -218322212 - MER5B DNA MER1_type 0 178 84 766 279 82 55 chr2 34934654 34935070 -218321513 + MLT1J1 LTR MaLR 17 443 -3 336 380 68 22 chr2 34935175 34935675 -218320908 - L2 LINE L2 -1018 2296 1774 394 256 44 7 chr2 34936743 34936880 -218319703 + MER69 DNA AcHobo 1 142 -1084 180 0 0 0 chr2 34937574 34937594 -218318989 + (TA)n Simple_repeat Simple_repeat 2 21 0 2297 104 0 3 chr2 34937594 34937892 -218318691 - AluSc SINE Alu -12 297 1 180 111 0 0 chr2 34938075 34938102 -218318481 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 1457 325 82 46 chr2 34938332 34939208 -218317375 - L2 LINE L2 -213 3059 2122 2330 83 0 7 chr2 34939208 34939508 -218317075 + AluY SINE Alu 1 298 -13 1457 325 82 46 chr2 34939508 34939906 -218316677 - L2 LINE L2 -1150 2122 1739 238 175 70 0 chr2 34940580 34940637 -218315946 + MIR SINE MIR 137 197 -65 2025 190 81 0 chr2 34943490 34943884 -218312699 - MSTB LTR MaLR 0 426 1 8529 172 48 5 chr2 34943886 34945467 -218311116 - MSTB-int LTR MaLR -2 1649 1 1889 164 71 22 chr2 34945467 34945538 -218311045 - MSTA LTR MaLR 0 428 362 6477 65 36 1 chr2 34945538 34946586 -218309997 + L1PA6 LINE L1 5074 6150 -4 1889 164 71 22 chr2 34946586 34946922 -218309661 - MSTA LTR MaLR -66 362 1 227 217 47 75 chr2 34947402 34947508 -218309075 - L1MC4a LINE L1 -1867 5941 5839 1625 185 0 30 chr2 34947527 34947825 -218308758 - AluJo SINE Alu -23 289 1 2097 119 0 0 chr2 34947873 34948151 -218308432 - AluSg SINE Alu -32 278 1 518 295 132 28 chr2 34948157 34948520 -218308063 - L1MC4a LINE L1 -1987 5821 5421 1934 168 14 0 chr2 34948573 34948864 -218307719 - AluSx SINE Alu -17 295 1 323 305 75 21 chr2 34948864 34949051 -218307532 - L1MC4a LINE L1 -801 5345 5149 2088 132 72 1 chr2 34949106 34949694 -218306889 + L1M2 LINE L1 4978 5611 -680 5594 112 42 1 chr2 34949694 34951412 -218305171 + L1PA12 LINE L1 4394 6168 0 2088 132 72 1 chr2 34951412 34951434 -218305149 + L1M2 LINE L1 5611 5630 -661 * 7144 172 78 17 chr2 34951426 34952898 -218303685 - L1 LINE L1 -1226 5880 4281 1818 122 15 92 chr2 34952898 34953235 -218303348 + AluSq SINE Alu 3 313 0 7144 172 78 17 chr2 34953235 34953540 -218303043 - L1 LINE L1 -2825 4281 3996 1524 250 34 17 chr2 34953593 34954309 -218302274 - L1 LINE L1 -4520 2517 1780 1937 251 47 41 chr2 34954312 34954993 -218301590 - L1 LINE L1 -6281 749 65 22 0 0 0 chr2 34955136 34955158 -218301425 + AT_rich Low_complexity Low_complexity 1 22 0 230 194 42 14 chr2 34955419 34955491 -218301092 + (TA)n Simple_repeat Simple_repeat 1 74 0 271 290 71 4 chr2 34955505 34955774 -218300809 - L1M4 LINE L1 -3128 3018 2732 2283 115 3 0 chr2 34956006 34956311 -218300272 - AluSg SINE Alu -4 306 1 1122 221 13 77 chr2 34956338 34956637 -218299946 - AluJo SINE Alu -30 282 3 205 194 0 0 chr2 34957132 34957168 -218299415 + T-rich Low_complexity Low_complexity 4 39 0 298 250 56 0 chr2 34957206 34957278 -218299305 - MER6B DNA MER2_type -5 205 130 23 33 0 0 chr2 34957279 34957309 -218299274 + AT_rich Low_complexity Low_complexity 1 30 0 4617 94 50 20 chr2 34957313 34958029 -218298554 - L1PA13 LINE L1 -4 6159 5422 3191 173 73 10 chr2 34958029 34958746 -218297837 + LTR1B LTR ERV1 8 785 0 3196 151 2 3 chr2 34958746 34959407 -218297176 - L1P4 LINE L1 -736 5432 4772 727 189 13 20 chr2 34959407 34959560 -218297023 - MER6B DNA MER2_type -58 152 1 231 217 0 0 chr2 34959758 34959818 -218296765 - HAL1b LINE L1 -593 755 696 261 210 16 16 chr2 34960114 34960176 -218296407 + MLT1K LTR MaLR 188 249 -339 191 125 25 0 chr2 34960211 34960251 -218296332 + GA-rich Low_complexity Low_complexity 2 42 0 267 31 0 0 chr2 34963267 34963299 -218293284 + (TG)n Simple_repeat Simple_repeat 2 33 0 432 299 51 10 chr2 34963339 34963524 -218293059 - MIR3 SINE MIR -3 205 14 2450 176 18 29 chr2 34963662 34964214 -218292369 - L1MA10 LINE L1 0 6334 5789 4570 257 64 37 chr2 34964240 34964940 -218291643 - L1MEc LINE L1 -3263 2952 2272 1369 220 24 30 chr2 34964940 34965236 -218291347 + AluJb SINE Alu 1 294 -18 4570 257 64 37 chr2 34965236 34965673 -218290910 - L1MEc LINE L1 -3943 2272 1848 2486 70 0 6 chr2 34965673 34965986 -218290597 + AluY SINE Alu 1 311 0 4570 257 64 37 chr2 34965986 34966194 -218290389 - L1MEc LINE L1 -4367 1848 1647 587 215 15 8 chr2 34966194 34966324 -218290259 - FLAM_A SINE Alu -2 131 1 4570 257 64 37 chr2 34966324 34967804 -218288779 - L1MEc LINE L1 -4568 1647 69 1812 98 55 4 chr2 34968375 34968631 -218287952 + AluSg SINE Alu 26 294 -16 22 35 0 0 chr2 34969114 34969143 -218287440 + AT_rich Low_complexity Low_complexity 1 29 0 471 263 165 10 chr2 34969209 34969403 -218287180 - MIR SINE MIR -27 235 12 206 233 117 0 chr2 34970258 34970318 -218286265 - MIR SINE MIR -77 185 119 208 370 108 0 chr2 34971520 34971655 -218284928 + MIR SINE MIR 23 176 -86 1677 118 19 11 chr2 34971660 34971930 -218284653 - MER1A DNA MER1_type 0 529 258 5861 171 25 16 chr2 34971931 34973275 -218283308 + L1PB1 LINE L1 3977 5361 -790 2211 116 0 13 chr2 34973275 34973577 -218283006 - AluSq SINE Alu -15 298 1 5861 171 25 16 chr2 34973577 34974368 -218282215 + L1PB1 LINE L1 5361 6143 -8 1623 157 12 0 chr2 34974375 34974630 -218281953 - MER1A DNA MER1_type -269 258 1 2143 98 4 0 chr2 34974930 34975207 -218281376 + AluY SINE Alu 1 278 -33 299 23 47 0 chr2 34975209 34975252 -218281331 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 245 234 16 16 chr2 34975777 34975841 -218280742 + L2 LINE L2 3209 3272 0 284 291 91 15 chr2 34975954 34976153 -218280430 + L2 LINE L2 2841 3054 -218 2261 217 82 4 chr2 34976166 34976479 -218280104 + MLT1E LTR MaLR 10 297 -296 390 42 0 0 chr2 34976479 34976527 -218280056 + (CATA)n Simple_repeat Simple_repeat 2 49 0 2261 217 82 4 chr2 34976527 34976753 -218279830 + MLT1E LTR MaLR 297 591 -2 263 286 29 0 chr2 34976873 34976943 -218279640 + MIR SINE MIR 74 145 -117 196 278 43 11 chr2 34977707 34977820 -218278763 - MIR3 SINE MIR 0 262 122 677 280 91 12 chr2 34977933 34978176 -218278407 + MIR SINE MIR 1 262 0 207 227 0 0 chr2 34978249 34978293 -218278290 - MIR SINE MIR -110 152 109 2349 77 3 3 chr2 34978329 34978629 -218277954 + AluY SINE Alu 1 300 -11 341 306 0 0 chr2 34979089 34979174 -218277409 - L2 LINE L2 0 3313 3229 555 304 254 25 chr2 34979470 34980412 -218276171 - L2 LINE L2 -428 2886 1730 607 274 59 59 chr2 34980546 34980834 -218275749 + MLT1I LTR MaLR 40 327 -82 783 218 16 71 chr2 34980973 34981225 -218275358 + MLT2B1 LTR ERVL 283 520 0 260 167 0 42 chr2 34981287 34981335 -218275248 - MIR SINE MIR -62 146 101 772 159 16 8 chr2 34983600 34983726 -218272857 - FLAM_C SINE Alu -16 127 1 249 33 0 0 chr2 34984232 34984262 -218272321 + (CA)n Simple_repeat Simple_repeat 2 31 0 214 323 20 10 chr2 34984590 34984689 -218271894 + L2 LINE L2 2211 2310 -1004 251 287 82 8 chr2 34984732 34984854 -218271729 + MLT2C1 LTR ERVL 69 199 -198 * 602 229 133 49 chr2 34984750 34985107 -218271476 + MLT1E2 LTR MaLR 59 429 -76 494 285 90 38 chr2 34985102 34985369 -218271214 + MER45C DNA AcHobo 320 600 -353 * 2408 96 3 0 chr2 34985776 34986077 -218270506 + AluSp SINE Alu 1 302 -11 217 247 103 62 chr2 34986144 34986241 -218270342 + MIR SINE MIR 43 143 -65 310 329 19 19 chr2 34988493 34988654 -218267929 - MLT1J2 LTR MaLR -22 428 268 2535 51 19 0 chr2 34988752 34989065 -218267518 + L1PA5 LINE L1 5828 6146 -8 197 404 43 11 chr2 34989209 34989303 -218267280 - L2 LINE L2 -29 3243 3147 321 286 53 8 chr2 34989789 34989922 -218266661 - L1ME4a LINE L1 -1 6120 5982 2451 212 29 27 chr2 34990958 34991511 -218265072 + MLT2B3 LTR ERVL 1 554 0 522 256 28 17 chr2 34991766 34991942 -218264641 + MER5B DNA MER1_type 1 178 0 538 225 11 120 chr2 34992178 34992369 -218264214 - MER5B DNA MER1_type -8 170 1 22 0 0 0 chr2 34993598 34993620 -218262963 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 34994722 34994745 -218261838 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2406 95 0 0 chr2 34995229 34995534 -218261049 - AluSc SINE Alu -4 305 1 21 0 0 0 chr2 34996002 34996023 -218260560 + AT_rich Low_complexity Low_complexity 1 21 0 1975 121 0 0 chr2 34996449 34996713 -218259870 + AluSg SINE Alu 1 264 -46 221 0 35 0 chr2 34996713 34996742 -218259841 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 276 220 0 0 chr2 34997445 34997504 -218259079 - L2 LINE L2 0 3313 3255 339 285 152 7 chr2 34997670 34997821 -218258762 - MIR3 SINE MIR -6 202 30 338 305 26 63 chr2 34998140 34998330 -218258253 - MIR3 SINE MIR -3 205 23 1184 120 89 13 chr2 34998585 34998737 -218257846 + L1MA9 LINE L1 6069 6245 -67 207 0 0 0 chr2 34998737 34998760 -218257823 + (TA)n Simple_repeat Simple_repeat 2 24 0 1184 120 89 13 chr2 34998760 34998832 -218257751 + L1MA9 LINE L1 6245 6310 -2 2190 82 4 0 chr2 34999679 34999988 -218256595 - AluY SINE Alu 0 310 1 2530 80 0 0 chr2 34999988 35000299 -218256284 - AluY SINE Alu 0 311 1 180 0 0 0 chr2 35000466 35000486 -218256097 + (T)n Simple_repeat Simple_repeat 1 20 0 181 356 41 0 chr2 35000647 35000720 -218255863 - MIR SINE MIR -78 130 55 258 276 26 78 chr2 35001074 35001160 -218255423 - MIR SINE MIR -85 177 97 2422 71 0 10 chr2 35001160 35001468 -218255115 + AluY SINE Alu 1 305 -6 258 276 26 78 chr2 35001468 35001497 -218255086 - MIR SINE MIR -165 97 68 21 0 0 0 chr2 35002056 35002077 -218254506 + AT_rich Low_complexity Low_complexity 1 21 0 2504 67 0 0 chr2 35002998 35003298 -218253285 - AluSg1 SINE Alu -9 300 1 2098 112 3 10 chr2 35003539 35003834 -218252749 + AluSx SINE Alu 1 293 -19 502 211 116 60 chr2 35004198 35004373 -218252210 - MER5A DNA MER1_type 0 189 4 267 245 75 31 chr2 35004509 35004607 -218251976 - MIR SINE MIR -65 143 39 328 317 75 60 chr2 35004727 35004926 -218251657 + HAL1 LINE L1 46 247 -2260 532 176 9 76 chr2 35005514 35005649 -218250934 - L1MB4 LINE L1 -29 6151 6026 2355 86 3 3 chr2 35005649 35005951 -218250632 + AluY SINE Alu 1 302 -9 532 176 9 76 chr2 35005951 35005974 -218250609 - L1MB4 LINE L1 -154 6026 6003 1884 186 52 31 chr2 35005976 35006423 -218250160 - L1MB4 LINE L1 -354 5830 5375 1971 110 92 7 chr2 35006512 35006793 -218249790 - AluSg SINE Alu -5 305 1 23 0 0 0 chr2 35007246 35007269 -218249314 + AT_rich Low_complexity Low_complexity 1 23 0 2503 144 18 38 chr2 35007721 35007781 -218248802 + Tigger2a DNA MER2_type 1 61 -2647 2307 70 0 55 chr2 35007781 35008108 -218248475 - AluY SINE Alu -2 309 1 2503 144 18 38 chr2 35008108 35008490 -218248093 + Tigger2a DNA MER2_type 61 434 0 393 282 141 37 chr2 35008540 35008733 -218247850 + MIR SINE MIR 16 224 -38 977 175 105 15 chr2 35008737 35008937 -218247646 - MER20 DNA MER1_type -1 218 1 21113 153 41 8 chr2 35009408 35013905 -218242678 - L1 LINE L1 -2892 4673 16 434 297 47 0 chr2 35014395 35014523 -218242060 + MIR3 SINE MIR 68 201 -7 568 188 30 10 chr2 35015271 35015372 -218241211 + FRAM SINE Alu 47 149 -27 978 47 78 0 chr2 35016047 35016176 -218240407 - MER85 DNA T2_type 0 139 1 322 219 49 0 chr2 35016917 35016999 -218239584 + LTR50 LTR ERVL 710 795 0 391 276 41 0 chr2 35017563 35017686 -218238897 + MER58B DNA MER1_type 211 338 -3 539 208 0 0 chr2 35017742 35017838 -218238745 - MER58A DNA MER1_type -10 97 2 2642 137 38 13 chr2 35018785 35019260 -218237323 - Tigger1 DNA MER2_type -2 2416 1930 2519 123 21 9 chr2 35019257 35019689 -218236894 - Tigger1 DNA MER2_type -1291 1127 691 * 3973 116 44 54 chr2 35019697 35020404 -218236179 - MER4E LTR ERV1 -61 718 17 2239 125 0 0 chr2 35020404 35020701 -218235882 + AluSg SINE Alu 1 297 -13 3973 116 44 54 chr2 35020701 35020718 -218235865 - MER4E LTR ERV1 -762 17 1 3627 160 19 25 chr2 35020718 35021412 -218235171 - Tigger1 DNA MER2_type -1728 690 1 792 187 21 16 chr2 35021429 35021616 -218234967 - MER53 DNA DNA -1 188 1 1937 154 20 3 chr2 35021664 35021969 -218234614 + AluSx SINE Alu 1 310 -2 417 293 47 54 chr2 35022097 35022350 -218234233 + MIR SINE MIR 4 250 -12 184 327 0 18 chr2 35023137 35023192 -218233391 - L2 LINE L2 -194 3078 3025 440 151 0 0 chr2 35024464 35024550 -218232033 - MER2 DNA MER2_type -136 209 124 1271 106 11 6 chr2 35024550 35024729 -218231854 + AluSg/x SINE Alu 125 304 -8 635 205 16 0 chr2 35024730 35024857 -218231726 - MER2 DNA MER2_type -216 129 1 1484 228 11 76 chr2 35025655 35025762 -218230821 + Zaphod DNA AcHobo 8 120 -3911 4162 161 52 2 chr2 35025762 35026555 -218230028 + L1MA8 LINE L1 5442 6273 -18 1484 228 11 76 chr2 35026555 35026828 -218229755 + Zaphod DNA AcHobo 120 363 -3668 326 247 67 40 chr2 35026848 35026998 -218229585 - MLT2E LTR ERVL 0 628 475 310 348 7 14 chr2 35027164 35027302 -218229281 - MLT2E LTR ERVL -459 169 33 403 75 0 0 chr2 35027749 35027802 -218228781 + Charlie3 DNA MER1_type 2650 2702 -8 1938 177 3 23 chr2 35027870 35028214 -218228369 - MER1B DNA MER1_type 0 337 1 1758 299 62 22 chr2 35028245 35029581 -218227002 - ERVL LTR ERVL -1462 4302 2817 399 247 0 0 chr2 35029583 35029676 -218226907 - MER58C DNA MER1_type -1 214 122 359 207 37 0 chr2 35029704 35029786 -218226797 - MER58C DNA MER1_type -85 130 46 811 263 57 32 chr2 35029812 35029972 -218226611 - MER5C DNA MER1_type 0 324 170 2315 76 7 0 chr2 35029972 35030261 -218226322 + AluY SINE Alu 5 295 -16 252 0 0 0 chr2 35030262 35030290 -218226293 + (TA)n Simple_repeat Simple_repeat 1 28 0 811 263 57 32 chr2 35030290 35030443 -218226140 - MER5C DNA MER1_type -153 171 1 426 316 75 0 chr2 35030444 35030618 -218225965 - ERVL LTR ERVL -2943 2821 2635 561 292 85 6 chr2 35030647 35030918 -218225665 - ERVL LTR ERVL -2922 2563 2300 1976 131 7 10 chr2 35031504 35031809 -218224774 - AluSx SINE Alu -8 304 1 354 275 11 0 chr2 35032148 35032239 -218224344 + Zaphod DNA AcHobo 3939 4030 -1 450 331 22 0 chr2 35032777 35032913 -218223670 - MIR3 SINE MIR -50 158 20 183 80 0 0 chr2 35033083 35033108 -218223475 + (CA)n Simple_repeat Simple_repeat 2 26 0 704 206 38 16 chr2 35034863 35035047 -218221536 + MER53 DNA DNA 1 188 -1 500 293 63 29 chr2 35035642 35035848 -218220735 - MIR SINE MIR -10 252 42 290 250 125 21 chr2 35036343 35036439 -218220144 - L2 LINE L2 -9 3263 3158 4455 189 31 17 chr2 35037902 35038642 -218217941 - L1MB8 LINE L1 -5 6173 5410 438 20 0 0 chr2 35038642 35038693 -218217890 + (TG)n Simple_repeat Simple_repeat 2 52 0 4455 189 31 17 chr2 35038693 35039203 -218217380 - L1MB8 LINE L1 -768 5410 4909 1212 235 32 50 chr2 35039473 35039568 -218217015 - MLT1A1 LTR MaLR -2 363 268 4452 48 67 0 chr2 35039568 35040135 -218216448 - L1PA5 LINE L1 -5 6149 5545 1212 235 32 50 chr2 35040135 35040379 -218216204 - MLT1A1 LTR MaLR -97 268 30 22 56 0 0 chr2 35040773 35040809 -218215774 + AT_rich Low_complexity Low_complexity 1 36 0 4615 162 69 15 chr2 35040812 35042359 -218214224 - L1MA8 LINE L1 -25 6266 4598 2292 48 10 7 chr2 35042359 35042650 -218213933 + L1PA5 LINE L1 5857 6148 -6 4615 162 69 15 chr2 35042650 35042950 -218213633 - L1MA8 LINE L1 -1693 4598 4316 2434 72 0 3 chr2 35043139 35043444 -218213139 + AluY SINE Alu 1 304 -7 4619 130 9 16 chr2 35043623 35044371 -218212212 - L1PA13 LINE L1 -2 6161 5419 626 93 0 10 chr2 35044371 35044468 -218212115 - L1MA8 LINE L1 -1812 4334 4239 548 264 69 44 chr2 35044500 35044818 -218211765 - Charlie2 DNA MER1_type -559 2303 1978 1105 230 113 2 chr2 35044871 35045297 -218211286 + Charlie2 DNA MER1_type 2317 2789 -73 2329 83 10 3 chr2 35045297 35045598 -218210985 - AluY SINE Alu -6 305 3 1310 237 191 49 chr2 35045951 35046058 -218210525 + L1MDa LINE L1 2530 2620 -3920 1822 144 31 10 chr2 35046058 35046350 -218210233 - AluSx SINE Alu -12 300 3 1310 237 191 49 chr2 35046350 35047118 -218209465 + L1MDa LINE L1 2620 3529 -3011 921 287 115 13 chr2 35047142 35047300 -218209283 + L1MDa LINE L1 3571 3712 -2828 2231 118 0 3 chr2 35047300 35047613 -218208970 + AluSx SINE Alu 1 312 0 921 287 115 13 chr2 35047613 35047862 -218208721 + L1MDa LINE L1 3712 3934 -2606 3462 170 74 12 chr2 35047862 35048526 -218208057 - MER44D DNA MER2_type 0 705 1 921 287 115 13 chr2 35048526 35048726 -218207857 + L1MDa LINE L1 3934 4241 -2299 360 0 0 0 chr2 35048813 35048853 -218207730 + (CA)n Simple_repeat Simple_repeat 2 41 0 778 291 47 0 chr2 35049018 35049231 -218207352 + MER58A DNA MER1_type 2 224 0 834 299 70 80 chr2 35049250 35049908 -218206675 + L2 LINE L2 2437 3148 -165 216 0 0 0 chr2 35050058 35050082 -218206501 + (TG)n Simple_repeat Simple_repeat 1 24 0 1321 98 0 0 chr2 35050429 35050602 -218205981 - AluSp SINE Alu -9 304 132 189 0 0 0 chr2 35051831 35051852 -218204731 + (TA)n Simple_repeat Simple_repeat 1 21 0 3612 45 7 0 chr2 35051852 35052298 -218204285 - L1PA5 LINE L1 -5 6149 5701 206 351 91 0 chr2 35052760 35052837 -218203746 - MIR SINE MIR -163 99 16 389 291 25 49 chr2 35053079 35053282 -218203301 - L2 LINE L2 -4 3309 3112 1060 274 28 3 chr2 35053307 35053592 -218202991 - LTR16A LTR ERVL -1 449 158 187 285 77 54 chr2 35053624 35053754 -218202829 - L2 LINE L2 -1515 1799 1667 2107 156 52 31 chr2 35054394 35054936 -218201647 - MLT2A2 LTR ERVL 0 554 1 1214 336 97 28 chr2 35055018 35056142 -218200441 - L2 LINE L2 -1 3312 2097 758 270 66 37 chr2 35056227 35056388 -218200195 - MIR SINE MIR 0 262 90 1773 200 5 19 chr2 35056388 35056758 -218199825 + MLT1A1 LTR MaLR 1 365 0 758 270 66 37 chr2 35056758 35056837 -218199746 - MIR SINE MIR -172 90 15 1191 252 96 26 chr2 35057488 35058160 -218198423 + LTR50 LTR ERVL 1 795 0 1732 207 39 0 chr2 35058233 35058590 -218197993 - MLT1E1 LTR MaLR -281 373 3 2296 144 59 12 chr2 35059606 35060015 -218196568 - MSTA LTR MaLR 0 428 1 232 349 28 0 chr2 35061877 35061983 -218194600 + MER5B DNA MER1_type 19 127 -51 2532 240 71 62 chr2 35062027 35063263 -218193320 - L1MC5 LINE L1 -57 7904 6658 * 6385 148 27 4 chr2 35063261 35064522 -218192061 - L1MC1 LINE L1 -19 6314 5023 783 321 144 24 chr2 35064666 35065165 -218191418 + MLT1G1 LTR MaLR 1 559 -36 488 201 39 26 chr2 35065195 35065211 -218191372 - L1MA10 LINE L1 0 6334 6319 2448 214 33 86 chr2 35065211 35065893 -218190690 - L1ME1 LINE L1 -5 6161 5532 2316 57 54 3 chr2 35065893 35066189 -218190394 + AluY SINE Alu 1 311 0 2448 214 33 86 chr2 35066189 35066464 -218190119 - L1ME1 LINE L1 -634 5532 5244 201 138 0 0 chr2 35066756 35066785 -218189798 + (TC)n Simple_repeat Simple_repeat 2 30 0 14024 127 46 14 chr2 35066877 35069220 -218187363 + Tigger1 DNA MER2_type 1 2418 0 408 335 78 52 chr2 35069618 35070039 -218186544 - HAL1b LINE L1 -878 470 39 27 0 0 0 chr2 35070757 35070784 -218185799 + AT_rich Low_complexity Low_complexity 1 27 0 5014 39 0 15 chr2 35070784 35071397 -218185186 - L1PA5 LINE L1 -19 6135 5532 203 279 33 16 chr2 35071711 35071772 -218184811 + MER5B DNA MER1_type 111 172 -6 280 250 56 83 chr2 35071795 35071939 -218184644 + MIR SINE MIR 77 216 -46 186 103 0 0 chr2 35072290 35072319 -218184264 + (CAA)n Simple_repeat Simple_repeat 1 29 0 768 256 122 89 chr2 35073385 35073447 -218183136 + MLT1J LTR MaLR 2 60 -451 2349 85 0 16 chr2 35073447 35073763 -218182820 - AluY SINE Alu 0 311 1 768 256 122 89 chr2 35073763 35074185 -218182398 + MLT1J LTR MaLR 60 502 -9 384 261 197 14 chr2 35074407 35074549 -218182034 - MER5A DNA MER1_type -3 186 19 2049 143 3 0 chr2 35075494 35075794 -218180789 - AluSx SINE Alu -11 301 1 420 359 62 48 chr2 35075822 35076382 -218180201 - L1MEc LINE L1 -4207 2189 1622 446 240 41 36 chr2 35076383 35076546 -218180037 - LTR40c LTR ERVL -155 310 164 432 0 0 0 chr2 35076546 35076594 -218179989 + (CA)n Simple_repeat Simple_repeat 2 49 0 1233 122 89 24 chr2 35077084 35077331 -218179252 - L1MA8 LINE L1 -4 6287 6025 1888 179 48 68 chr2 35078441 35078956 -218177627 + MLT1D LTR MaLR 1 505 0 37 23 0 0 chr2 35079223 35079267 -218177316 + AT_rich Low_complexity Low_complexity 1 44 0 1337 265 71 6 chr2 35079780 35080131 -218176452 - MLT1A2 LTR MaLR 0 374 1 273 277 181 58 chr2 35080381 35080536 -218176047 - MER5A DNA MER1_type -1 188 15 320 264 55 0 chr2 35080639 35080730 -218175853 + MER5A DNA MER1_type 17 112 -77 193 321 117 36 chr2 35080844 35080981 -218175602 + MER5B DNA MER1_type 31 178 0 1971 219 46 67 chr2 35082435 35082656 -218173927 + MLT2B3 LTR ERVL 1 225 -329 2251 105 36 33 chr2 35082656 35083019 -218173564 - THE1B LTR MaLR 0 364 1 1971 219 46 67 chr2 35083019 35083363 -218173220 + MLT2B3 LTR ERVL 225 554 0 5871 38 6 0 chr2 35084712 35085424 -218171159 - L1PA4 LINE L1 0 6155 5440 694 138 121 0 chr2 35086000 35086116 -218170467 + AluJo SINE Alu 5 134 -178 2136 113 34 0 chr2 35086795 35087088 -218169495 - AluSq SINE Alu -4 309 7 1659 116 0 40 chr2 35087087 35087337 -218169246 - AluSp SINE Alu -73 240 1 * 234 0 0 0 chr2 35089099 35089125 -218167458 + (T)n Simple_repeat Simple_repeat 1 26 0 1581 41 0 21 chr2 35089431 35089625 -218166958 - SVA Other Other 0 1386 1197 244 47 23 23 chr2 35189663 35189706 -218066877 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1782 169 0 10 chr2 35189716 35190006 -218066577 - AluJo SINE Alu -25 287 1 2784 68 0 8 chr2 35190083 35190451 -218066132 - L1PA13 LINE L1 -19 6144 5780 929 258 73 21 chr2 35190492 35190918 -218065665 - L1M4 LINE L1 -2164 3982 3535 430 262 86 64 chr2 35191068 35191381 -218065202 - L1M4 LINE L1 -2652 3494 3175 372 253 116 47 chr2 35192875 35193065 -218063518 + L2 LINE L2 3109 3311 -2 600 273 44 34 chr2 35193241 35193446 -218063137 - MER63A DNA MER1_type 0 210 4 2220 113 0 0 chr2 35194140 35194433 -218062150 + AluSq SINE Alu 1 293 -20 2078 116 7 0 chr2 35194733 35195017 -218061566 + AluSp SINE Alu 3 288 -25 261 282 129 0 chr2 35195271 35195356 -218061227 + MIR SINE MIR 59 154 -108 614 272 0 0 chr2 35195438 35195574 -218061009 - MIR SINE MIR -88 174 39 251 376 10 0 chr2 35196577 35196678 -218059905 + L1MEd LINE L1 622 723 -5482 409 288 83 72 chr2 35196722 35197255 -218059328 + L1MEd LINE L1 790 1287 -4918 285 271 42 96 chr2 35197271 35197502 -218059081 + L1MEd LINE L1 1300 1503 -4712 453 36 0 0 chr2 35197502 35197557 -218059026 + (CA)n Simple_repeat Simple_repeat 1 55 0 285 271 42 96 chr2 35197557 35197709 -218058874 + L1MEd LINE L1 1503 1662 -4553 226 176 20 0 chr2 35197946 35197997 -218058586 + L1MEd LINE L1 2030 2081 -4315 310 286 12 0 chr2 35197998 35198082 -218058501 + (TA)n Simple_repeat Simple_repeat 2 86 0 477 331 22 7 chr2 35198610 35198879 -218057704 + L1M4 LINE L1 4906 5178 -968 401 326 160 16 chr2 35199836 35200149 -218056434 - L2 LINE L2 0 3313 2956 404 276 198 37 chr2 35200202 35200445 -218056138 - L2 LINE L2 -459 2855 2574 267 218 69 30 chr2 35201917 35202018 -218054565 - L1ME LINE L1 -239 5882 5778 298 346 43 21 chr2 35202038 35202226 -218054357 - MIR SINE MIR -18 244 53 2190 56 0 4 chr2 35202534 35202800 -218053783 - AluY SINE Alu -12 299 35 321 321 36 9 chr2 35203315 35203427 -218053156 - HAL1b LINE L1 -673 675 561 254 95 24 0 chr2 35203791 35203833 -218052750 + (TA)n Simple_repeat Simple_repeat 1 43 0 322 305 39 123 chr2 35204116 35204523 -218052060 - L2 LINE L2 0 3313 2941 4970 46 10 1 chr2 35204892 35205575 -218051008 + L1PA6 LINE L1 5203 5890 -264 1453 88 88 0 chr2 35205753 35205969 -218050614 + L1PA6 LINE L1 5917 6151 -3 2127 120 7 3 chr2 35206211 35206511 -218050072 + AluSx SINE Alu 1 301 -11 1148 153 31 0 chr2 35206567 35206763 -218049820 - Tigger3b DNA MER2_type -751 480 279 2425 133 77 12 chr2 35206768 35207173 -218049410 + MSTB1 LTR MaLR 2 432 0 1437 181 25 25 chr2 35207175 35207457 -218049126 - Tigger3b DNA MER2_type -949 282 1 706 224 58 5 chr2 35207457 35207662 -218048921 - L1ME2 LINE L1 -262 5902 5687 196 241 19 74 chr2 35208697 35208751 -218047832 + L2 LINE L2 3189 3239 -74 2037 156 47 3 chr2 35208761 35209126 -218047457 - L1PB4 LINE L1 -12 6144 5764 189 74 0 0 chr2 35209681 35209708 -218046875 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 468 319 59 13 chr2 35211225 35211463 -218045120 + HERVL LTR ERVL 1106 1354 -3642 529 352 56 27 chr2 35211482 35212080 -218044503 + HERVL LTR ERVL 1520 2101 -3553 288 310 177 0 chr2 35212183 35212341 -218044242 + LTR16A1 LTR ERVL 266 451 -6 207 0 0 0 chr2 35213191 35213214 -218043369 + (TG)n Simple_repeat Simple_repeat 1 23 0 241 254 14 14 chr2 35213214 35213278 -218043305 + GA-rich Low_complexity Low_complexity 6 72 0 696 284 121 26 chr2 35213710 35214023 -218042560 + MLT1J LTR MaLR 3 345 -166 5101 24 2 2 chr2 35214040 35214665 -218041918 - L1PA3 LINE L1 -752 5394 4770 6302 28 21 0 chr2 35214665 35215403 -218041180 + L1PA3 LINE L1 5397 6155 0 2115 114 3 10 chr2 35215810 35216109 -218040474 - AluSq SINE Alu -16 297 1 23 0 0 0 chr2 35216227 35216250 -218040333 + AT_rich Low_complexity Low_complexity 1 23 0 239 340 0 11 chr2 35216652 35216746 -218039837 + A-rich Low_complexity Low_complexity 4 96 0 206 128 26 0 chr2 35217496 35217535 -218039048 + (TG)n Simple_repeat Simple_repeat 2 41 0 479 322 56 6 chr2 35217761 35217941 -218038642 - MIR SINE MIR -51 211 23 792 192 37 44 chr2 35217942 35218339 -218038244 + L1MC3 LINE L1 6762 7160 -625 2345 87 0 10 chr2 35218339 35218651 -218037932 + AluSc SINE Alu 1 309 0 792 192 37 44 chr2 35218651 35219147 -218037436 + L1MC3 LINE L1 7160 7776 -9 1858 108 0 8 chr2 35219596 35219855 -218036728 - AluSq SINE Alu 0 313 57 184 290 10 80 chr2 35220391 35220491 -218036092 + MIR SINE MIR 120 212 -50 3190 177 38 11 chr2 35220582 35221209 -218035374 + LTR48B LTR ERV1 1 644 0 223 304 43 54 chr2 35223538 35223630 -218032953 + L2 LINE L2 3196 3286 -27 2448 82 0 0 chr2 35224086 35224392 -218032191 - AluY SINE Alu -5 306 1 204 40 0 0 chr2 35224987 35225012 -218031571 + (TG)n Simple_repeat Simple_repeat 2 26 0 24 0 0 0 chr2 35225660 35225684 -218030899 + AT_rich Low_complexity Low_complexity 1 24 0 2472 77 0 10 chr2 35225796 35226108 -218030475 - AluSc SINE Alu 0 309 1 1824 76 4 12 chr2 35227533 35227783 -218028800 + L1PA7 LINE L1 5906 6153 -1 216 0 0 0 chr2 35227970 35227994 -218028589 + (T)n Simple_repeat Simple_repeat 1 24 0 196 333 26 87 chr2 35228803 35228998 -218027585 - MIR3 SINE MIR -10 198 16 291 300 28 9 chr2 35229707 35229833 -218026750 + CT-rich Low_complexity Low_complexity 2 220 0 466 318 94 79 chr2 35229875 35230278 -218026305 + L2 LINE L2 1937 2332 -982 531 178 54 23 chr2 35230278 35230407 -218026176 + MER94 DNA DNA 2 134 0 466 318 94 79 chr2 35230407 35230829 -218025754 + L2 LINE L2 2332 2775 -539 25 31 0 0 chr2 35231007 35231039 -218025544 + AT_rich Low_complexity Low_complexity 1 32 0 230 234 47 16 chr2 35231828 35231892 -218024691 + MIR SINE MIR 20 85 -177 258 180 0 0 chr2 35232717 35232778 -218023805 + (TG)n Simple_repeat Simple_repeat 1 61 0 729 301 106 43 chr2 35233658 35234510 -218022073 + L2 LINE L2 2358 3275 -38 359 298 116 9 chr2 35235984 35236123 -218020460 - MIR SINE MIR -74 188 37 2386 69 3 7 chr2 35236523 35236829 -218019754 - AluY SINE Alu -6 305 1 327 266 0 0 chr2 35236910 35237023 -218019560 + (TG)n Simple_repeat Simple_repeat 1 113 0 407 304 0 0 chr2 35237734 35237826 -218018757 + MIR SINE MIR 1 92 -170 402 311 8 0 chr2 35238278 35238397 -218018186 + MER5A DNA MER1_type 4 123 -66 260 246 0 0 chr2 35238489 35238546 -218018037 + Charlie7 DNA MER1_type 38 94 -2518 270 85 51 17 chr2 35238632 35238691 -218017892 + (CATA)n Simple_repeat Simple_repeat 2 62 0 5112 89 18 5 chr2 35238704 35239446 -218017137 + L1MA1 LINE L1 5548 6298 -4 26 0 0 0 chr2 35239446 35239472 -218017111 + AT_rich Low_complexity Low_complexity 1 26 0 398 210 65 0 chr2 35240439 35240563 -218016020 + L1ME2 LINE L1 4453 4584 -1562 1874 184 35 11 chr2 35240930 35241306 -218015277 - MLT1B LTR MaLR 0 390 6 993 243 15 26 chr2 35241393 35241665 -218014918 + MLT1C LTR MaLR 15 283 -184 756 254 137 19 chr2 35241666 35242032 -218014551 + L1ME2 LINE L1 4688 5096 -1050 2239 233 61 48 chr2 35242040 35242829 -218013754 + L1ME2 LINE L1 5348 6146 -18 1226 165 65 4 chr2 35242864 35243094 -218013489 + L1MB5 LINE L1 464 707 -6782 2206 109 0 0 chr2 35243508 35243802 -218012781 + AluSc SINE Alu 1 294 -15 22 0 0 0 chr2 35244173 35244195 -218012388 + AT_rich Low_complexity Low_complexity 1 22 0 1261 205 54 37 chr2 35245482 35246052 -218010531 + L1MB5 LINE L1 3362 3941 -3624 * 4001 194 30 21 chr2 35246049 35246281 -218010302 + L1MB5 LINE L1 6427 6655 -938 1776 155 43 25 chr2 35246281 35246649 -218009934 - THE1C LTR MaLR 0 375 1 4001 194 30 21 chr2 35246649 35247519 -218009064 + L1MB5 LINE L1 6655 7542 -51 1414 275 78 5 chr2 35247691 35248117 -218008466 + LTR16B LTR ERVL 8 464 0 21 0 0 0 chr2 35249510 35249531 -218007052 + AT_rich Low_complexity Low_complexity 1 21 0 233 0 0 59 chr2 35251891 35251925 -218004658 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1179 142 0 17 chr2 35251956 35252132 -218004451 - AluSx SINE Alu -139 173 1 358 290 174 14 chr2 35252161 35252299 -218004284 - MER5A DNA MER1_type -20 169 10 830 167 93 7 chr2 35252332 35252482 -218004101 + MER46A DNA MER2_type 1 163 -73 322 333 0 37 chr2 35252486 35252621 -218003962 + MER5B DNA MER1_type 33 162 -16 248 313 90 22 chr2 35252732 35252866 -218003717 + MIR SINE MIR 72 214 -48 210 294 81 81 chr2 35252910 35253046 -218003537 + L2 LINE L2 3161 3296 -17 2051 112 44 0 chr2 35253070 35253366 -218003217 - AluSq SINE Alu -4 309 1 233 351 126 9 chr2 35254150 35254261 -218002322 + L2 LINE L2 3189 3312 -1 237 33 0 0 chr2 35254415 35254445 -218002138 + (TG)n Simple_repeat Simple_repeat 2 31 0 456 293 98 18 chr2 35254894 35255058 -218001525 - MIR3 SINE MIR -2 206 30 1939 102 0 8 chr2 35255507 35255771 -218000812 + AluSq SINE Alu 39 300 -13 346 320 202 15 chr2 35255799 35256002 -218000581 - MIR SINE MIR -18 244 4 334 332 114 0 chr2 35256202 35256395 -218000188 + MIR SINE MIR 47 261 -1 2330 104 0 0 chr2 35256484 35256792 -217999791 - AluSx SINE Alu -4 308 1 208 352 36 73 chr2 35257153 35257372 -217999211 + L2 LINE L2 2539 2749 -565 694 24 0 0 chr2 35257381 35257465 -217999118 + L1MA2 LINE L1 6213 6296 -8 1922 126 13 13 chr2 35257539 35257848 -217998735 - AluSx SINE Alu 0 312 4 375 23 0 0 chr2 35257992 35258036 -217998547 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2335 57 0 0 chr2 35258037 35258385 -217998198 - AluY SINE Alu 0 348 1 711 264 26 79 chr2 35258512 35258777 -217997806 - MIR SINE MIR -5 257 7 288 339 153 8 chr2 35258850 35258974 -217997609 + L2 LINE L2 3127 3268 -4 387 306 45 65 chr2 35259851 35260050 -217996533 - L3 LINE CR1 -1 1576 1382 212 268 0 0 chr2 35260704 35260745 -217995838 - L2 LINE L2 -8 3264 3224 589 290 30 45 chr2 35260933 35261133 -217995450 - MIR SINE MIR -7 255 59 354 203 27 0 chr2 35263035 35263109 -217993474 + MIR SINE MIR 112 187 -75 2210 120 0 0 chr2 35263357 35263656 -217992927 - AluSx SINE Alu -13 299 1 351 241 0 36 chr2 35263890 35264002 -217992581 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 882 244 64 38 chr2 35264002 35264061 -217992522 - L1ME3 LINE L1 -26 6144 6088 237 65 0 0 chr2 35264061 35264092 -217992491 + (CA)n Simple_repeat Simple_repeat 1 31 0 882 244 64 38 chr2 35264092 35264369 -217992214 - L1ME3 LINE L1 -82 6088 5793 199 256 51 51 chr2 35264679 35264757 -217991826 + L2 LINE L2 3227 3304 -9 23 78 0 0 chr2 35265289 35265340 -217991243 + AT_rich Low_complexity Low_complexity 1 51 0 1424 234 84 42 chr2 35268876 35269438 -217987145 + LTR24B LTR ERV1 1 635 0 513 325 38 19 chr2 35270027 35270236 -217986347 - MIR SINE MIR -32 230 18 336 241 234 19 chr2 35273388 35273546 -217983037 - MIR SINE MIR -10 252 61 1592 299 143 21 chr2 35274489 35275394 -217981189 - HAL1 LINE L1 -1482 1025 11 750 262 159 56 chr2 35275948 35276464 -217980119 - MLT1G LTR MaLR -2 588 20 399 21 0 0 chr2 35276480 35276528 -217980055 + (CA)n Simple_repeat Simple_repeat 1 48 0 2155 104 0 3 chr2 35276596 35276894 -217979689 + AluSq SINE Alu 1 297 -16 186 333 105 9 chr2 35277316 35277421 -217979162 + MIR SINE MIR 77 191 -71 319 349 107 6 chr2 35278296 35278465 -217978118 + MIR SINE MIR 49 234 -28 641 92 10 0 chr2 35278506 35278604 -217977979 + (TCCC)n Simple_repeat Simple_repeat 1 99 0 189 171 0 0 chr2 35278607 35278642 -217977941 + CT-rich Low_complexity Low_complexity 3 37 0 441 218 87 91 chr2 35278667 35278942 -217977641 - L1MC5 LINE L1 -181 7780 7507 435 163 0 23 chr2 35278938 35279024 -217977559 - L1MD3 LINE L1 0 7995 7912 * 331 303 34 83 chr2 35279024 35279492 -217977091 + MER65A LTR ERV1 1 445 0 742 196 112 0 chr2 35279494 35279673 -217976910 - L1MD3 LINE L1 -82 7913 7715 565 220 70 59 chr2 35279793 35280066 -217976517 - L1MC5 LINE L1 -593 7368 7093 4490 170 32 22 chr2 35280216 35281094 -217975489 - L1MC2 LINE L1 -30 6314 5428 853 211 0 0 chr2 35281114 35281256 -217975327 - AluSg/x SINE Alu -37 273 132 1918 157 3 0 chr2 35281256 35281561 -217975022 - AluSx SINE Alu -6 306 1 1658 179 40 19 chr2 35281561 35282083 -217974500 - L1MC2 LINE L1 -743 5403 4914 1008 204 52 69 chr2 35282083 35282492 -217974091 + MLT1A1 LTR MaLR 1 363 -2 701 188 0 7 chr2 35282494 35282638 -217973945 - L1MC2 LINE L1 -1228 4918 4776 184 310 42 111 chr2 35282669 35282895 -217973688 + L3 LINE CR1 1050 1247 -330 2316 100 0 0 chr2 35282895 35283185 -217973398 + AluSx SINE Alu 1 290 -22 184 310 42 111 chr2 35283185 35283290 -217973293 + L3 LINE CR1 1247 1358 -219 2165 133 0 3 chr2 35283436 35283745 -217972838 + AluSx SINE Alu 3 310 -2 21 57 0 0 chr2 35285778 35285813 -217970770 + AT_rich Low_complexity Low_complexity 1 35 0 981 197 90 97 chr2 35287876 35288173 -217968410 + MER110A LTR ERV1 71 369 -99 2224 86 0 0 chr2 35288173 35288451 -217968132 + AluY SINE Alu 1 278 -33 369 0 0 0 chr2 35288451 35288492 -217968091 + (CAA)n Simple_repeat Simple_repeat 2 42 0 981 197 90 97 chr2 35288492 35288594 -217967989 + MER110A LTR ERV1 367 468 0 490 366 20 16 chr2 35289123 35289369 -217967214 + MIR SINE MIR 13 259 -3 208 339 117 44 chr2 35290091 35290271 -217966312 - MIR3 SINE MIR 0 208 16 434 281 55 70 chr2 35290956 35291212 -217965371 - L2 LINE L2 -655 2659 2408 605 324 39 26 chr2 35291380 35291689 -217964894 - L2 LINE L2 -1305 2009 1697 270 56 0 0 chr2 35292561 35292597 -217963986 + (CAA)n Simple_repeat Simple_repeat 1 36 0 619 328 43 21 chr2 35292780 35293106 -217963477 - L2 LINE L2 -1637 1677 1345 458 234 7 97 chr2 35293421 35293575 -217963008 - L2 LINE L2 -1 3312 3173 448 289 114 6 chr2 35293888 35294054 -217962529 - MIR SINE MIR -16 246 63 1994 113 6 3 chr2 35294346 35294657 -217961926 + AluSx SINE Alu 1 312 0 2277 102 0 6 chr2 35294741 35295055 -217961528 + AluSx SINE Alu 1 312 0 182 36 0 36 chr2 35295066 35295094 -217961489 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 642 284 115 82 chr2 35295393 35295560 -217961023 + L2 LINE L2 2590 2750 -563 2082 93 11 0 chr2 35295560 35295864 -217960719 + AluSp SINE Alu 1 307 0 642 284 115 82 chr2 35295864 35296372 -217960211 + L2 LINE L2 2750 3310 -3 21 0 0 0 chr2 35297314 35297335 -217959248 + AT_rich Low_complexity Low_complexity 1 21 0 588 317 65 40 chr2 35297962 35298391 -217958192 + L1MDa LINE L1 1036 1543 -4883 21 57 0 0 chr2 35298739 35298774 -217957809 + AT_rich Low_complexity Low_complexity 1 35 0 245 155 17 0 chr2 35299862 35299920 -217956663 + CT-rich Low_complexity Low_complexity 4 62 0 215 307 79 47 chr2 35300885 35301012 -217955571 + L2 LINE L2 2927 3057 -215 1109 255 82 51 chr2 35301257 35301783 -217954800 - L2 LINE L2 -1 3312 2756 2243 71 30 7 chr2 35301783 35302080 -217954503 - AluY SINE Alu -7 304 1 1109 255 82 51 chr2 35302080 35302135 -217954448 - L2 LINE L2 -557 2756 2704 232 364 36 7 chr2 35303435 35303575 -217953008 - MIR SINE MIR -116 146 3 180 298 48 0 chr2 35303906 35303990 -217952593 + L3 LINE CR1 634 721 -856 180 0 0 0 chr2 35303993 35304013 -217952570 + (TG)n Simple_repeat Simple_repeat 2 21 0 226 309 231 34 chr2 35304676 35304970 -217951613 + L3 LINE CR1 1094 1445 -132 26 50 0 0 chr2 35305912 35305952 -217950631 + AT_rich Low_complexity Low_complexity 1 40 0 27 29 0 0 chr2 35307392 35307426 -217949157 + AT_rich Low_complexity Low_complexity 1 34 0 637 50 0 0 chr2 35308988 35309068 -217947515 + MADE1 DNA Mariner 1 80 0 22 70 0 0 chr2 35309526 35309569 -217947014 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr2 35309654 35309677 -217946906 + AT_rich Low_complexity Low_complexity 1 23 0 386 68 108 40 chr2 35310018 35310092 -217946491 + MADE1 DNA Mariner 2 80 0 662 273 63 10 chr2 35310630 35310747 -217945836 - MER58A DNA MER1_type -2196 224 90 2435 76 0 0 chr2 35310747 35311050 -217945533 + AluY SINE Alu 1 303 -8 662 273 63 10 chr2 35311050 35311137 -217945446 - MER58A DNA MER1_type -2330 90 9 2056 117 0 0 chr2 35311820 35312102 -217944481 + AluSc SINE Alu 1 282 -27 180 0 0 0 chr2 35312105 35312125 -217944458 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 366 221 13 0 chr2 35312502 35312579 -217944004 + AluSg/x SINE Alu 197 274 -26 25 51 0 0 chr2 35312579 35312618 -217943965 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 35313273 35313303 -217943280 + AT_rich Low_complexity Low_complexity 1 30 0 184 288 61 0 chr2 35313986 35314052 -217942531 - L2 LINE L2 -649 2665 2596 743 172 0 8 chr2 35315797 35315931 -217940652 + FLAM_C SINE Alu 1 133 0 21 36 0 0 chr2 35316454 35316482 -217940101 + AT_rich Low_complexity Low_complexity 1 28 0 200 217 87 0 chr2 35316485 35316531 -217940052 - L2 LINE L2 -8 3305 3256 2442 30 40 3 chr2 35317709 35318008 -217938575 - AluY SINE Alu 0 311 2 270 0 0 0 chr2 35318142 35318172 -217938411 + (TG)n Simple_repeat Simple_repeat 2 31 0 1298 177 0 0 chr2 35318448 35318657 -217937926 + AluJo SINE Alu 87 295 -17 222 203 51 0 chr2 35318712 35318771 -217937812 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 21 57 0 0 chr2 35319344 35319379 -217937204 + AT_rich Low_complexity Low_complexity 1 35 0 558 191 8 23 chr2 35320671 35320802 -217935781 + L1PA15 LINE L1 6035 6163 -2 26 0 0 0 chr2 35321021 35321047 -217935536 + AT_rich Low_complexity Low_complexity 1 26 0 302 98 20 0 chr2 35321282 35321333 -217935250 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 24 53 0 0 chr2 35322561 35322599 -217933984 + AT_rich Low_complexity Low_complexity 1 38 0 1985 248 96 2 chr2 35322973 35323651 -217932932 + Charlie1 DNA MER1_type 5 2051 -710 293 214 0 22 chr2 35323661 35323750 -217932833 + GA-rich Low_complexity Low_complexity 4 90 0 317 254 15 0 chr2 35323753 35323820 -217932763 + MER21B LTR ERV1 26 93 -770 1828 226 139 62 chr2 35323839 35323891 -217932692 + MER21B LTR ERV1 19 66 -797 2679 14 0 0 chr2 35323891 35324185 -217932398 - AluY SINE Alu -17 294 1 1828 226 139 62 chr2 35324185 35324868 -217931715 + MER21B LTR ERV1 66 810 -53 1567 234 29 83 chr2 35324935 35325401 -217931182 + MER77 LTR ERV1 1 390 -172 2878 191 49 12 chr2 35325415 35326086 -217930497 + Charlie1 DNA MER1_type 2066 2761 0 234 0 0 0 chr2 35326746 35326772 -217929811 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 652 175 31 81 chr2 35327117 35327277 -217929306 - MER4D LTR ERV1 -717 155 4 1113 160 17 25 chr2 35327310 35327509 -217929074 - MER66-int LTR ERV1 -1062 7058 4350 301 179 224 0 chr2 35327483 35327550 -217929033 - MER66-int LTR ERV1 -4088 4032 3951 * 730 158 17 107 chr2 35327730 35327907 -217928676 - MER66-int LTR ERV1 -4174 3946 3786 353 260 63 8 chr2 35328044 35328171 -217928412 - MER66-int LTR ERV1 -2151 4180 4047 2059 181 63 94 chr2 35328172 35329569 -217927014 - MER66-int LTR ERV1 -2512 4164 1210 2425 177 15 9 chr2 35329572 35330035 -217926548 - MER66-int LTR ERV1 -220 1566 1101 671 260 11 88 chr2 35330220 35330505 -217926078 - MER66-int LTR ERV1 -3521 3155 2893 637 189 6 111 chr2 35330720 35330900 -217925683 - MER66-int LTR ERV1 -5760 916 756 1821 209 17 52 chr2 35331437 35331896 -217924687 - MER41B LTR ERV1 -36 599 157 253 136 23 34 chr2 35332210 35332298 -217924285 + (TA)n Simple_repeat Simple_repeat 2 88 0 24 32 0 0 chr2 35333070 35333101 -217923482 + AT_rich Low_complexity Low_complexity 1 31 0 1888 155 0 16 chr2 35333334 35333651 -217922932 - AluSx SINE Alu 0 312 1 839 188 0 0 chr2 35334443 35334581 -217922002 + FLAM_C SINE Alu 1 138 -5 418 237 0 59 chr2 35334952 35335070 -217921513 + L2 LINE L2 3203 3313 0 200 322 11 35 chr2 35335396 35335483 -217921100 - L2 LINE L2 -188 3084 3000 267 67 67 22 chr2 35336339 35336384 -217920199 - L1PA8A LINE L1 -494 5637 5591 468 262 61 65 chr2 35336978 35337257 -217919326 - LTR16B LTR ERVL 0 464 187 210 154 0 0 chr2 35337307 35337346 -217919237 + T-rich Low_complexity Low_complexity 2 40 0 1599 149 4 20 chr2 35337346 35337450 -217919133 - AluSq SINE Alu -62 251 147 5535 67 105 4 chr2 35337450 35338200 -217918383 + LTR12 LTR ERV1 1 826 0 1599 149 4 20 chr2 35338200 35338344 -217918239 - AluSq SINE Alu -166 147 7 554 278 53 60 chr2 35338647 35338928 -217917655 - HERV16 LTR ERVL -2964 2032 1754 297 167 0 0 chr2 35338987 35339041 -217917542 + CT-rich Low_complexity Low_complexity 1 54 0 361 91 0 0 chr2 35339185 35339240 -217917343 - MLT2A1 LTR ERVL 0 453 399 206 82 33 49 chr2 35339252 35339313 -217917270 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 2960 75 0 5 chr2 35339316 35339715 -217916868 - MLT2A1 LTR ERVL -47 397 1 1574 339 55 46 chr2 35339718 35341136 -217915447 - HERV16 LTR ERVL -3563 1433 3 815 264 94 37 chr2 35341138 35341573 -217915010 - LTR16B LTR ERVL 0 464 5 2261 79 0 4 chr2 35341647 35341960 -217914623 + AluY SINE Alu 5 316 0 273 189 0 40 chr2 35342203 35342277 -217914306 + MER103 DNA DNA 36 106 -60 189 0 0 0 chr2 35343726 35343747 -217912836 + (T)n Simple_repeat Simple_repeat 1 21 0 826 231 24 48 chr2 35344216 35344467 -217912116 - L1MC4 LINE L1 -1126 6916 6672 227 188 0 31 chr2 35344501 35344565 -217912018 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 1965 140 0 7 chr2 35345299 35345629 -217910954 - AluSx SINE Alu 0 328 1 290 279 26 32 chr2 35346335 35346525 -217910058 - L2 LINE L2 -2656 658 470 2115 113 3 0 chr2 35347343 35347627 -217908956 + AluSq SINE Alu 1 285 -28 24 32 0 0 chr2 35347627 35347658 -217908925 + AT_rich Low_complexity Low_complexity 1 31 0 600 134 75 118 chr2 35348455 35348504 -217908079 - MER53 DNA DNA -9 180 130 483 115 13 0 chr2 35348504 35348556 -217908027 - MADE1 DNA Mariner 0 80 25 1923 95 18 22 chr2 35348556 35348830 -217907753 + AluSc SINE Alu 37 309 0 483 115 13 0 chr2 35348830 35348855 -217907728 - MADE1 DNA Mariner -55 25 2 600 134 75 118 chr2 35348855 35348991 -217907592 - MER53 DNA DNA -59 130 3 23 0 0 0 chr2 35349269 35349292 -217907291 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 35349388 35349416 -217907167 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr2 35349529 35349555 -217907028 + AT_rich Low_complexity Low_complexity 1 26 0 374 381 9 5 chr2 35349817 35350040 -217906543 + L1MC/D LINE L1 5514 5737 -2071 31 44 0 0 chr2 35350150 35350195 -217906388 + AT_rich Low_complexity Low_complexity 1 45 0 616 281 101 10 chr2 35351247 35351446 -217905137 - MIR SINE MIR 0 262 46 248 218 109 0 chr2 35352344 35352399 -217904184 - L2 LINE L2 -3 3310 3250 1989 188 71 18 chr2 35352435 35352887 -217903696 + MER67D LTR ERV1 11 486 -28 183 280 0 0 chr2 35353818 35353868 -217902715 - L2 LINE L2 -426 2887 2838 186 244 0 0 chr2 35353911 35353952 -217902631 - MIR SINE MIR -176 86 46 746 187 107 8 chr2 35354161 35354423 -217902160 - L1MA2 LINE L1 -49 6255 5968 10362 174 16 35 chr2 35354523 35355021 -217901562 - L1MA2 LINE L1 -194 7529 7023 2179 119 53 19 chr2 35355021 35355382 -217901201 + THE1C LTR MaLR 3 375 0 10362 174 16 35 chr2 35355382 35357770 -217898813 - L1MA2 LINE L1 -700 7023 4628 552 141 0 0 chr2 35357770 35357862 -217898721 - AluSp/q SINE Alu 0 313 222 10362 174 16 35 chr2 35357862 35358273 -217898310 - L1MA2 LINE L1 -3095 4628 4210 1910 122 56 88 chr2 35358273 35358649 -217897934 - THE1B LTR MaLR 0 364 1 420 116 0 0 chr2 35358649 35358718 -217897865 - THE1B-int LTR MaLR 0 1580 1512 * 1855 105 21 0 chr2 35358713 35358998 -217897585 - THE1B-int LTR MaLR -1289 291 1 1915 161 27 35 chr2 35358998 35359253 -217897330 - THE1B LTR MaLR 0 364 111 2264 127 0 0 chr2 35359253 35359561 -217897022 - AluSx SINE Alu -4 308 1 1915 161 27 35 chr2 35359561 35359672 -217896911 - THE1B LTR MaLR -253 111 1 14303 161 134 45 chr2 35359672 35360288 -217896295 - L1MA2 LINE L1 -3351 4214 3654 2096 126 7 0 chr2 35360288 35360590 -217895993 - AluSc SINE Alu -5 304 1 14303 161 134 45 chr2 35360590 35361654 -217894929 - L1MA2 LINE L1 -3911 3654 2686 264 89 0 0 chr2 35361654 35361699 -217894884 - Alu SINE Alu -2 306 262 14303 161 134 45 chr2 35361699 35362895 -217893688 - L1MA2 LINE L1 -4879 2686 1598 2591 123 0 3 chr2 35362895 35363260 -217893323 - THE1B LTR MaLR 0 364 1 14303 161 134 45 chr2 35363260 35363356 -217893227 - L1MA2 LINE L1 -5967 1598 1512 1608 172 55 33 chr2 35363356 35363723 -217892860 + THE1C LTR MaLR 1 375 0 9259 139 12 47 chr2 35363727 35365361 -217891222 + THE1C-int LTR MaLR 5 1580 0 1596 154 199 8 chr2 35365362 35365547 -217891036 + MSTA LTR MaLR 2 150 -278 204 40 0 0 chr2 35365547 35365572 -217891011 + (TC)n Simple_repeat Simple_repeat 2 26 0 1596 154 199 8 chr2 35365572 35365743 -217890840 + MSTA LTR MaLR 150 426 -2 14303 161 134 45 chr2 35365743 35366565 -217890018 - L1MA2 LINE L1 -6054 1511 16 217 364 34 11 chr2 35368077 35368165 -217888418 - L2 LINE L2 -21 3292 3203 405 39 0 0 chr2 35368253 35368304 -217888279 + (TG)n Simple_repeat Simple_repeat 2 52 0 28 0 0 0 chr2 35368333 35368361 -217888222 + AT_rich Low_complexity Low_complexity 1 28 0 1724 229 154 12 chr2 35368693 35369186 -217887397 + MLT1F1 LTR MaLR 3 565 -2 567 301 24 45 chr2 35369560 35369806 -217886777 - L3 LINE CR1 -109 1468 1228 220 339 179 9 chr2 35369971 35370083 -217886500 - MIR SINE MIR -75 187 57 21 57 0 0 chr2 35370460 35370495 -217886088 + AT_rich Low_complexity Low_complexity 1 35 0 222 261 57 89 chr2 35371015 35371127 -217885456 + MIR SINE MIR 36 143 -119 2204 125 31 3 chr2 35371127 35371478 -217885105 + MER46B DNA MER2_type 1 236 0 222 261 57 89 chr2 35371478 35371522 -217885061 + MIR SINE MIR 143 187 -75 22 0 0 0 chr2 35371692 35371714 -217884869 + AT_rich Low_complexity Low_complexity 1 22 0 29501 116 12 58 chr2 35371759 35377762 -217878821 + L1P3 LINE L1 12 5725 -429 867 204 0 0 chr2 35377862 35378024 -217878559 + MER58B DNA MER1_type 176 337 -4 233 119 24 0 chr2 35378637 35378679 -217877904 + (TA)n Simple_repeat Simple_repeat 2 44 0 249 83 0 0 chr2 35378826 35378862 -217877721 + (TC)n Simple_repeat Simple_repeat 1 36 0 229 311 42 8 chr2 35379228 35379347 -217877236 + L2 LINE L2 47 169 -3145 1001 269 231 43 chr2 35379354 35379722 -217876861 + L2 LINE L2 337 634 -2680 1778 134 22 51 chr2 35379722 35380036 -217876547 - AluSx SINE Alu -7 305 1 1001 269 231 43 chr2 35380036 35380321 -217876262 + L2 LINE L2 634 1113 -2201 510 17 0 0 chr2 35381086 35381145 -217875438 + (A)n Simple_repeat Simple_repeat 1 59 0 615 178 123 0 chr2 35381148 35381294 -217875289 + L1MC2 LINE L1 6155 6318 -26 1948 145 0 43 chr2 35381566 35381935 -217874648 - AluJb SINE Alu 0 355 1 708 160 112 12 chr2 35383439 35383608 -217872975 + MER53 DNA DNA 1 186 -3 2275 88 0 26 chr2 35383832 35384137 -217872446 + AluY SINE Alu 1 297 -14 183 129 0 0 chr2 35384220 35384251 -217872332 + (TG)n Simple_repeat Simple_repeat 1 31 0 422 244 102 44 chr2 35385113 35385318 -217871265 - L1ME3A LINE L1 0 6170 5954 747 248 141 1 chr2 35385328 35385616 -217870967 - L1ME3A LINE L1 -265 5905 5572 3811 146 102 28 chr2 35386422 35387812 -217868771 + pTR5 LTR ERV1 741 2606 0 21 0 0 0 chr2 35388587 35388608 -217867975 + AT_rich Low_complexity Low_complexity 1 21 0 909 289 59 20 chr2 35388670 35389026 -217867557 + MLT1A2 LTR MaLR 1 370 -4 1069 103 11 6 chr2 35389174 35389349 -217867234 + (TTTC)n Simple_repeat Simple_repeat 1 176 0 1833 171 0 0 chr2 35389349 35389629 -217866954 - AluSx SINE Alu -32 280 1 493 244 48 163 chr2 35389736 35390129 -217866454 - L2 LINE L2 -1 3312 2965 623 283 90 13 chr2 35390181 35390414 -217866169 + MLT1G LTR MaLR 73 323 -267 2279 105 3 0 chr2 35390450 35390755 -217865828 + AluY SINE Alu 5 310 -1 418 210 60 0 chr2 35390770 35390870 -217865713 + MLT1G LTR MaLR 485 590 0 3351 281 157 28 chr2 35390922 35392476 -217864107 - L2 LINE L2 -421 2893 1139 3422 51 14 2 chr2 35392579 35393012 -217863571 + L1PA7 LINE L1 5713 6150 -4 824 268 27 58 chr2 35393164 35393337 -217863246 - AluJo SINE Alu -15 287 125 2300 109 0 0 chr2 35393337 35393639 -217862944 - AluSg1 SINE Alu -7 302 1 824 268 27 58 chr2 35393639 35393760 -217862823 - AluJo SINE Alu -177 125 2 357 259 88 41 chr2 35394139 35394309 -217862274 - MIR SINE MIR -1 261 84 26 0 0 0 chr2 35394916 35394942 -217861641 + AT_rich Low_complexity Low_complexity 1 26 0 2219 98 14 7 chr2 35395289 35395586 -217860997 + AluSg SINE Alu 1 299 -11 2285 106 7 0 chr2 35396333 35396636 -217859947 + AluSx SINE Alu 1 305 -7 376 330 35 35 chr2 35397729 35397956 -217858627 + MLT1J LTR MaLR 235 461 -50 1508 173 67 4 chr2 35398994 35399367 -217857216 + L1MC2 LINE L1 5734 6170 -174 2405 93 3 0 chr2 35399368 35399701 -217856882 + AluSq SINE Alu 1 334 0 1351 330 160 23 chr2 35400944 35401378 -217855205 + L2 LINE L2 1444 1817 -1496 1902 150 17 0 chr2 35401378 35401671 -217854912 - AluSx SINE Alu -14 298 1 1351 330 160 23 chr2 35401671 35402861 -217853722 + L2 LINE L2 1817 3313 0 1857 147 13 10 chr2 35403201 35403507 -217853076 - AluSx SINE Alu -5 307 1 2368 91 0 0 chr2 35403585 35403882 -217852701 - AluSq SINE Alu -16 297 1 23 33 0 0 chr2 35403958 35403988 -217852595 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 35404564 35404585 -217851998 + AT_rich Low_complexity Low_complexity 1 21 0 633 258 41 21 chr2 35404851 35405045 -217851538 - MIR SINE MIR -7 255 58 22 0 0 0 chr2 35405284 35405306 -217851277 + AT_rich Low_complexity Low_complexity 1 22 0 3461 174 30 10 chr2 35405388 35406087 -217850496 + L1MA4A LINE L1 4081 4793 -1353 3294 141 12 18 chr2 35406076 35406785 -217849798 + L1MA4A LINE L1 5127 5832 -471 * 1654 25 0 5 chr2 35407452 35407672 -217848911 + L1PA3 LINE L1 5952 6170 0 37 62 0 0 chr2 35407679 35407744 -217848839 + AT_rich Low_complexity Low_complexity 1 65 0 330 289 67 30 chr2 35408205 35408340 -217848243 - MIR3 SINE MIR -7 201 62 351 0 0 0 chr2 35408969 35409008 -217847575 + (CA)n Simple_repeat Simple_repeat 2 40 0 833 142 27 0 chr2 35409061 35409209 -217847374 - AluJb SINE Alu -1 311 160 2045 132 7 0 chr2 35409679 35409974 -217846609 - AluSg SINE Alu -13 297 1 3516 86 68 0 chr2 35410309 35410821 -217845762 + L1PA13 LINE L1 5617 6163 0 228 305 57 19 chr2 35410868 35410973 -217845610 - MIR SINE MIR -46 216 108 320 304 48 60 chr2 35411791 35411959 -217844624 - MIR SINE MIR -50 212 47 16089 81 4 15 chr2 35411963 35414263 -217842320 + L1PA6 LINE L1 918 3191 -2955 5155 54 0 0 chr2 35414263 35414891 -217841692 + L1PA5 LINE L1 5526 6154 0 * 17155 56 5 1 chr2 35414888 35417857 -217838726 + L1PA6 LINE L1 3179 6143 -11 6344 188 8 9 chr2 35419882 35421976 -217834607 + L1PA15 LINE L1 4078 6156 -9 297 302 104 39 chr2 35423223 35423405 -217833178 - MIR SINE MIR -10 252 59 252 328 145 15 chr2 35423741 35423872 -217832711 + MIR SINE MIR 5 152 -110 2321 71 3 10 chr2 35423876 35424201 -217832382 + AluY SINE Alu 2 311 0 2068 169 8 16 chr2 35425568 35425936 -217830647 - MLT1A1 LTR MaLR 0 365 1 523 290 115 40 chr2 35426264 35427125 -217829458 + L1ME3A LINE L1 1450 2375 -4021 240 214 145 63 chr2 35427293 35427452 -217829131 + L1ME3A LINE L1 5386 5557 -682 433 307 68 19 chr2 35427648 35427957 -217828626 + L1ME3A LINE L1 5747 6070 -169 1044 55 0 0 chr2 35427957 35428085 -217828498 - L1PA6 LINE L1 -433 5721 5594 3419 58 0 0 chr2 35428085 35428513 -217828070 + L1PA6 LINE L1 5725 6152 -2 307 306 16 49 chr2 35428513 35428696 -217827887 + L1ME3A LINE L1 6059 6235 -4 228 297 45 72 chr2 35429003 35429114 -217827469 - L2 LINE L2 -2 3270 3163 357 326 80 29 chr2 35429943 35430182 -217826401 + MIR SINE MIR 3 253 -9 523 288 59 12 chr2 35431183 35431353 -217825230 + LTR33 LTR ERVL 4 181 -340 331 369 20 10 chr2 35431414 35431609 -217824974 + LTR33 LTR ERVL 304 500 -21 889 296 109 3 chr2 35432031 35432315 -217824268 + LTR16A LTR ERVL 135 448 -2 1875 229 127 22 chr2 35432425 35432962 -217823621 - MLT1E LTR MaLR 0 593 1 363 363 47 10 chr2 35434118 35434311 -217822272 - MIR SINE MIR -55 207 8 1971 102 4 4 chr2 35435229 35435493 -217821090 - AluSx SINE Alu -21 291 28 370 115 103 0 chr2 35435600 35435687 -217820896 - AluSq/x SINE Alu -197 106 11 22 0 0 0 chr2 35435817 35435839 -217820744 + AT_rich Low_complexity Low_complexity 1 22 0 184 315 0 90 chr2 35436018 35436107 -217820476 - L2 LINE L2 -3228 86 6 21 36 0 0 chr2 35437019 35437047 -217819536 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr2 35438325 35438351 -217818232 + (TA)n Simple_repeat Simple_repeat 2 27 0 1746 88 0 0 chr2 35438351 35438566 -217818017 - AluSg/x SINE Alu -12 298 84 2183 117 3 3 chr2 35439748 35440048 -217816535 + AluSg SINE Alu 1 300 -10 22 35 0 0 chr2 35440135 35440164 -217816419 + AT_rich Low_complexity Low_complexity 1 29 0 350 220 89 77 chr2 35440592 35440741 -217815842 - MIR3 SINE MIR -52 156 37 193 194 65 65 chr2 35440999 35441061 -217815522 + MIR3 SINE MIR 140 201 -7 184 378 14 0 chr2 35443406 35443480 -217813103 + L2 LINE L2 335 409 -2905 2332 90 7 0 chr2 35443693 35443992 -217812591 - AluSc SINE Alu -8 301 1 215 352 46 9 chr2 35444020 35444128 -217812455 + MIR SINE MIR 126 237 -25 435 332 60 30 chr2 35444205 35444437 -217812146 + MIR SINE MIR 12 250 -12 215 200 0 0 chr2 35444784 35444819 -217811764 + (TG)n Simple_repeat Simple_repeat 2 36 0 7456 190 40 11 chr2 35444819 35447751 -217808832 - L1 LINE L1 -1922 4926 1907 8339 108 12 4 chr2 35447752 35449779 -217806804 - L1PA8 LINE L1 -2 6485 4418 8523 185 31 25 chr2 35449779 35452840 -217803743 - L1PA8 LINE L1 -3312 3149 10 8159 201 27 50 chr2 35452863 35452965 -217803618 - L1 LINE L1 -4946 1903 1800 2290 126 8 21 chr2 35452965 35453345 -217803238 + THE1C LTR MaLR 1 375 0 8159 201 27 50 chr2 35453345 35455189 -217801394 - L1 LINE L1 -5049 1800 1 390 218 58 65 chr2 35455200 35455508 -217801075 - L1M4 LINE L1 -2812 3334 3029 225 0 0 0 chr2 35457000 35457025 -217799558 + (TC)n Simple_repeat Simple_repeat 2 26 0 234 220 0 17 chr2 35457088 35457147 -217799436 + (TA)n Simple_repeat Simple_repeat 1 58 0 387 0 0 0 chr2 35457147 35457190 -217799393 + (TG)n Simple_repeat Simple_repeat 2 44 0 571 61 74 12 chr2 35457205 35457368 -217799215 + (TA)n Simple_repeat Simple_repeat 2 174 0 181 0 69 0 chr2 35457925 35457954 -217798629 + (TA)n Simple_repeat Simple_repeat 2 32 0 516 36 95 30 chr2 35457968 35458136 -217798447 + (TA)n Simple_repeat Simple_repeat 1 179 0 284 51 68 0 chr2 35458173 35458232 -217798351 + (TA)n Simple_repeat Simple_repeat 1 63 0 25 0 0 0 chr2 35458302 35458327 -217798256 + AT_rich Low_complexity Low_complexity 1 25 0 2346 105 0 0 chr2 35459450 35459754 -217796829 + AluSx SINE Alu 1 304 -8 1693 205 58 3 chr2 35460279 35460625 -217795958 - MLT1A1 LTR MaLR 0 365 1 15946 44 4 2 chr2 35460959 35463722 -217792861 - L1PA4 LINE L1 -4 6151 3387 7374 36 1 1 chr2 35463718 35465385 -217791198 - L1PA3 LINE L1 0 6155 4491 * 24739 66 3 1 chr2 35465388 35468770 -217787813 - L1PA4 LINE L1 -2754 3392 2 283 366 18 0 chr2 35469273 35469385 -217787198 - L2 LINE L2 -8 3264 3151 339 252 65 65 chr2 35469430 35469585 -217786998 - MIR SINE MIR -48 214 60 4008 34 21 0 chr2 35472022 35472553 -217784030 - L1P LINE L1 -762 5384 4843 687 86 0 35 chr2 35472550 35472666 -217783917 + L1P LINE L1 4773 4884 -1262 * 386 210 0 0 chr2 35473126 35473207 -217783376 - MER96 DNA MER1_type? -90 85 5 578 282 88 35 chr2 35473593 35473877 -217782706 + L2 LINE L2 2999 3297 -16 793 182 35 104 chr2 35474038 35474269 -217782314 + MER20 DNA MER1_type 5 219 0 277 294 54 11 chr2 35474269 35474361 -217782222 - MER5A DNA MER1_type -74 115 20 222 62 0 0 chr2 35475609 35475641 -217780942 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1182 249 52 23 chr2 35475762 35476111 -217780472 - LTR16A LTR ERVL -5 445 87 466 200 222 0 chr2 35477119 35477254 -217779329 + MLT1D LTR MaLR 281 445 -60 5438 161 14 2 chr2 35477516 35478405 -217778178 - MER54A LTR ERVL 0 901 3 2469 69 3 0 chr2 35478498 35478801 -217777782 + AluY SINE Alu 2 305 -6 218 329 141 12 chr2 35479179 35479264 -217777319 - MIR SINE MIR -97 111 16 402 206 20 10 chr2 35479290 35479392 -217777191 + MER94 DNA DNA 1 103 -31 23 0 0 0 chr2 35479844 35479867 -217776716 + AT_rich Low_complexity Low_complexity 1 23 0 24134 23 0 0 chr2 35479868 35482859 -217773724 - L1HS LINE L1 -968 5178 2188 7697 4 1 0 chr2 35482856 35483821 -217772762 + L1HS LINE L1 5190 6155 0 * 952 248 87 13 chr2 35484187 35484578 -217772005 + MER110A LTR ERV1 49 468 0 520 233 195 19 chr2 35484620 35484779 -217771804 - MIR SINE MIR -50 212 26 279 346 109 0 chr2 35485308 35485510 -217771073 + L3 LINE CR1 630 853 -724 274 360 35 9 chr2 35485520 35485634 -217770949 + L3 LINE CR1 1379 1495 -82 28 61 0 0 chr2 35486548 35486597 -217769986 + AT_rich Low_complexity Low_complexity 1 49 0 1404 233 32 12 chr2 35486671 35487071 -217769512 - L1ME1 LINE L1 -167 5999 5592 6004 111 20 47 chr2 35487097 35488333 -217768250 + L1MA3 LINE L1 5101 6305 0 824 243 94 4 chr2 35488389 35488656 -217767927 - L1ME1 LINE L1 -611 5555 5265 3042 269 26 24 chr2 35488713 35489993 -217766590 - L1ME1 LINE L1 -890 5256 3975 5757 142 10 14 chr2 35490012 35490688 -217765895 + L1PB3 LINE L1 4910 5580 -574 2096 127 7 0 chr2 35490688 35490995 -217765588 - AluSg SINE Alu -1 309 1 5757 142 10 14 chr2 35490995 35491552 -217765031 + L1PB3 LINE L1 5580 6138 -16 278 170 0 0 chr2 35491578 35491625 -217764958 - L1ME1 LINE L1 -2157 3989 3943 394 298 107 29 chr2 35492948 35493190 -217763393 + MIR SINE MIR 1 261 -1 2257 76 7 26 chr2 35493567 35493870 -217762713 + AluSx SINE Alu 5 301 -11 274 358 193 21 chr2 35493938 35494648 -217761935 + L2 LINE L2 860 1446 -1868 2259 89 0 13 chr2 35494648 35494951 -217761632 + AluY SINE Alu 1 299 -12 274 358 193 21 chr2 35494951 35495331 -217761252 + L2 LINE L2 1446 2138 -1176 447 281 127 70 chr2 35495331 35495893 -217760690 + L2 LINE L2 2710 3305 -8 232 269 138 35 chr2 35495975 35496120 -217760463 - MIR SINE MIR -46 216 57 4213 226 62 46 chr2 35496144 35497135 -217759448 - L1MB7 LINE L1 -15 6169 5195 1534 186 6 40 chr2 35497135 35497458 -217759125 - AluJo SINE Alu 0 312 1 4213 226 62 46 chr2 35497458 35498256 -217758327 - L1MB7 LINE L1 -989 5195 4344 1690 188 14 0 chr2 35498256 35498544 -217758039 - AluJo SINE Alu -20 292 1 4213 226 62 46 chr2 35498544 35499065 -217757518 - L1MB7 LINE L1 -1840 4344 3833 209 382 0 0 chr2 35500242 35500310 -217756273 - L2 LINE L2 -3 3269 3202 2021 138 0 10 chr2 35500407 35500705 -217755878 + AluSx SINE Alu 1 295 -17 355 257 76 0 chr2 35500836 35500941 -217755642 + MIR3 SINE MIR 85 197 -11 3387 15 10 2 chr2 35501634 35502034 -217754549 - L1PA2 LINE L1 -487 5668 5266 4339 16 0 0 chr2 35502034 35502523 -217754060 + L1PA2 LINE L1 5657 6154 -1 23 0 0 0 chr2 35504828 35504851 -217751732 + AT_rich Low_complexity Low_complexity 1 23 0 300 346 19 26 chr2 35504998 35505154 -217751429 - MIR SINE MIR -36 226 72 366 231 43 9 chr2 35505163 35505275 -217751308 - MLT1I LTR MaLR 0 416 311 631 273 52 30 chr2 35505804 35506071 -217750512 - L1ME LINE L1 -327 5794 5522 1928 142 7 0 chr2 35506132 35506413 -217750170 - AluSx SINE Alu -25 287 5 2208 66 35 3 chr2 35508380 35508669 -217747914 + AluY SINE Alu 1 298 -13 418 306 111 78 chr2 35508858 35509319 -217747264 - L2 LINE L2 0 3313 2838 2157 106 3 0 chr2 35510037 35510330 -217746253 + AluSx SINE Alu 1 294 -18 1040 126 88 0 chr2 35510416 35510575 -217746008 + AluSx SINE Alu 1 173 -139 401 244 0 0 chr2 35511241 35511331 -217745252 + MER66B LTR ERV1 2 91 -395 241 345 94 60 chr2 35511457 35511500 -217745083 - L2 LINE L2 -1002 2312 2272 2269 178 54 13 chr2 35511500 35511966 -217744617 + MER66B LTR ERV1 2 486 0 241 345 94 60 chr2 35511966 35512359 -217744224 - L2 LINE L2 -1042 2272 1861 417 281 0 23 chr2 35512818 35512946 -217743637 - MER117 DNA MER1_type -40 157 33 204 314 119 62 chr2 35513032 35513258 -217743325 - L2 LINE L2 -2099 1215 977 846 209 63 19 chr2 35513351 35513392 -217743191 + MER34 LTR ERV1 325 363 -179 2269 99 7 0 chr2 35513392 35513696 -217742887 + AluSc SINE Alu 1 306 -3 846 209 63 19 chr2 35513696 35513860 -217742723 + MER34 LTR ERV1 363 539 -3 599 221 14 29 chr2 35514083 35514223 -217742360 - AluJo SINE Alu -173 139 2 2820 111 9 11 chr2 35514593 35515026 -217741557 - L1MA2 LINE L1 -26 6278 5847 6840 189 10 18 chr2 35515027 35516428 -217740155 - L1 LINE L1 -1730 5835 4444 2008 129 93 12 chr2 35516428 35516760 -217739823 - THE1B LTR MaLR -1 363 5 6840 189 10 18 chr2 35516760 35516832 -217739751 - L1 LINE L1 -3121 4444 4373 * 8523 147 29 31 chr2 35516827 35517655 -217738928 - L1 LINE L1 -4256 3309 2485 2334 80 6 6 chr2 35517655 35517966 -217738617 - AluY SINE Alu 0 311 1 8523 147 29 31 chr2 35517966 35518742 -217737841 - L1 LINE L1 -5080 2485 1709 549 254 107 36 chr2 35518905 35519157 -217737426 - MER76 LTR ERV -137 551 282 1008 237 11 18 chr2 35519157 35519435 -217737148 + L1M4 LINE L1 3418 3693 -2453 848 324 69 53 chr2 35519440 35520038 -217736545 - L2 LINE L2 -537 2777 2171 606 252 202 32 chr2 35520300 35520677 -217735906 + L1ME4a LINE L1 5629 6069 -52 3657 103 12 2 chr2 35521859 35522374 -217734209 + L1PA13 LINE L1 5623 6142 -21 183 74 0 0 chr2 35522516 35522523 -217734060 + (TAA)n Simple_repeat Simple_repeat 2 8 -20 2346 73 0 0 chr2 35522523 35522809 -217733774 + AluY SINE Alu 1 286 -25 183 74 0 0 chr2 35522809 35522828 -217733755 + (TAA)n Simple_repeat Simple_repeat 7 28 0 307 340 20 15 chr2 35522906 35523103 -217733480 + HAL1b LINE L1 256 453 -895 449 108 96 0 chr2 35523141 35523224 -217733359 + L1PA12 LINE L1 6078 6168 0 356 292 29 22 chr2 35523371 35523508 -217733075 + L1MC4 LINE L1 7356 7493 -549 207 0 0 0 chr2 35523978 35524001 -217732582 + (TA)n Simple_repeat Simple_repeat 1 23 0 414 319 176 9 chr2 35527145 35527361 -217729222 - MIR SINE MIR 0 262 11 189 352 0 0 chr2 35527999 35528053 -217728530 - MIR SINE MIR -2 260 207 1645 263 49 30 chr2 35528169 35528678 -217727905 + LTR40a LTR ERVL 1 519 0 1388 193 57 33 chr2 35528919 35529264 -217727319 + MLT1A1 LTR MaLR 1 352 -13 462 337 49 0 chr2 35530551 35530714 -217725869 - MER117 DNA MER1_type -2 195 25 235 374 45 32 chr2 35530907 35531062 -217725521 - MIR3 SINE MIR -4 204 48 469 255 57 13 chr2 35531225 35531382 -217725201 + MIR SINE MIR 98 261 -1 2090 124 3 0 chr2 35531424 35531715 -217724868 + AluSx SINE Alu 1 292 -20 456 330 87 54 chr2 35531989 35532322 -217724261 + L1M4 LINE L1 3798 4141 -2005 308 311 107 0 chr2 35532442 35532564 -217724019 + L1M4 LINE L1 4129 4263 -1883 1437 215 18 0 chr2 35532905 35533235 -217723348 + L1MB7 LINE L1 5836 6171 -13 23 0 0 0 chr2 35533327 35533350 -217723233 + AT_rich Low_complexity Low_complexity 1 23 0 282 319 80 0 chr2 35534204 35534317 -217722266 + MLT1G1 LTR MaLR 1 122 -473 386 321 14 29 chr2 35534443 35534583 -217722000 + MLT1G1 LTR MaLR 182 319 -276 502 248 29 15 chr2 35534587 35534724 -217721859 + MLT1G1 LTR MaLR 450 588 -7 2110 124 0 0 chr2 35534806 35535097 -217721486 - AluY SINE Alu -20 291 1 241 220 20 0 chr2 35535219 35535269 -217721314 + L1MA8 LINE L1 460 510 -6979 274 161 18 0 chr2 35535313 35535369 -217721214 + L1MA8 LINE L1 2579 2635 -4930 7544 171 34 20 chr2 35535382 35538045 -217718538 + L1MA8 LINE L1 4940 7688 -22 327 268 62 21 chr2 35538872 35538969 -217717614 - MIR SINE MIR -156 106 6 415 191 0 19 chr2 35541296 35541401 -217715182 + (TG)n Simple_repeat Simple_repeat 2 104 0 495 228 45 119 chr2 35541736 35542004 -217714579 + MER112 DNA MER1_type 1 248 -12 43328 45 2 4 chr2 35542610 35548771 -217707812 + L1PA4 LINE L1 1 6152 -3 27 62 0 0 chr2 35548771 35548819 -217707764 + AT_rich Low_complexity Low_complexity 1 48 0 952 90 0 0 chr2 35548928 35549050 -217707533 + AluSc SINE Alu 156 277 -32 207 0 0 0 chr2 35549050 35549073 -217707510 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 207 0 0 0 chr2 35549072 35549095 -217707488 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2414 68 7 7 chr2 35552159 35552466 -217704117 - AluY SINE Alu 0 311 5 5454 164 11 1 chr2 35552882 35553772 -217702811 - MER54A LTR ERVL 0 901 3 2204 100 0 7 chr2 35553865 35554156 -217702427 + AluSc SINE Alu 2 290 -19 667 152 0 0 chr2 35554193 35554298 -217702285 - MLT1A1 LTR MaLR -1 364 260 * 1707 199 44 0 chr2 35554292 35554613 -217701970 - MLT1A1 LTR MaLR -30 335 1 328 216 20 0 chr2 35554828 35554930 -217701653 + (TA)n Simple_repeat Simple_repeat 1 104 0 1437 191 43 28 chr2 35554930 35555212 -217701371 - AluJo SINE Alu -26 286 1 192 319 83 14 chr2 35555212 35555356 -217701227 - MIR SINE MIR -60 202 49 201 135 54 0 chr2 35555660 35555697 -217700886 + A-rich Low_complexity Low_complexity 3 41 0 374 69 17 0 chr2 35555698 35555756 -217700827 + (CA)n Simple_repeat Simple_repeat 2 60 0 223 254 51 0 chr2 35556872 35556931 -217699652 - MIR SINE MIR -83 179 118 326 283 75 53 chr2 35557031 35557218 -217699365 - HAL1 LINE L1 -13 2494 2304 251 246 16 0 chr2 35557671 35557732 -217698851 + L1MC/D LINE L1 5690 5751 -2057 22 56 0 0 chr2 35558468 35558504 -217698079 + AT_rich Low_complexity Low_complexity 1 36 0 1751 147 0 14 chr2 35559685 35559964 -217696619 - AluSg SINE Alu -3 307 33 336 253 0 0 chr2 35560123 35560206 -217696377 + L1M4 LINE L1 4791 4873 -1273 2090 111 7 3 chr2 35561557 35561846 -217694737 + AluSg SINE Alu 1 290 -20 472 33 0 0 chr2 35561865 35561926 -217694657 - L1P LINE L1 -3042 3104 3044 15475 51 24 0 chr2 35561926 35564636 -217691947 + L1PA5 LINE L1 3419 6154 0 192 333 61 26 chr2 35565854 35565968 -217690615 + MIR3 SINE MIR 85 202 -6 413 49 0 16 chr2 35566111 35566172 -217690411 + (TA)n Simple_repeat Simple_repeat 2 61 0 225 250 73 29 chr2 35566970 35567038 -217689545 + L2 LINE L2 3200 3270 -2 196 161 0 0 chr2 35567125 35567156 -217689427 - MIR SINE MIR -60 148 118 357 279 55 50 chr2 35567459 35567678 -217688905 - L1ME4a LINE L1 -135 5986 5767 310 148 0 0 chr2 35567966 35568020 -217688563 - L1ME4a LINE L1 -657 5517 5464 1684 135 77 40 chr2 35568464 35568789 -217687794 - MER1B DNA MER1_type 0 337 1 27 29 0 0 chr2 35569065 35569099 -217687484 + AT_rich Low_complexity Low_complexity 1 34 0 223 366 122 23 chr2 35571005 35571226 -217685357 + MIR SINE MIR 20 262 0 1127 224 82 23 chr2 35571356 35571660 -217684923 + MLT1B LTR MaLR 3 324 -66 429 302 47 51 chr2 35572165 35572380 -217684203 + MIR SINE MIR 28 241 -21 480 296 172 0 chr2 35573147 35573316 -217683267 - MIR SINE MIR -57 205 8 211 224 0 20 chr2 35573772 35573821 -217682762 + (CATA)n Simple_repeat Simple_repeat 2 49 0 423 222 16 95 chr2 35574252 35574378 -217682205 + MIR SINE MIR 90 205 -57 200 271 42 0 chr2 35574381 35574477 -217682106 + (TA)n Simple_repeat Simple_repeat 2 101 0 21 0 0 0 chr2 35574718 35574739 -217681844 + AT_rich Low_complexity Low_complexity 1 21 0 1556 216 29 20 chr2 35574939 35575290 -217681293 + MLT1A1 LTR MaLR 12 365 0 432 333 29 34 chr2 35576181 35576385 -217680198 + MIR SINE MIR 41 243 -19 258 296 14 99 chr2 35576980 35577122 -217679461 + Charlie8 DNA MER1_type 4 133 -2284 944 204 8 122 chr2 35577167 35577519 -217679064 + L1MD2 LINE L1 6035 6346 -13 292 238 119 12 chr2 35577532 35577616 -217678967 + Charlie8 DNA MER1_type 145 237 -2180 232 289 12 12 chr2 35577616 35577699 -217678884 + GA-rich Low_complexity Low_complexity 2 84 0 387 239 14 14 chr2 35577721 35577863 -217678720 + (TA)n Simple_repeat Simple_repeat 2 143 0 300 250 56 19 chr2 35578015 35578175 -217678408 + L1M4 LINE L1 3598 3763 -3802 8088 210 25 34 chr2 35578288 35579767 -217676816 + L1MA3 LINE L1 16 1837 -5728 2657 90 20 0 chr2 35579767 35580124 -217676459 - THE1B LTR MaLR 0 364 1 8088 210 25 34 chr2 35580124 35581128 -217675455 + L1MA3 LINE L1 1837 2849 -4716 * 10639 166 44 64 chr2 35581122 35581918 -217674665 + L1MA3 LINE L1 4021 4832 -2892 1374 156 148 11 chr2 35581918 35582181 -217674402 + AluSx SINE Alu 2 300 -2 1134 138 0 33 chr2 35582183 35582364 -217674219 + AluSg/x SINE Alu 121 295 -17 10639 166 44 64 chr2 35582364 35583989 -217672594 + L1MA3 LINE L1 4833 6520 -1204 2319 90 16 16 chr2 35583989 35584300 -217672283 - AluSq SINE Alu -2 311 1 10639 166 44 64 chr2 35584300 35585481 -217671102 + L1MA3 LINE L1 6520 7724 0 231 319 33 9 chr2 35585499 35585709 -217670874 + L1M4 LINE L1 3894 4108 -3457 3727 57 43 0 chr2 35585725 35586195 -217670388 + LTR2B LTR ERV1 1 490 0 2712 98 5 0 chr2 35586195 35586573 -217670010 + Harlequin LTR ERV1 1 380 -6516 733 83 0 0 chr2 35586568 35586664 -217669919 + Harlequin LTR ERV1 262 357 -6539 * 427 343 57 23 chr2 35586836 35587136 -217669447 + L1M4 LINE L1 5918 6227 -1338 433 230 80 16 chr2 35587330 35587517 -217669066 + L1ME3 LINE L1 5713 5911 -251 1179 139 20 68 chr2 35587962 35588158 -217668425 - L1MA1 LINE L1 -61 6241 6058 2366 86 0 16 chr2 35588158 35588473 -217668110 - AluY SINE Alu -1 310 1 1179 139 20 68 chr2 35588473 35588527 -217668056 - L1MA1 LINE L1 -244 6058 6003 21 36 0 0 chr2 35588622 35588650 -217667933 + AT_rich Low_complexity Low_complexity 1 28 0 504 348 118 10 chr2 35589311 35589607 -217666976 - L3 LINE CR1 -11 1566 1239 2105 99 7 7 chr2 35590579 35590862 -217665721 + AluSq SINE Alu 1 283 -30 913 9 0 0 chr2 35590863 35590969 -217665614 + L1PA2 LINE L1 6050 6155 0 255 93 0 0 chr2 35591004 35591047 -217665536 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 400 290 71 47 chr2 35591361 35591785 -217664798 + HAL1 LINE L1 1070 1503 -1004 1163 173 53 4 chr2 35593371 35593596 -217662987 - MER46A DNA MER2_type 0 236 1 2454 184 64 2 chr2 35594452 35594937 -217661646 - MLT2B2 LTR ERVL 0 515 1 2424 74 3 6 chr2 35595557 35595869 -217660714 + AluY SINE Alu 1 311 0 392 197 0 0 chr2 35596114 35596185 -217660398 - MER58 DNA MER1_type -16 2404 129 207 0 0 0 chr2 35596189 35596212 -217660371 + (A)n Simple_repeat Simple_repeat 1 23 0 618 227 108 82 chr2 35596273 35596722 -217659861 + MER110A LTR ERV1 26 466 -2 22 0 0 0 chr2 35596875 35596897 -217659686 + AT_rich Low_complexity Low_complexity 1 22 0 231 36 0 0 chr2 35598039 35598067 -217658516 + (CA)n Simple_repeat Simple_repeat 1 28 0 653 238 63 78 chr2 35598877 35599295 -217657288 + L1ME1 LINE L1 5730 6122 -44 180 0 0 0 chr2 35599245 35599265 -217657318 + (TA)n Simple_repeat Simple_repeat 1 20 0 271 233 63 75 chr2 35599265 35599343 -217657240 + L1MA10 LINE L1 6248 6325 -9 2420 169 17 0 chr2 35599376 35599795 -217656788 - MSTC LTR MaLR -2 426 1 26 50 0 0 chr2 35600052 35600092 -217656491 + AT_rich Low_complexity Low_complexity 1 40 0 216 274 0 0 chr2 35600107 35600158 -217656425 + GA-rich Low_complexity Low_complexity 2 52 0 2092 178 18 5 chr2 35600187 35600581 -217656002 - L1PA16 LINE L1 -9 6157 5759 2875 112 12 30 chr2 35600584 35600776 -217655807 + L1P4 LINE L1 5275 5469 -697 2244 101 0 16 chr2 35600776 35601092 -217655491 - AluSx SINE Alu -1 311 1 2875 112 12 30 chr2 35601092 35601392 -217655191 + L1P4 LINE L1 5469 5758 -408 665 126 11 153 chr2 35601400 35601590 -217654993 - AluY SINE Alu -13 298 136 374 205 13 109 chr2 35602288 35602444 -217654139 - L1MA9 LINE L1 -8 6290 6143 2009 90 6 6 chr2 35603169 35603498 -217653085 + LTR7 LTR ERV1 25 442 -8 11101 120 16 23 chr2 35603534 35605488 -217651095 + HERVH LTR ERV1 460 2618 -5095 7321 96 21 6 chr2 35605488 35606630 -217649953 - HERVH LTR ERV1 -4 7709 6551 4073 90 2 0 chr2 35606619 35607230 -217649353 - HERVH LTR ERV1 -1333 6380 5769 * 1251 100 0 0 chr2 35607226 35607406 -217649177 - HERVH LTR ERV1 -3046 4667 4488 * 3125 119 0 6 chr2 35607408 35607913 -217648670 - HERVH LTR ERV1 -3720 3993 3492 810 131 41 0 chr2 35607903 35608048 -217648535 - HERVH LTR ERV1 -4423 3290 3140 * 6426 113 12 12 chr2 35608042 35609088 -217647495 - HERVH LTR ERV1 -4726 2987 1942 2976 131 2 2 chr2 35609090 35609564 -217647019 - HERVH LTR ERV1 -7239 474 1 2566 107 92 7 chr2 35609566 35609979 -217646604 - LTR7 LTR ERV1 -2 448 1 2307 110 0 18 chr2 35609979 35610360 -217646223 + HERVH LTR ERV1 2614 2987 -4726 859 135 7 0 chr2 35610354 35610502 -217646081 + HERVH LTR ERV1 3140 3288 -4425 * 3226 111 0 6 chr2 35610494 35610999 -217645584 + HERVH LTR ERV1 3492 3993 -3720 1330 72 0 0 chr2 35611001 35611182 -217645401 + HERVH LTR ERV1 4488 4668 -3045 1714 73 11 4 chr2 35611183 35611443 -217645140 + LTR7 LTR ERV1 187 448 -2 2332 48 0 61 chr2 35613195 35613505 -217643078 - AluY SINE Alu -20 291 1 23 54 0 0 chr2 35613608 35613645 -217642938 + AT_rich Low_complexity Low_complexity 1 37 0 376 174 22 11 chr2 35614133 35614225 -217642358 + CT-rich Low_complexity Low_complexity 4 96 0 764 230 31 0 chr2 35614689 35614850 -217641733 + MER45A DNA AcHobo 1 166 -12 1594 202 3 18 chr2 35615672 35616004 -217640579 + MLT1A1 LTR MaLR 34 360 -5 303 263 13 0 chr2 35616251 35616327 -217640256 - L3 LINE CR1 -163 1414 1338 2349 119 13 24 chr2 35616735 35617113 -217639470 + THE1C LTR MaLR 2 375 0 199 325 61 26 chr2 35617130 35617244 -217639339 - L3 LINE CR1 -453 1124 1007 240 314 47 0 chr2 35617414 35617500 -217639083 - L3 LINE CR1 -823 754 665 201 263 0 0 chr2 35618213 35618270 -217638313 + (TA)n Simple_repeat Simple_repeat 2 58 0 1937 147 40 28 chr2 35618270 35618624 -217637959 + THE1B LTR MaLR 2 359 -5 335 181 14 0 chr2 35618628 35618700 -217637883 + (TA)n Simple_repeat Simple_repeat 1 73 0 225 234 0 0 chr2 35618939 35618986 -217637597 - MER69 DNA AcHobo -3 2523 2477 437 327 77 13 chr2 35619457 35619757 -217636826 + L1MEd LINE L1 857 1175 -4944 248 281 63 54 chr2 35619776 35619997 -217636586 - L1M4 LINE L1 -2049 4097 3875 354 321 78 64 chr2 35620037 35620445 -217636138 - L1M4 LINE L1 -2368 3778 3365 186 227 0 0 chr2 35620524 35620568 -217636015 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 215 324 67 109 chr2 35620851 35621089 -217635494 + L2 LINE L2 3031 3258 -14 2481 70 0 6 chr2 35621189 35621502 -217635081 + AluY SINE Alu 1 311 0 1385 230 45 41 chr2 35622902 35623345 -217633238 + MER31B LTR ERV1 1 445 -21 5091 107 10 5 chr2 35623376 35624168 -217632415 - L1PB1 LINE L1 0 6151 5356 * 9755 198 32 13 chr2 35624157 35628115 -217628468 - L1PBa LINE L1 -1588 5274 1093 2654 239 86 16 chr2 35628118 35629091 -217627492 - L1PBa LINE L1 -5817 1046 6 387 0 0 0 chr2 35629098 35629141 -217627442 + (TA)n Simple_repeat Simple_repeat 1 43 0 1302 202 174 3 chr2 35629563 35629914 -217626669 - LTR45B LTR ERV1 -76 413 3 1724 184 54 20 chr2 35630028 35630435 -217626148 - L1MA8 LINE L1 -2 6289 5869 1698 128 3 96 chr2 35631092 35631479 -217625104 + AluJo SINE Alu 1 355 0 874 249 10 5 chr2 35632130 35632339 -217624244 - MER58A DNA MER1_type -5 219 10 1905 128 64 19 chr2 35633305 35633664 -217622919 + THE1C LTR MaLR 1 375 0 2243 68 10 24 chr2 35634197 35634491 -217622092 - AluY SINE Alu -21 290 1 557 283 43 17 chr2 35636124 35636657 -217619926 + L1M4c LINE L1 2025 2576 -3806 361 285 42 12 chr2 35636691 35636856 -217619727 + L1M4c LINE L1 3171 3340 -3042 601 200 0 73 chr2 35636914 35637064 -217619519 - Ricksha DNA DNA -2350 896 758 1460 303 98 22 chr2 35637494 35638306 -217618277 + L2 LINE L2 2424 3300 -13 260 318 9 19 chr2 35638337 35638444 -217618139 - MIR SINE MIR -56 206 101 2268 64 10 7 chr2 35639421 35639717 -217616866 + AluY SINE Alu 1 297 -14 229 329 0 0 chr2 35639750 35639826 -217616757 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 396 270 163 20 chr2 35640032 35640228 -217616355 - MLT1J2 LTR MaLR -212 238 15 5369 73 46 27 chr2 35641028 35641794 -217614789 - LTR17 LTR ERV1 0 780 1 321 89 0 0 chr2 35641891 35641936 -217614647 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 959 158 84 65 chr2 35642487 35642702 -217613881 - MER20 DNA MER1_type 0 219 1 387 227 117 13 chr2 35644715 35644869 -217611714 - L1ME3A LINE L1 -27 6143 5974 1242 167 193 36 chr2 35645378 35645767 -217610816 + LTR7 LTR ERV1 1 450 0 1756 209 113 20 chr2 35646419 35646863 -217609720 + MER67D LTR ERV1 29 513 -1 320 192 33 60 chr2 35647037 35647168 -217609415 - LTR41 LTR ERVL -1 794 660 770 222 0 66 chr2 35647407 35647605 -217608978 - LTR41 LTR ERVL -581 192 8 347 358 81 32 chr2 35647607 35647966 -217608617 - ERVL LTR ERVL -1461 4303 3910 2150 108 7 7 chr2 35647966 35648262 -217608321 - AluSc SINE Alu -13 296 1 347 358 81 32 chr2 35648262 35648408 -217608175 - ERVL LTR ERVL -1854 3910 3773 272 366 18 0 chr2 35648502 35648614 -217607969 - ERVL LTR ERVL -2040 3614 3501 325 311 42 34 chr2 35648874 35648993 -217607590 + L2 LINE L2 3194 3313 0 227 215 15 0 chr2 35649134 35649199 -217607384 + GA-rich Low_complexity Low_complexity 3 68 0 401 117 55 0 chr2 35650489 35650617 -217605966 + (TA)n Simple_repeat Simple_repeat 2 136 0 303 277 35 21 chr2 35650965 35651106 -217605477 + (TATG)n Simple_repeat Simple_repeat 2 144 0 22 56 0 0 chr2 35651622 35651658 -217604925 + AT_rich Low_complexity Low_complexity 1 36 0 470 244 64 39 chr2 35652056 35652212 -217604371 + MIR SINE MIR 91 250 -12 247 227 163 35 chr2 35653280 35653421 -217603162 + MIR SINE MIR 104 262 0 22 0 0 0 chr2 35654387 35654409 -217602174 + AT_rich Low_complexity Low_complexity 1 22 0 5111 150 50 4 chr2 35655972 35657128 -217599455 + L1PA15 LINE L1 4963 6165 0 1399 201 61 0 chr2 35657332 35657494 -217599089 - AluJo SINE Alu -16 296 108 186 43 0 0 chr2 35657494 35657517 -217599066 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1399 201 61 0 chr2 35657517 35657633 -217598950 - AluJo SINE Alu -204 108 1 479 171 45 0 chr2 35657815 35657903 -217598680 - AluJ/FLAM SINE Alu -212 100 9 7601 27 1 0 chr2 35657903 35659200 -217597383 + L1PA4 LINE L1 4855 6152 -3 247 313 17 9 chr2 35659201 35659316 -217597267 + L1 LINE L1 3576 3691 -2455 2204 127 0 0 chr2 35659431 35659739 -217596844 - AluSp SINE Alu -5 308 1 284 303 173 14 chr2 35659922 35660130 -217596453 + L1 LINE L1 3951 4191 -1955 914 231 42 73 chr2 35660424 35660710 -217595873 + LTR40a LTR ERVL 228 504 -15 2334 50 13 35 chr2 35661790 35662108 -217594475 + AluY SINE Alu 1 311 0 1719 268 29 34 chr2 35663322 35663934 -217592649 + MER90 LTR ERV1 2 610 -4 399 41 0 0 chr2 35663972 35664021 -217592562 + (CA)n Simple_repeat Simple_repeat 2 50 0 5678 226 41 34 chr2 35664347 35666124 -217590459 + L1ME3A LINE L1 3569 5358 -816 829 262 74 4 chr2 35666187 35666458 -217590125 + L1ME3A LINE L1 5872 6161 -9 22 25 0 25 chr2 35717679 35717697 -217538886 + AT_rich Low_complexity Low_complexity 1 18 -21 772 282 10 10 chr2 35717697 35717998 -217538585 + AluY SINE Alu 1 301 0 22 25 0 25 chr2 35717998 35718019 -217538564 + AT_rich Low_complexity Low_complexity 18 39 0 335 377 15 0 chr2 35719547 35719677 -217536906 - L2 LINE L2 0 3272 3141 313 256 117 7 chr2 35720039 35720176 -217536407 + MER103 DNA DNA 2 153 -13 237 349 0 38 chr2 35720619 35720725 -217535858 + MIR3 SINE MIR 11 112 -96 195 219 0 0 chr2 35720720 35720761 -217535822 - L3 LINE CR1 -14 1563 1523 * 498 115 26 0 chr2 35720825 35720903 -217535680 + MADE1 DNA Mariner 1 80 0 2148 196 45 16 chr2 35721032 35721886 -217534697 - L1M1 LINE L1 -598 7121 6249 * 5423 199 30 52 chr2 35721878 35722492 -217534091 - L1M1 LINE L1 -1682 5883 5258 1782 130 10 81 chr2 35722492 35722800 -217533783 - AluSx SINE Alu -26 286 1 5423 199 30 52 chr2 35722800 35723003 -217533580 - L1M1 LINE L1 -2307 5258 5052 213 39 0 0 chr2 35723003 35723029 -217533554 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5423 199 30 52 chr2 35723029 35723725 -217532858 - L1M1 LINE L1 -2513 5052 4401 * 19037 172 39 14 chr2 35723720 35727439 -217529144 - L1M1 LINE L1 -3733 3832 17 6267 220 53 10 chr2 35727441 35729174 -217527409 - L1 LINE L1 -1433 4713 2906 43895 43 1 2 chr2 35729185 35735334 -217521249 + L1PA3 LINE L1 3 6144 -11 208 135 0 0 chr2 35735499 35735536 -217521047 + (T)n Simple_repeat Simple_repeat 1 37 0 2421 86 0 0 chr2 35735717 35736018 -217520565 + AluY SINE Alu 1 301 -10 2026 252 51 46 chr2 35736026 35736793 -217519790 - L1MD1 LINE L1 -20 6222 5452 330 319 70 13 chr2 35737014 35737171 -217519412 + MIR SINE MIR 53 218 -44 307 296 73 95 chr2 35738458 35738664 -217517919 - L1ME4a LINE L1 -148 5973 5764 2341 86 0 0 chr2 35738664 35738954 -217517629 - AluY SINE Alu -21 290 1 307 296 73 95 chr2 35738954 35739420 -217517163 - L1ME4a LINE L1 -357 5764 5316 188 319 127 66 chr2 35739570 35739783 -217516800 - L2 LINE L2 -833 2481 2256 254 306 0 59 chr2 35742172 35742291 -217514292 + MIR SINE MIR 45 156 -70 1519 91 5 0 chr2 35742681 35742889 -217513694 + L1PA11 LINE L1 5966 6174 0 1063 50 7 0 chr2 35743412 35743551 -217513032 + L1P LINE L1 2226 2365 -3781 29 70 0 0 chr2 35743910 35743967 -217512616 + AT_rich Low_complexity Low_complexity 1 57 0 21 0 0 0 chr2 35744033 35744054 -217512529 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr2 35745800 35745845 -217510738 + AT_rich Low_complexity Low_complexity 1 45 0 25 0 0 0 chr2 35746060 35746085 -217510498 + AT_rich Low_complexity Low_complexity 1 25 0 197 328 8 118 chr2 35746161 35746280 -217510303 - MIR SINE MIR -108 154 49 396 226 80 36 chr2 35746412 35746549 -217510034 + MER103 DNA DNA 14 156 -10 33 43 0 0 chr2 35746675 35746722 -217509861 + AT_rich Low_complexity Low_complexity 1 47 0 1918 179 28 3 chr2 35747040 35747392 -217509191 + MLT1A1 LTR MaLR 5 365 0 278 182 13 52 chr2 35747404 35747481 -217509102 + L1M2 LINE L1 5368 5441 -856 24 32 0 0 chr2 35747481 35747512 -217509071 + AT_rich Low_complexity Low_complexity 1 31 0 319 210 60 20 chr2 35747746 35747846 -217508737 + L1ME4a LINE L1 5769 5872 -249 3914 110 3 2 chr2 35748243 35748815 -217507768 - L1PB1 LINE L1 -3 6148 5576 835 124 0 0 chr2 35748815 35748944 -217507639 + L1P5 LINE L1 5338 5466 -685 342 0 0 0 chr2 35749407 35749445 -217507138 + (TG)n Simple_repeat Simple_repeat 2 39 0 206 355 65 39 chr2 35750218 35750373 -217506210 - MIR SINE MIR -23 239 81 7121 163 29 17 chr2 35751004 35753272 -217503311 - L1MA8 LINE L1 -4 6287 3997 328 299 93 41 chr2 35753611 35753955 -217502628 - L1ME4a LINE L1 -197 5924 5563 27 0 0 0 chr2 35754053 35754080 -217502503 + AT_rich Low_complexity Low_complexity 1 27 0 5031 57 28 0 chr2 35754303 35754956 -217501627 - L1PA7 LINE L1 0 6154 5484 294 215 41 8 chr2 35755096 35755217 -217501366 + (TATATG)n Simple_repeat Simple_repeat 2 126 0 1533 292 51 19 chr2 35755759 35756398 -217500185 - L2 LINE L2 -218 3095 2439 28 48 0 0 chr2 35756480 35756522 -217500061 + AT_rich Low_complexity Low_complexity 1 42 0 1061 260 47 51 chr2 35756983 35758461 -217498122 - L1MD2 LINE L1 -22 6731 5046 2234 94 0 0 chr2 35758461 35758796 -217497787 - AluY SINE Alu 0 336 2 1061 260 47 51 chr2 35758796 35759074 -217497509 - L1MD2 LINE L1 -1707 5046 4768 * 1151 238 52 13 chr2 35759067 35759450 -217497133 - L1MD2 LINE L1 -5167 1376 979 301 301 49 115 chr2 35759563 35759789 -217496794 - L1MD2 LINE L1 -5545 995 785 268 315 141 7 chr2 35761425 35761574 -217495009 - ERVL LTR ERVL -2275 3489 3321 264 352 29 29 chr2 35761771 35761995 -217494588 - ERVL LTR ERVL -2482 3172 2949 1126 221 38 4 chr2 35762157 35762424 -217494159 + L1MB8 LINE L1 5606 5881 -297 2143 134 27 24 chr2 35762730 35763104 -217493479 + THE1C LTR MaLR 1 375 0 367 326 124 5 chr2 35763211 35763429 -217493154 - LTR33A LTR ERVL -275 248 5 24 0 0 0 chr2 35763703 35763727 -217492856 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr2 35766643 35766676 -217489907 + AT_rich Low_complexity Low_complexity 1 33 0 704 270 160 21 chr2 35766933 35767457 -217489126 - L1ME1 LINE L1 -91 6075 5297 633 259 68 36 chr2 35767609 35767860 -217488723 - L1ME1 LINE L1 -1369 4777 4519 * 828 161 52 16 chr2 35767843 35768035 -217488548 - L1MDa LINE L1 -4389 2151 1953 1403 138 12 16 chr2 35768036 35768283 -217488300 - L1PA16 LINE L1 -1 6165 5920 325 285 96 0 chr2 35768306 35768478 -217488105 + L1ME LINE L1 5485 5562 -600 14706 213 31 42 chr2 35768500 35769754 -217486829 - L1PA16 LINE L1 -267 6602 5336 1332 77 25 20 chr2 35769754 35769950 -217486633 + L1PA14 LINE L1 5960 6156 -5 14706 213 31 42 chr2 35769950 35775410 -217481173 - L1PA16 LINE L1 -1533 5336 1 3042 253 72 25 chr2 35775432 35777056 -217479527 - L1MDa LINE L1 -4604 1936 18 216 0 0 0 chr2 35777107 35777131 -217479452 + (CA)n Simple_repeat Simple_repeat 2 25 0 2027 125 7 10 chr2 35777569 35777866 -217478717 - AluSx SINE Alu -16 296 1 235 91 0 0 chr2 35778215 35778248 -217478335 - Alu SINE Alu -205 97 65 1007 175 0 6 chr2 35778248 35778414 -217478169 + AluJb SINE Alu 127 291 -21 187 273 0 0 chr2 35779101 35779145 -217477438 - MIR SINE MIR -64 144 101 22 56 0 0 chr2 35779768 35779804 -217476779 + AT_rich Low_complexity Low_complexity 1 36 0 587 214 8 0 chr2 35780662 35780779 -217475804 + MSTB1 LTR MaLR 315 432 0 3824 219 34 7 chr2 35780803 35781749 -217474834 - L1 LINE L1 -1062 5084 4114 2411 123 6 6 chr2 35781792 35782157 -217474426 - L1PB1 LINE L1 -6 6145 5781 361 110 86 0 chr2 35782157 35782320 -217474263 + (TA)n Simple_repeat Simple_repeat 1 177 0 3463 153 15 5 chr2 35782320 35783099 -217473484 - L1PB1 LINE L1 -360 5791 5010 10972 210 32 54 chr2 35783102 35785951 -217470632 + L1 LINE L1 1664 4572 -1574 744 11 0 0 chr2 35785951 35786040 -217470543 + AluY SINE Alu 213 301 -10 10972 210 32 54 chr2 35786040 35786054 -217470529 + L1 LINE L1 4572 4585 -1561 1905 137 7 0 chr2 35786054 35786332 -217470251 + AluSx SINE Alu 1 280 -32 10972 210 32 54 chr2 35786332 35786781 -217469802 + L1 LINE L1 4585 5002 -1144 5764 237 62 3 chr2 35786786 35788483 -217468100 - L1 LINE L1 -2021 4125 2330 445 163 20 14 chr2 35788488 35788635 -217467948 + (TA)n Simple_repeat Simple_repeat 1 148 0 5715 240 25 34 chr2 35788647 35789896 -217466687 + L1M2 LINE L1 1192 2421 -4427 2257 101 0 0 chr2 35789896 35790192 -217466391 - AluY SINE Alu -15 296 1 5715 240 25 34 chr2 35790192 35790710 -217465873 + L1M2 LINE L1 2421 2942 -3906 231 103 0 0 chr2 35790741 35790780 -217465803 + (TC)n Simple_repeat Simple_repeat 1 39 0 408 20 0 0 chr2 35790782 35790831 -217465752 + (TG)n Simple_repeat Simple_repeat 2 50 0 688 279 40 7 chr2 35790834 35791110 -217465473 + L1M2 LINE L1 4491 4775 -2073 322 259 65 50 chr2 35791110 35791249 -217465334 + L1MD1 LINE L1 2943 3083 -3765 2045 259 101 40 chr2 35791249 35793256 -217463327 + L1MD1 LINE L1 4786 6935 -9 330 285 136 58 chr2 35793439 35793941 -217462642 - HAL1 LINE L1 -569 1938 1398 2644 196 26 16 chr2 35794213 35794790 -217461793 - L1MA7 LINE L1 -132 6159 5577 435 298 36 60 chr2 35794795 35795043 -217461540 - HAL1 LINE L1 -1456 1051 810 789 254 80 57 chr2 35795162 35795615 -217460968 - MLT1C LTR MaLR -4 463 1 287 229 0 60 chr2 35796965 35797048 -217459535 + L2 LINE L2 3227 3304 -9 26 30 0 0 chr2 35797622 35797655 -217458928 + AT_rich Low_complexity Low_complexity 1 33 0 304 264 0 11 chr2 35798295 35798382 -217458201 + L1ME3A LINE L1 45 130 -6266 1805 280 73 25 chr2 35798397 35799764 -217456819 + L1ME3A LINE L1 2118 3520 -2695 25 0 0 0 chr2 35799785 35799810 -217456773 + AT_rich Low_complexity Low_complexity 1 25 0 681 273 143 52 chr2 35800016 35800617 -217455966 + L1ME3A LINE L1 4386 5041 -1174 324 303 33 0 chr2 35800644 35800766 -217455817 + L1ME3A LINE L1 5419 5544 -689 1596 194 67 28 chr2 35800827 35801188 -217455395 - THE1C LTR MaLR 0 375 1 6489 140 232 19 chr2 35801188 35802487 -217454096 - THE1C-int LTR MaLR 0 1580 5 1692 175 52 30 chr2 35802493 35802858 -217453725 - THE1C LTR MaLR -2 373 1 237 304 13 0 chr2 35802858 35802937 -217453646 + L1ME3A LINE L1 5602 5681 -558 1472 286 109 21 chr2 35802942 35803509 -217453074 + MLT1E2 LTR MaLR 3 619 -7 335 316 93 60 chr2 35803568 35803954 -217452629 + L1ME3A LINE L1 5805 6203 -36 1349 233 0 7 chr2 35803987 35804266 -217452317 + AluJo SINE Alu 1 277 -35 38 39 0 0 chr2 35804285 35804337 -217452246 + AT_rich Low_complexity Low_complexity 1 52 0 356 266 133 26 chr2 35804416 35804649 -217451934 + MER5C DNA MER1_type 18 275 -49 21 71 0 0 chr2 35805121 35805163 -217451420 + AT_rich Low_complexity Low_complexity 1 42 0 394 282 27 75 chr2 35806012 35806200 -217450383 - MLT2E LTR ERVL -248 380 202 360 313 43 0 chr2 35806227 35806342 -217450241 - HERVL LTR ERVL -745 4909 4790 1973 139 29 42 chr2 35806460 35806840 -217449743 + THE1C LTR MaLR 1 375 0 6017 212 121 26 chr2 35806906 35808444 -217448139 + MER52A LTR ERV1 1 1755 0 704 215 22 53 chr2 35808467 35808695 -217447888 + L1MB8 LINE L1 5858 6078 -100 1818 185 34 50 chr2 35808702 35809085 -217447498 + MLT2B3 LTR ERVL 5 381 -173 539 112 0 35 chr2 35809086 35809202 -217447381 + (TTCC)n Simple_repeat Simple_repeat 3 114 0 237 86 0 0 chr2 35809202 35809237 -217447346 + MLT2B3 LTR ERVL 357 391 -6 348 211 21 0 chr2 35809249 35809344 -217447239 + L1MB7 LINE L1 6087 6183 -1 1214 201 147 14 chr2 35809574 35810036 -217446547 + Tigger7 DNA MER2_type 25 2587 0 248 318 64 0 chr2 35811877 35811987 -217444596 - MER58 DNA MER1_type -98 117 1 186 188 14 29 chr2 35812150 35812219 -217444364 + (TA)n Simple_repeat Simple_repeat 2 69 0 204 333 0 0 chr2 35812947 35812998 -217443585 + polypurine Low_complexity Low_complexity 4 54 0 419 359 137 0 chr2 35813457 35813800 -217442783 - L1M4 LINE L1 -2033 4113 3724 267 273 20 10 chr2 35813920 35814019 -217442564 - MLT1I LTR MaLR -3 406 307 912 269 145 30 chr2 35814770 35815637 -217440946 - L1M4 LINE L1 -1037 5109 4143 1398 294 66 36 chr2 35815772 35816758 -217439825 - L1MEc LINE L1 -4982 1414 400 1352 246 39 62 chr2 35818501 35819017 -217437566 - L1M4 LINE L1 -798 5348 4845 1277 278 112 13 chr2 35819164 35819797 -217436786 - L1M4 LINE L1 -1866 4280 3585 797 88 0 26 chr2 35819795 35819909 -217436674 - L1PA6 LINE L1 -1125 5021 4911 * 2816 60 2 3 chr2 35819893 35820405 -217436178 + L1PA6 LINE L1 5015 5524 -631 4928 80 5 1 chr2 35820505 35821167 -217435416 + L1PA6 LINE L1 5488 6151 -3 210 37 0 0 chr2 35821820 35821847 -217434736 + (TG)n Simple_repeat Simple_repeat 1 27 0 380 259 109 6 chr2 35821867 35822041 -217434542 - L1M4 LINE L1 -2609 3537 3346 2162 275 41 19 chr2 35822048 35822829 -217433754 + L1ME1 LINE L1 5365 6162 -4 42697 49 4 1 chr2 35823652 35829796 -217426787 - L1PA4 LINE L1 -1 6154 2 321 47 0 0 chr2 35833027 35833070 -217423513 + (TG)n Simple_repeat Simple_repeat 2 44 0 349 224 122 9 chr2 35834626 35834733 -217421850 - L2 LINE L2 -5 3308 3190 201 307 27 0 chr2 35834771 35834846 -217421737 + MIR SINE MIR 173 249 -13 1615 63 10 0 chr2 35834956 35835163 -217421420 - AluSp SINE Alu -12 301 93 7639 142 19 17 chr2 35836027 35836062 -217420521 - L1P LINE L1 -1061 5085 5052 1551 120 4 32 chr2 35836062 35836312 -217420271 - L1PA10 LINE L1 0 6168 5926 7639 142 19 17 chr2 35836312 35837588 -217418995 - L1P LINE L1 -1094 5052 3771 607 94 0 0 chr2 35837598 35837683 -217418900 - L1P LINE L1 -2584 3562 3478 290 79 0 0 chr2 35837692 35837730 -217418853 - L1P LINE L1 -4014 2132 2095 571 250 91 17 chr2 35837730 35837906 -217418677 - MER4E LTR ERV1 -43 723 535 180 180 33 98 chr2 35838358 35838419 -217418164 + L2 LINE L2 3179 3235 -78 23 0 0 0 chr2 35840395 35840418 -217416165 + AT_rich Low_complexity Low_complexity 1 23 0 210 220 0 85 chr2 35840473 35840532 -217416051 - L2 LINE L2 -10 3303 3250 2311 122 33 33 chr2 35840699 35841125 -217415458 + L1PB1 LINE L1 5725 6150 -1 508 275 128 9 chr2 35843497 35843715 -217412868 - MIR SINE MIR 0 262 19 479 146 0 11 chr2 35844802 35844891 -217411692 + (GGAA)n Simple_repeat Simple_repeat 3 90 0 189 0 0 0 chr2 35844901 35844922 -217411661 + (GGGGA)n Simple_repeat Simple_repeat 1 21 0 206 350 67 17 chr2 35845008 35845128 -217411455 - L2 LINE L2 -256 3057 2932 282 300 81 121 chr2 35845184 35845335 -217411248 + LTR67 LTR ERVL 57 213 -344 363 132 40 0 chr2 35845335 35845411 -217411172 + L1MA7 LINE L1 6213 6291 0 282 300 81 121 chr2 35845411 35845779 -217410804 + LTR67 LTR ERVL 213 555 -2 1576 90 43 0 chr2 35846122 35846355 -217410228 - MER75B DNA T2_type 0 243 1 328 234 103 115 chr2 35846868 35847120 -217409463 + MER112 DNA MER1_type 1 249 -11 314 259 118 35 chr2 35849124 35849294 -217407289 + L2 LINE L2 850 1033 -2281 2709 180 123 65 chr2 35849294 35850363 -217406220 - LTR12 LTR ERV1 -134 2295 31 251 363 32 45 chr2 35850365 35850522 -217406061 + L2 LINE L2 1029 1183 -2131 * 1679 305 147 23 chr2 35850519 35851415 -217405168 + L2 LINE L2 2122 3181 -132 1872 146 17 3 chr2 35851415 35851702 -217404881 - AluSx SINE Alu -21 291 1 1679 305 147 23 chr2 35851702 35851853 -217404730 + L2 LINE L2 3181 3312 -1 241 274 11 32 chr2 35852281 35852376 -217404207 - HAL1b LINE L1 -508 840 748 372 378 27 5 chr2 35852894 35853079 -217403504 + L1MEd LINE L1 464 652 -5467 260 308 146 32 chr2 35853290 35853475 -217403108 - MIR SINE MIR 0 262 57 454 276 101 68 chr2 35854476 35855020 -217401563 + MLT1F1 LTR MaLR 3 564 -3 486 301 68 11 chr2 35855503 35855679 -217400904 - MIR SINE MIR -48 214 29 2814 161 17 9 chr2 35855866 35856332 -217400251 + Tigger3b DNA MER2_type 2 471 -760 295 138 11 69 chr2 35856916 35857003 -217399580 + (TATAA)n Simple_repeat Simple_repeat 5 86 0 192 125 47 31 chr2 35857131 35857195 -217399388 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 450 331 84 38 chr2 35857228 35857878 -217398705 + L1PB4 LINE L1 1 1951 -5258 666 255 48 76 chr2 35857912 35858347 -217398236 + L1PB4 LINE L1 1911 2333 -4876 6336 191 26 19 chr2 35858372 35860675 -217395908 + L1PB4 LINE L1 4895 7214 -4 836 259 137 31 chr2 35861946 35862501 -217394082 - L1MC4a LINE L1 -1341 6467 5854 1365 294 85 41 chr2 35862579 35863168 -217393415 - MER50 LTR ERV1 -94 640 26 1300 267 71 58 chr2 35863278 35863808 -217392775 - L1MC4a LINE L1 -824 5322 5288 2281 107 3 0 chr2 35863808 35864116 -217392467 - AluSx SINE Alu -3 309 1 1300 267 71 58 chr2 35864116 35864510 -217392073 - L1MC4a LINE L1 -858 5288 4901 21 36 0 0 chr2 35865016 35865044 -217391539 + AT_rich Low_complexity Low_complexity 1 28 0 1467 207 97 0 chr2 35865179 35865488 -217391095 - MER7A DNA MER2_type 0 346 10 602 95 0 5 chr2 35866687 35866774 -217389809 - L1P4 LINE L1 -686 5477 5393 3838 126 32 3 chr2 35866774 35867090 -217389493 + L1PA15 LINE L1 5525 5830 -335 2176 52 0 4 chr2 35867090 35867361 -217389222 - AluY SINE Alu -5 306 37 3838 126 32 3 chr2 35867361 35867661 -217388922 + L1PA15 LINE L1 5830 6159 -6 602 95 0 5 chr2 35867661 35867672 -217388911 - L1P4 LINE L1 -770 5393 5383 1985 167 26 5 chr2 35868317 35868694 -217387889 - L1MA6 LINE L1 0 6300 5916 2227 81 20 0 chr2 35870036 35870331 -217386252 - AluY SINE Alu -10 301 1 929 152 104 135 chr2 35870630 35870927 -217385656 - AluJo SINE Alu -14 288 1 213 233 0 0 chr2 35872182 35872225 -217384358 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 46 0 0 0 chr2 35872244 35872290 -217384293 + AT_rich Low_complexity Low_complexity 1 46 0 1988 266 50 30 chr2 35872351 35872530 -217384053 - L1ME1 LINE L1 -96 6070 5896 13603 149 27 12 chr2 35872530 35874908 -217381675 + Tigger1 DNA MER2_type 5 2418 0 1988 266 50 30 chr2 35874908 35875661 -217380922 - L1ME1 LINE L1 -270 5896 5127 753 348 26 19 chr2 35875838 35876148 -217380435 - LTR16A LTR ERVL -16 434 123 514 395 40 5 chr2 35876715 35877118 -217379465 - ERVL LTR ERVL -827 4937 4521 237 65 0 0 chr2 35878109 35878140 -217378443 + (CA)n Simple_repeat Simple_repeat 2 32 0 287 170 38 0 chr2 35878208 35878261 -217378322 + L1MA9 LINE L1 6205 6259 -53 476 45 15 0 chr2 35878261 35878328 -217378255 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 403 249 160 6 chr2 35878583 35878764 -217377819 - L1MEd LINE L1 -4964 1155 947 259 307 57 0 chr2 35879070 35879158 -217377425 - L2 LINE L2 0 3313 3221 247 380 141 16 chr2 35879382 35879822 -217376761 - L3 LINE CR1 -103 1474 980 21 0 0 0 chr2 35879828 35879849 -217376734 + AT_rich Low_complexity Low_complexity 1 21 0 552 208 69 52 chr2 35879851 35880082 -217376501 + L1MA9 LINE L1 5902 6136 -176 1481 135 239 24 chr2 35880093 35880427 -217376156 - MSTA LTR MaLR -22 406 1 377 186 39 54 chr2 35880527 35880656 -217375927 + Charlie5 DNA MER1_type 2352 2478 -134 398 345 77 45 chr2 35880663 35881225 -217375358 - L3 LINE CR1 -571 1006 427 1063 212 141 8 chr2 35881330 35881585 -217374998 - AluJb SINE Alu -13 289 1 2124 96 14 0 chr2 35881603 35881894 -217374689 - AluSc SINE Alu -11 298 4 250 397 40 16 chr2 35882095 35882221 -217374362 + L2 LINE L2 3129 3257 -15 924 136 0 0 chr2 35884364 35884496 -217372087 + AluSq/x SINE Alu 1 132 -180 32 26 0 0 chr2 35885618 35885657 -217370926 + AT_rich Low_complexity Low_complexity 1 39 0 202 200 0 0 chr2 35886063 35886085 -217370498 + (TAA)n Simple_repeat Simple_repeat 3 24 -23 2084 139 47 85 chr2 35886085 35886530 -217370053 + MSTA LTR MaLR 1 428 0 202 200 0 0 chr2 35886530 35886552 -217370031 + (TAA)n Simple_repeat Simple_repeat 23 47 0 1252 216 4 30 chr2 35886615 35886884 -217369699 - AluJo SINE Alu -45 267 6 550 354 6 0 chr2 35887193 35887357 -217369226 - MER58A DNA MER1_type 0 165 1 2328 266 54 25 chr2 35888032 35889634 -217366949 - L1MB7 LINE L1 -10 6174 4522 2228 91 7 23 chr2 35889634 35889941 -217366642 + AluSx SINE Alu 1 302 -10 2328 266 54 25 chr2 35889941 35890057 -217366526 - L1MB7 LINE L1 -1662 4522 4411 944 280 0 5 chr2 35890057 35890268 -217366315 - MER82 DNA MER2_type 0 653 444 257 400 27 13 chr2 35890298 35890448 -217366135 + MIR SINE MIR 1 152 -110 21 0 0 0 chr2 35890467 35890488 -217366095 + AT_rich Low_complexity Low_complexity 1 21 0 241 188 29 58 chr2 35890540 35890609 -217365974 - MER82 DNA MER2_type -555 98 32 297 204 24 175 chr2 35890680 35890891 -217365692 - L1MB7 LINE L1 -1804 4342 4164 254 266 25 0 chr2 35890909 35890988 -217365595 + LTR66 LTR ERVL 394 474 -136 382 285 80 0 chr2 35891060 35891211 -217365372 - L1MB7 LINE L1 -2130 4016 3854 5103 183 18 4 chr2 35891215 35892506 -217364077 - L1PA16 LINE L1 0 6166 4852 1101 174 22 84 chr2 35892606 35892930 -217363653 + MER67D LTR ERV1 5 336 -243 7285 43 0 1 chr2 35892931 35893892 -217362691 + L1PA5 LINE L1 5183 6148 -6 526 289 119 32 chr2 35893986 35894298 -217362285 - L1MEc LINE L1 -4189 2374 2036 901 311 108 18 chr2 35894310 35894786 -217361797 - L1MEc LINE L1 -4615 1769 1213 309 51 0 0 chr2 35894786 35894825 -217361758 + (TG)n Simple_repeat Simple_repeat 2 40 0 901 311 108 18 chr2 35894825 35895023 -217361560 - L1MEc LINE L1 -5171 1213 1034 258 275 50 75 chr2 35895236 35895356 -217361227 + L2 LINE L2 3156 3272 0 421 315 47 29 chr2 35897867 35898110 -217358473 + L1ME LINE L1 5336 5579 -587 287 276 19 38 chr2 35898128 35898233 -217358350 + MER94 DNA DNA 10 112 -22 24 0 0 0 chr2 35898483 35898507 -217358076 + AT_rich Low_complexity Low_complexity 1 24 0 25 65 0 0 chr2 35898668 35898714 -217357869 + AT_rich Low_complexity Low_complexity 1 46 0 833 195 22 0 chr2 35898887 35899072 -217357511 - L1MA6 LINE L1 0 6300 6112 2020 216 115 42 chr2 35899491 35900228 -217356355 + L1ME3 LINE L1 5255 6045 -117 22 35 0 0 chr2 35900265 35900294 -217356289 + AT_rich Low_complexity Low_complexity 1 29 0 1512 234 25 50 chr2 35901328 35901678 -217354905 + MER89 LTR ERV1 172 512 -47 1833 166 65 38 chr2 35901678 35902095 -217354488 + MSTC LTR MaLR 1 428 0 1512 234 25 50 chr2 35902095 35902142 -217354441 + MER89 LTR ERV1 512 559 0 218 230 129 72 chr2 35902271 35902410 -217354173 - L2 LINE L2 -1315 1999 1853 2411 74 3 3 chr2 35902836 35903147 -217353436 + AluSp SINE Alu 3 313 0 400 332 89 26 chr2 35903291 35903481 -217353102 + MIR SINE MIR 26 227 -35 216 182 0 0 chr2 35903572 35903616 -217352967 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 284 329 42 35 chr2 35903636 35903779 -217352804 - MIR SINE MIR -82 180 37 2403 94 0 0 chr2 35903841 35904150 -217352433 + AluSc SINE Alu 1 309 0 28 61 0 0 chr2 35904825 35904874 -217351709 + AT_rich Low_complexity Low_complexity 1 49 0 27 29 0 0 chr2 35904958 35904992 -217351591 + AT_rich Low_complexity Low_complexity 1 34 0 226 235 20 0 chr2 35905602 35905653 -217350930 + MER3 DNA MER1_type 32 83 -126 9853 184 50 41 chr2 35905694 35906434 -217350149 + MER89-int LTR ERV1 23 755 -5921 13019 30 4 4 chr2 35906434 35908776 -217347807 - L1PA3 LINE L1 -3 6152 3810 9853 184 50 41 chr2 35908776 35910162 -217346421 + MER89-int LTR ERV1 755 2169 -4507 7831 199 49 19 chr2 35910150 35911795 -217344788 + MER89-int LTR ERV1 2336 4030 -2646 * 223 322 7 105 chr2 35912693 35912845 -217343738 - L3 LINE CR1 -1 1576 1440 499 211 11 22 chr2 35913419 35913599 -217342984 + GA-rich Low_complexity Low_complexity 3 180 0 232 229 34 42 chr2 35916379 35916497 -217340086 - L1ME3 LINE L1 -1 6161 6045 2395 230 51 48 chr2 35916820 35917844 -217338739 - L1ME2 LINE L1 -19 6145 5122 2305 266 39 30 chr2 35917848 35918351 -217338232 + L1ME1 LINE L1 4951 5448 -718 2137 100 0 0 chr2 35918351 35918631 -217337952 - AluSq SINE Alu -28 285 6 2305 266 39 30 chr2 35918631 35919321 -217337262 + L1ME1 LINE L1 5448 6155 -11 268 158 53 0 chr2 35919578 35919673 -217336910 + (TA)n Simple_repeat Simple_repeat 1 100 0 1969 89 0 25 chr2 35920918 35921198 -217335385 + AluY SINE Alu 26 298 -13 753 278 68 36 chr2 35921855 35922164 -217334419 + L1MC1 LINE L1 4035 4353 -1793 5022 181 37 51 chr2 35922167 35923449 -217333134 + L1MC1 LINE L1 5071 6332 -1 1768 240 50 27 chr2 35923911 35924436 -217332147 + L1MD2 LINE L1 5823 6359 0 830 219 72 39 chr2 35924430 35924736 -217331847 - L1ME2 LINE L1 -1286 4860 4545 * 2152 202 13 40 chr2 35924737 35924794 -217331789 - L1PA15-16 LINE L1 -2317 4532 4475 2228 116 0 0 chr2 35924794 35925097 -217331486 - AluSc SINE Alu -6 303 1 2152 202 13 40 chr2 35925097 35925515 -217331068 - L1PA15-16 LINE L1 -2374 4475 4070 2045 228 20 13 chr2 35925585 35926130 -217330453 - L1PA15-16 LINE L1 -4226 2623 2075 1442 224 32 1 chr2 35926156 35926471 -217330112 + L1MB5 LINE L1 5778 6100 -74 962 205 79 68 chr2 35926542 35926952 -217329631 - MER66A LTR ERV1 -13 465 97 358 108 46 15 chr2 35927037 35927102 -217329481 + L1MB5 LINE L1 6096 6162 -12 272 414 101 11 chr2 35927214 35927492 -217329091 + L2 LINE L2 2928 3230 -42 1105 248 64 15 chr2 35927499 35927826 -217328757 - MLT1A1 LTR MaLR -11 354 12 2181 94 3 3 chr2 35928061 35928359 -217328224 + AluSg SINE Alu 1 298 -12 241 257 14 0 chr2 35928502 35928576 -217328007 + T-rich Low_complexity Low_complexity 2 76 0 211 310 101 39 chr2 35928695 35928824 -217327759 - MIR SINE MIR -58 204 68 274 298 111 41 chr2 35929080 35929251 -217327332 + MIR SINE MIR 69 251 -11 471 218 0 0 chr2 35929639 35929726 -217326857 - MER44D DNA MER2_type 0 605 519 229 114 0 0 chr2 35929745 35929789 -217326794 - LTR66 LTR ERVL -173 437 394 1198 141 51 39 chr2 35929805 35930061 -217326522 - MER44D DNA MER2_type -80 529 1 395 209 9 0 chr2 35930222 35930332 -217326251 + (TG)n Simple_repeat Simple_repeat 2 112 0 994 172 47 31 chr2 35930446 35930675 -217325908 + AluJo SINE Alu 87 318 0 536 255 82 20 chr2 35931149 35931345 -217325238 - MIR SINE MIR -1 261 54 21 0 0 0 chr2 35932744 35932765 -217323818 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 35932993 35933015 -217323568 + AT_rich Low_complexity Low_complexity 1 22 0 2015 151 3 0 chr2 35934186 35934497 -217322086 - AluSx SINE Alu 0 312 1 257 297 141 49 chr2 35934502 35934687 -217321896 - MIR SINE MIR -30 232 31 314 23 23 0 chr2 35934698 35934741 -217321842 + (TTCC)n Simple_repeat Simple_repeat 1 44 0 258 314 121 7 chr2 35935933 35936073 -217320510 - MIR SINE MIR -75 187 32 355 217 14 0 chr2 35937118 35937187 -217319396 + MIR SINE MIR 151 220 -42 1862 59 0 0 chr2 35938283 35938504 -217318079 + AluY SINE Alu 80 300 -11 333 0 0 0 chr2 35938931 35938968 -217317615 + (CA)n Simple_repeat Simple_repeat 2 38 0 1733 66 9 0 chr2 35939419 35939647 -217316936 - L1PA8 LINE L1 -4 6168 5939 447 19 0 0 chr2 35940028 35940080 -217316503 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 485 343 116 0 chr2 35940841 35941074 -217315509 - MIR SINE MIR 0 262 3 299 391 31 12 chr2 35942224 35942385 -217314198 - L2 LINE L2 0 3272 3109 792 261 8 19 chr2 35942533 35942801 -217313782 + L1MA9 LINE L1 6014 6278 -34 191 383 62 13 chr2 35942950 35943177 -217313406 - L2 LINE L2 -439 2875 2638 210 222 0 0 chr2 35943194 35943248 -217313335 + (TA)n Simple_repeat Simple_repeat 1 54 0 22 0 0 0 chr2 35944165 35944187 -217312396 + AT_rich Low_complexity Low_complexity 1 22 0 1274 198 0 0 chr2 35944740 35944988 -217311595 + L1PA13 LINE L1 5912 6159 -4 234 219 0 0 chr2 35946549 35946613 -217309970 + GA-rich Low_complexity Low_complexity 2 65 0 239 271 0 0 chr2 35947201 35947264 -217309319 + polypurine Low_complexity Low_complexity 1 63 0 198 303 0 135 chr2 35947823 35947912 -217308671 - L2 LINE L2 -96 3176 3100 37 23 0 0 chr2 35951187 35951231 -217305352 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr2 35951476 35951498 -217305085 + AT_rich Low_complexity Low_complexity 1 22 0 1449 325 49 60 chr2 35951797 35952670 -217303913 + L1MEc LINE L1 38 918 -5478 2152 146 14 30 chr2 35952670 35953040 -217303543 - THE1B LTR MaLR 0 364 1 1449 325 49 60 chr2 35953040 35954216 -217302367 + L1MEc LINE L1 918 2066 -4330 6100 195 42 16 chr2 35954223 35955484 -217301099 + L1MA1 LINE L1 16 1309 -6256 6300 162 53 8 chr2 35955485 35957601 -217298982 + L1MA1 LINE L1 5496 7717 -4 21 0 0 0 chr2 35957601 35957622 -217298961 + AT_rich Low_complexity Low_complexity 1 21 0 2327 98 0 0 chr2 35957622 35957929 -217298654 + AluSg SINE Alu 1 307 -3 386 274 91 48 chr2 35957947 35958155 -217298428 + L1MEc LINE L1 2053 2269 -4127 378 236 47 16 chr2 35958220 35958347 -217298236 + L1MCc LINE L1 39 169 -6254 412 235 77 77 chr2 35958350 35958498 -217298085 + L1MCc LINE L1 279 429 -5994 1928 135 21 0 chr2 35958498 35958786 -217297797 + AluSq SINE Alu 1 294 -19 412 235 77 77 chr2 35958786 35958807 -217297776 + L1MCc LINE L1 428 448 -5975 213 121 0 0 chr2 35958809 35958842 -217297741 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 1042 79 23 17 chr2 35958844 35959021 -217297562 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 1534 306 74 34 chr2 35959403 35961275 -217295308 + L1MCc LINE L1 807 2959 -4163 731 274 33 62 chr2 35961318 35961672 -217294911 + L1MCc LINE L1 4082 4422 -2519 2270 121 0 0 chr2 35961672 35961979 -217294604 - AluSg SINE Alu -3 307 1 731 274 33 62 chr2 35961979 35962076 -217294507 + L1MCc LINE L1 4422 4520 -2421 302 175 12 25 chr2 35962090 35962170 -217294413 + L1ME2 LINE L1 6085 6163 -1 3241 226 51 6 chr2 35963381 35964199 -217292384 - L1MB7 LINE L1 -1 6681 5827 2371 243 15 19 chr2 35964212 35964886 -217291697 - L1MB7 LINE L1 -1858 4786 4116 462 269 22 0 chr2 35964914 35965048 -217291535 - L1MB7 LINE L1 -6384 158 22 255 298 0 0 chr2 35965223 35965280 -217291303 - L2 LINE L2 -2 3270 3214 23 20 0 61 chr2 35966008 35966057 -217290526 + AT_rich Low_complexity Low_complexity 1 46 0 1709 127 0 4 chr2 35966571 35966870 -217289713 + AluSx SINE Alu 51 348 0 186 196 54 18 chr2 35966870 35966926 -217289657 + MER5C DNA MER1_type 153 210 -114 733 286 112 0 chr2 35967827 35968051 -217288532 - MIR SINE MIR -13 249 1 380 355 44 47 chr2 35969252 35969548 -217287035 - L3 LINE CR1 -4 1573 1279 1982 111 27 0 chr2 35969864 35970162 -217286421 + L1PA13 LINE L1 5858 6163 0 24 0 0 0 chr2 35970447 35970471 -217286112 + AT_rich Low_complexity Low_complexity 1 24 0 2117 155 19 16 chr2 35971210 35971584 -217284999 + THE1C LTR MaLR 1 375 0 204 233 17 0 chr2 35972346 35972406 -217284177 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 189 0 0 0 chr2 35973263 35973284 -217283299 + (ACTG)n Simple_repeat Simple_repeat 4 24 0 275 298 35 70 chr2 35973840 35973954 -217282629 + MIR SINE MIR 16 125 -137 2869 323 107 62 chr2 35975387 35977542 -217279041 + L2 LINE L2 256 2651 -662 266 164 0 49 chr2 35977542 35977603 -217278980 - L1MA9 LINE L1 -30 6282 6225 2869 323 107 62 chr2 35977603 35978298 -217278285 + L2 LINE L2 2651 3313 0 195 204 0 0 chr2 35978706 35978755 -217277828 + (TG)n Simple_repeat Simple_repeat 1 49 0 1473 149 8 12 chr2 35978793 35979041 -217277542 + AluSx SINE Alu 50 296 -16 400 304 110 13 chr2 35979327 35979554 -217277029 + MIR SINE MIR 9 257 -5 1926 181 24 3 chr2 35980409 35980791 -217275792 + MLT1B LTR MaLR 1 390 0 30 27 0 0 chr2 35981136 35981173 -217275410 + AT_rich Low_complexity Low_complexity 1 37 0 2195 130 42 10 chr2 35981173 35981339 -217275244 - L1MA1 LINE L1 0 6302 6143 400 175 0 0 chr2 35981339 35981419 -217275164 + MADE1 DNA Mariner 1 80 0 2195 130 42 10 chr2 35981419 35981653 -217274930 - L1MA1 LINE L1 -159 6143 5889 19626 179 22 21 chr2 35981653 35984212 -217272371 - L1MA1 LINE L1 -342 7379 4824 2397 72 0 7 chr2 35984212 35984516 -217272067 + AluY SINE Alu 1 302 -9 19626 179 22 21 chr2 35984516 35985134 -217271449 - L1MA1 LINE L1 -2897 4824 4208 264 209 0 0 chr2 35985134 35985177 -217271406 + 5S rRNA rRNA 1 43 -78 19626 179 22 21 chr2 35985177 35989331 -217267252 - L1MA1 LINE L1 -3513 4208 1 2618 163 59 12 chr2 35989394 35989999 -217266584 + L1MA5 LINE L1 5164 5791 -509 301 154 64 6 chr2 35990003 35990101 -217266482 + (TA)n Simple_repeat Simple_repeat 2 114 -52 2503 171 28 6 chr2 35990101 35990599 -217265984 + L1MA5 LINE L1 5786 6294 -6 301 154 64 6 chr2 35990599 35990656 -217265927 + (TA)n Simple_repeat Simple_repeat 114 166 0 237 178 0 0 chr2 35991096 35991141 -217265442 + (TG)n Simple_repeat Simple_repeat 2 46 0 324 394 59 36 chr2 35992329 35992717 -217263866 - L2 LINE L2 -4 3268 2872 1050 248 79 57 chr2 35992798 35993254 -217263329 - MLT1C LTR MaLR -1 466 1 187 343 39 10 chr2 35993337 35993439 -217263144 - L2 LINE L2 -938 2376 2272 348 245 46 22 chr2 35993579 35993703 -217262880 - MER63 DNA MER1_type -312 748 1 1054 197 5 0 chr2 35993788 35993986 -217262597 + L1PBa LINE L1 2 200 -6663 * 8644 206 10 13 chr2 35993964 35996780 -217259803 + L1PBa LINE L1 618 3644 -3218 2258 75 3 0 chr2 35996780 35997072 -217259511 + AluY SINE Alu 3 295 -16 8644 206 10 13 chr2 35997072 35997453 -217259130 + L1PBa LINE L1 3644 4025 -2837 502 191 0 0 chr2 35997535 35997629 -217258954 - MLT1D LTR MaLR -4 501 408 1129 261 61 71 chr2 35997629 35998119 -217258464 + MLT2B1 LTR ERVL 2 486 -34 793 170 0 14 chr2 35998132 35998273 -217258310 + L1PB4 LINE L1 6006 6144 -12 570 251 78 14 chr2 35999650 35999869 -217256714 - MER96B DNA MER1_type? 0 417 185 233 165 20 0 chr2 35999939 35999995 -217256588 - L1MA2 LINE L1 0 6304 6249 1618 177 35 29 chr2 35999996 36000306 -217256277 - AluJo SINE Alu 0 312 1 25 0 0 0 chr2 36000306 36000331 -217256252 + AT_rich Low_complexity Low_complexity 1 25 0 25 99 0 0 chr2 36000405 36000486 -217256097 + AT_rich Low_complexity Low_complexity 1 81 0 283 254 64 27 chr2 36000603 36000713 -217255870 + MER96B DNA MER1_type? 294 407 -10 26 50 0 0 chr2 36001106 36001146 -217255437 + AT_rich Low_complexity Low_complexity 1 40 0 899 187 34 5 chr2 36002177 36002396 -217254187 - L1MC3 LINE L1 -11 7756 6110 4557 193 61 2 chr2 36002749 36003659 -217252924 - L1MA4 LINE L1 -12 6288 5434 2969 106 33 31 chr2 36003659 36004139 -217252444 + L1PA14 LINE L1 5669 6152 -9 4557 193 61 2 chr2 36004139 36004183 -217252400 - L1MA4 LINE L1 -866 5434 5394 411 21 0 0 chr2 36004183 36004231 -217252352 + (ATG)n Simple_repeat Simple_repeat 2 49 0 4557 193 61 2 chr2 36004231 36004419 -217252164 - L1MA4 LINE L1 -906 5394 5101 4269 187 22 3 chr2 36004414 36005314 -217251269 - L1MA4 LINE L1 -1551 4595 3679 * 1427 211 44 35 chr2 36005330 36005671 -217250912 - L1MC3 LINE L1 -351 7434 7091 5911 206 26 14 chr2 36005671 36007386 -217249197 - L1PA16 LINE L1 -6 6160 4414 1881 138 58 25 chr2 36007386 36007749 -217248834 - THE1C LTR MaLR 0 375 1 5911 206 26 14 chr2 36007749 36008385 -217248198 - L1PA16 LINE L1 -1752 4414 3787 603 210 12 6 chr2 36008854 36009021 -217247562 + CT-rich Low_complexity Low_complexity 1 168 0 230 139 0 0 chr2 36009022 36009058 -217247525 + (TCC)n Simple_repeat Simple_repeat 3 38 0 199 120 20 20 chr2 36009058 36009108 -217247475 + CT-rich Low_complexity Low_complexity 2 51 0 28 61 0 0 chr2 36010164 36010213 -217246370 + AT_rich Low_complexity Low_complexity 1 49 0 241 305 57 43 chr2 36010248 36010389 -217246194 - MIR SINE MIR -44 218 76 3320 183 29 19 chr2 36011234 36011856 -217244727 + L1 LINE L1 52 679 -6886 10114 185 73 4 chr2 36011857 36014143 -217242440 + L1 LINE L1 4118 6561 -1004 363 338 60 66 chr2 36014300 36014884 -217241699 - L2 LINE L2 -217 3055 2478 446 331 8 8 chr2 36015138 36015265 -217241318 + L2 LINE L2 3182 3308 -5 2134 114 7 7 chr2 36015392 36015699 -217240884 - AluSx SINE Alu -5 307 1 315 239 0 14 chr2 36016051 36016122 -217240461 + MLT1C LTR MaLR 398 467 0 21 0 0 0 chr2 36017259 36017280 -217239303 + AT_rich Low_complexity Low_complexity 1 21 0 328 236 55 0 chr2 36017365 36017492 -217239091 + (TA)n Simple_repeat Simple_repeat 2 135 0 524 248 57 0 chr2 36017821 36017962 -217238621 + Charlie1b DNA MER1_type 49 197 -326 221 184 0 20 chr2 36019525 36019574 -217237009 + CT-rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr2 36019879 36019902 -217236681 + AT_rich Low_complexity Low_complexity 1 23 0 2911 155 20 65 chr2 36020268 36020908 -217235675 - LTR38B LTR ERV1 0 611 1 26 0 0 0 chr2 36021754 36021780 -217234803 + AT_rich Low_complexity Low_complexity 1 26 0 542 324 55 66 chr2 36021954 36022423 -217234160 - L1M4 LINE L1 -2130 4016 3553 988 124 98 0 chr2 36022505 36022658 -217233925 + THE1B LTR MaLR 1 168 -196 216 149 0 0 chr2 36022658 36022705 -217233878 + (T)n Simple_repeat Simple_repeat 1 47 0 5024 17 2 0 chr2 36022708 36023285 -217233298 - L1HS LINE L1 -1 6154 5577 1091 148 23 51 chr2 36023285 36023501 -217233082 + THE1B LTR MaLR 155 364 0 23 0 0 0 chr2 36023582 36023605 -217232978 + AT_rich Low_complexity Low_complexity 1 23 0 249 314 40 32 chr2 36023959 36024083 -217232500 - MIR SINE MIR -130 132 8 453 110 0 0 chr2 36024725 36024798 -217231785 + (CA)n Simple_repeat Simple_repeat 2 74 0 927 209 121 41 chr2 36024799 36025114 -217231469 + MER2 DNA MER2_type 2 341 -3 261 139 0 0 chr2 36025129 36025172 -217231411 + (TG)n Simple_repeat Simple_repeat 2 44 0 236 247 0 67 chr2 36025227 36025316 -217231267 + L1MC4 LINE L1 6615 6697 -1345 507 256 0 87 chr2 36025317 36025512 -217231071 + (TG)n Simple_repeat Simple_repeat 2 179 0 305 286 0 31 chr2 36025524 36025622 -217230961 + (TG)n Simple_repeat Simple_repeat 2 96 0 259 264 0 29 chr2 36025634 36025808 -217230775 + (TG)n Simple_repeat Simple_repeat 2 170 0 421 285 0 34 chr2 36025820 36026179 -217230404 + (TG)n Simple_repeat Simple_repeat 1 346 0 213 220 0 20 chr2 36026194 36026244 -217230339 + (TG)n Simple_repeat Simple_repeat 2 50 0 214 229 0 24 chr2 36026256 36026339 -217230244 + (TG)n Simple_repeat Simple_repeat 2 82 0 239 310 0 30 chr2 36026351 36026451 -217230132 + (TG)n Simple_repeat Simple_repeat 2 98 0 274 248 6 25 chr2 36026463 36026620 -217229963 + (TG)n Simple_repeat Simple_repeat 1 154 0 196 238 33 33 chr2 36026635 36026786 -217229797 + (TATATG)n Simple_repeat Simple_repeat 2 152 0 496 289 6 33 chr2 36026829 36027009 -217229574 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 450 225 30 6 chr2 36027027 36027196 -217229387 + (TA)n Simple_repeat Simple_repeat 2 174 0 414 296 67 67 chr2 36027876 36027971 -217228612 + L2 LINE L2 3074 3168 -145 230 81 27 0 chr2 36027971 36028008 -217228575 + (TA)n Simple_repeat Simple_repeat 2 39 0 414 296 67 67 chr2 36028008 36028152 -217228431 + L2 LINE L2 3167 3313 0 339 304 81 71 chr2 36028571 36028880 -217227703 + MLT1J LTR MaLR 135 446 -65 1806 127 3 48 chr2 36028956 36029102 -217227481 + AluSc SINE Alu 1 127 -182 225 0 0 0 chr2 36029102 36029127 -217227456 + (TA)n Simple_repeat Simple_repeat 1 25 0 1806 127 3 48 chr2 36029127 36029294 -217227289 + AluSc SINE Alu 127 300 -9 410 332 72 21 chr2 36029294 36029487 -217227096 + MIR SINE MIR 59 261 -1 490 246 58 0 chr2 36030242 36030413 -217226170 + L1MA7 LINE L1 6107 6287 -4 2215 71 35 3 chr2 36030424 36030707 -217225876 - AluY SINE Alu -17 294 3 203 146 24 0 chr2 36030876 36030917 -217225666 + (TG)n Simple_repeat Simple_repeat 1 42 0 23 0 0 0 chr2 36031295 36031318 -217225265 + AT_rich Low_complexity Low_complexity 1 23 0 1973 216 90 4 chr2 36032896 36033374 -217223209 + LTR53 LTR ERVL 1 519 0 2392 84 0 0 chr2 36033382 36033678 -217222905 - AluSq SINE Alu -16 297 2 2403 138 95 7 chr2 36036003 36036415 -217220168 + LTR7 LTR ERV1 1 448 -2 17363 111 43 53 chr2 36036417 36039431 -217217152 + HERVH LTR ERV1 1 2984 -4729 912 129 27 0 chr2 36039428 36039575 -217217008 + HERVH LTR ERV1 3140 3290 -4423 * 3197 120 10 8 chr2 36039565 36040073 -217216510 + HERVH LTR ERV1 3492 4000 -3713 * 4353 137 6 1 chr2 36040067 36040726 -217215857 + HERVH LTR ERV1 4488 5149 -2564 1320 148 19 0 chr2 36040727 36040943 -217215640 + HERVH LTR ERV1 5600 5819 -1894 * 2333 111 48 13 chr2 36040941 36041320 -217215263 + HERVH LTR ERV1 7322 7713 0 2741 76 98 2 chr2 36041320 36041729 -217214854 + LTR7 LTR ERV1 1 448 -2 220 349 132 8 chr2 36041729 36041858 -217214725 - MIR SINE MIR -98 164 20 1361 157 62 115 chr2 36043916 36044273 -217212310 - MER7A DNA MER2_type -10 336 1 22 0 0 0 chr2 36044410 36044432 -217212151 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 36044913 36044945 -217211638 + AT_rich Low_complexity Low_complexity 1 32 0 269 271 177 57 chr2 36045046 36045238 -217211345 - MIR SINE MIR -27 235 21 302 45 23 0 chr2 36045626 36045670 -217210913 + (TG)n Simple_repeat Simple_repeat 2 46 0 26 0 0 0 chr2 36045730 36045756 -217210827 + AT_rich Low_complexity Low_complexity 1 26 0 275 198 18 18 chr2 36046341 36046452 -217210131 + (TA)n Simple_repeat Simple_repeat 1 111 0 2752 87 90 2 chr2 36046670 36047082 -217209501 - LTR7 LTR ERV1 -2 448 1 7579 103 37 5 chr2 36047088 36048228 -217208355 - HERVH LTR ERV1 -9 7704 6529 4170 93 2 2 chr2 36048201 36048813 -217207770 - HERVH LTR ERV1 -1333 6380 5769 * 1182 118 38 0 chr2 36048799 36048985 -217207598 - HERVH LTR ERV1 -3033 4680 4488 * 3184 121 18 6 chr2 36048987 36049483 -217207100 - HERVH LTR ERV1 -3720 3993 3492 911 135 7 0 chr2 36049475 36049623 -217206960 - HERVH LTR ERV1 -4425 3288 3140 * 14945 115 14 23 chr2 36049617 36052497 -217204086 - HERVH LTR ERV1 -4726 2987 1 2464 80 11 25 chr2 36052505 36052908 -217203675 - LTR7 LTR ERV1 -8 442 1 1556 240 86 31 chr2 36053035 36053490 -217203093 - MLT2B1 LTR ERVL -40 480 1 277 320 60 10 chr2 36053737 36053837 -217202746 + MER5A DNA MER1_type 3 107 -82 412 234 105 23 chr2 36054265 36054436 -217202147 + L1MC4a LINE L1 5700 5884 -1924 209 250 0 18 chr2 36054443 36054499 -217202084 + (TA)n Simple_repeat Simple_repeat 2 56 0 2406 68 14 0 chr2 36054696 36054991 -217201592 + AluY SINE Alu 4 302 -9 1081 191 4 33 chr2 36056154 36056426 -217200157 - Tigger6a DNA MER2_type -1 1082 819 495 209 72 46 chr2 36056736 36056778 -217199805 + L1MD2 LINE L1 6089 6128 -231 192 40 0 0 chr2 36056778 36056803 -217199780 + (CA)n Simple_repeat Simple_repeat 2 26 0 495 209 72 46 chr2 36056803 36056913 -217199670 + L1MD2 LINE L1 6128 6245 -114 3523 203 47 26 chr2 36056917 36057725 -217198858 - Tigger6a DNA MER2_type -258 825 1 540 144 58 29 chr2 36058744 36058883 -217197700 - Tigger6 DNA MER2_type -147 1450 1308 3750 159 35 5 chr2 36059990 36060739 -217195844 - L1MA4 LINE L1 -1 6299 5529 1638 233 103 24 chr2 36060804 36061272 -217195311 - MLT1D LTR MaLR 0 505 1 233 245 0 0 chr2 36061837 36061890 -217194693 + A-rich Low_complexity Low_complexity 1 53 0 2665 77 6 3 chr2 36061916 36062268 -217194315 + THE1A LTR MaLR 3 355 0 2052 122 27 0 chr2 36062858 36063152 -217193431 - AluSx SINE Alu -10 302 1 1655 143 4 8 chr2 36063954 36064206 -217192377 + AluSx SINE Alu 1 251 -61 2487 70 0 6 chr2 36064631 36064944 -217191639 - AluY SINE Alu 0 311 1 10824 163 14 29 chr2 36065365 36068718 -217187865 + L1PA8A LINE L1 1 3360 -3101 8136 133 13 9 chr2 36068720 36070757 -217185826 + L1PA8A LINE L1 4407 6445 -1 558 207 117 5 chr2 36070787 36070975 -217185608 - L1M4 LINE L1 -809 5337 5129 346 354 132 0 chr2 36071107 36071350 -217185233 - HAL1 LINE L1 -854 1653 1379 391 282 126 15 chr2 36071392 36071654 -217184929 - L1MEd LINE L1 -4936 1183 893 275 359 41 15 chr2 36071726 36071921 -217184662 - L1MEd LINE L1 -5460 659 460 2233 124 5 42 chr2 36071933 36072311 -217184272 - THE1B LTR MaLR 0 364 1 11342 101 12 1 chr2 36072311 36073873 -217182710 - THE1B-int LTR MaLR 0 1580 1 2313 128 8 16 chr2 36073873 36074240 -217182343 - THE1B LTR MaLR 0 364 1 183 129 0 0 chr2 36074425 36074456 -217182127 + (TAA)n Simple_repeat Simple_repeat 2 32 0 2153 241 51 69 chr2 36075446 36075559 -217181024 - L1ME1 LINE L1 -5 6161 6047 2206 92 7 0 chr2 36075559 36075854 -217180729 - AluY SINE Alu -14 297 1 2153 241 51 69 chr2 36075854 36076788 -217179795 - L1ME1 LINE L1 -119 6047 5146 * 3994 181 29 35 chr2 36076772 36077033 -217179550 - L1MB1 LINE L1 0 6168 5907 2305 101 0 0 chr2 36077033 36077331 -217179252 - AluSq SINE Alu -15 298 1 3994 181 29 35 chr2 36077331 36078135 -217178448 - L1MB1 LINE L1 -261 5907 5106 1591 228 75 11 chr2 36078125 36078244 -217178339 - L1MB1 LINE L1 -1768 4378 4268 * 231 114 0 0 chr2 36078244 36078279 -217178304 + (TG)n Simple_repeat Simple_repeat 2 36 0 1591 228 75 11 chr2 36078279 36078629 -217177954 - L1MB1 LINE L1 -1878 4268 3879 611 226 171 13 chr2 36078627 36078866 -217177717 + L1 LINE L1 3424 3700 -2446 * 9991 259 49 11 chr2 36078862 36081725 -217174858 - L1PA13 LINE L1 -3821 2976 2 6161 102 12 8 chr2 36081729 36082628 -217173955 + L1PA13 LINE L1 5260 6162 -1 619 215 0 14 chr2 36082618 36082762 -217173821 + L1 LINE L1 3681 3822 -2324 * 1604 172 4 4 chr2 36082806 36083074 -217173509 - AluSq SINE Alu -14 299 32 495 281 61 37 chr2 36083074 36083320 -217173263 - L1 LINE L1 -1159 4987 4736 319 286 0 0 chr2 36083301 36083413 -217173170 - L1MB1 LINE L1 -2441 3705 3594 * 25 0 0 0 chr2 36084271 36084296 -217172287 + AT_rich Low_complexity Low_complexity 1 25 0 303 266 128 9 chr2 36084509 36084618 -217171965 - MIR SINE MIR -38 224 103 26 50 0 0 chr2 36084619 36084659 -217171924 + AT_rich Low_complexity Low_complexity 1 40 0 24 53 0 0 chr2 36085347 36085385 -217171198 + AT_rich Low_complexity Low_complexity 1 38 0 512 316 106 5 chr2 36085703 36085921 -217170662 - MIR SINE MIR -5 257 18 312 294 40 16 chr2 36085923 36086049 -217170534 + MER94 DNA DNA 5 133 -1 22 35 0 0 chr2 36086355 36086384 -217170199 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr2 36087534 36087563 -217169020 + AT_rich Low_complexity Low_complexity 1 29 0 207 220 0 0 chr2 36087681 36087731 -217168852 + (TA)n Simple_repeat Simple_repeat 2 51 0 202 200 0 0 chr2 36089002 36089042 -217167541 + (CA)n Simple_repeat Simple_repeat 2 41 0 25 31 0 0 chr2 36089429 36089461 -217167122 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr2 36089544 36089572 -217167011 + AT_rich Low_complexity Low_complexity 1 28 0 21 71 0 0 chr2 36090242 36090284 -217166299 + AT_rich Low_complexity Low_complexity 1 42 0 27 62 0 0 chr2 36090633 36090681 -217165902 + AT_rich Low_complexity Low_complexity 1 48 0 24 53 0 0 chr2 36090885 36090923 -217165660 + AT_rich Low_complexity Low_complexity 1 38 0 192 200 0 0 chr2 36091077 36091127 -217165456 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 562 241 15 0 chr2 36091204 36091341 -217165242 + MLT2B1 LTR ERVL 382 520 0 2128 263 73 5 chr2 36092678 36093476 -217163107 - L1MB1 LINE L1 -2896 3250 2399 * 4814 203 29 12 chr2 36093475 36095542 -217161041 + L1PA16 LINE L1 4060 6157 -9 24 0 0 0 chr2 36095544 36095568 -217161015 + AT_rich Low_complexity Low_complexity 1 24 0 789 244 37 63 chr2 36095667 36095937 -217160646 - MLT2B1 LTR ERVL -253 267 5 351 272 114 80 chr2 36096033 36096357 -217160226 - L1ME3A LINE L1 -225 6205 5871 340 239 33 0 chr2 36096376 36096468 -217160115 - L1ME3A LINE L1 -1290 5116 5022 741 275 109 67 chr2 36096479 36097109 -217159474 - L1ME3A LINE L1 -1438 4968 4312 361 318 53 5 chr2 36097485 36097674 -217158909 + LTR67 LTR ERVL 360 557 0 870 324 93 15 chr2 36097781 36098253 -217158330 + L2 LINE L2 1613 2121 -1193 223 313 54 54 chr2 36098341 36098565 -217158018 + L2 LINE L2 3082 3305 -8 1869 268 73 53 chr2 36098887 36100434 -217156149 - L1MDb LINE L1 -4128 2278 748 1589 168 39 95 chr2 36101041 36101451 -217155132 + MER39 LTR ERV1 319 705 -2 378 224 93 0 chr2 36101682 36101789 -217154794 + MIR SINE MIR 134 250 -12 339 233 25 64 chr2 36102193 36102340 -217154243 + Charlie8 DNA MER1_type 140 271 -2146 2323 56 3 13 chr2 36102382 36102684 -217153899 - AluY SINE Alu -12 299 1 348 314 163 13 chr2 36102921 36103074 -217153509 - MER5A DNA MER1_type 0 189 14 22 56 0 0 chr2 36104526 36104562 -217152021 + AT_rich Low_complexity Low_complexity 1 36 0 410 339 106 34 chr2 36106126 36106513 -217150070 + Charlie2 DNA MER1_type 170 584 -2278 234 91 0 0 chr2 36106536 36106569 -217150014 + (TC)n Simple_repeat Simple_repeat 2 34 0 303 216 24 24 chr2 36106569 36106694 -217149889 + (TA)n Simple_repeat Simple_repeat 2 126 0 226 302 0 0 chr2 36106710 36106773 -217149810 + Charlie2b DNA MER1_type 1244 1306 -1476 2249 192 75 0 chr2 36106819 36107314 -217149269 + L1MA10 LINE L1 5793 6324 -10 206 174 22 0 chr2 36109137 36109183 -217147400 + (TA)n Simple_repeat Simple_repeat 2 48 0 24 85 0 0 chr2 36110591 36110650 -217145933 + AT_rich Low_complexity Low_complexity 1 59 0 768 183 53 140 chr2 36111249 36111534 -217145049 + MLT1D-int LTR MaLR 1112 1371 0 1459 236 44 16 chr2 36111663 36112066 -217144517 + MLT1D LTR MaLR 90 593 0 429 279 144 14 chr2 36112689 36112904 -217143679 - HAL1b LINE L1 -7 1341 1099 24 32 0 0 chr2 36112908 36112939 -217143644 + AT_rich Low_complexity Low_complexity 1 31 0 234 149 0 45 chr2 36113530 36113597 -217142986 + (TA)n Simple_repeat Simple_repeat 1 64 0 21 0 0 0 chr2 36113635 36113656 -217142927 + AT_rich Low_complexity Low_complexity 1 21 0 229 293 9 94 chr2 36113785 36113891 -217142692 - L2 LINE L2 -22 3291 3195 1041 264 106 10 chr2 36114226 36114707 -217141876 - L1M4 LINE L1 -1734 4412 3886 811 203 46 10 chr2 36114709 36114983 -217141600 - L1M LINE L1 -736 5426 5136 2077 88 7 14 chr2 36114983 36115280 -217141303 - AluSc SINE Alu -14 295 1 811 203 46 10 chr2 36115280 36115332 -217141251 - L1M LINE L1 -1026 5136 5087 1963 151 35 12 chr2 36115332 36115353 -217141230 + THE1B LTR MaLR 13 32 -332 218 56 28 0 chr2 36115353 36115389 -217141194 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1963 151 35 12 chr2 36115389 36115711 -217140872 + THE1B LTR MaLR 32 364 0 1450 269 108 21 chr2 36115732 36116554 -217140029 - L1M4 LINE L1 -1110 5036 4143 1942 108 0 37 chr2 36116561 36116856 -217139727 - AluSx SINE Alu -2 310 27 1849 182 16 148 chr2 36116856 36117498 -217139085 - LTR6A LTR ERV1 -1 563 1 242 174 22 0 chr2 36117498 36117544 -217139039 - Alu SINE Alu -136 164 118 2409 246 128 46 chr2 36117545 36119020 -217137563 - L1M4 LINE L1 -1993 4153 2558 1226 271 48 28 chr2 36119028 36119426 -217137157 - MLT1E2 LTR MaLR 0 626 221 591 201 84 70 chr2 36119441 36119699 -217136884 - MLT1E3 LTR MaLR -263 242 4 695 248 57 27 chr2 36119712 36120043 -217136540 - L1M4 LINE L1 -3603 2543 2203 350 312 52 13 chr2 36120377 36120531 -217136052 + L1ME3 LINE L1 123 282 -6114 2090 153 8 16 chr2 36120783 36121161 -217135422 - THE1C LTR MaLR 0 375 1 368 300 97 24 chr2 36121489 36121912 -217134671 + L1ME3 LINE L1 4461 4914 -1301 315 236 16 98 chr2 36122232 36122355 -217134228 + L1ME3 LINE L1 5354 5466 -962 7452 35 0 0 chr2 36122407 36123596 -217132987 - L1PA4 LINE L1 0 6155 4970 374 302 147 41 chr2 36123622 36123963 -217132620 + L1ME3 LINE L1 5551 5931 -300 189 297 27 27 chr2 36124291 36124365 -217132218 - MIR SINE MIR -157 105 32 521 282 39 11 chr2 36124919 36125100 -217131483 + LTR41 LTR ERVL 2 187 -586 392 278 110 38 chr2 36125256 36125465 -217131118 + LTR41 LTR ERVL 549 772 -1 2397 53 0 43 chr2 36127300 36127623 -217128960 + AluY SINE Alu 1 309 -2 3340 93 10 18 chr2 36129650 36130145 -217126438 - L1PA13 LINE L1 -2 6161 5671 1410 204 86 10 chr2 36130145 36130458 -217126125 + MLT1A1 LTR MaLR 29 365 0 1061 197 5 0 chr2 36130781 36130969 -217125614 + MLT1B LTR MaLR 202 390 0 2095 302 130 37 chr2 36131246 36132814 -217123769 + L2 LINE L2 1557 3313 0 188 304 0 0 chr2 36132980 36133026 -217123557 + MIR SINE MIR 106 151 -111 326 280 112 11 chr2 36133658 36133857 -217122726 - L1ME3A LINE L1 -217 5945 5727 382 138 0 0 chr2 36133969 36134034 -217122549 + L1PA16 LINE L1 5724 5788 -380 195 49 73 0 chr2 36134038 36134079 -217122504 + (TA)n Simple_repeat Simple_repeat 1 44 0 1964 194 8 0 chr2 36134080 36134461 -217122122 + L1PA16 LINE L1 5783 6166 0 536 255 58 82 chr2 36134475 36135041 -217121542 - L1ME3A LINE L1 -601 5565 5011 271 347 111 31 chr2 36135224 36135512 -217121071 - L2 LINE L2 -1647 1667 1357 494 354 92 0 chr2 36136825 36137065 -217119518 + MIR SINE MIR 1 262 0 265 197 0 42 chr2 36137179 36137250 -217119333 + (TA)n Simple_repeat Simple_repeat 1 68 0 26 50 0 0 chr2 36137391 36137431 -217119152 + AT_rich Low_complexity Low_complexity 1 40 0 823 184 14 48 chr2 36137570 36137777 -217118806 - L1MC2 LINE L1 -11 6333 6134 729 256 6 0 chr2 36137779 36137947 -217118636 - L1MC2 LINE L1 -499 5845 5677 385 82 0 0 chr2 36137948 36137997 -217118586 + THE1B LTR MaLR 314 362 -2 9303 117 53 3 chr2 36137999 36139430 -217117153 + THE1B-int LTR MaLR 1 1502 -78 799 186 0 111 chr2 36139531 36139730 -217116853 - L1PA16 LINE L1 -17 6149 5973 375 183 0 0 chr2 36139730 36139801 -217116782 + Charlie1 DNA MER1_type 2186 2256 -505 21 36 0 0 chr2 36140038 36140066 -217116517 + AT_rich Low_complexity Low_complexity 1 28 0 289 297 80 9 chr2 36140091 36140138 -217116445 - MIR SINE MIR -19 243 201 1684 142 85 3 chr2 36140138 36140468 -217116115 - MER46B DNA MER2_type -4 232 1 289 297 80 9 chr2 36140468 36140596 -217115987 - MIR SINE MIR -61 201 6 282 203 241 0 chr2 36140840 36140919 -217115664 - MER45 DNA AcHobo -58 120 23 361 200 60 30 chr2 36141328 36141428 -217115155 - L1MC4 LINE L1 -12 8030 7928 216 0 0 0 chr2 36141522 36141546 -217115037 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1924 97 61 21 chr2 36141563 36141842 -217114741 - AluSg SINE Alu -20 290 1 280 293 131 50 chr2 36142043 36142265 -217114318 + MIR SINE MIR 8 247 -15 3418 126 26 0 chr2 36143193 36143731 -217112852 - L1P3 LINE L1 -5323 552 1 1739 125 0 8 chr2 36144154 36144418 -217112165 + AluY SINE Alu 3 264 -47 1903 247 65 66 chr2 36146470 36147596 -217108987 - L1M4c LINE L1 -3998 2565 1296 24 0 0 0 chr2 36147949 36147973 -217108610 + AT_rich Low_complexity Low_complexity 1 24 0 709 237 30 10 chr2 36149001 36149199 -217107384 + MSTA LTR MaLR 227 428 0 2029 261 57 7 chr2 36149215 36149957 -217106626 - L1MEc LINE L1 -2652 3563 2785 721 302 97 36 chr2 36149953 36150450 -217106133 - L1MEc LINE L1 -5531 865 339 * 207 0 0 0 chr2 36150627 36150650 -217105933 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2343 71 3 3 chr2 36150654 36150949 -217105634 - AluY SINE Alu -16 295 1 627 290 89 33 chr2 36151071 36151581 -217105002 + L1ME3A LINE L1 5366 5940 -230 387 206 160 15 chr2 36151754 36151885 -217104698 - MER74C LTR ERVL -309 151 2 2749 256 57 50 chr2 36151885 36153308 -217103275 + L1ME LINE L1 2448 3880 -2266 552 233 114 11 chr2 36154170 36154346 -217102237 + L1ME LINE L1 5598 5791 -379 230 209 0 0 chr2 36154394 36154437 -217102146 + L1MC/D LINE L1 5686 5728 -605 31 26 0 0 chr2 36156468 36156506 -217100077 + AT_rich Low_complexity Low_complexity 1 38 0 26 30 0 0 chr2 36156533 36156566 -217100017 + AT_rich Low_complexity Low_complexity 1 33 0 279 319 131 11 chr2 36157350 36157610 -217098973 - L1MC/D LINE L1 -2237 5548 5258 944 355 56 24 chr2 36157918 36158453 -217098130 - L3 LINE CR1 -298 1279 728 270 0 0 0 chr2 36158463 36158493 -217098090 + (TG)n Simple_repeat Simple_repeat 1 30 0 234 0 0 0 chr2 36158492 36158518 -217098065 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 22 56 0 0 chr2 36158661 36158697 -217097886 + AT_rich Low_complexity Low_complexity 1 36 0 2094 189 31 24 chr2 36159033 36159456 -217097127 - MSTB LTR MaLR 0 426 1 329 258 58 67 chr2 36160259 36160499 -217096084 + L1MEc LINE L1 1393 1630 -4766 1367 191 82 11 chr2 36160519 36160786 -217095797 + L1PA15 LINE L1 4 289 -6498 1331 197 27 7 chr2 36160811 36161105 -217095478 + L1PA15 LINE L1 2192 2491 -4306 15611 32 0 0 chr2 36161105 36163739 -217092844 - L1PA4 LINE L1 0 6155 3521 9458 44 3 0 chr2 36163740 36164942 -217091641 + L1PA4 LINE L1 2303 3508 -2638 * 16634 209 14 8 chr2 36164938 36168951 -217087632 + L1PA15 LINE L1 2476 6514 -302 240 0 0 0 chr2 36169147 36169174 -217087409 + L1P LINE L1 580 606 -5540 1504 219 53 29 chr2 36169857 36170313 -217086270 + MLT1C LTR MaLR 1 467 0 324 257 29 0 chr2 36170892 36170962 -217085621 + L2 LINE L2 3198 3269 -3 365 279 16 0 chr2 36171557 36171686 -217084897 - MER94 DNA DNA 0 134 4 398 303 103 17 chr2 36171999 36172233 -217084350 - MIR SINE MIR -4 258 5 22 0 0 0 chr2 36172424 36172446 -217084137 + AT_rich Low_complexity Low_complexity 1 22 0 41 0 0 0 chr2 36172510 36172551 -217084032 + AT_rich Low_complexity Low_complexity 1 41 0 36 82 0 0 chr2 36172618 36172703 -217083880 + AT_rich Low_complexity Low_complexity 1 85 0 2068 174 41 32 chr2 36173133 36173680 -217082903 + MLT2A2 LTR ERVL 1 554 0 183 271 29 29 chr2 36173866 36173936 -217082647 + L2 LINE L2 2580 2649 -665 827 221 23 0 chr2 36173949 36174121 -217082462 - MER58A DNA MER1_type -2 222 47 1228 143 18 6 chr2 36174435 36174697 -217081886 - Tigger4(Zombi) DNA MER2_type -84 2647 1 1938 277 26 9 chr2 36174711 36175404 -217081179 + L1MC/D LINE L1 2671 3375 -2771 553 311 0 12 chr2 36175420 36175581 -217081002 + MLT1C LTR MaLR 309 467 0 2863 216 60 20 chr2 36175592 36175656 -217080927 + L1MC/D LINE L1 4351 4411 -1930 2454 64 0 0 chr2 36175656 36175952 -217080631 + AluY SINE Alu 1 296 -15 2863 216 60 20 chr2 36175952 36177096 -217079487 + L1MC/D LINE L1 4411 5598 -743 2652 106 0 0 chr2 36177096 36177455 -217079128 - THE1B LTR MaLR -5 359 1 625 241 123 21 chr2 36179270 36179457 -217077126 + MIR SINE MIR 32 237 -25 184 400 38 0 chr2 36179712 36179817 -217076766 - MIR SINE MIR -102 160 52 290 113 0 19 chr2 36180859 36180912 -217075671 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 1659 190 17 0 chr2 36181348 36181637 -217074946 + MER49 LTR ERV1 1 294 -629 1351 221 85 12 chr2 36181672 36182003 -217074580 + MER4D LTR ERV1 549 903 0 23 0 0 0 chr2 36182276 36182299 -217074284 + AT_rich Low_complexity Low_complexity 1 23 0 6898 43 4 0 chr2 36182572 36183411 -217073172 - L1PA5 LINE L1 0 6154 5313 22 0 0 0 chr2 36183541 36183563 -217073020 + AT_rich Low_complexity Low_complexity 1 22 0 1791 134 29 4 chr2 36183572 36183847 -217072736 - AluSx SINE Alu -30 282 1 280 328 63 58 chr2 36184620 36184794 -217071789 + MER5B DNA MER1_type 1 175 -3 1377 146 218 32 chr2 36185209 36185517 -217071066 + L1PA8A LINE L1 5413 5777 -354 11109 233 26 18 chr2 36185537 36192007 -217064576 + L1MA9 LINE L1 3 5635 -1227 23 33 0 0 chr2 36192763 36192793 -217063790 + AT_rich Low_complexity Low_complexity 1 30 0 24 53 0 0 chr2 36193206 36193244 -217063339 + AT_rich Low_complexity Low_complexity 1 38 0 518 161 0 89 chr2 36193369 36193493 -217063090 - L1PA16 LINE L1 -3 6163 6051 183 261 67 101 chr2 36195796 36195915 -217060668 + L2 LINE L2 3187 3301 -12 308 222 14 0 chr2 36196590 36196662 -217059921 - THE1-int LTR MaLR -1013 567 495 21 36 0 0 chr2 36197356 36197384 -217059199 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 36197529 36197550 -217059033 + AT_rich Low_complexity Low_complexity 1 21 0 2196 190 39 2 chr2 36197684 36198095 -217058488 + MSTB LTR MaLR 1 426 0 817 278 65 51 chr2 36198179 36198611 -217057972 + L1MD2 LINE L1 5919 6356 -3 2392 190 73 2 chr2 36198664 36199170 -217057413 + L1MA9 LINE L1 6348 6889 -139 5488 218 2 0 chr2 36199171 36200322 -217056261 + L1P LINE L1 4051 5203 -943 399 304 137 60 chr2 36201005 36201558 -217055025 + L1MEc LINE L1 741 1336 -5060 472 257 78 69 chr2 36201561 36201880 -217054703 + L1M4 LINE L1 3478 3799 -2347 1250 299 89 20 chr2 36201945 36202972 -217053611 + L1M4 LINE L1 4164 5260 -886 331 338 5 28 chr2 36203118 36203331 -217053252 + L1M4 LINE L1 1470 1677 -4865 1533 323 65 40 chr2 36203367 36204107 -217052476 + L1MA6 LINE L1 11 768 -6021 * 11133 222 49 31 chr2 36204076 36204735 -217051848 + L1MA6 LINE L1 1129 1775 -5167 2025 114 35 7 chr2 36204735 36205024 -217051559 - AluSq SINE Alu -14 299 3 11133 222 49 31 chr2 36205024 36207229 -217049354 + L1MA6 LINE L1 1775 3939 -3003 1934 127 31 3 chr2 36207229 36207521 -217049062 + AluSx SINE Alu 1 300 -12 11133 222 49 31 chr2 36207521 36210676 -217045907 + L1MA6 LINE L1 3939 6942 0 227 333 29 29 chr2 36211821 36211992 -217044591 + L1ME2 LINE L1 27 197 -6226 455 293 62 36 chr2 36212520 36212824 -217043759 + L1ME2 LINE L1 1178 1489 -4934 253 344 23 0 chr2 36212989 36213120 -217043463 + L1ME2 LINE L1 1746 1879 -5064 685 291 38 40 chr2 36213144 36213564 -217043019 + L1ME2 LINE L1 2125 2543 -4579 343 251 86 34 chr2 36213558 36213733 -217042850 + L1ME2 LINE L1 5539 5722 -1219 * 253 137 0 20 chr2 36213753 36213804 -217042779 + LTR66 LTR ERVL 389 438 -172 230 254 152 35 chr2 36213833 36214030 -217042553 + L1ME2 LINE L1 5731 5950 -991 877 271 23 62 chr2 36214147 36214462 -217042121 + L1ME2 LINE L1 6153 6454 -505 475 212 36 15 chr2 36214597 36214734 -217041849 + L1ME2 LINE L1 6473 6612 -347 1821 116 0 4 chr2 36214744 36215021 -217041562 - L1P LINE L1 -1276 4870 4595 998 68 0 0 chr2 36215022 36215154 -217041429 + L1PA8 LINE L1 6041 6172 0 929 272 26 13 chr2 36215167 36215480 -217041103 + L1ME2 LINE L1 6632 6948 -11 302 398 79 11 chr2 36215578 36215857 -217040726 + L3 LINE CR1 1050 1347 -230 23 0 0 0 chr2 36215857 36215880 -217040703 + AT_rich Low_complexity Low_complexity 1 23 0 322 296 23 0 chr2 36216190 36216278 -217040305 + L1MC4 LINE L1 6614 6703 -1339 207 85 64 0 chr2 36216339 36216386 -217040197 + (TA)n Simple_repeat Simple_repeat 2 51 0 25 0 0 0 chr2 36216606 36216631 -217039952 + AT_rich Low_complexity Low_complexity 1 25 0 252 285 31 54 chr2 36217460 36217590 -217038993 + MLT1H LTR MaLR 406 532 -17 288 335 68 11 chr2 36218264 36218455 -217038128 - L2 LINE L2 -683 2631 2430 2061 223 20 17 chr2 36218622 36219206 -217037377 + L1P LINE L1 2810 3395 -2751 1831 133 0 4 chr2 36219634 36219898 -217036685 + AluSc SINE Alu 39 301 -8 1321 229 6 19 chr2 36220793 36221107 -217035476 - AluJb SINE Alu -2 310 1 225 147 88 29 chr2 36221192 36221260 -217035323 - L1MC4 LINE L1 0 8042 7971 363 137 0 0 chr2 36221316 36221389 -217035194 + (CA)n Simple_repeat Simple_repeat 1 73 0 1698 239 109 66 chr2 36221421 36222259 -217034324 - L1MC4 LINE L1 -146 7896 7023 2062 133 130 11 chr2 36222837 36223213 -217033370 + MSTA LTR MaLR 1 421 -7 180 152 0 0 chr2 36223558 36223591 -217032992 + T-rich Low_complexity Low_complexity 1 33 0 1959 217 85 79 chr2 36223936 36224757 -217031826 - LTR1B LTR ERV1 0 826 1 234 62 0 0 chr2 36226278 36226310 -217030273 + (TG)n Simple_repeat Simple_repeat 2 33 0 222 150 0 0 chr2 36226313 36226353 -217030230 + (GA)n Simple_repeat Simple_repeat 2 41 0 1607 178 3 11 chr2 36227373 36227660 -217028923 + AluJo SINE Alu 5 289 -23 450 0 0 0 chr2 36227750 36227800 -217028783 + (TA)n Simple_repeat Simple_repeat 1 50 0 660 152 9 0 chr2 36228508 36228613 -217027970 + THE1C LTR MaLR 270 375 0 5630 133 51 63 chr2 36228613 36229672 -217026911 + THE1C-int LTR MaLR 1 1046 -534 3700 120 9 2 chr2 36230059 36230600 -217025983 + THE1C-int LTR MaLR 1036 1580 0 470 160 53 114 chr2 36230600 36230731 -217025852 + THE1C LTR MaLR 1 123 -252 714 142 8 17 chr2 36230751 36230871 -217025712 + THE1C LTR MaLR 256 374 -1 23 54 0 0 chr2 36233189 36233226 -217023357 + AT_rich Low_complexity Low_complexity 1 37 0 321 325 114 23 chr2 36233309 36233339 -217023244 - MIR SINE MIR -18 244 218 547 113 0 0 chr2 36233339 36233419 -217023164 + MADE1 DNA Mariner 1 80 0 321 325 114 23 chr2 36233419 36233603 -217022980 - MIR SINE MIR -44 218 16 918 201 13 27 chr2 36233615 36233839 -217022744 + L1PB4 LINE L1 5929 6149 -7 1171 149 13 53 chr2 36233949 36234177 -217022406 - THE1C LTR MaLR 0 375 157 2729 283 65 33 chr2 36234179 36236435 -217020148 - L1MEc LINE L1 -2123 4092 1628 2222 128 3 3 chr2 36236463 36236814 -217019769 - L1PA13 LINE L1 -19 6144 5794 347 213 16 10 chr2 36237067 36237079 -217019504 + MER74A LTR ERVL 267 277 -345 2029 95 49 0 chr2 36237079 36237363 -217019220 - AluY SINE Alu -13 298 1 347 213 16 10 chr2 36237363 36237449 -217019134 + MER74A LTR ERVL 277 426 -196 1085 255 117 57 chr2 36237570 36238781 -217017802 - L1MEc LINE L1 -3685 2879 1656 423 343 40 28 chr2 36238782 36239106 -217017477 - L1MEc LINE L1 -5144 901 574 683 300 84 37 chr2 36239653 36239950 -217016633 - L2 LINE L2 -2 3311 3001 188 375 135 0 chr2 36240446 36240542 -217016041 + L2 LINE L2 3156 3264 -8 243 0 0 0 chr2 36240697 36240724 -217015859 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 5104 30 0 0 chr2 36240725 36241327 -217015256 - L1PA3 LINE L1 0 6155 5554 2462 19 1 0 chr2 36241330 36241730 -217014853 + L1PA3 LINE L1 5155 5555 -600 421 249 154 30 chr2 36243516 36243685 -217012898 + MIR SINE MIR 72 261 -1 258 32 0 0 chr2 36243768 36243799 -217012784 + (CA)n Simple_repeat Simple_repeat 2 32 0 804 187 42 8 chr2 36244938 36245124 -217011459 + MER61D LTR ERV1 259 434 0 25 0 0 0 chr2 36245722 36245747 -217010836 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36245999 36246024 -217010559 + AT_rich Low_complexity Low_complexity 1 25 0 1077 217 57 102 chr2 36246244 36246994 -217009589 - LTR8A LTR ERV1 -34 693 1 313 303 45 11 chr2 36248653 36248742 -217007841 + L2 LINE L2 3169 3260 -12 464 139 13 0 chr2 36250024 36250103 -217006480 + MADE1 DNA Mariner 1 80 0 243 225 14 28 chr2 36250444 36250515 -217006068 + CT-rich Low_complexity Low_complexity 2 71 0 204 362 65 43 chr2 36251077 36251309 -217005274 + L2 LINE L2 2182 2418 -896 186 43 0 0 chr2 36251320 36251343 -217005240 + (T)n Simple_repeat Simple_repeat 1 23 0 4635 128 4 15 chr2 36251541 36252293 -217004290 + L1PA13 LINE L1 5417 6160 -3 517 183 0 9 chr2 36252296 36252409 -217004174 + L1MA4 LINE L1 6068 6170 -121 252 164 0 0 chr2 36252393 36252448 -217004135 + L1MA4A LINE L1 6244 6298 -5 * 197 253 189 21 chr2 36252710 36252805 -217003778 - MIR SINE MIR -150 112 2 270 367 36 0 chr2 36253564 36253703 -217002880 + MIR SINE MIR 63 206 -56 616 237 35 40 chr2 36254102 36254275 -217002308 - MER20 DNA MER1_type -5 214 43 295 89 36 0 chr2 36254994 36255050 -217001533 + CT-rich Low_complexity Low_complexity 2 59 0 590 333 59 26 chr2 36255144 36255414 -217001169 + L3 LINE CR1 788 1066 -511 338 327 14 23 chr2 36256071 36256285 -217000298 - L1M4 LINE L1 -3358 2788 2577 2082 176 59 5 chr2 36256704 36257108 -216999475 + MSTB LTR MaLR 1 426 0 285 109 0 0 chr2 36257451 36257497 -216999086 + (CA)n Simple_repeat Simple_repeat 2 47 0 480 312 62 10 chr2 36257775 36258083 -216998500 + L1MCc LINE L1 1165 1488 -4935 291 300 28 9 chr2 36358439 36358565 -216898018 + GA-rich Low_complexity Low_complexity 2 220 0 196 333 26 87 chr2 36359274 36359469 -216897114 + MIR3 SINE MIR 16 198 -10 198 0 0 0 chr2 36360278 36360300 -216896283 + (A)n Simple_repeat Simple_repeat 1 22 0 1824 76 4 12 chr2 36360487 36360737 -216895846 - L1PA7 LINE L1 -1 6153 5906 2472 77 0 10 chr2 36362162 36362474 -216894109 + AluSc SINE Alu 1 309 0 24 0 0 0 chr2 36362585 36362609 -216893974 + AT_rich Low_complexity Low_complexity 1 24 0 204 40 0 0 chr2 36363258 36363283 -216893300 + (CA)n Simple_repeat Simple_repeat 2 26 0 2440 82 0 0 chr2 36363878 36364183 -216892400 + AluY SINE Alu 1 305 -6 223 304 43 54 chr2 36364639 36364731 -216891852 - L2 LINE L2 -27 3286 3196 3190 177 38 11 chr2 36367060 36367687 -216888896 - LTR48B LTR ERV1 0 644 1 184 290 10 80 chr2 36367778 36367878 -216888705 - MIR SINE MIR -50 212 120 1858 108 0 8 chr2 36368414 36368673 -216887910 + AluSq SINE Alu 57 313 0 792 184 87 94 chr2 36369122 36369618 -216886965 - L1MC3 LINE L1 -9 7776 7278 2389 83 0 10 chr2 36369618 36369930 -216886653 - AluSc SINE Alu 0 309 1 240 246 0 0 chr2 36369930 36369987 -216886596 - MLT1F1 LTR MaLR -476 91 35 792 184 87 94 chr2 36369987 36370327 -216886256 - L1MC3 LINE L1 -505 7280 6762 491 317 56 6 chr2 36370328 36370508 -216886075 + MIR SINE MIR 23 211 -51 269 151 19 0 chr2 36370734 36370787 -216885796 + (CA)n Simple_repeat Simple_repeat 2 55 0 239 340 0 11 chr2 36371537 36371631 -216884952 + T-rich Low_complexity Low_complexity 4 96 0 23 0 0 0 chr2 36372033 36372056 -216884527 + AT_rich Low_complexity Low_complexity 1 23 0 2140 111 3 10 chr2 36372174 36372472 -216884111 + AluSq SINE Alu 1 296 -17 6326 30 19 0 chr2 36372877 36373622 -216882961 - L1PA3 LINE L1 0 6155 5397 5101 24 2 2 chr2 36373617 36374242 -216882341 + L1PA3 LINE L1 4770 5394 -752 * 696 284 121 26 chr2 36374259 36374572 -216882011 - MLT1J LTR MaLR -166 345 3 241 254 14 14 chr2 36375004 36375068 -216881515 + CT-rich Low_complexity Low_complexity 2 68 -4 207 0 0 0 chr2 36375068 36375091 -216881492 + (CA)n Simple_repeat Simple_repeat 1 23 0 288 310 177 0 chr2 36375941 36376099 -216880484 - LTR16A1 LTR ERVL -6 451 266 532 341 75 42 chr2 36376202 36376803 -216879780 - HERVL LTR ERVL -3553 2101 1481 444 324 59 13 chr2 36376822 36377060 -216879523 - HERVL LTR ERVL -3642 1354 1106 189 74 0 0 chr2 36378560 36378587 -216877996 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 2037 156 47 3 chr2 36379142 36379507 -216877076 + L1PB4 LINE L1 5764 6144 -12 196 241 19 74 chr2 36379517 36379571 -216877012 - L2 LINE L2 -74 3239 3189 706 224 58 5 chr2 36380606 36380811 -216875772 + L1ME2 LINE L1 5687 5902 -262 1437 181 25 25 chr2 36380811 36381093 -216875490 + Tigger3b DNA MER2_type 1 282 -949 2425 133 77 12 chr2 36381095 36381500 -216875083 - MSTB1 LTR MaLR 0 432 2 1148 153 31 0 chr2 36381505 36381701 -216874882 + Tigger3b DNA MER2_type 279 480 -751 2127 120 7 3 chr2 36381757 36382057 -216874526 - AluSx SINE Alu -11 301 1 6739 56 20 0 chr2 36382299 36383225 -216873358 - L1PA6 LINE L1 -3 6151 5203 337 302 39 123 chr2 36383594 36384001 -216872582 + L2 LINE L2 2941 3313 0 254 95 24 0 chr2 36384284 36384326 -216872257 + (TA)n Simple_repeat Simple_repeat 2 44 0 321 321 36 9 chr2 36384690 36384802 -216871781 + HAL1b LINE L1 561 675 -673 2179 60 0 4 chr2 36385317 36385583 -216871000 + AluY SINE Alu 35 299 -12 309 340 43 21 chr2 36385891 36386079 -216870504 + MIR SINE MIR 53 244 -18 267 218 69 30 chr2 36386099 36386200 -216870383 + L1ME LINE L1 5778 5882 -239 407 280 198 37 chr2 36387672 36387915 -216868668 + L2 LINE L2 2574 2855 -459 406 324 175 16 chr2 36387968 36388277 -216868306 + L2 LINE L2 2956 3313 0 477 331 22 7 chr2 36389234 36389503 -216867080 - L1M4 LINE L1 -968 5178 4906 310 286 12 0 chr2 36390031 36390115 -216866468 + (TA)n Simple_repeat Simple_repeat 1 85 0 247 157 20 0 chr2 36390116 36390167 -216866416 - L1MEc LINE L1 -4315 1995 1944 353 274 43 70 chr2 36390404 36390556 -216866027 - L1MEc LINE L1 -4553 1576 1421 453 36 0 0 chr2 36390556 36390611 -216865972 + (TG)n Simple_repeat Simple_repeat 1 55 0 180 0 0 0 chr2 36390610 36390630 -216865953 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 353 274 43 70 chr2 36390611 36390850 -216865733 - L1MEc LINE L1 -4708 1421 1214 409 288 83 72 chr2 36390866 36391399 -216865184 - L1MEc LINE L1 -4918 1207 704 251 376 10 0 chr2 36391443 36391544 -216865039 - L1MEc LINE L1 -5482 637 536 614 272 0 0 chr2 36392547 36392683 -216863900 + MIR SINE MIR 39 174 -88 261 282 129 0 chr2 36392765 36392850 -216863733 - MIR SINE MIR -108 154 59 2078 116 7 0 chr2 36393104 36393388 -216863195 - AluSp SINE Alu -25 288 3 2180 116 0 0 chr2 36393688 36393981 -216862602 - AluSq SINE Alu -20 293 1 600 273 44 34 chr2 36394675 36394880 -216861703 + MER63A DNA MER1_type 4 210 0 372 253 116 47 chr2 36395056 36395246 -216861337 - L2 LINE L2 -2 3311 3109 430 262 86 64 chr2 36396740 36397053 -216859530 + L1M4 LINE L1 3175 3494 -2652 929 258 73 21 chr2 36397203 36397629 -216858954 + L1M4 LINE L1 3535 3982 -2164 2760 66 0 8 chr2 36397675 36398038 -216858545 + L1PA13 LINE L1 5785 6144 -19 1782 169 0 10 chr2 36398115 36398405 -216858178 + AluJo SINE Alu 1 287 -25 244 47 23 23 chr2 36398415 36398458 -216858125 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 207 0 0 0 chr2 36398727 36398750 -216857833 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 667 288 25 10 chr2 36399009 36399207 -216857376 + MIR SINE MIR 59 259 -3 2403 66 0 10 chr2 36399883 36400185 -216856398 + AluY SINE Alu 1 299 -12 2272 145 28 14 chr2 36402912 36403271 -216853312 + THE1B LTR MaLR 1 364 0 442 308 31 36 chr2 36403405 36403600 -216852983 - MIR SINE MIR -55 207 14 217 0 29 29 chr2 36403641 36403675 -216852908 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1360 194 51 11 chr2 36403862 36404212 -216852371 - MER69 DNA AcHobo -2 2524 2161 315 0 0 0 chr2 36404654 36404689 -216851894 + (CA)n Simple_repeat Simple_repeat 2 36 0 226 208 19 38 chr2 36404707 36404760 -216851823 - L2 LINE L2 -26 3287 3236 2115 117 0 0 chr2 36405137 36405451 -216851132 - AluSx SINE Alu 0 314 1 286 360 94 23 chr2 36406394 36406874 -216849709 + L2 LINE L2 1992 2505 -809 200 167 0 0 chr2 36407554 36407584 -216848999 + polypurine Low_complexity Low_complexity 2 31 0 276 343 12 47 chr2 36407585 36407757 -216848826 + MIR SINE MIR 41 206 -56 711 247 18 12 chr2 36408301 36408471 -216848112 + MIR SINE MIR 35 205 -57 226 370 52 32 chr2 36408525 36408679 -216847904 + L2 LINE L2 3112 3268 -4 257 364 83 8 chr2 36409554 36409675 -216846908 + L2 LINE L2 3143 3272 0 269 361 30 6 chr2 36409908 36410077 -216846506 + L1MEc LINE L1 619 791 -6034 293 293 71 11 chr2 36410699 36410938 -216845645 + L1MEc LINE L1 1489 1887 -4832 369 306 19 13 chr2 36410994 36411151 -216845432 + L1MEc LINE L1 2028 2185 -4640 432 237 61 15 chr2 36411215 36411346 -216845237 - L1MC2 LINE L1 -27 6317 6181 * 2497 232 77 28 chr2 36411342 36412443 -216844140 - L1MCb LINE L1 -4851 1194 338 564 178 0 45 chr2 36412500 36412634 -216843949 - L1M2 LINE L1 -655 5507 5381 936 247 47 30 chr2 36412635 36412935 -216843648 - L1MCb LINE L1 -5740 305 1 1353 253 72 36 chr2 36412954 36413862 -216842721 + L1ME LINE L1 4848 5794 -370 * 5017 229 28 20 chr2 36413847 36414672 -216841911 + L1PA15-16 LINE L1 2729 3546 -3303 1789 167 7 0 chr2 36414672 36414995 -216841588 - AluJb SINE Alu 0 329 5 5017 229 28 20 chr2 36414995 36415843 -216840740 + L1PA15-16 LINE L1 3546 4422 -2427 928 205 0 0 chr2 36415843 36416014 -216840569 - MER1B DNA MER1_type -126 171 1 544 332 57 34 chr2 36416036 36416497 -216840086 - L2 LINE L2 -129 3184 2712 12040 215 21 13 chr2 36417188 36420410 -216836173 - L1 LINE L1 -1303 4843 1613 3101 211 78 6 chr2 36420431 36422051 -216834532 - L1PBa LINE L1 -4867 1996 115 729 203 7 0 chr2 36422171 36422314 -216834269 - L1P LINE L1 -1490 4656 4513 930 121 0 61 chr2 36422316 36422481 -216834102 + MER1B DNA MER1_type 185 339 0 510 295 34 29 chr2 36422560 36422767 -216833816 + MIR SINE MIR 49 256 -6 339 270 78 17 chr2 36424030 36424145 -216832438 - L2 LINE L2 -2 3311 3190 451 245 0 0 chr2 36424488 36424582 -216832001 - Charlie1 DNA MER1_type -2 2759 2666 2108 133 0 3 chr2 36424588 36424896 -216831687 - AluSx SINE Alu -5 307 1 2358 82 0 0 chr2 36425049 36425340 -216831243 - AluY SINE Alu -20 291 1 781 170 17 37 chr2 36425365 36425538 -216831045 - MLT1A1 LTR MaLR 0 396 199 21 89 0 0 chr2 36427246 36427302 -216829281 + AT_rich Low_complexity Low_complexity 1 56 0 256 313 26 9 chr2 36427610 36427725 -216828858 + L2 LINE L2 2154 2270 -1044 248 391 62 6 chr2 36427758 36427937 -216828646 - MIR3 SINE MIR 0 208 20 21 0 0 0 chr2 36428914 36428935 -216827648 + AT_rich Low_complexity Low_complexity 1 21 0 618 123 35 0 chr2 36428935 36429106 -216827477 + (TA)n Simple_repeat Simple_repeat 1 177 0 36 0 0 0 chr2 36429106 36429142 -216827441 + AT_rich Low_complexity Low_complexity 1 36 0 512 267 153 20 chr2 36429423 36429573 -216827010 - MER5A DNA MER1_type -6 183 14 194 284 95 14 chr2 36429687 36429761 -216826822 + MIR SINE MIR 74 153 -109 369 232 5 187 chr2 36429982 36430059 -216826524 - MER5B DNA MER1_type 0 178 156 2229 82 0 4 chr2 36430059 36430367 -216826216 + AluSc SINE Alu 1 307 0 369 232 5 187 chr2 36430367 36430486 -216826097 - MER5B DNA MER1_type -22 156 17 184 221 59 59 chr2 36430675 36430743 -216825840 + MIR SINE MIR 145 212 -50 21 0 0 0 chr2 36431101 36431122 -216825461 + AT_rich Low_complexity Low_complexity 1 21 0 344 190 13 0 chr2 36431800 36431879 -216824704 + (TA)n Simple_repeat Simple_repeat 2 81 0 348 24 0 0 chr2 36431879 36431920 -216824663 + (GA)n Simple_repeat Simple_repeat 2 42 0 265 389 36 67 chr2 36432274 36432808 -216823775 + L2 LINE L2 2758 3272 0 665 258 65 24 chr2 36433093 36433341 -216823242 + L1M4 LINE L1 9 266 -6276 1547 219 61 73 chr2 36433584 36434156 -216822427 + L1M4 LINE L1 624 1188 -5354 522 349 60 13 chr2 36434553 36434785 -216821798 - MIR SINE MIR -13 249 7 2985 209 27 2 chr2 36437106 36437691 -216818892 + MER77 LTR ERV1 3 602 -3 23 54 0 0 chr2 36437934 36437971 -216818612 + AT_rich Low_complexity Low_complexity 1 37 0 2244 122 0 0 chr2 36439264 36439567 -216817016 - AluJb SINE Alu -9 303 1 210 218 177 65 chr2 36439571 36439695 -216816888 + L2 LINE L2 3174 3311 -2 372 138 0 0 chr2 36439732 36439797 -216816786 + (TG)n Simple_repeat Simple_repeat 2 66 0 218 181 24 121 chr2 36440886 36440969 -216815614 + MIR3 SINE MIR 2 76 -132 1732 171 68 3 chr2 36441023 36441345 -216815238 + MER2 DNA MER2_type 2 344 0 392 244 146 0 chr2 36441646 36441769 -216814814 - MIR SINE MIR -71 191 51 1049 171 65 28 chr2 36441791 36442008 -216814575 - AluJo SINE Alu -1 311 87 273 221 0 0 chr2 36443426 36443494 -216813089 + (TA)n Simple_repeat Simple_repeat 1 68 0 24 0 0 0 chr2 36443634 36443658 -216812925 + AT_rich Low_complexity Low_complexity 1 24 0 393 249 249 0 chr2 36443854 36444027 -216812556 - MIR SINE MIR 0 262 47 1989 213 77 22 chr2 36444272 36444364 -216812219 + MER45B DNA AcHobo 1 86 -954 2310 117 20 6 chr2 36444364 36444714 -216811869 - THE1A LTR MaLR 0 355 1 11860 87 6 2 chr2 36444714 36446288 -216810295 - THE1A-int LTR MaLR 0 1580 1 2217 117 14 25 chr2 36446288 36446647 -216809936 - THE1A LTR MaLR 0 355 1 1989 213 77 22 chr2 36446647 36446862 -216809721 + MER45B DNA AcHobo 86 288 -752 1924 182 40 0 chr2 36446862 36447213 -216809370 + MLT1A1 LTR MaLR 1 365 0 1989 213 77 22 chr2 36447213 36447656 -216808927 + MER45B DNA AcHobo 288 856 -184 644 156 94 99 chr2 36447755 36447947 -216808636 + MER45B DNA AcHobo 848 1038 -2 473 333 52 10 chr2 36448867 36449176 -216807407 + HAL1 LINE L1 1413 1734 -773 235 229 0 62 chr2 36449821 36449917 -216806666 + L1MC4a LINE L1 3855 3944 -2202 21 0 0 0 chr2 36450078 36450099 -216806484 + AT_rich Low_complexity Low_complexity 1 21 0 247 263 45 0 chr2 36450152 36450285 -216806298 + (TA)n Simple_repeat Simple_repeat 1 139 0 668 324 68 22 chr2 36450536 36451020 -216805563 + L1MC4a LINE L1 5329 5842 -1966 1463 258 94 43 chr2 36451020 36451583 -216805000 - MLT1G1 LTR MaLR 0 595 4 668 324 68 22 chr2 36451583 36451638 -216804945 + L1MC4a LINE L1 5842 5893 -1915 779 191 0 0 chr2 36451647 36451783 -216804800 + FRAM SINE Alu 24 159 -17 322 250 105 40 chr2 36452355 36452479 -216804104 - MIR SINE MIR -3 259 128 326 306 106 12 chr2 36452653 36452813 -216803770 - MIR3 SINE MIR -25 183 9 255 31 0 0 chr2 36453492 36453524 -216803059 + (TG)n Simple_repeat Simple_repeat 2 33 0 303 334 53 3 chr2 36454335 36454468 -216802115 + MIR SINE MIR 20 156 -52 1891 179 47 34 chr2 36454656 36455065 -216801518 - MLT2D LTR ERVL 0 414 1 244 325 198 6 chr2 36456121 36456278 -216800305 + MIR SINE MIR 12 198 -64 186 347 40 0 chr2 36456342 36456417 -216800166 - L2 LINE L2 -9 3263 3186 507 309 144 27 chr2 36456445 36456701 -216799882 + MLT1J LTR MaLR 26 311 -200 253 293 98 8 chr2 36456782 36456915 -216799668 - LTR16A1 LTR ERVL -221 236 92 2361 302 107 21 chr2 36457170 36457560 -216799023 + L2 LINE L2 1790 2145 -1168 884 209 67 24 chr2 36457560 36457770 -216798813 - MER20 DNA MER1_type 0 219 1 2361 302 107 21 chr2 36457770 36458582 -216798001 + L2 LINE L2 2145 3123 -190 2034 121 16 38 chr2 36458582 36458896 -216797687 + AluSx SINE Alu 1 307 -5 2361 302 107 21 chr2 36458896 36459106 -216797477 + L2 LINE L2 3123 3313 0 793 267 40 21 chr2 36459217 36459524 -216797059 - MLT1A2 LTR MaLR -4 377 1 286 253 182 0 chr2 36459525 36459624 -216796959 - MIR SINE MIR -100 162 46 236 263 40 0 chr2 36460396 36460472 -216796111 + (TATATG)n Simple_repeat Simple_repeat 4 82 0 258 157 78 0 chr2 36460473 36460524 -216796059 - L2 LINE L2 -68 3245 3191 450 308 184 31 chr2 36460933 36461230 -216795353 - L2 LINE L2 -37 3276 2895 4783 51 2 0 chr2 36461230 36461821 -216794762 - L1PA7 LINE L1 -2 6152 5561 450 308 184 31 chr2 36461821 36461946 -216794637 - L2 LINE L2 -418 2895 2791 21 36 0 0 chr2 36461988 36462016 -216794567 + AT_rich Low_complexity Low_complexity 1 28 0 215 260 0 0 chr2 36463300 36463350 -216793233 + (TA)n Simple_repeat Simple_repeat 1 50 0 4044 223 60 16 chr2 36463372 36464246 -216792337 - MER45B DNA AcHobo -541 1040 115 2171 104 0 13 chr2 36464246 36464545 -216792038 + AluSg1 SINE Alu 1 295 -14 4044 223 60 16 chr2 36464545 36464663 -216791920 - MER45B DNA AcHobo -1466 115 4 527 296 82 19 chr2 36464665 36464871 -216791712 - MIR SINE MIR -35 227 9 1443 67 0 0 chr2 36465075 36465254 -216791329 - L1PA7 LINE L1 -13 6141 5963 482 333 40 17 chr2 36465276 36465450 -216791133 - MIR SINE MIR -83 179 2 243 336 114 7 chr2 36466537 36466686 -216789897 - LTR16C LTR ERVL 0 491 327 354 45 0 0 chr2 36466834 36466878 -216789705 + (CA)n Simple_repeat Simple_repeat 2 45 0 26 30 0 0 chr2 36468054 36468087 -216788496 + AT_rich Low_complexity Low_complexity 1 33 0 253 246 0 0 chr2 36468411 36468468 -216788115 + (TA)n Simple_repeat Simple_repeat 1 57 0 270 312 123 28 chr2 36468589 36468906 -216787677 - L1ME LINE L1 -435 5729 5383 428 323 104 30 chr2 36468919 36469322 -216787261 - L1ME LINE L1 -783 5363 4931 1674 196 50 3 chr2 36469412 36469790 -216786793 - L1MA8 LINE L1 -1 6290 5895 744 285 169 56 chr2 36470246 36470712 -216785871 + MLT2E LTR ERVL 10 528 -100 15214 167 27 18 chr2 36470943 36471862 -216784721 - L1PA13 LINE L1 0 6814 5904 5360 151 34 35 chr2 36471862 36472934 -216783649 + MER11C LTR ERVK 1 1071 0 15214 167 27 18 chr2 36472934 36475680 -216780903 - L1PA13 LINE L1 -910 5904 3123 357 109 0 0 chr2 36475680 36475735 -216780848 + (TG)n Simple_repeat Simple_repeat 2 56 0 15214 167 27 18 chr2 36475735 36475958 -216780625 - L1PA13 LINE L1 -3691 3123 2903 3846 207 45 17 chr2 36475958 36476902 -216779681 - L1PA13 LINE L1 -5778 1009 1 217 131 66 49 chr2 36476933 36476994 -216779589 + T-rich Low_complexity Low_complexity 1 62 0 649 270 38 6 chr2 36477289 36477448 -216779135 + MER45A DNA AcHobo 15 178 0 307 322 147 17 chr2 36478273 36478450 -216778133 - MIR SINE MIR -10 252 53 5060 127 21 4 chr2 36478613 36479403 -216777180 + L1PA15 LINE L1 5354 6157 -8 904 284 120 40 chr2 36479455 36479930 -216776653 - LTR33A LTR ERVL 0 523 11 183 376 24 0 chr2 36480740 36480825 -216775758 + MER5B DNA MER1_type 88 174 -4 194 382 0 0 chr2 36481136 36481212 -216775371 - L3 LINE CR1 -1314 263 188 2138 149 92 20 chr2 36481557 36481960 -216774623 - MSTB1 LTR MaLR 0 432 1 22 0 0 0 chr2 36482256 36482278 -216774305 + AT_rich Low_complexity Low_complexity 1 22 0 223 263 36 57 chr2 36482664 36482766 -216773817 + MIR SINE MIR 19 117 -91 235 333 75 17 chr2 36482888 36483008 -216773575 - L2 LINE L2 -3 3269 3143 8407 123 12 8 chr2 36483451 36483664 -216772919 - HSMAR2 DNA Mariner -1 1301 1090 2500 105 28 22 chr2 36483664 36484026 -216772557 - THE1B LTR MaLR 0 364 1 8407 123 12 8 chr2 36484026 36485107 -216771476 - HSMAR2 DNA Mariner -212 1090 2 243 0 0 0 chr2 36485582 36485609 -216770974 + (A)n Simple_repeat Simple_repeat 1 27 0 639 282 64 46 chr2 36485791 36486071 -216770512 - LTR16A1 LTR ERVL -5 452 168 180 152 0 0 chr2 36486115 36486148 -216770435 + CT-rich Low_complexity Low_complexity 2 34 0 388 332 53 29 chr2 36486424 36486668 -216769915 + MLT1K LTR MaLR 322 571 -17 207 214 0 0 chr2 36487204 36487246 -216769337 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 1623 176 7 10 chr2 36487254 36487544 -216769039 - AluJo SINE Alu -23 289 1 286 261 163 22 chr2 36487544 36487636 -216768947 - L2 LINE L2 -7 3306 3202 180 111 0 0 chr2 36487642 36487669 -216768914 + (TTCTCC)n Simple_repeat Simple_repeat 1 27 0 872 113 10 113 chr2 36487886 36488089 -216768494 + L1MA9 LINE L1 6131 6312 0 2242 271 28 40 chr2 36488218 36488986 -216767597 - L1ME LINE L1 -5212 858 99 1973 149 10 3 chr2 36488986 36489281 -216767302 - AluSx SINE Alu -15 297 1 2242 271 28 40 chr2 36489281 36489347 -216767236 - L1ME LINE L1 -5971 99 34 413 258 48 16 chr2 36490945 36491069 -216765514 + L2 LINE L2 3186 3313 0 1668 237 104 16 chr2 36491874 36493065 -216763518 + L1MC4 LINE L1 6463 7909 -133 206 173 0 19 chr2 36493331 36493383 -216763200 + (TA)n Simple_repeat Simple_repeat 1 51 0 302 213 40 0 chr2 36493617 36493692 -216762891 + MLT1J2 LTR MaLR 1 78 -372 295 327 80 6 chr2 36493690 36493852 -216762731 + MLT1J1 LTR MaLR 273 446 0 * 1887 181 56 42 chr2 36494793 36494826 -216761757 + MER47B DNA MER2_type 1 32 -2291 188 67 33 0 chr2 36494826 36494856 -216761727 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1887 181 56 42 chr2 36494856 36495231 -216761352 + MER47B DNA MER2_type 32 415 -3 392 300 106 44 chr2 36495425 36495652 -216760931 - MIR SINE MIR -13 249 9 1926 61 0 8 chr2 36496440 36496686 -216759897 + AluY SINE Alu 56 299 -12 1628 194 22 3 chr2 36498018 36498373 -216758210 - L1MA5 LINE L1 0 6300 5939 4560 53 9 0 chr2 36498387 36498955 -216757628 - L1PA7 LINE L1 -21 6133 5561 3007 78 22 0 chr2 36499025 36499590 -216756993 - L1P3 LINE L1 -483 5671 5099 * 3616 105 2 2 chr2 36499588 36500113 -216756470 + L1P3 LINE L1 4582 5106 -1040 13721 148 24 12 chr2 36500258 36502587 -216753996 - Tigger1 DNA MER2_type -1 2417 57 1839 162 0 3 chr2 36502587 36502889 -216753694 + AluSx SINE Alu 1 301 -11 13721 148 24 12 chr2 36502889 36502947 -216753636 - Tigger1 DNA MER2_type -2361 57 1 192 182 45 0 chr2 36503557 36503601 -216752982 + L2 LINE L2 2936 2981 -291 238 310 115 0 chr2 36503803 36503890 -216752693 + L2 LINE L2 3122 3218 -54 488 214 61 0 chr2 36504036 36504134 -216752449 - MER5A DNA MER1_type 0 189 86 872 184 69 0 chr2 36504139 36504313 -216752270 + MER5A DNA MER1_type 1 186 -3 2134 234 17 35 chr2 36505323 36505866 -216750717 + LTR31 LTR ERV1 75 607 -12 198 268 18 36 chr2 36505871 36505927 -216750656 + MIR SINE MIR 7 61 -201 496 113 0 25 chr2 36507416 36507496 -216749087 + L1MC1 LINE L1 6251 6328 -5 213 213 0 0 chr2 36507496 36507543 -216749040 + (TA)n Simple_repeat Simple_repeat 2 48 0 260 238 12 0 chr2 36507590 36507674 -216748909 + (TATATG)n Simple_repeat Simple_repeat 4 88 0 1237 188 19 13 chr2 36508677 36508992 -216747591 + MER33 DNA MER1_type 1 288 -36 1330 154 126 14 chr2 36508998 36509291 -216747292 - MER44D DNA MER2_type -13 596 1 1537 158 33 0 chr2 36509377 36509649 -216746934 + L1PA16 LINE L1 5864 6144 -22 2425 108 44 8 chr2 36509889 36510251 -216746332 + THE1C LTR MaLR 1 375 0 9546 118 53 4 chr2 36510251 36511757 -216744826 + THE1C-int LTR MaLR 1 1580 0 2246 124 59 0 chr2 36511757 36512111 -216744472 + THE1C LTR MaLR 1 375 0 27 0 0 0 chr2 36512983 36513010 -216743573 + AT_rich Low_complexity Low_complexity 1 27 0 1555 176 45 21 chr2 36514090 36514159 -216742424 - L1MA7 LINE L1 0 6291 6225 315 49 0 0 chr2 36514159 36514200 -216742383 + (CA)n Simple_repeat Simple_repeat 2 42 0 1555 176 45 21 chr2 36514200 36514504 -216742079 - L1MA7 LINE L1 -66 6225 5909 1760 156 16 9 chr2 36514504 36514824 -216741759 + L1MA7 LINE L1 5580 5901 -390 299 250 115 48 chr2 36516911 36517015 -216739568 - MIR3 SINE MIR -10 198 88 497 307 35 25 chr2 36517170 36517372 -216739211 + MIR SINE MIR 25 228 -34 1333 212 106 44 chr2 36517588 36517927 -216738656 - MLT1A1 LTR MaLR 0 365 6 21 57 0 0 chr2 36517964 36517999 -216738584 + AT_rich Low_complexity Low_complexity 1 35 0 1860 102 4 0 chr2 36518526 36518800 -216737783 + L1MA2 LINE L1 6022 6296 -8 28 0 0 0 chr2 36518807 36518835 -216737748 + AT_rich Low_complexity Low_complexity 1 28 0 2273 91 0 11 chr2 36518838 36519166 -216737417 + AluY SINE Alu 2 326 0 344 103 17 0 chr2 36519695 36519753 -216736830 + (GA)n Simple_repeat Simple_repeat 2 60 0 21 57 0 0 chr2 36520214 36520249 -216736334 + AT_rich Low_complexity Low_complexity 1 35 0 1641 170 40 34 chr2 36520739 36521092 -216735491 + MLT1A1 LTR MaLR 1 355 -10 262 196 0 0 chr2 36521140 36521186 -216735397 - MER58 DNA MER1_type -4 2416 2371 286 340 31 53 chr2 36521527 36521845 -216734738 + MER102b DNA MER1_type 15 325 -16 378 0 0 0 chr2 36522386 36522428 -216734155 + (TG)n Simple_repeat Simple_repeat 1 42 0 30 0 0 0 chr2 36522841 36522871 -216733712 + AT_rich Low_complexity Low_complexity 1 30 0 2032 71 0 8 chr2 36523474 36523728 -216732855 + AluY SINE Alu 44 295 -16 184 422 20 35 chr2 36524130 36524329 -216732254 - L2 LINE L2 -208 3064 2869 224 303 90 49 chr2 36524378 36524500 -216732083 - L2 LINE L2 -504 2810 2684 1705 148 34 0 chr2 36525479 36525742 -216730841 + AluSq SINE Alu 41 312 -1 21 82 0 0 chr2 36525978 36526027 -216730556 + AT_rich Low_complexity Low_complexity 1 49 0 1313 251 18 6 chr2 36526169 36526495 -216730088 - L1ME LINE L1 -5473 597 268 255 366 146 8 chr2 36526495 36526741 -216729842 - L3 LINE CR1 -384 1193 914 573 300 126 14 chr2 36526921 36527198 -216729385 - L2 LINE L2 0 3313 3006 285 303 155 0 chr2 36527204 36527359 -216729224 - L3 LINE CR1 -802 775 597 500 204 0 44 chr2 36527365 36527478 -216729105 - FAM SINE Alu -17 168 61 1278 109 0 11 chr2 36527802 36527976 -216728607 + AluSq SINE Alu 1 172 -141 * 1430 137 0 19 chr2 36527975 36528187 -216728396 + AluSg/x SINE Alu 82 289 -23 23 0 0 0 chr2 36528187 36528210 -216728373 + AT_rich Low_complexity Low_complexity 1 23 0 199 328 78 17 chr2 36528210 36528326 -216728257 + L2 LINE L2 3150 3272 0 21 0 0 0 chr2 36529086 36529107 -216727476 + AT_rich Low_complexity Low_complexity 1 21 0 24 85 0 0 chr2 36529784 36529843 -216726740 + AT_rich Low_complexity Low_complexity 1 59 0 613 206 82 0 chr2 36530047 36530217 -216726366 - L1MA8 LINE L1 -5 6286 6103 2429 136 48 19 chr2 36530217 36530439 -216726144 - Tigger2 DNA MER2_type 0 2718 2504 2020 156 3 0 chr2 36530439 36530747 -216725836 + AluSx SINE Alu 2 310 -2 2429 136 48 19 chr2 36530747 36530957 -216725626 - Tigger2 DNA MER2_type -214 2504 2273 412 134 30 0 chr2 36530947 36531014 -216725569 - Tigger2 DNA MER2_type -2649 69 1 * 1020 182 120 31 chr2 36531049 36531540 -216725043 - L1MA1 LINE L1 -4 6298 5576 5258 77 23 21 chr2 36531545 36532179 -216724404 - L1PA8 LINE L1 -20 6152 5514 2245 60 0 4 chr2 36532179 36532445 -216724138 - AluY SINE Alu -9 302 38 5258 77 23 21 chr2 36532445 36532588 -216723995 - L1PA8 LINE L1 -658 5514 5373 1555 154 16 22 chr2 36532590 36532863 -216723720 - L1MA1 LINE L1 -707 5584 5312 2277 80 3 29 chr2 36532863 36533176 -216723407 - AluY SINE Alu -6 305 1 1555 154 16 22 chr2 36533176 36533214 -216723369 - L1MA1 LINE L1 -979 5312 5275 1969 108 3 28 chr2 36533972 36534259 -216722324 - AluSq SINE Alu -33 280 1 204 135 0 0 chr2 36534296 36534333 -216722250 + (TG)n Simple_repeat Simple_repeat 2 38 0 413 269 8 0 chr2 36534357 36534476 -216722107 + MER97b DNA MER1_type? 60 179 -874 2741 156 79 219 chr2 36534519 36536022 -216720561 + MER52A LTR ERV1 1 1278 0 2163 117 3 7 chr2 36536957 36537264 -216719319 - AluSx SINE Alu -6 306 1 186 43 0 0 chr2 36538127 36538150 -216718433 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 627 250 144 55 chr2 36538511 36538882 -216717701 - MLT1C LTR MaLR -59 442 1 267 208 0 0 chr2 36539173 36539226 -216717357 + L2 LINE L2 3261 3313 0 803 188 0 0 chr2 36539266 36539399 -216717184 + FLAM_A SINE Alu 1 133 0 2448 149 76 24 chr2 36539962 36540539 -216716044 + pTR5 LTR ERV1 738 1344 -1094 4867 103 12 120 chr2 36540555 36541477 -216715106 + LTR12 LTR ERV1 5 826 0 240 373 51 8 chr2 36541478 36541596 -216714987 - L2 LINE L2 -47 3225 3103 181 318 32 0 chr2 36544182 36544245 -216712338 + MIR SINE MIR 35 99 -163 302 165 13 63 chr2 36544675 36544754 -216711829 + MLT1H LTR MaLR 55 129 -420 1813 164 9 21 chr2 36545441 36545776 -216710807 + MER2 DNA MER2_type 1 331 -14 413 292 139 5 chr2 36546486 36546695 -216709888 - L1ME4a LINE L1 -223 5898 5662 1827 206 28 47 chr2 36547874 36548344 -216708239 - MER65C LTR ERV1 0 461 1 472 345 49 40 chr2 36548344 36549093 -216707490 - MER65C-int LTR ERV1 0 6685 4209 10464 53 13 56 chr2 36549098 36550519 -216706064 + SVA Other Other 27 1386 0 2187 126 35 13 chr2 36651802 36652174 -216604409 + THE1C-int LTR MaLR 1201 1580 0 1883 118 76 25 chr2 36652174 36652531 -216604052 + THE1C LTR MaLR 1 375 0 32 86 0 0 chr2 36652956 36653037 -216603546 + AT_rich Low_complexity Low_complexity 1 81 0 23 33 0 0 chr2 36653373 36653403 -216603180 + AT_rich Low_complexity Low_complexity 1 30 0 650 233 32 42 chr2 36653547 36653830 -216602753 - L1MC5 LINE L1 -35 7926 7647 195 258 76 0 chr2 36653838 36653904 -216602679 + MIR SINE MIR 105 175 -87 23 33 0 0 chr2 36654028 36654058 -216602525 + AT_rich Low_complexity Low_complexity 1 30 0 1142 166 47 32 chr2 36654393 36654646 -216601937 - Tigger2 DNA MER2_type -10 2708 2452 3849 141 9 20 chr2 36654737 36655383 -216601200 - Tigger2 DNA MER2_type -1974 744 106 226 167 83 0 chr2 36656138 36656186 -216600397 - MER53 DNA DNA -136 53 2 787 307 56 0 chr2 36656188 36656419 -216600164 - L2 LINE L2 -1956 1358 1115 21 82 0 0 chr2 36656460 36656509 -216600074 + AT_rich Low_complexity Low_complexity 1 49 0 1624 173 60 33 chr2 36656855 36657220 -216599363 - THE1C LTR MaLR 0 375 1 33 0 0 0 chr2 36657451 36657484 -216599099 + AT_rich Low_complexity Low_complexity 1 33 0 469 218 11 22 chr2 36658732 36658911 -216597672 + CT-rich Low_complexity Low_complexity 2 178 0 25211 33 2 1 chr2 36659254 36663635 -216592948 - L1PA4 LINE L1 -21 6134 1749 3155 175 9 22 chr2 36663917 36664558 -216592025 + L1MA3 LINE L1 5453 6085 -220 2560 128 53 5 chr2 36664558 36664972 -216591611 + MER61C LTR ERV1 1 434 0 633 178 0 160 chr2 36664972 36665191 -216591392 + MER61C-int LTR ERV1 2 185 -5032 1107 166 6 131 chr2 36665237 36665550 -216591033 + MER61C-int LTR ERV1 181 454 -4763 19136 138 52 48 chr2 36665562 36666179 -216590404 + MER61C-int LTR ERV1 407 1020 -4197 2445 86 0 0 chr2 36666179 36666483 -216590100 - AluY SINE Alu -7 304 1 19136 138 52 48 chr2 36666483 36666656 -216589927 + MER61C-int LTR ERV1 1020 1191 -4026 2284 99 3 0 chr2 36666656 36666960 -216589623 - AluY SINE Alu -6 305 1 19136 138 52 48 chr2 36666960 36670580 -216586003 + MER61C-int LTR ERV1 1191 5217 0 1944 128 16 10 chr2 36670580 36670884 -216585699 + MER61C LTR ERV1 1 306 -128 2005 117 0 4 chr2 36670886 36671194 -216585389 - AluSg SINE Alu 0 307 1 610 316 89 31 chr2 36671462 36671943 -216584640 - L1M4 LINE L1 -1146 5236 4728 1145 203 50 10 chr2 36672058 36672358 -216584225 - MER33 DNA MER1_type -8 316 5 3233 190 21 24 chr2 36672522 36672952 -216583631 + LTR58 LTR ERV1 2 431 -248 1874 144 149 8 chr2 36672952 36673327 -216583256 - MSTA LTR MaLR 0 428 1 3233 190 21 24 chr2 36673327 36673574 -216583009 + LTR58 LTR ERV1 431 677 -2 348 341 29 22 chr2 36673591 36673864 -216582719 - L1MDa LINE L1 -3443 2939 2665 1870 143 4 4 chr2 36673880 36674160 -216582423 - AluSx SINE Alu -32 280 1 26 0 0 0 chr2 36674180 36674206 -216582377 + AT_rich Low_complexity Low_complexity 1 26 0 541 347 89 0 chr2 36674215 36674440 -216582143 + MIR SINE MIR 18 262 0 413 316 37 38 chr2 36674524 36674818 -216581765 - L1MDa LINE L1 -3739 2647 2381 378 263 55 67 chr2 36674816 36675046 -216581537 - L1MDa LINE L1 -4663 1719 1436 * 1701 158 76 20 chr2 36675201 36675555 -216581028 + THE1C LTR MaLR 1 374 -1 5211 179 43 54 chr2 36675556 36676824 -216579759 + THE1C-int LTR MaLR 1 1254 -326 9980 180 110 103 chr2 36676958 36681034 -216575549 - L1 LINE L1 -1516 6049 2003 1785 131 158 75 chr2 36681034 36681407 -216575176 - MER4A LTR ERV1 0 664 261 547 172 0 10 chr2 36681407 36681506 -216575077 - MER4A LTR ERV1 -566 98 1 9980 180 110 103 chr2 36681506 36682283 -216574300 - L1 LINE L1 -5562 2003 1233 2122 180 28 51 chr2 36682283 36682755 -216573828 - LOR1b LTR ERV1 0 461 1 9980 180 110 103 chr2 36682755 36683422 -216573161 - L1 LINE L1 -6332 1233 15 5818 30 3 0 chr2 36683975 36685186 -216571397 - L1PA4 LINE L1 -211 5944 4732 2524 33 0 0 chr2 36685186 36685483 -216571100 + L1PA4 LINE L1 5852 6152 -3 23 33 0 0 chr2 36685483 36685513 -216571070 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 36685547 36685568 -216571015 + AT_rich Low_complexity Low_complexity 1 21 0 1284 226 98 11 chr2 36685796 36685951 -216570632 + L1MB7 LINE L1 5652 5792 -386 2121 100 7 0 chr2 36685951 36686230 -216570353 - AluY SINE Alu -16 295 15 1284 226 98 11 chr2 36686230 36686549 -216570034 + L1MB7 LINE L1 5792 6177 -1 269 172 16 0 chr2 36686555 36686619 -216569964 + (TA)n Simple_repeat Simple_repeat 1 65 0 201 39 0 0 chr2 36686627 36686653 -216569930 + (CA)n Simple_repeat Simple_repeat 1 26 0 204 355 30 41 chr2 36687178 36687347 -216569236 - MER5A DNA MER1_type -22 167 1 2188 107 0 10 chr2 36688095 36688394 -216568189 + AluSc SINE Alu 1 296 -13 282 343 0 0 chr2 36688451 36688550 -216568033 + (TATATG)n Simple_repeat Simple_repeat 3 101 0 1676 244 38 34 chr2 36689288 36689785 -216566798 + MLT1D LTR MaLR 1 499 -6 231 329 0 0 chr2 36690215 36690288 -216566295 + L2 LINE L2 3199 3271 -1 24 32 0 0 chr2 36690732 36690763 -216565820 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 36691869 36691897 -216564686 + AT_rich Low_complexity Low_complexity 1 28 0 1141 290 34 3 chr2 36692024 36692317 -216564266 + MER45B DNA AcHobo 4 305 -735 1827 169 0 31 chr2 36693148 36693467 -216563116 - AluJb SINE Alu -3 309 1 23 54 0 0 chr2 36693481 36693518 -216563065 + AT_rich Low_complexity Low_complexity 1 37 0 851 67 8 0 chr2 36693704 36693823 -216562760 + (TTCC)n Simple_repeat Simple_repeat 3 122 0 270 129 290 0 chr2 36694255 36694317 -216562266 - MADE1 DNA Mariner 0 80 1 4315 208 49 22 chr2 36694319 36695037 -216561546 + L1MA7 LINE L1 5041 5803 -488 1203 210 83 28 chr2 36695037 36695361 -216561222 - MER2 DNA MER2_type -1 343 2 4315 208 49 22 chr2 36695361 36695852 -216560731 + L1MA7 LINE L1 5803 6279 -12 1777 296 86 37 chr2 36698758 36699756 -216556827 - L2 LINE L2 -25 3288 2232 508 285 154 14 chr2 36699763 36699984 -216556599 - L2 LINE L2 -1704 1610 1359 21 36 0 0 chr2 36700278 36700306 -216556277 + AT_rich Low_complexity Low_complexity 1 28 0 13563 63 7 2 chr2 36702408 36704144 -216552439 - L1P LINE L1 -4401 1745 1 738 155 0 0 chr2 36704144 36704260 -216552323 - Tigger2 DNA MER2_type -2602 116 1 604 144 19 0 chr2 36704260 36704364 -216552219 - L1MA5 LINE L1 -23 6979 6874 776 158 24 0 chr2 36704365 36704492 -216552091 + FLAM_C SINE Alu 1 130 -13 12223 216 62 31 chr2 36704496 36711145 -216545438 - L1MA5 LINE L1 -126 6876 11 2019 131 3 0 chr2 36711235 36711525 -216545058 - AluSx SINE Alu -2 310 20 203 211 19 0 chr2 36711644 36711696 -216544887 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 306 258 0 43 chr2 36711933 36712026 -216544557 - L1MC4 LINE L1 -1340 6702 6614 934 230 16 0 chr2 36714213 36714400 -216542183 - LTR16A LTR ERVL -9 441 252 2745 172 14 8 chr2 36714527 36715021 -216541562 - LOR1a LTR ERV1 0 497 1 282 383 51 16 chr2 36715179 36715432 -216541151 + L2 LINE L2 2435 2696 -618 2103 121 7 0 chr2 36715568 36715857 -216540726 - AluSx SINE Alu -19 293 3 25 51 0 0 chr2 36716273 36716312 -216540271 + AT_rich Low_complexity Low_complexity 1 39 0 287 260 57 113 chr2 36716438 36716792 -216539791 - L1ME4a LINE L1 -82 6039 5706 250 213 45 45 chr2 36717068 36717223 -216539360 + (TATAA)n Simple_repeat Simple_repeat 4 158 0 594 284 71 43 chr2 36717804 36718058 -216538525 - MIR SINE MIR 0 262 2 26 30 0 0 chr2 36718759 36718792 -216537791 + AT_rich Low_complexity Low_complexity 1 33 0 7032 143 15 21 chr2 36718878 36718912 -216537671 - MER66-int LTR ERV1 0 6676 6643 1788 179 0 7 chr2 36718912 36719213 -216537370 - AluSx SINE Alu -13 299 1 7032 143 15 21 chr2 36719213 36719639 -216536944 - MER66-int LTR ERV1 -33 6643 6216 1954 125 0 76 chr2 36719639 36719967 -216536616 - AluSx SINE Alu -9 303 1 7032 143 15 21 chr2 36719967 36720625 -216535958 - MER66-int LTR ERV1 -460 6216 5564 9987 187 20 50 chr2 36720666 36722804 -216533779 - MER66-int LTR ERV1 -2268 4408 2336 2530 189 31 9 chr2 36722792 36723526 -216533057 - MER66-int LTR ERV1 -4507 2169 1384 * 36 40 0 0 chr2 36724269 36724319 -216532264 + AT_rich Low_complexity Low_complexity 1 50 0 987 207 70 25 chr2 36726322 36726468 -216530115 + MER33 DNA MER1_type 5 143 -2442 2738 3 0 3 chr2 36726468 36726771 -216529812 + AluYa5 SINE Alu 1 302 -9 987 207 70 25 chr2 36726771 36726909 -216529674 + MER33 DNA MER1_type 143 302 -22 260 267 78 52 chr2 36726949 36727065 -216529518 + L2 LINE L2 3193 3311 -2 3766 196 31 40 chr2 36727998 36728923 -216527660 + L1MC3 LINE L1 6860 7776 -9 183 42 0 0 chr2 36728923 36728947 -216527636 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 715 177 8 8 chr2 36728947 36729077 -216527506 - FRAM SINE Alu -30 146 17 827 113 24 0 chr2 36729108 36729253 -216527330 - FLAM_C SINE Alu 0 164 17 2489 147 94 2 chr2 36730331 36730786 -216525797 - LOR1a LTR ERV1 0 497 1 26 0 0 0 chr2 36731958 36731984 -216524599 + AT_rich Low_complexity Low_complexity 1 26 0 2243 43 11 0 chr2 36731984 36732262 -216524321 - L1PA5 LINE L1 -7 6147 5867 252 125 50 0 chr2 36732262 36732302 -216524281 + L1P5 LINE L1 5680 5721 -430 7249 181 49 78 chr2 36733315 36735122 -216521461 + MER52A LTR ERV1 1 1755 0 974 249 75 19 chr2 36736921 36737242 -216519341 + MER2 DNA MER2_type 2 340 -4 736 104 64 8 chr2 36737470 36737595 -216518988 - AluSp/q SINE Alu -2 311 180 237 337 143 0 chr2 36737640 36737738 -216518845 + MIR3 SINE MIR 89 200 -8 22 35 0 0 chr2 36737808 36737837 -216518746 + AT_rich Low_complexity Low_complexity 1 29 0 2009 152 0 0 chr2 36737842 36738151 -216518432 + AluSx SINE Alu 1 309 -3 2243 62 0 7 chr2 36738410 36738683 -216517900 - AluY SINE Alu -20 291 21 209 371 21 0 chr2 36739970 36740110 -216516473 + L2 LINE L2 2644 2786 -528 265 304 101 19 chr2 36740369 36740527 -216516056 + MLT1I LTR MaLR 39 209 -200 251 143 0 0 chr2 36742008 36742043 -216514540 + Alu SINE Alu 2 36 -266 1226 91 81 16 chr2 36742046 36742232 -216514351 + AluSg/x SINE Alu 107 304 -8 324 238 0 48 chr2 36743512 36743596 -216512987 + L1MC4 LINE L1 6624 6703 -1339 613 278 117 68 chr2 36743672 36744126 -216512457 + MLT1H LTR MaLR 62 537 -12 2068 112 7 0 chr2 36744460 36744747 -216511836 + AluSq SINE Alu 1 289 -24 383 244 104 0 chr2 36744870 36745005 -216511578 - MER20B DNA MER1_type -41 742 594 644 249 68 42 chr2 36745133 36745370 -216511213 - MER20B DNA MER1_type -416 367 125 817 294 89 23 chr2 36745678 36746161 -216510422 - HAL1 LINE L1 -335 2172 1658 290 380 97 8 chr2 36746474 36746711 -216509872 - HAL1 LINE L1 -1926 581 324 1771 166 0 3 chr2 36747115 36747399 -216509184 + AluSx SINE Alu 3 285 -27 838 282 86 67 chr2 36747982 36749278 -216507305 - L1M4 LINE L1 -2159 3987 2668 923 226 26 34 chr2 36749321 36749587 -216506996 - L1MC3 LINE L1 -163 7622 7359 819 346 61 66 chr2 36749592 36751045 -216505538 - L1MEc LINE L1 -958 5424 3980 5766 221 41 79 chr2 36751095 36752822 -216503761 - L1 LINE L1 -1510 4636 2976 23 54 0 0 chr2 36752982 36753019 -216503564 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr2 36753051 36753072 -216503511 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 36753202 36753227 -216503356 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 36753267 36753292 -216503291 + AT_rich Low_complexity Low_complexity 1 25 0 194 156 22 0 chr2 36753335 36753380 -216503203 + CT-rich Low_complexity Low_complexity 1 46 0 394 287 139 43 chr2 36753409 36754314 -216502269 - L1MEc LINE L1 -2914 3468 2477 420 300 137 23 chr2 36754385 36754728 -216501855 - L1MEc LINE L1 -4109 2454 2073 504 297 75 65 chr2 36754744 36755378 -216501205 - L1MEc LINE L1 -4443 1939 1173 216 149 0 0 chr2 36756086 36756133 -216500450 + (CAAAAA)n Simple_repeat Simple_repeat 4 50 0 324 0 0 0 chr2 36759359 36759395 -216497188 + (TG)n Simple_repeat Simple_repeat 2 37 0 888 194 68 10 chr2 36760647 36760853 -216495730 + MER20 DNA MER1_type 1 218 -1 553 252 49 0 chr2 36760905 36761048 -216495535 + L2 LINE L2 3164 3313 0 1073 184 67 79 chr2 36761238 36761553 -216495030 - L1MA9 LINE L1 -38 6274 5964 1268 143 23 19 chr2 36761553 36761769 -216494814 - Tigger3b DNA MER2_type -741 490 274 587 188 10 0 chr2 36761767 36761868 -216494715 - Tigger3b DNA MER2_type -1129 102 1 * 279 89 22 0 chr2 36761917 36761962 -216494621 - MADE1 DNA Mariner 0 80 35 332 121 0 52 chr2 36762269 36762327 -216494256 + MLT1A1 LTR MaLR 1 55 -412 * 971 178 37 11 chr2 36762323 36762514 -216494069 + MLT1A1 LTR MaLR 170 365 0 564 292 97 84 chr2 36762521 36763117 -216493466 - HAL1b LINE L1 -650 698 95 180 77 0 0 chr2 36763706 36763732 -216492851 + (CAAAG)n Simple_repeat Simple_repeat 1 26 0 251 227 0 68 chr2 36763793 36763881 -216492702 - L1MC/D LINE L1 -1926 5882 5801 21 0 0 0 chr2 36764611 36764632 -216491951 + AT_rich Low_complexity Low_complexity 1 21 0 2186 128 0 0 chr2 36764660 36764965 -216491618 - AluSx SINE Alu -7 305 1 1384 167 9 66 chr2 36765391 36765709 -216490874 - AluJo SINE Alu -12 300 1 405 397 15 15 chr2 36767121 36767320 -216489263 + MIR SINE MIR 20 218 -44 2220 105 12 6 chr2 36767362 36767705 -216488878 - THE1C-int LTR MaLR -1233 347 3 2550 48 0 10 chr2 36767724 36768037 -216488546 - AluY SINE Alu -1 310 1 931 106 8 0 chr2 36768037 36768169 -216488414 - THE1C LTR MaLR -6 369 237 2244 101 0 0 chr2 36768679 36768977 -216487606 + AluSc SINE Alu 1 298 -11 250 225 175 58 chr2 36769466 36769586 -216486997 - MER5A DNA MER1_type -1 188 55 1709 141 0 57 chr2 36772601 36772756 -216483827 - AluSx SINE Alu -30 282 151 2193 110 0 10 chr2 36772756 36773056 -216483527 - AluSx SINE Alu -15 297 1 1709 141 0 57 chr2 36773056 36773199 -216483384 - AluSx SINE Alu -161 151 1 2313 78 0 31 chr2 36773432 36773751 -216482832 - AluY SINE Alu 0 311 3 355 274 49 10 chr2 36774288 36774390 -216482193 - MIR SINE MIR -50 212 107 23 33 0 0 chr2 36774406 36774436 -216482147 + AT_rich Low_complexity Low_complexity 1 30 0 228 153 51 0 chr2 36774609 36774668 -216481915 + (TA)n Simple_repeat Simple_repeat 1 62 0 490 297 26 0 chr2 36774681 36774836 -216481747 - LTR16A LTR ERVL -9 441 283 25 51 0 0 chr2 36775732 36775771 -216480812 + AT_rich Low_complexity Low_complexity 1 39 0 275 301 41 49 chr2 36776714 36776837 -216479746 + MIR SINE MIR 1 122 -140 620 275 42 5 chr2 36776896 36777085 -216479498 + L2 LINE L2 3107 3302 -11 236 288 234 5 chr2 36777180 36777364 -216479219 + MIR SINE MIR 36 261 -1 21 89 0 0 chr2 36778083 36778139 -216478444 + AT_rich Low_complexity Low_complexity 1 56 0 23 0 0 0 chr2 36778341 36778364 -216478219 + AT_rich Low_complexity Low_complexity 1 23 0 1052 316 76 8 chr2 36778377 36778773 -216477810 - LTR16A LTR ERVL -9 441 19 943 272 13 8 chr2 36779340 36779575 -216477008 + LTR16A LTR ERVL 204 439 -11 1468 334 59 32 chr2 36780119 36780937 -216475646 + HERV16 LTR ERVL 734 1573 -3423 954 189 37 65 chr2 36780961 36781178 -216475405 + MER20 DNA MER1_type 1 211 -8 977 281 93 70 chr2 36781204 36781744 -216474839 + HERV16 LTR ERVL 1659 2210 -2786 3587 270 110 36 chr2 36781989 36783589 -216472994 + L1ME LINE L1 254 1733 -4347 1048 228 29 63 chr2 36783589 36783967 -216472616 - MLT1A1 LTR MaLR 0 365 1 3587 270 110 36 chr2 36783967 36785516 -216471067 + L1ME LINE L1 1733 3165 -2915 2224 96 0 3 chr2 36785516 36785808 -216470775 - AluSg1 SINE Alu -18 291 1 3587 270 110 36 chr2 36785808 36786537 -216470046 + L1ME LINE L1 3165 4418 -1662 1967 151 3 0 chr2 36786537 36786842 -216469741 + AluSx SINE Alu 1 306 -6 3587 270 110 36 chr2 36786842 36786919 -216469664 + L1ME LINE L1 4418 4488 -1592 744 199 75 70 chr2 36786921 36787107 -216469476 + MLT2B1 LTR ERVL 150 336 -184 1594 281 64 12 chr2 36787107 36788354 -216468229 + L1ME LINE L1 4757 6094 -10 1638 322 55 45 chr2 36788386 36789515 -216467068 + HERV16 LTR ERVL 2268 3076 -1920 6609 174 31 26 chr2 36789750 36791137 -216465446 - Ricksha DNA DNA -11 3235 1882 587 162 0 18 chr2 36791135 36791246 -216465337 - Ricksha DNA DNA -1936 110 2 * 1913 157 6 10 chr2 36791319 36791632 -216464951 + AluSx SINE Alu 1 312 0 827 318 68 23 chr2 36793054 36793453 -216463130 + LTR16A LTR ERVL 12 428 -22 346 273 123 45 chr2 36793486 36793640 -216462943 + L1MEd LINE L1 594 759 -5360 733 242 79 44 chr2 36793649 36794054 -216462529 + L1MEd LINE L1 791 1209 -4910 21 0 0 0 chr2 36794089 36794110 -216462473 + AT_rich Low_complexity Low_complexity 1 21 0 245 250 29 0 chr2 36794223 36794291 -216462292 + L1MEd LINE L1 1293 1362 -4767 1225 181 28 113 chr2 36794470 36794869 -216461714 - MLT1A1 LTR MaLR 0 365 1 206 179 60 0 chr2 36795933 36796000 -216460583 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 2298 97 0 0 chr2 36796391 36796699 -216459884 + AluSg SINE Alu 1 308 -2 1983 175 86 2 chr2 36797597 36797992 -216458591 - MSTB1 LTR MaLR -4 428 1 2272 99 3 3 chr2 36798373 36798686 -216457897 + AluSp SINE Alu 1 313 0 316 0 45 0 chr2 36800300 36800344 -216456239 + (TG)n Simple_repeat Simple_repeat 1 46 0 180 0 0 0 chr2 36800343 36800363 -216456220 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 537 250 54 14 chr2 36800608 36800756 -216455827 + L2 LINE L2 3160 3313 0 252 396 0 0 chr2 36800776 36800867 -216455716 + L2 LINE L2 3162 3252 -20 270 284 14 0 chr2 36801086 36801160 -216455423 - MIR SINE MIR -14 248 174 2310 113 8 41 chr2 36801165 36801553 -216455030 + THE1C LTR MaLR 1 375 0 446 274 57 8 chr2 36801564 36801688 -216454895 - MIR SINE MIR -110 152 23 443 208 0 40 chr2 36801732 36801833 -216454750 - MER2 DNA MER2_type -248 97 1 319 286 146 11 chr2 36802076 36802254 -216454329 + MIR SINE MIR 60 261 -1 3446 187 31 42 chr2 36802387 36802607 -216453976 - MER44D DNA MER2_type -1889 598 377 2328 142 53 5 chr2 36802607 36803023 -216453560 - L1PA16 LINE L1 -11 6155 5720 3446 187 31 42 chr2 36803023 36803535 -216453048 - MER44D DNA MER2_type -2110 377 2 202 377 9 44 chr2 36803743 36803857 -216452726 - MIR SINE MIR -83 125 16 840 169 0 0 chr2 36804056 36804204 -216452379 - L1MA3 LINE L1 0 7724 7577 1810 172 49 58 chr2 36804204 36804755 -216451828 - MLT2A2 LTR ERVL 0 554 1 12363 168 38 53 chr2 36804755 36804974 -216451609 - L1MA3 LINE L1 -143 7581 7360 3746 42 0 0 chr2 36804974 36805428 -216451155 - L1PA4 LINE L1 0 6155 5702 12363 168 38 53 chr2 36805428 36807642 -216448941 - L1MA3 LINE L1 -364 7360 5114 234 0 0 0 chr2 36807642 36807668 -216448915 + (TTA)n Simple_repeat Simple_repeat 2 27 0 12363 168 38 53 chr2 36807668 36808806 -216447777 - L1MA3 LINE L1 -2610 5114 3960 2340 103 3 0 chr2 36808806 36809117 -216447466 - AluSx SINE Alu 0 312 1 12363 168 38 53 chr2 36809117 36810152 -216446431 - L1MA3 LINE L1 -3764 3960 3082 1985 127 24 63 chr2 36810152 36810531 -216446052 - THE1B LTR MaLR 0 364 1 12363 168 38 53 chr2 36810531 36811701 -216444882 - L1MA3 LINE L1 -4642 3082 1896 2488 217 2 14 chr2 36811694 36812205 -216444378 - L1MA3 LINE L1 -7048 517 13 * 2148 236 63 22 chr2 36812535 36813111 -216443472 - L1M4 LINE L1 -1870 4276 3672 1529 278 41 8 chr2 36813111 36813597 -216442986 - MLT1D LTR MaLR 0 505 4 2148 236 63 22 chr2 36813597 36813643 -216442940 - L1M4 LINE L1 -2474 3672 3629 647 234 31 26 chr2 36813644 36813836 -216442747 + L1MB8 LINE L1 5985 6177 -1 26 30 0 0 chr2 36814068 36814101 -216442482 + AT_rich Low_complexity Low_complexity 1 33 0 184 333 132 65 chr2 36814365 36815129 -216441454 - L2 LINE L2 -423 2891 2077 45 45 0 0 chr2 36815133 36815199 -216441384 + AT_rich Low_complexity Low_complexity 1 66 0 308 333 48 48 chr2 36815674 36815863 -216440720 + L1ME LINE L1 4 192 -5878 211 213 21 0 chr2 36816002 36816049 -216440534 + MIR SINE MIR 162 209 -53 2083 117 3 3 chr2 36817353 36817661 -216438922 + AluSc SINE Alu 1 308 -1 387 41 0 0 chr2 36819369 36819418 -216437165 + (TG)n Simple_repeat Simple_repeat 2 50 0 190 260 0 96 chr2 36819798 36819871 -216436712 + MER5A DNA MER1_type 124 189 0 799 277 47 16 chr2 36820694 36820947 -216435636 - MIR SINE MIR 0 262 2 276 332 58 23 chr2 36821452 36821762 -216434821 - L1ME LINE L1 -286 5884 5564 25 0 0 0 chr2 36821982 36822007 -216434576 + AT_rich Low_complexity Low_complexity 1 25 0 625 344 80 35 chr2 36822162 36822903 -216433680 - L1ME LINE L1 -1301 4845 4072 245 214 0 100 chr2 36823354 36823424 -216433159 + MLT1F1 LTR MaLR 55 117 -450 1889 199 49 76 chr2 36823429 36824037 -216432546 + L1MD3 LINE L1 7402 7993 -2 188 111 28 0 chr2 36824571 36824607 -216431976 + GA-rich Low_complexity Low_complexity 4 40 0 319 293 16 0 chr2 36824958 36825081 -216431502 - L1MC5 LINE L1 -466 7495 7371 1035 188 132 91 chr2 36825093 36825439 -216431144 - L1MC5 LINE L1 -823 7138 6765 191 36 36 0 chr2 36825439 36825467 -216431116 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1035 188 132 91 chr2 36825467 36825605 -216430978 - L1MC5 LINE L1 -1196 6765 6634 784 281 102 61 chr2 36826198 36826803 -216429780 - L1MC5 LINE L1 -1883 5925 5296 1557 189 3 10 chr2 36826835 36827136 -216429447 - AluJo SINE Alu 0 312 14 994 232 99 0 chr2 36827227 36827499 -216429084 - MER58B DNA MER1_type 0 341 43 14197 189 18 4 chr2 36827526 36831544 -216425039 - L1MA3 LINE L1 0 7724 3649 2540 170 20 38 chr2 36831537 36832037 -216424546 - L1MA3 LINE L1 -7060 505 15 * 604 330 71 35 chr2 36832037 36832839 -216423744 - L1MC5 LINE L1 -1946 4200 3370 2371 163 9 32 chr2 36832949 36833385 -216423198 + MSTB LTR MaLR 1 426 0 21 36 0 0 chr2 36833748 36833776 -216422807 + AT_rich Low_complexity Low_complexity 1 28 0 37 23 0 0 chr2 36834898 36834942 -216421641 + AT_rich Low_complexity Low_complexity 1 44 0 265 264 204 30 chr2 36835376 36835577 -216421006 - HAL1b LINE L1 -733 615 380 31 44 0 0 chr2 36835681 36835726 -216420857 + AT_rich Low_complexity Low_complexity 1 45 0 212 215 62 0 chr2 36835780 36835845 -216420738 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 24 32 0 0 chr2 36836232 36836263 -216420320 + AT_rich Low_complexity Low_complexity 1 31 0 210 143 0 48 chr2 36838286 36838328 -216418255 + (TAAAAA)n Simple_repeat Simple_repeat 1 40 0 1004 239 40 71 chr2 36838403 36838824 -216417759 + L1ME LINE L1 4997 5406 -835 2198 94 10 10 chr2 36838824 36839132 -216417451 + AluSq SINE Alu 2 309 -4 1004 239 40 71 chr2 36839132 36839223 -216417360 + L1ME LINE L1 5406 5498 -743 241 293 49 37 chr2 36840000 36840082 -216416501 + L2 LINE L2 3189 3271 -1 2754 22 0 0 chr2 36841351 36841665 -216414918 - AluYb8 SINE Alu -4 314 1 26 0 0 0 chr2 36842078 36842104 -216414479 + AT_rich Low_complexity Low_complexity 1 26 0 2057 120 0 10 chr2 36844060 36844359 -216412224 - AluSg SINE Alu -14 296 1 272 227 23 91 chr2 36844360 36844448 -216412135 + MIR SINE MIR 88 169 -93 22 0 0 0 chr2 36844476 36844498 -216412085 + AT_rich Low_complexity Low_complexity 1 22 0 2272 272 87 44 chr2 36844602 36844737 -216411846 - L1M4 LINE L1 -1820 4326 4198 312 27 0 0 chr2 36844737 36844774 -216411809 + (TG)n Simple_repeat Simple_repeat 2 38 0 1835 196 75 8 chr2 36844779 36845178 -216411405 - MSTB LTR MaLR 0 426 1 2272 272 87 44 chr2 36845178 36845644 -216410939 - L1M4 LINE L1 -1951 4195 3750 1849 147 40 0 chr2 36845644 36845943 -216410640 - AluSx SINE Alu -1 311 1 2272 272 87 44 chr2 36845943 36847186 -216409397 - L1M4 LINE L1 -2396 3750 2396 21 36 0 0 chr2 36847500 36847528 -216409055 + AT_rich Low_complexity Low_complexity 1 28 0 786 220 17 62 chr2 36847968 36848209 -216408374 - L1M4 LINE L1 -1244 4902 4673 1038 267 74 30 chr2 36848585 36848989 -216407594 - L1ME1 LINE L1 -5 6144 5723 920 248 44 35 chr2 36848984 36849526 -216407057 - L1ME1 LINE L1 -822 5307 4704 * 696 277 11 11 chr2 36849529 36849717 -216406866 + MER58A DNA MER1_type 37 224 0 38 22 0 0 chr2 36849808 36849853 -216406730 + AT_rich Low_complexity Low_complexity 1 45 0 338 317 116 39 chr2 36850010 36850294 -216406289 + L1ME LINE L1 5491 5796 -325 395 342 40 13 chr2 36851230 36851458 -216405125 - MIR SINE MIR -16 246 13 291 318 119 35 chr2 36852320 36853016 -216403567 + HAL1 LINE L1 947 1701 -806 1504 169 91 20 chr2 36853131 36853481 -216403102 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr2 36853506 36853527 -216403056 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr2 36853874 36853902 -216402681 + AT_rich Low_complexity Low_complexity 1 28 0 347 202 20 130 chr2 36854152 36854398 -216402185 + HAL1b LINE L1 746 2350 -157 198 192 0 0 chr2 36854460 36854512 -216402071 + (TA)n Simple_repeat Simple_repeat 1 52 0 429 229 0 38 chr2 36854616 36854721 -216401862 - HsTC2 DNA Tc2 -1793 105 5 1570 254 62 81 chr2 36855668 36856395 -216400188 + L1M3e LINE L1 466 1178 -6311 3253 249 51 71 chr2 36856419 36857735 -216398848 + L1M3e LINE L1 2011 3289 -4276 300 53 0 0 chr2 36857735 36857773 -216398810 + (TG)n Simple_repeat Simple_repeat 1 38 0 3253 249 51 71 chr2 36857773 36858095 -216398488 + L1M3e LINE L1 3289 3616 -3949 985 292 144 7 chr2 36858150 36858831 -216397752 - L1ME1 LINE L1 -1745 4384 3611 602 244 36 36 chr2 36858850 36859018 -216397565 - FAM SINE Alu -17 168 1 260 244 77 0 chr2 36859064 36859142 -216397441 - L1ME1 LINE L1 -2590 3539 3456 1159 294 58 40 chr2 36860294 36861111 -216395472 - L1ME1 LINE L1 -3050 3079 2249 248 261 269 27 chr2 36861300 36861557 -216395026 - L1ME1 LINE L1 -4654 1656 1338 312 368 13 13 chr2 36861661 36861816 -216394767 - L1ME1 LINE L1 -4910 1209 1055 27 0 0 0 chr2 36862765 36862792 -216393791 + AT_rich Low_complexity Low_complexity 1 27 0 436 320 45 17 chr2 36863293 36863471 -216393112 + MIR SINE MIR 22 204 -58 209 157 0 39 chr2 36864129 36864180 -216392403 + A-rich Low_complexity Low_complexity 1 49 0 1720 150 43 40 chr2 36864802 36865176 -216391407 - THE1C LTR MaLR 0 375 1 183 230 70 50 chr2 36865182 36865282 -216391301 - MIR SINE MIR -10 252 151 229 397 26 0 chr2 36865534 36865612 -216390971 - L3 LINE CR1 -3 1574 1495 190 439 9 0 chr2 36866134 36866248 -216390335 - L2 LINE L2 -635 2679 2565 243 0 0 0 chr2 36866568 36866595 -216389988 + (CA)n Simple_repeat Simple_repeat 2 28 0 6083 174 24 26 chr2 36869017 36871957 -216384626 + L1PA11 LINE L1 10 2956 -3533 858 30 0 0 chr2 36871957 36872057 -216384526 + L1PA3 LINE L1 6052 6152 -3 6083 174 24 26 chr2 36872057 36875492 -216381091 + L1PA11 LINE L1 2956 6488 -1 400 232 0 0 chr2 36875580 36875649 -216380934 - Tigger2 DNA MER2_type -10 2708 2640 1304 156 128 12 chr2 36875649 36875935 -216380648 - AluSg1 SINE Alu 0 315 1 6703 156 44 14 chr2 36875935 36877128 -216379455 - Tigger2 DNA MER2_type -60 2658 1430 3471 160 26 14 chr2 36877122 36877771 -216378812 - Tigger2 DNA MER2_type -2057 661 5 * 1824 134 66 41 chr2 36878195 36878560 -216378023 + THE1C LTR MaLR 1 374 -1 227 281 44 44 chr2 36878615 36878729 -216377854 + L1MCa LINE L1 1080 1193 -5233 1537 230 13 10 chr2 36878763 36879067 -216377516 + L1MB8 LINE L1 8 312 -6547 * 3697 239 67 16 chr2 36879062 36880073 -216376510 + L1MB8 LINE L1 523 1585 -5274 568 264 48 50 chr2 36880071 36880453 -216376130 + L1PBa LINE L1 1593 1988 -4228 * 977 162 62 0 chr2 36880546 36880725 -216375858 - L1PB4 LINE L1 -3 6153 5964 6213 255 37 50 chr2 36880832 36882889 -216373694 + L1MB8 LINE L1 2618 4701 -2294 2072 90 36 7 chr2 36882889 36883166 -216373417 + AluY SINE Alu 1 285 -26 6213 255 37 50 chr2 36883166 36883396 -216373187 + L1MB8 LINE L1 4701 4933 -2062 348 83 0 0 chr2 36883396 36883444 -216373139 + (TAA)n Simple_repeat Simple_repeat 2 49 0 6213 255 37 50 chr2 36883444 36884163 -216372420 + L1MB8 LINE L1 4933 5660 -1335 11303 30 2 1 chr2 36884163 36886286 -216370297 + L1PA4 LINE L1 4028 6154 -1 6213 255 37 50 chr2 36886286 36886416 -216370167 + L1MB8 LINE L1 5660 5790 -1205 357 24 0 0 chr2 36886416 36886458 -216370125 + (TG)n Simple_repeat Simple_repeat 2 43 0 6213 255 37 50 chr2 36886458 36887513 -216369070 + L1MB8 LINE L1 5790 6619 -376 4837 110 13 7 chr2 36887530 36888284 -216368299 - L1MA1 LINE L1 0 7721 6963 862 159 0 0 chr2 36888285 36888417 -216368166 + AluJb SINE Alu 1 132 -180 14352 173 20 31 chr2 36888424 36889204 -216367379 - L1MA1 LINE L1 -745 6820 6033 2083 112 25 0 chr2 36889204 36889482 -216367101 + AluSx SINE Alu 1 285 -27 14352 173 20 31 chr2 36889482 36889637 -216366946 - L1MA1 LINE L1 -1532 6033 5878 192 40 0 0 chr2 36889637 36889662 -216366921 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 14352 173 20 31 chr2 36889662 36895050 -216361533 - L1MA1 LINE L1 -1687 5878 12 951 241 50 64 chr2 36895056 36895088 -216361495 + L1MB8 LINE L1 6614 6645 -344 13524 152 30 10 chr2 36895088 36897454 -216359129 + Tigger1 DNA MER2_type 4 2418 0 951 241 50 64 chr2 36897454 36897798 -216358785 + L1MB8 LINE L1 6645 6985 -4 2266 232 96 30 chr2 36897929 36899140 -216357443 + L1MCb LINE L1 832 2378 -4367 257 75 25 0 chr2 36899151 36899191 -216357392 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 2629 247 48 22 chr2 36899198 36900189 -216356394 + L1MCb LINE L1 2540 3519 -3045 593 301 63 3 chr2 36900223 36900572 -216356011 + L1MCb LINE L1 4699 5068 -1496 34 0 0 0 chr2 36900595 36900629 -216355954 + AT_rich Low_complexity Low_complexity 1 34 0 209 200 0 0 chr2 36900711 36900756 -216355827 + (TATATG)n Simple_repeat Simple_repeat 3 47 0 252 185 0 0 chr2 36901069 36901123 -216355460 + GA-rich Low_complexity Low_complexity 3 56 0 868 181 57 76 chr2 36901173 36901383 -216355200 - MER2 DNA MER2_type -139 206 1 38355 54 52 1 chr2 36901593 36907441 -216349142 + L1PA4 LINE L1 1 6155 0 794 263 21 29 chr2 36907518 36907588 -216348995 + MLT1E1 LTR MaLR 417 486 -168 2040 143 0 7 chr2 36907588 36907888 -216348695 + AluSx SINE Alu 1 298 -14 794 263 21 29 chr2 36907888 36908057 -216348526 + MLT1E1 LTR MaLR 486 654 0 232 315 0 0 chr2 36908735 36908789 -216347794 + L2 LINE L2 3209 3262 -10 24 77 0 0 chr2 36909915 36909967 -216346616 + AT_rich Low_complexity Low_complexity 1 52 0 203 283 11 65 chr2 36910732 36910824 -216345759 - L2 LINE L2 -810 2504 2418 258 258 0 0 chr2 36912041 36912103 -216344480 - MLT1J2 LTR MaLR -28 422 361 21 36 0 0 chr2 36912659 36912687 -216343896 + AT_rich Low_complexity Low_complexity 1 28 0 278 348 14 13 chr2 36913941 36914066 -216342517 + MIR SINE MIR 22 146 -62 2486 81 41 9 chr2 36915292 36915636 -216340947 + THE1A LTR MaLR 1 355 0 10954 98 4 7 chr2 36915636 36917215 -216339368 + THE1A-int LTR MaLR 1 1574 -6 2521 82 29 3 chr2 36917220 36917563 -216339020 + THE1A LTR MaLR 1 352 -3 391 293 104 73 chr2 36918879 36919292 -216337291 + LTR33 LTR ERVL 1 426 -95 1303 258 104 43 chr2 36919294 36919833 -216336750 + MLT1G LTR MaLR 1 572 -18 297 240 0 13 chr2 36919850 36919925 -216336658 + LTR33 LTR ERVL 424 497 -24 214 136 0 119 chr2 36920898 36920957 -216335626 + L2 LINE L2 3221 3272 0 2223 131 39 45 chr2 36922894 36923253 -216333330 + LTR18A LTR ERVL 1 357 0 1441 181 3 34 chr2 36923277 36923570 -216333013 + HERVL18 LTR ERVL 95 378 -5669 * 1594 190 10 7 chr2 36923569 36924074 -216332509 + HERVL18 LTR ERVL 1241 1810 -4237 1294 133 22 2 chr2 36924073 36924341 -216332242 + HERVL18 LTR ERVL 2119 2452 -3595 * 4881 167 2 25 chr2 36924340 36925219 -216331364 + HERVL18 LTR ERVL 2720 3578 -2469 613 128 11 0 chr2 36925222 36925316 -216331267 + HERVL18 LTR ERVL 4394 4488 -1559 2294 126 22 44 chr2 36925584 36925949 -216330634 + LTR18A LTR ERVL 1 357 0 1406 114 22 13 chr2 36926385 36926613 -216329970 + MER50 LTR ERV1 3 232 -502 1342 133 13 94 chr2 36926615 36926924 -216329659 + MER50 LTR ERV1 435 718 -16 432 0 0 0 chr2 36926924 36926972 -216329611 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 210 71 0 0 chr2 36926973 36927001 -216329582 + (CATA)n Simple_repeat Simple_repeat 1 28 0 856 266 149 0 chr2 36927315 36927597 -216328986 - MLT1G1 LTR MaLR -5 590 267 927 314 93 20 chr2 36928836 36929423 -216327160 + L2 LINE L2 2606 3312 -1 220 171 0 0 chr2 36930456 36930497 -216326086 + MIR3 SINE MIR 168 208 0 330 324 70 38 chr2 36933380 36933565 -216323018 + MIR SINE MIR 2 192 -70 204 111 0 0 chr2 36934662 36934698 -216321885 + (CAA)n Simple_repeat Simple_repeat 2 37 0 2136 143 7 0 chr2 36934704 36935011 -216321572 + AluSx SINE Alu 2 310 -2 2711 19 0 0 chr2 36935096 36935416 -216321167 - L1PA4 LINE L1 -383 5772 5453 3200 33 5 8 chr2 36935416 36935804 -216320779 + L1PA4 LINE L1 5762 6155 0 190 278 56 0 chr2 36935805 36935859 -216320724 + MER5A DNA MER1_type 61 117 -72 368 241 108 32 chr2 36936592 36936750 -216319833 + LTR33A LTR ERVL 61 230 -293 245 343 97 0 chr2 36937160 36937338 -216319245 - MIR3 SINE MIR -7 201 3 249 410 0 0 chr2 36938003 36938086 -216318497 + MIR SINE MIR 4 86 -176 310 128 0 0 chr2 36938416 36938463 -216318120 + L1PBa LINE L1 1109 1155 -5708 9364 207 27 10 chr2 36938469 36942165 -216314418 + L1PBa LINE L1 1311 5090 -1772 1245 239 56 54 chr2 36942322 36942786 -216313797 - MLT1C LTR MaLR 0 467 3 266 229 99 30 chr2 36942790 36942921 -216313662 - MLT1J LTR MaLR -345 166 27 251 302 0 0 chr2 36942968 36943031 -216313552 + L2 LINE L2 3251 3313 0 474 352 72 7 chr2 36943353 36943660 -216312923 + MER102b DNA MER1_type 1 327 -14 25 0 0 0 chr2 36943771 36943796 -216312787 + AT_rich Low_complexity Low_complexity 1 25 0 4975 310 108 34 chr2 36943982 36944862 -216311721 - L2 LINE L2 -7 3306 2493 2134 211 54 16 chr2 36944862 36945360 -216311223 - MLT2B1 LTR ERVL 0 520 4 4975 310 108 34 chr2 36945360 36946769 -216309814 - L2 LINE L2 -820 2493 732 1721 180 10 13 chr2 36946769 36947069 -216309514 - AluJo SINE Alu -13 299 1 4975 310 108 34 chr2 36947069 36947737 -216308846 - L2 LINE L2 -2581 732 115 704 234 136 8 chr2 36947882 36948117 -216308466 + MER96B DNA MER1_type? 145 409 -8 388 228 0 41 chr2 36948535 36948658 -216307925 + L2 LINE L2 2328 2445 -869 1693 169 60 41 chr2 36949514 36949882 -216306701 + THE1C LTR MaLR 1 375 0 354 115 0 0 chr2 36949966 36950027 -216306556 + (CA)n Simple_repeat Simple_repeat 2 62 0 1100 172 199 0 chr2 36950456 36950717 -216305866 + MER47A DNA MER2_type 53 365 -1 2210 116 17 9 chr2 36954564 36954910 -216301673 + L1PA11 LINE L1 5825 6173 -1 374 232 0 0 chr2 36954998 36955067 -216301516 - Tigger2 DNA MER2_type -10 2708 2640 1313 156 128 12 chr2 36955067 36955353 -216301230 - AluSg1 SINE Alu 0 315 1 6310 156 45 14 chr2 36955353 36956542 -216300041 - Tigger2 DNA MER2_type -60 2658 1433 3272 160 26 14 chr2 36956540 36957189 -216299394 - Tigger2 DNA MER2_type -2057 661 5 * 1827 134 66 41 chr2 36957613 36957978 -216298605 + THE1C LTR MaLR 1 374 -1 354 340 31 12 chr2 36957985 36958147 -216298436 + L1MCa LINE L1 1029 1193 -5233 1438 230 13 10 chr2 36958181 36958485 -216298098 + L1M4b LINE L1 8 312 -6547 * 3385 242 66 15 chr2 36958480 36959491 -216297092 + L1M4b LINE L1 523 1585 -5274 484 256 44 51 chr2 36959489 36959865 -216296718 + L1PBa LINE L1 1593 1953 -4263 * 975 162 62 0 chr2 36959964 36960143 -216296440 - L1PB4 LINE L1 -3 6153 5964 5645 261 33 41 chr2 36960250 36962307 -216294276 + L1M4b LINE L1 2618 4690 -2267 2081 90 36 7 chr2 36962307 36962584 -216293999 + AluY SINE Alu 1 285 -26 5645 261 33 41 chr2 36962584 36962814 -216293769 + L1M4b LINE L1 4690 4920 -2037 369 62 0 0 chr2 36962814 36962862 -216293721 + (TAA)n Simple_repeat Simple_repeat 2 49 0 5645 261 33 41 chr2 36962862 36963432 -216293151 + L1M4b LINE L1 4920 5414 -1543 412 259 54 7 chr2 36963436 36963583 -216293000 + L1M4 LINE L1 5327 5480 -1477 * 10835 33 3 0 chr2 36963581 36965566 -216291017 + L1PA5 LINE L1 4028 6017 -137 597 236 11 22 chr2 36965567 36965749 -216290834 - L1M4 LINE L1 -785 5361 5182 1429 132 38 0 chr2 36965824 36966090 -216290493 + L1MA4 LINE L1 6014 6289 -11 444 319 58 16 chr2 36966144 36966332 -216290251 + L2 LINE L2 2936 3131 -182 365 188 0 0 chr2 36966767 36966831 -216289752 + L2 LINE L2 3207 3270 -2 240 194 32 16 chr2 36966833 36966895 -216289688 + GA-rich Low_complexity Low_complexity 3 65 0 2419 93 0 3 chr2 36968770 36969081 -216287502 + AluSq SINE Alu 1 310 -3 495 350 14 18 chr2 36969705 36969922 -216286661 + MLT1I LTR MaLR 3 218 -191 2656 117 7 21 chr2 36969946 36970119 -216286464 + L1PA13 LINE L1 5725 5899 -264 2382 141 6 3 chr2 36970119 36970482 -216286101 - THE1B LTR MaLR 0 364 1 2656 117 7 21 chr2 36970482 36970734 -216285849 + L1PA13 LINE L1 5899 6144 -19 1620 281 28 67 chr2 36970841 36971231 -216285352 + MLT1E LTR MaLR 3 407 -186 2256 122 0 0 chr2 36971231 36971543 -216285040 + AluSx SINE Alu 1 312 0 1620 281 28 67 chr2 36971543 36971661 -216284922 + MLT1E LTR MaLR 407 485 -108 1366 106 37 5 chr2 36971661 36971879 -216284704 - L1PA11 LINE L1 -1 6173 5949 1620 281 28 67 chr2 36971879 36971984 -216284599 + MLT1E LTR MaLR 485 593 0 247 270 0 0 chr2 36971984 36972047 -216284536 + MLT1I LTR MaLR 345 407 -2 263 183 17 0 chr2 36972124 36972217 -216284366 + AluSc SINE Alu 239 332 0 240 191 0 0 chr2 36972767 36972814 -216283769 + (GAATG)n Simple_repeat Simple_repeat 1 47 0 1719 211 53 17 chr2 36973521 36973996 -216282587 + Charlie4a DNA MER1_type 16 507 -1 420 280 65 12 chr2 36975373 36975541 -216281042 + MIR SINE MIR 79 255 -7 1539 177 63 23 chr2 36975998 36976349 -216280234 + MLT1A1 LTR MaLR 1 365 0 287 291 0 23 chr2 36976396 36976482 -216280101 + GA-rich Low_complexity Low_complexity 4 87 0 1641 129 0 0 chr2 36977268 36977501 -216279082 - AluSg/x SINE Alu -3 307 75 202 318 57 23 chr2 36977505 36977593 -216278990 - MIR SINE MIR -85 123 33 330 285 44 36 chr2 36979365 36979502 -216277081 + L1MEc LINE L1 211 348 -6048 1792 277 77 50 chr2 36979589 36980516 -216276067 + L1MEc LINE L1 513 1488 -4908 2730 10 10 7 chr2 36980516 36980825 -216275758 + AluYa5 SINE Alu 1 310 -1 1792 277 77 50 chr2 36980825 36981229 -216275354 + L1MEc LINE L1 1488 1880 -4516 210 37 0 0 chr2 36981246 36981273 -216275310 + (CA)n Simple_repeat Simple_repeat 2 28 0 3434 231 56 27 chr2 36981432 36982687 -216273896 + L1MEc LINE L1 2145 3420 -2795 2116 129 3 0 chr2 36982687 36982981 -216273602 - AluSq SINE Alu -18 295 1 3434 231 56 27 chr2 36982981 36983119 -216273464 + L1MEc LINE L1 3420 3552 -2663 2228 171 15 6 chr2 36983142 36983679 -216272904 - L1MA9 LINE L1 -623 5689 5149 2359 165 57 90 chr2 36983682 36984317 -216272266 + L1MA9 LINE L1 5664 6277 -35 1444 237 65 40 chr2 36984355 36984928 -216271655 + L1MEc LINE L1 3599 4185 -2030 457 323 76 31 chr2 36985123 36985411 -216271172 - L1M4 LINE L1 -3642 3923 3623 393 268 121 13 chr2 36985757 36985914 -216270669 - MIR3 SINE MIR -15 193 20 307 113 32 0 chr2 36987616 36987678 -216268905 + (CA)n Simple_repeat Simple_repeat 2 65 0 426 231 77 54 chr2 36988069 36988290 -216268293 - HAL1 LINE L1 -1035 1472 1247 1611 124 8 24 chr2 36989147 36989396 -216267187 - THE1C LTR MaLR -130 245 1 4289 203 33 11 chr2 36989396 36991155 -216265428 - L1M4 LINE L1 -5651 1914 15 21 36 0 0 chr2 36991162 36991190 -216265393 + AT_rich Low_complexity Low_complexity 1 28 0 272 243 40 0 chr2 36991357 36991431 -216265152 + LTR67 LTR ERVL 399 475 -82 781 228 63 0 chr2 36993139 36993376 -216263207 - MER20B DNA MER1_type -7 776 525 841 285 19 0 chr2 36993545 36993759 -216262824 - MIR SINE MIR -22 240 23 181 319 0 28 chr2 36993777 36993849 -216262734 + MER5A DNA MER1_type 67 136 -53 372 123 0 0 chr2 36994543 36994616 -216261967 + (TTAG)n Simple_repeat Simple_repeat 1 73 0 236 135 0 0 chr2 36994622 36994659 -216261924 - Charlie8 DNA MER1_type -2264 153 117 512 222 105 0 chr2 36994947 36995100 -216261483 - MER20B DNA MER1_type -7 776 608 233 329 77 45 chr2 36995285 36995440 -216261143 + MIR SINE MIR 49 208 -54 181 153 17 153 chr2 36995532 36995558 -216261025 + MIR3 SINE MIR 135 150 -58 1188 200 62 0 chr2 36995558 36995863 -216260720 - MER33 DNA MER1_type 0 324 1 181 153 17 153 chr2 36995863 36995895 -216260688 + MIR3 SINE MIR 150 185 -23 1543 176 45 4 chr2 36998103 36998261 -216258322 - AluJb SINE Alu -21 291 116 279 104 0 0 chr2 36998261 36998309 -216258274 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1543 176 45 4 chr2 36998309 36998417 -216258166 - AluJb SINE Alu -196 116 14 21 71 0 0 chr2 36998734 36998776 -216257807 + AT_rich Low_complexity Low_complexity 1 42 0 632 344 181 35 chr2 36998785 37000160 -216256423 + L2 LINE L2 1686 3259 -54 559 264 78 84 chr2 37001311 37001645 -216254938 + MLT1I LTR MaLR 60 391 -18 2842 161 25 69 chr2 37002045 37002685 -216253898 + LTR9 LTR ERV1 1 612 0 20659 165 37 10 chr2 37004130 37009978 -216246605 - L1MA3 LINE L1 0 7724 1620 420 37 0 0 chr2 37009978 37010032 -216246551 + (TG)n Simple_repeat Simple_repeat 2 55 0 20659 165 37 10 chr2 37010032 37011685 -216244898 - L1MA3 LINE L1 -6104 1620 13 314 316 65 24 chr2 37012089 37012257 -216244326 - L1ME3A LINE L1 -8 6231 6057 1002 269 112 15 chr2 37012340 37012815 -216243768 - L1ME3A LINE L1 -202 6029 5509 1129 286 63 27 chr2 37012965 37013658 -216242925 - L1ME3A LINE L1 -2105 4110 3393 1257 289 79 37 chr2 37013783 37014712 -216241871 - L1MEc LINE L1 -3135 3080 2143 2229 233 104 46 chr2 37014717 37015344 -216241239 - MLT2F LTR ERVL 0 663 1 272 313 45 0 chr2 37015609 37015743 -216240840 - L1MEc LINE L1 -4596 1800 1661 39527 66 14 2 chr2 37015975 37022079 -216234504 - L1PA5 LINE L1 -2 6152 2 233 270 66 57 chr2 37022110 37022321 -216234262 - L1MEc LINE L1 -4935 1270 1058 306 312 89 25 chr2 37023109 37023266 -216233317 - L1MEc LINE L1 -5950 255 89 564 268 6 4 chr2 37023508 37023690 -216232893 - MIR SINE MIR -1 261 5 403 307 24 31 chr2 37023677 37023804 -216232779 + L2 LINE L2 3147 3272 0 * 346 174 28 7 chr2 37024063 37024207 -216232376 + (TA)n Simple_repeat Simple_repeat 1 147 0 356 304 193 0 chr2 37024218 37024389 -216232194 - MIR SINE MIR 0 262 59 226 311 159 26 chr2 37024880 37025031 -216231552 - L2 LINE L2 -205 3067 2897 1064 199 100 33 chr2 37025512 37025783 -216230800 + AluJo SINE Alu 17 305 -7 194 261 46 46 chr2 37028983 37029048 -216227535 - L2 LINE L2 -57 3256 3192 269 247 62 52 chr2 37029287 37029384 -216227199 - MER58B DNA MER1_type 0 341 244 326 215 51 13 chr2 37030131 37030210 -216226373 - L2 LINE L2 -40 3273 3192 660 337 21 33 chr2 37030426 37030669 -216225914 + MIR SINE MIR 8 247 -15 2253 72 41 0 chr2 37031076 37031366 -216225217 - AluSp SINE Alu -11 302 1 311 273 129 22 chr2 37031788 37031927 -216224656 - MIR SINE MIR -39 223 70 26 30 0 0 chr2 37031977 37032010 -216224573 + AT_rich Low_complexity Low_complexity 1 33 0 702 244 82 7 chr2 37032529 37032771 -216223812 - LTR16A LTR ERVL 0 453 98 614 139 24 0 chr2 37032772 37032937 -216223646 + (TA)n Simple_repeat Simple_repeat 2 170 0 216 167 0 0 chr2 37032948 37032996 -216223587 + (TA)n Simple_repeat Simple_repeat 2 49 0 1816 229 68 38 chr2 37032996 37033495 -216223088 - MLT2B3 LTR ERVL -40 514 1 1873 334 58 67 chr2 37033787 37034767 -216221816 - HERV16 LTR ERVL -384 5380 4393 2125 63 46 14 chr2 37034767 37035051 -216221532 + AluY SINE Alu 1 293 -18 321 26 0 0 chr2 37035051 37035089 -216221494 + (GGAA)n Simple_repeat Simple_repeat 2 39 0 1873 334 58 67 chr2 37035089 37036046 -216220537 - HERV16 LTR ERVL -1370 4394 3459 1930 121 67 25 chr2 37036046 37036402 -216220181 + THE1C LTR MaLR 1 371 -4 1873 334 58 67 chr2 37036402 37036642 -216219941 - HERV16 LTR ERVL -2305 3459 3219 2232 286 43 33 chr2 37036661 37037702 -216218881 - HERV16 LTR ERVL -3579 1417 330 1684 268 12 14 chr2 37037767 37038193 -216218390 - LTR16A LTR ERVL 0 450 26 407 296 50 45 chr2 37038787 37039007 -216217576 + MLT1L LTR MaLR 1 221 -394 1789 175 0 0 chr2 37040038 37040351 -216216232 + AluJb SINE Alu 3 315 0 211 37 0 0 chr2 37040324 37040386 -216216197 + (CAA)n Simple_repeat Simple_repeat 1 62 0 377 232 148 32 chr2 37040923 37041078 -216215505 - MER112 DNA MER1_type -86 174 2 221 312 43 32 chr2 37041384 37041477 -216215106 + MIR SINE MIR 54 147 -115 499 238 8 16 chr2 37043378 37043500 -216213083 - LTR28 LTR ERV1 -4 1016 896 1481 218 96 77 chr2 37043707 37044353 -216212230 - LTR1B LTR ERV1 -168 658 1 2612 241 47 12 chr2 37044878 37045645 -216210938 - L1MC4a LINE L1 -1 7807 7014 1059 138 0 6 chr2 37045791 37045951 -216210632 - AluSg/x SINE Alu -5 307 149 5999 47 5 0 chr2 37045951 37046697 -216209886 - L1PA5 LINE L1 -1517 4629 3880 6332 38 6 0 chr2 37046698 37048066 -216208517 + L1PA5 LINE L1 4645 6017 -137 644 236 11 22 chr2 37048067 37048249 -216208334 - L1M4 LINE L1 -785 5361 5182 1264 132 44 0 chr2 37048324 37048551 -216208032 + L1MA4 LINE L1 6014 6250 -50 1125 142 44 35 chr2 37049245 37049471 -216207112 + L1PA16 LINE L1 5939 6166 0 828 295 78 21 chr2 37049927 37050329 -216206254 + MLT1K LTR MaLR 142 587 -1 225 0 0 0 chr2 37050785 37050810 -216205773 + (T)n Simple_repeat Simple_repeat 1 25 0 1281 244 79 104 chr2 37051043 37052386 -216204197 + L1MC5 LINE L1 6611 7901 -60 2068 141 36 33 chr2 37052486 37052849 -216203734 + THE1B LTR MaLR 1 364 0 1541 262 95 64 chr2 37052881 37053247 -216203336 + L2 LINE L2 2410 2763 -550 1535 194 24 10 chr2 37053247 37053535 -216203048 - AluSx SINE Alu -20 292 1 1541 262 95 64 chr2 37053535 37053583 -216203000 + L2 LINE L2 2763 2808 -505 1514 143 10 108 chr2 37053583 37053897 -216202686 + AluSx SINE Alu 15 297 -15 1541 262 95 64 chr2 37053897 37054361 -216202222 + L2 LINE L2 2808 3313 0 207 0 0 0 chr2 37054469 37054492 -216202091 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 184 311 189 0 chr2 37054498 37054572 -216202011 - L2 LINE L2 -17 3255 3168 273 339 64 0 chr2 37057142 37057251 -216199332 - MIR SINE MIR -35 227 112 716 303 84 13 chr2 37059184 37059494 -216197089 - L1MEd LINE L1 -5769 350 19 24 53 0 0 chr2 37059728 37059766 -216196817 + AT_rich Low_complexity Low_complexity 1 38 0 2510 53 0 3 chr2 37060264 37060568 -216196015 + AluY SINE Alu 1 303 -8 375 266 110 12 chr2 37061602 37061776 -216194807 + L1MC1 LINE L1 5584 5776 -345 437 232 91 0 chr2 37062189 37062288 -216194295 - MER5A DNA MER1_type -80 109 2 23 0 0 0 chr2 37062512 37062535 -216194048 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr2 37062828 37062860 -216193723 + AT_rich Low_complexity Low_complexity 1 32 0 452 302 110 16 chr2 37064230 37064412 -216192171 - MIR SINE MIR -16 246 48 25 0 0 0 chr2 37064571 37064596 -216191987 + AT_rich Low_complexity Low_complexity 1 25 0 1893 147 4 0 chr2 37064856 37065135 -216191448 - AluSx SINE Alu -30 282 3 240 290 61 69 chr2 37065300 37065431 -216191152 - L2 LINE L2 0 3313 3184 578 234 66 62 chr2 37067096 37067323 -216189260 - L1MC4 LINE L1 -4 8038 7811 1007 261 60 55 chr2 37067364 37067515 -216189068 - L1MC4 LINE L1 -317 7725 7576 2015 134 17 0 chr2 37067515 37067813 -216188770 - AluSx SINE Alu -9 303 1 411 155 8 4 chr2 37067813 37067842 -216188741 - Alu SINE Alu -308 0 1 1007 261 60 55 chr2 37067842 37068247 -216188336 - L1MC4 LINE L1 -495 7547 7137 657 193 6 0 chr2 37068535 37068671 -216187912 + L1MC1 LINE L1 5833 5970 -196 1443 248 137 50 chr2 37069415 37069940 -216186643 + MLT1E2 LTR MaLR 56 626 0 1641 223 25 11 chr2 37070496 37070860 -216185723 - MLT1A2 LTR MaLR -5 369 1 1067 226 68 77 chr2 37071246 37071586 -216184997 - MER58B DNA MER1_type -4 337 1 232 305 125 51 chr2 37072264 37072490 -216184093 + MIR SINE MIR 16 254 -8 292 296 124 12 chr2 37073195 37073364 -216183219 - MIR3 SINE MIR -6 202 15 658 271 12 12 chr2 37075311 37075477 -216181106 + MER5B DNA MER1_type 13 178 0 180 282 90 39 chr2 37075734 37075812 -216180771 + L2 LINE L2 3160 3241 -31 450 286 121 22 chr2 37076834 37077065 -216179518 - MLT1K LTR MaLR 0 588 335 773 249 58 5 chr2 37077289 37077478 -216179105 + MER58A DNA MER1_type 26 224 0 5279 86 1 1 chr2 37077729 37078448 -216178135 - L1PA8 LINE L1 0 6172 5454 2152 128 0 0 chr2 37080379 37080677 -216175906 - AluSx SINE Alu -12 300 3 540 104 65 5 chr2 37080748 37081134 -216175449 + (TA)n Simple_repeat Simple_repeat 1 409 0 27 62 0 0 chr2 37081135 37081183 -216175400 + AT_rich Low_complexity Low_complexity 1 48 0 607 35 71 29 chr2 37081184 37081354 -216175229 + (TA)n Simple_repeat Simple_repeat 1 177 0 630 133 45 0 chr2 37081456 37081769 -216174814 + (TA)n Simple_repeat Simple_repeat 1 327 0 37 39 0 0 chr2 37081769 37081820 -216174763 + AT_rich Low_complexity Low_complexity 1 51 0 294 29 0 0 chr2 37081948 37081983 -216174600 + (TG)n Simple_repeat Simple_repeat 1 35 0 1192 219 46 40 chr2 37082200 37082395 -216174188 - MER110A LTR ERV1 -70 398 199 2092 92 6 57 chr2 37082395 37082711 -216173872 - AluY SINE Alu -11 300 1 1192 219 46 40 chr2 37082711 37082840 -216173743 - MER110A LTR ERV1 -269 199 72 494 299 69 6 chr2 37082859 37083033 -216173550 + MIR SINE MIR 72 256 -6 26 30 0 0 chr2 37083399 37083432 -216173151 + AT_rich Low_complexity Low_complexity 1 33 0 1581 219 35 41 chr2 37083498 37083955 -216172628 + MER89 LTR ERV1 7 559 0 242 274 0 55 chr2 37084797 37084870 -216171713 + L2 LINE L2 3201 3269 -3 2524 191 123 62 chr2 37084964 37085742 -216170841 - LTR1B LTR ERV1 0 826 1 1803 107 4 29 chr2 37088155 37088436 -216168147 + AluSq SINE Alu 1 274 -39 21 0 0 0 chr2 37089434 37089455 -216167128 + AT_rich Low_complexity Low_complexity 1 21 0 1424 197 20 58 chr2 37089575 37089943 -216166640 + MLT2B1 LTR ERVL 1 355 -59 191 139 70 0 chr2 37089944 37089987 -216166596 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 333 0 0 0 chr2 37090025 37090062 -216166521 + (TG)n Simple_repeat Simple_repeat 2 38 0 1578 164 17 17 chr2 37090150 37090437 -216166146 - AluJo SINE Alu -25 287 1 990 310 58 6 chr2 37090437 37090802 -216165781 + L2 LINE L2 2193 2576 -738 890 144 41 0 chr2 37090902 37091048 -216165535 - LTR47B LTR ERVL -291 152 1 3311 193 111 38 chr2 37091086 37091389 -216165194 + Charlie1 DNA MER1_type 1704 1983 -778 261 0 0 0 chr2 37091389 37091418 -216165165 + (CTATA)n Simple_repeat Simple_repeat 5 33 0 3311 193 111 38 chr2 37091418 37092097 -216164486 + Charlie1 DNA MER1_type 1983 2758 -3 576 299 69 37 chr2 37092238 37092455 -216164128 + L2 LINE L2 2900 3123 -190 384 269 79 20 chr2 37092487 37092740 -216163843 - L1MC5 LINE L1 -65 7896 7629 471 248 80 20 chr2 37092816 37093043 -216163540 - L1ME LINE L1 -609 5949 5711 962 248 90 6 chr2 37093059 37093402 -216163181 - L1ME LINE L1 -898 5642 5271 * 1341 260 79 49 chr2 37093400 37093996 -216162587 + L1MC4 LINE L1 7427 8040 -2 298 306 65 22 chr2 37094073 37094302 -216162281 + L1ME LINE L1 5564 5802 -319 363 221 36 0 chr2 37095152 37095279 -216161304 - L1MEc LINE L1 -3907 2637 2501 968 233 8 25 chr2 37095279 37095519 -216161064 + MLT1A1 LTR MaLR 1 236 -129 1028 313 73 22 chr2 37095940 37096991 -216159592 - L1ME3A LINE L1 -279 5891 4791 586 264 46 35 chr2 37097591 37097896 -216158687 - LTR16A1 LTR ERVL 0 457 172 39 68 0 0 chr2 37097983 37098057 -216158526 + AT_rich Low_complexity Low_complexity 1 74 0 288 0 0 0 chr2 37098531 37098563 -216158020 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 351 0 0 0 chr2 37098562 37098601 -216157982 + (CA)n Simple_repeat Simple_repeat 2 40 0 35 0 0 0 chr2 37098833 37098868 -216157715 + AT_rich Low_complexity Low_complexity 1 35 0 831 74 16 8 chr2 37098868 37098990 -216157593 - L1P LINE L1 -1866 4280 4158 279 0 0 0 chr2 37099303 37099316 -216157267 + (TG)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr2 37099316 37099347 -216157236 + (TG)n Simple_repeat Simple_repeat 2 32 0 191 246 58 29 chr2 37099510 37099579 -216157004 - L2 LINE L2 -554 2760 2690 1019 340 83 18 chr2 37099735 37100362 -216156221 - L2 LINE L2 -864 2450 1783 206 352 25 37 chr2 37100613 37100775 -216155808 + L2 LINE L2 2894 3053 -219 23 0 0 0 chr2 37102170 37102193 -216154390 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr2 37102642 37102670 -216153913 + AT_rich Low_complexity Low_complexity 1 28 0 731 251 38 47 chr2 37102943 37103178 -216153405 + MIR SINE MIR 8 240 -22 192 77 0 0 chr2 37103184 37103210 -216153373 + (ATG)n Simple_repeat Simple_repeat 2 27 0 951 309 51 45 chr2 37103359 37103955 -216152628 + L2 LINE L2 2429 3028 -285 840 177 57 6 chr2 37103956 37104131 -216152452 + MER53 DNA DNA 1 184 -5 498 337 96 11 chr2 37104141 37104402 -216152181 + L2 LINE L2 3028 3310 -3 347 291 7 93 chr2 37104793 37104944 -216151639 + L2 LINE L2 3175 3312 -1 1027 278 82 56 chr2 37105756 37106508 -216150075 + HAL1 LINE L1 875 1646 -861 239 305 219 13 chr2 37106539 37106690 -216149893 + HAL1 LINE L1 1728 1909 -598 221 209 15 0 chr2 37106750 37106817 -216149766 + GA-rich Low_complexity Low_complexity 1 68 0 313 276 47 16 chr2 37107618 37107745 -216148838 - MIR SINE MIR -67 195 65 4632 179 50 34 chr2 37107793 37109594 -216146989 + L1MB7 LINE L1 4212 6054 -130 2105 107 0 32 chr2 37109594 37109904 -216146679 + AluSq SINE Alu 1 300 -13 4632 179 50 34 chr2 37109904 37110014 -216146569 + L1MB7 LINE L1 6054 6161 -23 184 71 36 0 chr2 37110494 37110522 -216146061 - MER5B DNA MER1_type -138 40 12 183 323 109 52 chr2 37110905 37111097 -216145486 - MIR SINE MIR -29 233 31 2707 120 26 0 chr2 37111981 37112398 -216144185 - MSTA LTR MaLR 0 428 1 214 301 14 27 chr2 37112501 37112574 -216144009 + MER5A DNA MER1_type 7 78 -111 814 167 0 53 chr2 37112583 37112733 -216143850 + FRAM SINE Alu 11 152 -24 375 41 0 0 chr2 37112746 37112795 -216143788 + (CA)n Simple_repeat Simple_repeat 2 50 0 704 321 5 9 chr2 37113873 37114088 -216142495 - MIR SINE MIR -29 233 20 621 264 54 91 chr2 37114282 37114388 -216142195 - MLT1L LTR MaLR -224 391 283 2532 63 3 0 chr2 37114388 37114690 -216141893 - AluSp SINE Alu -8 305 3 621 264 54 91 chr2 37114690 37114989 -216141594 - MLT1L LTR MaLR -332 283 1 1997 139 0 0 chr2 37115150 37115457 -216141126 - AluSx SINE Alu 0 310 4 283 311 49 25 chr2 37116250 37116372 -216140211 - MIR3 SINE MIR -3 205 81 28 0 0 0 chr2 37117579 37117607 -216138976 + AT_rich Low_complexity Low_complexity 1 28 0 309 265 70 30 chr2 37117835 37117979 -216138604 - L1MC/D LINE L1 -925 5434 5287 23 54 0 0 chr2 37118284 37118321 -216138262 + AT_rich Low_complexity Low_complexity 1 37 0 1299 271 121 13 chr2 37118593 37119055 -216137528 + LTR33 LTR ERVL 8 519 -2 394 316 134 40 chr2 37119087 37119921 -216136662 - L1MC/D LINE L1 -1533 4613 3692 390 313 94 26 chr2 37120617 37121000 -216135583 - HAL1 LINE L1 -938 1569 1161 501 17 0 0 chr2 37122797 37122855 -216133728 + (TG)n Simple_repeat Simple_repeat 1 58 0 463 119 71 0 chr2 37123165 37123249 -216133334 + MER53 DNA DNA 94 183 -6 408 300 101 77 chr2 37125473 37125720 -216130863 + MIR SINE MIR 9 261 -1 199 248 148 101 chr2 37128447 37128549 -216128034 + MER5B DNA MER1_type 21 134 -44 1461 193 66 7 chr2 37128549 37128823 -216127760 - AluJo SINE Alu -22 290 1 199 248 148 101 chr2 37128823 37128869 -216127714 + MER5B DNA MER1_type 134 176 -2 1286 124 38 61 chr2 37128887 37129159 -216127424 + Tigger4(Zombi) DNA MER2_type 1 2731 0 1311 212 96 79 chr2 37129988 37130101 -216126482 - MLT1D LTR MaLR 0 626 516 2042 153 0 0 chr2 37130101 37130408 -216126175 + AluSg SINE Alu 3 309 -1 1311 212 96 79 chr2 37130408 37130880 -216125703 - MLT1D LTR MaLR -110 516 13 1018 67 0 0 chr2 37131398 37131533 -216125050 + L1PA7 LINE L1 6020 6154 0 392 352 49 16 chr2 37131706 37132152 -216124431 + L1ME LINE L1 5354 5814 -307 6793 131 36 20 chr2 37132422 37133584 -216122999 - L1P LINE L1 -3281 2865 1685 1618 156 58 35 chr2 37133686 37134033 -216122550 - LTR49-int LTR ERV1 -689 5642 5288 381 312 54 40 chr2 37134134 37134376 -216122207 - L2 LINE L2 -281 3032 2787 355 250 33 22 chr2 37134536 37134628 -216121955 - MIR SINE MIR -157 105 13 21 0 0 0 chr2 37134941 37134962 -216121621 + AT_rich Low_complexity Low_complexity 1 21 0 1517 169 38 35 chr2 37135641 37135827 -216120756 + Charlie5 DNA MER1_type 2248 2432 -192 1498 208 0 14 chr2 37135827 37136116 -216120467 + AluJo SINE Alu 28 312 0 1517 169 38 35 chr2 37136116 37136301 -216120282 + Charlie5 DNA MER1_type 2432 2620 -4 311 345 72 72 chr2 37138151 37138667 -216117916 + L2 LINE L2 2258 2773 -541 28 0 0 0 chr2 37140661 37140689 -216115894 + AT_rich Low_complexity Low_complexity 1 28 0 2284 107 0 0 chr2 37141049 37141348 -216115235 + AluSc SINE Alu 1 299 -10 257 304 0 0 chr2 37141594 37141663 -216114920 - L2 LINE L2 -3 3310 3242 23 54 0 0 chr2 37141664 37141701 -216114882 + AT_rich Low_complexity Low_complexity 1 37 0 565 331 98 80 chr2 37142012 37142430 -216114153 - L2 LINE L2 -425 2889 2453 4659 173 16 13 chr2 37142430 37143332 -216113251 + L1MC2 LINE L1 5432 6335 -9 565 331 98 80 chr2 37143332 37143610 -216112973 - L2 LINE L2 -861 2453 2181 1102 56 0 28 chr2 37143932 37144076 -216112507 + AluSg SINE Alu 1 140 -170 7554 38 32 0 chr2 37144176 37145826 -216110757 + L1PA4 LINE L1 4467 6144 -11 22 35 0 0 chr2 37147577 37147606 -216108977 + AT_rich Low_complexity Low_complexity 1 29 0 2072 141 36 33 chr2 37148025 37148388 -216108195 - THE1B LTR MaLR 0 364 1 208 250 0 33 chr2 37148398 37148458 -216108125 - L2 LINE L2 -3 3269 3212 447 125 10 87 chr2 37148503 37148607 -216107976 + L1MA5A LINE L1 4363 4458 -1688 3294 159 18 5 chr2 37148708 37149660 -216106923 + L1MA5A LINE L1 4872 5835 -462 1811 166 20 3 chr2 37149883 37150178 -216106405 + AluJb SINE Alu 2 301 -11 220 196 87 0 chr2 37150628 37150674 -216105909 - MIR3 SINE MIR -26 182 133 369 300 45 0 chr2 37150946 37151056 -216105527 + MER96 DNA MER1_type? 61 175 0 203 267 13 27 chr2 37152044 37152119 -216104464 + CT-rich Low_complexity Low_complexity 1 74 0 384 291 109 6 chr2 37154326 37154491 -216102092 + L1ME4a LINE L1 5541 5722 -399 765 33 0 0 chr2 37154616 37154708 -216101875 + (TATATG)n Simple_repeat Simple_repeat 5 96 0 378 232 20 0 chr2 37154709 37154808 -216101775 + L1ME4a LINE L1 5986 6086 -35 207 0 0 0 chr2 37157228 37157251 -216099332 + (T)n Simple_repeat Simple_repeat 1 23 0 193 319 96 64 chr2 37157923 37158080 -216098503 + MIR SINE MIR 12 173 -89 201 241 0 69 chr2 37159434 37159550 -216097033 + A-rich Low_complexity Low_complexity 2 109 0 531 282 38 19 chr2 37160631 37160844 -216095739 - MIR SINE MIR -24 238 22 230 237 102 0 chr2 37160910 37160969 -216095614 + MLT1H1 LTR MaLR 71 135 -420 237 271 41 74 chr2 37161284 37161406 -216095177 + MLT1H LTR MaLR 428 545 -4 305 303 212 36 chr2 37162549 37162988 -216093595 + L2 LINE L2 2147 2668 -646 411 271 220 5 chr2 37162988 37163202 -216093381 - MIR SINE MIR 0 262 3 327 242 0 0 chr2 37163591 37163657 -216092926 + MIR SINE MIR 53 118 -144 317 286 54 81 chr2 37163826 37164011 -216092572 + MIR SINE MIR 57 236 -26 2125 225 60 13 chr2 37164113 37164708 -216091875 - L1MC4 LINE L1 -145 7897 7275 1146 214 108 35 chr2 37164750 37165147 -216091436 - L1MC4 LINE L1 -957 7085 6660 768 280 93 108 chr2 37165861 37166825 -216089758 + L2 LINE L2 1752 2701 -613 204 40 0 0 chr2 37166838 37166863 -216089720 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1976 138 0 0 chr2 37166865 37167141 -216089442 - AluSx SINE Alu -30 282 7 10014 147 21 31 chr2 37167172 37169915 -216086668 + L1P3 LINE L1 217 2952 -3509 3401 105 13 47 chr2 37170015 37170657 -216085926 + L1PA8 LINE L1 5563 6185 0 205 342 81 18 chr2 37170658 37170769 -216085814 + L2 LINE L2 2703 2820 -494 542 355 63 31 chr2 37170865 37171183 -216085400 + L2 LINE L2 2945 3272 0 455 267 164 35 chr2 37171304 37171536 -216085047 + MIR SINE MIR 1 262 0 37171 39 4 2 chr2 37172269 37177801 -216078782 + L1PA3 LINE L1 606 6147 -8 30 0 0 0 chr2 37177801 37177831 -216078752 + AT_rich Low_complexity Low_complexity 1 30 0 520 234 117 51 chr2 37178337 37178534 -216078049 + MIR SINE MIR 47 256 -6 455 346 41 1 chr2 37178673 37178842 -216077741 + MIR SINE MIR 37 210 -52 2028 133 0 41 chr2 37178953 37179270 -216077313 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr2 37179382 37179403 -216077180 + AT_rich Low_complexity Low_complexity 1 21 0 220 377 36 22 chr2 37179855 37179993 -216076590 + MIR3 SINE MIR 6 145 -63 12475 40 2 0 chr2 37180002 37181609 -216074974 - L1P LINE L1 -3220 2926 1317 12097 18 10 7 chr2 37181610 37183776 -216072807 + L1PA4 LINE L1 3987 6155 0 360 371 11 6 chr2 37183928 37184103 -216072480 - MIR SINE MIR -5 257 82 5843 141 20 15 chr2 37184739 37185884 -216070699 - L1MA4A LINE L1 -6 6297 5144 222 164 0 36 chr2 37186488 37186543 -216070040 + CT-rich Low_complexity Low_complexity 4 56 0 348 299 24 0 chr2 37187028 37187155 -216069428 + L1ME4a LINE L1 5740 5869 -252 4916 12 2 2 chr2 37187176 37187766 -216068817 - L1HS LINE L1 0 6155 5566 5754 120 25 10 chr2 37187866 37188875 -216067708 + L1P LINE L1 2636 3659 -2487 4816 117 141 24 chr2 37188877 37189952 -216066631 + pTR5 LTR ERV1 743 2032 -406 316 220 11 0 chr2 37189952 37190043 -216066540 + LTR30 LTR ERV1 551 642 -80 1429 111 0 18 chr2 37190046 37190271 -216066312 + pTR5 LTR ERV1 172 392 -2046 11169 108 4 2 chr2 37190274 37192052 -216064531 + L1P3 LINE L1 3661 5440 -732 344 289 0 0 chr2 37192186 37192276 -216064307 + L1MC4 LINE L1 6614 6703 -1339 336 249 0 0 chr2 37192276 37192441 -216064142 + (TA)n Simple_repeat Simple_repeat 2 166 0 345 249 0 0 chr2 37192456 37192633 -216063950 + (TA)n Simple_repeat Simple_repeat 1 177 0 387 257 0 0 chr2 37192648 37193173 -216063410 + (TA)n Simple_repeat Simple_repeat 1 525 0 294 266 0 0 chr2 37193188 37193365 -216063218 + (TA)n Simple_repeat Simple_repeat 1 177 0 387 264 0 0 chr2 37193380 37193729 -216062854 + (TA)n Simple_repeat Simple_repeat 1 349 0 207 256 0 0 chr2 37193740 37193857 -216062726 + (TA)n Simple_repeat Simple_repeat 2 118 0 387 237 0 0 chr2 37193904 37194081 -216062502 + (TA)n Simple_repeat Simple_repeat 1 177 0 7380 28 2 2 chr2 37195390 37196957 -216059626 - L1PA4 LINE L1 -11 6144 4568 26545 40 2 1 chr2 37197057 37200856 -216055727 - L1P2 LINE L1 -401 5754 1955 323 300 54 46 chr2 37201974 37202104 -216054479 - L2 LINE L2 0 3313 3183 302 277 0 92 chr2 37202290 37202431 -216054152 - L1MEd LINE L1 -5130 989 862 488 330 104 56 chr2 37202510 37202904 -216053679 - L1MEd LINE L1 -5386 733 321 345 342 99 26 chr2 37202904 37203208 -216053375 + L2 LINE L2 2947 3272 -41 231 222 0 0 chr2 37203637 37203691 -216052892 + A-rich Low_complexity Low_complexity 1 54 0 298 175 120 66 chr2 37205767 37205894 -216050689 - MIR SINE MIR -83 179 39 345 24 0 0 chr2 37206188 37206230 -216050353 + (CA)n Simple_repeat Simple_repeat 1 42 0 437 189 11 0 chr2 37206259 37206354 -216050229 + CT-rich Low_complexity Low_complexity 2 97 0 841 75 5 54 chr2 37206358 37206544 -216050039 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 273 256 15 15 chr2 37206546 37206683 -216049900 + CT-rich Low_complexity Low_complexity 4 140 0 3095 58 20 0 chr2 37206889 37207331 -216049252 + L1PA7 LINE L1 5738 6187 0 183 80 0 0 chr2 37208490 37208515 -216048068 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 891 214 51 19 chr2 37210797 37211012 -216045571 + L1PA13 LINE L1 54 275 -6564 3388 235 27 24 chr2 37211018 37212071 -216044512 + L1PA13 LINE L1 1668 2723 -4126 5554 121 12 18 chr2 37212096 37213442 -216043141 + L1PA15 LINE L1 4823 6164 -1 665 263 11 5 chr2 37213825 37214011 -216042572 - MLT1A2 LTR MaLR -19 355 169 186 43 0 0 chr2 37214015 37214038 -216042545 + (TTC)n Simple_repeat Simple_repeat 1 23 0 523 174 9 35 chr2 37214038 37214153 -216042430 - MLT1A2 LTR MaLR -254 120 9 2071 128 60 23 chr2 37214454 37214805 -216041778 + THE1B LTR MaLR 1 364 0 180 358 0 12 chr2 37214853 37214934 -216041649 + L2 LINE L2 3234 3313 0 753 190 50 0 chr2 37214940 37215140 -216041443 - L1MC3 LINE L1 -1 7784 7575 747 153 117 0 chr2 37215155 37215286 -216041297 - L1MA9 LINE L1 -10 6302 6147 396 0 0 0 chr2 37215286 37215330 -216041253 + (TG)n Simple_repeat Simple_repeat 1 44 0 747 153 117 0 chr2 37215330 37215361 -216041222 - L1MA9 LINE L1 -165 6147 6121 624 160 0 46 chr2 37215401 37215532 -216041051 + L1MA9 LINE L1 6004 6128 -184 1990 129 3 7 chr2 37215542 37215837 -216040746 - AluSg SINE Alu -16 294 1 2964 178 16 16 chr2 37215838 37216477 -216040106 - L1MC3 LINE L1 -199 7586 6948 316 244 23 35 chr2 37216691 37216777 -216039806 - MIR3 SINE MIR -15 193 109 358 332 207 26 chr2 37216980 37217642 -216038941 - L2 LINE L2 -601 2713 1932 2087 125 0 26 chr2 37220273 37220584 -216035999 - AluSx SINE Alu -3 309 7 509 148 0 10 chr2 37221541 37221642 -216034941 + (TTCC)n Simple_repeat Simple_repeat 3 102 0 271 310 23 0 chr2 37222051 37222138 -216034445 - MIR SINE MIR -65 197 109 7280 201 77 76 chr2 37223177 37225135 -216031448 + L1MC3 LINE L1 5169 7217 -568 266 264 11 22 chr2 37225135 37225226 -216031357 + MLT1F1 LTR MaLR 35 124 -443 7280 201 77 76 chr2 37225226 37225796 -216030787 + L1MC3 LINE L1 7217 7785 0 2866 133 2 0 chr2 37226049 37226484 -216030099 - L1PA16 LINE L1 -17 6149 5714 21 0 0 0 chr2 37227023 37227044 -216029539 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr2 37227792 37227835 -216028748 + AT_rich Low_complexity Low_complexity 1 43 0 658 286 16 22 chr2 37228725 37228910 -216027673 - MIR SINE MIR -42 220 37 248 225 0 0 chr2 37228987 37229058 -216027525 + A-rich Low_complexity Low_complexity 3 73 0 452 247 224 12 chr2 37229411 37229581 -216027002 - L2 LINE L2 -5 3308 3103 1996 188 56 34 chr2 37229581 37230049 -216026534 + MLT2B1 LTR ERVL 1 478 -42 210 191 0 0 chr2 37230049 37230096 -216026487 + (CCTA)n Simple_repeat Simple_repeat 1 47 0 515 67 27 0 chr2 37230102 37230177 -216026406 + (TCCA)n Simple_repeat Simple_repeat 4 80 0 1399 191 66 0 chr2 37230224 37230480 -216026103 + AluJo SINE Alu 1 273 -39 453 19 0 0 chr2 37230488 37230542 -216026041 + (CA)n Simple_repeat Simple_repeat 1 54 0 2041 265 80 52 chr2 37230603 37231517 -216025066 - L2 LINE L2 -870 2444 1506 342 244 267 15 chr2 37232044 37232179 -216024404 + MIR3 SINE MIR 16 184 -24 26 0 0 0 chr2 37232751 37232777 -216023806 + AT_rich Low_complexity Low_complexity 1 26 0 754 297 26 0 chr2 37233108 37233303 -216023280 + MIR SINE MIR 59 258 -4 249 33 0 0 chr2 37233326 37233356 -216023227 + (ATG)n Simple_repeat Simple_repeat 3 32 0 559 297 66 15 chr2 37233446 37233719 -216022864 - MER102b DNA MER1_type -1 340 54 3578 121 28 31 chr2 37233873 37234509 -216022074 + L1MA7 LINE L1 5656 6289 -2 748 244 21 4 chr2 37234512 37234746 -216021837 - L1M4 LINE L1 -3273 2873 2636 198 297 88 33 chr2 37235932 37236023 -216020560 + L2 LINE L2 3210 3305 -8 198 0 0 0 chr2 37236648 37236670 -216019913 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1213 163 10 5 chr2 37236888 37237084 -216019499 - AluJo SINE Alu -60 252 56 293 103 0 0 chr2 37237128 37237167 -216019416 - AluJo SINE Alu -252 51 13 329 260 81 49 chr2 37237940 37238063 -216018520 + MIR SINE MIR 16 142 -66 217 333 0 0 chr2 37238337 37238400 -216018183 + CT-rich Low_complexity Low_complexity 4 66 0 2162 104 0 13 chr2 37238540 37238838 -216017745 - AluSq SINE Alu -17 296 3 2629 128 34 18 chr2 37238857 37239357 -216017226 - L1MA4 LINE L1 -6 6294 5787 1152 189 24 12 chr2 37239368 37239616 -216016967 - MLT1A1 LTR MaLR -112 253 3 311 234 47 55 chr2 37239616 37239744 -216016839 - L1MEd LINE L1 -3201 3740 3614 915 196 0 0 chr2 37239744 37239902 -216016681 - AluJb SINE Alu -11 301 144 1046 286 77 19 chr2 37239903 37240259 -216016324 - L1MEd LINE L1 -3320 3621 3287 2343 112 0 0 chr2 37240259 37240555 -216016028 - AluSq SINE Alu -17 296 1 1046 286 77 19 chr2 37240555 37240876 -216015707 - L1MEd LINE L1 -3654 3287 2905 6787 126 54 19 chr2 37240890 37242079 -216014504 - Tigger3b DNA MER2_type 0 1231 1 192 77 0 0 chr2 37242239 37242265 -216014318 + (TATG)n Simple_repeat Simple_repeat 3 28 0 386 298 50 56 chr2 37242558 37243602 -216012981 - L1MEd LINE L1 -4679 2443 1373 2202 84 3 14 chr2 37244685 37244981 -216011602 - AluSg SINE Alu -17 293 1 507 323 44 13 chr2 37245295 37245524 -216011059 + L2 LINE L2 2174 2409 -905 1247 237 22 37 chr2 37245581 37245991 -216010592 - L1MC2 LINE L1 -9 6335 5932 40550 34 25 1 chr2 37246092 37251302 -216005281 - L1P LINE L1 -813 5333 1 307 246 189 0 chr2 37251324 37251446 -216005137 + L1ME4a LINE L1 5904 6048 -73 2376 221 58 39 chr2 37251773 37252551 -216004032 - L1MC4a LINE L1 -392 7416 6624 420 295 35 12 chr2 37253029 37253202 -216003381 - L1MEd LINE L1 -6224 199 23 6317 155 10 10 chr2 37253248 37254447 -216002136 - L1P LINE L1 -2546 3600 2402 983 179 167 58 chr2 37254460 37254790 -216001793 - LTR18B LTR ERVL -248 366 1 4585 259 62 13 chr2 37254790 37256234 -216000349 - L1PA12 LINE L1 -6063 1518 5 339 240 6 101 chr2 37257876 37258055 -215998528 - MER112 DNA MER1_type -6 254 93 280 333 74 39 chr2 37258804 37259062 -215997521 + L2 LINE L2 2709 2975 -339 297 285 215 0 chr2 37259458 37259583 -215997000 + MIR SINE MIR 105 258 0 498 122 0 24 chr2 37259583 37259665 -215996918 - MADE1 DNA Mariner 0 80 1 572 263 17 23 chr2 37260083 37260258 -215996325 + MIR3 SINE MIR 28 201 -7 808 279 184 2 chr2 37260318 37260730 -215995853 - LTR33 LTR ERVL -24 497 11 2314 75 6 43 chr2 37262155 37262477 -215994106 + AluSx SINE Alu 3 312 0 2305 99 7 0 chr2 37262664 37262967 -215993616 - AluY SINE Alu -6 305 1 436 265 66 30 chr2 37263837 37264003 -215992580 - MER20B DNA MER1_type -611 172 1 244 333 119 0 chr2 37264612 37264696 -215991887 + L2 LINE L2 3169 3262 -10 208 315 123 0 chr2 37265930 37266060 -215990523 + MIR SINE MIR 117 262 0 233 408 8 8 chr2 37266422 37266542 -215990041 + MIR SINE MIR 20 139 -123 472 127 13 0 chr2 37266712 37266791 -215989792 + MADE1 DNA Mariner 1 80 0 308 343 41 18 chr2 37266826 37266995 -215989588 + MIR3 SINE MIR 31 203 -5 2075 175 117 47 chr2 37267068 37267200 -215989383 - L1MD3 LINE L1 -10 7985 7864 2534 190 32 48 chr2 37267200 37267763 -215988820 + MLT2B3 LTR ERVL 1 554 0 2075 175 117 47 chr2 37267763 37268178 -215988405 - L1MD3 LINE L1 -131 7864 7400 440 204 11 0 chr2 37268180 37268273 -215988310 - MLT1F1 LTR MaLR -448 119 26 654 270 109 15 chr2 37268803 37269070 -215987513 + MLT1J2 LTR MaLR 155 446 -4 476 191 0 38 chr2 37269768 37269873 -215986710 + MLT1F1 LTR MaLR 24 124 -443 1407 129 4 9 chr2 37269878 37270103 -215986480 + L1MD3 LINE L1 7407 7630 -365 561 211 81 0 chr2 37271348 37271471 -215985112 + MER94 DNA DNA 2 134 0 181 250 0 0 chr2 37271592 37271632 -215984951 + MIR SINE MIR 1 40 -222 670 292 50 5 chr2 37271693 37271912 -215984671 + MIR SINE MIR 31 259 -3 300 284 84 52 chr2 37272823 37272978 -215983605 - MIR SINE MIR -7 255 96 2336 71 0 7 chr2 37273572 37273858 -215982725 + AluY SINE Alu 1 286 -25 225 0 0 0 chr2 37273858 37273883 -215982700 + (TTAAA)n Simple_repeat Simple_repeat 3 27 0 318 284 118 0 chr2 37273896 37274023 -215982560 - MIR SINE MIR -1 261 120 495 333 56 4 chr2 37274159 37274393 -215982190 - MIR SINE MIR -12 250 5 21 57 0 0 chr2 37274650 37274685 -215981898 + AT_rich Low_complexity Low_complexity 1 35 0 1571 223 17 11 chr2 37274775 37275134 -215981449 + MLT1A1 LTR MaLR 5 365 0 2492 88 23 0 chr2 37275193 37275544 -215981039 - L1PA11 LINE L1 0 6174 5816 511 320 87 55 chr2 37275661 37276256 -215980327 - L1MEd LINE L1 -987 1503 806 758 232 12 6 chr2 37276924 37277088 -215979495 + MER45A DNA AcHobo 7 171 -7 363 78 0 0 chr2 37277612 37277663 -215978920 + (TG)n Simple_repeat Simple_repeat 2 52 0 23 0 0 0 chr2 37277942 37277965 -215978618 + AT_rich Low_complexity Low_complexity 1 23 0 516 281 13 20 chr2 37278457 37278610 -215977973 - MIR SINE MIR -109 153 2 992 230 79 7 chr2 37278667 37278958 -215977625 - MLT1A1 LTR MaLR 0 365 54 199 326 146 0 chr2 37279158 37279247 -215977336 + L2 LINE L2 3204 3305 -8 1477 118 151 0 chr2 37279255 37279548 -215977035 - AluSx SINE Alu 0 330 1 244 310 70 0 chr2 37279561 37279632 -215976951 + MIR3 SINE MIR 85 160 -48 347 313 66 6 chr2 37279632 37279798 -215976785 - MER5B DNA MER1_type 0 178 3 194 234 0 43 chr2 37279803 37279850 -215976733 + MER5A DNA MER1_type 2 46 -143 363 287 47 16 chr2 37280926 37281055 -215975528 + MIR SINE MIR 56 188 -74 1253 181 15 5 chr2 37281077 37281282 -215975301 + AluJo SINE Alu 91 297 -15 2433 96 6 16 chr2 37281321 37281685 -215974898 - L1PB2 LINE L1 -9 6142 5783 1255 128 0 5 chr2 37281774 37281969 -215974614 - L1PA16 LINE L1 -9 6157 5964 597 221 97 41 chr2 37282084 37282279 -215974304 + MER63A DNA MER1_type 4 209 -1 364 283 54 73 chr2 37282474 37282679 -215973904 - MIR3 SINE MIR -7 201 1 4205 108 32 61 chr2 37282793 37283596 -215972987 + L1PA15 LINE L1 5386 6165 0 180 0 0 0 chr2 37283662 37283682 -215972901 + (T)n Simple_repeat Simple_repeat 1 20 0 27 29 0 0 chr2 37283885 37283919 -215972664 + AT_rich Low_complexity Low_complexity 1 34 0 2471 292 123 51 chr2 37283920 37285732 -215970851 - L2 LINE L2 -25 3288 1295 586 277 58 10 chr2 37285732 37285938 -215970645 - L2 LINE L2 -2552 762 547 216 184 0 0 chr2 37286027 37286076 -215970507 + (CA)n Simple_repeat Simple_repeat 2 50 0 201 266 32 82 chr2 37286545 37286557 -215970026 + L2 LINE L2 2163 2174 -1140 323 194 13 191 chr2 37286557 37286866 -215969717 - MER112 DNA MER1_type -2 254 1 201 266 32 82 chr2 37286866 37287011 -215969572 + L2 LINE L2 2174 2312 -1002 915 122 0 0 chr2 37287397 37287536 -215969047 - L1PA11 LINE L1 -1 6173 6035 195 293 17 0 chr2 37287618 37287676 -215968907 + L2 LINE L2 3212 3270 -2 320 241 78 78 chr2 37289102 37289218 -215967365 + MIR SINE MIR 1 116 -146 2255 120 0 0 chr2 37289267 37289568 -215967015 + AluSx SINE Alu 1 301 -11 282 233 27 14 chr2 37289587 37289660 -215966923 + L1MDa LINE L1 19 92 -6448 378 260 85 6 chr2 37289706 37289883 -215966700 + L1MB3 LINE L1 5121 5311 -835 1807 137 145 14 chr2 37289883 37290249 -215966334 - MSTA LTR MaLR 0 428 15 320 199 143 0 chr2 37290302 37290408 -215966175 + L1MD2 LINE L1 6194 7953 -42 21 0 0 0 chr2 37290446 37290467 -215966116 + AT_rich Low_complexity Low_complexity 1 21 0 313 272 54 0 chr2 37290480 37290572 -215966011 + MIR SINE MIR 140 236 -26 2171 169 44 108 chr2 37291122 37291733 -215964850 - L1MD3 LINE L1 -26 7969 7398 360 152 63 25 chr2 37291731 37291810 -215964773 - L1MC4 LINE L1 -1258 6784 6703 * 230 191 48 0 chr2 37291812 37291875 -215964708 + L1ME4a LINE L1 6025 6090 -31 514 194 24 8 chr2 37291886 37292010 -215964573 - MLT1D LTR MaLR -7 498 373 1207 115 6 17 chr2 37292012 37292186 -215964397 - AluSx SINE Alu -140 172 1 756 182 6 23 chr2 37292278 37292454 -215964129 + L1MA10 LINE L1 6160 6332 -2 432 264 114 33 chr2 37292963 37293236 -215963347 + L1MB3 LINE L1 5524 5818 -303 484 208 60 20 chr2 37293365 37293514 -215963069 + MER104 DNA Tc2 1 155 -25 449 286 94 79 chr2 37294453 37294932 -215961651 + MLT1J LTR MaLR 26 511 0 2522 73 0 0 chr2 37295093 37295395 -215961188 - AluSg SINE Alu -8 302 1 2424 88 0 0 chr2 37295917 37296213 -215960370 - AluSg SINE Alu -14 296 1 28 0 0 0 chr2 37297232 37297260 -215959323 + AT_rich Low_complexity Low_complexity 1 28 0 2272 88 14 0 chr2 37297713 37298010 -215958573 + AluY SINE Alu 1 301 -10 209 231 0 0 chr2 37298591 37298630 -215957953 + (TG)n Simple_repeat Simple_repeat 2 40 0 1423 169 24 14 chr2 37298649 37298945 -215957638 + L1MB3 LINE L1 5885 6183 0 196 331 49 25 chr2 37298998 37299161 -215957422 - L2 LINE L2 -534 2780 2614 333 42 21 0 chr2 37300031 37300079 -215956504 + L1PA3 LINE L1 6107 6155 0 183 42 0 0 chr2 37300138 37300162 -215956421 + (CA)n Simple_repeat Simple_repeat 1 24 0 239 240 40 30 chr2 37300429 37300529 -215956054 - L1ME LINE L1 -283 5881 5781 1873 135 14 27 chr2 37301360 37301656 -215954927 + AluJb SINE Alu 1 292 -20 920 244 54 27 chr2 37303169 37303464 -215953119 + L1ME1 LINE L1 5641 5943 -223 960 217 112 34 chr2 37303972 37304433 -215952150 + MLT1E LTR MaLR 1 593 0 347 344 96 0 chr2 37304983 37305108 -215951475 + L2 LINE L2 2920 3056 -257 207 322 34 42 chr2 37305252 37305370 -215951213 + L2 LINE L2 3196 3312 -1 195 175 75 0 chr2 37305417 37305457 -215951126 + MIR SINE MIR 33 75 -133 893 249 9 14 chr2 37307610 37307827 -215948756 + MER20B DNA MER1_type 4 219 0 378 272 44 4 chr2 37308248 37308403 -215948180 - MIR SINE MIR -34 228 4 344 339 9 9 chr2 37308776 37308888 -215947695 - L2 LINE L2 -1 3271 3160 2297 79 0 16 chr2 37309232 37309536 -215947047 + AluY SINE Alu 1 299 -12 8935 24 0 271 chr2 37312037 37313939 -215942644 + SVA Other Other 1 1386 0 254 88 0 0 chr2 37314046 37314080 -215942503 - MLT1C LTR MaLR 0 467 434 * 367 203 13 0 chr2 37314078 37314157 -215942426 - MLT1B LTR MaLR -277 113 34 529 322 23 0 chr2 37314421 37314595 -215941988 + MIR SINE MIR 14 191 -71 270 160 0 0 chr2 37314603 37314653 -215941930 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 192 40 0 0 chr2 37314653 37314678 -215941905 + (GA)n Simple_repeat Simple_repeat 2 26 0 * 375 195 0 0 chr2 37314677 37314800 -215941783 + (TA)n Simple_repeat Simple_repeat 2 124 0 317 284 23 0 chr2 37314805 37314893 -215941690 + L1MC4 LINE L1 6614 6703 -1339 183 100 0 0 chr2 37314900 37314930 -215941653 + (TA)n Simple_repeat Simple_repeat 1 30 0 301 222 0 16 chr2 37315060 37315123 -215941460 + L1MCa LINE L1 2006 2067 -4359 * 351 273 23 0 chr2 37315103 37315191 -215941392 + L1MC4 LINE L1 6614 6703 -1339 331 267 0 22 chr2 37315198 37315288 -215941295 + L1MC4 LINE L1 6615 6702 -1340 370 295 0 0 chr2 37315289 37315428 -215941155 + (TA)n Simple_repeat Simple_repeat 1 139 0 918 185 36 0 chr2 37316958 37317153 -215939430 - MER3 DNA MER1_type -7 202 1 374 330 144 5 chr2 37317564 37317752 -215938831 - MIR SINE MIR -26 236 23 24 0 0 0 chr2 37318574 37318598 -215937985 + AT_rich Low_complexity Low_complexity 1 24 0 285 226 16 0 chr2 37318881 37318943 -215937640 - Charlie8 DNA MER1_type 0 2417 2355 3514 247 70 5 chr2 37319218 37320146 -215936437 + L1M4b LINE L1 36 1023 -5836 300 130 3 32 chr2 37320153 37320234 -215936349 + L1MB7 LINE L1 5087 5165 -981 334 174 0 54 chr2 37320234 37320326 -215936257 + FLAM_A SINE Alu 47 133 0 2816 169 59 7 chr2 37320332 37321227 -215935356 + L1MB7 LINE L1 5164 6172 -12 1543 248 11 36 chr2 37321804 37322272 -215934311 + MLT2B1 LTR ERVL 1 456 -64 22 35 0 0 chr2 37322287 37322316 -215934267 + AT_rich Low_complexity Low_complexity 1 29 0 1139 108 76 16 chr2 37322886 37323071 -215933512 + L1PB1 LINE L1 5949 6144 -7 29 78 0 0 chr2 37323074 37323138 -215933445 + AT_rich Low_complexity Low_complexity 1 64 0 425 287 9 9 chr2 37323727 37323842 -215932741 + L3b LINE CR1 1111 1225 -358 282 336 53 15 chr2 37324035 37324166 -215932417 - L2 LINE L2 -13 3259 3124 324 333 50 35 chr2 37324445 37324586 -215931997 - MIR3 SINE MIR -60 148 6 267 31 0 0 chr2 37324700 37324732 -215931851 + (CA)n Simple_repeat Simple_repeat 1 32 0 27 0 0 0 chr2 37325104 37325131 -215931452 + AT_rich Low_complexity Low_complexity 1 27 0 907 253 54 74 chr2 37327164 37327419 -215929164 - MLT1I LTR MaLR -8 401 155 2357 102 0 0 chr2 37327419 37327722 -215928861 + AluSq SINE Alu 1 303 -10 907 253 54 74 chr2 37327722 37327873 -215928710 - MLT1I LTR MaLR -254 155 3 1863 199 25 32 chr2 37328047 37328479 -215928104 + MLT1D LTR MaLR 3 431 -74 217 341 185 15 chr2 37328899 37329034 -215927549 - L3 LINE CR1 -6 1571 1414 2482 30 0 10 chr2 37329096 37329398 -215927185 - L1PA4 LINE L1 -2 6153 5855 2386 101 0 0 chr2 37329763 37330071 -215926512 - AluSx SINE Alu -4 308 1 1091 275 126 7 chr2 37330185 37330589 -215925994 + LTR33 LTR ERVL 68 519 -2 456 229 169 0 chr2 37330590 37330708 -215925875 + L2 LINE L2 2631 2768 -546 525 233 161 33 chr2 37330734 37330806 -215925777 - MER20B DNA MER1_type -7 776 715 2377 120 14 19 chr2 37330806 37331172 -215925411 + THE1B LTR MaLR 1 364 0 525 233 161 33 chr2 37331172 37331429 -215925154 - MER20B DNA MER1_type -68 715 405 812 252 161 3 chr2 37331438 37331724 -215924859 + LTR41 LTR ERVL 1 331 -442 364 268 6 76 chr2 37331724 37331881 -215924702 + LTR41 LTR ERVL 230 375 -398 201 39 0 0 chr2 37331881 37331907 -215924676 + (TG)n Simple_repeat Simple_repeat 2 27 0 1224 230 26 4 chr2 37331914 37332184 -215924399 - AluJo SINE Alu -36 276 1 834 242 92 64 chr2 37332187 37332580 -215924003 + LTR41 LTR ERVL 369 772 -1 583 209 50 22 chr2 37332581 37332763 -215923820 - MER20B DNA MER1_type -381 402 216 292 326 44 15 chr2 37332764 37332899 -215923684 + MER91C DNA MER1_type 1 139 -1 607 245 44 0 chr2 37332922 37333081 -215923502 - MER20B DNA MER1_type -582 201 36 471 184 0 0 chr2 37333223 37333364 -215923219 + (TA)n Simple_repeat Simple_repeat 1 141 0 195 69 0 0 chr2 37333369 37333398 -215923185 + (TC)n Simple_repeat Simple_repeat 2 30 0 270 160 0 0 chr2 37333398 37333448 -215923135 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 529 322 23 0 chr2 37333456 37333630 -215922953 - MIR SINE MIR -71 191 14 367 203 13 0 chr2 37333894 37333973 -215922610 + MLT1B LTR MaLR 34 113 -277 254 88 0 0 chr2 37333971 37334005 -215922578 + MLT1C LTR MaLR 434 467 0 * 6598 93 32 37 chr2 37334112 37335317 -215921266 - SVA Other Other -683 1386 382 547 189 33 25 chr2 37335434 37335556 -215921027 + L2 LINE L2 3189 3311 -2 191 330 54 27 chr2 37335860 37335972 -215920611 - MIR SINE MIR -50 212 98 2105 105 10 3 chr2 37336112 37336408 -215920175 + AluY SINE Alu 1 298 -13 303 289 253 5 chr2 37336940 37337130 -215919453 - MIR SINE MIR -16 246 10 207 280 0 0 chr2 37337642 37337692 -215918891 - L2 LINE L2 -1 3271 3222 260 343 118 0 chr2 37338584 37338686 -215917897 + MER91A DNA MER1_type 1 114 -82 21 36 0 0 chr2 37338900 37338928 -215917655 + AT_rich Low_complexity Low_complexity 1 28 0 34 24 0 0 chr2 37339230 37339271 -215917312 + AT_rich Low_complexity Low_complexity 1 41 0 513 269 104 22 chr2 37339313 37339495 -215917088 + MIR3 SINE MIR 1 197 -11 5103 174 29 15 chr2 37340003 37341468 -215915115 - L1MA9 LINE L1 0 7731 6242 3027 233 59 31 chr2 37341451 37341556 -215915027 - L1MA9 LINE L1 -3122 4443 4342 * 2169 41 41 61 chr2 37341556 37341849 -215914734 - AluY SINE Alu -20 291 5 3027 233 59 31 chr2 37341849 37343344 -215913239 - L1MA9 LINE L1 -3223 4342 2785 356 312 206 41 chr2 37343866 37344302 -215912281 - L2 LINE L2 -568 2746 2239 1791 155 0 21 chr2 37344497 37344813 -215911770 - AluJo SINE Alu 0 310 1 2328 106 3 0 chr2 37345276 37345588 -215910995 + AluSq SINE Alu 1 313 0 1283 160 0 63 chr2 37346990 37347033 -215909550 + AluJo SINE Alu 37 81 -231 2428 87 3 0 chr2 37347033 37347333 -215909250 + AluSp SINE Alu 1 301 -12 1283 160 0 63 chr2 37347333 37347526 -215909057 + AluJo SINE Alu 81 258 -54 23 0 0 0 chr2 37347530 37347553 -215909030 + AT_rich Low_complexity Low_complexity 1 23 0 607 106 34 28 chr2 37348315 37348494 -215908089 + (TA)n Simple_repeat Simple_repeat 1 180 0 1873 178 0 0 chr2 37348854 37349146 -215907437 + AluJo SINE Alu 1 292 -20 869 160 0 0 chr2 37349203 37349334 -215907249 + FLAM_C SINE Alu 1 131 -12 2594 114 27 41 chr2 37349771 37350209 -215906374 + MSTB1 LTR MaLR 1 432 0 808 252 122 28 chr2 37350760 37351121 -215905462 - L1ME3 LINE L1 -211 5951 5557 2214 119 7 3 chr2 37351319 37351621 -215904962 + AluSx SINE Alu 1 303 -9 2269 120 0 0 chr2 37352422 37352722 -215903861 + AluSq SINE Alu 1 300 -13 413 303 144 64 chr2 37352811 37353134 -215903449 + L2 LINE L2 2825 3189 -83 2198 113 7 0 chr2 37353134 37353426 -215903157 - AluSx SINE Alu -18 294 1 413 303 144 64 chr2 37353426 37353511 -215903072 + L2 LINE L2 3189 3266 -6 368 284 121 37 chr2 37353974 37354164 -215902419 + MIR SINE MIR 23 228 -34 1645 194 61 27 chr2 37354182 37354626 -215901957 + L1ME2 LINE L1 5696 6154 -10 1836 111 9 79 chr2 37354638 37354954 -215901629 - AluSx SINE Alu -18 294 1 2730 130 33 10 chr2 37355405 37355890 -215900693 + L1MB3 LINE L1 5686 6181 -2 745 124 0 0 chr2 37355948 37356061 -215900522 - AluSp/q SINE Alu -3 310 198 1813 136 7 34 chr2 37356130 37356424 -215900159 + AluJb SINE Alu 1 286 -26 1679 149 0 8 chr2 37356536 37356785 -215899798 - AluSq SINE Alu -66 247 1 433 241 74 54 chr2 37356794 37356997 -215899586 + L1MC4 LINE L1 7819 8025 -17 2470 85 0 0 chr2 37357146 37357451 -215899132 + AluSq SINE Alu 1 305 -8 198 0 0 0 chr2 37357616 37357638 -215898945 + (CA)n Simple_repeat Simple_repeat 1 22 0 296 244 35 17 chr2 37357722 37357870 -215898713 + (CATA)n Simple_repeat Simple_repeat 1 150 0 348 179 15 0 chr2 37357870 37357937 -215898646 - MER45 DNA AcHobo -3 1578 1511 307 257 43 0 chr2 37357929 37357999 -215898584 - MER45 DNA AcHobo -102 76 4 * 230 261 15 15 chr2 37357999 37358064 -215898519 + (TATG)n Simple_repeat Simple_repeat 2 66 0 472 218 59 96 chr2 37358253 37358389 -215898194 - L1MC5 LINE L1 -55 7906 7767 1712 177 0 7 chr2 37358389 37358660 -215897923 - AluJo SINE Alu -20 292 24 472 218 59 96 chr2 37358660 37359200 -215897383 - L1MC5 LINE L1 -194 7767 7260 471 217 212 29 chr2 37359193 37359446 -215897137 - L1MC4 LINE L1 -728 7233 6959 * 258 319 26 9 chr2 37359558 37359674 -215896909 - L2 LINE L2 -785 2529 2412 757 175 25 25 chr2 37360208 37360368 -215896215 - MLT1D LTR MaLR 0 505 346 2565 144 108 10 chr2 37360498 37361019 -215895564 - L1MB8 LINE L1 0 6178 5607 721 179 15 22 chr2 37361742 37361876 -215894707 - FLAM_A SINE Alu 0 133 1 198 0 0 0 chr2 37362250 37362272 -215894311 + (TC)n Simple_repeat Simple_repeat 2 23 0 * 282 56 0 0 chr2 37362271 37362307 -215894276 + (TA)n Simple_repeat Simple_repeat 1 36 0 2182 130 0 0 chr2 37362308 37362601 -215893982 - AluSx SINE Alu -19 293 1 27 49 0 0 chr2 37362601 37362642 -215893941 + AT_rich Low_complexity Low_complexity 1 41 0 445 219 163 0 chr2 37362750 37362873 -215893710 + MER5B DNA MER1_type 2 144 -34 230 246 15 31 chr2 37363254 37363319 -215893264 + L3 LINE CR1 573 636 -941 593 313 70 14 chr2 37363326 37363540 -215893043 + L3 LINE CR1 1341 1566 -11 1948 148 13 10 chr2 37365678 37365982 -215890601 - AluSx SINE Alu -7 305 1 1060 204 38 5 chr2 37366210 37366421 -215890162 + MER20 DNA MER1_type 1 218 -1 233 216 0 0 chr2 37366467 37366518 -215890065 + CT-rich Low_complexity Low_complexity 1 51 0 1662 105 4 4 chr2 37366687 37366916 -215889667 + AluSc SINE Alu 1 229 -80 213 175 16 16 chr2 37367017 37367080 -215889503 + (TA)n Simple_repeat Simple_repeat 2 64 0 648 294 56 36 chr2 37367153 37367490 -215889093 + MLT1I LTR MaLR 63 406 -3 442 314 71 35 chr2 37367491 37367862 -215888721 + L1MC4a LINE L1 4489 4884 -1262 1298 130 39 0 chr2 37367862 37368092 -215888491 - L1MB4 LINE L1 -2 6178 5940 442 314 71 35 chr2 37368092 37368211 -215888372 + L1MC4a LINE L1 4884 4997 -1149 2354 101 3 10 chr2 37368334 37368641 -215887942 + AluSq SINE Alu 2 306 -7 356 308 161 22 chr2 37368729 37369020 -215887563 + L1MC4a LINE L1 5259 5586 -2199 1183 153 0 110 chr2 37369194 37369448 -215887135 + AluJo SINE Alu 86 311 -1 319 205 0 24 chr2 37369469 37369552 -215887031 + L1MC4a LINE L1 5770 5850 -1958 2316 75 0 47 chr2 37370161 37370479 -215886104 - AluY SINE Alu -6 305 3 617 285 167 11 chr2 37370524 37370805 -215885778 + L3 LINE CR1 1242 1566 -11 2079 128 0 36 chr2 37370991 37371318 -215885265 - AluSx SINE Alu 0 312 1 957 167 39 0 chr2 37371342 37371498 -215885085 - AluJb SINE Alu -15 297 136 1964 144 3 3 chr2 37372049 37372361 -215884222 + AluSx SINE Alu 1 312 0 1773 177 13 0 chr2 37372375 37372674 -215883909 + AluJb SINE Alu 1 303 -9 1898 142 3 29 chr2 37373145 37373455 -215883128 + AluJb SINE Alu 1 302 -10 23 68 0 0 chr2 37374674 37374718 -215881865 + AT_rich Low_complexity Low_complexity 1 44 0 2242 97 10 0 chr2 37374718 37375008 -215881575 - AluSx SINE Alu -19 293 1 35 24 0 0 chr2 37375416 37375458 -215881125 + AT_rich Low_complexity Low_complexity 1 42 0 2198 34 45 8 chr2 37375510 37375778 -215880805 + AluY SINE Alu 33 310 -1 2050 147 0 3 chr2 37375923 37376222 -215880361 + AluSx SINE Alu 1 298 -14 2570 56 0 0 chr2 37376224 37376528 -215880055 + AluY SINE Alu 1 304 -7 183 319 77 33 chr2 37376681 37376772 -215879811 - L2 LINE L2 -37 3235 3141 180 0 0 0 chr2 37376860 37376880 -215879703 + (T)n Simple_repeat Simple_repeat 1 20 0 195 282 107 10 chr2 37377593 37377696 -215878887 + MIR SINE MIR 124 236 -26 1963 78 12 8 chr2 37378127 37378385 -215878198 + AluSg SINE Alu 1 259 -51 337 228 47 16 chr2 37378486 37378613 -215877970 + AluSc SINE Alu 164 294 -5 1860 158 7 10 chr2 37378968 37379265 -215877318 + AluJb SINE Alu 5 300 -12 2093 122 7 7 chr2 37379434 37379737 -215876846 - AluSc SINE Alu -5 304 2 2374 94 0 0 chr2 37380263 37380560 -215876023 - AluSc SINE Alu -12 297 1 185 91 0 30 chr2 37380862 37380895 -215875688 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 222 294 22 33 chr2 37380978 37381070 -215875513 - MER5A DNA MER1_type -28 161 71 1884 103 65 17 chr2 37381076 37381368 -215875215 - AluSg SINE Alu -4 306 1 890 128 0 28 chr2 37382022 37382163 -215874420 - FLAM_C SINE Alu -6 137 1 22 56 0 0 chr2 37382299 37382335 -215874248 + AT_rich Low_complexity Low_complexity 1 36 0 1871 103 113 14 chr2 37382418 37382700 -215873883 + AluSg SINE Alu 1 310 0 767 313 90 36 chr2 37382840 37383454 -215873129 + L2 LINE L2 2463 3130 -142 2297 110 3 0 chr2 37383454 37383754 -215872829 - AluSx SINE Alu -11 301 1 767 313 90 36 chr2 37383754 37383891 -215872692 + L2 LINE L2 3130 3258 -14 395 131 16 0 chr2 37384380 37384441 -215872142 + LTR19A LTR ERV1 1 62 -424 30980 80 12 10 chr2 37384445 37385806 -215870777 + HERVFH19I LTR ERV1 1493 2851 -4868 1998 123 7 7 chr2 37385806 37386112 -215870471 - AluSx SINE Alu 0 306 1 30980 80 12 10 chr2 37386112 37388020 -215868563 + HERVFH19I LTR ERV1 2851 4773 -2946 2283 97 7 0 chr2 37388020 37388319 -215868264 + AluSg SINE Alu 1 301 -9 30980 80 12 10 chr2 37388319 37389458 -215867125 + HERVFH19I LTR ERV1 4773 5909 -1810 533 286 28 113 chr2 37390198 37390481 -215866102 + L2 LINE L2 3014 3272 0 242 241 27 80 chr2 37392731 37392843 -215863740 + L3 LINE CR1 391 496 -1081 579 319 91 25 chr2 37392999 37393360 -215863223 - LTR16B LTR ERVL -4 446 62 261 0 0 0 chr2 37393712 37393741 -215862842 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1502 179 15 101 chr2 37393799 37393846 -215862737 + MLT1B LTR MaLR 6 55 -335 2156 120 0 0 chr2 37393846 37394156 -215862427 + AluSx SINE Alu 1 310 0 1502 179 15 101 chr2 37394156 37394515 -215862068 + MLT1B LTR MaLR 55 378 -12 14820 36 8 1 chr2 37394960 37397529 -215859054 + L1PA4 LINE L1 3579 6155 0 739 122 0 0 chr2 37397665 37397772 -215858811 - AluSc SINE Alu -18 291 185 635 120 0 0 chr2 37397771 37397863 -215858720 - AluS SINE Alu -221 92 1 * 381 93 0 0 chr2 37398039 37398093 -215858490 + (CA)n Simple_repeat Simple_repeat 2 55 0 1883 131 4 0 chr2 37398093 37398367 -215858216 - AluSx SINE Alu -35 277 3 520 330 80 24 chr2 37398604 37398940 -215857643 + L3 LINE CR1 510 864 -713 201 243 0 0 chr2 37399050 37399087 -215857496 + (TG)n Simple_repeat Simple_repeat 2 38 0 571 358 156 7 chr2 37399337 37399767 -215856816 + L3 LINE CR1 1009 1502 -75 785 272 39 4 chr2 37399876 37400108 -215856475 - MLT1C LTR MaLR 0 467 228 564 219 63 40 chr2 37400167 37400367 -215856216 - MLT1C LTR MaLR -182 217 6 831 229 62 45 chr2 37401288 37401393 -215855190 + MLT1B LTR MaLR 6 108 -282 1910 181 0 0 chr2 37401393 37401691 -215854892 + AluSx SINE Alu 3 300 -12 831 229 62 45 chr2 37401691 37402032 -215854551 + MLT1B LTR MaLR 108 388 -2 486 248 129 50 chr2 37402034 37402441 -215854142 + MLT1C LTR MaLR 37 467 0 230 343 76 29 chr2 37403258 37403363 -215853220 - L2 LINE L2 -13 3259 3150 213 39 0 0 chr2 37403563 37403589 -215852994 + (TG)n Simple_repeat Simple_repeat 1 26 0 207 69 0 0 chr2 37403589 37403618 -215852965 + (GA)n Simple_repeat Simple_repeat 2 30 0 6746 223 35 30 chr2 37403942 37405678 -215850905 + L1MC1 LINE L1 3145 4897 -1249 2008 98 0 4 chr2 37405678 37405934 -215850649 + AluSx SINE Alu 44 298 -14 6746 223 35 30 chr2 37405934 37406370 -215850213 + L1MC1 LINE L1 4897 5329 -817 248 90 57 0 chr2 37406389 37406439 -215850144 + Alu SINE Alu 254 291 -11 4879 166 17 2 chr2 37406447 37407366 -215849217 + L1MC1 LINE L1 5325 6257 -76 2250 142 28 16 chr2 37407373 37407626 -215848957 + L1MB2 LINE L1 5742 6003 -168 1979 158 12 54 chr2 37407626 37408031 -215848552 - MLT1B LTR MaLR 0 390 3 2250 142 28 16 chr2 37408031 37408200 -215848383 + L1MB2 LINE L1 6003 6169 -2 379 284 10 36 chr2 37408243 37408437 -215848146 + L1MC/D LINE L1 1387 1575 -4965 976 169 0 0 chr2 37408469 37408652 -215847931 + L1MA4A LINE L1 6059 6241 -62 241 218 13 0 chr2 37408694 37408772 -215847811 + L1MA4A LINE L1 6225 6303 0 3341 241 50 35 chr2 37408783 37409293 -215847290 + L1MC/D LINE L1 4149 4650 -1890 306 0 0 0 chr2 37409293 37409327 -215847256 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 3341 241 50 35 chr2 37409327 37410050 -215846533 + L1MC/D LINE L1 4650 5401 -1139 1262 150 24 12 chr2 37410057 37410310 -215846273 + L1MC/D LINE L1 5699 5954 -799 222 37 0 0 chr2 37410471 37410498 -215846085 + (CATA)n Simple_repeat Simple_repeat 2 28 0 29 28 0 0 chr2 37410513 37410549 -215846034 + AT_rich Low_complexity Low_complexity 1 36 0 33 43 0 0 chr2 37410664 37410711 -215845872 + AT_rich Low_complexity Low_complexity 1 47 0 546 251 54 18 chr2 37412222 37412389 -215844194 + MER63A DNA MER1_type 38 210 0 201 244 0 0 chr2 37412409 37412450 -215844133 - L2 LINE L2 -7 3306 3266 2260 116 0 0 chr2 37413009 37413310 -215843273 - AluSx SINE Alu -11 301 1 481 168 138 78 chr2 37414264 37414456 -215842127 - L1MA10 LINE L1 -18 6295 6107 205 366 67 43 chr2 37416402 37416566 -215840017 - L2 LINE L2 -1 3271 3104 225 0 0 0 chr2 37416613 37416638 -215839945 + (CA)n Simple_repeat Simple_repeat 1 25 0 441 308 97 11 chr2 37417724 37417913 -215838670 - MIR SINE MIR -17 245 40 2069 135 39 39 chr2 37417949 37418313 -215838270 - THE1B LTR MaLR 0 364 1 342 0 0 0 chr2 37419404 37419442 -215837141 + (CA)n Simple_repeat Simple_repeat 2 39 0 240 386 79 16 chr2 37420368 37420495 -215836088 - L2 LINE L2 0 3272 3138 3158 125 17 23 chr2 37422655 37423119 -215833464 - L1PB4 LINE L1 -7 6149 5687 2258 113 7 0 chr2 37423119 37423428 -215833155 - AluSq SINE Alu -2 311 1 3158 125 17 23 chr2 37423428 37423491 -215833092 - L1PB4 LINE L1 -469 5687 5625 215 245 0 0 chr2 37424896 37424945 -215831638 - L3b LINE CR1 -241 1342 1294 216 371 28 28 chr2 37425742 37425885 -215830698 - MER5A DNA MER1_type 0 189 47 219 114 0 0 chr2 37426047 37426082 -215830501 + (CA)n Simple_repeat Simple_repeat 1 35 0 1338 216 24 27 chr2 37426086 37426415 -215830168 + L1MC4 LINE L1 5362 5689 -2119 1028 40 0 0 chr2 37426846 37426972 -215829611 - L1PA5 LINE L1 -6 6148 6023 24 0 0 0 chr2 37427106 37427130 -215829453 + AT_rich Low_complexity Low_complexity 1 24 0 3259 158 113 5 chr2 37427259 37427922 -215828661 - L1MA8 LINE L1 -2 6289 5555 364 244 47 0 chr2 37428042 37428128 -215828455 + L1MC4 LINE L1 6614 6703 -1339 345 300 0 0 chr2 37428066 37428156 -215828427 - L1MC4 LINE L1 -1339 6703 6614 * 317 299 34 54 chr2 37428888 37429035 -215827548 + MER5B DNA MER1_type 1 144 -34 243 263 0 0 chr2 37431285 37431342 -215825241 - L2 LINE L2 0 3313 3257 564 283 69 0 chr2 37431440 37431613 -215824970 + MER5A DNA MER1_type 2 186 -3 287 309 55 27 chr2 37432715 37432825 -215823758 + L2 LINE L2 3200 3312 -1 2054 127 7 10 chr2 37432880 37433180 -215823403 - AluSx SINE Alu -13 299 1 22 35 0 0 chr2 37433750 37433779 -215822804 + AT_rich Low_complexity Low_complexity 1 29 0 5684 114 19 2 chr2 37433889 37435195 -215821388 - L1PA16 LINE L1 -10 6156 4883 997 290 234 15 chr2 37435252 37436131 -215820452 + L2 LINE L2 2163 3309 -4 287 260 80 0 chr2 37436432 37436532 -215820051 - L1ME LINE L1 -468 5653 5546 662 136 8 0 chr2 37436778 37436896 -215819687 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 237 310 212 18 chr2 37437718 37437831 -215818752 + MIR3 SINE MIR 8 142 -66 255 314 114 83 chr2 37439684 37439948 -215816635 + L2 LINE L2 2999 3270 -2 471 35 0 0 chr2 37440354 37440396 -215816187 + (CA)n Simple_repeat Simple_repeat 1 99 0 471 35 0 0 chr2 37440396 37440453 -215816130 + (CA)n Simple_repeat Simple_repeat 2 58 0 721 217 0 7 chr2 37440475 37440613 -215815970 - FRAM SINE Alu -29 147 11 519 330 61 57 chr2 37442062 37442520 -215814063 + L2 LINE L2 2375 2834 -480 463 277 14 35 chr2 37442994 37443135 -215813448 + MER5A DNA MER1_type 49 186 -3 361 324 39 100 chr2 37443139 37443500 -215813083 - L2 LINE L2 -1157 2157 1819 257 341 15 0 chr2 37443500 37443632 -215812951 + L1ME LINE L1 5725 5858 -304 35 63 0 0 chr2 37443696 37443759 -215812824 + AT_rich Low_complexity Low_complexity 1 63 0 1402 128 32 4 chr2 37443808 37444059 -215812524 + L1MA7 LINE L1 6034 6291 0 3243 257 38 61 chr2 37444225 37445289 -215811294 + L1M4 LINE L1 4 1042 -5817 1673 212 45 67 chr2 37445297 37446010 -215810573 + L1M4 LINE L1 1150 1858 -4997 1749 214 55 2 chr2 37446010 37446467 -215810116 + L1M4 LINE L1 5551 6031 -926 1274 132 59 14 chr2 37446467 37446686 -215809897 - Tigger1 DNA MER2_type -2188 230 2 626 240 35 6 chr2 37446696 37446867 -215809716 - MIR SINE MIR -42 220 45 191 268 70 28 chr2 37449787 37449858 -215806725 + MIR SINE MIR 51 124 -138 21 0 0 0 chr2 37450447 37450468 -215806115 + AT_rich Low_complexity Low_complexity 1 21 0 1882 147 0 36 chr2 37451029 37451336 -215805247 + AluJb SINE Alu 1 296 -16 197 268 18 0 chr2 37451943 37451999 -215804584 + L2 LINE L2 3216 3272 0 194 250 0 0 chr2 37452110 37452150 -215804433 - L2 LINE L2 0 3272 3233 447 359 80 44 chr2 37452158 37452523 -215804060 - L2 LINE L2 -18 3295 2918 955 195 96 53 chr2 37452674 37452956 -215803627 - L1ME1 LINE L1 -41 6125 5832 2988 143 24 44 chr2 37453023 37453570 -215803013 + L1MA9 LINE L1 5482 6017 -295 28 0 0 0 chr2 37453570 37453598 -215802985 + AT_rich Low_complexity Low_complexity 1 28 0 3694 150 5 5 chr2 37453631 37454236 -215802347 + MER6A DNA MER2_type 1 605 0 578 268 153 78 chr2 37454236 37454621 -215801962 - L2 LINE L2 -1031 2283 1870 2141 145 18 33 chr2 37454631 37455025 -215801558 + L1MC1 LINE L1 5927 6314 -19 1672 219 37 79 chr2 37455621 37456164 -215800419 - MLT2B1 LTR ERVL 0 520 1 2169 169 13 3 chr2 37456881 37457508 -215799075 + L1MC/D LINE L1 4969 5602 -731 4643 144 24 53 chr2 37457517 37458529 -215798054 + MER11C LTR ERVK 1 1071 0 706 157 0 9 chr2 37458529 37458644 -215797939 + L1MC/D LINE L1 5610 5723 -610 2334 118 8 30 chr2 37458644 37459016 -215797567 - THE1B LTR MaLR 0 364 1 3033 65 43 2 chr2 37459016 37459413 -215797170 - THE1B-int LTR MaLR 0 1580 1168 450 115 0 0 chr2 37459414 37459475 -215797108 - AluSp SINE Alu -126 187 127 768 168 0 0 chr2 37459476 37459601 -215796982 - AluJo/FLAM SINE Alu -177 125 1 227 189 0 19 chr2 37459705 37459758 -215796825 - MLT1I LTR MaLR -26 383 332 1227 198 80 0 chr2 37460292 37460555 -215796028 + L2 LINE L2 2258 2541 -773 2013 330 59 9 chr2 37460599 37461719 -215794864 - HERV16 LTR ERVL -1631 4023 2796 1263 214 18 59 chr2 37461720 37462157 -215794426 + MLT2B1 LTR ERVL 1 413 -1 271 293 95 17 chr2 37462225 37462307 -215794276 + MER45 DNA AcHobo 1437 1532 -49 3535 90 14 0 chr2 37462307 37462795 -215793788 - L1PA13 LINE L1 -19 6144 5650 271 293 95 17 chr2 37462795 37462828 -215793755 + MER45 DNA AcHobo 1532 1561 -20 615 309 34 19 chr2 37462950 37463270 -215793313 - HERV16 LTR ERVL -3762 1234 910 408 197 211 136 chr2 37464380 37464608 -215791975 + MIR SINE MIR 15 259 -3 229 410 63 9 chr2 37465574 37465796 -215790787 + MIR SINE MIR 5 238 -24 697 237 73 16 chr2 37468143 37468357 -215788226 - MIR SINE MIR -4 258 30 801 137 60 60 chr2 37470311 37470494 -215786089 + MER53 DNA DNA 1 183 -6 530 259 49 60 chr2 37470561 37470640 -215785943 + MER5A DNA MER1_type 1 79 -110 1729 185 34 0 chr2 37470640 37470937 -215785646 + AluJb SINE Alu 1 307 -5 1769 154 32 29 chr2 37470937 37471248 -215785335 + AluSx SINE Alu 1 312 0 530 259 49 60 chr2 37471248 37471352 -215785231 + MER5A DNA MER1_type 77 183 -6 507 201 345 0 chr2 37472302 37472496 -215784087 + MIR SINE MIR 2 262 0 362 309 11 53 chr2 37472631 37472819 -215783764 - MER5A DNA MER1_type -2 187 8 536 267 112 5 chr2 37473015 37473202 -215783381 - MIR SINE MIR 0 262 56 462 284 20 76 chr2 37473243 37473440 -215783143 - MER5A DNA MER1_type 0 189 4 501 229 0 134 chr2 37474291 37474492 -215782091 + MIR SINE MIR 87 260 -2 2124 135 140 8 chr2 37474559 37474937 -215781646 - MSTA LTR MaLR 0 428 1 666 138 132 53 chr2 37475913 37476083 -215780500 + MER63A DNA MER1_type 28 210 0 371 321 47 70 chr2 37476219 37476434 -215780149 + HAL1 LINE L1 1 210 -2297 193 313 35 97 chr2 37476558 37476702 -215779881 + L3 LINE CR1 1421 1555 -22 251 258 83 53 chr2 37477071 37477149 -215779434 - L2 LINE L2 -3 3310 3225 1655 163 39 20 chr2 37477149 37477455 -215779128 + AluJo SINE Alu 1 312 0 251 258 83 53 chr2 37477455 37477508 -215779075 - L2 LINE L2 -88 3225 3175 308 130 0 0 chr2 37478258 37478312 -215778271 + MER53 DNA DNA 29 82 -107 783 288 58 4 chr2 37478431 37478492 -215778091 + L2 LINE L2 3021 3077 -236 1933 123 13 40 chr2 37478492 37478793 -215777790 + AluSx SINE Alu 1 293 -19 783 288 58 4 chr2 37478793 37479009 -215777574 + L2 LINE L2 3077 3313 0 1961 136 58 17 chr2 37479459 37479819 -215776764 - THE1C LTR MaLR 0 375 1 226 222 0 0 chr2 37480547 37480592 -215775991 + GA-rich Low_complexity Low_complexity 1 45 0 1887 110 0 101 chr2 37480653 37480980 -215775603 + AluSx SINE Alu 1 294 -18 418 229 0 0 chr2 37481081 37481164 -215775419 + L2 LINE L2 3231 3313 0 2527 49 0 10 chr2 37482250 37482556 -215774027 + AluY SINE Alu 1 303 -8 346 274 35 44 chr2 37482557 37482670 -215773913 - L2 LINE L2 -19 3253 3142 21 36 0 0 chr2 37485013 37485041 -215771542 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 37485375 37485397 -215771186 + (CA)n Simple_repeat Simple_repeat 2 23 0 646 238 0 0 chr2 37485622 37485748 -215770835 + FLAM_C SINE Alu 1 126 -7 628 258 57 57 chr2 37485912 37486141 -215770442 - MER21B LTR ERV1 -362 501 273 420 291 28 50 chr2 37486211 37486352 -215770231 + L2 LINE L2 3127 3264 -8 22 0 0 0 chr2 37486355 37486377 -215770206 + AT_rich Low_complexity Low_complexity 1 22 0 236 367 33 0 chr2 37486647 37486737 -215769846 + MIR SINE MIR 58 150 -58 17236 180 28 13 chr2 37486753 37487436 -215769147 + L1P LINE L1 805 1476 -4670 2076 127 7 0 chr2 37487436 37487727 -215768856 + AluSg SINE Alu 1 293 -17 17236 180 28 13 chr2 37487727 37490811 -215765772 + L1P LINE L1 1476 4628 -1518 * 23348 96 7 15 chr2 37490810 37494386 -215762197 - L1P LINE L1 -2590 3556 11 793 120 73 7 chr2 37494393 37494543 -215762040 - MLT1A1 LTR MaLR -205 160 1 364 322 187 12 chr2 37495631 37496029 -215760554 - L2 LINE L2 -187 3085 2595 2220 110 30 0 chr2 37496033 37496332 -215760251 + AluSc SINE Alu 1 308 -1 666 328 96 37 chr2 37496690 37497147 -215759436 + L3 LINE CR1 1064 1547 -30 653 171 0 83 chr2 37497970 37498077 -215758506 + L1MA4 LINE L1 6124 6212 -88 2465 71 0 6 chr2 37498077 37498388 -215758195 + AluY SINE Alu 1 309 -2 653 171 0 83 chr2 37498388 37498461 -215758122 + L1MA4 LINE L1 6212 6289 -11 281 288 32 8 chr2 37498961 37499086 -215757497 + L1MB7 LINE L1 5520 5647 -665 431 196 26 0 chr2 37499292 37499445 -215757138 + (TA)n Simple_repeat Simple_repeat 1 157 0 23 33 0 0 chr2 37499579 37499609 -215756974 + AT_rich Low_complexity Low_complexity 1 30 0 7092 100 6 15 chr2 37501572 37502639 -215753944 + MER11C LTR ERVK 1 1057 -14 304 44 0 22 chr2 37503167 37503212 -215753371 + L1PA16 LINE L1 6109 6152 -14 23 0 0 0 chr2 37503445 37503468 -215753115 + AT_rich Low_complexity Low_complexity 1 23 0 351 0 0 0 chr2 37504379 37504418 -215752165 + (TG)n Simple_repeat Simple_repeat 2 40 0 7957 228 31 9 chr2 37504943 37507292 -215749291 + L1M4 LINE L1 2458 4859 -1287 901 179 21 16 chr2 37507305 37507495 -215749088 + L1MB7 LINE L1 5936 6126 -58 207 69 0 0 chr2 37507502 37507531 -215749052 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 207 333 111 12 chr2 37507552 37507723 -215748860 + L2 LINE L2 3122 3309 -4 211 254 16 16 chr2 37508186 37508249 -215748334 - L2 LINE L2 0 3313 3251 243 197 49 0 chr2 37508863 37508924 -215747659 + L1M4 LINE L1 4727 4790 -1356 698 210 36 30 chr2 37509360 37509527 -215747056 + MER5A DNA MER1_type 15 182 -7 483 320 81 72 chr2 37509915 37510542 -215746041 + L2 LINE L2 2638 3268 -4 3787 169 33 33 chr2 37511082 37511412 -215745171 - MER44D DNA MER2_type -1882 605 401 2249 104 16 0 chr2 37511412 37511719 -215744864 - AluSq SINE Alu -1 312 1 3787 169 33 33 chr2 37511719 37512121 -215744462 - MER44D DNA MER2_type -2085 402 1 219 244 0 0 chr2 37512201 37512246 -215744337 - MER91B DNA MER1_type -127 63 19 1505 269 27 48 chr2 37512344 37512984 -215743599 + MER20B DNA MER1_type 51 676 -107 282 160 10 20 chr2 37513018 37513118 -215743465 + (TA)n Simple_repeat Simple_repeat 1 99 0 344 202 77 10 chr2 37513146 37513250 -215743333 + MER20B DNA MER1_type 668 778 -5 521 244 9 0 chr2 37513453 37513568 -215743015 - Tigger7 DNA MER2_type -588 117 2 677 143 0 0 chr2 37513672 37513795 -215742788 - AluSg/x SINE Alu 0 307 185 526 348 119 26 chr2 37513813 37514267 -215742316 - L2 LINE L2 -1 3312 2817 366 123 0 0 chr2 37514352 37514409 -215742174 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 290 382 65 0 chr2 37514607 37514730 -215741853 - L2 LINE L2 -3 3269 3139 345 47 0 0 chr2 37514878 37514921 -215741662 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 189 74 0 0 chr2 37514921 37514948 -215741635 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 674 311 27 0 chr2 37515019 37515202 -215741381 + MIR SINE MIR 10 197 -65 350 310 26 39 chr2 37515207 37515449 -215741134 - MLT1H LTR MaLR 0 549 312 269 68 23 0 chr2 37515686 37515730 -215740853 + (TA)n Simple_repeat Simple_repeat 1 45 0 208 237 34 51 chr2 37515739 37515798 -215740785 + MIR SINE MIR 205 262 0 662 330 53 4 chr2 37516057 37516284 -215740299 + MIR SINE MIR 25 262 0 709 186 27 66 chr2 37516323 37516506 -215740077 - MER5B DNA MER1_type 0 178 3 513 276 58 13 chr2 37516513 37516669 -215739914 - MIR3 SINE MIR -26 182 20 306 153 59 0 chr2 37517018 37517103 -215739480 + CT-rich Low_complexity Low_complexity 4 93 0 215 301 71 26 chr2 37518074 37518187 -215738396 - L3 LINE CR1 -875 702 585 309 308 76 17 chr2 37519158 37519395 -215737188 - L1ME4a LINE L1 -198 5923 5673 1371 175 32 20 chr2 37519402 37519653 -215736930 - AluJo SINE Alu -58 254 1 551 292 40 25 chr2 37519730 37520019 -215736564 - L1ME4a LINE L1 -526 5595 5346 334 209 39 78 chr2 37520172 37520325 -215736258 + MARNA DNA Mariner 415 561 -25 867 303 4 0 chr2 37520332 37520566 -215736017 + MIR SINE MIR 18 252 -10 2145 129 3 0 chr2 37520630 37520979 -215735604 - AluSq SINE Alu 0 313 1 2486 40 7 0 chr2 37520987 37521284 -215735299 - AluY SINE Alu -12 299 1 486 40 0 53 chr2 37521506 37521581 -215735002 - L1PA16 LINE L1 -1 6165 6095 209 359 68 44 chr2 37521963 37522169 -215734414 + MIR SINE MIR 47 257 -5 1379 149 0 5 chr2 37522596 37522804 -215733779 + AluJb SINE Alu 1 207 -105 819 117 17 28 chr2 37522811 37522990 -215733593 + GA-rich Low_complexity Low_complexity 4 180 0 272 155 0 17 chr2 37522985 37523043 -215733540 + G-rich Low_complexity Low_complexity 5 61 0 * 292 262 28 56 chr2 37523380 37523487 -215733096 + MIR3 SINE MIR 98 201 -7 347 294 31 37 chr2 37523919 37524082 -215732501 - MER104 DNA Tc2 -18 162 1 235 250 0 0 chr2 37524303 37524355 -215732228 - MIR SINE MIR -9 253 202 196 26 26 53 chr2 37524355 37524393 -215732190 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 2239 115 0 13 chr2 37526084 37526389 -215730194 - AluSx SINE Alu -11 301 1 990 252 88 45 chr2 37526428 37526825 -215729758 - MLT1J2 LTR MaLR -18 432 19 539 325 114 19 chr2 37526933 37527309 -215729274 - MARNA DNA Mariner -55 531 120 21 36 0 0 chr2 37527815 37527843 -215728740 + AT_rich Low_complexity Low_complexity 1 28 0 445 244 133 82 chr2 37527959 37528471 -215728112 + L1ME4a LINE L1 5562 6099 -22 410 266 145 28 chr2 37528505 37528570 -215728013 + MIR SINE MIR 21 77 -185 1275 204 36 22 chr2 37528570 37528844 -215727739 - AluJb SINE Alu -30 282 5 410 266 145 28 chr2 37528844 37528992 -215727591 + MIR SINE MIR 77 259 -3 416 307 15 93 chr2 37529169 37529439 -215727144 + MIR SINE MIR 14 262 0 283 297 89 0 chr2 37529720 37529821 -215726762 - MIR SINE MIR -71 191 82 270 0 0 0 chr2 37529822 37529852 -215726731 + (GA)n Simple_repeat Simple_repeat 2 31 0 216 0 0 0 chr2 37529851 37529875 -215726708 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 203 79 26 0 chr2 37530669 37530707 -215725876 + (CCCCCA)n Simple_repeat Simple_repeat 3 41 0 2310 99 0 40 chr2 37531990 37532314 -215724269 - AluSx SINE Alu -1 311 1 292 256 22 44 chr2 37532374 37532464 -215724119 - L3 LINE CR1 -6 1571 1484 302 290 141 85 chr2 37533752 37533984 -215722599 - L1M2 LINE L1 -5701 1148 931 192 40 0 0 chr2 37533984 37534009 -215722574 + (AGGGGG)n Simple_repeat Simple_repeat 6 30 0 302 290 141 85 chr2 37534009 37534342 -215722241 - L1M2 LINE L1 -5918 931 551 210 71 0 0 chr2 37534422 37534450 -215722133 + (GGA)n Simple_repeat Simple_repeat 1 28 0 29 113 0 0 chr2 37534501 37534642 -215721941 + GC_rich Low_complexity Low_complexity 1 141 0 22 0 0 0 chr2 37535325 37535347 -215721236 + GC_rich Low_complexity Low_complexity 1 22 0 2190 124 0 7 chr2 37541296 37541602 -215714981 + AluSx SINE Alu 1 304 -8 338 265 86 28 chr2 37541610 37541754 -215714829 + MIR SINE MIR 91 247 -15 180 225 0 0 chr2 37542449 37542489 -215714094 + MIR SINE MIR 160 199 -63 499 242 181 0 chr2 37542490 37542639 -215713944 - MER5A DNA MER1_type -2 187 12 394 329 40 28 chr2 37542990 37543189 -215713394 + MIR SINE MIR 4 202 -60 203 263 0 18 chr2 37543191 37543248 -215713335 + (TATG)n Simple_repeat Simple_repeat 1 56 0 29 0 0 0 chr2 37543269 37543298 -215713285 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 37543637 37543659 -215712924 + AT_rich Low_complexity Low_complexity 1 22 0 2210 97 21 0 chr2 37544117 37544406 -215712177 - AluSc SINE Alu -14 295 1 215 278 26 35 chr2 37545797 37545912 -215710671 + MIR SINE MIR 53 166 -96 22 0 0 0 chr2 37548580 37548602 -215707981 + AT_rich Low_complexity Low_complexity 1 22 0 225 255 0 0 chr2 37549775 37549822 -215706761 + L2 LINE L2 3263 3309 -4 644 256 83 33 chr2 37555813 37556055 -215700528 + MIR SINE MIR 9 262 0 229 281 0 0 chr2 37556570 37556627 -215699956 + L2 LINE L2 3216 3272 0 525 70 56 0 chr2 37557187 37557258 -215699325 - AluJ/FRAM SINE Alu -10 302 228 237 132 0 0 chr2 37558107 37558145 -215698438 + (T)n Simple_repeat Simple_repeat 1 38 0 1126 136 0 0 chr2 37560020 37560175 -215696408 + AluSg/x SINE Alu 136 290 -22 193 293 172 10 chr2 37561932 37562031 -215694552 - L2 LINE L2 0 3313 3199 216 338 52 58 chr2 37562111 37562265 -215694318 - L2 LINE L2 -266 3047 2895 931 298 71 15 chr2 37562265 37562658 -215693925 - L2 LINE L2 -5 3308 2894 313 239 0 0 chr2 37564221 37564288 -215692295 + MIR SINE MIR 195 261 -1 22 56 0 0 chr2 37564660 37564696 -215691887 + AT_rich Low_complexity Low_complexity 1 36 0 207 341 96 15 chr2 37564975 37565110 -215691473 - L2 LINE L2 0 3313 3168 354 292 139 14 chr2 37566186 37566467 -215690116 - L1M4 LINE L1 -2920 3226 2911 21 0 0 0 chr2 37566755 37566776 -215689807 + AT_rich Low_complexity Low_complexity 1 21 0 334 353 72 13 chr2 37566851 37567004 -215689579 - MIR3 SINE MIR -6 202 41 1996 146 7 0 chr2 37569189 37569490 -215687093 - AluSx SINE Alu -9 303 1 2480 65 7 3 chr2 37569499 37569808 -215686775 - AluY SINE Alu -1 310 1 1589 206 26 88 chr2 37570036 37570488 -215686095 + Charlie1a DNA MER1_type 1 424 -1031 241 266 0 16 chr2 37570488 37570552 -215686031 - L2 LINE L2 -971 2343 2281 257 209 15 0 chr2 37571847 37571914 -215684669 + (TA)n Simple_repeat Simple_repeat 2 69 0 449 316 122 38 chr2 37571997 37572490 -215684093 - L2 LINE L2 -181 3091 2549 223 270 20 20 chr2 37572932 37573032 -215683551 + (TATATG)n Simple_repeat Simple_repeat 6 105 0 1845 158 45 0 chr2 37573391 37573682 -215682901 - AluSx SINE Alu -8 304 1 1436 174 70 11 chr2 37574320 37574590 -215681993 - AluJo SINE Alu -26 286 1 187 200 0 0 chr2 37575859 37575894 -215680689 + MIR SINE MIR 48 82 -126 216 222 0 95 chr2 37576203 37576266 -215680317 - L3b LINE CR1 -3 1580 1524 210 375 85 48 chr2 37577430 37577947 -215678636 - L2 LINE L2 -384 2930 2395 401 318 70 5 chr2 37577947 37578148 -215678435 - L2 LINE L2 -1528 1786 1573 1753 295 173 22 chr2 37578161 37579258 -215677325 - L2 LINE L2 -1905 1409 147 273 319 0 0 chr2 37580204 37580273 -215676310 - L2 LINE L2 -5 3308 3240 984 319 141 18 chr2 37580520 37581282 -215675301 - L2 LINE L2 -129 3184 2329 332 251 137 34 chr2 37582135 37582310 -215674273 - L2 LINE L2 -896 2418 2226 222 222 0 0 chr2 37582920 37582965 -215673618 - L2 LINE L2 0 3272 3228 283 274 77 17 chr2 37583874 37583991 -215672592 - MER5A DNA MER1_type -57 132 9 219 329 0 0 chr2 37585597 37585670 -215670913 + (TA)n Simple_repeat Simple_repeat 2 74 0 22 0 0 0 chr2 37587689 37587711 -215668872 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr2 37590043 37590066 -215666517 + (TG)n Simple_repeat Simple_repeat 2 24 0 973 292 109 43 chr2 37592791 37593624 -215662959 - L2 LINE L2 0 3272 2370 2095 130 0 0 chr2 37594306 37594614 -215661969 + AluSx SINE Alu 1 308 0 244 289 91 64 chr2 37596435 37596622 -215659961 - L2 LINE L2 -1511 1803 1612 1557 174 67 0 chr2 37596685 37596967 -215659616 - AluJb SINE Alu -11 301 1 245 264 59 18 chr2 37597173 37597296 -215659287 + MIR SINE MIR 49 176 -32 458 281 251 15 chr2 37598626 37598825 -215657758 - MIR SINE MIR -2 260 15 183 296 19 0 chr2 37599037 37599091 -215657492 - L2 LINE L2 -251 3021 2967 934 294 30 11 chr2 37600206 37600573 -215656010 - MARNA DNA Mariner -165 421 48 451 227 170 41 chr2 37602148 37602342 -215654241 - MIR SINE MIR 0 262 44 232 361 48 0 chr2 37602438 37602521 -215654062 - L2 LINE L2 -30 3242 3156 263 326 41 10 chr2 37602704 37602802 -215653781 + L2 LINE L2 3161 3261 -11 181 263 30 50 chr2 37602809 37602908 -215653675 - L2 LINE L2 -272 3000 2904 450 96 0 48 chr2 37603169 37603252 -215653331 + L1MA4 LINE L1 6190 6268 -32 299 307 80 13 chr2 37603326 37603476 -215653107 - MIR3 SINE MIR -24 184 25 2433 103 0 0 chr2 37605301 37605611 -215650972 + AluSg SINE Alu 1 310 0 192 200 0 108 chr2 37605697 37605762 -215650821 + L3 LINE CR1 1345 1402 -175 281 292 22 11 chr2 37606584 37606673 -215649910 + MIR SINE MIR 41 130 -78 347 220 123 30 chr2 37607196 37607371 -215649212 + MLT1J LTR MaLR 1 157 -289 448 256 160 0 chr2 37608063 37608188 -215648395 + MER5A DNA MER1_type 2 146 -43 21 0 0 0 chr2 37610750 37610771 -215645812 + AT_rich Low_complexity Low_complexity 1 21 0 658 218 11 73 chr2 37611132 37611311 -215645272 - MER5B DNA MER1_type -9 169 2 931 202 17 6 chr2 37611325 37611503 -215645080 - MER5A DNA MER1_type -6 183 4 520 164 14 57 chr2 37611553 37611668 -215644915 - MER5A DNA MER1_type -77 112 4 853 232 0 17 chr2 37611932 37612113 -215644470 - MER5B DNA MER1_type 0 178 1 399 254 107 13 chr2 37612817 37613015 -215643568 + MIR SINE MIR 28 245 -17 252 382 37 0 chr2 37613203 37613339 -215643244 + L2 LINE L2 2921 3061 -252 183 42 0 0 chr2 37613711 37613735 -215642848 + (TG)n Simple_repeat Simple_repeat 1 24 0 603 76 0 0 chr2 37613978 37614057 -215642526 + MADE1 DNA Mariner 1 79 -1 2349 72 0 0 chr2 37615474 37615766 -215640817 + AluY SINE Alu 1 292 -19 426 315 191 16 chr2 37615768 37616019 -215640564 + L1 LINE L1 3643 3937 -2209 2309 110 0 0 chr2 37616232 37616533 -215640050 + AluSc SINE Alu 1 301 -8 558 248 87 7 chr2 37617188 37617337 -215639246 + MIR SINE MIR 20 180 -82 854 259 115 48 chr2 37617829 37618338 -215638245 + L2 LINE L2 2763 3298 -15 451 291 95 19 chr2 37618506 37618664 -215637919 + MIR3 SINE MIR 30 199 -9 204 125 0 0 chr2 37620608 37620640 -215635943 + (T)n Simple_repeat Simple_repeat 1 32 0 616 291 78 26 chr2 37622619 37622887 -215633696 + L3 LINE CR1 1294 1575 -2 196 273 18 0 chr2 37624723 37624778 -215631805 - L2 LINE L2 0 3313 3258 21 0 0 0 chr2 37625612 37625633 -215630950 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 37625762 37625856 -215630727 - MLT1H LTR MaLR 0 549 454 520 265 38 2 chr2 37625974 37626149 -215630434 - MLT1H LTR MaLR -322 227 4 180 311 16 0 chr2 37627992 37628053 -215628530 + L3 LINE CR1 1513 1574 -3 191 366 70 0 chr2 37631814 37631885 -215624698 + L2 LINE L2 3148 3223 -49 342 357 95 58 chr2 37631982 37632276 -215624307 - L2 LINE L2 -12 3260 2956 198 71 0 0 chr2 37632749 37632777 -215623806 + (CA)n Simple_repeat Simple_repeat 1 28 0 183 383 0 17 chr2 37632906 37632966 -215623617 - L2 LINE L2 -2127 1187 1129 318 288 93 0 chr2 37632991 37633109 -215623474 + Charlie8 DNA MER1_type 26 154 -2263 214 325 136 35 chr2 37633270 37633639 -215622944 - L2 LINE L2 -2199 1115 710 733 291 42 17 chr2 37633688 37633929 -215622654 - MIR SINE MIR -3 259 13 216 294 93 48 chr2 37633982 37634251 -215622332 - L2 LINE L2 -2803 511 231 186 71 0 0 chr2 37635506 37635534 -215621049 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 800 95 35 0 chr2 37635537 37635653 -215620930 - L1PB1 LINE L1 -1 6150 6031 289 336 71 0 chr2 37637166 37637279 -215619304 - MIR3 SINE MIR -5 203 83 251 319 37 15 chr2 37637548 37637683 -215618900 - MER5A DNA MER1_type -1 188 51 * 325 280 25 45 chr2 37637565 37637722 -215618861 + MER5A DNA MER1_type 36 189 0 22 0 0 0 chr2 37637748 37637770 -215618813 + AT_rich Low_complexity Low_complexity 1 22 0 1690 132 22 4 chr2 37638666 37638939 -215617644 + L1MB7 LINE L1 5897 6174 -10 245 156 65 26 chr2 37640171 37640248 -215616335 + MER116 DNA Mariner 1 80 0 539 221 0 0 chr2 37640622 37640735 -215615848 + L1PB4 LINE L1 6031 6143 -13 507 285 19 32 chr2 37644044 37644202 -215612381 + MIR SINE MIR 2 157 -105 2382 77 0 3 chr2 37644267 37644566 -215612017 - AluY SINE Alu -13 298 1 316 344 72 0 chr2 37644964 37645089 -215611494 + L2 LINE L2 3133 3266 -6 251 293 0 0 chr2 37645744 37645819 -215610764 + (TA)n Simple_repeat Simple_repeat 2 76 0 8929 103 59 19 chr2 37648653 37650002 -215606581 + Tigger1 DNA MER2_type 893 2307 -111 1160 86 215 0 chr2 37650002 37650107 -215606476 + MER30 DNA MER1_type 1 82 -148 306 0 0 0 chr2 37650107 37650141 -215606442 + (CA)n Simple_repeat Simple_repeat 2 35 0 1160 86 215 0 chr2 37650141 37650221 -215606362 + MER30 DNA MER1_type 82 226 -4 8929 103 59 19 chr2 37650221 37650337 -215606246 + Tigger1 DNA MER2_type 2307 2417 -1 234 302 16 58 chr2 37651400 37651525 -215605058 + MIR SINE MIR 72 189 -67 5891 205 59 14 chr2 37651732 37652954 -215603629 - L1MB7 LINE L1 0 6184 5019 2038 126 34 7 chr2 37652954 37653247 -215603336 + AluSx SINE Alu 1 301 -11 5891 205 59 14 chr2 37653247 37654426 -215602157 - L1MB7 LINE L1 -1165 5019 3682 368 287 163 8 chr2 37654616 37654745 -215601838 + MIR SINE MIR 59 207 -55 183 156 0 0 chr2 37655084 37655116 -215601467 + T-rich Low_complexity Low_complexity 4 35 0 294 246 0 29 chr2 37656179 37656248 -215600335 - MIR SINE MIR -56 152 86 296 285 52 62 chr2 37659984 37660177 -215596406 - MIR SINE MIR -49 213 23 473 270 72 68 chr2 37661760 37662007 -215594576 - MIR SINE MIR -8 254 3 1032 288 50 30 chr2 37665683 37666187 -215590396 - MARNA DNA Mariner -30 556 43 384 297 30 6 chr2 37666044 37666209 -215590374 + MARNA DNA Mariner 397 565 -21 * 229 281 180 16 chr2 37668670 37668819 -215587764 - MIR SINE MIR -68 194 20 222 270 48 16 chr2 37669991 37670054 -215586529 - L2 LINE L2 -19 3294 3230 21 0 0 0 chr2 37670381 37670402 -215586181 + AT_rich Low_complexity Low_complexity 1 21 0 745 157 0 0 chr2 37671529 37671650 -215584933 + FLAM_C SINE Alu 23 143 0 22 35 0 0 chr2 37672229 37672258 -215584325 + AT_rich Low_complexity Low_complexity 1 29 0 201 108 0 0 chr2 37673840 37673877 -215582706 + (T)n Simple_repeat Simple_repeat 1 37 0 384 311 7 46 chr2 37676290 37676481 -215580102 + MIR3 SINE MIR 5 181 -61 670 298 83 5 chr2 37676644 37676862 -215579721 + MIR SINE MIR 4 238 -24 1359 305 156 48 chr2 37678037 37678425 -215578158 - L3 LINE CR1 -127 1450 1105 1549 197 0 17 chr2 37678425 37678719 -215577864 + AluJb SINE Alu 1 289 -23 1359 305 156 48 chr2 37678719 37679555 -215577028 - L3 LINE CR1 -472 1105 94 1913 168 0 10 chr2 37679817 37680127 -215576456 + AluJb SINE Alu 1 307 -5 219 381 0 0 chr2 37680905 37680989 -215575594 - L2 LINE L2 -1 3271 3188 686 236 52 48 chr2 37681599 37681828 -215574755 + MIR SINE MIR 4 233 -29 1726 174 3 14 chr2 37682260 37682554 -215574029 - AluJb SINE Alu -21 291 1 278 330 0 9 chr2 37683206 37683312 -215573271 + MIR3 SINE MIR 98 202 -6 1931 150 6 6 chr2 37683631 37683945 -215572638 - MER6 DNA MER2_type 0 865 552 * 3603 169 3 10 chr2 37683942 37684541 -215572042 - MER6 DNA MER2_type -57 808 214 198 0 0 0 chr2 37684541 37684563 -215572020 + (TC)n Simple_repeat Simple_repeat 1 22 0 1218 171 51 17 chr2 37684570 37684804 -215571779 - MER6 DNA MER2_type -623 242 1 1624 160 4 14 chr2 37685221 37685533 -215571050 - AluJo SINE Alu 0 317 9 187 308 111 26 chr2 37685806 37685923 -215570660 - L2 LINE L2 0 3272 3146 1767 148 7 43 chr2 37687620 37687924 -215568659 + AluSx SINE Alu 5 297 -15 1857 127 12 59 chr2 37689299 37689621 -215566962 - AluJb SINE Alu -5 307 1 195 69 0 0 chr2 37690226 37690255 -215566328 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 189 107 0 0 chr2 37690257 37690285 -215566298 + (TGGG)n Simple_repeat Simple_repeat 2 29 0 205 333 29 29 chr2 37692164 37692269 -215564314 + MIR3 SINE MIR 82 186 -22 199 206 0 0 chr2 37693194 37693228 -215563355 + L3 LINE CR1 1534 1567 -10 280 243 92 76 chr2 37695208 37695354 -215561229 + MIR SINE MIR 88 250 -12 2389 103 0 0 chr2 37700900 37701211 -215555372 + AluSx SINE Alu 1 311 -1 1369 120 5 0 chr2 37701336 37701527 -215555056 - AluSg/x SINE Alu -13 299 108 629 194 14 58 chr2 37702433 37702572 -215554011 + MER94 DNA DNA 1 133 -1 259 50 100 0 chr2 37702816 37702856 -215553727 - L1PA13 LINE L1 -1 6162 6119 36 40 0 0 chr2 37705520 37705570 -215551013 + AT_rich Low_complexity Low_complexity 1 50 0 23 33 0 0 chr2 37705775 37705805 -215550778 + AT_rich Low_complexity Low_complexity 1 30 0 418 282 62 48 chr2 37706268 37706477 -215550106 + MIR SINE MIR 9 220 -42 208 353 15 0 chr2 37709302 37709370 -215547213 + L2 LINE L2 3203 3271 -42 802 289 46 43 chr2 37710369 37710719 -215545864 - MARNA DNA Mariner -224 362 12 649 260 75 35 chr2 37711065 37711292 -215545291 + MIR SINE MIR 27 262 0 1537 174 27 54 chr2 37711697 37711991 -215544592 + AluJo SINE Alu 11 296 -16 591 162 15 49 chr2 37712317 37712784 -215543799 + GA-rich Low_complexity Low_complexity 1 451 0 538 145 31 49 chr2 37712799 37713128 -215543455 + GA-rich Low_complexity Low_complexity 1 323 0 634 171 28 17 chr2 37713460 37713636 -215542947 + GA-rich Low_complexity Low_complexity 2 179 0 1193 124 60 35 chr2 37714206 37714407 -215542176 - MER2 DNA MER2_type -139 206 1 2276 265 133 50 chr2 37717317 37718684 -215537899 - L2 LINE L2 -2 3311 1810 202 284 83 55 chr2 37719471 37719580 -215537003 + MIR SINE MIR 25 136 -72 268 251 123 16 chr2 37719774 37719896 -215536687 - MIR SINE MIR -60 148 40 368 270 110 0 chr2 37720585 37720685 -215535898 + L2 LINE L2 3159 3269 -3 304 270 120 30 chr2 37721239 37721339 -215535244 + MER5A DNA MER1_type 81 189 0 428 226 57 38 chr2 37721527 37721633 -215534950 + MIR SINE MIR 28 135 -127 296 217 83 0 chr2 37723745 37723805 -215532778 - L2 LINE L2 0 3313 3249 243 0 0 0 chr2 37725144 37725171 -215531412 + (T)n Simple_repeat Simple_repeat 1 27 0 189 402 36 9 chr2 37726268 37726380 -215530203 - L3 LINE CR1 -5 1572 1458 398 280 271 15 chr2 37726508 37726847 -215529736 - L3 LINE CR1 -159 1418 993 218 136 23 0 chr2 37728208 37728252 -215528331 + (TA)n Simple_repeat Simple_repeat 2 46 0 306 87 0 0 chr2 37728402 37728448 -215528135 + (TG)n Simple_repeat Simple_repeat 1 46 0 29 0 0 0 chr2 37728918 37728947 -215527636 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 37729270 37729295 -215527288 + AT_rich Low_complexity Low_complexity 1 25 0 25 0 0 0 chr2 37730056 37730081 -215526502 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr2 37734160 37734195 -215522388 + AT_rich Low_complexity Low_complexity 1 35 0 866 254 9 14 chr2 37734930 37735143 -215521440 + MIR SINE MIR 30 241 -21 26 30 0 0 chr2 37735170 37735203 -215521380 + AT_rich Low_complexity Low_complexity 1 33 0 217 223 268 62 chr2 37735580 37735692 -215520891 + MIR3 SINE MIR 33 167 -41 25 31 0 0 chr2 37735734 37735766 -215520817 + AT_rich Low_complexity Low_complexity 1 32 0 536 223 0 16 chr2 37736236 37736357 -215520226 + L2 LINE L2 3195 3313 0 1266 183 144 49 chr2 37740286 37740750 -215515833 + Charlie1b DNA MER1_type 1 521 -2 28 29 0 0 chr2 37741184 37741219 -215515364 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr2 37741895 37741918 -215514665 + (A)n Simple_repeat Simple_repeat 1 23 0 274 196 18 0 chr2 37742485 37742541 -215514042 + MIR SINE MIR 202 258 -4 314 262 16 57 chr2 37742803 37742925 -215513658 - L2 LINE L2 -38 3275 3159 275 400 65 29 chr2 37743526 37743939 -215512644 + L2 LINE L2 2532 2959 -355 803 224 18 70 chr2 37744126 37744354 -215512229 - MER20 DNA MER1_type -3 216 1 1927 57 0 0 chr2 37744504 37744734 -215511849 + AluY SINE Alu 66 295 -16 491 306 67 6 chr2 37745086 37745266 -215511317 + MIR3 SINE MIR 14 204 -4 201 133 0 0 chr2 37745308 37745338 -215511245 + (CA)n Simple_repeat Simple_repeat 2 31 0 214 301 84 0 chr2 37745458 37745541 -215511042 + L2 LINE L2 3168 3257 -15 2438 80 0 0 chr2 37745860 37746160 -215510423 + AluSx SINE Alu 1 300 -12 255 338 0 0 chr2 37746530 37746604 -215509979 + G-rich Low_complexity Low_complexity 3 76 0 22 35 0 0 chr2 37746722 37746751 -215509832 + AT_rich Low_complexity Low_complexity 1 29 0 498 259 13 44 chr2 37747467 37747625 -215508958 + MIR SINE MIR 110 262 0 26 0 0 0 chr2 37748421 37748447 -215508136 + AT_rich Low_complexity Low_complexity 1 26 0 23 92 0 0 chr2 37748748 37748813 -215507770 + AT_rich Low_complexity Low_complexity 1 65 0 1985 161 26 23 chr2 37748926 37749273 -215507310 - MER7A DNA MER2_type 0 346 1 2017 111 21 0 chr2 37749759 37750047 -215506536 + AluSx SINE Alu 1 294 -18 2218 100 0 28 chr2 37750104 37750425 -215506158 + AluSx SINE Alu 1 312 0 1101 229 9 22 chr2 37750859 37751086 -215505497 - MER58A DNA MER1_type 0 224 1 187 383 149 7 chr2 37751931 37752072 -215504511 - L2 LINE L2 -8 3264 3104 290 220 0 0 chr2 37752447 37752506 -215504077 - L2 LINE L2 -974 2340 2282 509 246 16 91 chr2 37753391 37753578 -215503005 + L2 LINE L2 3081 3246 -67 1525 181 49 17 chr2 37753578 37753865 -215502718 - AluJo SINE Alu -12 300 5 509 246 16 91 chr2 37753865 37753929 -215502654 + L2 LINE L2 3246 3313 0 2444 76 0 3 chr2 37754650 37754951 -215501632 - AluSx SINE Alu -12 300 1 2359 75 14 0 chr2 37755642 37755934 -215500649 - AluSp SINE Alu -17 296 1 2294 143 87 3 chr2 37757747 37758138 -215498445 + MSTA LTR MaLR 1 424 -4 1994 137 63 6 chr2 37758229 37758564 -215498019 + MLT1B LTR MaLR 37 390 0 1169 118 39 49 chr2 37759083 37759251 -215497332 + MLT1B LTR MaLR 3 170 -220 2025 119 20 3 chr2 37759251 37759546 -215497037 + AluSq SINE Alu 1 300 -13 1169 118 39 49 chr2 37759546 37759581 -215497002 + MLT1B LTR MaLR 170 204 -186 23 0 0 0 chr2 37760328 37760351 -215496232 + AT_rich Low_complexity Low_complexity 1 23 0 1154 279 63 18 chr2 37762410 37762808 -215493775 + LTR33 LTR ERVL 37 452 -69 1916 239 137 56 chr2 37763422 37764445 -215492138 + HAL1 LINE L1 1394 2499 -8 21 57 0 0 chr2 37764695 37764730 -215491853 + AT_rich Low_complexity Low_complexity 1 35 0 1992 129 28 0 chr2 37764737 37765024 -215491559 + AluJb SINE Alu 5 299 -13 1612 155 7 25 chr2 37765051 37765328 -215491255 + AluJo SINE Alu 13 284 -28 2437 80 3 0 chr2 37766409 37766708 -215489875 - AluSx SINE Alu -12 300 1 1130 164 51 0 chr2 37766865 37767060 -215489523 + MER2 DNA MER2_type 1 205 -140 22 56 0 0 chr2 37767381 37767417 -215489166 + AT_rich Low_complexity Low_complexity 1 36 0 210 262 195 27 chr2 37767466 37767615 -215488968 - L2 LINE L2 0 3272 3099 568 335 11 6 chr2 37767716 37767892 -215488691 + L3 LINE CR1 1400 1576 -1 1898 107 85 0 chr2 37768777 37769048 -215487535 + AluSx SINE Alu 2 295 -17 770 219 6 6 chr2 37769657 37769821 -215486762 - MIR SINE MIR -27 235 72 224 365 83 22 chr2 37770100 37770281 -215486302 + MIR3 SINE MIR 3 194 -14 1030 51 0 0 chr2 37770655 37770772 -215485811 - L1PA10 LINE L1 -8 6160 6044 1706 148 6 35 chr2 37770908 37771225 -215485358 + AluJo SINE Alu 5 312 0 1472 78 10 0 chr2 37771473 37771666 -215484917 - THE1A LTR MaLR 0 355 161 7914 91 5 4 chr2 37771666 37772718 -215483865 - THE1A-int LTR MaLR -527 1053 1 3080 59 3 0 chr2 37772718 37773072 -215483511 - THE1A LTR MaLR 0 355 1 2958 126 52 2 chr2 37773561 37774005 -215482578 - MER1A DNA MER1_type -62 467 2 1464 177 3 41 chr2 37774850 37775144 -215481439 - AluJb SINE Alu -25 287 5 426 327 75 66 chr2 37775569 37775918 -215480665 + L2 LINE L2 2921 3272 0 305 285 115 79 chr2 37776178 37776678 -215479905 + L1M2 LINE L1 663 1162 -5687 203 274 97 0 chr2 37777023 37777085 -215479498 + MIR SINE MIR 191 258 -4 861 116 41 14 chr2 37777187 37777334 -215479249 + L1MB3 LINE L1 6033 6183 0 1029 116 0 0 chr2 37777342 37777480 -215479103 + AluSq/x SINE Alu 1 138 -175 1590 138 127 75 chr2 37777480 37777906 -215478677 + LTR7 LTR ERV1 1 448 -2 19391 102 37 11 chr2 37777908 37780820 -215475763 + HERVH LTR ERV1 1 2987 -4726 880 149 20 0 chr2 37780814 37780962 -215475621 + HERVH LTR ERV1 3140 3290 -4423 * 3239 102 6 6 chr2 37780952 37781454 -215475129 + HERVH LTR ERV1 3492 3993 -3720 3986 153 3 1 chr2 37781456 37782117 -215474466 + HERVH LTR ERV1 4488 5149 -2564 1303 129 18 5 chr2 37782118 37782335 -215474248 + HERVH LTR ERV1 5600 5819 -1894 2376 71 45 13 chr2 37782335 37782713 -215473870 + HERVH LTR ERV1 7324 7713 0 1513 144 110 65 chr2 37782713 37783142 -215473441 + LTR7 LTR ERV1 1 448 -2 1537 65 0 0 chr2 37783175 37783360 -215473223 - AluY SINE Alu -126 185 1 2136 181 20 13 chr2 37785386 37785779 -215470804 - MSTD LTR MaLR 0 396 1 1013 166 18 12 chr2 37786127 37786290 -215470293 + FRAM SINE Alu 1 158 -18 2053 129 13 3 chr2 37787334 37787643 -215468940 + AluSx SINE Alu 1 312 0 1768 174 22 82 chr2 37788541 37788668 -215467915 + MLT1B LTR MaLR 1 134 -256 1895 115 6 88 chr2 37788668 37789008 -215467575 + AluSx SINE Alu 1 312 0 1768 174 22 82 chr2 37789008 37789295 -215467288 + MLT1B LTR MaLR 134 390 0 359 234 32 0 chr2 37792947 37793041 -215463542 + MER69 DNA AcHobo 1 97 -2429 577 215 35 0 chr2 37793045 37793189 -215463394 + MER69 DNA AcHobo 1941 2089 -437 1887 165 60 3 chr2 37793207 37793577 -215463006 - MER57A LTR ERV1 -3 400 10 482 209 45 8 chr2 37794108 37794242 -215462341 + MER69 DNA AcHobo 2118 2256 -270 738 141 0 16 chr2 37794248 37794369 -215462214 + AluJb SINE Alu 192 310 -2 2093 100 13 72 chr2 37794407 37794756 -215461827 - MER4E LTR ERV1 0 779 454 2191 109 7 13 chr2 37794756 37795059 -215461524 + AluSq SINE Alu 1 301 -12 2093 100 13 72 chr2 37795059 37795099 -215461484 - MER4E LTR ERV1 -325 454 413 3021 144 50 11 chr2 37795101 37795662 -215460921 - MER4D LTR ERV1 -320 583 1 722 202 121 9 chr2 37795662 37795884 -215460699 + MER69 DNA AcHobo 2279 2525 -1 2260 136 41 37 chr2 37795965 37796106 -215460477 - LTR23 LTR ERV1 0 437 298 2257 84 3 62 chr2 37796106 37796428 -215460155 - AluSp SINE Alu -10 303 1 2260 136 41 37 chr2 37796428 37796721 -215459862 - LTR23 LTR ERV1 -139 298 1 968 280 66 26 chr2 37796860 37797239 -215459344 + MLT1J2 LTR MaLR 45 438 -12 1813 119 85 58 chr2 37797439 37797767 -215458816 + MER1B DNA MER1_type 1 337 0 357 314 93 23 chr2 37797820 37797992 -215458591 + L3 LINE CR1 1377 1560 -17 2171 132 5 57 chr2 37798118 37798242 -215458341 + MSTC LTR MaLR 48 177 -251 2337 101 0 3 chr2 37798242 37798548 -215458035 + AluSx SINE Alu 2 306 -6 2171 132 5 57 chr2 37798548 37798825 -215457758 + MSTC LTR MaLR 177 428 0 206 234 0 21 chr2 37799891 37799938 -215456645 + GA-rich Low_complexity Low_complexity 1 46 0 621 226 48 12 chr2 37800939 37801107 -215455476 + MER58B DNA MER1_type 168 341 0 23 33 0 0 chr2 37801460 37801490 -215455093 + AT_rich Low_complexity Low_complexity 1 30 0 32 26 0 0 chr2 37801565 37801604 -215454979 + AT_rich Low_complexity Low_complexity 1 39 0 876 102 75 14 chr2 37802286 37802433 -215454150 + L1PA15 LINE L1 6004 6159 -6 323 256 125 22 chr2 37802449 37802644 -215453939 + L1M4 LINE L1 5209 5421 -756 1746 178 0 14 chr2 37802649 37802936 -215453647 + AluJo SINE Alu 11 293 -19 450 264 77 48 chr2 37802974 37803284 -215453299 - L1M4 LINE L1 -1095 5051 4733 2301 99 3 0 chr2 37803347 37803640 -215452943 - AluSg SINE Alu -16 294 1 1762 189 111 119 chr2 37803690 37804144 -215452439 - LTR8A LTR ERV1 -2 725 278 1190 21 0 0 chr2 37804144 37804284 -215452299 + L1PA2 LINE L1 6016 6155 0 1762 189 111 119 chr2 37804284 37804560 -215452023 - LTR8A LTR ERV1 -449 278 1 7263 170 83 45 chr2 37804562 37806690 -215449893 - HUERS-P1 LTR ERV1 -1 6262 3813 1267 191 0 9 chr2 37806708 37806928 -215449655 - AluJo SINE Alu -12 300 83 2801 135 2 22 chr2 37806928 37807425 -215449158 - HUERS-P1 LTR ERV1 -1614 3266 2780 3140 100 46 28 chr2 37807429 37807626 -215448957 + MER4B LTR ERV1 4 196 -583 2417 70 0 0 chr2 37807626 37807925 -215448658 + AluY SINE Alu 1 299 -12 3140 100 46 28 chr2 37807925 37808326 -215448257 + MER4B LTR ERV1 196 778 -1 2976 159 20 50 chr2 37808327 37809059 -215447524 - MER41-int LTR ERV1 -2654 3292 1843 267 140 20 0 chr2 37809109 37809159 -215447424 - MER34C LTR ERV1 -366 219 169 773 194 0 26 chr2 37809159 37809314 -215447269 - MER41-int LTR ERV1 -3225 2721 2571 2952 112 142 18 chr2 37809314 37809877 -215446706 + LTR10E LTR ERV1 1 633 0 4366 181 42 69 chr2 37809878 37810555 -215446028 - MER41-int LTR ERV1 -3439 2507 1813 2222 110 10 0 chr2 37810555 37810855 -215445728 - AluSx SINE Alu -9 303 1 4366 181 42 69 chr2 37810855 37811560 -215445023 - MER41-int LTR ERV1 -4133 1813 912 5387 116 22 14 chr2 37811560 37813050 -215443533 - L1PA16 LINE L1 -3 6163 4708 4366 181 42 69 chr2 37813050 37813192 -215443391 - MER41-int LTR ERV1 -5034 912 768 941 210 7 21 chr2 37813189 37813495 -215443088 - MER41-int LTR ERV1 -4466 1480 355 * 225 81 54 0 chr2 37813499 37813536 -215443047 - L1M4 LINE L1 -441 5733 5695 * 473 61 0 0 chr2 37813503 37813569 -215443014 - L1P4 LINE L1 -439 5727 5662 3472 214 50 43 chr2 37813572 37814523 -215442060 - MER41-int LTR ERV1 -4832 1431 474 1588 175 102 57 chr2 37814877 37815299 -215441284 - LTR8A LTR ERV1 0 727 287 14014 138 25 9 chr2 37815348 37817109 -215439474 + L1MA3 LINE L1 769 2579 -4986 3122 74 36 2 chr2 37817109 37817556 -215439027 + L1PA13 LINE L1 5696 6157 -6 14014 138 25 9 chr2 37817556 37818169 -215438414 + L1MA3 LINE L1 2579 3181 -4384 1321 201 25 11 chr2 37818177 37818451 -215438132 + AluJb SINE Alu 9 286 -26 15138 141 29 22 chr2 37818464 37818782 -215437801 + L1MA3 LINE L1 3168 3482 -4242 2155 113 17 10 chr2 37818782 37819084 -215437499 + AluSx SINE Alu 1 304 -8 15138 141 29 22 chr2 37819084 37819112 -215437471 + L1MA3 LINE L1 3482 3508 -4216 240 86 0 0 chr2 37819112 37819147 -215437436 + (CA)n Simple_repeat Simple_repeat 2 36 0 15138 141 29 22 chr2 37819147 37819501 -215437082 + L1MA3 LINE L1 3508 3858 -3866 408 55 0 0 chr2 37819501 37819556 -215437027 + (TA)n Simple_repeat Simple_repeat 1 55 0 15138 141 29 22 chr2 37819556 37821006 -215435577 + L1MA3 LINE L1 3858 5296 -2428 234 0 0 0 chr2 37821006 37821032 -215435551 + (CAA)n Simple_repeat Simple_repeat 2 27 0 15138 141 29 22 chr2 37821032 37823381 -215433202 + L1MA3 LINE L1 5296 7716 -8 461 211 55 45 chr2 37823383 37823542 -215433041 - LTR8 LTR ERV1 -387 154 1 269 170 0 0 chr2 37823583 37823630 -215432953 + L1ME LINE L1 5544 5590 -531 2473 34 20 7 chr2 37823913 37824207 -215432376 + AluY SINE Alu 1 298 -13 261 314 41 8 chr2 37824213 37824334 -215432249 - LTR33A LTR ERVL -102 421 297 255 267 156 0 chr2 37824471 37824561 -215432022 - LTR33A LTR ERVL -361 162 59 22 80 0 0 chr2 37824647 37824697 -215431886 + AT_rich Low_complexity Low_complexity 1 50 0 678 303 76 16 chr2 37824798 37825115 -215431468 + MLT1I LTR MaLR 74 409 0 725 188 23 0 chr2 37825313 37825446 -215431137 + Tigger3(Golem) DNA MER2_type 1 136 -2893 4634 133 50 12 chr2 37825456 37826290 -215430293 + Tigger3(Golem) DNA MER2_type 2163 3028 -1 223 197 79 26 chr2 37826293 37826369 -215430214 + MIR SINE MIR 183 262 0 2066 144 71 9 chr2 37827129 37827523 -215429060 - MSTB1 LTR MaLR -21 411 1 1956 137 7 13 chr2 37827554 37827883 -215428700 - AluSx SINE Alu 0 312 1 375 248 120 0 chr2 37828992 37829109 -215427474 - MIR SINE MIR -14 248 118 337 296 65 69 chr2 37829299 37829468 -215427115 + L1MC/D LINE L1 5556 5725 -2083 1626 187 3 38 chr2 37829468 37829784 -215426799 + AluJb SINE Alu 1 305 -7 337 296 65 69 chr2 37829784 37829874 -215426709 + L1MC/D LINE L1 5725 5814 -1994 466 365 108 8 chr2 37830403 37830773 -215425810 + HAL1b LINE L1 429 835 -513 2465 217 83 39 chr2 37830773 37831612 -215424971 + L1ME2 LINE L1 4992 5889 -275 1478 201 14 21 chr2 37831612 37831895 -215424688 + AluJo SINE Alu 21 301 -11 2465 217 83 39 chr2 37831895 37832174 -215424409 + L1ME2 LINE L1 5889 6154 -10 453 305 16 56 chr2 37832747 37832996 -215423587 + L1M4 LINE L1 2154 2392 -3754 335 257 46 0 chr2 37833002 37833111 -215423472 + MER3 DNA MER1_type 43 156 -53 2268 101 0 22 chr2 37833476 37833793 -215422790 + AluSx SINE Alu 1 310 -2 1714 181 86 0 chr2 37835595 37835932 -215420651 - MER47A DNA MER2_type 0 366 1 244 242 16 16 chr2 37836471 37836533 -215420050 - L2 LINE L2 -1 3271 3210 495 243 52 37 chr2 37836994 37837130 -215419453 + MIR3 SINE MIR 33 170 -38 540 305 176 0 chr2 37837475 37837685 -215418898 - MIR SINE MIR -5 257 11 221 136 0 23 chr2 37837719 37837763 -215418820 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 28 61 0 0 chr2 37837792 37837841 -215418742 + AT_rich Low_complexity Low_complexity 1 49 0 3673 151 39 5 chr2 37838937 37839607 -215416976 - L1MB2 LINE L1 -39 6132 5440 1699 222 35 61 chr2 37839734 37840029 -215416554 + L1ME3 LINE L1 5587 5888 -274 1868 164 0 13 chr2 37840029 37840327 -215416256 + AluJb SINE Alu 1 294 -18 1699 222 35 61 chr2 37840327 37840366 -215416217 + L1ME3 LINE L1 5888 5926 -236 1713 156 51 27 chr2 37840366 37840700 -215415883 + MER2 DNA MER2_type 1 342 -2 1699 222 35 61 chr2 37840700 37840935 -215415648 + L1ME3 LINE L1 5926 6142 -20 204 40 0 0 chr2 37841037 37841062 -215415521 + (A)n Simple_repeat Simple_repeat 1 25 0 688 138 0 48 chr2 37841139 37841284 -215415299 + SVA Other Other 424 561 -825 1002 273 109 35 chr2 37842094 37842781 -215413802 + L2 LINE L2 2572 3303 -10 381 273 10 10 chr2 37843237 37843336 -215413247 + MER58 DNA MER1_type 1 99 -116 240 35 0 0 chr2 37843337 37843366 -215413217 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 353 192 27 0 chr2 37843372 37843445 -215413138 + MER58 DNA MER1_type 2346 2420 0 398 338 46 27 chr2 37843783 37844046 -215412537 + MLT1J LTR MaLR 1 268 -243 298 264 23 0 chr2 37844310 37844397 -215412186 - MER58C DNA MER1_type -10 205 117 337 148 30 1 chr2 37844579 37844648 -215411935 - MER58 DNA MER1_type -10 2410 2342 216 0 0 0 chr2 37844648 37844672 -215411911 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4502 147 28 33 chr2 37844758 37845006 -215411577 + L1MA9 LINE L1 5433 5681 -631 1653 149 36 29 chr2 37845006 37845281 -215411302 - AluJo SINE Alu -35 277 1 4502 147 28 33 chr2 37845281 37845770 -215410813 + L1MA9 LINE L1 5681 6168 -144 378 0 0 0 chr2 37845770 37845812 -215410771 + (CA)n Simple_repeat Simple_repeat 1 42 0 4502 147 28 33 chr2 37845812 37845952 -215410631 + L1MA9 LINE L1 6168 6307 -5 670 313 48 57 chr2 37846157 37846835 -215409748 - L2 LINE L2 -1 3271 2599 276 309 88 29 chr2 37846841 37847181 -215409402 - L1M4 LINE L1 -1300 4846 4487 2021 109 12 70 chr2 37847281 37847611 -215408972 - AluSx SINE Alu -1 311 1 201 39 0 0 chr2 37848113 37848139 -215408444 + (CA)n Simple_repeat Simple_repeat 2 27 0 244 366 36 36 chr2 37848649 37848870 -215407713 + L3 LINE CR1 57 277 -1300 226 327 131 0 chr2 37849361 37849468 -215407115 + L3 LINE CR1 1440 1560 -17 188 308 0 15 chr2 37849494 37849559 -215407024 - L2 LINE L2 -208 3064 3001 340 232 12 0 chr2 37849647 37849729 -215406854 + LTR67 LTR ERVL 453 535 -22 263 269 0 0 chr2 37851514 37851581 -215405002 - L3 LINE CR1 -346 1231 1165 882 306 47 59 chr2 37852582 37853072 -215403511 - L1MEd LINE L1 -5513 606 123 408 253 100 0 chr2 37853208 37853378 -215403205 - L1ME LINE L1 -342 5779 5593 4239 151 21 11 chr2 37853769 37854569 -215402014 + L1MB7 LINE L1 5366 6173 -11 878 312 69 14 chr2 37856334 37856824 -215399759 - L2 LINE L2 -1080 2234 1718 887 121 34 0 chr2 37856824 37856973 -215399610 - L1MA4 LINE L1 -99 6201 6048 774 282 74 33 chr2 37856977 37857941 -215398642 - L1ME LINE L1 -4678 1583 537 2388 71 0 10 chr2 37857972 37858268 -215398315 - AluY SINE Alu -13 298 6 429 340 25 25 chr2 37858534 37858890 -215397693 - L1ME LINE L1 -5619 451 96 5069 143 29 16 chr2 37858897 37859783 -215396800 - L1MC1 LINE L1 0 6333 5436 401 338 98 61 chr2 37860999 37861585 -215394998 - L2 LINE L2 0 3272 2591 1688 198 13 16 chr2 37861585 37861958 -215394625 + L1MB7 LINE L1 5794 6165 -19 1790 171 5 63 chr2 37862133 37862530 -215394053 - MLT1A2 LTR MaLR 0 374 1 660 291 88 4 chr2 37863736 37863963 -215392620 + MIR SINE MIR 16 261 -1 397 270 64 32 chr2 37864345 37864518 -215392065 - L1ME LINE L1 -448 5673 5495 237 33 0 0 chr2 37864645 37864675 -215391908 + (TG)n Simple_repeat Simple_repeat 2 31 0 25 31 0 0 chr2 37864737 37864769 -215391814 + AT_rich Low_complexity Low_complexity 1 32 0 731 158 0 8 chr2 37865471 37865591 -215390992 + FLAM_C SINE Alu 12 130 -13 23 33 0 0 chr2 37865626 37865656 -215390927 + AT_rich Low_complexity Low_complexity 1 30 0 334 314 26 16 chr2 37865737 37865926 -215390657 - L1ME LINE L1 -2004 4142 3952 227 265 162 8 chr2 37865965 37866082 -215390501 - MIR SINE MIR -50 212 78 906 245 15 8 chr2 37866198 37866459 -215390124 - L1MD3 LINE L1 -12 7983 7721 3912 123 86 91 chr2 37866459 37867847 -215388736 + pTR5 LTR ERV1 66 2438 0 2960 205 77 24 chr2 37867847 37868728 -215387855 - L1MC4 LINE L1 -410 7632 6705 288 0 0 0 chr2 37868729 37868761 -215387822 + (CA)n Simple_repeat Simple_repeat 2 33 0 430 327 0 0 chr2 37868771 37868936 -215387647 - L1M4 LINE L1 -1931 4215 4051 386 269 40 17 chr2 37868938 37869113 -215387470 - L1M4 LINE L1 -2028 4118 3940 494 321 83 12 chr2 37869476 37869728 -215386855 + L1MEc LINE L1 2125 2394 -4002 560 313 14 15 chr2 37869805 37870051 -215386532 + MLT1H LTR MaLR 81 314 -95 841 301 64 35 chr2 37871704 37871853 -215384730 - L2 LINE L2 -2 3311 3168 2387 61 0 0 chr2 37871853 37872148 -215384435 + AluY SINE Alu 1 295 -16 841 301 64 35 chr2 37872148 37872374 -215384209 - L2 LINE L2 -145 3168 2925 595 146 54 0 chr2 37872712 37872842 -215383741 - L1MB4 LINE L1 0 6180 6044 642 284 54 27 chr2 37872961 37873183 -215383400 + MIR SINE MIR 21 248 -14 2280 80 0 7 chr2 37873194 37873505 -215383078 - AluSx SINE Alu 0 310 2 180 0 0 0 chr2 37875016 37875036 -215381547 + (A)n Simple_repeat Simple_repeat 1 20 0 198 143 0 0 chr2 37875100 37875135 -215381448 + (TG)n Simple_repeat Simple_repeat 1 35 0 274 347 55 15 chr2 37876797 37876981 -215379602 + MIR SINE MIR 1 141 -67 2287 78 3 0 chr2 37877042 37877356 -215379227 + AluSq SINE Alu 1 315 0 306 291 87 0 chr2 37877587 37877690 -215378893 + MIR3 SINE MIR 93 204 -4 186 133 0 0 chr2 37877897 37877927 -215378656 + (TA)n Simple_repeat Simple_repeat 1 30 0 495 96 0 0 chr2 37877966 37878049 -215378534 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 500 260 0 0 chr2 37878237 37878372 -215378211 + MIR SINE MIR 50 183 -63 222 171 0 0 chr2 37878754 37878795 -215377788 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1701 176 22 0 chr2 37878840 37879118 -215377465 + AluJo SINE Alu 1 284 -28 207 0 0 0 chr2 37879121 37879144 -215377439 + (TAA)n Simple_repeat Simple_repeat 2 24 0 967 254 17 4 chr2 37879147 37879383 -215377200 - MIR SINE MIR -8 254 16 526 283 225 19 chr2 37880257 37880631 -215375952 - L2 LINE L2 -12 3301 2851 2178 101 20 3 chr2 37882300 37882606 -215373977 - AluSx SINE Alu -1 311 1 356 325 102 6 chr2 37882609 37882766 -215373817 + MIR SINE MIR 91 262 0 1067 205 5 45 chr2 37884194 37884418 -215372165 - MER20 DNA MER1_type -4 215 1 184 167 0 0 chr2 37885317 37885353 -215371230 + MIR SINE MIR 81 116 -92 247 222 124 81 chr2 37885558 37885743 -215370840 - MLT1L LTR MaLR -65 550 358 378 248 35 55 chr2 37885898 37886100 -215370483 - MLT1L LTR MaLR -410 205 8 253 261 29 0 chr2 37886238 37886307 -215370276 + A-rich Low_complexity Low_complexity 4 74 0 348 255 20 41 chr2 37887188 37887248 -215369335 + MER5B DNA MER1_type 1 60 -118 2258 117 0 0 chr2 37887248 37887548 -215369035 + AluSx SINE Alu 1 300 -12 348 255 20 41 chr2 37887548 37887585 -215368998 + MER5B DNA MER1_type 60 96 -82 643 243 164 9 chr2 37887614 37887840 -215368743 + MIR SINE MIR 1 261 -1 313 314 83 54 chr2 37888060 37888410 -215368173 - L2 LINE L2 -340 2974 2615 491 203 68 0 chr2 37888777 37888790 -215367793 - L1MA10 LINE L1 -40 6294 6282 2673 200 26 64 chr2 37888790 37889481 -215367102 - L1ME1 LINE L1 -44 6122 5458 352 252 153 0 chr2 37889825 37889936 -215366647 + MIR SINE MIR 20 147 -115 278 258 43 54 chr2 37889985 37890078 -215366505 - L2 LINE L2 0 3313 3222 326 78 31 31 chr2 37890872 37890936 -215365647 - L1MB8 LINE L1 -3 6175 6112 2160 86 7 0 chr2 37890937 37891217 -215365366 + AluSg SINE Alu 1 282 -28 245 207 0 0 chr2 37891221 37891274 -215365309 - L1MB7 LINE L1 -44 6134 6082 1790 229 48 47 chr2 37891338 37892158 -215364425 - L2 LINE L2 -3 3269 2455 614 211 100 39 chr2 37892679 37892859 -215363724 - MER63A DNA MER1_type -19 191 1 605 191 140 22 chr2 37892955 37893091 -215363492 - MER97c DNA MER1_type? -911 179 28 293 180 57 67 chr2 37893101 37893205 -215363378 + MIR SINE MIR 47 163 -62 262 370 24 6 chr2 37893357 37893522 -215363061 + L2 LINE L2 2914 3081 -191 2199 114 3 0 chr2 37893640 37893939 -215362644 + AluSg1 SINE Alu 3 302 -7 735 212 22 54 chr2 37893963 37894147 -215362436 - MER5B DNA MER1_type 0 178 1 242 285 97 56 chr2 37894212 37894356 -215362227 + L2 LINE L2 3160 3309 -4 2488 88 0 0 chr2 37895247 37895555 -215361028 - AluSg SINE Alu -2 308 1 1935 78 51 31 chr2 37895563 37895715 -215360868 - AluY SINE Alu -12 299 152 549 0 0 0 chr2 37895715 37895776 -215360807 + (TG)n Simple_repeat Simple_repeat 2 62 0 1935 78 51 31 chr2 37895776 37895916 -215360667 - AluY SINE Alu -159 152 1 2911 153 9 13 chr2 37896155 37896620 -215359963 - MLT1C LTR MaLR -4 463 1 332 293 47 47 chr2 37896726 37896832 -215359751 + MIR SINE MIR 17 122 -86 5608 135 23 39 chr2 37897563 37898037 -215358546 + L1MA9 LINE L1 3984 4464 -1682 1588 185 0 11 chr2 37898037 37898323 -215358260 + AluJb SINE Alu 1 283 -29 5608 135 23 39 chr2 37898323 37898861 -215357722 + L1MA9 LINE L1 4464 4980 -1166 2964 127 46 40 chr2 37898861 37899107 -215357476 + L1MA9 LINE L1 5784 6027 -285 2138 128 0 3 chr2 37899107 37899404 -215357179 + AluSq SINE Alu 1 296 -17 2964 127 46 40 chr2 37899404 37899672 -215356911 + L1MA9 LINE L1 6027 6307 -5 285 323 201 38 chr2 37900044 37900413 -215356170 + L2 LINE L2 2842 3270 -2 299 322 120 33 chr2 37900624 37900807 -215355776 + MIR3 SINE MIR 1 199 -9 47 78 0 0 chr2 37901289 37901392 -215355191 + AT_rich Low_complexity Low_complexity 1 103 0 809 299 75 9 chr2 37901633 37901978 -215354605 - L1ME LINE L1 -399 5722 5355 1090 190 62 0 chr2 37902135 37902346 -215354237 + AluJo SINE Alu 86 309 -3 1677 82 0 0 chr2 37902402 37902610 -215353973 - AluSq SINE Alu -16 297 90 1849 175 13 60 chr2 37903638 37904021 -215352562 - MLT1A1 LTR MaLR 0 365 1 2129 116 10 0 chr2 37904171 37904465 -215352118 + AluSx SINE Alu 2 298 -14 382 227 64 39 chr2 37904607 37904810 -215351773 + L1ME4a LINE L1 5772 5979 -142 2012 101 87 3 chr2 37904941 37905229 -215351354 + AluSx SINE Alu 1 312 0 241 333 11 11 chr2 37905659 37905749 -215350834 + (CA)n Simple_repeat Simple_repeat 1 90 0 1521 150 84 60 chr2 37906050 37906314 -215350269 + Tigger3(Golem) DNA MER2_type 1 276 -2753 2269 101 0 7 chr2 37906314 37906611 -215349972 - AluSx SINE Alu -17 295 1 1521 150 84 60 chr2 37906611 37906679 -215349904 + Tigger3(Golem) DNA MER2_type 276 341 -2688 4296 121 19 15 chr2 37906685 37906912 -215349671 + Tigger3(Golem) DNA MER2_type 2340 2565 -463 2884 10 0 0 chr2 37906912 37907223 -215349360 + AluYa5 SINE Alu 1 311 0 4296 121 19 15 chr2 37907223 37907681 -215348902 + Tigger3(Golem) DNA MER2_type 2565 3028 0 27 49 0 0 chr2 37907755 37907796 -215348787 + AT_rich Low_complexity Low_complexity 1 41 0 1106 243 150 57 chr2 37908355 37908394 -215348189 - MLT1J LTR MaLR 0 511 477 1918 134 33 16 chr2 37908394 37908700 -215347883 + AluSx SINE Alu 1 311 -1 1106 243 150 57 chr2 37908700 37908923 -215347660 - MLT1J LTR MaLR -34 477 276 3309 188 24 16 chr2 37908923 37909552 -215347031 - LTR27 LTR ERV1 0 636 3 1106 243 150 57 chr2 37909552 37909648 -215346935 - MLT1J LTR MaLR -235 276 190 2300 71 0 4 chr2 37909648 37909953 -215346630 - AluSc SINE Alu 0 304 1 1106 243 150 57 chr2 37909953 37910044 -215346539 - MLT1J LTR MaLR -321 190 17 753 325 90 38 chr2 37910984 37911430 -215345153 - L2 LINE L2 0 3272 2804 263 266 0 0 chr2 37911495 37911559 -215345024 - MLT1K LTR MaLR -11 577 514 315 130 0 0 chr2 37911689 37911743 -215344840 + (TC)n Simple_repeat Simple_repeat 1 54 0 241 330 19 19 chr2 37912303 37912396 -215344187 - L2 LINE L2 -559 2755 2660 804 167 107 6 chr2 37912396 37912564 -215344019 + MER5A DNA MER1_type 1 185 -4 241 330 19 19 chr2 37912564 37912576 -215344007 - L2 LINE L2 -653 2661 2650 246 266 0 25 chr2 37913081 37913160 -215343423 + T-rich Low_complexity Low_complexity 3 79 0 2270 89 10 0 chr2 37913279 37913571 -215343012 + AluSx SINE Alu 18 312 0 324 188 232 0 chr2 37915174 37915243 -215341340 - Tigger5 DNA MER2_type -2 2321 2237 338 173 0 0 chr2 37915256 37915308 -215341275 - Tigger5 DNA MER2_type -2271 52 1 185 349 81 0 chr2 37915506 37915592 -215340991 - L2 LINE L2 -227 3045 2953 217 289 0 0 chr2 37916457 37916509 -215340074 + (CA)n Simple_repeat Simple_repeat 1 52 0 253 279 155 23 chr2 37916673 37916802 -215339781 + MIR SINE MIR 46 191 -71 416 97 0 16 chr2 37916959 37917021 -215339562 - L2 LINE L2 -69 3244 3184 24 0 0 0 chr2 37917554 37917578 -215339005 + AT_rich Low_complexity Low_complexity 1 24 0 811 280 182 18 chr2 37920070 37920509 -215336074 - L3 LINE CR1 -4 1573 1063 664 263 138 36 chr2 37921739 37922211 -215334372 - L1MEc LINE L1 -4731 1665 1146 * 15864 201 31 12 chr2 37922184 37927080 -215329503 - L1PA16 LINE L1 -2 6233 1251 487 305 48 1 chr2 37927094 37927330 -215329253 - L1PA16 LINE L1 -6558 280 1 514 296 77 25 chr2 37927882 37928078 -215328505 - MIR SINE MIR -44 218 13 2403 94 0 0 chr2 37928926 37929225 -215327358 + AluSg SINE Alu 6 304 -6 212 313 50 0 chr2 37929269 37929349 -215327234 - MIR SINE MIR -82 180 97 899 122 15 0 chr2 37929358 37929489 -215327094 + AluSq/x SINE Alu 1 133 -179 2173 128 0 0 chr2 37929494 37929792 -215326791 + AluSx SINE Alu 1 298 -14 4989 76 6 5 chr2 37931140 37931769 -215324814 + L1PA11 LINE L1 5545 6174 0 250 304 86 58 chr2 37932227 37932481 -215324102 + MIR SINE MIR 3 262 0 1097 256 106 20 chr2 37933831 37934336 -215322247 - L1MC4a LINE L1 -443 7365 6882 2351 83 0 0 chr2 37934336 37934638 -215321945 - AluSp SINE Alu -11 302 1 1097 256 106 20 chr2 37934638 37934705 -215321878 - L1MC4a LINE L1 -926 6882 6822 358 308 0 53 chr2 37936557 37936690 -215319893 - L2 LINE L2 0 3313 3188 464 268 106 7 chr2 37938177 37938319 -215318264 - MIR SINE MIR -10 252 97 2296 94 0 0 chr2 37938364 37938673 -215317910 - AluSc SINE Alu 0 309 1 2276 76 0 7 chr2 37939839 37940140 -215316443 + AluSc SINE Alu 1 299 -10 355 220 55 11 chr2 37940261 37940352 -215316231 - MIR SINE MIR -84 178 84 250 242 0 32 chr2 37940783 37940845 -215315738 - L2 LINE L2 0 3272 3213 312 292 40 11 chr2 37941536 37941646 -215314937 + MER5A DNA MER1_type 63 164 -14 2035 108 3 0 chr2 37941964 37942251 -215314332 - AluSp SINE Alu -7 306 19 1971 211 15 66 chr2 37943391 37943630 -215312953 + MLT1D LTR MaLR 1 251 -254 2121 128 77 8 chr2 37943630 37943795 -215312788 - THE1C LTR MaLR 0 375 223 276 30 0 0 chr2 37943795 37943828 -215312755 + (GA)n Simple_repeat Simple_repeat 1 33 0 2121 128 77 8 chr2 37943828 37944013 -215312570 - THE1C LTR MaLR -152 223 1 1971 211 15 66 chr2 37944013 37944305 -215312278 + MLT1D LTR MaLR 251 505 0 1587 181 7 13 chr2 37944627 37944926 -215311657 + AluJo SINE Alu 1 297 -15 309 186 17 0 chr2 37944954 37945013 -215311570 - MIR SINE MIR -102 160 101 207 214 79 67 chr2 37945317 37945406 -215311177 + L2 LINE L2 3171 3260 -12 215 437 34 8 chr2 37946177 37946296 -215310287 - L3b LINE CR1 -22 1561 1440 2066 123 0 0 chr2 37946530 37946832 -215309751 + AluSx SINE Alu 1 302 -10 722 263 9 60 chr2 37946840 37947057 -215309526 - MIR SINE MIR -21 241 36 282 257 10 79 chr2 37947232 37947333 -215309250 - MIR SINE MIR -58 204 111 863 188 24 28 chr2 37948042 37948255 -215308328 - L1MB7 LINE L1 0 6184 5973 419 228 20 20 chr2 37948515 37948616 -215307967 - L2 LINE L2 0 3313 3213 265 230 57 98 chr2 37949502 37949629 -215306954 + L1ME LINE L1 5279 5410 -711 2138 117 7 0 chr2 37949629 37949936 -215306647 + AluSg SINE Alu 2 310 0 265 230 57 98 chr2 37949936 37950104 -215306479 + L1ME LINE L1 5410 5665 -456 1741 118 3 38 chr2 37950505 37950646 -215305937 + AluJo SINE Alu 1 128 -184 2102 96 7 0 chr2 37950646 37950937 -215305646 + AluSp SINE Alu 12 304 -9 1741 118 3 38 chr2 37950937 37951083 -215305500 + AluJo SINE Alu 128 278 -34 185 65 32 0 chr2 37951088 37951119 -215305464 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 26 0 0 27 chr2 37951831 37951843 -215304740 + AT_rich Low_complexity Low_complexity 1 12 -24 1760 102 84 7 chr2 37951843 37952117 -215304466 + AluSx SINE Alu 1 295 -17 26 0 0 27 chr2 37952117 37952141 -215304442 + AT_rich Low_complexity Low_complexity 12 36 0 262 362 43 21 chr2 37954371 37954512 -215302071 - L3 LINE CR1 -1 1576 1433 253 125 0 0 chr2 37954592 37954624 -215301959 + Charlie1 DNA MER1_type 1 32 -2729 1016 185 68 136 chr2 37954645 37954899 -215301684 + Charlie1 DNA MER1_type 2343 2613 -148 1920 128 21 0 chr2 37954899 37955188 -215301395 + AluSx SINE Alu 1 295 -17 2379 61 3 6 chr2 37955189 37955500 -215301083 + AluY SINE Alu 1 310 -1 1016 185 68 136 chr2 37955500 37955669 -215300914 + Charlie1 DNA MER1_type 2612 2739 -22 915 324 138 18 chr2 37955691 37956320 -215300263 - L3 LINE CR1 -304 1273 569 210 309 36 0 chr2 37956504 37956559 -215300024 - L2 LINE L2 -15 3257 3201 532 246 273 0 chr2 37957591 37957778 -215298805 + MIR SINE MIR 11 248 -14 1870 94 30 11 chr2 37957834 37958100 -215298483 - L1PA11 LINE L1 -1 6173 5903 495 281 16 0 chr2 37958881 37959002 -215297581 - MIR3 SINE MIR -42 166 44 217 224 12 12 chr2 37959179 37959264 -215297319 + GA-rich Low_complexity Low_complexity 4 88 0 204 327 0 0 chr2 37959590 37959642 -215296941 + MIR SINE MIR 204 255 -7 409 314 51 29 chr2 37959679 37959854 -215296729 + L3 LINE CR1 1387 1565 -12 22 0 0 0 chr2 37961547 37961569 -215295014 + AT_rich Low_complexity Low_complexity 1 22 0 333 320 176 40 chr2 37961916 37962593 -215293990 - L2 LINE L2 -542 2772 2004 293 245 75 21 chr2 37962641 37962735 -215293848 + MER5B DNA MER1_type 1 99 -79 360 196 0 54 chr2 37962744 37962832 -215293751 + MER5A DNA MER1_type 4 85 -104 286 233 278 0 chr2 37963607 37963697 -215292886 - MER5A DNA MER1_type -6 183 69 477 240 25 16 chr2 37965915 37966036 -215290547 + MIR3 SINE MIR 33 154 -54 535 280 97 11 chr2 37967542 37967728 -215288855 + MIR3 SINE MIR 4 205 -3 209 230 108 0 chr2 37968129 37968203 -215288380 - MIR3 SINE MIR -11 197 116 225 192 24 0 chr2 37968974 37969033 -215287550 - MIR SINE MIR -87 121 59 2205 183 34 28 chr2 37969770 37970272 -215286311 + MLT1D LTR MaLR 1 505 0 563 242 0 24 chr2 37970425 37970549 -215286034 + MER5B DNA MER1_type 8 128 -50 245 252 38 137 chr2 37970442 37970573 -215286010 - MER5A DNA MER1_type -24 165 48 * 755 242 13 0 chr2 37970935 37971092 -215285491 + MER5B DNA MER1_type 13 171 -7 22 0 0 0 chr2 37971285 37971307 -215285276 + AT_rich Low_complexity Low_complexity 1 22 0 467 238 252 0 chr2 37971325 37971476 -215285107 + MER5A DNA MER1_type 1 189 0 222 276 75 52 chr2 37972537 37972671 -215283912 - L3 LINE CR1 -187 1390 1254 226 344 0 16 chr2 37973098 37973159 -215283424 - L3b LINE CR1 -10 1573 1514 1882 204 23 72 chr2 37973523 37973723 -215282860 - MER82 DNA MER2_type 0 653 445 2021 63 0 26 chr2 37973723 37974076 -215282507 - AluSq SINE Alu 0 365 20 1882 204 23 72 chr2 37974076 37974349 -215282234 - MER82 DNA MER2_type -208 445 202 21 0 0 0 chr2 37974488 37974509 -215282074 + AT_rich Low_complexity Low_complexity 1 21 0 1034 198 0 29 chr2 37974651 37974858 -215281725 - MER82 DNA MER2_type -452 201 1 688 135 0 0 chr2 37975050 37975146 -215281437 - AluJ/FLAM SINE Alu -215 97 2 23 33 0 0 chr2 37975317 37975347 -215281236 + AT_rich Low_complexity Low_complexity 1 30 0 416 186 62 44 chr2 37975527 37975640 -215280943 - MER69A DNA AcHobo -1 176 62 388 304 179 29 chr2 37975725 37976211 -215280372 - L2 LINE L2 -677 2637 2079 1971 128 0 13 chr2 37976855 37977160 -215279423 + AluSg SINE Alu 1 301 -9 1583 183 3 17 chr2 37977811 37978112 -215278471 + AluJo SINE Alu 1 297 -15 2045 121 3 0 chr2 37978146 37978444 -215278139 + AluSx SINE Alu 1 299 -13 2265 101 0 0 chr2 37978445 37978751 -215277832 + AluSg SINE Alu 1 306 -4 694 148 0 101 chr2 37978784 37978933 -215277650 - MER45A DNA AcHobo -44 134 1 293 204 93 0 chr2 37979420 37979501 -215277082 - MIR SINE MIR -75 133 40 1652 126 112 7 chr2 37979906 37980183 -215276400 + AluSg1 SINE Alu 1 306 -3 246 274 128 34 chr2 37981174 37981291 -215275292 - LTR67 LTR ERVL -6 551 424 266 291 11 54 chr2 37981647 37981760 -215274823 - LTR67 LTR ERVL -363 194 37 378 143 29 43 chr2 37982374 37982444 -215274139 + MER81 DNA DNA 41 109 -5 409 256 8 53 chr2 37982572 37982705 -215273878 - MIR3 SINE MIR -79 129 3 2253 98 0 0 chr2 37982930 37983226 -215273357 + AluSc SINE Alu 1 296 -13 503 128 84 2 chr2 37983297 37983390 -215273193 + L1MB4 LINE L1 6046 6151 -29 1913 156 0 3 chr2 37983401 37983708 -215272875 + AluJb SINE Alu 1 306 -6 240 35 0 0 chr2 37984379 37984408 -215272175 + (CA)n Simple_repeat Simple_repeat 1 29 0 228 241 13 63 chr2 37984627 37984706 -215271877 + MIR3 SINE MIR 128 202 -6 2126 99 27 3 chr2 37984923 37985097 -215271486 - AluSc SINE Alu -8 301 116 188 0 74 0 chr2 37985097 37985124 -215271459 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2126 99 27 3 chr2 37985124 37985243 -215271340 - AluSc SINE Alu -193 116 1 1895 146 11 0 chr2 37987792 37988095 -215268488 - AluSx SINE Alu 0 306 1 1164 135 0 0 chr2 37988226 37988389 -215268194 + FRAM SINE Alu 2 164 -12 2188 98 3 3 chr2 37988390 37988685 -215267898 + AluSp SINE Alu 1 295 -18 2094 143 0 0 chr2 37989013 37989314 -215267269 - AluSx SINE Alu -11 301 1 338 286 246 6 chr2 37989835 37990006 -215266577 + L3 LINE CR1 1318 1529 -48 2399 101 0 9 chr2 37990040 37990356 -215266227 - AluSq SINE Alu 0 313 1 330 284 104 83 chr2 37990911 37991229 -215265354 + L2 LINE L2 1560 1870 -1444 1623 151 76 14 chr2 37991229 37991520 -215265063 - AluSc SINE Alu 0 309 1 330 284 104 83 chr2 37991520 37991548 -215265035 + L2 LINE L2 1870 1896 -1418 2175 124 3 0 chr2 37991548 37991846 -215264737 + AluSx SINE Alu 1 299 -13 330 284 104 83 chr2 37991846 37991942 -215264641 + L2 LINE L2 1896 2012 -1302 285 333 63 0 chr2 37991954 37992065 -215264518 + L3 LINE CR1 1459 1576 -1 1976 125 21 0 chr2 37993440 37993721 -215262862 + AluSx SINE Alu 1 287 -25 494 310 32 13 chr2 37993738 37993896 -215262687 + MER5B DNA MER1_type 18 178 0 1152 214 66 7 chr2 37994117 37994406 -215262177 - MER114 LTR ERV -342 306 1 1928 109 12 75 chr2 37994557 37994878 -215261705 + AluSx SINE Alu 1 301 -11 368 183 14 0 chr2 37995123 37995194 -215261389 - MER94 DNA DNA -62 72 1 759 291 129 31 chr2 37995271 37995851 -215260732 - L2 LINE L2 -2527 787 151 213 303 11 34 chr2 37995906 37995995 -215260588 - MIR3 SINE MIR -14 194 108 191 250 0 0 chr2 37996740 37996772 -215259811 - L2 LINE L2 -98 3174 3143 273 281 0 0 chr2 37996890 37996954 -215259629 - MIR SINE MIR -19 243 180 365 106 0 0 chr2 37996973 37997020 -215259563 - MSTD LTR MaLR 0 457 411 * 1223 206 16 24 chr2 37996995 37997243 -215259340 - MSTD LTR MaLR -150 246 1 371 337 12 0 chr2 37997247 37997398 -215259185 - MIR SINE MIR -82 126 4 328 336 19 10 chr2 37997672 37997776 -215258807 + L2 LINE L2 2974 3078 -194 1936 134 35 14 chr2 37998160 37998450 -215258133 - AluSx SINE Alu -16 296 1 400 320 211 16 chr2 37998492 37998876 -215257707 - L2 LINE L2 -5 3267 2809 235 282 14 0 chr2 37998884 37998955 -215257628 - MLT1L LTR MaLR 0 615 544 472 214 28 62 chr2 38001009 38001154 -215255429 - MIR3 SINE MIR -66 142 3 650 324 17 28 chr2 38001819 38002106 -215254477 + REP3 LTR ERV 3 286 -276 2061 136 3 0 chr2 38002108 38002410 -215254173 - AluSx SINE Alu -5 307 5 484 86 0 0 chr2 38002441 38002511 -215254072 + AluJ/FRAM SINE Alu 233 302 -10 413 258 141 12 chr2 38002533 38002696 -215253887 + REP3 LTR ERV 335 518 -44 1897 145 3 23 chr2 38003197 38003501 -215253082 - AluJb SINE Alu -14 298 1 2197 119 0 3 chr2 38003517 38003827 -215252756 - AluY SINE Alu 0 311 3 320 273 39 78 chr2 38004243 38004327 -215252256 - MIR SINE MIR -32 230 153 3706 151 65 11 chr2 38004327 38004524 -215252059 - L1MA5 LINE L1 -5 6295 6110 2455 58 10 10 chr2 38004524 38004832 -215251751 + AluY SINE Alu 1 308 -3 3706 151 65 11 chr2 38004832 38005268 -215251315 - L1MA5 LINE L1 -190 6110 5628 320 273 39 78 chr2 38005268 38005337 -215251246 - MIR SINE MIR -109 153 83 5356 238 45 8 chr2 38006254 38007788 -215248795 - L1MEc LINE L1 -2229 3986 2397 1345 132 0 0 chr2 38007793 38007982 -215248601 - AluSg/x SINE Alu -8 304 116 2043 137 0 3 chr2 38008019 38008338 -215248245 + AluSg SINE Alu 1 318 0 2012 260 49 26 chr2 38008339 38008378 -215248205 - L1MEc LINE L1 -4325 2071 2034 2121 73 3 108 chr2 38008378 38008719 -215247864 + AluY SINE Alu 1 305 -6 2012 260 49 26 chr2 38008719 38009433 -215247150 - L1MEc LINE L1 -4362 2034 1301 1382 273 92 25 chr2 38009431 38009941 -215246642 - L1MEc LINE L1 -5814 582 39 * 2501 77 0 0 chr2 38010031 38010341 -215246242 - AluSp SINE Alu -3 310 1 2894 62 5 50 chr2 38010703 38011104 -215245479 - L1PB1 LINE L1 0 6151 5769 * 7200 68 37 0 chr2 38011096 38012052 -215244531 - L1PA8 LINE L1 -2 6170 5205 878 166 104 19 chr2 38012135 38012268 -215244315 - MER93b LTR ERV1 0 373 253 2728 102 41 78 chr2 38012268 38012729 -215243854 + MLT2A1 LTR ERVL 1 444 0 878 166 104 19 chr2 38012729 38012911 -215243672 - MER93b LTR ERV1 -120 253 1 336 103 52 0 chr2 38013050 38013108 -215243475 + MLT1L LTR MaLR 216 276 -339 804 231 28 6 chr2 38013115 38013297 -215243286 - MLT1B LTR MaLR 0 390 205 231 61 0 0 chr2 38013299 38013332 -215243251 + (GGGGA)n Simple_repeat Simple_repeat 5 37 0 456 285 100 40 chr2 38014022 38014582 -215242001 + L1MC/D LINE L1 3688 4289 -1857 977 114 8 0 chr2 38014660 38014791 -215241792 - FLAM_C SINE Alu 0 133 2 311 308 159 14 chr2 38015126 38015344 -215241239 + L1MC/D LINE L1 4741 5009 -1137 405 0 0 0 chr2 38015344 38015389 -215241194 + (CA)n Simple_repeat Simple_repeat 2 46 0 311 308 159 14 chr2 38015389 38015446 -215241137 + L1MC/D LINE L1 5009 5056 -1090 1361 165 88 11 chr2 38015588 38015861 -215240722 - AluJo SINE Alu -18 294 1 1379 231 181 31 chr2 38016314 38016799 -215239784 + MLT1E2 LTR MaLR 1 558 -68 496 275 46 61 chr2 38016814 38017160 -215239423 + L1MC/D LINE L1 5362 5702 -540 330 234 228 18 chr2 38017599 38017766 -215238817 + L2 LINE L2 3096 3297 -16 276 289 182 0 chr2 38017921 38018042 -215238541 - MIR SINE MIR -49 213 71 316 263 135 23 chr2 38018984 38019117 -215237466 - L2 LINE L2 -2 3311 3164 507 73 0 0 chr2 38024265 38024333 -215232250 + (CA)n Simple_repeat Simple_repeat 2 69 0 478 87 39 10 chr2 38024768 38024872 -215231711 + (TA)n Simple_repeat Simple_repeat 1 107 0 22 0 0 0 chr2 38028628 38028650 -215227933 + AT_rich Low_complexity Low_complexity 1 22 0 2398 97 0 3 chr2 38029583 38029893 -215226690 + AluSc SINE Alu 1 309 0 1329 212 53 2 chr2 38030723 38031068 -215225515 + L1MC4 LINE L1 7691 7995 0 2301 114 0 0 chr2 38031255 38031563 -215225020 + AluSx SINE Alu 1 308 -4 263 216 0 0 chr2 38032295 38032346 -215224237 - MARNA DNA Mariner -120 466 416 245 239 190 54 chr2 38032368 38032552 -215224031 + MARNA DNA Mariner 210 418 -168 202 237 17 34 chr2 38032901 38032960 -215223623 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 27 29 0 0 chr2 38034133 38034167 -215222416 + AT_rich Low_complexity Low_complexity 1 34 0 2750 204 75 58 chr2 38034405 38035082 -215221501 + L1ME2 LINE L1 5351 6015 -149 2068 159 128 16 chr2 38035082 38035465 -215221118 + MSTA LTR MaLR 3 428 0 838 124 7 58 chr2 38035468 38035605 -215220978 - FLAM_C SINE Alu -1 132 3 2750 204 75 58 chr2 38035605 38035723 -215220860 + L1ME2 LINE L1 6016 6164 0 1174 117 101 17 chr2 38035773 38036078 -215220505 + AluSx SINE Alu 1 320 0 32 43 0 0 chr2 38036572 38036618 -215219965 + AT_rich Low_complexity Low_complexity 1 46 0 187 182 30 0 chr2 38037032 38037065 -215219518 - MIR SINE MIR -75 187 154 214 333 24 73 chr2 38037145 38037268 -215219315 - L2 LINE L2 -22 3250 3134 247 355 57 54 chr2 38038139 38038562 -215218021 - L2 LINE L2 -1294 2020 1597 776 231 35 0 chr2 38039805 38039974 -215216609 + MER58C DNA MER1_type 2 176 -39 297 0 0 0 chr2 38040112 38040145 -215216438 + (CA)n Simple_repeat Simple_repeat 1 33 0 5138 123 44 2 chr2 38040157 38040995 -215215588 - L1PA15 LINE L1 -8 6157 5285 * 14610 195 29 16 chr2 38040993 38041112 -215215471 - L1P4 LINE L1 -734 5431 5315 2317 55 41 3 chr2 38041112 38041403 -215215180 - AluY SINE Alu -9 302 1 14610 195 29 16 chr2 38041403 38043080 -215213503 - L1P4 LINE L1 -850 5315 3661 2279 98 0 19 chr2 38043080 38043395 -215213188 - AluSq SINE Alu -4 309 1 14610 195 29 16 chr2 38043395 38043952 -215212631 - L1P4 LINE L1 -2504 3661 3113 2217 106 0 0 chr2 38043952 38044234 -215212349 - AluSg SINE Alu -22 288 7 14610 195 29 16 chr2 38044234 38044458 -215212125 - L1P4 LINE L1 -3052 3113 2893 1453 190 31 17 chr2 38044458 38044747 -215211836 - AluJb SINE Alu -19 293 1 14610 195 29 16 chr2 38044747 38045566 -215211017 - L1P4 LINE L1 -3272 2893 1990 574 107 11 203 chr2 38045590 38045777 -215210806 + FRAM SINE Alu 18 168 -8 480 196 49 0 chr2 38045778 38045880 -215210703 - U6 snRNA snRNA 0 107 1 375 360 46 29 chr2 38046510 38046749 -215209834 + MIR SINE MIR 20 262 0 22 56 0 0 chr2 38048219 38048255 -215208328 + AT_rich Low_complexity Low_complexity 1 36 0 6121 123 118 13 chr2 38048834 38049948 -215206635 + Tigger3b DNA MER2_type 1 1231 0 789 256 6 0 chr2 38050057 38050237 -215206346 - MIR SINE MIR -50 212 32 409 350 13 6 chr2 38050289 38050446 -215206137 + L3 LINE CR1 1143 1300 -277 1866 210 82 41 chr2 38050456 38050971 -215205612 + MLT1F LTR MaLR 1 536 -6 782 256 0 0 chr2 38051791 38051947 -215204636 + AluY SINE Alu 133 288 -23 2288 105 0 0 chr2 38052043 38052337 -215204246 + AluSc SINE Alu 1 294 -15 2151 105 0 29 chr2 38052354 38052667 -215203916 + AluY SINE Alu 1 304 -7 274 286 0 12 chr2 38052670 38052754 -215203829 + L1MEd LINE L1 1032 1114 -5091 375 205 16 33 chr2 38052820 38052942 -215203641 + L1MEd LINE L1 1101 1220 -4997 230 274 81 81 chr2 38053025 38053284 -215203299 + L1MEd LINE L1 1496 1754 -4642 1935 162 13 0 chr2 38053608 38053910 -215202673 + AluJo SINE Alu 1 306 -6 360 303 0 32 chr2 38053910 38054040 -215202543 + L1MEd LINE L1 2228 2394 -3875 2367 71 3 3 chr2 38054040 38054336 -215202247 - AluY SINE Alu -15 296 1 1710 179 0 13 chr2 38054365 38054666 -215201917 + AluJb SINE Alu 1 297 -15 261 269 131 69 chr2 38054699 38054844 -215201739 - L2 LINE L2 -661 2653 2500 2377 74 0 3 chr2 38055132 38055428 -215201155 - AluY SINE Alu -16 295 1 2046 122 7 3 chr2 38055911 38056215 -215200368 - AluSx SINE Alu -7 305 1 629 225 31 84 chr2 38056875 38057102 -215199481 + L1ME3A LINE L1 5941 6155 -15 2365 107 0 0 chr2 38057121 38057431 -215199152 - AluSx SINE Alu 0 312 3 2174 124 3 0 chr2 38057442 38057749 -215198834 - AluSx SINE Alu -3 309 2 21 36 0 0 chr2 38057924 38057952 -215198631 + AT_rich Low_complexity Low_complexity 1 28 0 1427 182 0 85 chr2 38058228 38058364 -215198219 + AluJo SINE Alu 1 96 -216 2063 123 0 3 chr2 38058364 38058648 -215197935 - AluSx SINE Alu -29 283 1 1427 182 0 85 chr2 38058648 38058829 -215197754 + AluJo SINE Alu 96 291 -21 180 0 0 0 chr2 38059449 38059469 -215197114 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2284 117 0 16 chr2 38059496 38059813 -215196770 - AluSx SINE Alu 0 312 1 21 0 0 0 chr2 38059823 38059844 -215196739 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 38060677 38060721 -215195862 + AT_rich Low_complexity Low_complexity 1 44 0 704 136 7 100 chr2 38060766 38060865 -215195718 - FAM SINE Alu -158 163 79 1878 178 0 6 chr2 38060865 38061179 -215195404 + AluJb SINE Alu 1 312 0 704 136 7 100 chr2 38061179 38061219 -215195364 - FAM SINE Alu -242 79 37 2155 127 0 7 chr2 38061553 38061853 -215194730 + AluSx SINE Alu 1 298 -14 21 0 0 0 chr2 38063201 38063222 -215193361 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr2 38065423 38065467 -215191116 + (CA)n Simple_repeat Simple_repeat 2 45 0 2017 127 23 0 chr2 38065527 38065647 -215190936 + AluSq SINE Alu 1 117 -196 441 0 0 0 chr2 38065647 38065696 -215190887 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 2017 127 23 0 chr2 38065696 38065874 -215190709 + AluSq SINE Alu 117 306 -7 1755 222 167 93 chr2 38066249 38067020 -215189563 + L2 LINE L2 2207 2919 -394 288 0 0 0 chr2 38067020 38067052 -215189531 + (TG)n Simple_repeat Simple_repeat 1 32 0 1755 222 167 93 chr2 38067052 38067070 -215189513 + L2 LINE L2 2919 2934 -379 1805 170 0 10 chr2 38067070 38067364 -215189219 - AluJo SINE Alu -21 291 1 1755 222 167 93 chr2 38067364 38067584 -215188999 + L2 LINE L2 2934 3311 -2 2439 85 0 0 chr2 38068858 38069164 -215187419 - AluSx SINE Alu -6 306 1 1339 149 27 5 chr2 38069331 38069552 -215187031 - MER46A DNA MER2_type 0 236 11 2014 123 14 0 chr2 38069628 38069913 -215186670 + AluSx SINE Alu 4 292 -20 1507 161 27 23 chr2 38070516 38070815 -215185768 + L1PA16 LINE L1 5867 6166 0 2002 129 3 0 chr2 38071119 38071405 -215185178 + AluSx SINE Alu 1 287 -25 365 109 0 0 chr2 38071405 38071460 -215185123 + Alu SINE Alu 238 292 -8 551 265 54 12 chr2 38073206 38073372 -215183211 - MER117 DNA MER1_type 0 197 25 2480 58 0 0 chr2 38073426 38073720 -215182863 + AluY SINE Alu 1 294 -17 238 291 136 78 chr2 38073787 38073993 -215182590 - L3 LINE CR1 -1127 450 233 2179 90 0 42 chr2 38074010 38074322 -215182261 + AluY SINE Alu 1 299 -12 2322 107 3 0 chr2 38075266 38075575 -215181008 + AluSp SINE Alu 1 310 -3 2348 72 7 7 chr2 38075826 38076117 -215180466 - AluY SINE Alu -20 291 1 1124 179 102 38 chr2 38076135 38076370 -215180213 - AluJo SINE Alu -61 251 2 33 25 0 0 chr2 38076482 38076522 -215180061 + AT_rich Low_complexity Low_complexity 1 40 0 323 269 129 59 chr2 38076951 38077137 -215179446 - MIR SINE MIR -56 206 8 267 241 9 27 chr2 38077251 38077363 -215179220 + GA-rich Low_complexity Low_complexity 2 111 0 261 139 0 0 chr2 38078241 38078284 -215178299 + (CCTA)n Simple_repeat Simple_repeat 2 44 0 1642 154 4 32 chr2 38078285 38078564 -215178019 - AluSx SINE Alu -30 282 12 22 0 0 0 chr2 38078658 38078680 -215177903 + AT_rich Low_complexity Low_complexity 1 22 0 2167 92 0 18 chr2 38078989 38079302 -215177281 + AluSc SINE Alu 1 308 0 2269 100 0 0 chr2 38079651 38079950 -215176633 + AluY SINE Alu 1 299 -12 22 56 0 0 chr2 38081180 38081216 -215175367 + AT_rich Low_complexity Low_complexity 1 36 0 253 299 142 22 chr2 38081713 38081847 -215174736 + MIR SINE MIR 20 169 -93 180 282 0 0 chr2 38081821 38081860 -215174723 + L2 LINE L2 3253 3291 -22 * 833 229 86 4 chr2 38082029 38082273 -215174310 - Charlie7 DNA MER1_type -353 2259 1996 570 279 88 7 chr2 38082279 38082551 -215174032 - Charlie7 DNA MER1_type -721 1891 1598 1817 149 3 7 chr2 38082927 38083209 -215173374 + AluSx SINE Alu 3 283 -29 309 26 0 0 chr2 38083209 38083247 -215173336 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 2342 97 3 0 chr2 38083350 38083649 -215172934 - AluSq SINE Alu -13 300 1 1324 74 42 23 chr2 38084331 38084546 -215172037 + L1MA2 LINE L1 6086 6304 0 1794 147 21 4 chr2 38084564 38084843 -215171740 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 38084844 38084873 -215171710 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 38084878 38084902 -215171681 + AT_rich Low_complexity Low_complexity 1 24 0 2114 102 23 16 chr2 38085024 38085329 -215171254 + AluSx SINE Alu 1 307 -5 2096 118 3 3 chr2 38085651 38085947 -215170636 + AluSg SINE Alu 4 299 -11 291 241 176 9 chr2 38085947 38086055 -215170528 - MIR SINE MIR -18 244 119 215 245 0 0 chr2 38086353 38086406 -215170177 + A-rich Low_complexity Low_complexity 1 53 0 878 193 28 47 chr2 38086691 38086945 -215169638 + L1ME1 LINE L1 5767 6015 -151 248 98 0 0 chr2 38086938 38086979 -215169604 + L1MB7 LINE L1 6127 6167 -17 * 1921 134 0 28 chr2 38087071 38087361 -215169222 + AluSx SINE Alu 1 282 -30 1186 125 0 11 chr2 38087382 38087558 -215169025 + AluSg/x SINE Alu 129 302 -10 753 240 27 14 chr2 38087763 38087984 -215168599 + L1MEc LINE L1 203 426 -6137 622 285 4 23 chr2 38087976 38088239 -215168344 + L1MEc LINE L1 1290 1547 -4837 * 1790 212 100 42 chr2 38088220 38088271 -215168312 + L1MEc LINE L1 1781 1828 -4735 2400 89 0 0 chr2 38088271 38088573 -215168010 + AluSq SINE Alu 1 302 -11 1790 212 100 42 chr2 38088573 38089181 -215167402 + L1MEc LINE L1 1828 2478 -4085 288 246 0 0 chr2 38089796 38089853 -215166730 + MER58B DNA MER1_type 1 57 -284 * 718 199 68 0 chr2 38089846 38089992 -215166591 + MER58B DNA MER1_type 182 337 -4 1079 299 180 67 chr2 38090039 38091311 -215165272 + L2 LINE L2 983 2580 -692 395 123 0 0 chr2 38091311 38091368 -215165215 + U6 snRNA snRNA 1 57 -50 1079 299 180 67 chr2 38091368 38091904 -215164679 + L2 LINE L2 2580 3054 -218 1722 168 10 27 chr2 38092370 38092668 -215163915 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 38092829 38092858 -215163725 + AT_rich Low_complexity Low_complexity 1 29 0 484 281 15 40 chr2 38093083 38093243 -215163340 + MIR3 SINE MIR 2 160 -66 2426 60 0 3 chr2 38093295 38093595 -215162988 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 38093605 38093654 -215162929 + (TA)n Simple_repeat Simple_repeat 2 50 0 183 114 0 0 chr2 38095425 38095460 -215161123 + (A)n Simple_repeat Simple_repeat 1 35 0 2063 137 10 16 chr2 38095620 38095934 -215160649 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 38096828 38096854 -215159729 + AT_rich Low_complexity Low_complexity 1 26 0 230 268 18 0 chr2 38097509 38097565 -215159018 - L2 LINE L2 -9 3263 3207 251 289 14 113 chr2 38097707 38097849 -215158734 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 38098268 38098289 -215158294 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 38098598 38098629 -215157954 + AT_rich Low_complexity Low_complexity 1 31 0 2353 101 3 0 chr2 38098737 38099045 -215157538 + AluSp SINE Alu 1 309 -4 262 298 165 54 chr2 38099088 38099176 -215157407 + L2 LINE L2 1698 1775 -1539 2168 113 0 0 chr2 38099176 38099467 -215157116 + AluSc SINE Alu 2 292 -17 262 298 165 54 chr2 38099467 38099874 -215156709 + L2 LINE L2 1775 2248 -1066 237 333 156 52 chr2 38099961 38100249 -215156334 + L2 LINE L2 2432 2749 -565 762 232 170 35 chr2 38100251 38100592 -215155991 + L1MC4 LINE L1 7632 8018 -24 1617 220 0 0 chr2 38100617 38100922 -215155661 + AluJo SINE Alu 1 305 -7 2214 97 17 0 chr2 38101247 38101536 -215155047 + AluSc SINE Alu 1 294 -15 2097 121 20 7 chr2 38101548 38101845 -215154738 + AluSx SINE Alu 1 301 -11 2493 70 0 0 chr2 38102455 38102754 -215153829 + AluY SINE Alu 1 299 -12 2255 105 3 0 chr2 38103155 38103459 -215153124 + AluSp SINE Alu 1 305 -8 2245 99 14 0 chr2 38103876 38104169 -215152414 + AluSx SINE Alu 2 298 -14 1806 167 0 7 chr2 38105605 38105905 -215150678 + AluJo SINE Alu 1 298 -14 653 164 31 23 chr2 38105927 38106055 -215150528 + FLAM_C SINE Alu 1 129 -4 323 297 93 9 chr2 38106155 38106370 -215150213 + L1MC/D LINE L1 5538 5773 -490 231 313 0 0 chr2 38106681 38106748 -215149835 + A-rich Low_complexity Low_complexity 1 67 0 2169 119 0 0 chr2 38106750 38107043 -215149540 + AluSx SINE Alu 1 293 -19 2389 66 0 20 chr2 38107043 38107346 -215149237 + AluSg1 SINE Alu 1 297 -12 2263 102 0 3 chr2 38107768 38108063 -215148520 - AluSg SINE Alu -16 294 1 2366 104 0 0 chr2 38108530 38108827 -215147756 + AluSx SINE Alu 1 297 -15 994 169 47 0 chr2 38108849 38109021 -215147562 - MER5A DNA MER1_type -9 180 1 195 42 0 0 chr2 38109061 38109085 -215147498 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2056 128 16 10 chr2 38109131 38109435 -215147148 + AluSx SINE Alu 1 306 -6 292 163 0 0 chr2 38109472 38109515 -215147068 - Alu SINE Alu -257 43 1 377 269 161 8 chr2 38109907 38110037 -215146546 - L2 LINE L2 0 3272 3123 1728 154 33 0 chr2 38110201 38110500 -215146083 - AluJo SINE Alu 0 308 1 2273 95 7 0 chr2 38110540 38110835 -215145748 - AluSx SINE Alu -15 297 1 587 165 9 18 chr2 38110986 38111095 -215145488 - FRAM SINE Alu -16 160 53 243 0 0 0 chr2 38111440 38111467 -215145116 + (CA)n Simple_repeat Simple_repeat 2 28 0 1013 156 33 47 chr2 38111566 38111778 -215144805 - MER2 DNA MER2_type -136 209 1 814 162 128 7 chr2 38112015 38112163 -215144420 - AluJb SINE Alu -23 289 124 2093 103 10 10 chr2 38112208 38112509 -215144074 + AluY SINE Alu 1 301 -10 1738 164 0 4 chr2 38113175 38113444 -215143139 + AluSx SINE Alu 1 268 -44 26 0 0 0 chr2 38113478 38113504 -215143079 + AT_rich Low_complexity Low_complexity 1 26 0 201 290 87 0 chr2 38113953 38114022 -215142561 - L2 LINE L2 0 3313 3239 33 0 0 0 chr2 38114371 38114404 -215142179 + AT_rich Low_complexity Low_complexity 1 33 0 223 172 17 52 chr2 38115428 38115442 -215141141 + GA-rich Low_complexity Low_complexity 2 15 -42 2319 97 10 3 chr2 38115442 38115753 -215140830 + AluSp SINE Alu 1 313 0 223 172 17 52 chr2 38115753 38115767 -215140816 + GA-rich Low_complexity Low_complexity 15 28 -29 1654 210 0 16 chr2 38115767 38116081 -215140502 + AluJb SINE Alu 1 309 -3 223 172 17 52 chr2 38116081 38116109 -215140474 + GA-rich Low_complexity Low_complexity 28 57 0 2033 153 0 7 chr2 38116524 38116824 -215139759 + AluSx SINE Alu 1 298 -14 198 244 24 0 chr2 38116893 38116934 -215139649 + MIR SINE MIR 47 88 -174 1009 104 0 0 chr2 38117351 38117516 -215139067 - AluSc SINE Alu 0 313 149 627 50 0 0 chr2 38117531 38117611 -215138972 - AluY SINE Alu -231 80 1 239 139 0 0 chr2 38117872 38117915 -215138668 + L1M4 LINE L1 3903 3945 -2201 180 0 0 0 chr2 38117920 38117940 -215138643 + (TTA)n Simple_repeat Simple_repeat 2 21 0 822 163 0 0 chr2 38117940 38118063 -215138520 - FLAM_C SINE Alu -20 123 1 195 369 108 9 chr2 38118333 38118444 -215138139 - L2 LINE L2 0 3272 3151 267 228 139 0 chr2 38118823 38118902 -215137681 + L1MC4 LINE L1 7942 8031 -11 2243 98 0 31 chr2 38118926 38119243 -215137340 + AluY SINE Alu 1 307 -4 1669 177 0 14 chr2 38119251 38119545 -215137038 + AluJb SINE Alu 1 290 -22 2146 110 3 13 chr2 38119934 38120233 -215136350 - AluSq SINE Alu -17 296 1 247 252 147 80 chr2 38120444 38120805 -215135778 + MLT1L LTR MaLR 220 604 -11 253 281 52 47 chr2 38120813 38121005 -215135578 - L1ME LINE L1 -356 5765 5573 2245 114 0 0 chr2 38121079 38121376 -215135207 - AluSx SINE Alu -15 297 1 25 31 0 0 chr2 38121376 38121408 -215135175 + AT_rich Low_complexity Low_complexity 1 32 0 183 42 0 0 chr2 38121767 38121791 -215134792 + (TA)n Simple_repeat Simple_repeat 1 24 0 227 221 104 0 chr2 38121795 38121872 -215134711 - MIR SINE MIR -2 260 176 2122 114 0 0 chr2 38121903 38122192 -215134391 + AluY SINE Alu 1 289 -22 2283 108 0 10 chr2 38122215 38122520 -215134063 + AluSq SINE Alu 1 302 -11 433 309 65 12 chr2 38123137 38123446 -215133137 + L1ME LINE L1 5340 5662 -500 2069 113 14 3 chr2 38123766 38124058 -215132525 + AluSg SINE Alu 1 295 -15 345 255 323 5 chr2 38124061 38124253 -215132330 + L1M4 LINE L1 3723 3975 -2171 2143 111 0 10 chr2 38125279 38125576 -215131007 - AluSc SINE Alu -15 294 1 235 49 49 0 chr2 38125927 38125968 -215130615 + (TA)n Simple_repeat Simple_repeat 1 43 0 333 298 105 24 chr2 38126037 38126161 -215130422 + MIR SINE MIR 18 151 -57 27 0 0 0 chr2 38126351 38126378 -215130205 + AT_rich Low_complexity Low_complexity 1 27 0 2433 84 7 0 chr2 38126470 38126780 -215129803 - AluSx SINE Alu 0 312 1 506 204 19 10 chr2 38126974 38127077 -215129506 + L2 LINE L2 3209 3312 -1 1840 168 6 50 chr2 38127353 38127717 -215128866 + MER7A DNA MER2_type 1 346 0 2368 83 0 0 chr2 38128589 38128878 -215127705 - AluSx SINE Alu -5 307 19 266 338 12 0 chr2 38128968 38129048 -215127535 + L2 LINE L2 3147 3227 -45 23 0 0 0 chr2 38129302 38129325 -215127258 + AT_rich Low_complexity Low_complexity 1 23 0 286 313 209 0 chr2 38130033 38130148 -215126435 - L2 LINE L2 0 3272 3134 1440 173 4 0 chr2 38130169 38130423 -215126160 + MER1B DNA MER1_type 4 258 -81 183 80 0 0 chr2 38130425 38130450 -215126133 + (CA)n Simple_repeat Simple_repeat 2 26 0 190 301 161 21 chr2 38130708 38130801 -215125782 - L2 LINE L2 -209 3063 2958 551 265 43 6 chr2 38130906 38131068 -215125515 + MIR SINE MIR 95 262 0 2450 80 0 0 chr2 38131783 38132082 -215124501 - AluY SINE Alu -12 299 1 853 197 0 28 chr2 38132232 38132410 -215124173 + FAM SINE Alu 3 175 0 2097 162 0 3 chr2 38132609 38132918 -215123665 + AluSx SINE Alu 1 308 -4 2099 122 0 23 chr2 38133016 38133319 -215123264 - AluSq SINE Alu -17 296 1 328 341 77 35 chr2 38133563 38133733 -215122850 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 38133909 38133994 -215122589 + CT-rich Low_complexity Low_complexity 5 85 0 1887 148 51 26 chr2 38134137 38134489 -215122094 - MER46B DNA MER2_type 0 236 1 239 263 126 0 chr2 38134665 38134760 -215121823 - MIR SINE MIR -56 206 100 2013 129 13 10 chr2 38135685 38135987 -215120596 + AluSx SINE Alu 3 305 -7 1302 87 29 0 chr2 38136125 38136298 -215120285 - AluSq SINE Alu -2 311 134 2368 94 7 0 chr2 38136298 38136597 -215119986 - AluSx SINE Alu -8 304 4 456 258 93 90 chr2 38136847 38137219 -215119364 + L1MEc LINE L1 1005 1277 -4928 2214 92 14 0 chr2 38137219 38137513 -215119070 + AluY SINE Alu 1 298 -13 456 258 93 90 chr2 38137513 38137581 -215119002 + L1MEc LINE L1 1277 1343 -4862 378 197 28 0 chr2 38137742 38137813 -215118770 + U6 snRNA snRNA 1 73 -34 652 188 109 30 chr2 38138173 38138338 -215118245 - MER5B DNA MER1_type 0 178 1 385 188 150 53 chr2 38138905 38139038 -215117545 - MIR SINE MIR -12 250 105 1235 166 0 5 chr2 38139262 38139493 -215117090 - AluJb SINE Alu 0 315 86 1808 103 64 67 chr2 38139496 38139808 -215116775 - AluJb SINE Alu -1 311 1 1356 248 152 42 chr2 38139810 38140575 -215116008 + L2 LINE L2 2443 3308 -5 2081 93 65 4 chr2 38140909 38141188 -215115395 - AluSc SINE Alu -13 296 1 1888 117 3 96 chr2 38142056 38142390 -215114193 + AluSx SINE Alu 1 303 -9 734 233 146 31 chr2 38143018 38143306 -215113277 + L2 LINE L2 2988 3308 -5 358 326 8 0 chr2 38143306 38143435 -215113148 - MIR3 SINE MIR -71 137 8 214 125 21 21 chr2 38144716 38144764 -215111819 + (CCG)n Simple_repeat Simple_repeat 2 49 0 24 53 0 0 chr2 38145059 38145097 -215111486 + GC_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr2 38145129 38145157 -215111426 + GC_rich Low_complexity Low_complexity 1 28 0 270 0 0 0 chr2 38145279 38145309 -215111274 + (CA)n Simple_repeat Simple_repeat 2 31 0 203 329 73 0 chr2 38146562 38146644 -215109939 - MIR3 SINE MIR -26 182 95 573 103 0 0 chr2 38146833 38146911 -215109672 + AluJ/FLAM SINE Alu 2 79 -233 2646 97 10 79 chr2 38146919 38147322 -215109261 + MER51B LTR ERV1 2 376 -1 1540 127 5 0 chr2 38147322 38147542 -215109041 + AluSg/x SINE Alu 76 296 -16 1117 128 6 23 chr2 38147634 38147806 -215108777 + AluSx SINE Alu 3 171 -141 275 294 59 15 chr2 38147806 38147942 -215108641 + MIR SINE MIR 121 262 0 193 279 73 0 chr2 38147956 38148024 -215108559 + MIR SINE MIR 180 252 -10 2266 97 0 3 chr2 38148096 38148394 -215108189 + AluSg SINE Alu 1 297 -13 2138 113 0 13 chr2 38148396 38148705 -215107878 + AluSq SINE Alu 1 305 -8 2468 66 0 10 chr2 38148950 38149251 -215107332 - AluSc SINE Alu -11 298 1 2075 96 10 7 chr2 38149251 38149543 -215107040 - AluSc SINE Alu -15 294 1 1861 129 7 4 chr2 38149644 38149924 -215106659 + AluSx SINE Alu 2 282 -30 258 105 0 0 chr2 38149924 38149962 -215106621 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 275 159 95 0 chr2 38150006 38150069 -215106514 - L1MB8 LINE L1 -245 5933 5865 1907 159 0 7 chr2 38150069 38150377 -215106206 - AluSx SINE Alu -6 306 1 28 61 0 0 chr2 38150951 38151000 -215105583 + AT_rich Low_complexity Low_complexity 1 49 0 2173 112 14 0 chr2 38152343 38152637 -215103946 - AluSx SINE Alu -14 298 1 2395 48 0 27 chr2 38152683 38152975 -215103608 - AluY SINE Alu -27 284 1 229 65 0 0 chr2 38152997 38153043 -215103540 - LTR66 LTR ERVL -171 439 394 309 185 0 0 chr2 38153055 38153120 -215103463 + (TA)n Simple_repeat Simple_repeat 2 66 0 322 258 22 22 chr2 38153121 38153210 -215103373 - L1MC4 LINE L1 -1340 6702 6614 322 311 0 0 chr2 38153134 38153224 -215103359 + L1MC4 LINE L1 6614 6703 -1339 1498 128 145 0 chr2 38153366 38153633 -215102950 + AluSx SINE Alu 9 310 0 884 185 11 28 chr2 38153684 38153862 -215102721 + AluJb SINE Alu 16 190 -122 868 222 6 0 chr2 38153862 38154024 -215102559 + AluJo/FRAM SINE Alu 137 299 -3 183 226 0 0 chr2 38154390 38154421 -215102162 + L2 LINE L2 3210 3240 -32 640 214 0 0 chr2 38154491 38154635 -215101948 - AluJo SINE Alu 0 316 173 660 179 0 0 chr2 38154636 38154742 -215101841 - AluJo SINE Alu -205 107 2 290 349 48 0 chr2 38154945 38155028 -215101555 - MIR SINE MIR -57 151 65 2387 69 0 13 chr2 38155095 38155399 -215101184 + AluY SINE Alu 3 302 -9 2273 93 7 0 chr2 38155412 38155702 -215100881 + AluSx SINE Alu 7 298 -14 829 211 7 7 chr2 38155707 38155859 -215100724 + FRAM SINE Alu 1 152 -14 2499 83 3 0 chr2 38156162 38156474 -215100109 + AluSp SINE Alu 1 313 0 202 182 0 0 chr2 38156522 38156555 -215100028 + polypurine Low_complexity Low_complexity 3 35 0 2420 144 54 61 chr2 38156720 38157064 -215099519 + L1MB8 LINE L1 5573 5918 -260 1936 116 67 0 chr2 38157064 38157348 -215099235 + AluSx SINE Alu 1 303 -9 2420 144 54 61 chr2 38157348 38157362 -215099221 + L1MB8 LINE L1 5918 5931 -247 1960 143 0 3 chr2 38157362 38157656 -215098927 + AluJb SINE Alu 11 303 -9 2420 144 54 61 chr2 38157656 38157891 -215098692 + L1MB8 LINE L1 5931 6124 -54 1364 162 81 13 chr2 38157891 38158126 -215098457 - AluJo SINE Alu -57 255 5 821 183 14 14 chr2 38158247 38158389 -215098194 + AluJb SINE Alu 137 278 -34 225 0 0 0 chr2 38158392 38158417 -215098166 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 2235 97 16 7 chr2 38158426 38158735 -215097848 + AluSx SINE Alu 1 312 0 489 165 110 0 chr2 38158805 38158896 -215097687 + FRAM SINE Alu 73 173 -3 362 287 0 70 chr2 38159023 38159166 -215097417 + L2 LINE L2 3176 3308 -5 453 50 0 0 chr2 38161232 38161292 -215095291 + (CA)n Simple_repeat Simple_repeat 2 61 0 532 208 28 56 chr2 38161309 38161453 -215095130 + L2 LINE L2 3173 3312 -1 2181 72 7 41 chr2 38161632 38161946 -215094637 + AluSp SINE Alu 6 309 0 1205 108 0 12 chr2 38161951 38162118 -215094465 + AluSg/x SINE Alu 126 290 -20 25 0 0 0 chr2 38162166 38162191 -215094392 + AT_rich Low_complexity Low_complexity 1 25 0 2466 74 0 3 chr2 38162297 38162596 -215093987 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 38162596 38162619 -215093964 + (TA)n Simple_repeat Simple_repeat 2 24 0 2156 114 0 29 chr2 38163829 38164145 -215092438 - AluSg SINE Alu -3 307 1 181 309 107 0 chr2 38164484 38164568 -215092015 - L2 LINE L2 -54 3259 3167 2214 114 3 0 chr2 38165000 38165297 -215091286 - AluSx SINE Alu -14 298 1 1005 128 0 0 chr2 38165300 38165433 -215091150 - AluSq/x SINE Alu -180 133 1 263 250 119 0 chr2 38165434 38165518 -215091065 + L1ME LINE L1 5589 5682 -439 1971 142 28 0 chr2 38165527 38165816 -215090767 + AluSx SINE Alu 1 297 -15 1842 158 7 10 chr2 38166171 38166468 -215090115 + AluJb SINE Alu 5 300 -12 2124 122 3 7 chr2 38166638 38166941 -215089642 - AluSc SINE Alu -6 303 2 2377 94 0 0 chr2 38167467 38167764 -215088819 - AluSc SINE Alu -12 297 1 185 91 0 30 chr2 38168066 38168099 -215088484 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 201 304 22 33 chr2 38168182 38168274 -215088309 - MER5A DNA MER1_type -28 161 71 2099 97 47 17 chr2 38168275 38168575 -215088008 - AluSg SINE Alu -1 309 1 886 128 0 28 chr2 38169229 38169370 -215087213 - FLAM_C SINE Alu -6 137 1 22 56 0 0 chr2 38169506 38169542 -215087041 + AT_rich Low_complexity Low_complexity 1 36 0 1804 107 118 11 chr2 38169625 38169895 -215086688 + AluSg SINE Alu 1 299 -11 1595 132 119 4 chr2 38170328 38170606 -215085977 + AluSg1 SINE Alu 1 307 0 1867 172 0 0 chr2 38170689 38170985 -215085598 + AluJb SINE Alu 11 306 -6 39 38 0 0 chr2 38171076 38171129 -215085454 + AT_rich Low_complexity Low_complexity 1 53 0 1411 192 4 4 chr2 38171150 38171405 -215085178 - AluJo SINE Alu -57 255 1 560 219 71 20 chr2 38171445 38171613 -215084970 + L1MC4a LINE L1 6701 6908 -877 2006 133 0 35 chr2 38171630 38171946 -215084637 + AluSx SINE Alu 1 305 -7 2147 208 146 55 chr2 38171972 38172680 -215083903 + L1MC4 LINE L1 7270 8041 -1 25 0 0 0 chr2 38173101 38173126 -215083457 + AT_rich Low_complexity Low_complexity 1 25 0 2384 83 3 0 chr2 38173130 38173430 -215083153 - AluY SINE Alu -10 301 1 2063 125 20 3 chr2 38173468 38173763 -215082820 - AluSg SINE Alu -10 300 1 1018 160 0 0 chr2 38174277 38174433 -215082150 - AluJb SINE Alu -23 289 134 2201 101 7 3 chr2 38174442 38174739 -215081844 - AluSg SINE Alu -12 298 1 1672 137 54 73 chr2 38174797 38174982 -215081601 - AluSq SINE Alu -4 309 131 2297 86 3 3 chr2 38174982 38175272 -215081311 - AluSp SINE Alu -23 290 1 1672 137 54 73 chr2 38175272 38175401 -215081182 - AluSq SINE Alu -182 131 1 1752 180 0 13 chr2 38175559 38175865 -215080718 - AluJo SINE Alu -6 306 5 2406 71 0 0 chr2 38175945 38176241 -215080342 - AluY SINE Alu -10 301 6 648 303 107 18 chr2 38176609 38177070 -215079513 + L1MC/D LINE L1 5300 5803 -735 25 0 0 0 chr2 38177217 38177242 -215079341 + AT_rich Low_complexity Low_complexity 1 25 0 2321 85 0 20 chr2 38177313 38177619 -215078964 + AluSg SINE Alu 1 300 -10 1999 142 0 3 chr2 38177776 38178071 -215078512 + AluSx SINE Alu 1 294 -18 2140 134 0 3 chr2 38178111 38178418 -215078165 + AluSg SINE Alu 1 306 -4 2063 108 7 30 chr2 38178459 38178756 -215077827 - AluSx SINE Alu -22 290 1 399 328 124 21 chr2 38179661 38179902 -215076681 - L3 LINE CR1 -5 1572 1307 825 112 0 9 chr2 38179903 38180019 -215076564 + MER30B DNA MER1_type 1 115 -75 2173 110 13 10 chr2 38180038 38180347 -215076236 - AluSx SINE Alu -2 310 1 345 162 73 0 chr2 38181216 38181284 -215075299 - MER116 DNA Mariner 0 80 8 1759 154 19 26 chr2 38181357 38181669 -215074914 + AluSx SINE Alu 1 310 -2 901 206 12 0 chr2 38181669 38181834 -215074749 + AluJo/FRAM SINE Alu 134 300 -12 607 331 74 39 chr2 38183251 38183726 -215072857 + L2 LINE L2 2595 3085 -228 2265 101 19 0 chr2 38184745 38185052 -215071531 + AluSp SINE Alu 1 313 0 2128 104 34 3 chr2 38185718 38186015 -215070568 - AluSx SINE Alu -6 306 1 2431 94 0 0 chr2 38187358 38187667 -215068916 + AluSc SINE Alu 1 309 0 1945 129 24 14 chr2 38187682 38187976 -215068607 + AluJo SINE Alu 4 300 -12 1820 126 0 4 chr2 38188900 38189161 -215067422 - AluSx SINE Alu -19 293 34 184 336 39 94 chr2 38189218 38189346 -215067237 - L2 LINE L2 -3 3269 3149 229 275 87 0 chr2 38189458 38189527 -215067056 + L2 LINE L2 3198 3272 0 24 0 0 0 chr2 38189836 38189860 -215066723 + AT_rich Low_complexity Low_complexity 1 24 0 609 270 14 19 chr2 38190175 38190386 -215066197 - L1ME LINE L1 -391 5730 5521 237 286 51 10 chr2 38190650 38190748 -215065835 - L1ME LINE L1 -373 5748 5647 2296 85 3 3 chr2 38190775 38191070 -215065513 - AluSq SINE Alu -18 295 1 192 355 95 71 chr2 38191153 38191449 -215065134 + L2 LINE L2 2966 3268 -4 340 279 25 0 chr2 38191523 38191602 -215064981 + Tigger7 DNA MER2_type 1 81 -258 712 203 0 0 chr2 38191784 38191917 -215064666 + FLAM_A SINE Alu 1 133 0 2192 98 0 3 chr2 38192556 38192842 -215063741 - AluY SINE Alu -26 285 1 2142 94 27 20 chr2 38193077 38193376 -215063207 + AluSc SINE Alu 1 301 -8 426 354 70 74 chr2 38193529 38194449 -215062134 - L2 LINE L2 -419 2895 1980 2312 96 3 0 chr2 38194490 38194791 -215061792 - AluY SINE Alu -9 302 1 692 250 64 67 chr2 38194792 38195120 -215061463 - MER46C DNA MER2_type 0 338 12 21 0 0 0 chr2 38195200 38195221 -215061362 + AT_rich Low_complexity Low_complexity 1 21 0 1689 109 4 35 chr2 38195526 38195783 -215060800 + AluSx SINE Alu 44 292 -20 2318 94 0 7 chr2 38195786 38196094 -215060489 + AluSq SINE Alu 4 309 -4 2039 121 7 7 chr2 38197260 38197558 -215059025 + AluSg SINE Alu 1 298 -12 1677 179 0 0 chr2 38197826 38198100 -215058483 - AluJb SINE Alu -1 311 38 2180 124 0 3 chr2 38198278 38198585 -215057998 - AluSx SINE Alu -6 306 1 288 189 0 0 chr2 38199507 38199560 -215057023 - MER58 DNA MER1_type -1 2419 2367 400 126 136 29 chr2 38199562 38199665 -215056918 + MER4C LTR ERV1 3 116 -349 944 217 79 90 chr2 38199746 38199987 -215056596 + LTR34 LTR ERV1 136 378 -321 2058 127 7 0 chr2 38199987 38200286 -215056297 + AluJb SINE Alu 1 301 -11 944 217 79 90 chr2 38200286 38200530 -215056053 + LTR34 LTR ERV1 378 695 -4 2206 103 0 7 chr2 38200564 38200855 -215055728 - AluSg SINE Alu -19 291 3 886 230 12 0 chr2 38200858 38201023 -215055560 - MER58A DNA MER1_type 0 168 2 1589 233 34 26 chr2 38201113 38201641 -215054942 + L1MEc LINE L1 628 1159 -5237 1891 148 3 28 chr2 38201867 38202185 -215054398 + AluSx SINE Alu 1 310 -2 3088 156 52 0 chr2 38202310 38202908 -215053675 + L1MA8 LINE L1 5660 6288 -3 186 43 0 0 chr2 38204233 38204256 -215052327 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2246 175 42 28 chr2 38204303 38204800 -215051783 + MLT1D LTR MaLR 1 504 -1 391 354 66 55 chr2 38204812 38205086 -215051497 + L2 LINE L2 2990 3266 -6 2085 103 3 20 chr2 38205192 38205484 -215051099 - AluSx SINE Alu -25 287 1 196 247 78 91 chr2 38205667 38205744 -215050839 + MIR3 SINE MIR 101 176 -32 36 23 0 0 chr2 38206608 38206651 -215049932 + AT_rich Low_complexity Low_complexity 1 43 0 217 188 21 0 chr2 38206963 38207011 -215049572 + (TA)n Simple_repeat Simple_repeat 1 49 0 2223 93 0 0 chr2 38207762 38208040 -215048543 + AluSq SINE Alu 1 278 -35 1901 127 18 0 chr2 38208041 38208356 -215048227 + AluSg SINE Alu 3 322 0 251 260 0 0 chr2 38208719 38208796 -215047787 - L1ME LINE L1 -237 5884 5808 527 317 42 15 chr2 38208878 38209140 -215047443 - L1ME LINE L1 -469 5652 5384 2173 206 124 0 chr2 38209183 38209682 -215046901 + MER68 LTR ERV1 2 562 0 30 83 0 0 chr2 38209706 38209778 -215046805 + AT_rich Low_complexity Low_complexity 1 72 0 643 122 37 19 chr2 38209806 38209913 -215046670 - FLAM_A SINE Alu 0 142 34 195 100 0 0 chr2 38210631 38210661 -215045922 + (CTTA)n Simple_repeat Simple_repeat 2 31 0 814 231 0 0 chr2 38210664 38210811 -215045772 - FRAM SINE Alu -30 146 1 189 107 0 0 chr2 38211226 38211254 -215045329 + (TA)n Simple_repeat Simple_repeat 2 29 0 2286 92 7 0 chr2 38211255 38211559 -215045024 - AluSq SINE Alu -7 306 1 752 253 116 0 chr2 38212036 38212269 -215044314 + MIR SINE MIR 2 261 -1 1628 58 0 0 chr2 38212495 38212686 -215043897 - AluY SINE Alu -120 191 1 530 157 49 20 chr2 38212687 38212712 -215043871 - AluJb SINE Alu -16 296 273 2848 7 0 0 chr2 38212712 38213020 -215043563 + AluYa5 SINE Alu 1 308 -3 530 157 49 20 chr2 38213020 38213096 -215043487 - AluJb SINE Alu -39 273 192 900 169 0 0 chr2 38213096 38213238 -215043345 - AluJo SINE Alu -170 142 1 266 363 18 26 chr2 38213345 38213458 -215043125 + MIR SINE MIR 93 204 -58 227 247 12 24 chr2 38213602 38213687 -215042896 + HsTC2 DNA Tc2 14 97 -1801 680 254 90 25 chr2 38213687 38213966 -215042617 - L1ME LINE L1 -1234 4912 4616 848 314 146 57 chr2 38213979 38214897 -215041686 + L2 LINE L2 2008 3048 -224 2211 115 0 0 chr2 38214897 38215192 -215041391 - AluSq SINE Alu -18 295 1 848 314 146 57 chr2 38215192 38215439 -215041144 + L2 LINE L2 3048 3272 0 2267 84 3 0 chr2 38215539 38215823 -215040760 - AluSg SINE Alu -25 285 1 1287 126 54 9 chr2 38215950 38216172 -215040411 + L1MA3 LINE L1 6067 6298 -7 27 0 0 0 chr2 38216422 38216449 -215040134 + AT_rich Low_complexity Low_complexity 1 27 0 2354 96 0 0 chr2 38216518 38216820 -215039763 - AluSx SINE Alu -10 302 1 734 93 9 7 chr2 38217064 38217280 -215039303 + AluSx SINE Alu 22 280 -30 800 129 0 50 chr2 38217419 38217559 -215039024 + FLAM_C SINE Alu 1 133 0 2143 94 42 3 chr2 38217565 38217851 -215038732 + AluSg SINE Alu 1 297 -13 349 304 93 19 chr2 38217863 38218024 -215038559 + MIR SINE MIR 41 213 -49 212 307 29 7 chr2 38218170 38218259 -215038324 + MIR SINE MIR 45 133 -75 235 290 50 60 chr2 38218514 38218614 -215037969 + MIR SINE MIR 164 262 0 1707 171 7 0 chr2 38219845 38220158 -215036425 + AluJb SINE Alu 1 315 0 25 31 0 0 chr2 38220265 38220297 -215036286 + AT_rich Low_complexity Low_complexity 1 32 0 287 158 72 0 chr2 38220545 38220614 -215035969 - L1ME1 LINE L1 -34 6130 6058 428 183 0 19 chr2 38220620 38220641 -215035942 - MER33 DNA MER1_type -2261 363 343 7807 126 35 19 chr2 38220641 38220990 -215035593 + HSMAR2 DNA Mariner 1 343 -959 2233 112 7 0 chr2 38220990 38221293 -215035290 + AluSx SINE Alu 1 305 -7 7807 126 35 19 chr2 38221293 38222220 -215034363 + HSMAR2 DNA Mariner 343 1298 -4 428 183 0 19 chr2 38222220 38222302 -215034281 - MER33 DNA MER1_type -2281 343 262 329 216 68 14 chr2 38222301 38222375 -215034208 - AluSq/x SINE Alu -177 125 48 * 1160 155 32 5 chr2 38222373 38222633 -215033950 - MER33 DNA MER1_type -89 235 1 2083 215 43 8 chr2 38222634 38223122 -215033461 - L1ME1 LINE L1 -143 6023 5519 354 252 44 57 chr2 38223131 38223290 -215033293 - L1MDb LINE L1 -5001 1428 1115 3125 232 85 16 chr2 38223362 38224353 -215032230 - L1MDb LINE L1 -5283 1324 266 2307 109 0 0 chr2 38224737 38225039 -215031544 + AluSq SINE Alu 1 302 -11 2022 122 48 0 chr2 38225148 38225443 -215031140 + AluSx SINE Alu 1 309 -3 748 199 0 0 chr2 38225443 38225574 -215031009 + FLAM_A SINE Alu 1 131 -2 236 229 92 42 chr2 38225627 38225752 -215030831 + MIR SINE MIR 74 205 -57 429 224 46 33 chr2 38226237 38226389 -215030194 - MER104 DNA Tc2 0 180 27 1887 172 0 0 chr2 38226569 38226865 -215029718 - AluJb SINE Alu -16 296 1 23 0 0 0 chr2 38227003 38227026 -215029557 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 38228231 38228251 -215028332 + (A)n Simple_repeat Simple_repeat 1 20 0 1729 164 0 7 chr2 38228279 38228554 -215028029 - AluJo SINE Alu -20 292 20 1914 129 3 26 chr2 38229139 38229442 -215027141 + AluSc SINE Alu 1 296 -13 2465 89 0 0 chr2 38229456 38229759 -215026824 + AluSc SINE Alu 1 303 -6 2411 97 0 0 chr2 38230109 38230420 -215026163 - AluSx SINE Alu -1 311 1 3975 181 15 24 chr2 38230646 38231386 -215025197 - MER44D DNA MER2_type 0 605 1 181 265 82 0 chr2 38232249 38232298 -215024285 + L2 LINE L2 3209 3261 -11 25 65 0 0 chr2 38232500 38232546 -215024037 + AT_rich Low_complexity Low_complexity 1 46 0 2331 64 48 0 chr2 38232565 38232860 -215023723 - AluSp SINE Alu -3 310 2 2223 106 7 0 chr2 38232861 38233163 -215023420 - AluSq SINE Alu -9 304 1 207 202 12 60 chr2 38233620 38233704 -215022879 + (TTTA)n Simple_repeat Simple_repeat 4 83 0 355 319 67 7 chr2 38233749 38233884 -215022699 + MIR3 SINE MIR 48 190 -18 780 181 0 8 chr2 38234011 38234144 -215022439 - FLAM_C SINE Alu -11 132 1 225 65 0 0 chr2 38235389 38235420 -215021163 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 618 191 18 0 chr2 38236112 38236222 -215020361 + FLAM_A SINE Alu 3 114 -19 24 67 0 0 chr2 38236247 38236292 -215020291 + AT_rich Low_complexity Low_complexity 1 45 0 566 311 70 25 chr2 38236456 38236697 -215019886 + MIR SINE MIR 8 259 -3 22 0 0 0 chr2 38237215 38237237 -215019346 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr2 38237418 38237448 -215019135 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr2 38237732 38237761 -215018822 + AT_rich Low_complexity Low_complexity 1 29 0 381 43 0 0 chr2 38237774 38237781 -215018802 + (TG)n Simple_repeat Simple_repeat 1 54 0 381 43 0 0 chr2 38237781 38237828 -215018755 + (TG)n Simple_repeat Simple_repeat 2 48 0 2139 115 20 0 chr2 38237845 38238140 -215018443 - AluSx SINE Alu -11 301 1 300 333 137 24 chr2 38238691 38238859 -215017724 + MIR3 SINE MIR 21 207 -1 217 228 35 0 chr2 38239485 38239542 -215017041 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 2136 117 0 10 chr2 38240525 38240824 -215015759 + AluSx SINE Alu 1 296 -16 355 268 268 0 chr2 38240913 38241070 -215015513 + MIR SINE MIR 2 200 -62 1665 176 3 42 chr2 38241171 38241478 -215015105 - AluJo SINE Alu -15 297 3 267 194 60 0 chr2 38241547 38241614 -215014969 - MIR SINE MIR 0 262 192 2287 117 0 7 chr2 38242187 38242494 -215014089 - AluSx SINE Alu -7 305 1 1123 153 67 24 chr2 38242660 38242869 -215013714 - AluJo SINE Alu -9 303 86 1907 144 39 0 chr2 38243705 38243989 -215012594 - AluSx SINE Alu -17 295 1 748 292 49 21 chr2 38244559 38244802 -215011781 + MIR SINE MIR 13 262 0 1958 152 0 14 chr2 38245257 38245554 -215011029 - AluSx SINE Alu -19 293 1 275 387 0 19 chr2 38245616 38245722 -215010861 + L2 LINE L2 3150 3253 -19 2120 137 0 9 chr2 38245867 38246182 -215010401 + AluSx SINE Alu 1 312 0 188 307 148 0 chr2 38246454 38246555 -215010028 + L2 LINE L2 3190 3305 -8 22 0 0 0 chr2 38248095 38248117 -215008466 + AT_rich Low_complexity Low_complexity 1 22 0 2269 104 0 7 chr2 38248281 38248580 -215008003 - AluSx SINE Alu -15 297 1 537 280 109 33 chr2 38249289 38249500 -215007083 + MIR SINE MIR 15 241 -21 191 245 19 38 chr2 38249466 38249511 -215007072 + L2 LINE L2 3253 3298 -15 * 306 0 0 0 chr2 38249511 38249545 -215007038 + (CAT)n Simple_repeat Simple_repeat 1 34 0 236 363 108 0 chr2 38249562 38249664 -215006919 - MIR SINE MIR -69 139 27 2289 98 0 10 chr2 38250057 38250364 -215006219 - AluSg SINE Alu -6 304 1 742 220 78 5 chr2 38250699 38250890 -215005693 + L1ME1 LINE L1 37 241 -6155 * 2476 240 75 7 chr2 38250887 38251763 -215004820 + L1ME1 LINE L1 3059 3994 -2221 1245 105 0 6 chr2 38251763 38251925 -215004658 - AluSx SINE Alu -151 161 1 259 247 25 0 chr2 38251926 38252007 -215004576 - L1MD2 LINE L1 -145 6214 6132 * 2781 202 61 38 chr2 38251990 38252421 -215004162 + L1ME1 LINE L1 4510 4930 -1305 2367 70 7 7 chr2 38252421 38252722 -215003861 + AluY SINE Alu 1 301 -10 2781 202 61 38 chr2 38252722 38253775 -215002808 + L1ME1 LINE L1 4930 6031 -204 22 35 0 0 chr2 38253775 38253804 -215002779 + AT_rich Low_complexity Low_complexity 1 29 0 249 190 350 30 chr2 38254561 38254661 -215001922 + L2 LINE L2 3182 3313 0 1120 216 41 25 chr2 38254693 38255012 -215001571 + MLT1C LTR MaLR 144 467 0 2042 117 10 17 chr2 38255686 38255986 -215000597 - AluSx SINE Alu -14 298 1 261 276 23 46 chr2 38256399 38256486 -215000097 + MIR SINE MIR 3 87 -175 200 378 0 31 chr2 38256592 38256690 -214999893 - MIR SINE MIR -148 114 20 349 323 126 19 chr2 38257112 38257375 -214999208 + L2 LINE L2 2109 2399 -915 2063 284 163 14 chr2 38258346 38259271 -214997312 - L2 LINE L2 -234 3079 2004 305 310 92 14 chr2 38259425 38259567 -214997016 - L2 LINE L2 -1341 1973 1821 901 60 0 0 chr2 38259604 38259721 -214996862 - L1PA5 LINE L1 -6 6148 6032 1219 261 160 32 chr2 38259867 38260434 -214996149 + HAL1 LINE L1 220 876 -1631 2219 105 0 31 chr2 38260434 38260757 -214995826 - AluSq SINE Alu 0 313 1 1219 261 160 32 chr2 38260757 38260813 -214995770 + HAL1 LINE L1 876 923 -1584 2814 96 76 5 chr2 38260824 38261270 -214995313 + MER9 LTR ERVK 34 511 0 581 275 18 42 chr2 38261357 38261524 -214995059 - L2 LINE L2 -2047 1267 1105 781 207 130 49 chr2 38263170 38263455 -214993128 + L2 LINE L2 2305 2612 -702 220 321 107 9 chr2 38263637 38263749 -214992834 + MIR SINE MIR 81 203 -59 1928 230 49 28 chr2 38264061 38264590 -214991993 - MLT1F LTR MaLR -2 593 1 2204 122 0 13 chr2 38264881 38265185 -214991398 + AluSx SINE Alu 1 300 -12 243 267 35 0 chr2 38265223 38265309 -214991274 - MLT1K LTR MaLR 0 588 500 303 276 41 16 chr2 38265367 38265490 -214991093 - MLT1K LTR MaLR -186 402 277 328 341 77 35 chr2 38265965 38266135 -214990448 + MIR3 SINE MIR 17 193 -15 234 212 12 59 chr2 38266311 38266396 -214990187 + CT-rich Low_complexity Low_complexity 5 85 0 1887 148 51 26 chr2 38266539 38266891 -214989692 - MER46B DNA MER2_type 0 236 1 239 263 126 0 chr2 38267067 38267162 -214989421 - MIR SINE MIR -56 206 100 2003 133 13 10 chr2 38268087 38268389 -214988194 + AluSx SINE Alu 3 305 -7 1120 127 29 0 chr2 38268527 38268700 -214987883 - AluSq SINE Alu -2 311 134 2155 127 7 0 chr2 38268700 38268999 -214987584 - AluSx SINE Alu -8 304 4 269 299 66 46 chr2 38269279 38269621 -214986962 + L1MEc LINE L1 1047 1400 -4996 2207 92 14 0 chr2 38269621 38269915 -214986668 + AluY SINE Alu 1 298 -13 269 299 66 46 chr2 38269915 38269983 -214986600 + L1MEc LINE L1 1400 1465 -4931 348 176 29 0 chr2 38270144 38270212 -214986371 + U6 snRNA snRNA 1 70 -37 583 194 109 30 chr2 38270575 38270740 -214985843 - MER5B DNA MER1_type 0 178 1 394 200 117 122 chr2 38271307 38271512 -214985071 - MIR SINE MIR -12 250 47 1241 166 0 5 chr2 38271664 38271895 -214984688 - AluJb SINE Alu 0 315 86 1824 109 64 67 chr2 38271898 38272210 -214984373 - AluJb SINE Alu -1 311 1 1351 250 152 42 chr2 38272212 38272977 -214983606 + L2 LINE L2 2443 3308 -5 2079 93 65 4 chr2 38273311 38273590 -214982993 - AluSc SINE Alu -13 296 1 1894 117 3 96 chr2 38274458 38274792 -214981791 + AluSx SINE Alu 1 303 -9 731 233 146 31 chr2 38275420 38275708 -214980875 + L2 LINE L2 2988 3308 -5 373 326 8 0 chr2 38275708 38275837 -214980746 - MIR3 SINE MIR -71 137 8 312 300 103 88 chr2 38277018 38277547 -214979036 + L1M2 LINE L1 526 966 -5883 307 313 209 26 chr2 38277232 38277619 -214978964 - L1M2 LINE L1 -5591 1258 801 * 270 0 0 0 chr2 38277681 38277711 -214978872 + (CA)n Simple_repeat Simple_repeat 2 31 0 209 329 73 0 chr2 38278964 38279046 -214977537 - MIR3 SINE MIR -26 182 95 540 101 0 0 chr2 38279234 38279313 -214977270 + AluJ/FLAM SINE Alu 1 79 -233 2453 97 10 79 chr2 38279321 38279724 -214976859 + MER51B LTR ERV1 2 376 -1 1549 127 5 0 chr2 38279724 38279944 -214976639 + AluSg/x SINE Alu 76 296 -16 1120 128 6 23 chr2 38280036 38280208 -214976375 + AluSx SINE Alu 3 171 -141 293 294 59 15 chr2 38280208 38280344 -214976239 + MIR SINE MIR 121 262 0 199 279 73 0 chr2 38280358 38280426 -214976157 + MIR SINE MIR 180 252 -10 2263 97 0 3 chr2 38280498 38280796 -214975787 + AluSg SINE Alu 1 297 -13 2134 113 0 13 chr2 38280798 38281107 -214975476 + AluSq SINE Alu 1 305 -8 2303 101 3 0 chr2 38281355 38281653 -214974930 - AluSq SINE Alu -14 299 1 1311 74 42 23 chr2 38282335 38282550 -214974033 + L1MA2 LINE L1 6086 6304 0 1789 147 21 4 chr2 38282568 38282847 -214973736 + AluJb SINE Alu 3 286 -26 261 0 0 0 chr2 38282848 38282877 -214973706 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 24 0 0 0 chr2 38282882 38282906 -214973677 + AT_rich Low_complexity Low_complexity 1 24 0 2140 102 23 16 chr2 38283028 38283333 -214973250 + AluSx SINE Alu 1 307 -5 285 227 91 83 chr2 38283629 38283652 -214972931 - MIR SINE MIR -11 251 230 2104 120 3 3 chr2 38283652 38283951 -214972632 + AluSg SINE Alu 1 299 -11 285 227 91 83 chr2 38283951 38284059 -214972524 - MIR SINE MIR -32 230 119 215 245 0 0 chr2 38284357 38284410 -214972173 + A-rich Low_complexity Low_complexity 1 53 0 878 193 28 47 chr2 38284695 38284949 -214971634 + L1ME1 LINE L1 5767 6015 -151 248 98 0 0 chr2 38284942 38284983 -214971600 + L1MB7 LINE L1 6127 6167 -17 * 1921 134 0 28 chr2 38285075 38285365 -214971218 + AluSx SINE Alu 1 282 -30 1186 125 0 11 chr2 38285386 38285562 -214971021 + AluSg/x SINE Alu 127 300 -10 753 240 27 14 chr2 38285767 38285988 -214970595 + L1MEc LINE L1 203 426 -6137 622 285 4 23 chr2 38285980 38286243 -214970340 + L1MEc LINE L1 1290 1547 -4837 * 1790 212 100 42 chr2 38286224 38286275 -214970308 + L1MEc LINE L1 1781 1828 -4735 2400 89 0 0 chr2 38286275 38286577 -214970006 + AluSq SINE Alu 1 302 -11 1790 212 100 42 chr2 38286577 38287185 -214969398 + L1MEc LINE L1 1828 2478 -4085 288 246 0 0 chr2 38287800 38287857 -214968726 + MER58B DNA MER1_type 1 57 -284 * 718 199 68 0 chr2 38287850 38287996 -214968587 + MER58B DNA MER1_type 182 337 -4 1079 299 180 67 chr2 38288043 38289315 -214967268 + L2 LINE L2 983 2580 -692 395 123 0 0 chr2 38289315 38289372 -214967211 + U6 snRNA snRNA 1 57 -50 1079 299 180 67 chr2 38289372 38289908 -214966675 + L2 LINE L2 2580 3054 -218 1722 168 10 27 chr2 38290374 38290672 -214965911 - AluJo SINE Alu -19 293 1 22 35 0 0 chr2 38290833 38290862 -214965721 + AT_rich Low_complexity Low_complexity 1 29 0 484 281 15 40 chr2 38291087 38291247 -214965336 + MIR3 SINE MIR 2 160 -66 2426 60 0 3 chr2 38291299 38291599 -214964984 + AluY SINE Alu 1 299 -12 387 41 0 0 chr2 38291609 38291658 -214964925 + (TA)n Simple_repeat Simple_repeat 1 49 0 183 114 0 0 chr2 38293429 38293464 -214963119 + (A)n Simple_repeat Simple_repeat 1 35 0 2063 137 10 16 chr2 38293624 38293938 -214962645 + AluSx SINE Alu 1 312 0 26 0 0 0 chr2 38294832 38294858 -214961725 + AT_rich Low_complexity Low_complexity 1 26 0 230 268 18 0 chr2 38295513 38295569 -214961014 - L2 LINE L2 -9 3263 3207 251 289 14 113 chr2 38295711 38295853 -214960730 - L2 LINE L2 -199 3073 2946 21 0 0 0 chr2 38296272 38296293 -214960290 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr2 38296602 38296633 -214959950 + AT_rich Low_complexity Low_complexity 1 31 0 2353 101 3 0 chr2 38296741 38297049 -214959534 + AluSp SINE Alu 1 309 -4 262 298 165 54 chr2 38297092 38297180 -214959403 + L2 LINE L2 1698 1775 -1539 2168 113 0 0 chr2 38297180 38297471 -214959112 + AluSc SINE Alu 2 292 -17 262 298 165 54 chr2 38297471 38297878 -214958705 + L2 LINE L2 1775 2248 -1066 237 333 156 52 chr2 38297965 38298253 -214958330 + L2 LINE L2 2432 2749 -565 762 232 170 35 chr2 38298255 38298596 -214957987 + L1MC4 LINE L1 7632 8018 -24 1617 220 0 0 chr2 38298621 38298926 -214957657 + AluJo SINE Alu 1 305 -7 2214 97 17 0 chr2 38299251 38299540 -214957043 + AluSc SINE Alu 1 294 -15 1908 133 27 7 chr2 38299552 38299845 -214956738 + AluSx SINE Alu 1 299 -13 264 171 0 40 chr2 38300002 38300078 -214956505 + GA-rich Low_complexity Low_complexity 4 76 0 1524 187 10 34 chr2 38300175 38300469 -214956114 + AluJb SINE Alu 4 290 -22 756 298 66 68 chr2 38300558 38301146 -214955437 + L1MEc LINE L1 141 727 -5669 190 275 169 48 chr2 38301759 38301915 -214954668 - L2 LINE L2 -1069 2245 2061 1740 141 33 30 chr2 38301915 38302214 -214954369 + AluSx SINE Alu 1 300 -12 190 275 169 48 chr2 38302214 38302246 -214954337 - L2 LINE L2 -1253 2061 2034 1487 122 22 97 chr2 38302276 38302423 -214954160 - L1MB5 LINE L1 -205 5969 5812 1886 59 62 11 chr2 38302423 38302696 -214953887 - AluY SINE Alu -24 287 1 1487 122 22 97 chr2 38302696 38302918 -214953665 - L1MB5 LINE L1 -362 5812 5628 667 279 168 26 chr2 38303735 38304183 -214952400 - L2 LINE L2 -89 3224 2702 309 198 0 0 chr2 38304321 38304417 -214952166 + A-rich Low_complexity Low_complexity 1 96 0 191 136 62 0 chr2 38304464 38304545 -214952038 + (CACAC)n Simple_repeat Simple_repeat 3 88 0 5720 87 11 2 chr2 38304681 38305499 -214951084 + HERVFH19I LTR ERV1 6792 7616 -103 877 211 6 17 chr2 38305666 38305846 -214950737 - FRAM SINE Alu -6 170 1 25 51 0 0 chr2 38305960 38305999 -214950584 + AT_rich Low_complexity Low_complexity 1 39 0 2176 81 0 23 chr2 38306209 38306519 -214950064 + AluSc SINE Alu 1 303 -6 266 241 51 58 chr2 38306524 38306661 -214949922 + MLT1J LTR MaLR 374 509 -2 1352 147 9 14 chr2 38307306 38307524 -214949059 - AluJb SINE Alu -15 297 81 323 235 0 12 chr2 38307524 38307605 -214948978 + MER103 DNA DNA 77 156 -10 2019 105 11 11 chr2 38307773 38308097 -214948486 - AluSx SINE Alu 0 324 1 2308 244 115 23 chr2 38308166 38309165 -214947418 + L2 LINE L2 1975 3062 -251 598 253 0 0 chr2 38309165 38309319 -214947264 - FRAM SINE Alu -2 174 21 1519 159 12 8 chr2 38309507 38309765 -214946818 - AluJb SINE Alu -13 299 41 2196 101 16 0 chr2 38309777 38310085 -214946498 - AluSp SINE Alu 0 313 1 804 272 120 62 chr2 38310125 38310516 -214946067 + MLT1G3 LTR MaLR 13 460 -107 378 252 19 28 chr2 38310605 38310712 -214945871 + MIR3 SINE MIR 61 166 -42 1701 181 0 11 chr2 38311530 38311817 -214944766 - AluJb SINE Alu -28 284 1 1991 141 7 0 chr2 38312220 38312517 -214944066 - AluJb SINE Alu -13 299 1 2142 84 18 7 chr2 38312522 38312806 -214943777 - AluSc SINE Alu -22 287 1 278 265 20 48 chr2 38312813 38312960 -214943623 - L1ME LINE L1 -299 5822 5680 1641 158 4 4 chr2 38312976 38313235 -214943348 - AluJb SINE Alu -13 299 41 2249 100 10 3 chr2 38313247 38313558 -214943025 - AluSp SINE Alu 0 313 1 804 285 50 50 chr2 38313598 38314081 -214942502 + MLT1G3 LTR MaLR 13 560 -7 447 221 19 19 chr2 38314093 38314197 -214942386 + MIR3 SINE MIR 73 176 -32 1672 82 137 4 chr2 38315375 38315630 -214940953 + AluSx SINE Alu 1 289 -23 234 176 72 24 chr2 38315932 38316057 -214940526 + (TAA)n Simple_repeat Simple_repeat 1 131 0 403 268 98 45 chr2 38316630 38316968 -214939615 - L1 LINE L1 -2841 3305 2896 564 195 0 34 chr2 38317024 38317142 -214939441 + FLAM_C SINE Alu 11 124 -19 203 161 0 0 chr2 38317658 38317689 -214938894 + (TG)n Simple_repeat Simple_repeat 2 32 0 2196 116 0 0 chr2 38317765 38318059 -214938524 - AluSx SINE Alu -18 294 1 912 99 70 7 chr2 38318638 38318780 -214937803 + AluSc SINE Alu 152 302 -7 452 302 119 7 chr2 38319051 38319329 -214937254 + HERVL LTR ERVL 3868 4176 -1478 601 148 6 9 chr2 38319691 38319858 -214936725 + MLT1A1 LTR MaLR 2 211 -163 2269 117 7 0 chr2 38319858 38320211 -214936372 + AluSx SINE Alu 1 355 0 436 279 84 0 chr2 38320361 38320576 -214936007 - L1ME LINE L1 -663 5501 5269 663 164 15 15 chr2 38320667 38320801 -214935782 - FLAM_C SINE Alu -4 139 6 2255 88 7 0 chr2 38321029 38321326 -214935257 + AluSg SINE Alu 1 299 -11 23 0 0 0 chr2 38321944 38321967 -214934616 + AT_rich Low_complexity Low_complexity 1 23 0 1292 186 0 21 chr2 38321991 38322233 -214934350 - AluJb SINE Alu -9 303 67 2170 110 3 3 chr2 38322233 38322523 -214934060 + AluSg SINE Alu 1 290 -20 271 241 0 0 chr2 38322624 38322678 -214933905 + Tigger3(Golem) DNA MER2_type 2985 3038 0 * 795 174 0 0 chr2 38322678 38322809 -214933774 - MER2 DNA MER2_type -214 131 1 1997 58 68 0 chr2 38323659 38323985 -214932598 - L1PA4 LINE L1 -3 6152 5805 551 146 126 0 chr2 38324364 38324467 -214932116 + AluSq/x SINE Alu 1 116 -196 2561 166 68 72 chr2 38328050 38328819 -214927764 + Tigger6a DNA MER2_type 2 758 -325 316 356 104 0 chr2 38329114 38329229 -214927354 + MIR SINE MIR 20 146 -116 2065 118 3 19 chr2 38329263 38329576 -214927007 - AluSg1 SINE Alu -1 308 1 266 273 18 25 chr2 38329807 38329947 -214926636 + MLT1L LTR MaLR 3 142 -369 2175 107 3 3 chr2 38329967 38330257 -214926326 + AluSx SINE Alu 1 290 -22 1380 113 247 8 chr2 38330297 38330536 -214926047 + AluSg SINE Alu 1 296 -4 238 220 0 0 chr2 38330999 38331049 -214925534 + (TAA)n Simple_repeat Simple_repeat 3 52 0 2329 97 10 0 chr2 38331058 38331357 -214925226 + AluSx SINE Alu 1 302 -10 588 211 192 6 chr2 38331359 38331515 -214925068 - MIR SINE MIR -16 246 62 433 206 0 69 chr2 38331522 38331653 -214924930 + MER3 DNA MER1_type 41 162 -47 1136 200 99 0 chr2 38331663 38332018 -214924565 + MER3 DNA MER1_type 2235 2624 0 337 289 52 60 chr2 38332838 38333070 -214923513 - L2 LINE L2 -1 3312 3083 522 328 53 3 chr2 38333255 38333575 -214923008 + L2 LINE L2 2640 2975 -339 2228 110 0 0 chr2 38333703 38333993 -214922590 - AluSx SINE Alu -11 301 12 238 297 31 23 chr2 38334778 38334906 -214921677 + MER112 DNA MER1_type 119 247 -13 531 203 28 28 chr2 38336224 38336367 -214920216 + L1MEc LINE L1 1836 1978 -4418 326 297 118 9 chr2 38336367 38336596 -214919987 + L1MB5 LINE L1 5564 5817 -345 33 56 0 0 chr2 38336611 38336665 -214919918 + AT_rich Low_complexity Low_complexity 1 54 0 672 169 6 88 chr2 38336715 38336840 -214919743 + L1MB5 LINE L1 6012 6117 -54 2428 76 0 7 chr2 38336840 38337144 -214919439 + AluSq SINE Alu 1 302 -11 672 169 6 88 chr2 38337144 38337195 -214919388 + L1MB5 LINE L1 6117 6171 0 464 238 70 35 chr2 38337373 38337545 -214919038 + L2 LINE L2 1933 2110 -1204 943 240 0 5 chr2 38337561 38337761 -214918822 - MER58A DNA MER1_type 0 224 26 1106 290 56 31 chr2 38337765 38338251 -214918332 - L2 LINE L2 -49 3264 2766 587 60 12 0 chr2 38338251 38338335 -214918248 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 2313 68 3 7 chr2 38338684 38338978 -214917605 - AluY SINE Alu -18 293 1 288 265 62 6 chr2 38338980 38339142 -214917441 + Charlie1 DNA MER1_type 2590 2760 -1 1742 161 10 16 chr2 38339178 38339482 -214917101 - AluJb SINE Alu -10 302 1 243 194 10 87 chr2 38340636 38340739 -214915844 - L1MC5 LINE L1 -30 7931 7837 540 228 277 0 chr2 38341118 38341320 -214915263 - MIR SINE MIR 0 262 5 1906 156 0 14 chr2 38341470 38341765 -214914818 - AluJb SINE Alu -21 291 1 2318 103 0 3 chr2 38342640 38342941 -214913642 - AluSx SINE Alu -12 300 1 239 336 71 14 chr2 38343823 38343963 -214912620 - L2 LINE L2 -920 2394 2247 791 233 140 84 chr2 38344294 38344595 -214911988 - L2 LINE L2 -720 2594 2258 2270 80 10 17 chr2 38344595 38344897 -214911686 + AluY SINE Alu 1 300 -11 791 233 140 84 chr2 38344897 38345046 -214911537 - L2 LINE L2 -1056 2258 2119 1510 224 97 32 chr2 38345051 38345342 -214911241 + Charlie4a DNA MER1_type 2 337 -1624 1837 170 0 16 chr2 38345342 38345648 -214910935 - AluSx SINE Alu -11 301 1 1510 224 97 32 chr2 38345648 38345830 -214910753 + Charlie4a DNA MER1_type 337 506 -2 701 258 127 64 chr2 38346505 38347022 -214909561 + L2 LINE L2 2598 3149 -164 1611 120 0 0 chr2 38347026 38347251 -214909332 - AluSc SINE Alu -1 308 84 474 287 33 96 chr2 38347719 38348090 -214908493 - L2 LINE L2 -223 3049 2034 962 111 0 0 chr2 38348437 38348563 -214908020 + AluSx SINE Alu 2 127 -186 503 55 55 0 chr2 38348563 38348636 -214907947 + MADE1 DNA Mariner 1 77 -3 1219 137 0 0 chr2 38348636 38348811 -214907772 + AluSx SINE Alu 126 300 -12 425 262 153 70 chr2 38349013 38349242 -214907341 - L3 LINE CR1 -3 1574 1327 1999 121 7 7 chr2 38349383 38349680 -214906903 + AluJo SINE Alu 1 297 -15 530 338 192 25 chr2 38349914 38350159 -214906424 - L3 LINE CR1 -757 820 617 1890 171 0 0 chr2 38350159 38350463 -214906120 - AluSx SINE Alu -8 304 1 530 338 192 25 chr2 38350463 38350806 -214905777 - L3 LINE CR1 -960 617 134 1949 113 22 0 chr2 38351807 38352109 -214904474 + AluY SINE Alu 1 308 0 273 263 6 103 chr2 38352654 38352810 -214903773 + MLT1J LTR MaLR 325 465 -46 331 313 38 31 chr2 38353135 38353295 -214903288 - MIR SINE MIR -5 257 97 1291 281 67 18 chr2 38353297 38353788 -214902795 - LTR38 LTR ERV1 -41 515 1 216 0 0 0 chr2 38353967 38353991 -214902592 + (A)n Simple_repeat Simple_repeat 1 24 0 1013 230 16 24 chr2 38354113 38354425 -214902158 - LTR28 LTR ERV1 -141 495 342 471 248 12 14 chr2 38354430 38354652 -214901931 + LTR28 LTR ERV1 564 827 -193 312 155 0 119 chr2 38354908 38354992 -214901591 - HsTC2 DNA Tc2 -1820 78 5 191 151 75 38 chr2 38355034 38355087 -214901496 - MIR SINE MIR -100 162 108 1935 134 3 24 chr2 38355885 38356175 -214900408 + AluSx SINE Alu 3 286 -26 21 36 0 0 chr2 38356175 38356203 -214900380 + AT_rich Low_complexity Low_complexity 1 28 0 876 69 0 0 chr2 38356277 38356393 -214900190 + (GAA)n Simple_repeat Simple_repeat 2 117 0 324 183 50 0 chr2 38356888 38356948 -214899635 - Alu SINE Alu -7 294 232 1093 100 0 7 chr2 38356949 38357089 -214899494 - AluSq/x SINE Alu -173 139 1 2072 133 0 10 chr2 38357540 38357552 -214899031 - AluSx SINE Alu -14 298 287 903 67 0 0 chr2 38357552 38357671 -214898912 + (TTCC)n Simple_repeat Simple_repeat 1 119 0 2072 133 0 10 chr2 38357671 38357959 -214898624 - AluSx SINE Alu -25 287 1 247 125 0 0 chr2 38358047 38358087 -214898496 + MLT1A1 LTR MaLR 4 43 -322 362 175 93 52 chr2 38358512 38358536 -214898047 - MER5A DNA MER1_type -80 109 87 2234 83 0 20 chr2 38358536 38358836 -214897747 - AluY SINE Alu -17 294 1 362 175 93 52 chr2 38358836 38358908 -214897675 - MER5A DNA MER1_type -102 87 9 224 320 144 7 chr2 38358949 38359102 -214897481 + MIR SINE MIR 37 210 -52 300 251 243 22 chr2 38359714 38359981 -214896602 + LTR65 LTR ERV1 323 648 -21 229 103 51 0 chr2 38360083 38360122 -214896461 - tRNA-Gly-GGA tRNA tRNA -34 41 1 2059 94 31 3 chr2 38360299 38360586 -214895997 + AluSx SINE Alu 1 295 -17 1898 129 7 3 chr2 38360588 38360891 -214895692 + AluSx SINE Alu 1 304 -8 1221 120 112 56 chr2 38361593 38361826 -214894757 + AluJo SINE Alu 13 258 -54 1117 157 47 178 chr2 38363262 38363600 -214892983 + AluJo SINE Alu 1 294 -8 2392 112 0 0 chr2 38365072 38365414 -214891169 + AluSx SINE Alu 1 342 0 1738 200 147 7 chr2 38366277 38366749 -214889834 - L1MB7 LINE L1 -1 6183 5660 445 104 15 30 chr2 38366964 38366980 -214889603 - AluJo SINE Alu -163 149 134 2437 92 0 0 chr2 38366980 38367285 -214889298 - AluSc SINE Alu -4 305 1 445 104 15 30 chr2 38367285 38367335 -214889248 - AluJo SINE Alu -178 134 84 2854 87 95 7 chr2 38367933 38368345 -214888238 + LTR7 LTR ERV1 1 448 -2 599 153 20 0 chr2 38368732 38368830 -214887753 + MLT2B3 LTR ERVL 101 200 -354 442 59 0 15 chr2 38368866 38368934 -214887649 + L1PBa LINE L1 1 67 -6796 15136 170 40 9 chr2 38368958 38369063 -214887520 + L1PB1 LINE L1 2527 2627 -4240 1942 156 7 0 chr2 38369063 38369365 -214887218 - AluSx SINE Alu -8 304 1 15136 170 40 9 chr2 38369365 38373481 -214883102 + L1PB1 LINE L1 2627 6862 -5 249 221 116 0 chr2 38374858 38374944 -214881639 + MER103 DNA DNA 64 159 -7 1062 142 74 159 chr2 38375461 38375770 -214880813 + AluJo SINE Alu 16 298 -14 2042 143 0 7 chr2 38376116 38376423 -214880160 - AluSx SINE Alu -7 305 1 267 267 267 9 chr2 38378190 38378295 -214878288 + MIR3 SINE MIR 42 173 -35 361 207 82 59 chr2 38378537 38378672 -214877911 + L1MC5 LINE L1 7794 7931 -30 1780 161 7 16 chr2 38379825 38380130 -214876453 + AluJb SINE Alu 1 302 -10 3639 199 149 50 chr2 38380166 38380330 -214876253 - Charlie1 DNA MER1_type -1 2760 2614 2589 68 0 0 chr2 38380330 38380641 -214875942 + AluY SINE Alu 1 311 0 3639 199 149 50 chr2 38380641 38380695 -214875888 - Charlie1 DNA MER1_type -147 2614 2567 2582 64 0 0 chr2 38380695 38381006 -214875577 + AluY SINE Alu 1 311 0 3639 199 149 50 chr2 38381006 38381336 -214875247 - Charlie1 DNA MER1_type -194 2567 2271 1590 126 142 8 chr2 38381336 38381590 -214874993 + AluSx SINE Alu 6 293 -19 3639 199 149 50 chr2 38381590 38382367 -214874216 - Charlie1 DNA MER1_type -490 2271 1 2343 89 0 0 chr2 38382746 38383039 -214873544 + AluSc SINE Alu 1 293 -16 1827 154 0 20 chr2 38383418 38383711 -214872872 + AluJb SINE Alu 1 287 -25 1722 168 16 16 chr2 38383747 38384056 -214872527 + AluJo SINE Alu 1 309 -3 2261 96 0 0 chr2 38384711 38384991 -214871592 + AluSx SINE Alu 1 280 -32 195 42 0 0 chr2 38384991 38385015 -214871568 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 276 216 81 0 chr2 38385554 38385628 -214870955 - MIR SINE MIR -86 176 97 262 229 43 43 chr2 38386799 38386869 -214869714 + L2 LINE L2 3200 3269 -44 255 305 152 48 chr2 38386861 38387130 -214869453 - L3 LINE CR1 -288 1289 993 * 318 26 0 0 chr2 38387749 38387788 -214868795 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 223 368 0 0 chr2 38387936 38388023 -214868560 + MIR SINE MIR 25 111 -151 8308 55 1 0 chr2 38388027 38388992 -214867591 + LTR5 LTR ERVK 1 966 -3 242 214 0 0 chr2 38389171 38389213 -214867370 + MIR SINE MIR 60 101 -161 193 313 45 0 chr2 38389217 38389284 -214867299 - MIR SINE MIR -77 185 116 317 314 69 0 chr2 38389327 38389429 -214867154 - MIR SINE MIR -151 111 3 339 214 120 34 chr2 38389706 38389823 -214866760 + L2 LINE L2 3183 3309 -4 195 42 0 0 chr2 38391930 38391954 -214864629 + (CA)n Simple_repeat Simple_repeat 2 25 0 1369 246 52 75 chr2 38392074 38392433 -214864150 + L1MC4a LINE L1 5307 5646 -2162 1408 152 82 30 chr2 38392433 38392703 -214863880 - AluJb SINE Alu -28 284 1 1369 246 52 75 chr2 38392703 38392984 -214863599 + L1MC4a LINE L1 5646 5932 -1876 793 282 159 18 chr2 38393220 38393731 -214862852 + L2 LINE L2 2630 3224 -89 780 233 140 84 chr2 38395756 38396057 -214860526 - L2 LINE L2 -720 2594 2258 2341 75 20 0 chr2 38396057 38396350 -214860233 + AluSg SINE Alu 1 299 -11 780 233 140 84 chr2 38396350 38396499 -214860084 - L2 LINE L2 -1056 2258 2119 1478 215 97 34 chr2 38396504 38396796 -214859787 + Charlie4a DNA MER1_type 2 337 -1624 1823 177 0 7 chr2 38396796 38397101 -214859482 - AluSx SINE Alu -9 303 1 1478 215 97 34 chr2 38397101 38397283 -214859300 + Charlie4a DNA MER1_type 337 506 -2 733 178 0 0 chr2 38397985 38398114 -214858469 - L1ME3A LINE L1 -7 6163 6035 2196 94 0 14 chr2 38398349 38398667 -214857916 - AluY SINE Alu 0 314 1 351 235 20 59 chr2 38399094 38399204 -214857379 + GA-rich Low_complexity Low_complexity 6 110 -42 2360 69 0 16 chr2 38399204 38399508 -214857075 + AluY SINE Alu 1 299 -12 351 235 20 59 chr2 38399508 38399550 -214857033 + GA-rich Low_complexity Low_complexity 110 152 0 2298 102 3 0 chr2 38399675 38399979 -214856604 - AluSp SINE Alu -8 305 1 1336 249 43 85 chr2 38400770 38400867 -214855716 + L1ME3A LINE L1 5011 5110 -1060 1974 82 36 75 chr2 38400867 38401173 -214855410 + AluSg SINE Alu 1 294 -16 783 137 0 65 chr2 38401178 38401317 -214855266 + FLAM_C SINE Alu 1 130 -3 1336 249 43 85 chr2 38401317 38401816 -214854767 + L1ME3A LINE L1 5114 5557 -613 2061 154 0 0 chr2 38401816 38402128 -214854455 - AluSx SINE Alu 0 312 1 1336 249 43 85 chr2 38402128 38402508 -214854075 + L1ME3A LINE L1 5557 5951 -219 1507 176 103 0 chr2 38402858 38403130 -214853453 + AluJb SINE Alu 1 300 -12 27 0 0 0 chr2 38403204 38403231 -214853352 + AT_rich Low_complexity Low_complexity 1 27 0 820 156 0 0 chr2 38405707 38405835 -214850748 - FLAM_A SINE Alu -5 128 1 2095 133 0 3 chr2 38405878 38406179 -214850404 + AluSx SINE Alu 1 300 -12 310 212 263 0 chr2 38407042 38407141 -214849442 - MIR SINE MIR 0 262 138 248 243 340 28 chr2 38407792 38407936 -214848647 - MIR SINE MIR -40 222 34 244 136 68 51 chr2 38408333 38408392 -214848191 - L2 LINE L2 0 3313 3254 398 272 72 33 chr2 38409452 38409582 -214847001 - MER5A DNA MER1_type -2 187 47 2058 129 31 47 chr2 38409582 38409968 -214846615 - L1PA16 LINE L1 0 6166 5787 398 272 72 33 chr2 38409968 38410017 -214846566 - MER5A DNA MER1_type -142 47 1 204 302 32 0 chr2 38410682 38410745 -214845838 - MER5A DNA MER1_type -116 73 9 2220 106 3 0 chr2 38411342 38411634 -214844949 + AluSp SINE Alu 1 293 -20 1416 98 0 0 chr2 38412078 38412262 -214844321 + AluSq SINE Alu 75 258 -55 405 0 0 0 chr2 38412268 38412313 -214844270 + (CA)n Simple_repeat Simple_repeat 2 46 0 315 0 0 0 chr2 38412353 38412388 -214844195 + (CA)n Simple_repeat Simple_repeat 2 36 0 1007 106 82 12 chr2 38412684 38412854 -214843729 - MER30 DNA MER1_type -48 182 1 24 53 0 0 chr2 38413904 38413942 -214842641 + AT_rich Low_complexity Low_complexity 1 38 0 523 255 120 30 chr2 38414009 38414209 -214842374 + MIR SINE MIR 1 218 -44 239 296 53 61 chr2 38414408 38414540 -214842043 - MIR SINE MIR -69 193 63 24 0 0 0 chr2 38414685 38414709 -214841874 + AT_rich Low_complexity Low_complexity 1 24 0 195 69 0 0 chr2 38415544 38415573 -214841010 + (TA)n Simple_repeat Simple_repeat 1 29 0 21 36 0 0 chr2 38416621 38416649 -214839934 + AT_rich Low_complexity Low_complexity 1 28 0 642 216 312 0 chr2 38417209 38417408 -214839175 + MIR SINE MIR 2 262 0 1790 169 13 25 chr2 38418433 38418747 -214837836 + AluJb SINE Alu 1 310 -2 187 196 22 0 chr2 38418929 38418975 -214837608 - L2 LINE L2 -417 2855 2809 279 0 0 0 chr2 38419338 38419369 -214837214 + (T)n Simple_repeat Simple_repeat 1 31 0 290 182 216 23 chr2 38419988 38420076 -214836507 + L2 LINE L2 3163 3267 -5 2468 74 0 6 chr2 38420093 38420404 -214836179 + AluY SINE Alu 1 309 -2 270 297 31 23 chr2 38421691 38421819 -214834764 - MER112 DNA MER1_type -13 247 119 2079 132 3 3 chr2 38422592 38422887 -214833696 + AluSx SINE Alu 1 295 -17 2158 126 0 0 chr2 38423914 38424208 -214832375 + AluSx SINE Alu 1 294 -18 2423 71 3 0 chr2 38424208 38424503 -214832080 + AluSp SINE Alu 1 296 -17 1533 143 96 35 chr2 38424505 38424848 -214831735 + MER47A DNA MER2_type 1 364 -2 724 275 180 48 chr2 38425482 38426125 -214830458 - L1M4 LINE L1 -2688 3458 2731 1217 299 30 30 chr2 38427005 38427443 -214829140 - L2 LINE L2 0 3313 2876 213 197 0 82 chr2 38427613 38427674 -214828909 + L3 LINE CR1 1519 1574 -3 246 32 0 0 chr2 38428198 38428229 -214828354 + (CA)n Simple_repeat Simple_repeat 2 32 0 205 301 72 12 chr2 38428259 38428342 -214828241 + MIR SINE MIR 20 107 -155 1172 123 0 0 chr2 38429037 38429199 -214827384 - AluSp SINE Alu -15 298 137 2058 134 0 3 chr2 38429199 38429497 -214827086 - AluSq SINE Alu -16 297 1 231 306 59 24 chr2 38430766 38430851 -214825732 - L2 LINE L2 0 3313 3226 333 331 69 70 chr2 38431122 38431745 -214824838 - L2 LINE L2 -10 3262 2587 354 295 80 46 chr2 38431754 38431929 -214824654 - MIR SINE MIR -46 216 38 2225 105 3 0 chr2 38432655 38432951 -214823632 + AluSp SINE Alu 1 297 -16 1343 217 76 3 chr2 38433952 38434212 -214822371 + MER58B DNA MER1_type 1 289 -2131 1866 146 56 9 chr2 38434212 38434534 -214822049 + MER1B DNA MER1_type 1 337 0 1343 217 76 3 chr2 38434534 38434587 -214821996 + MER58B DNA MER1_type 289 337 -4 207 319 51 97 chr2 38434614 38434871 -214821712 + L2 LINE L2 2869 3113 -159 21 0 0 0 chr2 38434902 38434923 -214821660 + AT_rich Low_complexity Low_complexity 1 21 0 270 132 75 0 chr2 38435289 38435342 -214821241 + L1MC/D LINE L1 5747 5803 -2005 1476 151 36 4 chr2 38435437 38435689 -214820894 + AluJo SINE Alu 23 282 -30 338 279 299 0 chr2 38436770 38436924 -214819659 - MIR SINE MIR -34 228 29 188 196 0 20 chr2 38438810 38438861 -214817722 + (CATA)n Simple_repeat Simple_repeat 1 50 0 1110 281 47 7 chr2 38438878 38439330 -214817253 - L1MC/D LINE L1 -757 5389 5192 302 264 66 11 chr2 38439468 38439559 -214817024 - L1MC4 LINE L1 -1333 6709 6614 259 255 21 32 chr2 38439559 38439653 -214816930 - L1MC/D LINE L1 -1191 4955 4863 949 220 116 22 chr2 38439876 38440108 -214816475 - MIR SINE MIR -7 255 2 2362 82 3 0 chr2 38441368 38441671 -214814912 + AluSc SINE Alu 3 306 -3 2269 91 27 0 chr2 38442758 38443054 -214813529 - AluSq SINE Alu -9 304 1 2185 190 46 8 chr2 38443181 38443879 -214812704 + L1M4 LINE L1 4834 5561 -617 241 61 0 0 chr2 38443875 38443908 -214812675 - L1M LINE L1 -701 5420 5388 * 1510 167 145 19 chr2 38444101 38444425 -214812158 + MLT1A1 LTR MaLR 1 365 0 903 222 91 17 chr2 38444708 38444938 -214811645 + MIR SINE MIR 8 254 -8 210 119 0 153 chr2 38445459 38445518 -214811065 + MIR SINE MIR 97 146 -62 590 150 88 18 chr2 38445899 38446012 -214810571 + MER5A DNA MER1_type 1 121 -68 480 129 0 13 chr2 38446414 38446631 -214809952 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr2 38446966 38446988 -214809595 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr2 38447486 38447507 -214809076 + AT_rich Low_complexity Low_complexity 1 21 0 1230 20 14 0 chr2 38447507 38447654 -214808929 - L1PA4 LINE L1 -4 6151 6003 267 385 21 0 chr2 38448407 38448503 -214808080 + MIR SINE MIR 13 110 -152 274 200 0 35 chr2 38448524 38448609 -214807974 + (CTA)n Simple_repeat Simple_repeat 1 82 0 207 312 64 0 chr2 38449315 38449424 -214807159 - MIR SINE MIR -13 249 134 2533 70 3 0 chr2 38449658 38450001 -214806582 + AluSp SINE Alu 1 344 0 189 171 0 0 chr2 38450064 38450099 -214806484 + T-rich Low_complexity Low_complexity 2 36 0 317 250 75 0 chr2 38450356 38450436 -214806147 + L2 LINE L2 3227 3312 -1 337 284 11 11 chr2 38451380 38451475 -214805108 + MIR SINE MIR 44 138 -70 2222 98 0 13 chr2 38451491 38451797 -214804786 + AluSg SINE Alu 9 310 0 22 56 0 0 chr2 38452242 38452278 -214804305 + AT_rich Low_complexity Low_complexity 1 36 0 744 171 196 0 chr2 38452428 38452586 -214803997 + MER5A DNA MER1_type 1 189 0 1171 177 25 0 chr2 38452635 38452838 -214803745 + MER58B DNA MER1_type 131 338 -3 2244 81 3 17 chr2 38452945 38453243 -214803340 - AluSq SINE Alu -19 294 1 255 336 86 23 chr2 38453366 38453494 -214803089 - MIR3 SINE MIR -66 142 7 2385 63 7 10 chr2 38455052 38455355 -214801228 - AluY SINE Alu -9 302 1 1585 164 27 37 chr2 38455355 38455654 -214800929 - AluJb SINE Alu -14 298 3 1701 159 14 14 chr2 38456816 38457105 -214799478 - AluJo SINE Alu -23 289 1 27 29 0 0 chr2 38457114 38457148 -214799435 + AT_rich Low_complexity Low_complexity 1 34 0 34 65 0 0 chr2 38457352 38457414 -214799169 + AT_rich Low_complexity Low_complexity 1 62 0 1981 149 0 13 chr2 38457502 38457803 -214798780 + AluSx SINE Alu 1 297 -15 273 326 42 0 chr2 38457872 38457967 -214798616 - L2 LINE L2 -51 3221 3123 22 0 0 0 chr2 38457989 38458011 -214798572 + AT_rich Low_complexity Low_complexity 1 22 0 488 289 23 35 chr2 38458257 38458441 -214798142 + MIR SINE MIR 42 221 -41 2339 78 0 10 chr2 38459325 38459633 -214796950 + AluY SINE Alu 1 305 -6 214 311 74 33 chr2 38459863 38459985 -214796598 - MER5A DNA MER1_type 0 189 63 3926 168 43 20 chr2 38460032 38460828 -214795755 - L1MC3 LINE L1 -2 7783 6970 27 0 0 0 chr2 38460836 38460863 -214795720 + AT_rich Low_complexity Low_complexity 1 27 0 461 152 123 51 chr2 38461015 38461153 -214795430 - L1MC3 LINE L1 -1866 5942 5795 330 266 174 0 chr2 38461168 38461277 -214795306 + MIR SINE MIR 77 204 -58 3913 166 4 9 chr2 38461290 38461978 -214794605 - L1 LINE L1 -1650 4496 3812 461 254 0 0 chr2 38461975 38462097 -214794486 + L1MA4 LINE L1 5039 5160 -986 * 750 179 8 0 chr2 38462097 38462220 -214794363 + AluSq/x SINE Alu 1 124 -189 441 0 0 0 chr2 38462221 38462270 -214794313 + (CA)n Simple_repeat Simple_repeat 2 50 0 5968 139 23 9 chr2 38462270 38463390 -214793193 + L1MA4 LINE L1 5161 6300 0 888 273 84 20 chr2 38463434 38463826 -214792757 - L1MC3 LINE L1 -2075 5733 5317 789 203 33 0 chr2 38464154 38464307 -214792276 - AluJo SINE Alu -8 294 137 703 190 190 0 chr2 38464558 38464742 -214791841 + MER20 DNA MER1_type 1 219 0 649 167 15 45 chr2 38465435 38465532 -214791051 - AluJo SINE Alu -184 128 34 2296 208 208 54 chr2 38465532 38466416 -214790167 + LTR28 LTR ERV1 1 1020 0 649 167 15 45 chr2 38466416 38466450 -214790133 - AluJo SINE Alu -278 34 1 359 289 37 7 chr2 38466533 38466668 -214789915 - L1ME3 LINE L1 -8 6154 6016 222 277 145 12 chr2 38466826 38466909 -214789674 + L2 LINE L2 3200 3293 -20 2181 122 10 3 chr2 38467168 38467479 -214789104 + AluSq SINE Alu 1 313 0 344 240 190 10 chr2 38468545 38468740 -214787843 - MIR SINE MIR -18 244 25 1944 143 3 3 chr2 38469236 38469536 -214787047 + AluJb SINE Alu 1 300 -12 953 173 120 0 chr2 38469714 38469905 -214786678 - MER20 DNA MER1_type 0 219 6 1918 106 3 93 chr2 38471142 38471464 -214785119 - AluSq SINE Alu -20 293 1 33 25 0 0 chr2 38471858 38471898 -214784685 + AT_rich Low_complexity Low_complexity 1 40 0 2332 86 0 10 chr2 38472274 38472577 -214784006 + AluSc SINE Alu 1 300 -9 499 308 201 5 chr2 38473011 38473225 -214783358 - MIR SINE MIR -5 257 2 210 248 9 138 chr2 38473247 38473356 -214783227 - L2 LINE L2 0 3272 3178 293 281 94 16 chr2 38474068 38474196 -214782387 + L2 LINE L2 3171 3308 -5 24 53 0 0 chr2 38474343 38474381 -214782202 + AT_rich Low_complexity Low_complexity 1 38 0 308 270 196 0 chr2 38474501 38474649 -214781934 - MER5B DNA MER1_type -1 177 1 2312 173 23 50 chr2 38475192 38475677 -214780906 - MER82 DNA MER2_type -181 472 1 631 235 109 65 chr2 38475697 38475812 -214780771 + L1MEc LINE L1 1941 2050 -4346 1019 225 28 0 chr2 38475812 38476030 -214780553 - MER58A DNA MER1_type 0 224 1 631 235 109 65 chr2 38476030 38476374 -214780209 + L1MEc LINE L1 2050 2420 -3976 443 197 0 0 chr2 38476422 38476498 -214780085 + Tigger5 DNA MER2_type 2 77 -2246 385 176 95 0 chr2 38476557 38476631 -214779952 + Tigger5 DNA MER2_type 2243 2323 0 894 218 32 11 chr2 38476658 38476938 -214779645 + L1MEc LINE L1 2468 2753 -3462 385 170 32 0 chr2 38477248 38477342 -214779241 + L1MA8 LINE L1 6191 6287 -4 27 73 0 0 chr2 38477449 38477504 -214779079 + AT_rich Low_complexity Low_complexity 1 55 0 1968 121 0 26 chr2 38478429 38478734 -214777849 - AluSx SINE Alu -15 297 1 586 178 0 0 chr2 38480507 38480597 -214775986 - 5S rRNA rRNA -31 90 1 374 368 8 8 chr2 38481092 38481217 -214775366 - MIR SINE MIR -67 141 17 227 383 11 11 chr2 38481421 38481515 -214775068 + L3 LINE CR1 35 128 -1449 186 265 15 29 chr2 38481619 38481687 -214774896 + L3 LINE CR1 262 328 -1249 587 239 175 1 chr2 38481739 38481928 -214774655 - MIR SINE MIR 0 262 39 386 331 277 29 chr2 38482022 38482617 -214773966 + L3 LINE CR1 577 1319 -258 229 325 67 42 chr2 38482620 38482740 -214773843 + MIR SINE MIR 137 259 -3 481 291 126 30 chr2 38482761 38482991 -214773592 - MIR SINE MIR -6 256 5 212 250 0 0 chr2 38483000 38483040 -214773543 + L3 LINE CR1 1400 1439 -138 2334 104 0 0 chr2 38483133 38483441 -214773142 - AluSx SINE Alu -4 308 1 224 263 13 66 chr2 38484060 38484136 -214772447 - MIR3 SINE MIR -47 161 90 549 326 63 78 chr2 38484255 38484586 -214771997 - L2 LINE L2 -5 3267 2942 48 32 0 0 chr2 38487530 38487592 -214768991 + GC_rich Low_complexity Low_complexity 1 62 0 1730 161 20 16 chr2 38488476 38488780 -214767803 - AluJo SINE Alu -7 305 1 420 127 0 0 chr2 38489900 38489963 -214766620 - AluS SINE Alu -246 63 1 241 293 147 0 chr2 38490297 38490372 -214766211 + L2 LINE L2 2555 2640 -674 230 0 0 32 chr2 38490572 38490603 -214765980 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 879 125 0 0 chr2 38490603 38490723 -214765860 - AluSq/x SINE Alu -192 120 1 202 333 96 30 chr2 38491089 38491224 -214765359 + L2 LINE L2 2387 2530 -784 1708 122 43 79 chr2 38491410 38491714 -214764869 + AluSx SINE Alu 1 293 -19 2401 77 0 3 chr2 38491963 38492275 -214764308 + AluSq SINE Alu 1 311 -2 1101 151 6 0 chr2 38492276 38492455 -214764128 + AluSg/x SINE Alu 133 312 0 1911 121 0 50 chr2 38492563 38492901 -214763682 + AluSx SINE Alu 1 323 0 336 309 139 0 chr2 38492983 38493132 -214763451 + MIR SINE MIR 16 181 -59 231 36 0 0 chr2 38493132 38493160 -214763423 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 697 284 28 19 chr2 38493187 38493402 -214763181 + MIR SINE MIR 44 260 -2 214 301 27 0 chr2 38493962 38494035 -214762548 - L2 LINE L2 0 3313 3239 38 0 0 0 chr2 38494444 38494482 -214762101 + AT_rich Low_complexity Low_complexity 1 38 0 805 125 0 0 chr2 38494482 38494586 -214761997 - U6 snRNA snRNA -3 104 1 707 140 59 15 chr2 38494586 38494722 -214761861 - L1MB7 LINE L1 -42 6142 6001 286 241 62 62 chr2 38494772 38494884 -214761699 - LTR16C LTR ERVL -379 112 1 450 370 65 12 chr2 38494941 38495263 -214761320 + L2 LINE L2 2309 2647 -667 194 340 42 35 chr2 38495766 38495910 -214760673 - L2 LINE L2 -1374 1940 1796 4598 149 29 9 chr2 38496029 38496802 -214759781 + L1MB3 LINE L1 5395 6182 -1 2417 81 7 0 chr2 38497473 38497770 -214758813 + AluSp SINE Alu 1 299 -14 2131 131 0 3 chr2 38497815 38498112 -214758471 - AluSx SINE Alu -16 296 1 266 284 40 14 chr2 38499677 38499751 -214756832 + MIR SINE MIR 82 157 -105 1760 149 0 84 chr2 38499929 38500251 -214756332 + AluSx SINE Alu 1 295 -17 3681 114 20 2 chr2 38500513 38501011 -214755572 - MER84 LTR ERV1 0 507 1 908 215 0 23 chr2 38501769 38501941 -214754642 + MER5B DNA MER1_type 1 168 -10 4593 197 50 28 chr2 38501998 38502978 -214753605 - Charlie1a DNA MER1_type -1307 1454 446 1860 152 7 3 chr2 38502978 38503268 -214753315 - AluSx SINE Alu -17 295 5 4593 197 50 28 chr2 38503268 38503391 -214753192 - Charlie1a DNA MER1_type -2315 446 327 1964 133 111 11 chr2 38503463 38503487 -214753096 + L1PB4 LINE L1 5753 5773 -383 438 20 0 0 chr2 38503487 38503538 -214753045 + (CA)n Simple_repeat Simple_repeat 1 51 0 1964 133 111 11 chr2 38503538 38503874 -214752709 + L1PB4 LINE L1 5773 6149 -7 516 286 57 10 chr2 38503869 38504061 -214752522 + L1MEc LINE L1 111 311 -6085 * 948 144 16 199 chr2 38504135 38504259 -214752324 - Charlie1a DNA MER1_type -2449 312 167 2153 134 3 0 chr2 38504259 38504564 -214752019 + AluSq SINE Alu 1 306 -7 948 144 16 199 chr2 38504564 38504807 -214751776 - Charlie1a DNA MER1_type -2594 167 1 904 237 28 28 chr2 38505541 38505794 -214750789 + LTR16A LTR ERVL 196 448 -2 208 211 0 0 chr2 38506921 38506966 -214749617 + MIR SINE MIR 115 160 -48 2496 56 0 3 chr2 38508263 38508568 -214748015 + AluY SINE Alu 1 304 -7 310 42 42 0 chr2 38509854 38509902 -214746681 + (TA)n Simple_repeat Simple_repeat 1 50 0 320 141 56 14 chr2 38509903 38509974 -214746609 - L1MCa LINE L1 -4358 2068 1995 294 188 43 14 chr2 38509978 38510047 -214746536 - MIR SINE MIR -70 192 122 639 217 13 13 chr2 38510605 38510762 -214745821 - L1ME4a LINE L1 -4 6117 5961 234 0 0 0 chr2 38510773 38510799 -214745784 + (TG)n Simple_repeat Simple_repeat 2 27 0 205 311 33 16 chr2 38510977 38511038 -214745545 - MIR SINE MIR -177 85 24 364 279 19 62 chr2 38512627 38512788 -214743795 - L2 LINE L2 -1 3312 3159 * 372 310 71 10 chr2 38512786 38512983 -214743600 - L2 LINE L2 -237 3035 2827 433 338 29 20 chr2 38513288 38513492 -214743091 + MIR3 SINE MIR 3 208 0 548 260 123 53 chr2 38513512 38513739 -214742844 - MIR SINE MIR 0 262 20 21 0 0 0 chr2 38514179 38514200 -214742383 + AT_rich Low_complexity Low_complexity 1 21 0 2407 101 0 0 chr2 38514309 38514615 -214741968 + AluSp SINE Alu 1 306 -7 861 129 8 8 chr2 38514621 38514753 -214741830 + AluJb SINE Alu 165 296 -16 735 104 37 0 chr2 38514766 38514901 -214741682 - Charlie5 DNA MER1_type -59 2553 2414 1694 141 22 51 chr2 38515028 38515341 -214741242 - AluJo SINE Alu -8 304 1 593 208 104 47 chr2 38516104 38516316 -214740267 + MER112 DNA MER1_type 1 224 -36 2192 65 0 7 chr2 38516596 38516873 -214739710 - AluSc SINE Alu -34 275 1 441 318 57 11 chr2 38517063 38517267 -214739316 - MIR SINE MIR 0 262 50 22 0 0 0 chr2 38518469 38518491 -214738092 + AT_rich Low_complexity Low_complexity 1 22 0 340 250 8 31 chr2 38518945 38519073 -214737510 + CT-rich Low_complexity Low_complexity 1 125 0 2283 104 0 3 chr2 38519435 38519732 -214736851 + AluSc SINE Alu 1 296 -13 183 314 0 0 chr2 38520190 38520241 -214736342 - L2 LINE L2 -17 3255 3205 1577 168 0 87 chr2 38520842 38521189 -214735394 + AluJb SINE Alu 3 312 0 268 310 10 0 chr2 38521820 38521920 -214734663 + L1MC4a LINE L1 5829 5929 -1879 463 228 64 142 chr2 38524086 38524522 -214732061 + MLT1H LTR MaLR 50 567 0 1420 325 72 29 chr2 38525362 38526050 -214730533 + HAL1 LINE L1 155 896 -1611 2012 120 0 66 chr2 38526050 38526384 -214730199 + AluJo SINE Alu 1 312 0 1420 325 72 29 chr2 38526384 38526637 -214729946 + HAL1 LINE L1 896 1137 -1370 1429 265 46 24 chr2 38526708 38527165 -214729418 + HAL1 LINE L1 1464 1930 -577 3615 215 164 85 chr2 38527264 38527624 -214728959 - L2 LINE L2 -751 2563 2233 221 29 0 57 chr2 38527624 38527659 -214728924 + (TATAA)n Simple_repeat Simple_repeat 1 33 0 3615 215 164 85 chr2 38527659 38527670 -214728913 - L2 LINE L2 -1081 2233 2224 278 120 0 60 chr2 38527670 38527711 -214728872 + FLAM SINE Alu 81 120 -182 198 0 0 0 chr2 38527711 38527733 -214728850 + (TTA)n Simple_repeat Simple_repeat 2 23 0 3615 215 164 85 chr2 38527741 38527772 -214728811 - L2 LINE L2 -1090 2224 2197 275 51 51 17 chr2 38527772 38527831 -214728752 + (CA)n Simple_repeat Simple_repeat 2 62 0 3615 215 164 85 chr2 38527831 38528967 -214727616 - L2 LINE L2 -1117 2197 849 948 227 252 0 chr2 38529293 38529610 -214726973 - LTR16A LTR ERVL 0 450 54 1944 149 17 0 chr2 38530304 38530600 -214725983 + AluJo SINE Alu 6 306 -6 294 321 0 12 chr2 38531822 38531906 -214724677 - MIR3 SINE MIR -15 193 111 22 56 0 19 chr2 38532552 38532579 -214724004 + AT_rich Low_complexity Low_complexity 1 27 -26 1426 148 30 112 chr2 38532579 38532910 -214723673 + AluYb8 SINE Alu 1 304 -14 22 56 0 19 chr2 38532910 38532936 -214723647 + AT_rich Low_complexity Low_complexity 27 53 0 183 129 0 0 chr2 38533406 38533437 -214723146 + (CAGGC)n Simple_repeat Simple_repeat 2 32 0 240 35 0 0 chr2 38533521 38533550 -214723033 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 644 58 23 0 chr2 38534082 38534168 -214722415 + AluSg/x SINE Alu 219 306 -3 1187 144 44 0 chr2 38534406 38534587 -214721996 - MER5A DNA MER1_type 0 189 1 270 56 0 0 chr2 38535186 38535222 -214721361 + (TG)n Simple_repeat Simple_repeat 1 36 0 1704 163 3 48 chr2 38536235 38536548 -214720035 - AluJb SINE Alu -13 299 1 270 191 36 12 chr2 38537133 38537217 -214719366 + (TA)n Simple_repeat Simple_repeat 1 86 0 690 296 76 9 chr2 38537347 38537570 -214719013 - MIR SINE MIR -2 260 23 207 0 0 0 chr2 38539816 38539839 -214716744 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 330 26 0 0 chr2 38540675 38540714 -214715869 + (TG)n Simple_repeat Simple_repeat 1 39 0 284 240 190 0 chr2 38540749 38540849 -214715734 + MER20B DNA MER1_type 67 185 -598 808 299 51 16 chr2 38540930 38541398 -214715185 - MLT1K LTR MaLR 0 588 67 2282 120 0 3 chr2 38541504 38541813 -214714770 - AluSx SINE Alu -4 308 1 1912 170 3 0 chr2 38541977 38542277 -214714306 + AluJo SINE Alu 1 301 -11 738 167 68 0 chr2 38542988 38543120 -214713463 + MER30 DNA MER1_type 1 141 -89 986 157 0 41 chr2 38543137 38543309 -214713274 - AluSx SINE Alu -23 287 123 279 0 0 0 chr2 38543318 38543349 -214713234 + (TG)n Simple_repeat Simple_repeat 2 32 0 312 339 24 0 chr2 38543455 38543579 -214713004 + L1ME LINE L1 43 169 -5901 2905 64 111 7 chr2 38543727 38544133 -214712450 - LTR7 LTR ERV1 -2 448 1 2243 103 73 14 chr2 38544133 38544501 -214712082 - HERVH LTR ERV1 0 7713 7324 1193 124 89 0 chr2 38544501 38544703 -214711880 - HERVH LTR ERV1 -1894 5819 5600 3723 125 6 0 chr2 38544704 38545233 -214711350 - HERVH LTR ERV1 -2564 5149 4618 * 5847 90 4 2 chr2 38545231 38546043 -214710540 - HERVH LTR ERV1 -3761 3952 3140 * 14775 91 21 20 chr2 38546040 38548229 -214708354 - HERVH LTR ERV1 -4729 2984 793 380 77 31 31 chr2 38548249 38548314 -214708269 - LTR7 LTR ERV1 -40 410 346 1004 134 0 0 chr2 38548315 38548449 -214708134 - AluSx SINE Alu -179 134 1 674 134 0 0 chr2 38548449 38548546 -214708037 + MER30 DNA MER1_type 134 230 0 1677 278 175 22 chr2 38548957 38549528 -214707055 + L2 LINE L2 2013 2495 -818 2126 123 7 0 chr2 38549528 38549821 -214706762 + AluSx SINE Alu 1 295 -17 1677 278 175 22 chr2 38549821 38550197 -214706386 + L2 LINE L2 2495 3111 -202 574 237 26 46 chr2 38550748 38550900 -214705683 + L2 LINE L2 3160 3308 -5 680 307 68 51 chr2 38551066 38551307 -214705276 + L2 LINE L2 2596 2831 -482 2258 104 0 19 chr2 38551307 38551616 -214704967 - AluSx SINE Alu -9 303 1 680 307 68 51 chr2 38551616 38552072 -214704511 + L2 LINE L2 2831 3313 0 247 229 33 0 chr2 38552106 38552167 -214704416 + L2 LINE L2 3008 3070 -243 278 339 55 16 chr2 38552368 38552495 -214704088 - MIR SINE MIR -128 134 3 3020 275 67 27 chr2 38554239 38554603 -214701980 + L2 LINE L2 2041 2389 -924 2061 137 0 0 chr2 38554603 38554896 -214701687 - AluSx SINE Alu -19 293 1 3020 275 67 27 chr2 38554896 38555607 -214700976 + L2 LINE L2 2389 3161 -152 1703 152 61 0 chr2 38555607 38555724 -214700859 + AluJo SINE Alu 3 111 -201 249 0 73 0 chr2 38555724 38555765 -214700818 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 1703 152 61 0 chr2 38555765 38555911 -214700672 + AluJo SINE Alu 111 282 -30 3020 275 67 27 chr2 38555911 38555994 -214700589 + L2 LINE L2 3161 3239 -74 238 246 66 0 chr2 38556837 38556898 -214699685 - MER94 DNA DNA -61 73 9 293 307 10 10 chr2 38557276 38557377 -214699206 + MIR3 SINE MIR 96 196 -12 544 281 109 17 chr2 38557380 38557618 -214698965 + MIR SINE MIR 2 261 -1 334 308 0 19 chr2 38557693 38557800 -214698783 - MIR SINE MIR -98 164 60 709 265 26 19 chr2 38558418 38558686 -214697897 - L1ME4a LINE L1 -206 5915 5646 432 0 0 0 chr2 38559079 38559127 -214697456 + (CA)n Simple_repeat Simple_repeat 2 49 0 260 335 133 25 chr2 38559185 38559343 -214697240 - MIR SINE MIR -82 180 6 305 297 8 78 chr2 38559345 38559365 -214697218 + MER5A DNA MER1_type 56 76 -113 2048 128 7 10 chr2 38559365 38559670 -214696913 + AluJb SINE Alu 1 304 -8 305 297 8 78 chr2 38559670 38559777 -214696806 + MER5A DNA MER1_type 76 174 -15 639 286 41 25 chr2 38560058 38560303 -214696280 + MIR SINE MIR 2 250 -12 6034 199 31 45 chr2 38560391 38560653 -214695930 - L1MB8 LINE L1 -6 6172 5908 2636 48 3 0 chr2 38560653 38560963 -214695620 + AluY SINE Alu 1 311 0 6034 199 31 45 chr2 38560963 38561237 -214695346 - L1MB8 LINE L1 -270 5908 5632 2550 71 0 0 chr2 38561237 38561546 -214695037 - AluSc SINE Alu 0 309 1 6034 199 31 45 chr2 38561546 38563334 -214693249 - L1MB8 LINE L1 -546 5632 3876 1613 188 111 2 chr2 38563346 38563751 -214692832 - Charlie2a DNA MER1_type -919 1943 1495 1729 219 74 31 chr2 38564910 38565189 -214691394 + LTR37B LTR ERV1 1 308 -160 1973 118 0 7 chr2 38565189 38565468 -214691115 - AluSx SINE Alu -3 309 33 1729 219 74 31 chr2 38565468 38565635 -214690948 + LTR37B LTR ERV1 308 466 -2 488 289 133 14 chr2 38565637 38565931 -214690652 - L1MB8 LINE L1 -3343 2803 2475 403 329 0 17 chr2 38565927 38566164 -214690419 - L1MEc LINE L1 -3998 2312 2080 * 357 239 69 118 chr2 38566514 38566919 -214689664 - L1MEc LINE L1 -4755 1555 1171 1825 162 13 7 chr2 38566925 38567228 -214689355 - AluSx SINE Alu -5 307 3 490 255 176 20 chr2 38567275 38567428 -214689155 + MER5A DNA MER1_type 13 189 0 1279 297 68 65 chr2 38567429 38567763 -214688820 - L1MEc LINE L1 -5003 1116 784 1765 151 41 7 chr2 38567763 38568034 -214688549 - AluJb SINE Alu -22 290 11 1279 297 68 65 chr2 38568034 38568809 -214687774 - L1MEc LINE L1 -5335 784 4 270 273 91 10 chr2 38569281 38569380 -214687203 + MIR SINE MIR 3 109 -153 2388 80 0 0 chr2 38569701 38570002 -214686581 - AluSc SINE Alu -8 301 1 713 24 0 0 chr2 38570228 38570310 -214686273 - L1PA4 LINE L1 -3 6152 6071 273 221 250 0 chr2 38570594 38570730 -214685853 + Charlie7 DNA MER1_type 2443 2612 0 3929 147 57 9 chr2 38570769 38571403 -214685180 + L1PB3 LINE L1 5489 6152 -2 1856 197 83 12 chr2 38572056 38572488 -214684095 - MLT1C LTR MaLR 0 467 5 23 0 0 0 chr2 38573014 38573037 -214683546 + AT_rich Low_complexity Low_complexity 1 23 0 2128 123 7 0 chr2 38573653 38573955 -214682628 + AluSx SINE Alu 1 304 -8 744 173 15 0 chr2 38575506 38575639 -214680944 + L1PA16 LINE L1 6016 6150 -16 225 0 0 0 chr2 38575646 38575671 -214680912 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 499 285 41 0 chr2 38575927 38576099 -214680484 - L1ME4a LINE L1 -193 5928 5750 410 317 83 19 chr2 38576315 38576520 -214680063 - MIR SINE MIR -10 252 35 1969 157 13 0 chr2 38576819 38577118 -214679465 + AluSx SINE Alu 1 303 -9 616 282 16 55 chr2 38577634 38577889 -214678694 - MIR SINE MIR -3 259 15 185 222 44 78 chr2 38577910 38578000 -214678583 - MIR SINE MIR -110 152 66 2406 155 3 0 chr2 38578971 38579307 -214677276 + MER1B DNA MER1_type 1 337 0 201 196 0 0 chr2 38579361 38579407 -214677176 + T-rich Low_complexity Low_complexity 1 46 0 333 87 0 0 chr2 38579524 38579570 -214677013 - MADE1 DNA Mariner -34 46 1 1593 195 24 0 chr2 38581358 38581478 -214675105 + AluJo SINE Alu 1 117 -195 322 38 19 19 chr2 38581478 38581531 -214675052 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1593 195 24 0 chr2 38581531 38581697 -214674886 + AluJo SINE Alu 117 294 -18 1176 181 31 4 chr2 38581898 38582125 -214674458 + L1MC2 LINE L1 6112 6344 0 705 231 18 123 chr2 38582475 38582601 -214673982 - MIR SINE MIR -2 260 177 8083 29 0 0 chr2 38582601 38583877 -214672706 - L1PA4 LINE L1 0 6155 4882 705 231 18 123 chr2 38583877 38584027 -214672556 - MIR SINE MIR -85 177 13 258 333 49 0 chr2 38584436 38584517 -214672066 - L2 LINE L2 -19 3253 3169 1644 138 98 64 chr2 38584662 38584988 -214671595 + MER1B DNA MER1_type 1 337 0 1022 166 6 22 chr2 38585195 38585376 -214671207 + FRAM SINE Alu 1 169 -7 295 250 50 12 chr2 38585945 38586025 -214670558 - L2 LINE L2 -1 3312 3230 1664 152 91 14 chr2 38586036 38586415 -214670168 - LOR1b LTR ERV1 0 461 1 193 230 69 11 chr2 38586484 38586571 -214670012 - L2 LINE L2 -137 3176 3085 1207 248 95 24 chr2 38586595 38586974 -214669609 - L2 LINE L2 -343 2971 2566 4512 133 16 4 chr2 38586992 38587684 -214668899 - MER50 LTR ERV1 -34 700 1 1452 207 98 19 chr2 38587684 38587709 -214668874 - L2 LINE L2 -745 2569 2547 1980 95 50 21 chr2 38587709 38587992 -214668591 + AluSg SINE Alu 1 291 -19 1452 207 98 19 chr2 38587992 38588376 -214668207 - L2 LINE L2 -767 2547 2128 273 235 59 24 chr2 38588499 38588584 -214667999 - MIR3 SINE MIR -12 196 109 221 57 29 0 chr2 38588632 38588667 -214667916 + (TG)n Simple_repeat Simple_repeat 2 37 0 318 262 68 10 chr2 38589247 38589350 -214667233 - MIR SINE MIR -56 206 98 486 288 201 0 chr2 38589438 38589622 -214666961 + MIR SINE MIR 6 226 -36 2996 151 35 40 chr2 38589955 38590532 -214666051 + MER4B LTR ERV1 1 574 -36 1852 122 11 8 chr2 38590875 38591138 -214665445 - AluSx SINE Alu -17 295 32 648 265 150 26 chr2 38591178 38591412 -214665171 + LTR29 LTR ERV1 130 392 -252 601 219 39 5 chr2 38591410 38591622 -214664961 + MER39 LTR ERV1 572 707 0 * 14096 158 24 8 chr2 38591784 38592935 -214663648 - L1PB1 LINE L1 -1 6866 5735 2015 124 7 20 chr2 38592935 38593263 -214663320 - AluSq SINE Alu 0 313 1 14096 158 24 8 chr2 38593263 38597493 -214659090 - L1PB1 LINE L1 -1132 5735 1392 743 221 11 0 chr2 38597490 38597680 -214658903 - L1PB1 LINE L1 -6666 197 6 * 48 0 0 0 chr2 38598175 38598223 -214658360 + AT_rich Low_complexity Low_complexity 1 48 0 550 140 43 0 chr2 38598223 38598316 -214658267 - U6 snRNA snRNA -4 103 7 1347 179 3 103 chr2 38598503 38598815 -214657768 + AluSp SINE Alu 28 308 -5 462 243 78 24 chr2 38599394 38600559 -214656024 + L1ME1 LINE L1 2149 3465 -2681 1414 152 0 27 chr2 38600571 38600605 -214655978 + AluJb SINE Alu 81 114 -198 2044 139 38 6 chr2 38600605 38600949 -214655634 - THE1A LTR MaLR 0 355 1 1414 152 0 27 chr2 38600949 38601138 -214655445 + AluJb SINE Alu 114 298 -14 1656 217 76 31 chr2 38601138 38601821 -214654762 + L1ME1 LINE L1 4628 5341 -805 1930 221 62 22 chr2 38601838 38602416 -214654167 + L1ME1 LINE L1 5560 6160 -6 21 0 0 0 chr2 38602481 38602502 -214654081 + AT_rich Low_complexity Low_complexity 1 21 0 26 23 0 23 chr2 38602848 38602876 -214653707 + AT_rich Low_complexity Low_complexity 1 29 -14 4576 38 6 0 chr2 38602876 38603426 -214653157 - L1PA5 LINE L1 -1 6153 5601 26 23 0 23 chr2 38603426 38603441 -214653142 + AT_rich Low_complexity Low_complexity 29 43 0 354 80 0 0 chr2 38603477 38603527 -214653056 + (TG)n Simple_repeat Simple_repeat 1 50 0 28 48 0 0 chr2 38603707 38603749 -214652834 + AT_rich Low_complexity Low_complexity 1 42 0 678 258 69 127 chr2 38603801 38604158 -214652425 + MER21B LTR ERV1 23 324 -539 1896 183 3 0 chr2 38604158 38604464 -214652119 - AluSx SINE Alu -5 307 1 678 258 69 127 chr2 38604464 38604784 -214651799 + MER21B LTR ERV1 324 661 -202 242 242 33 0 chr2 38606577 38606668 -214649915 + HAL1 LINE L1 1005 1098 -1409 340 247 51 75 chr2 38606838 38607130 -214649453 + L1ME4a LINE L1 5618 5902 -219 383 345 34 20 chr2 38608194 38608342 -214648241 + MIR SINE MIR 2 151 -111 425 269 187 8 chr2 38608490 38608624 -214647959 + MIR3 SINE MIR 30 187 -21 5421 145 25 11 chr2 38608828 38609809 -214646774 - L1MA4 LINE L1 -11 6289 5296 21 57 0 0 chr2 38609964 38609999 -214646584 + GC_rich Low_complexity Low_complexity 1 35 0 24 103 0 0 chr2 38611025 38611112 -214645471 + AT_rich Low_complexity Low_complexity 1 87 0 247 266 64 58 chr2 38611142 38611315 -214645268 - L1ME4a LINE L1 -102 6019 5846 471 216 69 0 chr2 38611934 38612050 -214644533 + MER103 DNA DNA 2 125 -41 180 0 0 0 chr2 38612681 38612701 -214643882 + (A)n Simple_repeat Simple_repeat 1 20 0 1340 205 79 4 chr2 38613160 38613438 -214643145 - AluJo SINE Alu -1 301 3 322 300 23 31 chr2 38613442 38613572 -214643011 - MIR SINE MIR -73 189 61 2151 217 84 11 chr2 38613789 38614251 -214642332 - MER89 LTR ERV1 0 559 53 2062 102 3 3 chr2 38614251 38614535 -214642048 - AluSg1 SINE Alu -25 284 1 2151 217 84 11 chr2 38614535 38614593 -214641990 - MER89 LTR ERV1 -506 53 1 811 162 0 22 chr2 38614823 38614959 -214641624 - FLAM_A SINE Alu 0 133 1 1088 144 21 26 chr2 38615406 38615600 -214640983 + AluJo SINE Alu 109 301 -11 2089 104 0 57 chr2 38616108 38616425 -214640158 - AluSx SINE Alu -13 299 1 24 0 0 0 chr2 38616432 38616456 -214640127 + AT_rich Low_complexity Low_complexity 1 24 0 375 267 151 48 chr2 38616545 38616786 -214639797 + L1ME4a LINE L1 5592 5887 -234 1732 51 0 0 chr2 38616786 38617001 -214639582 - L1PA3 LINE L1 -1 6154 5940 375 267 151 48 chr2 38617001 38617137 -214639446 + L1ME4a LINE L1 5887 6008 -113 214 229 14 14 chr2 38617320 38617390 -214639193 + (TA)n Simple_repeat Simple_repeat 2 71 0 475 316 37 88 chr2 38617887 38618181 -214638402 - L2 LINE L2 -5 3267 2989 255 270 160 0 chr2 38618352 38618452 -214638131 - MIR SINE MIR -59 203 88 1154 258 21 45 chr2 38618455 38618835 -214637748 - MLT1A2 LTR MaLR 0 374 4 381 58 0 0 chr2 38618876 38618928 -214637655 + (TG)n Simple_repeat Simple_repeat 2 53 0 659 268 49 12 chr2 38619478 38619642 -214636941 - MER5B DNA MER1_type -2 176 7 258 277 15 0 chr2 38619922 38619987 -214636596 - L2 LINE L2 0 3313 3248 488 278 23 15 chr2 38620602 38620735 -214635848 + MIR SINE MIR 20 153 -109 487 235 93 37 chr2 38621084 38621116 -214635467 - MIR SINE MIR -43 219 190 1780 136 4 8 chr2 38621116 38621374 -214635209 - AluJb SINE Alu -23 289 33 487 235 93 37 chr2 38621374 38621503 -214635080 - MIR SINE MIR -72 190 49 453 50 0 0 chr2 38623209 38623269 -214633314 + (TG)n Simple_repeat Simple_repeat 1 60 0 652 239 111 114 chr2 38624143 38624461 -214632122 - MLT1G LTR MaLR -285 310 1 4342 225 81 20 chr2 38624624 38626865 -214629718 - L1ME2 LINE L1 -9 6224 3844 325 245 214 47 chr2 38626882 38627074 -214629509 - MLT1F LTR MaLR -130 412 189 221 203 34 0 chr2 38627087 38627146 -214629437 + GA-rich Low_complexity Low_complexity 2 62 0 2272 255 42 33 chr2 38627146 38629119 -214627464 - L1ME2 LINE L1 -2968 3247 1298 1476 281 83 56 chr2 38629122 38629984 -214626599 - L1ME2 LINE L1 -5253 1143 245 2091 151 0 0 chr2 38629984 38630275 -214626308 - AluSx SINE Alu -21 291 1 1476 281 83 56 chr2 38630275 38630472 -214626111 - L1ME2 LINE L1 -6151 245 55 274 171 29 0 chr2 38631305 38631375 -214625208 + (TCTA)n Simple_repeat Simple_repeat 1 72 0 319 286 86 29 chr2 38631455 38631595 -214624988 + MIR SINE MIR 115 262 0 248 70 23 0 chr2 38631755 38631798 -214624785 + (CCCTG)n Simple_repeat Simple_repeat 2 45 0 3100 83 4 20 chr2 38632126 38632583 -214624000 + L1PB1 LINE L1 5701 6150 -1 418 245 46 46 chr2 38632709 38632860 -214623723 + LTR50 LTR ERVL 17 167 -628 688 301 85 22 chr2 38632921 38633240 -214623343 + LTR50 LTR ERVL 344 682 -113 1356 161 8 39 chr2 38633264 38633519 -214623064 + Tigger7 DNA MER2_type 1 247 -486 548 174 10 0 chr2 38633527 38633625 -214622958 + Tigger7 DNA MER2_type 2389 2487 0 941 103 0 7 chr2 38633665 38633810 -214622773 + (TTCCC)n Simple_repeat Simple_repeat 3 146 0 477 300 51 27 chr2 38634672 38634965 -214621618 + ERVL LTR ERVL 972 1271 -4493 356 243 19 35 chr2 38634991 38635148 -214621435 + MER58 DNA MER1_type 60 2420 0 364 237 67 59 chr2 38636494 38636629 -214619954 + L3 LINE CR1 767 902 -675 243 352 29 0 chr2 38637219 38637324 -214619259 - MIR SINE MIR -60 148 41 410 231 0 9 chr2 38638764 38638872 -214617711 - MER103 DNA DNA -58 108 2 206 358 100 42 chr2 38641378 38641568 -214615015 + L2 LINE L2 2558 2758 -556 1598 180 29 0 chr2 38641658 38641967 -214614616 - AluSx SINE Alu 0 317 1 453 281 122 13 chr2 38642067 38642253 -214614330 + L1ME4a LINE L1 5649 5868 -253 6810 124 58 17 chr2 38642253 38642840 -214613743 - Tigger3b DNA MER2_type -1797 1231 669 1802 157 3 38 chr2 38642840 38643158 -214613425 - AluJo SINE Alu -5 307 1 6810 124 58 17 chr2 38643158 38643752 -214612831 - Tigger3b DNA MER2_type -2359 669 2 453 281 122 13 chr2 38643752 38643803 -214612780 + L1ME4a LINE L1 5868 5912 -209 7448 181 28 22 chr2 38643806 38645360 -214611223 + MER52A LTR ERV1 245 1755 0 295 215 8 85 chr2 38645419 38645549 -214611034 + L1ME4a LINE L1 5999 6118 -3 234 213 39 118 chr2 38645582 38645709 -214610874 - L1ME4a LINE L1 -5 6116 6000 294 270 70 104 chr2 38645721 38646076 -214610507 - MLT1I LTR MaLR -26 383 41 1760 154 17 10 chr2 38646204 38646496 -214610087 - AluJb SINE Alu -18 294 1 661 234 77 55 chr2 38646592 38646785 -214609798 - L1ME4a LINE L1 -313 5808 5606 1662 150 54 18 chr2 38646785 38647065 -214609518 - AluJb SINE Alu -22 290 1 661 234 77 55 chr2 38647065 38647144 -214609439 - L1ME4a LINE L1 -515 5606 5530 187 244 141 26 chr2 38647272 38647350 -214609233 + L2 LINE L2 3166 3252 -61 505 136 7 57 chr2 38647877 38648017 -214608566 + (TTCTCC)n Simple_repeat Simple_repeat 3 135 0 404 289 17 33 chr2 38648025 38648205 -214608378 + Charlie8 DNA MER1_type 97 273 -2144 468 250 54 0 chr2 38648592 38648704 -214607879 - L2 LINE L2 -8 3305 3188 2984 246 142 35 chr2 38648718 38649826 -214606757 + L2 LINE L2 1936 3170 -143 1455 227 7 3 chr2 38649826 38650121 -214606462 - AluJo SINE Alu -16 296 1 2984 246 142 35 chr2 38650121 38650221 -214606362 + L2 LINE L2 3170 3258 -55 198 103 0 0 chr2 38650245 38650274 -214606309 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2189 70 42 7 chr2 38650611 38650897 -214605686 + AluSc SINE Alu 1 296 -13 253 332 63 22 chr2 38652444 38652627 -214603956 + MIR SINE MIR 20 212 -50 1357 122 5 0 chr2 38652851 38653048 -214603535 - AluSq SINE Alu -1 312 115 1029 88 22 7 chr2 38653105 38653242 -214603341 - AluSq SINE Alu -174 139 1 332 309 80 11 chr2 38653283 38653529 -214603054 - L1ME3A LINE L1 -214 5939 5669 270 291 187 3 chr2 38653530 38653846 -214602737 - L1ME3A LINE L1 -2171 5620 5247 301 293 107 94 chr2 38653861 38654254 -214602329 - L1ME3A LINE L1 -884 5245 4848 21 0 0 0 chr2 38654265 38654286 -214602297 + AT_rich Low_complexity Low_complexity 1 21 0 8476 184 27 20 chr2 38654384 38656474 -214600109 - L1PA13 LINE L1 -11 6152 4045 7941 11 0 0 chr2 38656474 38657771 -214598812 - L1PA2 LINE L1 0 6155 4859 8476 184 27 20 chr2 38657771 38658717 -214597866 - L1PA13 LINE L1 -2118 4045 3107 4383 111 23 6 chr2 38658747 38659447 -214597136 - L1MA2 LINE L1 -100 6204 5493 2052 264 7 5 chr2 38659432 38660042 -214596541 - L1ME3A LINE L1 -3027 3102 2492 * 300 283 91 36 chr2 38660107 38660516 -214596067 - L1M4 LINE L1 -2582 3564 3096 689 193 7 22 chr2 38660516 38660651 -214595932 - FLAM_A SINE Alu 0 133 1 300 283 91 36 chr2 38660651 38660966 -214595617 - L1M4 LINE L1 -3050 3096 2800 414 311 79 16 chr2 38661099 38661289 -214595294 - L1ME3A LINE L1 -5415 704 503 413 350 154 29 chr2 38661399 38661679 -214594904 - L1ME3A LINE L1 -5758 361 47 483 225 247 17 chr2 38663252 38663430 -214593153 + MIR SINE MIR 43 261 -1 1638 129 102 88 chr2 38665969 38666090 -214590493 + MLT2C2 LTR ERVL 1 119 -345 2077 127 0 35 chr2 38666090 38666406 -214590177 + AluSg SINE Alu 1 305 -5 1638 129 102 88 chr2 38666406 38666694 -214589889 + MLT2C2 LTR ERVL 119 416 -48 290 133 0 50 chr2 38666759 38666819 -214589764 + MLT2C2 LTR ERVL 464 520 0 229 284 32 51 chr2 38666867 38666969 -214589614 - L2 LINE L2 -332 2940 2848 331 284 0 10 chr2 38667662 38667764 -214588819 + LTR67 LTR ERVL 437 537 -20 1327 236 24 0 chr2 38718516 38718889 -214537694 + L1ME1 LINE L1 3544 3925 -2221 1280 106 0 0 chr2 38718889 38719050 -214537533 - AluSx SINE Alu -151 161 1 259 247 25 0 chr2 38719051 38719132 -214537451 - L1MD2 LINE L1 -145 6214 6132 * 2781 202 61 38 chr2 38719115 38719546 -214537037 + L1ME1 LINE L1 4441 4861 -1305 2481 60 3 7 chr2 38719546 38719848 -214536735 + AluY SINE Alu 1 301 -10 2781 202 61 38 chr2 38719848 38720901 -214535682 + L1ME1 LINE L1 4861 5962 -204 22 35 0 0 chr2 38720901 38720930 -214535653 + AT_rich Low_complexity Low_complexity 1 29 0 249 190 350 30 chr2 38721687 38721787 -214534796 + L2 LINE L2 3182 3313 0 1120 216 41 25 chr2 38721819 38722138 -214534445 + MLT1C LTR MaLR 144 467 0 2149 109 3 17 chr2 38722812 38723114 -214533469 - AluSx SINE Alu -14 298 1 261 276 23 46 chr2 38723528 38723615 -214532968 + MIR SINE MIR 3 87 -175 200 378 0 31 chr2 38723721 38723819 -214532764 - MIR SINE MIR -148 114 20 349 323 126 19 chr2 38724241 38724504 -214532079 + L2 LINE L2 2109 2399 -915 2063 284 163 14 chr2 38725475 38726400 -214530183 - L2 LINE L2 -234 3079 2004 305 310 92 14 chr2 38726554 38726696 -214529887 - L2 LINE L2 -1341 1973 1821 608 188 60 0 chr2 38726733 38726866 -214529717 - L1PA10 LINE L1 -1 6167 6027 1219 261 160 32 chr2 38726996 38727563 -214529020 + HAL1 LINE L1 220 876 -1631 2219 105 0 31 chr2 38727563 38727886 -214528697 - AluSq SINE Alu 0 313 1 1219 261 160 32 chr2 38727886 38727942 -214528641 + HAL1 LINE L1 876 923 -1584 2814 96 76 5 chr2 38727953 38728399 -214528184 + MER9 LTR ERVK 34 511 0 581 275 18 42 chr2 38728486 38728653 -214527930 - L2 LINE L2 -2047 1267 1105 781 207 130 49 chr2 38730307 38730592 -214525991 + L2 LINE L2 2305 2612 -702 220 321 107 9 chr2 38730775 38730887 -214525696 + MIR SINE MIR 81 203 -59 1928 230 49 28 chr2 38731199 38731728 -214524855 - MLT1F LTR MaLR -2 593 1 2204 122 0 13 chr2 38732019 38732323 -214524260 + AluSx SINE Alu 1 300 -12 243 267 35 0 chr2 38732361 38732447 -214524136 - MLT1K LTR MaLR 0 588 500 303 276 41 16 chr2 38732505 38732628 -214523955 - MLT1K LTR MaLR -186 402 277 407 267 230 7 chr2 38732884 38733019 -214523564 + MER5A DNA MER1_type 24 188 -1 356 312 206 41 chr2 38733381 38733817 -214522766 - L2 LINE L2 -568 2746 2239 1791 155 0 21 chr2 38734012 38734328 -214522255 - AluJo SINE Alu 0 310 1 2373 105 0 0 chr2 38734791 38735104 -214521479 + AluSq SINE Alu 1 313 0 1283 160 0 63 chr2 38736506 38736549 -214520034 + AluJo SINE Alu 37 81 -231 2428 87 3 0 chr2 38736549 38736849 -214519734 + AluSp SINE Alu 1 301 -12 1283 160 0 63 chr2 38736849 38737042 -214519541 + AluJo SINE Alu 81 258 -54 23 0 0 0 chr2 38737046 38737069 -214519514 + AT_rich Low_complexity Low_complexity 1 23 0 607 106 34 28 chr2 38737831 38738010 -214518573 + (TA)n Simple_repeat Simple_repeat 1 180 0 1873 178 0 0 chr2 38738370 38738662 -214517921 + AluJo SINE Alu 1 292 -20 869 160 0 0 chr2 38738719 38738850 -214517733 + FLAM_C SINE Alu 1 131 -12 2288 101 0 0 chr2 38739173 38739461 -214517122 - AluSc SINE Alu -21 288 1 233 216 0 0 chr2 38739630 38739681 -214516902 + GA-rich Low_complexity Low_complexity 1 51 0 1060 204 38 5 chr2 38739727 38739938 -214516645 - MER20 DNA MER1_type -1 218 1 1948 148 13 10 chr2 38740166 38740470 -214516113 + AluSx SINE Alu 1 305 -7 593 313 70 14 chr2 38742608 38742822 -214513761 - L3 LINE CR1 -11 1566 1341 230 246 15 31 chr2 38742829 38742894 -214513689 - L3 LINE CR1 -941 636 573 445 219 163 0 chr2 38743275 38743398 -214513185 - MER5B DNA MER1_type -34 144 2 27 49 0 0 chr2 38743506 38743547 -214513036 + AT_rich Low_complexity Low_complexity 1 41 0 2182 130 0 0 chr2 38743547 38743840 -214512743 + AluSx SINE Alu 1 293 -19 282 56 0 0 chr2 38743841 38743877 -214512706 + (TA)n Simple_repeat Simple_repeat 1 36 0 198 0 0 0 chr2 38743876 38743898 -214512685 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 721 179 15 22 chr2 38744272 38744406 -214512177 + FLAM_A SINE Alu 1 133 0 2585 140 110 10 chr2 38745129 38745649 -214510934 + L1MB8 LINE L1 5607 6178 0 757 175 25 25 chr2 38745779 38745939 -214510644 + MLT1D LTR MaLR 346 505 0 258 319 26 9 chr2 38746473 38746589 -214509994 + L2 LINE L2 2412 2529 -785 471 217 212 29 chr2 38746701 38746954 -214509629 + L1MC4 LINE L1 6959 7256 -728 * 472 243 163 80 chr2 38746947 38747487 -214509096 + L1MC5 LINE L1 7260 7783 -178 1712 177 0 7 chr2 38747487 38747758 -214508825 + AluJo SINE Alu 24 292 -20 472 243 163 80 chr2 38747758 38747894 -214508689 + L1MC5 LINE L1 7783 7906 -55 233 268 14 14 chr2 38748083 38748146 -214508437 + (CATA)n Simple_repeat Simple_repeat 2 64 -75 516 212 326 0 chr2 38748146 38748278 -214508305 + MER45A DNA AcHobo 1 175 -3 233 268 14 14 chr2 38748278 38748350 -214508233 + (CATA)n Simple_repeat Simple_repeat 63 139 0 198 0 0 0 chr2 38748510 38748532 -214508051 + (TG)n Simple_repeat Simple_repeat 1 22 0 2473 85 0 0 chr2 38748697 38749002 -214507581 - AluSq SINE Alu -8 305 1 1552 259 107 63 chr2 38749146 38749363 -214507220 - L1MC4 LINE L1 -12 8030 7824 2021 135 0 3 chr2 38749363 38749688 -214506895 + AluSx SINE Alu 1 324 0 1552 259 107 63 chr2 38749688 38749821 -214506762 - L1MC4 LINE L1 -218 7824 7698 1634 209 0 3 chr2 38749821 38750127 -214506456 - AluJo SINE Alu -7 305 1 1552 259 107 63 chr2 38750127 38750571 -214506012 - L1MC4 LINE L1 -344 7698 7199 2872 114 25 39 chr2 38750720 38751158 -214505425 + MSTB1 LTR MaLR 1 432 0 950 252 122 28 chr2 38751709 38752070 -214504513 - L1ME3 LINE L1 -211 5951 5557 2237 120 7 0 chr2 38752268 38752569 -214504014 + AluSx SINE Alu 1 303 -9 2258 120 0 0 chr2 38753370 38753670 -214502913 + AluSq SINE Alu 1 300 -13 402 270 15 58 chr2 38754031 38754082 -214502501 + L2 LINE L2 3177 3229 -84 2197 113 7 0 chr2 38754082 38754374 -214502209 - AluSx SINE Alu -18 294 1 402 270 15 58 chr2 38754374 38754459 -214502124 + L2 LINE L2 3229 3307 -6 360 284 121 37 chr2 38754922 38755112 -214501471 + MIR SINE MIR 23 228 -34 1841 191 61 27 chr2 38755130 38755574 -214501009 + L1ME2 LINE L1 5696 6154 -10 1840 111 9 79 chr2 38755586 38755902 -214500681 - AluSx SINE Alu -18 294 1 3034 125 42 10 chr2 38756343 38756838 -214499745 + L1MB3 LINE L1 5671 6181 -2 798 124 0 0 chr2 38756896 38757009 -214499574 - AluSp/q SINE Alu -3 310 198 1924 130 7 33 chr2 38757078 38757385 -214499198 + AluJb SINE Alu 1 299 -13 306 0 0 0 chr2 38757385 38757419 -214499164 + (TA)n Simple_repeat Simple_repeat 2 35 0 764 294 56 36 chr2 38757540 38757877 -214498706 + MLT1I LTR MaLR 63 406 -3 626 296 87 47 chr2 38757878 38758249 -214498334 + L1MC4a LINE L1 4489 4891 -1255 1415 130 39 0 chr2 38758249 38758479 -214498104 - L1MB4 LINE L1 -2 6178 5940 626 296 87 47 chr2 38758479 38758630 -214497953 + L1MC4a LINE L1 4891 5034 -1112 2344 101 3 10 chr2 38758721 38759028 -214497555 + AluSq SINE Alu 2 306 -7 346 308 162 20 chr2 38759117 38759364 -214497219 + L1MC4a LINE L1 5262 5543 -2265 1159 153 0 110 chr2 38759581 38759835 -214496748 + AluJo SINE Alu 86 311 -1 480 295 96 48 chr2 38759856 38760127 -214496456 + L1MC4a LINE L1 5770 6053 -1755 2325 75 0 47 chr2 38760548 38760866 -214495717 - AluY SINE Alu -6 305 3 610 285 167 11 chr2 38760911 38761192 -214495391 + L3 LINE CR1 1242 1566 -11 2063 128 0 36 chr2 38761378 38761705 -214494878 - AluSx SINE Alu 0 312 1 946 167 39 0 chr2 38761729 38761885 -214494698 - AluJb SINE Alu -15 297 136 1953 144 3 3 chr2 38762436 38762748 -214493835 + AluSx SINE Alu 1 312 0 1757 177 13 0 chr2 38762762 38763061 -214493522 + AluJb SINE Alu 1 303 -9 1886 142 3 29 chr2 38763532 38763842 -214492741 + AluJb SINE Alu 1 302 -10 31 74 0 21 chr2 38765063 38765107 -214491476 + AT_rich Low_complexity Low_complexity 1 44 -49 2284 96 7 0 chr2 38765107 38765398 -214491185 - AluSx SINE Alu -19 293 1 31 74 0 21 chr2 38765398 38765448 -214491135 + AT_rich Low_complexity Low_complexity 44 93 0 35 24 0 0 chr2 38765680 38765722 -214490861 + AT_rich Low_complexity Low_complexity 1 42 0 2217 34 45 8 chr2 38765774 38766042 -214490541 + AluY SINE Alu 33 310 -1 2036 147 0 3 chr2 38766187 38766486 -214490097 + AluSx SINE Alu 1 298 -14 2587 56 0 0 chr2 38766488 38766792 -214489791 + AluY SINE Alu 1 304 -7 180 0 0 0 chr2 38767124 38767144 -214489439 + (T)n Simple_repeat Simple_repeat 1 20 0 190 282 107 10 chr2 38767857 38767960 -214488623 + MIR SINE MIR 124 236 -26 2343 90 0 7 chr2 38768392 38768693 -214487890 + AluSg SINE Alu 1 299 -11 1766 185 0 3 chr2 38768776 38769074 -214487509 - AluJb SINE Alu -15 297 1 1986 141 7 0 chr2 38769477 38769774 -214486809 - AluJb SINE Alu -13 299 1 2241 87 7 3 chr2 38769779 38770065 -214486518 - AluSc SINE Alu -22 287 1 338 265 20 48 chr2 38770072 38770219 -214486364 - L1ME LINE L1 -299 5822 5680 1629 158 4 4 chr2 38770235 38770494 -214486089 - AluJb SINE Alu -13 299 41 2325 100 6 0 chr2 38770506 38770817 -214485766 - AluSp SINE Alu 0 313 1 917 257 113 70 chr2 38770857 38771344 -214485239 + MLT1H1 LTR MaLR 45 552 -3 444 200 0 22 chr2 38771366 38771456 -214485127 + MIR3 SINE MIR 89 176 -32 2406 106 0 0 chr2 38772183 38772494 -214484089 + AluSq SINE Alu 3 313 0 768 313 90 36 chr2 38772634 38773248 -214483335 + L2 LINE L2 2463 3130 -142 2291 110 3 0 chr2 38773248 38773548 -214483035 - AluSx SINE Alu -11 301 1 768 313 90 36 chr2 38773548 38773685 -214482898 + L2 LINE L2 3130 3258 -14 425 141 16 0 chr2 38774174 38774238 -214482345 + LTR19A LTR ERV1 1 65 -421 46821 79 9 8 chr2 38774239 38775601 -214480982 + HERVFH19I LTR ERV1 1493 2852 -4867 2036 122 3 7 chr2 38775601 38775908 -214480675 - AluSx SINE Alu 0 306 1 46821 79 9 8 chr2 38775908 38777817 -214478766 + HERVFH19I LTR ERV1 2852 4758 -2961 2314 94 7 0 chr2 38777817 38778116 -214478467 + AluSg SINE Alu 1 301 -9 46821 79 9 8 chr2 38778116 38780961 -214475622 + HERVFH19I LTR ERV1 4758 7616 -103 1805 171 0 13 chr2 38781129 38781439 -214475144 - AluJo SINE Alu -6 306 1 528 236 93 28 chr2 38782668 38782884 -214473699 - L1ME LINE L1 -668 5498 5269 756 163 7 15 chr2 38782975 38783110 -214473473 - FLAM_C SINE Alu -4 139 6 2260 88 7 0 chr2 38783337 38783634 -214472949 + AluSg SINE Alu 1 299 -11 23 0 0 0 chr2 38784252 38784275 -214472308 + AT_rich Low_complexity Low_complexity 1 23 0 1669 166 0 53 chr2 38784299 38784541 -214472042 - AluJb SINE Alu -9 303 81 2274 100 3 3 chr2 38784541 38784840 -214471743 + AluSg SINE Alu 1 299 -11 1669 166 0 53 chr2 38784840 38784917 -214471666 - AluJb SINE Alu -231 81 1 271 228 49 54 chr2 38787621 38787639 -214468944 - L1ME LINE L1 -2893 3253 3236 1863 160 0 13 chr2 38787639 38787939 -214468644 - AluJb SINE Alu -16 296 1 271 228 49 54 chr2 38787939 38788104 -214468479 - L1ME LINE L1 -2910 3236 3071 368 316 47 60 chr2 38788287 38788453 -214468130 - HAL1b LINE L1 -875 473 306 2224 94 20 7 chr2 38788453 38788750 -214467833 + AluSg SINE Alu 1 301 -9 368 316 47 60 chr2 38788750 38788947 -214467636 - HAL1b LINE L1 -1042 306 115 1297 128 13 49 chr2 38788949 38789108 -214467475 - MER2 DNA MER2_type 0 345 195 1935 167 0 3 chr2 38789108 38789420 -214467163 + AluJb SINE Alu 1 311 -1 1297 128 13 49 chr2 38789420 38789485 -214467098 - MER2 DNA MER2_type -150 195 129 4677 120 12 140 chr2 38789485 38790083 -214466500 + Tigger3(Golem) DNA MER2_type 2 675 -2354 1941 157 10 3 chr2 38790083 38790388 -214466195 - AluJb SINE Alu -5 307 1 216 0 0 0 chr2 38790388 38790412 -214466171 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 485 114 114 0 chr2 38790412 38790482 -214466101 - AluJb SINE Alu -31 281 204 4677 120 12 140 chr2 38790482 38790648 -214465935 + Tigger3(Golem) DNA MER2_type 673 859 -2170 2371 106 0 0 chr2 38790648 38790949 -214465634 - AluSx SINE Alu -11 301 1 4677 120 12 140 chr2 38790949 38791258 -214465325 + Tigger3(Golem) DNA MER2_type 859 1206 -1823 2288 89 40 3 chr2 38791258 38791560 -214465023 - AluSq SINE Alu 0 313 1 4677 120 12 140 chr2 38791560 38791844 -214464739 + Tigger3(Golem) DNA MER2_type 1206 3029 0 851 174 0 0 chr2 38791844 38791975 -214464608 - MER2 DNA MER2_type -214 131 1 3082 23 12 3 chr2 38792825 38793169 -214463414 - L1PA4 LINE L1 -3 6152 5806 723 97 117 0 chr2 38793555 38793658 -214462925 + AluSq/x SINE Alu 2 116 -197 4746 165 84 60 chr2 38795043 38796100 -214460483 + Tigger6a DNA MER2_type 2 1083 0 3402 155 28 48 chr2 38796473 38797303 -214459280 + L1MB5 LINE L1 5009 5821 -353 2138 54 43 4 chr2 38797303 38797579 -214459004 + AluY SINE Alu 1 287 -24 3402 155 28 48 chr2 38797579 38797726 -214458857 + L1MB5 LINE L1 5821 5969 -205 698 314 147 33 chr2 38797756 38797788 -214458795 + L2 LINE L2 2034 2061 -1253 1820 141 30 27 chr2 38797788 38798087 -214458496 - AluSx SINE Alu -12 300 1 698 314 147 33 chr2 38798087 38798624 -214457959 + L2 LINE L2 2061 2668 -646 879 194 56 18 chr2 38798625 38798844 -214457739 - L1MB4 LINE L1 -6 6174 5973 1294 90 28 6 chr2 38798844 38799022 -214457561 - AluJo SINE Alu -9 303 122 2943 141 28 10 chr2 38799022 38799520 -214457063 - L1MB4 LINE L1 -209 5971 5465 2536 64 6 0 chr2 38799551 38799862 -214456721 + AluSp SINE Alu 1 313 0 927 240 26 131 chr2 38799867 38800072 -214456511 + L2 LINE L2 1835 2060 -1212 2311 88 0 3 chr2 38800072 38800366 -214456217 - AluSq SINE Alu -18 295 3 927 240 26 131 chr2 38800366 38800752 -214455831 + L2 LINE L2 2060 3024 -248 1618 120 0 0 chr2 38801250 38801475 -214455108 + AluSc SINE Alu 84 308 -1 618 309 17 7 chr2 38801479 38801770 -214454813 - L2 LINE L2 -164 3149 2856 261 0 0 0 chr2 38802417 38802446 -214454137 + (CCG)n Simple_repeat Simple_repeat 1 29 0 280 218 138 23 chr2 38802826 38802913 -214453670 - MIR SINE MIR -110 152 56 2230 103 3 7 chr2 38803417 38803718 -214452865 + AluSx SINE Alu 1 300 -12 2066 136 0 0 chr2 38804366 38804652 -214451931 - AluSx SINE Alu -26 286 1 330 293 93 20 chr2 38804654 38804804 -214451779 + MERVL LTR ERVL 513 673 -5091 253 333 70 19 chr2 38804857 38805013 -214451570 + MERVL LTR ERVL 827 990 -4774 2294 82 34 0 chr2 38805075 38805367 -214451216 + AluSc SINE Alu 1 302 -7 432 304 113 0 chr2 38805710 38805914 -214450669 + MERVL LTR ERVL 3947 4173 -1312 647 185 35 15 chr2 38806276 38806443 -214450140 + MLT1A1 LTR MaLR 2 210 -155 2075 121 7 0 chr2 38806443 38806830 -214449753 + AluSx SINE Alu 1 389 0 647 185 35 15 chr2 38806830 38806885 -214449698 + MLT1A1 LTR MaLR 210 262 -103 963 292 58 30 chr2 38806885 38807313 -214449270 + L2 LINE L2 2825 3264 -49 1017 240 0 5 chr2 38807317 38807517 -214449066 + MER58A DNA MER1_type 26 224 0 434 211 84 28 chr2 38807533 38807675 -214448908 - L2 LINE L2 -1204 2110 1961 738 171 17 86 chr2 38807885 38807934 -214448649 - L1MB5 LINE L1 0 6174 6123 2494 76 0 3 chr2 38807934 38808237 -214448346 - AluSq SINE Alu -11 302 1 738 171 17 86 chr2 38808237 38808362 -214448221 - L1MB5 LINE L1 -51 6123 6012 33 56 0 0 chr2 38808412 38808466 -214448117 + AT_rich Low_complexity Low_complexity 1 54 0 387 297 118 9 chr2 38808481 38808710 -214447873 - L1MB5 LINE L1 -345 5817 5564 4018 264 54 55 chr2 38808710 38808859 -214447724 - L1MEc LINE L1 -4418 1978 1830 2015 121 3 34 chr2 38808859 38809156 -214447427 - AluSq SINE Alu -25 288 1 4018 264 54 55 chr2 38809156 38809344 -214447239 - L1MEc LINE L1 -4566 1830 1643 2385 75 0 14 chr2 38809344 38809638 -214446945 - AluY SINE Alu -21 290 1 4018 264 54 55 chr2 38809638 38809814 -214446769 - L1MEc LINE L1 -4753 1643 1468 2872 16 0 0 chr2 38809814 38810125 -214446458 - AluYa5 SINE Alu 0 311 1 4018 264 54 55 chr2 38810125 38811450 -214445133 - L1MEc LINE L1 -4928 1468 140 356 244 12 110 chr2 38811464 38811538 -214445045 - L1MB5 LINE L1 -753 5393 5342 1671 168 14 31 chr2 38811538 38811830 -214444753 - AluJo SINE Alu -22 290 4 356 244 12 110 chr2 38811830 38811919 -214444664 - L1MB5 LINE L1 -804 5342 5246 756 193 6 11 chr2 38811927 38812108 -214444475 + CT-rich Low_complexity Low_complexity 1 180 0 2126 124 10 0 chr2 38812108 38812398 -214444185 - AluSx SINE Alu -19 293 1 2322 110 0 3 chr2 38812481 38812791 -214443792 + AluSx SINE Alu 1 309 -3 234 176 72 24 chr2 38813280 38813405 -214443178 + (TTA)n Simple_repeat Simple_repeat 1 131 0 1715 82 137 4 chr2 38813707 38813962 -214442621 - AluSx SINE Alu -23 289 1 231 320 48 0 chr2 38814374 38814477 -214442106 + L1ME4a LINE L1 5799 5906 -215 261 285 89 0 chr2 38814501 38814624 -214441959 + L1ME4a LINE L1 5961 6094 -27 274 345 109 0 chr2 38814837 38814947 -214441636 + MIR SINE MIR 20 141 -121 2256 105 0 19 chr2 38814985 38815299 -214441284 - AluSg1 SINE Alu -1 308 1 298 252 155 32 chr2 38815530 38815685 -214440898 + MLT1J LTR MaLR 3 176 -335 2241 107 0 3 chr2 38815690 38815981 -214440602 + AluSx SINE Alu 1 290 -22 1435 107 243 8 chr2 38816021 38816264 -214440319 + AluSg SINE Alu 1 300 0 2347 78 0 13 chr2 38816463 38816770 -214439813 + AluSc SINE Alu 1 303 -6 319 241 51 58 chr2 38816775 38816912 -214439671 + MLT1J LTR MaLR 374 509 -2 1383 151 5 14 chr2 38817557 38817776 -214438807 - AluJb SINE Alu -15 297 81 357 235 0 12 chr2 38817776 38817857 -214438726 + MER103 DNA DNA 77 156 -10 2359 92 0 0 chr2 38818020 38818314 -214438269 - AluSq SINE Alu -19 294 1 2248 105 0 0 chr2 38818325 38818659 -214437924 - AluSx SINE Alu 0 334 1 2216 246 109 20 chr2 38818728 38819731 -214436852 + L2 LINE L2 1975 3062 -251 1180 205 142 8 chr2 38819731 38819999 -214436584 - AluY SINE Alu -2 309 6 263 289 52 60 chr2 38820054 38820286 -214436297 + L2 LINE L2 3083 3312 -1 1262 197 99 0 chr2 38821106 38821461 -214435122 - MER3 DNA MER1_type 0 2624 2235 486 194 0 86 chr2 38821463 38821602 -214434981 - MER3 DNA MER1_type -42 167 41 531 231 186 0 chr2 38821609 38821765 -214434818 + MIR SINE MIR 62 246 -16 2348 97 10 0 chr2 38821767 38822066 -214434517 - AluSx SINE Alu -10 302 1 238 220 0 0 chr2 38822075 38822125 -214434458 + (TTA)n Simple_repeat Simple_repeat 3 52 0 282 224 42 106 chr2 38822170 38822374 -214434209 + MLT1L LTR MaLR 1 267 -348 366 145 87 0 chr2 38822664 38822733 -214433850 + L1MA9 LINE L1 5833 5907 -384 1220 169 61 0 chr2 38822735 38822948 -214433635 + AluJb SINE Alu 87 312 0 1356 188 33 66 chr2 38822954 38823347 -214433236 + L1MA9 LINE L1 5894 6273 -39 1177 118 6 12 chr2 38823557 38823726 -214432857 - AluSp SINE Alu -21 292 125 186 118 0 0 chr2 38823726 38823760 -214432823 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1912 147 7 0 chr2 38823760 38824039 -214432544 - AluSx SINE Alu -28 284 4 266 303 33 16 chr2 38824056 38824178 -214432405 + MIR SINE MIR 120 243 -19 21 36 0 0 chr2 38824296 38824324 -214432259 + AT_rich Low_complexity Low_complexity 1 28 0 2083 109 14 0 chr2 38824460 38824764 -214431819 - AluY SINE Alu 0 308 1 295 337 60 6 chr2 38825821 38825987 -214430596 + L3 LINE CR1 185 359 -1218 1936 168 0 0 chr2 38826108 38826412 -214430171 + AluSx SINE Alu 1 304 -8 460 326 132 4 chr2 38826430 38826657 -214429926 + L3 LINE CR1 565 820 -757 2020 121 7 7 chr2 38826891 38827188 -214429395 - AluJo SINE Alu -15 297 1 376 286 191 6 chr2 38827380 38827558 -214429025 + L3 LINE CR1 1364 1574 -3 1225 137 0 0 chr2 38827760 38827935 -214428648 - AluSx SINE Alu -12 300 126 499 55 55 0 chr2 38827935 38828008 -214428575 - MADE1 DNA Mariner -3 77 1 970 111 0 0 chr2 38828008 38828134 -214428449 - AluSx SINE Alu -186 127 2 731 165 0 24 chr2 38828406 38828533 -214428050 + FLAM_C SINE Alu 1 124 -19 203 161 0 0 chr2 38829049 38829080 -214427503 + (TG)n Simple_repeat Simple_repeat 2 32 0 2212 116 0 0 chr2 38829156 38829450 -214427133 - AluSx SINE Alu -18 294 1 1653 87 0 9 chr2 38830140 38830358 -214426225 + AluSc SINE Alu 84 299 -10 275 283 61 0 chr2 38830518 38830617 -214425966 - MIR SINE MIR -82 180 76 2352 102 0 3 chr2 38830941 38831244 -214425339 + AluSx SINE Alu 1 302 -10 1928 156 0 14 chr2 38832116 38832411 -214424172 + AluJb SINE Alu 1 291 -21 464 233 277 0 chr2 38832561 38832763 -214423820 + MIR SINE MIR 5 262 0 21 36 0 0 chr2 38833288 38833316 -214423267 + AT_rich Low_complexity Low_complexity 1 28 0 258 275 0 0 chr2 38834663 38834723 -214421860 + MIR SINE MIR 38 97 -111 1799 193 113 16 chr2 38834758 38835209 -214421374 - MER50 LTR ERV1 0 734 240 277 263 6 103 chr2 38835451 38835607 -214420976 + MLT1J LTR MaLR 325 465 -46 293 313 38 31 chr2 38835932 38836092 -214420491 - MIR SINE MIR -5 257 97 1298 283 65 18 chr2 38836094 38836586 -214419997 - LTR38 LTR ERV1 -41 515 1 192 336 110 27 chr2 38938763 38938909 -214317674 - L2 LINE L2 -182 3090 2933 243 211 0 0 chr2 38939316 38939368 -214317215 + MIR3 SINE MIR 109 160 -48 1098 276 42 47 chr2 38939788 38940015 -214316568 + L2 LINE L2 2874 3100 -213 279 0 0 0 chr2 38940015 38940046 -214316537 + (CA)n Simple_repeat Simple_repeat 1 31 0 1098 276 42 47 chr2 38940046 38940246 -214316337 + L2 LINE L2 3100 3299 -14 590 325 16 11 chr2 38940409 38940600 -214315983 + MIR SINE MIR 21 212 -50 231 244 26 64 chr2 38940743 38940821 -214315762 + MIR3 SINE MIR 133 207 -1 402 286 33 0 chr2 38941176 38941267 -214315316 + MIR SINE MIR 36 129 -79 202 250 36 0 chr2 38941268 38941324 -214315259 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1655 178 7 7 chr2 38941728 38942014 -214314569 + AluSx SINE Alu 1 286 -26 2009 91 4 0 chr2 38942236 38942490 -214314093 - AluSc SINE Alu -15 294 40 2154 117 0 0 chr2 38942572 38942862 -214313721 - AluSg SINE Alu -18 292 3 412 197 151 92 chr2 38943068 38943238 -214313345 + LTR16A1 LTR ERVL 203 392 -65 4200 89 15 0 chr2 38943238 38943777 -214312806 - L1PA14 LINE L1 -9 6152 5606 412 197 151 92 chr2 38943777 38943845 -214312738 + LTR16A1 LTR ERVL 392 455 -2 1020 155 0 0 chr2 38943966 38944121 -214312462 + FRAM SINE Alu 11 165 -11 2353 144 31 0 chr2 38946090 38946443 -214310140 - MLT1A1 LTR MaLR -1 364 1 276 262 69 69 chr2 38946762 38946907 -214309676 - MIR SINE MIR -71 191 47 2277 113 19 49 chr2 38947074 38947444 -214309139 + THE1B LTR MaLR 1 359 -5 758 296 84 48 chr2 38948724 38949161 -214307422 - MLT1J2 LTR MaLR 0 428 4 23 54 0 0 chr2 38949282 38949319 -214307264 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr2 38949409 38949438 -214307145 + AT_rich Low_complexity Low_complexity 1 29 0 1262 185 13 26 chr2 38950491 38950775 -214305808 - L1MD2 LINE L1 -12 7760 6227 189 147 0 0 chr2 38950795 38950829 -214305754 + (TG)n Simple_repeat Simple_repeat 2 35 0 345 161 35 0 chr2 38951591 38951678 -214304905 + GA-rich Low_complexity Low_complexity 2 91 0 22 0 0 0 chr2 38951823 38951845 -214304738 + AT_rich Low_complexity Low_complexity 1 22 0 492 32 0 0 chr2 38952364 38952426 -214304157 + (CA)n Simple_repeat Simple_repeat 2 63 0 1264 252 27 39 chr2 38952734 38953146 -214303437 - LTR16B LTR ERVL -14 450 44 451 188 0 0 chr2 38953191 38953271 -214303312 - L1MA9 LINE L1 -38 6274 6195 1155 160 5 0 chr2 38954563 38954750 -214301833 + MER2 DNA MER2_type 23 210 -135 236 254 15 15 chr2 38954781 38954848 -214301735 + MER2 DNA MER2_type 274 340 -5 1524 175 36 39 chr2 38954887 38955196 -214301387 - AluJo SINE Alu -4 308 1 217 341 59 15 chr2 38955579 38955714 -214300869 + MIR3 SINE MIR 45 185 -23 * 467 318 99 67 chr2 38955684 38956286 -214300297 + L2 LINE L2 2652 3271 -1 211 268 85 24 chr2 38956289 38956371 -214300212 + MIR SINE MIR 100 186 -76 871 219 135 21 chr2 38956482 38956719 -214299864 + MER58 DNA MER1_type 7 270 -2150 23 33 0 0 chr2 38957097 38957127 -214299456 + AT_rich Low_complexity Low_complexity 1 30 0 273 98 0 0 chr2 38957222 38957263 -214299320 + (GA)n Simple_repeat Simple_repeat 2 42 0 776 187 0 8 chr2 38958786 38958909 -214297674 + FLAM_C SINE Alu 2 123 -20 292 278 28 37 chr2 38958948 38959056 -214297527 - HAL1b LINE L1 -50 1298 1192 2563 146 17 15 chr2 38959056 38959440 -214297143 + MSTB1 LTR MaLR 15 402 -30 234 81 0 0 chr2 38959440 38959477 -214297106 + (TA)n Simple_repeat Simple_repeat 2 38 0 2563 146 17 15 chr2 38959477 38959497 -214297086 + MSTB1 LTR MaLR 402 420 -12 469 257 105 51 chr2 38959532 38959674 -214296909 - HAL1b LINE L1 -183 1165 1032 2315 103 0 6 chr2 38959674 38959986 -214296597 + AluSg SINE Alu 1 310 0 469 257 105 51 chr2 38959986 38960656 -214295927 - HAL1b LINE L1 -316 1032 244 2215 99 24 0 chr2 38960656 38960949 -214295634 - AluSc SINE Alu -9 300 1 469 257 105 51 chr2 38960949 38961128 -214295455 - HAL1b LINE L1 -1104 244 76 204 197 0 33 chr2 38961319 38961380 -214295203 + T-rich Low_complexity Low_complexity 2 60 0 38999 86 9 8 chr2 38961386 38967513 -214289070 - L1PA6 LINE L1 -16 6138 11 180 179 0 0 chr2 38969371 38969410 -214287173 + GA-rich Low_complexity Low_complexity 2 40 0 410 242 24 32 chr2 38969576 38969700 -214286883 - L1ME1 LINE L1 -7 6159 6037 291 255 134 19 chr2 38969839 38969996 -214286587 - L1MCc LINE L1 -4958 1465 1291 396 0 0 0 chr2 38970448 38970492 -214286091 + (CA)n Simple_repeat Simple_repeat 2 45 0 202 360 73 0 chr2 38970550 38970686 -214285897 + L2 LINE L2 2429 2574 -740 534 173 19 0 chr2 38971071 38971175 -214285408 - MER53 DNA DNA -83 106 1 2894 265 36 32 chr2 38971400 38971563 -214285020 + L1M3c LINE L1 3 164 -5977 239 0 32 0 chr2 38971563 38971594 -214284989 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 2894 265 36 32 chr2 38971594 38972229 -214284354 + L1M3c LINE L1 164 804 -5337 1024 228 25 87 chr2 38972229 38972628 -214283955 + MLT1A1 LTR MaLR 1 428 0 3195 223 56 18 chr2 38972628 38973809 -214282774 + L1M3c LINE L1 856 2043 -4168 381 176 15 0 chr2 38974178 38974246 -214282337 - MER5A DNA MER1_type -84 105 37 277 270 56 11 chr2 38974179 38974268 -214282315 + MER5A DNA MER1_type 96 188 -1 * 2631 136 59 20 chr2 38974394 38974836 -214281747 - Tigger2 DNA MER2_type 0 2718 2260 385 188 0 14 chr2 38974812 38974881 -214281702 - Tigger2 DNA MER2_type -2649 69 2 * 3570 192 41 46 chr2 38974909 38976305 -214280278 + L1M4c LINE L1 2027 4271 -2111 2076 152 18 23 chr2 38976312 38976708 -214279875 + L1MA9 LINE L1 4987 5380 -766 300 187 0 27 chr2 38976697 38976772 -214279811 + L1MA9 LINE L1 5721 5793 -541 * 230 178 0 0 chr2 38976794 38976839 -214279744 + LTR66 LTR ERVL 394 438 -172 3314 114 25 25 chr2 38976844 38977044 -214279539 + L1MA9 LINE L1 5785 5984 -328 998 271 139 13 chr2 38977044 38977361 -214279222 + LTR18A LTR ERVL 1 357 0 3314 114 25 25 chr2 38977361 38977688 -214278895 + L1MA9 LINE L1 5983 6312 0 579 196 62 67 chr2 38978531 38978710 -214277873 + MER5B DNA MER1_type 1 178 0 261 282 24 24 chr2 38978723 38978808 -214277775 + MER5B DNA MER1_type 1 85 -93 1129 164 11 16 chr2 38978866 38979055 -214277528 + MER5A DNA MER1_type 1 188 -1 740 248 111 4 chr2 38979055 38979281 -214277302 + MIR SINE MIR 8 257 -5 188 194 0 0 chr2 38979829 38979860 -214276723 + MER5A DNA MER1_type 7 37 -152 342 45 0 0 chr2 38980626 38980670 -214275913 + (TG)n Simple_repeat Simple_repeat 2 45 0 348 197 30 15 chr2 38980695 38980827 -214275756 + (TA)n Simple_repeat Simple_repeat 1 134 0 192 40 0 0 chr2 38980827 38980852 -214275731 + (TG)n Simple_repeat Simple_repeat 1 25 0 2523 113 13 26 chr2 38984323 38984702 -214271881 + THE1C LTR MaLR 1 374 -1 626 260 117 26 chr2 38985090 38985321 -214271262 - MIR SINE MIR 0 262 11 331 238 101 60 chr2 38985565 38985817 -214270766 - MLT1H LTR MaLR -249 300 7 436 222 83 35 chr2 38985833 38985977 -214270606 - MIR SINE MIR 0 262 112 25 0 0 0 chr2 38987571 38987596 -214268987 + AT_rich Low_complexity Low_complexity 1 25 0 264 304 143 0 chr2 38987743 38987855 -214268728 - MIR SINE MIR -131 131 4 281 313 30 20 chr2 38987962 38988061 -214268522 + MIR SINE MIR 50 149 -59 191 255 64 0 chr2 38988558 38988605 -214267978 + L2 LINE L2 3264 3313 0 853 201 6 35 chr2 38990160 38990334 -214266249 + MER45A DNA AcHobo 3 171 -7 623 196 68 56 chr2 38990586 38990871 -214265712 + MLT1A2 LTR MaLR 1 457 0 443 159 0 34 chr2 38990875 38990963 -214265620 + MLT1A2-int LTR MaLR 5 89 -1562 208 248 119 50 chr2 38992167 38992268 -214264315 - L2 LINE L2 -46 3267 3160 281 248 208 27 chr2 38994285 38994434 -214262149 - MIR SINE MIR -56 206 31 314 255 54 82 chr2 38995108 38995292 -214261291 - MLT1K LTR MaLR -47 541 363 1156 209 38 0 chr2 38996005 38996216 -214260367 + MER58A DNA MER1_type 6 224 0 242 303 13 13 chr2 38996258 38996334 -214260249 - MIR SINE MIR -167 95 20 459 283 38 0 chr2 38996354 38996460 -214260123 + MIR SINE MIR 21 130 -132 237 235 0 44 chr2 38998344 38998412 -214258171 + (CA)n Simple_repeat Simple_repeat 2 66 0 2559 108 19 29 chr2 39001012 39001391 -214255192 + THE1C LTR MaLR 1 375 0 28 48 0 0 chr2 39001659 39001701 -214254882 + AT_rich Low_complexity Low_complexity 1 42 0 668 303 159 28 chr2 39001736 39002514 -214254069 - L2 LINE L2 -657 2657 1778 2521 124 36 3 chr2 39002768 39003131 -214253452 - THE1C LTR MaLR 0 375 1 1884 189 54 16 chr2 39004299 39004670 -214251913 - MLT1B LTR MaLR 0 390 6 1969 209 82 15 chr2 39004725 39005198 -214251385 - MLT1D LTR MaLR 0 505 1 21 0 0 0 chr2 39005792 39005813 -214250770 + AT_rich Low_complexity Low_complexity 1 21 0 478 123 25 12 chr2 39007097 39007178 -214249405 - Tigger5 DNA MER2_type 0 2323 2242 2057 70 0 8 chr2 39007650 39007908 -214248675 + AluY SINE Alu 47 302 -9 2144 118 14 0 chr2 39007916 39008203 -214248380 + AluSx SINE Alu 1 291 -21 1015 98 164 89 chr2 39011091 39011305 -214245278 - MER30 DNA MER1_type 0 230 1 21 36 0 0 chr2 39012360 39012388 -214244195 + AT_rich Low_complexity Low_complexity 1 28 0 805 233 141 31 chr2 39014808 39015257 -214241326 + MLT1E LTR MaLR 1 593 0 26 0 0 0 chr2 39016257 39016283 -214240300 + AT_rich Low_complexity Low_complexity 1 26 0 469 136 0 37 chr2 39016284 39016357 -214240226 + FLAM_A SINE Alu 58 129 -182 1639 192 29 13 chr2 39016357 39016664 -214239919 + AluJo SINE Alu 1 312 0 299 296 105 17 chr2 39017661 39017833 -214238750 - MIR SINE MIR -13 249 63 777 303 88 12 chr2 39017944 39018353 -214238230 + L1MC4a LINE L1 5467 5906 -1902 2651 58 0 0 chr2 39019082 39019393 -214237190 + AluY SINE Alu 1 311 0 1502 154 7 40 chr2 39019789 39020062 -214236521 - AluJo SINE Alu -48 264 1 303 270 185 57 chr2 39021376 39021728 -214234855 + L3 LINE CR1 1022 1418 -159 21 36 0 0 chr2 39024167 39024195 -214232388 + GC_rich Low_complexity Low_complexity 1 28 0 1052 170 39 61 chr2 39024798 39024908 -214231675 + MER58A DNA MER1_type 1 112 -2308 1251 170 9 14 chr2 39024908 39025126 -214231457 + MER20 DNA MER1_type 1 217 -2 1052 170 39 61 chr2 39025126 39025244 -214231339 + MER58A DNA MER1_type 112 224 0 258 152 165 25 chr2 39025373 39025452 -214231131 + MER5C DNA MER1_type 6 95 -229 232 192 39 39 chr2 39025596 39025674 -214230909 + MER5C DNA MER1_type 247 324 0 286 77 0 39 chr2 39028251 39028286 -214228297 + (TG)n Simple_repeat Simple_repeat 1 83 0 286 77 0 39 chr2 39028286 39028338 -214228245 + (TG)n Simple_repeat Simple_repeat 2 51 0 270 303 61 65 chr2 39028591 39028822 -214227761 + L3 LINE CR1 654 883 -694 220 240 120 30 chr2 39029131 39029231 -214227352 + MIR3 SINE MIR 100 208 0 2085 108 0 11 chr2 39030071 39030399 -214226184 + AluSq SINE Alu 1 325 0 317 235 0 0 chr2 39030446 39030514 -214226069 - L2 LINE L2 -11 3302 3235 2064 175 57 71 chr2 39030890 39031081 -214225502 + MLT2A2 LTR ERVL 1 193 -361 2274 79 0 0 chr2 39031081 39031384 -214225199 + AluY SINE Alu 1 303 0 2064 175 57 71 chr2 39031384 39031749 -214224834 + MLT2A2 LTR ERVL 193 554 0 1926 133 10 0 chr2 39031948 39032250 -214224333 + L1PA13 LINE L1 5840 6144 -19 503 137 0 0 chr2 39032254 39032327 -214224256 + MLT2A2 LTR ERVL 337 409 -44 392 214 58 10 chr2 39033429 39033532 -214223051 - MER103 DNA DNA -7 159 52 437 220 50 0 chr2 39035032 39035132 -214221451 + MIR SINE MIR 47 151 -111 1675 160 108 7 chr2 39035133 39035440 -214221143 - MER44D DNA MER2_type -1 608 1 683 212 127 0 chr2 39035537 39035726 -214220857 - MIR SINE MIR -14 248 36 428 323 30 0 chr2 39035852 39036016 -214220567 + MIR SINE MIR 74 242 -20 204 40 0 0 chr2 39036287 39036312 -214220271 + (TAA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr2 39036422 39036443 -214220140 + (A)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr2 39037671 39037693 -214218890 + AT_rich Low_complexity Low_complexity 1 22 0 194 81 27 0 chr2 39038870 39038907 -214217676 + (CGGGG)n Simple_repeat Simple_repeat 1 38 0 25 0 0 0 chr2 39038993 39039018 -214217565 + GC_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr2 39039721 39039762 -214216821 + GC_rich Low_complexity Low_complexity 1 41 0 32 26 0 0 chr2 39040449 39040488 -214216095 + AT_rich Low_complexity Low_complexity 1 39 0 414 132 0 0 chr2 39040942 39041018 -214215565 + (TCCCC)n Simple_repeat Simple_repeat 2 77 0 601 103 35 0 chr2 39041034 39041121 -214215462 - AluJ/FLAM SINE Alu -218 94 5 621 263 240 20 chr2 39042212 39042604 -214213979 + L2 LINE L2 2834 3311 -2 237 35 0 0 chr2 39043640 39043669 -214212914 - L1MA9 LINE L1 0 6312 6284 985 253 52 30 chr2 39043679 39044043 -214212540 + L2 LINE L2 2942 3313 0 1835 119 83 7 chr2 39044406 39044683 -214211900 + AluSg1 SINE Alu 1 298 -11 189 303 40 40 chr2 39045814 39045890 -214210693 - L2 LINE L2 -6 3266 3191 23 0 0 0 chr2 39045961 39045984 -214210599 + AT_rich Low_complexity Low_complexity 1 23 0 1837 174 52 6 chr2 39046307 39046652 -214209931 + MLT1A1 LTR MaLR 4 364 -1 3039 164 12 37 chr2 39047573 39048170 -214208413 - L1MC1 LINE L1 -1 6332 5751 1807 147 41 26 chr2 39048425 39048765 -214207818 + MLT1B LTR MaLR 5 349 -41 244 139 0 0 chr2 39048828 39048864 -214207719 + MLT1B LTR MaLR 353 388 -2 458 277 8 23 chr2 39049399 39049529 -214207054 - MIR3 SINE MIR -15 193 66 413 246 39 78 chr2 39049660 39049839 -214206744 + MIR SINE MIR 20 191 -71 2123 182 101 22 chr2 39050448 39050954 -214205629 + MER74A LTR ERVL 1 546 -12 8563 172 67 39 chr2 39051400 39053119 -214203464 + L1MC3 LINE L1 5433 7182 -603 819 189 7 7 chr2 39053119 39053267 -214203316 + FRAM SINE Alu 22 169 -7 8563 172 67 39 chr2 39053267 39053889 -214202694 + L1MC3 LINE L1 7182 7785 0 25 31 0 0 chr2 39053972 39054004 -214202579 + AT_rich Low_complexity Low_complexity 1 32 0 234 329 44 76 chr2 39054701 39054859 -214201724 - L2 LINE L2 -4 3268 3116 283 238 250 48 chr2 39055071 39055184 -214201399 + L2 LINE L2 2747 2836 -436 2737 84 19 3 chr2 39055184 39055553 -214201030 - THE1C LTR MaLR 0 375 1 283 238 250 48 chr2 39055553 39055702 -214200881 + L2 LINE L2 2836 3043 -229 339 227 41 31 chr2 39057901 39057998 -214198585 - MIR SINE MIR -99 163 66 7260 42 2 2 chr2 39057998 39059596 -214196987 + L1PA4 LINE L1 4558 6155 0 2234 102 7 7 chr2 39061376 39061679 -214194904 + AluSg SINE Alu 1 303 -7 1262 153 28 5 chr2 39061687 39061903 -214194680 + AluJb SINE Alu 86 306 -6 27 29 0 0 chr2 39062065 39062099 -214194484 + AT_rich Low_complexity Low_complexity 1 34 0 22 56 0 0 chr2 39063184 39063220 -214193363 + AT_rich Low_complexity Low_complexity 1 36 0 3296 226 36 3 chr2 39063814 39064768 -214191815 - L1M4 LINE L1 -799 5347 4363 791 223 47 10 chr2 39064764 39064957 -214191626 - L1MDa LINE L1 -6191 349 150 * 2559 45 0 16 chr2 39065235 39065548 -214191035 - AluY SINE Alu -3 308 1 436 354 89 43 chr2 39066398 39067311 -214189272 - L2 LINE L2 -11 3261 2307 441 307 42 34 chr2 39067327 39067565 -214189018 - L2 LINE L2 -2907 407 168 234 0 0 0 chr2 39068217 39068243 -214188340 + (TTTTA)n Simple_repeat Simple_repeat 1 26 0 1028 121 6 0 chr2 39068243 39068409 -214188174 - MER2 DNA MER2_type -96 249 83 12492 179 7 11 chr2 39068416 39072086 -214184497 - L1PB1 LINE L1 -5 6146 2496 333 320 99 41 chr2 39072528 39072700 -214183883 - MIR3 SINE MIR -9 199 18 292 310 121 0 chr2 39073027 39073143 -214183440 + L2 LINE L2 3133 3262 -10 274 67 44 0 chr2 39073309 39073354 -214183229 + MADE1 DNA Mariner 34 80 0 691 254 198 8 chr2 39073355 39073729 -214182854 - MLT1H LTR MaLR -29 520 76 199 359 23 23 chr2 39074287 39074418 -214182165 + MIR SINE MIR 36 166 -96 1600 181 27 24 chr2 39074807 39075105 -214181478 - AluJb SINE Alu -13 299 1 215 328 31 0 chr2 39075772 39075836 -214180747 - L2 LINE L2 0 3313 3248 351 318 48 79 chr2 39075871 39075967 -214180616 - L2 LINE L2 -251 3062 2965 333 0 0 0 chr2 39075967 39076004 -214180579 + (TG)n Simple_repeat Simple_repeat 2 38 0 351 318 48 79 chr2 39076004 39076270 -214180313 - L2 LINE L2 -348 2965 2723 292 303 70 21 chr2 39076316 39076458 -214180125 - L2 LINE L2 -578 2736 2588 231 236 200 45 chr2 39077801 39077911 -214178672 + MIR SINE MIR 16 142 -120 183 71 0 143 chr2 39078046 39078088 -214178495 + MIR SINE MIR 227 262 0 1133 206 17 38 chr2 39078121 39078413 -214178170 + MLT1D LTR MaLR 2 287 -218 202 343 45 0 chr2 39079288 39079355 -214177228 + L2 LINE L2 3202 3271 -1 240 175 62 38 chr2 39079412 39079492 -214177091 - L1ME2 LINE L1 -6 6227 6146 377 228 24 73 chr2 39079516 39079679 -214176904 - L1ME2 LINE L1 -177 6056 5903 2489 83 3 0 chr2 39079679 39079991 -214176592 - AluSp SINE Alu 0 313 1 377 228 24 73 chr2 39079991 39080033 -214176550 - L1ME2 LINE L1 -330 5903 5861 1820 201 20 5 chr2 39080045 39080484 -214176099 - L1ME2 LINE L1 -345 5888 5443 430 223 0 0 chr2 39080499 39080593 -214175990 - Tigger7 DNA MER2_type -2 2489 2396 1320 180 35 8 chr2 39080597 39080853 -214175730 - Tigger7 DNA MER2_type -2223 264 2 6041 246 76 40 chr2 39080854 39083650 -214172933 - L1ME2 LINE L1 -780 5435 2538 915 286 63 51 chr2 39083647 39084466 -214172117 - L1ME2 LINE L1 -4181 2215 1387 * 600 207 93 81 chr2 39084675 39084921 -214171662 - MLT1A1 LTR MaLR 0 365 117 471 224 63 0 chr2 39084968 39085111 -214171472 - MER104 DNA Tc2 0 180 29 961 190 11 16 chr2 39085128 39085312 -214171271 + MER5A DNA MER1_type 7 189 0 214 362 28 91 chr2 39085377 39085664 -214170919 - L2 LINE L2 -9 3263 2995 429 283 137 24 chr2 39087447 39087659 -214168924 + MIR SINE MIR 15 250 -12 222 355 182 9 chr2 39089081 39089191 -214167392 - L2 LINE L2 0 3272 3144 2029 151 0 7 chr2 39089424 39089722 -214166861 - AluSx SINE Alu -12 300 5 274 346 26 43 chr2 39089884 39090115 -214166468 - L2 LINE L2 -178 3094 2868 41069 50 4 0 chr2 39090345 39096459 -214160124 + L1PA5 LINE L1 1 6137 -17 423 92 0 0 chr2 39096459 39096524 -214160059 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 259 157 12 chr2 39096723 39096889 -214159694 - MIR3 SINE MIR -7 201 12 402 57 0 0 chr2 39097061 39097114 -214159469 + (CCA)n Simple_repeat Simple_repeat 1 53 0 466 280 33 35 chr2 39097883 39098060 -214158523 + MIR3 SINE MIR 15 191 -17 295 352 65 26 chr2 39098061 39098291 -214158292 + L3b LINE CR1 1264 1502 -81 252 276 58 23 chr2 39098889 39098976 -214157607 + MER91C DNA MER1_type 19 108 -32 218 310 0 35 chr2 39100668 39100726 -214155857 - L2 LINE L2 -26 3246 3191 23 0 0 0 chr2 39100766 39100789 -214155794 + AT_rich Low_complexity Low_complexity 1 23 0 262 283 42 78 chr2 39100820 39101011 -214155572 - L2 LINE L2 -214 3058 2875 1671 193 0 24 chr2 39103445 39103741 -214152842 + AluJo SINE Alu 1 289 -23 2907 237 40 22 chr2 39103759 39103957 -214152626 + L1MEc LINE L1 45 238 -6158 1803 145 46 40 chr2 39103957 39104330 -214152253 - THE1C LTR MaLR 0 375 1 2907 237 40 22 chr2 39104330 39104937 -214151646 + L1MEc LINE L1 238 864 -5532 332 230 14 0 chr2 39104922 39104996 -214151587 - MLT1F1 LTR MaLR -488 79 5 * 1268 153 22 22 chr2 39105450 39105673 -214150910 - MER74A LTR ERVL 0 558 336 628 212 34 14 chr2 39105673 39105819 -214150764 + L1MEc LINE L1 545 693 -5703 1400 231 26 35 chr2 39105819 39106161 -214150422 - MER74A LTR ERVL -215 343 5 765 221 55 20 chr2 39106740 39106939 -214149644 + L1MEc LINE L1 37 242 -6154 962 114 43 104 chr2 39106939 39107150 -214149433 - THE1C LTR MaLR 0 375 178 1502 128 0 14 chr2 39108518 39108737 -214147846 - AluSg/x SINE Alu -14 296 81 2160 116 135 5 chr2 39109013 39109392 -214147191 + MSTA LTR MaLR 1 428 0 630 248 95 58 chr2 39110105 39110347 -214146236 + MIR SINE MIR 1 251 -11 252 235 0 0 chr2 39110353 39110421 -214146162 + (ATG)n Simple_repeat Simple_repeat 1 68 0 2328 91 0 28 chr2 39111745 39112086 -214144497 - AluSg SINE Alu 0 310 1 2502 139 29 2 chr2 39112103 39112520 -214144063 + L1MA5 LINE L1 5873 6300 0 2352 108 0 0 chr2 39113851 39114148 -214142435 + AluSx SINE Alu 6 302 -10 313 279 91 42 chr2 39114253 39114418 -214142165 + MIR SINE MIR 20 192 -70 340 209 15 0 chr2 39115136 39115203 -214141380 - L2 LINE L2 -7 3265 3198 534 259 54 5 chr2 39115415 39115600 -214140983 - L3 LINE CR1 -244 1333 1140 258 246 14 0 chr2 39116904 39116973 -214139610 + MLT1L LTR MaLR 6 75 -540 603 304 60 30 chr2 39117013 39117312 -214139271 + MLT1J LTR MaLR 105 412 -99 233 266 16 0 chr2 39117312 39117376 -214139207 + (CCCA)n Simple_repeat Simple_repeat 3 67 0 503 269 130 78 chr2 39117386 39117780 -214138803 + L2 LINE L2 2390 2811 -503 4014 194 25 45 chr2 39117780 39118769 -214137814 + LTR5 LTR ERVK 1 969 0 503 269 130 78 chr2 39118769 39118821 -214137762 + L2 LINE L2 2811 2859 -455 424 321 118 14 chr2 39118881 39119168 -214137415 + L2 LINE L2 2994 3310 -3 2436 90 0 0 chr2 39119684 39119995 -214136588 + AluY SINE Alu 1 311 0 435 324 19 29 chr2 39119995 39120195 -214136388 + MIR SINE MIR 41 240 -22 2226 145 13 20 chr2 39120212 39120430 -214136153 - MLT1B LTR MaLR 0 390 175 1860 160 3 26 chr2 39120430 39120737 -214135846 - AluJb SINE Alu -12 300 1 2226 145 13 20 chr2 39120737 39120911 -214135672 - MLT1B LTR MaLR -215 175 1 324 98 0 0 chr2 39121605 39121656 -214134927 - MADE1 DNA Mariner 0 80 30 310 205 63 79 chr2 39121695 39121822 -214134761 + MIR SINE MIR 92 216 -46 434 284 17 0 chr2 39121869 39121985 -214134598 - MIR SINE MIR -2 260 143 392 211 184 0 chr2 39122050 39122164 -214134419 - MER5A DNA MER1_type -6 183 49 453 131 75 75 chr2 39122164 39122271 -214134312 + Charlie7 DNA MER1_type 1588 1694 -918 3385 141 28 0 chr2 39122342 39122909 -214133674 + L1MB5 LINE L1 5378 5960 -214 1215 174 18 0 chr2 39122968 39123192 -214133391 - L1M4 LINE L1 -1057 5089 4862 1527 176 101 3 chr2 39123192 39123488 -214133095 + MLT2C2 LTR ERVL 1 325 -139 1892 205 17 7 chr2 39123490 39123900 -214132683 - L1M4 LINE L1 -1969 4177 3764 316 170 290 0 chr2 39124740 39124840 -214131743 - L3b LINE CR1 -168 1415 1287 358 205 39 0 chr2 39126086 39126164 -214130419 + MIR SINE MIR 43 123 -139 325 293 58 7 chr2 39126326 39126464 -214130119 - MIR SINE MIR -54 154 10 740 282 80 52 chr2 39127385 39127786 -214128797 - L2 LINE L2 -14 3299 2888 2124 127 3 13 chr2 39127967 39128274 -214128309 + AluSx SINE Alu 1 304 -8 518 269 63 17 chr2 39128832 39129007 -214127576 - L2 LINE L2 -49 3264 3082 2285 88 7 3 chr2 39130301 39130597 -214125986 + AluSc SINE Alu 1 297 -12 276 30 0 0 chr2 39130657 39130690 -214125893 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 424 275 171 39 chr2 39130690 39130989 -214125594 - L2 LINE L2 -15 3298 2960 902 289 53 21 chr2 39131230 39131648 -214124935 + MLT1H LTR MaLR 111 541 -8 924 233 50 50 chr2 39131660 39132063 -214124520 + HAL1b LINE L1 944 1346 -2 262 211 0 0 chr2 39132093 39132150 -214124433 + L1MC4a LINE L1 6809 6865 -943 * 904 205 77 17 chr2 39132143 39132377 -214124206 + L1MD3 LINE L1 7731 7978 -17 473 256 58 0 chr2 39135064 39135185 -214121398 + MER94 DNA DNA 2 129 -5 1271 194 50 90 chr2 39136921 39137400 -214119183 - MLT2C2 LTR ERVL 0 464 5 2365 102 0 0 chr2 39137575 39137879 -214118704 + AluSq SINE Alu 1 304 -9 2255 101 104 0 chr2 39138156 39138483 -214118100 + THE1B LTR MaLR 1 361 -3 366 265 11 81 chr2 39139751 39139936 -214116647 + MER5B DNA MER1_type 7 178 0 190 266 16 31 chr2 39139984 39140048 -214116535 - MIR3 SINE MIR -3 205 143 215 304 27 47 chr2 39143491 39143639 -214112944 + MER5A DNA MER1_type 17 161 -28 199 191 21 0 chr2 39144603 39144650 -214111933 - L2 LINE L2 -2 3270 3223 216 0 0 0 chr2 39145427 39145451 -214111132 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 246 327 94 13 chr2 39147739 39147898 -214108685 + L2 LINE L2 3101 3272 0 373 286 86 14 chr2 39148605 39148745 -214107838 + MIR SINE MIR 48 197 -65 701 270 32 5 chr2 39149611 39149796 -214106787 - MLT1I LTR MaLR -6 403 214 2284 112 3 10 chr2 39150560 39150874 -214105709 - AluSx SINE Alu 0 312 1 553 198 25 0 chr2 39151268 39151389 -214105194 + MIR SINE MIR 90 213 -49 192 77 0 0 chr2 39151543 39151569 -214105014 + (A)n Simple_repeat Simple_repeat 1 26 0 277 206 20 0 chr2 39151609 39151677 -214104906 + MIR SINE MIR 85 142 -66 446 123 41 0 chr2 39152129 39152202 -214104381 - MADE1 DNA Mariner -4 76 1 935 237 92 100 chr2 39153135 39153676 -214102907 - MLT1H LTR MaLR 0 549 13 278 287 83 32 chr2 39153804 39153961 -214102622 - MIR SINE MIR -19 243 79 224 210 65 0 chr2 39153981 39154043 -214102540 + MIR SINE MIR 124 189 -73 307 339 30 26 chr2 39155028 39155201 -214101382 + MIR SINE MIR 19 192 -62 424 293 227 0 chr2 39155346 39155575 -214101008 + HAL1 LINE L1 1 281 -2226 * 1161 250 88 0 chr2 39155568 39155840 -214100743 + HAL1 LINE L1 596 891 -1616 * 8546 161 43 11 chr2 39155833 39157459 -214099124 - L1 LINE L1 -1810 4336 2659 4958 237 77 24 chr2 39157457 39157523 -214099060 + HAL1 LINE L1 895 956 -1551 * 2225 150 3 33 chr2 39157523 39157882 -214098701 + MER7A DNA MER2_type 1 346 0 4958 237 77 24 chr2 39157882 39159344 -214097239 + HAL1 LINE L1 956 2504 -3 239 290 0 14 chr2 39159591 39159660 -214096923 + L3 LINE CR1 1495 1562 -15 1272 63 31 0 chr2 39159829 39159988 -214096595 + L1PA13 LINE L1 6000 6163 0 2862 117 44 2 chr2 39160154 39160563 -214096020 - MSTB LTR MaLR 0 426 1 822 301 103 30 chr2 39161316 39161715 -214094868 - LTR16B LTR ERVL 0 464 37 555 108 0 24 chr2 39161726 39161809 -214094774 - FLAM_C SINE Alu -7 136 56 306 313 173 6 chr2 39164123 39164331 -214092252 + MIR SINE MIR 8 248 -14 640 261 116 9 chr2 39165153 39165368 -214091215 + MIR SINE MIR 25 262 0 1453 146 21 4 chr2 39167221 39167460 -214089123 - MER49 LTR ERV1 -680 243 1 2286 109 3 0 chr2 39168423 39168725 -214087858 - AluSq SINE Alu -10 303 1 369 43 0 0 chr2 39168827 39168874 -214087709 + (TG)n Simple_repeat Simple_repeat 2 48 0 2345 192 54 23 chr2 39169639 39170124 -214086459 - MLT1D LTR MaLR 0 505 6 200 204 23 0 chr2 39171035 39171079 -214085504 + (TGGA)n Simple_repeat Simple_repeat 4 48 0 768 164 249 4 chr2 39172169 39172425 -214084158 - MER7A DNA MER2_type 0 337 1 855 130 51 0 chr2 39172864 39173002 -214083581 - L1MB8 LINE L1 -5 6173 6029 11950 35 1 0 chr2 39173002 39175113 -214081470 - L1PA4 LINE L1 -3 6152 4042 4058 169 25 20 chr2 39175113 39175183 -214081400 - L1MB7 LINE L1 -143 6041 5973 2372 107 54 28 chr2 39175183 39175537 -214081046 + THE1B LTR MaLR 1 363 -1 4058 169 25 20 chr2 39175537 39175590 -214080993 - L1MB7 LINE L1 -211 5973 5922 2099 153 86 3 chr2 39175590 39175950 -214080633 + MLT1B LTR MaLR 1 390 0 4058 169 25 20 chr2 39175950 39176716 -214079867 - L1MB7 LINE L1 -262 5922 5148 726 293 127 30 chr2 39176716 39177181 -214079402 + LTR67 LTR ERVL 41 550 -7 2420 96 59 36 chr2 39177442 39177798 -214078785 + THE1B LTR MaLR 1 364 0 345 24 0 0 chr2 39179830 39179872 -214076711 + (TA)n Simple_repeat Simple_repeat 2 43 0 1712 149 0 7 chr2 39179874 39180156 -214076427 + AluY SINE Alu 2 281 -30 207 0 0 0 chr2 39180170 39180193 -214076390 + (TA)n Simple_repeat Simple_repeat 2 24 0 2544 141 0 0 chr2 39180193 39180554 -214076029 - L1PB4 LINE L1 -14 6142 5782 315 122 0 0 chr2 39180554 39180603 -214075980 + (TA)n Simple_repeat Simple_repeat 2 50 0 1630 110 61 4 chr2 39180604 39180849 -214075734 - L1PB4 LINE L1 -367 5789 5531 330 324 55 0 chr2 39181479 39181624 -214074959 - MIR SINE MIR -20 242 90 204 231 179 26 chr2 39181980 39182058 -214074525 + MIR SINE MIR 10 99 -163 1361 249 29 36 chr2 39182901 39183343 -214073240 + L1ME1 LINE L1 5723 6161 -5 221 343 0 0 chr2 39183348 39183421 -214073162 + MIR SINE MIR 186 258 -4 2623 43 0 0 chr2 39184411 39184711 -214071872 - AluY SINE Alu -11 300 1 317 328 155 0 chr2 39185408 39185524 -214071059 - L2 LINE L2 -5 3267 3134 315 327 77 19 chr2 39187677 39187885 -214068698 - MIR SINE MIR -39 223 4 258 239 0 0 chr2 39188733 39188804 -214067779 + (CA)n Simple_repeat Simple_repeat 2 72 0 1194 165 85 18 chr2 39188804 39189028 -214067555 + MER8 DNA MER2_type 1 239 0 379 257 83 33 chr2 39189558 39189721 -214066862 + MLT1F1 LTR MaLR 14 184 -365 227 284 0 14 chr2 39189753 39189827 -214066756 + CT-rich Low_complexity Low_complexity 2 74 0 823 264 20 51 chr2 39189873 39190127 -214066456 + MLT1F1 LTR MaLR 322 567 0 184 242 0 0 chr2 39190323 39190356 -214066227 + L3b LINE CR1 1480 1512 -71 * 302 355 36 7 chr2 39190353 39190491 -214066092 + MER5A DNA MER1_type 47 188 -1 194 392 0 0 chr2 39190841 39190920 -214065663 + MIR SINE MIR 34 112 -150 1155 265 105 58 chr2 39190922 39191495 -214065088 - L1ME4a LINE L1 -139 5982 5383 221 232 71 0 chr2 39191514 39191570 -214065013 + MIR SINE MIR 126 185 -77 1999 149 0 3 chr2 39192139 39192625 -214063958 - AluJb SINE Alu 0 312 1 24 0 0 0 chr2 39192970 39192994 -214063589 + AT_rich Low_complexity Low_complexity 1 24 0 349 364 59 0 chr2 39193889 39194125 -214062458 - MIR SINE MIR -3 259 10 467 284 104 27 chr2 39195117 39195269 -214061314 - MIR SINE MIR -21 241 65 1528 225 139 26 chr2 39195269 39195723 -214060860 - MLT1D LTR MaLR 0 505 1 467 284 104 27 chr2 39195723 39195792 -214060791 - MIR SINE MIR -197 65 3 202 65 22 43 chr2 39197814 39197860 -214058723 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 1453 205 23 23 chr2 39197945 39198252 -214058331 + AluJo SINE Alu 1 307 -5 527 239 34 40 chr2 39198930 39199106 -214057477 + MER5B DNA MER1_type 1 175 -3 193 298 58 66 chr2 39199797 39199918 -214056665 - MIR3 SINE MIR -86 122 3 441 319 39 39 chr2 39201250 39201432 -214055151 + MIR SINE MIR 2 183 -79 218 319 111 30 chr2 39201572 39201707 -214054876 - L3 LINE CR1 -153 1424 1279 230 250 67 0 chr2 39201735 39201795 -214054788 + MER91C DNA MER1_type 36 99 -41 354 313 159 31 chr2 39201917 39202112 -214054471 - L3 LINE CR1 -357 1220 1001 207 0 0 0 chr2 39202269 39202292 -214054291 + (TG)n Simple_repeat Simple_repeat 2 24 0 2448 81 0 0 chr2 39202960 39203257 -214053326 + AluSx SINE Alu 3 299 -13 1047 164 113 94 chr2 39203538 39203856 -214052727 - MSTC LTR MaLR 0 428 51 884 105 126 14 chr2 39204037 39204176 -214052407 - AluSc SINE Alu -17 292 137 2151 109 21 0 chr2 39204176 39204459 -214052124 - AluSx SINE Alu -23 289 1 237 198 93 58 chr2 39204505 39204591 -214051992 + MIR SINE MIR 103 191 -71 2440 76 3 0 chr2 39205064 39205365 -214051218 - AluY SINE Alu -9 302 1 234 294 0 15 chr2 39207859 39207927 -214048656 + MIR SINE MIR 25 91 -117 2266 73 0 11 chr2 39208154 39208485 -214048098 + AluY SINE Alu 1 328 0 219 318 24 72 chr2 39209898 39210030 -214046553 + MIR SINE MIR 18 147 -61 1236 272 102 49 chr2 39210639 39211355 -214045228 - L2 LINE L2 -209 3104 2338 1774 179 3 13 chr2 39211355 39211668 -214044915 - AluJb SINE Alu 0 312 3 1236 272 102 49 chr2 39211668 39211811 -214044772 - L2 LINE L2 -975 2338 2204 613 293 130 9 chr2 39211811 39212135 -214044448 - L2 LINE L2 -1696 1618 1256 200 236 18 0 chr2 39212133 39212188 -214044395 + L2 LINE L2 3253 3308 -5 * 226 220 59 129 chr2 39213292 39213547 -214043036 - HAL1 LINE L1 -868 1639 1403 236 206 132 0 chr2 39213582 39213650 -214042933 - L1MEd LINE L1 -4864 1255 1179 518 157 11 0 chr2 39213653 39213742 -214042841 - AluJo/FRAM SINE Alu -15 297 208 * 754 132 0 0 chr2 39213741 39213847 -214042736 - AluJo/FLAM SINE Alu -205 107 2 325 275 42 78 chr2 39213858 39214051 -214042532 - L1MEd LINE L1 -4945 1174 989 531 234 168 58 chr2 39214429 39214570 -214042013 - L1MEd LINE L1 -5571 548 424 1996 128 0 7 chr2 39214570 39214895 -214041688 - AluSx SINE Alu 0 324 2 531 234 168 58 chr2 39214895 39215026 -214041557 - L1MEd LINE L1 -5695 424 245 2925 264 81 24 chr2 39215132 39215344 -214041239 + L2 LINE L2 1388 1586 -1728 959 101 17 6 chr2 39215344 39215522 -214041061 + (TC)n Simple_repeat Simple_repeat 1 180 0 2925 264 81 24 chr2 39215522 39216344 -214040239 + L2 LINE L2 1586 2481 -833 222 37 0 0 chr2 39217083 39217110 -214039473 + (A)n Simple_repeat Simple_repeat 1 27 0 288 254 0 0 chr2 39218777 39218836 -214037747 + MIR SINE MIR 20 78 -184 2077 120 3 0 chr2 39219787 39220108 -214036475 - AluSx SINE Alu 0 325 4 276 311 65 39 chr2 39220504 39220764 -214035819 + L2 LINE L2 2991 3257 -56 1787 167 0 25 chr2 39221864 39222181 -214034402 + AluJb SINE Alu 1 309 -3 2439 73 3 0 chr2 39222440 39222740 -214033843 - AluY SINE Alu -10 301 1 232 186 175 72 chr2 39222934 39223031 -214033552 + MIR SINE MIR 46 152 -110 611 230 54 71 chr2 39223063 39223302 -214033281 + LTR16A LTR ERVL 203 437 -13 224 258 169 11 chr2 39223686 39223775 -214032808 - MIR SINE MIR -135 127 25 23 0 0 0 chr2 39226037 39226060 -214030523 + AT_rich Low_complexity Low_complexity 1 23 0 1762 126 87 25 chr2 39226062 39226377 -214030206 + AluSx SINE Alu 1 332 0 2034 152 58 28 chr2 39228062 39228720 -214027863 - LTR1B LTR ERV1 0 826 110 271 286 134 0 chr2 39229124 39229243 -214027340 + L2 LINE L2 3137 3271 -1 268 274 102 88 chr2 39230589 39230874 -214025709 + L2 LINE L2 2565 2853 -461 344 286 64 49 chr2 39231523 39231917 -214024666 - LTR33A LTR ERVL 0 523 66 260 206 59 24 chr2 39233301 39233471 -214023112 + (TTATA)n Simple_repeat Simple_repeat 2 177 0 * 279 200 65 12 chr2 39233351 39233521 -214023062 + (TA)n Simple_repeat Simple_repeat 1 179 0 343 280 21 11 chr2 39233589 39233682 -214022901 + MER119 DNA MER1_type 2 95 -488 357 226 130 0 chr2 39233691 39233806 -214022777 + MER119 DNA MER1_type 452 581 -2 495 277 39 13 chr2 39234249 39234404 -214022179 + MIR SINE MIR 96 254 -8 183 42 0 0 chr2 39234409 39234433 -214022150 + (TTA)n Simple_repeat Simple_repeat 1 24 0 233 241 37 0 chr2 39234497 39234551 -214022032 + L2 LINE L2 3216 3271 -1 256 326 75 48 chr2 39236747 39236894 -214019689 - L2 LINE L2 -176 3096 2946 290 279 8 62 chr2 39236993 39237122 -214019461 - MIR SINE MIR -17 245 124 240 374 22 63 chr2 39237240 39237510 -214019073 - L2 LINE L2 -507 2807 2549 1422 197 9 38 chr2 39237761 39238076 -214018507 - MLT1D LTR MaLR -1 504 199 1366 158 0 21 chr2 39238070 39238304 -214018279 - MLT1D LTR MaLR -269 236 8 * 432 344 32 28 chr2 39238372 39238590 -214017993 - LTR67 LTR ERVL -273 284 66 1763 173 7 13 chr2 39238621 39238927 -214017656 + AluJb SINE Alu 1 304 -8 415 296 105 46 chr2 39239084 39239408 -214017175 + L3 LINE CR1 1201 1543 -34 2241 117 0 7 chr2 39239492 39239801 -214016782 - AluSx SINE Alu -5 307 1 231 209 0 0 chr2 39240643 39240686 -214015897 + (TG)n Simple_repeat Simple_repeat 1 43 0 218 269 30 0 chr2 39241178 39241245 -214015338 + CT-rich Low_complexity Low_complexity 5 73 0 426 20 0 0 chr2 39241950 39242001 -214014582 + (CA)n Simple_repeat Simple_repeat 2 52 0 425 221 71 26 chr2 39242625 39242779 -214013804 - L2 LINE L2 -4 3309 3149 590 268 106 98 chr2 39242796 39243307 -214013276 + LTR67 LTR ERVL 4 518 -39 933 301 125 18 chr2 39243335 39244368 -214012215 - L2 LINE L2 -168 3145 2005 333 196 52 124 chr2 39244982 39245135 -214011448 - L2 LINE L2 0 3313 3172 266 318 19 9 chr2 39246111 39246218 -214010365 - MIR SINE MIR -73 189 82 270 255 236 32 chr2 39246882 39247039 -214009544 + MIR SINE MIR 18 206 -56 327 130 0 0 chr2 39247594 39247648 -214008935 + (T)n Simple_repeat Simple_repeat 1 54 0 1844 152 28 3 chr2 39248074 39248363 -214008220 - AluSx SINE Alu -16 296 1 734 162 0 132 chr2 39248392 39248589 -214007994 + FRAM SINE Alu 1 171 -5 209 306 0 0 chr2 39248632 39248694 -214007889 + MIR SINE MIR 161 222 -40 555 332 70 23 chr2 39248705 39249091 -214007492 - L2 LINE L2 0 3313 2910 232 149 0 21 chr2 39249466 39249513 -214007070 + MIR3 SINE MIR 159 204 -4 242 192 19 0 chr2 39250499 39250551 -214006032 + MER5C DNA MER1_type 71 123 -201 295 133 50 0 chr2 39250917 39250977 -214005606 - L1ME4a LINE L1 -5 6116 6054 2382 113 0 0 chr2 39251545 39251854 -214004729 - AluSg SINE Alu -1 309 1 400 223 21 0 chr2 39251958 39252052 -214004531 + MER94 DNA DNA 39 134 0 252 366 36 25 chr2 39252055 39252334 -214004249 + L2 LINE L2 2325 2606 -708 2256 92 14 7 chr2 39253296 39253591 -214002992 - AluSx SINE Alu -15 297 1 320 259 84 7 chr2 39253593 39253736 -214002847 + Charlie7 DNA MER1_type 2452 2605 -7 276 98 0 0 chr2 39254614 39254655 -214001928 + MADE1 DNA Mariner 36 76 -4 2154 117 0 7 chr2 39256046 39256374 -214000209 + AluSx SINE Alu 2 312 0 1960 161 3 0 chr2 39256670 39256962 -213999621 - AluJb SINE Alu -19 293 1 1489 243 74 12 chr2 39257431 39257462 -213999121 + MLT2E LTR ERVL 7 35 -593 2614 184 42 22 chr2 39257462 39257891 -213998692 + MLT1D LTR MaLR 1 443 -62 1847 101 0 63 chr2 39257891 39258177 -213998406 - AluSg SINE Alu -8 302 35 2614 184 42 22 chr2 39258177 39258242 -213998341 + MLT1D LTR MaLR 443 505 0 1489 243 74 12 chr2 39258242 39258629 -213997954 + MLT2E LTR ERVL 35 451 -177 895 242 57 18 chr2 39258653 39259030 -213997553 - L1ME LINE L1 -585 5577 5188 1897 142 0 40 chr2 39259041 39259360 -213997223 + AluJb SINE Alu 1 307 0 340 189 113 125 chr2 39259394 39259583 -213997000 + L1ME3A LINE L1 5607 5794 -376 254 307 80 34 chr2 39259627 39259803 -213996780 + L1ME3A LINE L1 5978 6161 -9 265 258 51 30 chr2 39259890 39259994 -213996589 + MER5A DNA MER1_type 31 125 -53 504 308 69 12 chr2 39260936 39261183 -213995400 + MIR SINE MIR 2 262 0 384 124 29 162 chr2 39261716 39261762 -213994821 + MER34C LTR ERV1 47 73 -512 2874 117 54 5 chr2 39261762 39262172 -213994411 - MER57B LTR ERV1 -4 430 1 384 124 29 162 chr2 39262172 39262230 -213994353 + MER34C LTR ERV1 73 137 -448 980 225 64 73 chr2 39262232 39262654 -213993929 + MER34B LTR ERV1 148 565 0 402 268 84 21 chr2 39263096 39263238 -213993345 + MIR3 SINE MIR 41 191 -17 2071 142 3 0 chr2 39264638 39264948 -213991635 + AluSx SINE Alu 1 311 -1 3553 139 10 33 chr2 39265291 39265867 -213990716 + MER34B LTR ERV1 3 565 0 1826 154 64 42 chr2 39265868 39266198 -213990385 - MER1B DNA MER1_type 0 337 1 25 51 0 0 chr2 39266393 39266432 -213990151 + AT_rich Low_complexity Low_complexity 1 39 0 790 255 102 100 chr2 39268083 39268377 -213988206 + MLT1L LTR MaLR 217 615 0 1705 167 78 0 chr2 39268437 39268719 -213987864 - AluSx SINE Alu -8 304 1 622 152 9 62 chr2 39268876 39268897 -213987686 - MLT1A1 LTR MaLR 0 374 353 2377 118 48 22 chr2 39268897 39269252 -213987331 + THE1B LTR MaLR 1 364 0 622 152 9 62 chr2 39269252 39269369 -213987214 - MLT1A1 LTR MaLR -21 353 256 731 230 95 52 chr2 39269563 39270013 -213986570 - LTR1B LTR ERV1 -333 493 39 1359 167 8 17 chr2 39270022 39270261 -213986322 - MLT1A1 LTR MaLR -110 255 19 256 333 0 0 chr2 39271015 39271105 -213985478 + MLT1J LTR MaLR 111 200 -311 2456 137 118 138 chr2 39271903 39272410 -213984173 - LTR48 LTR ERV1 0 787 271 2064 146 3 0 chr2 39272410 39272719 -213983864 - AluSx SINE Alu -2 310 1 2456 137 118 138 chr2 39272719 39272875 -213983708 - LTR48 LTR ERV1 -516 271 138 2242 118 0 0 chr2 39272875 39273179 -213983404 + AluSx SINE Alu 9 312 0 2456 137 118 138 chr2 39273179 39273261 -213983322 - LTR48 LTR ERV1 -649 138 56 * 3436 117 65 11 chr2 39273260 39273801 -213982782 - LTR24B LTR ERV1 -6 570 1 436 160 0 40 chr2 39273801 39273863 -213982720 - MER39 LTR ERV1 -648 59 1 868 308 110 28 chr2 39274009 39274585 -213981998 + L2 LINE L2 2647 3299 -14 1260 164 29 5 chr2 39274869 39275077 -213981506 - MER20 DNA MER1_type -4 215 3 184 316 0 38 chr2 39275169 39275248 -213981335 - L2 LINE L2 0 3313 3238 2041 121 0 16 chr2 39275662 39275968 -213980615 + AluSq SINE Alu 1 301 -12 2046 113 41 7 chr2 39276259 39276551 -213980032 + AluSc SINE Alu 1 302 -7 431 204 28 9 chr2 39277016 39277124 -213979459 + L1MB7 LINE L1 6074 6183 -1 830 83 0 0 chr2 39277134 39277242 -213979341 + L1PA5 LINE L1 6044 6151 -3 836 140 16 75 chr2 39277249 39277435 -213979148 + L1MB8 LINE L1 5656 5830 -348 2790 122 9 9 chr2 39277438 39277871 -213978712 + L1MA2 LINE L1 5865 6297 -7 1532 147 83 15 chr2 39277874 39278161 -213978422 - AluSx SINE Alu 0 305 1 2031 154 14 14 chr2 39278180 39278536 -213978047 + L1MB8 LINE L1 5823 6178 0 313 257 208 0 chr2 39278661 39278762 -213977821 - MER5A DNA MER1_type -16 173 52 1091 184 17 60 chr2 39278767 39279000 -213977583 - AluJb SINE Alu -3 309 87 191 211 0 0 chr2 39279011 39279049 -213977534 - MER5A DNA MER1_type -148 41 4 2181 112 7 0 chr2 39279466 39279761 -213976822 - AluSp SINE Alu -16 297 1 347 339 75 9 chr2 39279998 39280343 -213976240 - L1M4 LINE L1 -1304 4842 4475 803 254 43 26 chr2 39280403 39280635 -213975948 + MIR SINE MIR 6 241 -21 387 241 35 26 chr2 39280695 39280811 -213975772 + L1MC/D LINE L1 5531 5647 -2161 914 216 77 10 chr2 39280832 39281123 -213975460 - MER90 LTR ERV1 0 614 212 271 348 61 9 chr2 39281152 39281267 -213975316 - MER90 LTR ERV1 -491 123 3 324 250 33 11 chr2 39281292 39281384 -213975199 + L1MC/D LINE L1 5706 5799 -2009 22 0 0 0 chr2 39281757 39281779 -213974804 + AT_rich Low_complexity Low_complexity 1 22 0 2301 152 36 31 chr2 39282112 39282660 -213973923 + MLT2A2 LTR ERVL 1 554 0 2255 104 0 0 chr2 39284003 39284301 -213972282 - AluSg1 SINE Alu -11 298 1 286 187 60 113 chr2 39285547 39285697 -213970886 + MIR SINE MIR 82 223 -39 316 267 142 8 chr2 39286301 39286421 -213970162 + MER5A DNA MER1_type 1 136 -53 4388 114 27 5 chr2 39286439 39287060 -213969523 - MER41B LTR ERV1 0 635 1 601 234 86 6 chr2 39287623 39287798 -213968785 + LTR37B LTR ERV1 3 191 -277 559 183 39 0 chr2 39287809 39287913 -213968670 + MER20 DNA MER1_type 112 219 0 475 254 163 29 chr2 39290708 39290917 -213965666 + MIR SINE MIR 16 252 -10 231 193 211 0 chr2 39292388 39292445 -213964138 - L2 LINE L2 -14 3299 3231 1994 141 7 0 chr2 39292745 39293043 -213963540 - AluSx SINE Alu -12 300 1 2162 72 31 7 chr2 39293369 39293660 -213962923 - AluSx SINE Alu -14 298 1 21 82 0 0 chr2 39294225 39294274 -213962309 + GC_rich Low_complexity Low_complexity 1 49 0 26 30 0 0 chr2 39294941 39294974 -213961609 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr2 39295280 39295302 -213961281 + AT_rich Low_complexity Low_complexity 1 22 0 1647 162 32 0 chr2 39295651 39295935 -213960648 + AluJo SINE Alu 1 293 -19 374 207 69 11 chr2 39296305 39296392 -213960191 + MIR SINE MIR 71 162 -100 1075 244 46 37 chr2 39297479 39297827 -213958756 + L2 LINE L2 1347 1697 -1617 798 179 114 46 chr2 39297867 39298147 -213958436 - L1MEc LINE L1 -4182 2214 1916 971 154 5 77 chr2 39299056 39299264 -213957319 + MER3 DNA MER1_type 6 198 -11 260 26 0 26 chr2 39301037 39301075 -213955508 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 9776 21 3 216 chr2 39301075 39302809 -213953774 - SVA Other Other -20 1366 3 24 0 0 0 chr2 39302861 39302885 -213953698 + AT_rich Low_complexity Low_complexity 1 24 0 183 49 73 0 chr2 39303523 39303564 -213953019 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 314 281 94 35 chr2 39304688 39304891 -213951692 - L1ME3 LINE L1 -224 5938 5724 20550 108 12 46 chr2 39304896 39311350 -213945233 - L1PA7 LINE L1 0 6154 9 440 293 104 15 chr2 39311371 39311712 -213944871 - L1ME3 LINE L1 -451 5719 5347 317 219 171 0 chr2 39311756 39311838 -213944745 - L2 LINE L2 -2 3311 3216 354 275 118 45 chr2 39312357 39312535 -213944048 + MIR SINE MIR 8 198 -64 942 165 104 0 chr2 39313344 39313508 -213943075 - MER58A DNA MER1_type -43 181 1 347 322 39 81 chr2 39313555 39313912 -213942671 - L2 LINE L2 -1358 1956 1615 337 230 150 35 chr2 39314266 39314379 -213942204 - L2 LINE L2 0 3313 3188 255 250 31 0 chr2 39314680 39314744 -213941839 - MIR SINE MIR -36 226 161 342 182 15 121 chr2 39315051 39315183 -213941400 + MER104 DNA Tc2 1 118 -62 223 267 0 100 chr2 39315474 39315564 -213941019 + L2 LINE L2 3232 3312 -1 236 366 73 49 chr2 39315569 39315856 -213940727 - L2 LINE L2 -1979 1335 1042 26 30 0 0 chr2 39316020 39316053 -213940530 + AT_rich Low_complexity Low_complexity 1 33 0 1487 153 54 0 chr2 39316053 39316314 -213940269 - L1PB4 LINE L1 -2 6154 5880 753 224 0 33 chr2 39317079 39317265 -213939318 + MER5A DNA MER1_type 5 183 -6 1708 249 27 27 chr2 39318148 39318594 -213937989 + LTR40c LTR ERVL 8 453 -12 25 51 0 0 chr2 39321878 39321917 -213934666 + AT_rich Low_complexity Low_complexity 1 39 0 9016 197 26 17 chr2 39322188 39324481 -213932102 - L1MB3 LINE L1 -27 6392 4061 2795 70 3 3 chr2 39324481 39324836 -213931747 + THE1A LTR MaLR 1 355 0 9016 197 26 17 chr2 39324836 39325642 -213930941 - L1MB3 LINE L1 -2358 4061 3264 29982 108 11 30 chr2 39325650 39332159 -213924424 - L1PA7 LINE L1 0 6469 2 6509 75 13 23 chr2 39332311 39333241 -213923342 - SVA Other Other -1 1385 465 4598 208 72 47 chr2 39333279 39335133 -213921450 - L1MB3 LINE L1 -3101 3281 1368 2345 82 14 0 chr2 39335133 39335425 -213921158 + AluY SINE Alu 1 296 -15 4598 208 72 47 chr2 39335425 39335736 -213920847 - L1MB3 LINE L1 -5014 1368 1066 8322 119 16 12 chr2 39335741 39337034 -213919549 + HSMAR2 DNA Mariner 5 1301 -1 2183 101 13 7 chr2 39337152 39337459 -213919124 + AluSx SINE Alu 1 309 -3 867 271 130 16 chr2 39338104 39338780 -213917803 - L1M4 LINE L1 -1363 4783 4031 230 185 33 22 chr2 39338841 39338933 -213917650 + CT-rich Low_complexity Low_complexity 1 93 0 1459 191 65 0 chr2 39338947 39339209 -213917374 - AluJb SINE Alu -33 279 1 452 312 40 15 chr2 39339346 39339639 -213916944 - L1M4 LINE L1 -2309 3837 3530 229 224 86 0 chr2 39339816 39339874 -213916709 - L1MB7 LINE L1 -37 6147 6085 * 1989 189 30 61 chr2 39339848 39340437 -213916146 - L1MB7 LINE L1 -817 5329 4787 1590 288 68 10 chr2 39340446 39341276 -213915307 - L1M4 LINE L1 -1065 5081 4204 2277 249 54 11 chr2 39341276 39341904 -213914679 - L2 LINE L2 -275 3038 2386 1128 274 98 30 chr2 39342389 39342990 -213913593 - L2 LINE L2 -2 3311 2679 31 0 0 0 chr2 39343345 39343376 -213913207 + AT_rich Low_complexity Low_complexity 1 31 0 29 60 0 0 chr2 39343468 39343518 -213913065 + AT_rich Low_complexity Low_complexity 1 50 0 233 29 29 0 chr2 39343632 39343666 -213912917 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 2687 53 18 0 chr2 39344362 39344703 -213911880 + L1PA7 LINE L1 5804 6150 -4 308 192 0 125 chr2 39345096 39345216 -213911367 + L1MC5 LINE L1 7809 7913 -48 9877 58 11 102 chr2 39345833 39347345 -213909238 - SVA Other Other 0 1386 12 190 381 71 32 chr2 39347362 39347488 -213909095 - L2 LINE L2 -25 3247 3117 587 170 0 2 chr2 39347537 39347771 -213908812 + AluJo SINE Alu 1 282 -30 351 0 0 0 chr2 39347771 39347810 -213908773 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 23 0 0 0 chr2 39349069 39349092 -213907491 + AT_rich Low_complexity Low_complexity 1 23 0 2284 109 0 0 chr2 39349295 39349597 -213906986 - AluSx SINE Alu -10 302 1 631 277 41 62 chr2 39349707 39349949 -213906634 + L2 LINE L2 3031 3267 -5 737 190 50 17 chr2 39350025 39350204 -213906379 - MER5A DNA MER1_type -1 188 4 38 61 0 0 chr2 39350874 39350940 -213905643 + AT_rich Low_complexity Low_complexity 1 66 0 185 200 11 44 chr2 39352007 39352097 -213904486 + CT-rich Low_complexity Low_complexity 2 88 0 21 0 0 0 chr2 39352522 39352543 -213904040 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 39352712 39352737 -213903846 + AT_rich Low_complexity Low_complexity 1 25 0 677 165 253 0 chr2 39352843 39353013 -213903570 + MER58A DNA MER1_type 9 221 -3 22 35 0 0 chr2 39353840 39353869 -213902714 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr2 39354372 39354395 -213902188 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 784 300 116 16 chr2 39354400 39354787 -213901796 + L3 LINE CR1 399 824 -753 634 148 25 169 chr2 39354821 39355058 -213901525 + L1MC3 LINE L1 7562 7764 -21 2990 238 47 57 chr2 39355255 39356273 -213900310 + L1M4 LINE L1 3446 4453 -1693 3031 157 10 34 chr2 39356291 39356770 -213899813 + L1MC1 LINE L1 5751 6215 -118 2149 129 0 0 chr2 39356770 39357064 -213899519 + AluSx SINE Alu 1 294 -18 3031 157 10 34 chr2 39357064 39357175 -213899408 + L1MC1 LINE L1 6215 6327 -6 435 256 56 0 chr2 39358237 39358362 -213898221 - MIR SINE MIR -10 252 121 21 36 0 0 chr2 39358663 39358691 -213897892 + AT_rich Low_complexity Low_complexity 1 28 0 2233 76 23 23 chr2 39358855 39359156 -213897427 + AluY SINE Alu 1 301 -10 2446 91 0 0 chr2 39359230 39359537 -213897046 + AluSx SINE Alu 1 307 -5 46 92 0 0 chr2 39360411 39360541 -213896042 + AT_rich Low_complexity Low_complexity 1 130 0 525 339 42 17 chr2 39361037 39361273 -213895310 - MIR SINE MIR -14 248 7 457 185 17 101 chr2 39361831 39361900 -213894683 - MIR SINE MIR -152 110 54 2102 116 6 31 chr2 39361900 39362218 -213894365 - AluSx SINE Alu -2 310 1 457 185 17 101 chr2 39362218 39362267 -213894316 - MIR SINE MIR -208 54 2 180 242 0 0 chr2 39362823 39362856 -213893727 - L2 LINE L2 -865 2449 2417 566 331 19 19 chr2 39362898 39363267 -213893316 + L1ME3A LINE L1 489 857 -5262 766 234 85 17 chr2 39363540 39363846 -213892737 + L1ME1 LINE L1 5342 5712 -472 1261 200 83 3 chr2 39363853 39364153 -213892430 + L1ME1 LINE L1 5838 6161 -5 257 208 38 0 chr2 39364261 39364314 -213892269 + Tigger7 DNA MER2_type 2427 2481 -6 396 0 0 0 chr2 39364316 39364360 -213892223 + (CTA)n Simple_repeat Simple_repeat 3 46 0 510 316 76 16 chr2 39364373 39364823 -213891760 + L1ME3A LINE L1 2337 2813 -3316 255 332 43 28 chr2 39364822 39365033 -213891550 + L1ME3A LINE L1 5393 5606 -539 * 364 286 45 19 chr2 39365079 39365233 -213891350 + L1ME3A LINE L1 5777 5934 -219 1832 168 13 25 chr2 39365296 39365612 -213890971 + AluJo SINE Alu 1 312 0 231 267 27 0 chr2 39366251 39366336 -213890247 + (TA)n Simple_repeat Simple_repeat 1 87 0 1781 161 11 7 chr2 39367238 39367524 -213889059 + AluJo SINE Alu 1 287 -25 960 240 59 2 chr2 39368160 39368397 -213888186 + MIR SINE MIR 2 248 -14 447 324 56 44 chr2 39368813 39369063 -213887520 + MIR SINE MIR 10 262 0 434 248 20 0 chr2 39369227 39369328 -213887255 + MER5B DNA MER1_type 1 103 -75 2236 189 42 36 chr2 39369332 39369881 -213886702 - L1ME1 LINE L1 -9 6157 5606 189 159 29 145 chr2 39369895 39369964 -213886619 + MER5B DNA MER1_type 118 178 0 359 282 78 10 chr2 39370163 39370266 -213886317 - L2 LINE L2 -4 3309 3200 413 306 62 12 chr2 39371206 39371464 -213885119 + L1ME4a LINE L1 5597 5867 -254 232 175 70 0 chr2 39371537 39371594 -213884989 - L1MA9 LINE L1 0 6312 6252 2103 102 4 0 chr2 39372264 39372538 -213884045 + AluSq SINE Alu 1 275 -38 600 101 0 0 chr2 39372540 39372629 -213883954 + (TAGA)n Simple_repeat Simple_repeat 3 91 0 2043 111 55 3 chr2 39373332 39373675 -213882908 - L1MA9 LINE L1 -3 6309 5949 41409 45 1 2 chr2 39373689 39379852 -213876731 - L1PA4 LINE L1 -2 6153 2 506 307 118 64 chr2 39380852 39381440 -213875143 + L2 LINE L2 2600 3267 -5 2249 81 0 17 chr2 39382918 39383216 -213873367 + AluSp SINE Alu 1 293 -20 22 35 0 0 chr2 39383456 39383485 -213873098 + AT_rich Low_complexity Low_complexity 1 29 0 288 333 46 0 chr2 39383767 39383854 -213872729 - L2 LINE L2 -46 3226 3136 2391 97 0 0 chr2 39384278 39384586 -213871997 + AluSc SINE Alu 1 308 -1 27 29 0 0 chr2 39385973 39386007 -213870576 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr2 39386499 39386527 -213870056 + AT_rich Low_complexity Low_complexity 1 28 0 507 319 151 54 chr2 39386624 39386745 -213869838 + L1ME4a LINE L1 5327 5435 -686 2762 133 11 5 chr2 39386745 39387190 -213869393 - LTR7 LTR ERV1 -2 448 1 507 319 151 54 chr2 39387190 39387696 -213868887 + L1ME4a LINE L1 5435 6015 -106 201 147 0 0 chr2 39387868 39387902 -213868681 + (CA)n Simple_repeat Simple_repeat 1 34 0 1454 146 43 47 chr2 39388682 39388935 -213867648 + AluJb SINE Alu 38 289 -23 31 0 0 0 chr2 39388935 39388966 -213867617 + AT_rich Low_complexity Low_complexity 1 31 0 291 197 0 15 chr2 39388983 39389049 -213867534 - LTR37A LTR ERV1 -319 107 43 2001 79 7 10 chr2 39389052 39389342 -213867241 - MER1A DNA MER1_type 0 529 241 3946 113 141 35 chr2 39389350 39390352 -213866231 + pTR5 LTR ERV1 769 2024 -414 231 287 53 0 chr2 39390353 39390447 -213866136 + LTR30 LTR ERV1 544 642 -80 1512 82 0 5 chr2 39390450 39390670 -213865913 + pTR5 LTR ERV1 172 390 -2048 1161 181 39 51 chr2 39390670 39390924 -213865659 - MER1A DNA MER1_type -276 251 1 266 316 89 36 chr2 39390953 39391121 -213865462 - MIR SINE MIR -73 189 13 224 333 107 19 chr2 39391808 39391967 -213864616 - MIR3 SINE MIR -25 183 11 450 258 131 30 chr2 39392056 39392254 -213864329 - MIR SINE MIR -43 219 2 259 224 19 65 chr2 39392297 39392404 -213864179 + GA-rich Low_complexity Low_complexity 1 102 0 3207 235 23 18 chr2 39392773 39393632 -213862951 - L1ME1 LINE L1 -7 6228 5365 6210 219 65 39 chr2 39393768 39395600 -213860983 - L1ME1 LINE L1 -1234 4981 3081 1192 53 13 0 chr2 39395600 39395750 -213860833 - L1PA7 LINE L1 -2 6152 6001 6210 219 65 39 chr2 39395750 39396097 -213860486 - L1ME1 LINE L1 -3134 3081 2745 751 275 17 8 chr2 39396131 39396371 -213860212 - L1ME1 LINE L1 -6057 339 98 1483 209 69 12 chr2 39397126 39397548 -213859035 - MER69 DNA AcHobo 0 2526 2081 184 294 110 29 chr2 39398201 39398337 -213858246 + L2 LINE L2 2867 3013 -300 213 309 175 8 chr2 39398424 39398550 -213858033 + L2 LINE L2 3158 3304 -9 224 333 0 12 chr2 39398657 39398738 -213857845 + G-rich Low_complexity Low_complexity 1 80 0 2133 146 14 27 chr2 39398764 39399133 -213857450 - THE1B LTR MaLR 0 364 1 214 328 115 0 chr2 39399706 39399828 -213856755 - MIR3 SINE MIR -61 147 12 1170 112 12 0 chr2 39400250 39400411 -213856172 - FAM SINE Alu -2 47 1 2615 220 46 45 chr2 39401085 39401551 -213855032 - L1ME1 LINE L1 -5 6579 6110 2270 90 3 10 chr2 39401551 39401852 -213854731 + AluSx SINE Alu 1 299 -13 2615 220 46 45 chr2 39401852 39402185 -213854398 - L1ME1 LINE L1 -474 6110 5779 203 307 57 0 chr2 39402735 39402823 -213853760 + L2 LINE L2 2296 2388 -926 29 0 0 0 chr2 39403599 39403628 -213852955 + AT_rich Low_complexity Low_complexity 1 29 0 34 0 0 0 chr2 39403696 39403730 -213852853 + AT_rich Low_complexity Low_complexity 1 34 0 566 319 136 37 chr2 39403920 39404620 -213851963 + L1 LINE L1 4073 4841 -1305 528 256 83 11 chr2 39406045 39406247 -213850336 + MIR SINE MIR 3 218 -44 281 309 73 0 chr2 39406817 39406927 -213849656 - MIR SINE MIR -115 147 30 260 278 0 28 chr2 39407624 39407696 -213848887 + L2 LINE L2 3194 3263 -9 423 0 0 0 chr2 39408041 39408088 -213848495 + (CA)n Simple_repeat Simple_repeat 2 48 0 550 270 0 8 chr2 39408203 39408329 -213848254 - MIR SINE MIR -112 150 26 6961 207 60 60 chr2 39408928 39409039 -213847544 - L1ME1 LINE L1 -1084 5480 5370 351 0 0 0 chr2 39409039 39409078 -213847505 + (TTA)n Simple_repeat Simple_repeat 2 40 0 6961 207 60 60 chr2 39409078 39409282 -213847301 - L1ME1 LINE L1 -1194 5370 5167 1963 174 40 0 chr2 39409282 39409633 -213846950 + MLT1A1 LTR MaLR 1 365 0 6961 207 60 60 chr2 39409633 39410123 -213846460 - L1ME1 LINE L1 -1397 5167 4678 206 239 211 28 chr2 39410123 39410232 -213846351 + MIR SINE MIR 103 231 -31 6961 207 60 60 chr2 39410232 39411397 -213845186 - L1ME1 LINE L1 -1886 4678 3514 442 0 35 0 chr2 39411397 39411455 -213845128 + (CA)n Simple_repeat Simple_repeat 1 60 0 6961 207 60 60 chr2 39411455 39413855 -213842728 - L1ME1 LINE L1 -3050 3514 1037 486 246 39 109 chr2 39414498 39414782 -213841801 + L1M4b LINE L1 12 275 -6584 592 280 51 100 chr2 39414914 39415325 -213841258 + L1M4b LINE L1 798 1188 -5667 24 0 0 0 chr2 39415372 39415396 -213841187 + AT_rich Low_complexity Low_complexity 1 24 0 1144 277 30 60 chr2 39415417 39415696 -213840887 + L1M4b LINE L1 1861 2116 -4843 2272 98 0 0 chr2 39415696 39415992 -213840591 + AluSg SINE Alu 1 296 -14 1144 277 30 60 chr2 39415992 39416275 -213840308 + L1M4b LINE L1 2116 2406 -4553 947 235 29 5 chr2 39416285 39416538 -213840045 + L1ME1 LINE L1 5664 5929 -254 529 214 42 30 chr2 39416524 39416692 -213839891 - L1M4 LINE L1 -1598 4548 4379 * 198 367 13 0 chr2 39417921 39418000 -213838583 - L2 LINE L2 -6 3266 3187 1764 149 14 11 chr2 39418567 39418843 -213837740 - AluJo SINE Alu -16 296 20 413 239 66 46 chr2 39418940 39419137 -213837446 - MIR SINE MIR -15 247 47 286 289 30 50 chr2 39419216 39419417 -213837166 + L2 LINE L2 1570 1766 -1548 1641 152 0 15 chr2 39419746 39420010 -213836573 - AluSx SINE Alu -6 306 47 6388 122 27 12 chr2 39420386 39421610 -213834973 - L1MA4A LINE L1 0 6303 5061 706 208 34 39 chr2 39422721 39422899 -213833684 - MER5B DNA MER1_type 0 178 2 22 56 0 0 chr2 39423197 39423233 -213833350 + AT_rich Low_complexity Low_complexity 1 36 0 1221 270 91 40 chr2 39424397 39424978 -213831605 - MLT1L LTR MaLR -4 611 1 180 77 0 0 chr2 39424991 39425017 -213831566 + (CA)n Simple_repeat Simple_repeat 2 27 0 252 212 12 59 chr2 39425081 39425166 -213831417 - L2 LINE L2 -3 3269 3189 212 292 62 0 chr2 39425230 39425295 -213831288 + L2 LINE L2 2986 3054 -218 1803 189 21 9 chr2 39426180 39426514 -213830069 - MER58B DNA MER1_type -3 338 1 2665 123 41 7 chr2 39426587 39427001 -213829582 + MSTA LTR MaLR 1 428 0 1204 179 5 0 chr2 39428067 39428274 -213828309 + MER3 DNA MER1_type 2 209 0 2044 112 54 3 chr2 39428879 39429055 -213827528 - AluSc SINE Alu 0 309 111 554 0 15 0 chr2 39429055 39429121 -213827462 + (TTTTA)n Simple_repeat Simple_repeat 1 67 0 2044 112 54 3 chr2 39429121 39429238 -213827345 - AluSc SINE Alu -198 111 1 194 210 32 32 chr2 39430135 39430197 -213826386 - L2 LINE L2 -212 3060 2999 245 95 0 24 chr2 39430618 39430660 -213825923 + (CA)n Simple_repeat Simple_repeat 1 41 0 437 243 27 9 chr2 39430705 39430816 -213825767 + L2 LINE L2 3188 3300 -13 1950 219 105 10 chr2 39431125 39431619 -213824964 - L1MD2 LINE L1 -226 6133 5593 * 6697 33 0 0 chr2 39431613 39432391 -213824192 - L1PA4 LINE L1 -3 6152 5375 3158 19 0 0 chr2 39432389 39432757 -213823826 + L1PA4 LINE L1 4985 5352 -794 * 569 144 65 105 chr2 39432759 39432912 -213823671 - L1MD2 LINE L1 -607 5559 5413 21 0 0 0 chr2 39432917 39432938 -213823645 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39432964 39432993 -213823590 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39433036 39433115 -213823468 - MER112 DNA MER1_type -178 82 1 2131 129 27 0 chr2 39433211 39433506 -213823077 + AluSg SINE Alu 1 303 -7 362 339 58 18 chr2 39433824 39434154 -213822429 + L1ME LINE L1 5469 5811 -351 21 0 0 0 chr2 39434360 39434381 -213822202 + AT_rich Low_complexity Low_complexity 1 21 0 1205 198 34 23 chr2 39440604 39440867 -213815716 - ORSL DNA AcHobo -1 274 9 653 203 0 0 chr2 39441235 39441353 -213815230 + FLAM_A SINE Alu 1 118 -15 28 0 0 0 chr2 39441366 39441394 -213815189 + AT_rich Low_complexity Low_complexity 1 28 0 740 164 20 108 chr2 39441650 39441845 -213814738 - MER58A DNA MER1_type 0 224 47 365 181 42 0 chr2 39442420 39442492 -213814091 + MER53 DNA DNA 15 89 -100 * 366 205 13 0 chr2 39442429 39442507 -213814076 - MER53 DNA DNA -16 173 95 22 0 0 0 chr2 39443511 39443533 -213813050 + GC_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 39445210 39445242 -213811341 + GC_rich Low_complexity Low_complexity 1 32 0 414 296 16 0 chr2 39446583 39446708 -213809875 - MIR SINE MIR -104 158 32 2139 96 6 38 chr2 39446799 39447113 -213809470 + AluSx SINE Alu 1 304 -8 2270 89 30 7 chr2 39447386 39447689 -213808894 - AluSx SINE Alu -2 310 1 591 143 71 29 chr2 39449614 39449754 -213806829 - MER104 DNA Tc2 -3 177 32 2687 78 120 0 chr2 39449794 39450194 -213806389 - LTR7 LTR ERV1 -2 448 1 2413 95 50 13 chr2 39450194 39450572 -213806011 - HERVH LTR ERV1 0 7713 7322 1399 134 18 5 chr2 39450570 39450787 -213805796 - HERVH LTR ERV1 -1894 5819 5600 * 4552 136 1 1 chr2 39450788 39451450 -213805133 - HERVH LTR ERV1 -2564 5149 4488 3589 89 4 6 chr2 39451452 39451955 -213804628 - HERVH LTR ERV1 -3720 3993 3492 888 149 20 0 chr2 39451945 39452093 -213804490 - HERVH LTR ERV1 -4423 3290 3140 * 20637 92 14 25 chr2 39452087 39455105 -213801478 - HERVH LTR ERV1 -4726 2987 1 2653 85 126 0 chr2 39455107 39455505 -213801078 - LTR7 LTR ERV1 -2 448 1 560 176 101 91 chr2 39455880 39456079 -213800504 + L1MC4 LINE L1 7842 8042 0 241 323 10 35 chr2 39456556 39456740 -213799843 + CT-rich Low_complexity Low_complexity 1 179 0 2155 118 14 0 chr2 39457119 39457416 -213799167 - AluSx SINE Alu -11 301 1 975 114 0 0 chr2 39457737 39457903 -213798680 + (TC)n Simple_repeat Simple_repeat 1 166 0 514 306 155 57 chr2 39458202 39458796 -213797787 - L3 LINE CR1 -174 1403 752 1899 132 11 7 chr2 39459208 39459516 -213797067 - AluJb SINE Alu 0 309 1 655 286 39 20 chr2 39460162 39460417 -213796166 + MIR SINE MIR 2 261 -1 561 286 40 52 chr2 39460625 39460877 -213795706 + MIR SINE MIR 13 261 -1 803 84 0 0 chr2 39462035 39462142 -213794441 - FLAM_A SINE Alu -3 139 33 450 330 24 15 chr2 39462344 39462550 -213794033 - MIR SINE MIR -29 233 26 1649 195 133 25 chr2 39463082 39463554 -213793029 - Charlie1b DNA MER1_type 0 523 1 2508 47 0 3 chr2 39463579 39463877 -213792706 + AluY SINE Alu 1 297 -14 363 23 0 0 chr2 39463887 39463931 -213792652 + (TG)n Simple_repeat Simple_repeat 1 44 0 481 305 38 30 chr2 39464447 39464683 -213791900 - MIR SINE MIR -2 260 23 613 267 37 0 chr2 39466044 39466205 -213790378 + MIR3 SINE MIR 30 196 -12 26 30 0 0 chr2 39466232 39466265 -213790318 + AT_rich Low_complexity Low_complexity 1 33 0 300 27 0 0 chr2 39468568 39468605 -213787978 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 257 0 0 29 chr2 39469022 39469056 -213787527 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 201 108 0 0 chr2 39469175 39469212 -213787371 + (T)n Simple_repeat Simple_repeat 1 37 0 341 354 133 19 chr2 39469463 39469875 -213786708 + L2 LINE L2 2855 3313 0 233 328 72 65 chr2 39470049 39470342 -213786241 - L2 LINE L2 -1812 1502 1208 717 260 82 27 chr2 39470415 39470781 -213785802 + L1ME4a LINE L1 5615 6000 -121 4696 164 30 3 chr2 39470871 39471735 -213784848 - L1PA13 LINE L1 -992 5154 4268 6390 102 11 0 chr2 39471735 39472750 -213783833 + L1PA13 LINE L1 5141 6163 0 366 295 31 106 chr2 39473068 39473140 -213783443 - MIR SINE MIR -6 256 180 2454 81 3 0 chr2 39473140 39473449 -213783134 + AluY SINE Alu 1 310 -1 366 295 31 106 chr2 39473449 39473603 -213782980 - MIR SINE MIR -82 180 47 1812 183 86 3 chr2 39474326 39474686 -213781897 + MLT1B LTR MaLR 1 390 0 720 247 172 62 chr2 39474690 39475063 -213781520 - LTR16A LTR ERVL -12 438 25 3113 145 48 43 chr2 39476167 39476375 -213780208 + LTR9 LTR ERV1 3 208 -404 2326 85 6 38 chr2 39476375 39476414 -213780169 - AluSg SINE Alu -1 309 270 180 77 0 0 chr2 39476414 39476440 -213780143 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2326 85 6 38 chr2 39476440 39476719 -213779864 - AluSg SINE Alu -40 270 1 3113 145 48 43 chr2 39476719 39477117 -213779466 + LTR9 LTR ERV1 208 612 0 303 234 173 30 chr2 39477544 39477741 -213778842 + L1ME4a LINE L1 5892 6116 -5 1683 170 133 3 chr2 39477804 39478128 -213778455 - MER47A DNA MER2_type 0 366 1 189 0 0 0 chr2 39480177 39480198 -213776385 + (TTTTC)n Simple_repeat Simple_repeat 5 25 0 7699 91 19 0 chr2 39480201 39482039 -213774544 - L1PA8 LINE L1 -14 6158 4293 414 339 24 6 chr2 39482375 39482543 -213774040 + MIR3 SINE MIR 31 201 -7 1518 155 40 65 chr2 39483833 39484155 -213772428 + L1MB2 LINE L1 5857 6170 -1 363 227 31 21 chr2 39485811 39485908 -213770675 + MIR3 SINE MIR 108 205 -3 652 287 203 20 chr2 39486201 39486644 -213769939 - MLT1L LTR MaLR -85 530 7 869 252 150 23 chr2 39486787 39487228 -213769355 + L1ME4a LINE L1 5584 6080 -41 2554 62 0 7 chr2 39487688 39487997 -213768586 + AluY SINE Alu 1 307 -4 2314 84 3 13 chr2 39488131 39488439 -213768144 + AluSq SINE Alu 9 313 0 351 0 0 0 chr2 39489213 39489252 -213767331 + (CA)n Simple_repeat Simple_repeat 1 39 0 339 318 53 0 chr2 39489306 39489438 -213767145 + L3 LINE CR1 998 1136 -441 321 250 86 35 chr2 39489459 39489575 -213767008 + L2 LINE L2 3151 3272 0 393 351 22 0 chr2 39489586 39489771 -213766812 + L3 LINE CR1 1170 1358 -219 188 314 139 58 chr2 39489905 39490042 -213766541 - L2 LINE L2 -4 3268 3121 647 159 143 0 chr2 39490565 39490691 -213765892 + L1MB7 LINE L1 6041 6184 0 223 258 142 42 chr2 39491003 39491123 -213765460 + MIR3 SINE MIR 34 165 -43 192 247 0 68 chr2 39491187 39491260 -213765323 - MIR SINE MIR -77 185 118 472 254 7 29 chr2 39491909 39492047 -213764536 + MIR3 SINE MIR 65 199 -9 257 250 146 10 chr2 39492296 39492392 -213764191 + MIR SINE MIR 1 109 -153 205 323 21 0 chr2 39492649 39492742 -213763841 + GA-rich Low_complexity Low_complexity 4 98 0 593 272 46 6 chr2 39493125 39493298 -213763285 + MIR SINE MIR 21 200 -62 2259 119 0 6 chr2 39493323 39493634 -213762949 - AluSx SINE Alu -3 309 1 302 271 220 11 chr2 39494116 39494293 -213762290 - MIR SINE MIR -32 230 17 2161 120 113 8 chr2 39495384 39495766 -213760817 + MSTA LTR MaLR 4 425 -3 9262 141 30 27 chr2 39495771 39497344 -213759239 + MSTA-int LTR MaLR 3 1580 0 1580 164 212 8 chr2 39497344 39497698 -213758885 + MSTA LTR MaLR 1 426 -2 1261 165 19 0 chr2 39499580 39499786 -213756797 - MER6B DNA MER2_type 0 210 1 484 234 66 7 chr2 39500745 39500882 -213755701 - MER58B DNA MER1_type 0 341 197 44579 39 4 9 chr2 39501400 39507585 -213748998 - L1PA4 LINE L1 0 6155 1 293 298 24 0 chr2 39509676 39509799 -213746784 + MIR SINE MIR 16 141 -67 603 323 68 53 chr2 39510306 39511124 -213745459 - HAL1b LINE L1 -514 834 4 1038 260 70 54 chr2 39512184 39512772 -213743811 - L1MEc LINE L1 -5017 1379 783 616 320 92 73 chr2 39512772 39513539 -213743044 + L2 LINE L2 1997 2805 -508 216 97 0 0 chr2 39513539 39513570 -213743013 + (CA)n Simple_repeat Simple_repeat 2 32 0 616 320 92 73 chr2 39513570 39514089 -213742494 + L2 LINE L2 2805 3313 0 234 0 0 0 chr2 39515060 39515086 -213741497 + (T)n Simple_repeat Simple_repeat 1 26 0 601 279 249 13 chr2 39516010 39516404 -213740179 + L2 LINE L2 2811 3297 -16 769 132 0 0 chr2 39516407 39516513 -213740070 + U6 snRNA snRNA 1 106 -1 4555 159 4 12 chr2 39516514 39517264 -213739319 + L1PA16 LINE L1 5414 6157 -9 231 148 19 56 chr2 39517315 39517369 -213739214 + GA-rich Low_complexity Low_complexity 4 55 0 1050 144 19 30 chr2 39518793 39519033 -213737550 + LTR54 LTR ERV1 192 488 -22 4661 140 35 0 chr2 39519033 39519516 -213737067 - L1MA4A LINE L1 -12 6291 5773 315 0 0 0 chr2 39519516 39519551 -213737032 + (TG)n Simple_repeat Simple_repeat 2 36 0 4661 140 35 0 chr2 39519551 39519781 -213736802 - L1MA4A LINE L1 -530 5773 5553 4259 148 51 14 chr2 39519781 39520580 -213736003 + L1 LINE L1 4275 5103 -1043 367 111 0 32 chr2 39520580 39520643 -213735940 + LTR54 LTR ERV1 450 510 0 1755 251 101 10 chr2 39520739 39521257 -213735326 - MLT1G LTR MaLR -61 529 2 1898 270 200 32 chr2 39521566 39521596 -213734987 - L2 LINE L2 -3 3310 3286 3158 223 40 8 chr2 39521596 39522229 -213734354 - MER82 DNA MER2_type 0 653 1 1898 270 200 32 chr2 39522229 39523391 -213733192 - L2 LINE L2 -27 3286 1937 870 249 0 0 chr2 39523391 39523556 -213733027 + MER63A DNA MER1_type 41 205 -5 297 240 107 60 chr2 39524809 39524959 -213731624 - MIR SINE MIR -93 169 13 1821 191 39 56 chr2 39524989 39525455 -213731128 + MLT1C LTR MaLR 9 466 -1 3603 137 31 36 chr2 39526474 39527088 -213729495 + LTR36 LTR ERV1 1 611 0 2184 106 3 0 chr2 39530958 39531261 -213725322 + AluSg1 SINE Alu 1 304 -5 217 323 0 0 chr2 39531391 39531456 -213725127 + MIR3 SINE MIR 138 202 -6 180 316 153 0 chr2 39532500 39532598 -213723985 - L2 LINE L2 0 3272 3160 588 90 0 0 chr2 39532669 39532747 -213723836 - MADE1 DNA Mariner 0 80 3 2584 140 3 3 chr2 39533113 39533477 -213723106 + THE1B LTR MaLR 1 364 0 312 91 0 0 chr2 39533571 39533615 -213722968 + (TA)n Simple_repeat Simple_repeat 1 44 0 348 304 159 28 chr2 39533989 39534278 -213722305 + L2 LINE L2 2896 3222 -50 956 177 29 6 chr2 39534278 39534453 -213722130 + MER20 DNA MER1_type 20 198 -21 418 299 42 14 chr2 39534753 39534897 -213721686 - MIR3 SINE MIR -5 203 56 326 240 89 75 chr2 39535211 39535357 -213721226 - MER20B DNA MER1_type -620 163 16 385 293 140 19 chr2 39535468 39535625 -213720958 + MER5A DNA MER1_type 14 189 0 416 327 85 12 chr2 39535631 39535796 -213720787 - MER5B DNA MER1_type 0 178 2 706 188 104 0 chr2 39535875 39536029 -213720554 + MER5B DNA MER1_type 6 175 -3 1991 116 31 10 chr2 39536679 39536971 -213719612 + AluSg SINE Alu 1 298 -12 215 311 179 37 chr2 39537739 39537929 -213718654 - MIR SINE MIR -44 218 2 272 148 16 0 chr2 39538376 39538437 -213718146 + (TA)n Simple_repeat Simple_repeat 2 63 0 682 170 89 0 chr2 39538448 39538583 -213718000 - MLT2B2 LTR ERVL -41 474 328 370 218 59 0 chr2 39538599 39538700 -213717883 + MLT1K LTR MaLR 456 562 -26 292 323 66 24 chr2 39539891 39540057 -213716526 + MIR SINE MIR 23 187 -67 196 351 26 0 chr2 39540850 39540927 -213715656 + L3b LINE CR1 1383 1461 -122 1811 157 3 10 chr2 39541349 39541642 -213714941 - AluJb SINE Alu -21 291 1 538 245 48 65 chr2 39541680 39541990 -213714593 + L1MC5 LINE L1 7609 7913 -48 1777 133 83 0 chr2 39542065 39542343 -213714240 + AluSx SINE Alu 1 301 -11 21 36 0 0 chr2 39542408 39542436 -213714147 + AT_rich Low_complexity Low_complexity 1 28 0 3236 147 4 0 chr2 39543021 39543511 -213713072 + L1MA9 LINE L1 5818 6309 -3 560 253 149 0 chr2 39544483 39544657 -213711926 - MIR SINE MIR -55 207 8 236 406 30 10 chr2 39544819 39545021 -213711562 - L2 LINE L2 -884 2430 2225 647 203 42 0 chr2 39545289 39545407 -213711176 - FLAM_A SINE Alu -10 123 1 274 161 136 86 chr2 39546187 39546268 -213710315 - L2 LINE L2 -7 3306 3222 1061 219 148 26 chr2 39546496 39546875 -213709708 - L1ME3A LINE L1 -15 6155 5731 380 230 0 11 chr2 39546880 39546967 -213709616 + LTR67 LTR ERVL 472 557 0 2430 298 49 16 chr2 39547784 39548738 -213707845 + L2 LINE L2 1535 2520 -794 330 355 26 0 chr2 39548828 39548983 -213707600 - L1ME4a LINE L1 -270 5851 5693 408 242 17 42 chr2 39549931 39550051 -213706532 - L1ME4a LINE L1 -462 5659 5543 195 362 14 0 chr2 39550945 39551014 -213705569 + MIR SINE MIR 81 150 -112 296 318 144 12 chr2 39551664 39551837 -213704746 + MIR SINE MIR 65 260 -2 1696 170 17 3 chr2 39552396 39552690 -213703893 - AluJo SINE Alu -14 298 1 2366 118 36 36 chr2 39553235 39553599 -213702984 - THE1B LTR MaLR 0 364 1 2391 78 10 10 chr2 39555488 39555796 -213700787 - AluY SINE Alu -3 308 1 22 0 0 0 chr2 39556319 39556341 -213700242 + AT_rich Low_complexity Low_complexity 1 22 0 278 284 49 98 chr2 39558043 39558226 -213698357 - MIR3 SINE MIR -11 197 24 790 285 143 32 chr2 39558249 39558684 -213697899 - MLT1K LTR MaLR -6 582 100 2505 72 0 0 chr2 39558806 39559112 -213697471 - AluY SINE Alu -5 306 1 793 190 0 29 chr2 39559285 39559422 -213697161 + FLAM_A SINE Alu 1 133 0 277 271 23 23 chr2 39560267 39560396 -213696187 + GA-rich Low_complexity Low_complexity 2 130 0 1032 249 32 0 chr2 39560608 39560825 -213695758 - MER58A DNA MER1_type 0 224 1 1460 186 77 55 chr2 39561169 39561534 -213695049 - MLT1A2 LTR MaLR 0 374 2 3737 107 52 33 chr2 39563119 39563755 -213692828 - MER39B LTR ERV1 0 653 6 185 220 40 0 chr2 39563797 39563847 -213692736 + MIR SINE MIR 100 151 -111 190 300 20 0 chr2 39563908 39563958 -213692625 + L2 LINE L2 3210 3260 -12 190 154 92 46 chr2 39564040 39564105 -213692478 - MER5B DNA MER1_type -6 172 105 315 120 0 20 chr2 39564237 39564287 -213692296 + MLT1F LTR MaLR 494 542 0 2362 110 0 0 chr2 39564468 39564778 -213691805 + AluSx SINE Alu 1 310 -2 318 296 133 20 chr2 39565275 39565478 -213691105 - L1MC4 LINE L1 -1036 7006 6781 624 76 0 0 chr2 39565888 39565967 -213690616 - AluSp SINE Alu -9 304 226 1360 102 6 0 chr2 39565967 39566144 -213690439 - AluSp SINE Alu -126 187 10 489 266 18 0 chr2 39566196 39566305 -213690278 + MER81 DNA DNA 1 111 -3 496 233 35 105 chr2 39566896 39567068 -213689515 - MIR3 SINE MIR -14 194 35 304 397 90 0 chr2 39567403 39567559 -213689024 + L2 LINE L2 2893 3062 -251 499 217 99 50 chr2 39567598 39567759 -213688824 + MLT1C LTR MaLR 1 169 -298 253 316 31 67 chr2 39567819 39568012 -213688571 + L2 LINE L2 2868 3053 -219 279 0 0 0 chr2 39568069 39568100 -213688483 + (TG)n Simple_repeat Simple_repeat 2 32 0 186 302 0 0 chr2 39568107 39568150 -213688433 + L2 LINE L2 3144 3186 -86 246 192 0 0 chr2 39568683 39568735 -213687848 + (CA)n Simple_repeat Simple_repeat 2 53 0 254 239 56 14 chr2 39569970 39570041 -213686542 + MIR SINE MIR 63 136 -72 589 66 22 0 chr2 39570111 39570202 -213686381 + (TAGA)n Simple_repeat Simple_repeat 3 95 0 193 313 16 0 chr2 39570669 39570733 -213685850 + L2 LINE L2 3198 3262 -10 270 136 0 0 chr2 39570738 39570782 -213685801 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 261 211 0 0 chr2 39573161 39573213 -213683370 - MLT1G LTR MaLR 0 590 539 2130 214 108 22 chr2 39573289 39573788 -213682795 - MLT1F LTR MaLR 0 542 1 3025 211 73 90 chr2 39574558 39575627 -213680956 + L1ME1 LINE L1 4492 5564 -602 2437 107 52 19 chr2 39575627 39575990 -213680593 + THE1C LTR MaLR 1 375 0 3025 211 73 90 chr2 39575990 39576323 -213680260 + L1ME1 LINE L1 5564 5901 -265 2085 215 30 21 chr2 39576328 39576509 -213680074 + L1ME3A LINE L1 5625 5803 -367 2408 145 0 23 chr2 39576509 39576854 -213679729 + MER1B DNA MER1_type 1 337 0 2085 215 30 21 chr2 39576854 39577207 -213679376 + L1ME3A LINE L1 5803 6164 -6 310 192 29 15 chr2 39577554 39577661 -213678922 + MIR SINE MIR 8 173 -89 456 283 136 74 chr2 39578300 39578816 -213677767 + L1ME4a LINE L1 5506 6053 -68 2245 60 4 0 chr2 39578841 39579107 -213677476 + L1PA7 LINE L1 5877 6143 -11 9034 203 138 30 chr2 39579136 39581524 -213675059 + L1MD1 LINE L1 3 2648 -3892 4367 178 8 27 chr2 39581529 39582175 -213674408 + L1MD1 LINE L1 5806 6434 -202 2208 86 62 0 chr2 39582175 39582465 -213674118 + AluSx SINE Alu 1 308 -4 4367 178 8 27 chr2 39582465 39582661 -213673922 + L1MD1 LINE L1 6434 6632 -4 3862 185 30 55 chr2 39584621 39585444 -213671139 - L1MB8 LINE L1 -1 6177 5375 561 349 11 38 chr2 39586117 39586378 -213670205 + MIR SINE MIR 9 262 0 306 333 53 57 chr2 39586409 39586673 -213669910 + L2 LINE L2 2918 3180 -92 267 245 157 113 chr2 39586762 39586966 -213669617 - MIR SINE MIR -8 254 42 690 129 29 0 chr2 39587055 39587194 -213669389 + CT-rich Low_complexity Low_complexity 3 145 0 553 204 35 14 chr2 39587200 39587342 -213669241 - MLT1A1 LTR MaLR -49 316 172 749 300 19 14 chr2 39588612 39588822 -213667761 - MLT1I LTR MaLR 0 409 199 4783 171 24 21 chr2 39588823 39589537 -213667046 + L1MB8 LINE L1 4963 5684 -494 2123 128 14 0 chr2 39589537 39589833 -213666750 + AluSx SINE Alu 6 305 -7 4783 171 24 21 chr2 39589833 39590330 -213666253 + L1MB8 LINE L1 5684 6178 0 2518 111 70 41 chr2 39591399 39591442 -213665141 - MSTA LTR MaLR -3 425 385 2322 94 3 0 chr2 39591442 39591740 -213664843 + AluSp SINE Alu 1 299 -14 2518 111 70 41 chr2 39591740 39592109 -213664474 - MSTA LTR MaLR -43 385 1 999 208 97 14 chr2 39592328 39592535 -213664048 - MER58A DNA MER1_type 0 224 1 3041 178 83 24 chr2 39592569 39593217 -213663366 - Tigger7 DNA MER2_type 0 2587 1 187 307 13 53 chr2 39593443 39593518 -213663065 + L2 LINE L2 3200 3271 -1 4308 217 80 30 chr2 39593533 39595823 -213660760 + L1MC2 LINE L1 3 2809 -4132 * 5960 225 28 74 chr2 39595801 39597041 -213659542 + L1MC2 LINE L1 3792 4902 -2039 204 67 0 0 chr2 39597041 39597071 -213659512 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5960 225 28 74 chr2 39597071 39597880 -213658703 + L1MC2 LINE L1 4902 5747 -1194 727 86 36 14 chr2 39597880 39598019 -213658564 + GA-rich Low_complexity Low_complexity 2 143 0 4790 166 40 52 chr2 39598021 39598469 -213658114 + L1MC2 LINE L1 6124 6576 -563 2114 100 18 0 chr2 39598469 39598769 -213657814 + AluSp SINE Alu 1 305 0 4790 166 40 52 chr2 39598769 39599348 -213657235 + L1MC2 LINE L1 6576 7139 0 199 229 115 16 chr2 39599407 39599468 -213657115 - MIR3 SINE MIR 0 208 142 190 383 64 0 chr2 39599457 39599551 -213657032 - L2 LINE L2 -2 3270 3171 * 257 106 0 21 chr2 39599607 39599654 -213656929 + (GA)n Simple_repeat Simple_repeat 1 46 0 248 154 19 0 chr2 39600285 39600337 -213656246 + CT-rich Low_complexity Low_complexity 4 56 0 380 229 31 42 chr2 39600441 39600537 -213656046 + L2 LINE L2 3178 3272 0 224 79 53 0 chr2 39601376 39601414 -213655169 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5321 110 29 6 chr2 39603519 39604457 -213652126 + L1PB2 LINE L1 5176 6167 -1 280 291 23 23 chr2 39604460 39604546 -213652037 - MIR SINE MIR -156 106 21 716 151 0 0 chr2 39605146 39605252 -213651331 - FLAM_C SINE Alu -36 107 2 901 302 78 25 chr2 39605256 39606043 -213650540 + L1ME3A LINE L1 4640 5496 -666 1848 155 0 34 chr2 39606049 39606270 -213650313 + AluJb SINE Alu 1 209 -103 2271 194 80 15 chr2 39606270 39606745 -213649838 + LTR22 LTR ERVK 1 506 -3 1848 155 0 34 chr2 39606745 39606845 -213649738 + AluJb SINE Alu 209 311 -1 604 246 81 104 chr2 39606846 39607289 -213649294 + L1ME3A LINE L1 5499 5931 -239 2065 123 0 0 chr2 39607588 39607920 -213648663 + AluSx SINE Alu 1 332 0 201 171 0 0 chr2 39607943 39607978 -213648605 + A-rich Low_complexity Low_complexity 1 35 0 332 268 120 14 chr2 39608053 39608195 -213648388 - MIR3 SINE MIR -12 196 40 206 319 29 0 chr2 39608265 39608334 -213648249 + L2 LINE L2 3187 3257 -15 628 201 69 83 chr2 39610634 39610838 -213645745 - MIR SINE MIR -13 249 49 247 350 57 14 chr2 39611063 39611203 -213645380 - L2 LINE L2 -222 3050 2905 627 222 56 44 chr2 39611257 39611437 -213645146 + MLT1J LTR MaLR 5 186 -325 263 278 67 0 chr2 39611553 39611643 -213644940 + MLT1J LTR MaLR 379 474 -37 1132 234 77 15 chr2 39612772 39612943 -213643640 - MER20B DNA MER1_type -430 353 194 2254 131 0 0 chr2 39612943 39613249 -213643334 + AluSx SINE Alu 1 306 -6 1132 234 77 15 chr2 39613249 39613402 -213643181 - MER20B DNA MER1_type -589 194 9 1427 208 134 11 chr2 39614138 39614503 -213642080 + MER66A LTR ERV1 29 438 -40 282 235 50 0 chr2 39614795 39614914 -213641669 + (TCTCTG)n Simple_repeat Simple_repeat 2 126 0 1052 288 28 6 chr2 39615192 39615515 -213641068 + LTR16A LTR ERVL 121 450 0 505 281 27 86 chr2 39615518 39615667 -213640916 + HERV16 LTR ERVL 4 133 -4863 1961 144 34 0 chr2 39615667 39615959 -213640624 - AluJo SINE Alu -10 302 1 505 281 27 86 chr2 39615959 39616065 -213640518 + HERV16 LTR ERVL 133 244 -4752 4349 285 57 29 chr2 39616352 39617268 -213639315 + HERV16 LTR ERVL 1607 2579 -2417 1932 200 100 32 chr2 39617268 39617738 -213638845 - MLT1D LTR MaLR 0 505 4 4349 285 57 29 chr2 39617738 39618265 -213638318 + HERV16 LTR ERVL 2579 3090 -1906 1177 183 14 0 chr2 39618452 39618665 -213637918 + AluJo SINE Alu 91 306 -6 3919 307 52 42 chr2 39618670 39620635 -213635948 + HERV16 LTR ERVL 3341 5326 -438 730 331 74 11 chr2 39620962 39621246 -213635337 + LTR16A LTR ERVL 143 444 -6 189 0 0 0 chr2 39621266 39621287 -213635296 + (A)n Simple_repeat Simple_repeat 1 21 0 1190 187 58 4 chr2 39621963 39622188 -213634395 + MER8 DNA MER2_type 2 238 -1 2373 98 0 9 chr2 39622224 39622539 -213634044 - AluSx SINE Alu 0 312 1 1267 195 71 62 chr2 39623178 39623613 -213632970 - LTR27 LTR ERV1 -2 634 208 822 185 11 34 chr2 39623595 39623773 -213632810 - LTR28 LTR ERV1 -842 178 5 * 1834 193 0 0 chr2 39623846 39624157 -213632426 - AluJb SINE Alu 0 312 2 1181 266 81 35 chr2 39624189 39624240 -213632343 - HAL1b LINE L1 -416 932 885 1135 203 32 9 chr2 39624240 39624457 -213632126 - MER58A DNA MER1_type -2 222 1 1181 266 81 35 chr2 39624457 39624861 -213631722 - HAL1b LINE L1 -463 885 446 2323 106 3 0 chr2 39624861 39625163 -213631420 - AluSx SINE Alu -9 303 1 1181 266 81 35 chr2 39625163 39625250 -213631333 - HAL1b LINE L1 -902 446 364 365 319 54 43 chr2 39625545 39625824 -213630759 - HAL1b LINE L1 -1008 340 59 1809 150 26 23 chr2 39626409 39626523 -213630060 - AluJb SINE Alu -4 308 196 2370 94 7 0 chr2 39626523 39626822 -213629761 + AluSx SINE Alu 2 302 -10 372 22 0 0 chr2 39626822 39626867 -213629716 + (GA)n Simple_repeat Simple_repeat 2 46 0 1809 150 26 23 chr2 39626867 39627058 -213629525 - AluJb SINE Alu -115 197 1 5531 118 41 14 chr2 39627066 39627935 -213628648 - L1MC1 LINE L1 0 6333 5438 2104 140 3 3 chr2 39627935 39628242 -213628341 - AluSq SINE Alu -6 307 1 5531 118 41 14 chr2 39628242 39628257 -213628326 - L1MC1 LINE L1 -895 5438 5425 2491 193 87 19 chr2 39628442 39628553 -213628030 + MER45B DNA AcHobo 466 568 -1013 1687 178 10 23 chr2 39628553 39628862 -213627721 - AluJo SINE Alu -7 305 1 2491 193 87 19 chr2 39628862 39629288 -213627295 + MER45B DNA AcHobo 568 1040 0 305 267 67 0 chr2 39629288 39629378 -213627205 - MIR3 SINE MIR -12 196 101 249 196 0 0 chr2 39630133 39630184 -213626399 + (CA)n Simple_repeat Simple_repeat 1 51 0 1119 134 2 3 chr2 39630395 39630899 -213625684 - ALR/Alpha Satellite centromeric 0 503 1 21 0 0 0 chr2 39630939 39630960 -213625623 + AT_rich Low_complexity Low_complexity 1 21 0 989 172 13 16 chr2 39630997 39631219 -213625364 - ALR/Alpha Satellite centromeric 0 221 1 1056 192 1 4 chr2 39631414 39632437 -213624146 - ALR/Alpha Satellite centromeric 0 1020 1 994 131 11 26 chr2 39632452 39632773 -213623810 - ALR/Alpha Satellite centromeric -20 316 1 1078 172 3 17 chr2 39632878 39635589 -213620994 + ALR/Alpha Satellite centromeric 1 2674 -64 1094 167 1 3 chr2 39635801 39637061 -213619522 + ALR/Alpha Satellite centromeric 1 1257 -23 6129 57 3 5 chr2 39637064 39637836 -213618747 - L1PA3 LINE L1 -11 6144 5375 3169 16 0 0 chr2 39637834 39638202 -213618381 + L1PA3 LINE L1 4985 5352 -794 * 585 137 65 105 chr2 39638204 39638357 -213618226 - L1ME LINE L1 -607 5559 5413 21 0 0 0 chr2 39638362 39638383 -213618200 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39638406 39638435 -213618148 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39638478 39638557 -213618026 - MER112 DNA MER1_type -178 82 1 2043 128 45 0 chr2 39638652 39638942 -213617641 + AluSg SINE Alu 1 303 -7 347 103 0 17 chr2 39639453 39639511 -213617072 + (CA)n Simple_repeat Simple_repeat 1 57 0 437 243 27 9 chr2 39639556 39639667 -213616916 + L2 LINE L2 3188 3300 -13 1933 221 105 10 chr2 39639976 39640470 -213616113 - L1MD2 LINE L1 -226 6133 5593 * 6691 33 0 0 chr2 39640464 39641242 -213615341 - L1PA4 LINE L1 -3 6152 5375 3169 16 0 0 chr2 39641240 39641608 -213614975 + L1PA4 LINE L1 4985 5352 -794 * 585 137 65 105 chr2 39641610 39641763 -213614820 - L1MD2 LINE L1 -607 5559 5413 21 0 0 0 chr2 39641768 39641789 -213614794 + AT_rich Low_complexity Low_complexity 1 21 0 207 69 0 0 chr2 39641812 39641841 -213614742 + (TG)n Simple_repeat Simple_repeat 2 30 0 247 266 51 13 chr2 39641884 39641963 -213614620 - MER112 DNA MER1_type -178 82 1 2043 128 45 0 chr2 39642059 39642349 -213614234 + AluSg SINE Alu 1 303 -7 362 339 58 18 chr2 39642668 39642998 -213613585 + L1ME LINE L1 5469 5811 -351 21 0 0 0 chr2 39643204 39643225 -213613358 + AT_rich Low_complexity Low_complexity 1 21 0 1232 194 34 23 chr2 39649449 39649712 -213606871 - ORSL DNA AcHobo -1 274 9 653 203 0 0 chr2 39650080 39650198 -213606385 + FLAM_A SINE Alu 1 118 -15 35 0 0 0 chr2 39650204 39650239 -213606344 + AT_rich Low_complexity Low_complexity 1 35 0 740 164 20 108 chr2 39650495 39650690 -213605893 - MER58A DNA MER1_type 0 224 47 365 181 42 0 chr2 39651264 39651336 -213605247 + MER53 DNA DNA 15 89 -100 365 228 0 0 chr2 39651273 39651352 -213605231 - MER53 DNA DNA -16 173 95 22 0 0 0 chr2 39652356 39652378 -213604205 + GC_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr2 39654056 39654088 -213602495 + GC_rich Low_complexity Low_complexity 1 32 0 414 296 16 0 chr2 39655429 39655554 -213601029 - MIR SINE MIR -104 158 32 2205 93 6 37 chr2 39655645 39655967 -213600616 + AluSx SINE Alu 1 312 0 2270 89 30 7 chr2 39656251 39656554 -213600029 - AluSx SINE Alu -2 310 1 591 143 71 29 chr2 39658479 39658619 -213597964 - MER104 DNA Tc2 -3 177 32 2611 82 123 2 chr2 39658659 39659059 -213597524 - LTR7 LTR ERV1 -2 448 1 2413 95 50 13 chr2 39659059 39659437 -213597146 - HERVH LTR ERV1 0 7713 7322 1388 128 18 9 chr2 39659435 39659653 -213596930 - HERVH LTR ERV1 -1894 5819 5600 * 4538 136 1 1 chr2 39659654 39660316 -213596267 - HERVH LTR ERV1 -2564 5149 4488 1383 70 0 5 chr2 39660318 39660503 -213596080 - HERVH LTR ERV1 -3720 3993 3810 2337 97 0 0 chr2 39710546 39710844 -213545739 - AluSq SINE Alu -15 298 1 2269 83 10 0 chr2 39710853 39711143 -213545440 - AluY SINE Alu -16 295 3 2474 66 3 7 chr2 39711159 39711463 -213545120 - AluSp SINE Alu -10 303 1 302 270 115 71 chr2 39711675 39711721 -213544862 + L1MC/D LINE L1 5319 5362 -2446 844 163 16 0 chr2 39711721 39711850 -213544733 + FLAM_C SINE Alu 2 132 -1 302 270 115 71 chr2 39711850 39712055 -213544528 + L1MC/D LINE L1 5362 5581 -2227 2035 123 27 3 chr2 39712079 39712372 -213544211 + AluSx SINE Alu 1 300 -12 5321 110 29 6 chr2 39714434 39715372 -213541211 + L1PB2 LINE L1 5176 6167 -1 280 291 23 23 chr2 39715375 39715461 -213541122 - MIR SINE MIR -156 106 21 677 151 0 0 chr2 39716061 39716167 -213540416 - FLAM_C SINE Alu -36 107 2 935 304 36 20 chr2 39716230 39716734 -213539849 + L1ME3A LINE L1 4730 5241 -905 397 306 38 13 chr2 39716801 39716958 -213539625 + L1ME3A LINE L1 5336 5496 -666 1873 156 0 28 chr2 39716964 39717185 -213539398 + AluJb SINE Alu 1 212 -100 2135 182 67 36 chr2 39717185 39717662 -213538921 + LTR22B LTR ERVK 1 492 0 1873 156 0 28 chr2 39717662 39717760 -213538823 + AluJb SINE Alu 212 311 -1 574 246 81 104 chr2 39717761 39718204 -213538379 + L1ME3A LINE L1 5499 5931 -239 2092 123 0 0 chr2 39718503 39718835 -213537748 + AluSx SINE Alu 1 332 0 201 171 0 0 chr2 39718858 39718893 -213537690 + A-rich Low_complexity Low_complexity 1 35 0 290 275 120 14 chr2 39718968 39719110 -213537473 - MIR3 SINE MIR -12 196 40 184 319 29 0 chr2 39719180 39719249 -213537334 + L2 LINE L2 3187 3257 -15 567 201 69 83 chr2 39721548 39721752 -213534831 - MIR SINE MIR -13 249 49 229 364 10 0 chr2 39721977 39722076 -213534507 - L2 LINE L2 -222 3050 2951 633 222 56 44 chr2 39722171 39722351 -213534232 + MLT1J LTR MaLR 5 186 -325 262 256 78 11 chr2 39722467 39722557 -213534026 + MLT1J LTR MaLR 379 474 -37 1126 234 77 15 chr2 39723686 39723857 -213532726 - MER20B DNA MER1_type -430 353 194 2272 131 0 0 chr2 39723857 39724163 -213532420 + AluSx SINE Alu 1 306 -6 1126 234 77 15 chr2 39724163 39724316 -213532267 - MER20B DNA MER1_type -589 194 9 1427 208 134 11 chr2 39725052 39725417 -213531166 + MER66A LTR ERV1 29 438 -40 282 235 50 0 chr2 39725709 39725828 -213530755 + (TCTCTG)n Simple_repeat Simple_repeat 2 126 0 1052 288 28 6 chr2 39726106 39726429 -213530154 + LTR16A LTR ERVL 121 450 0 505 281 27 86 chr2 39726432 39726581 -213530002 + HERV16 LTR ERVL 4 133 -4863 1961 144 34 0 chr2 39726581 39726873 -213529710 - AluJo SINE Alu -10 302 1 505 281 27 86 chr2 39726873 39726979 -213529604 + HERV16 LTR ERVL 133 244 -4752 4349 285 57 29 chr2 39727266 39728182 -213528401 + HERV16 LTR ERVL 1607 2579 -2417 1932 200 100 32 chr2 39728182 39728652 -213527931 - MLT1D LTR MaLR 0 505 4 4349 285 57 29 chr2 39728652 39729179 -213527404 + HERV16 LTR ERVL 2579 3090 -1906 1177 183 14 0 chr2 39729366 39729579 -213527004 + AluJo SINE Alu 91 306 -6 3919 307 52 42 chr2 39729584 39731549 -213525034 + HERV16 LTR ERVL 3341 5326 -438 730 331 74 11 chr2 39731876 39732160 -213524423 + LTR16A LTR ERVL 143 444 -6 189 0 0 0 chr2 39732180 39732201 -213524382 + (A)n Simple_repeat Simple_repeat 1 21 0 1190 187 58 4 chr2 39732877 39733102 -213523481 + MER8 DNA MER2_type 2 238 -1 2373 98 0 9 chr2 39733138 39733453 -213523130 - AluSx SINE Alu 0 312 1 1267 195 71 62 chr2 39734092 39734527 -213522056 - LTR27 LTR ERV1 -2 634 208 822 185 11 34 chr2 39734509 39734687 -213521896 - LTR28 LTR ERV1 -842 178 5 * 1834 193 0 0 chr2 39734760 39735071 -213521512 - AluJb SINE Alu 0 312 2 1181 266 81 35 chr2 39735103 39735154 -213521429 - HAL1b LINE L1 -416 932 885 1135 203 32 9 chr2 39735154 39735371 -213521212 - MER58A DNA MER1_type -2 222 1 1181 266 81 35 chr2 39735371 39735775 -213520808 - HAL1b LINE L1 -463 885 446 2323 106 3 0 chr2 39735775 39736077 -213520506 - AluSx SINE Alu -9 303 1 1181 266 81 35 chr2 39736077 39736164 -213520419 - HAL1b LINE L1 -902 446 364 365 319 54 43 chr2 39736459 39736738 -213519845 - HAL1b LINE L1 -1008 340 59 1809 150 26 23 chr2 39737323 39737437 -213519146 - AluJb SINE Alu -4 308 196 2370 94 7 0 chr2 39737437 39737736 -213518847 + AluSx SINE Alu 2 302 -10 372 22 0 0 chr2 39737736 39737781 -213518802 + (GA)n Simple_repeat Simple_repeat 2 46 0 1809 150 26 23 chr2 39737781 39737972 -213518611 - AluJb SINE Alu -115 197 1 5531 118 41 14 chr2 39737980 39738849 -213517734 - L1MC1 LINE L1 0 6333 5438 2104 140 3 3 chr2 39738849 39739156 -213517427 - AluSq SINE Alu -6 307 1 5531 118 41 14 chr2 39739156 39739171 -213517412 - L1MC1 LINE L1 -895 5438 5425 2491 193 87 19 chr2 39739356 39739467 -213517116 + MER45B DNA AcHobo 466 568 -1013 1687 178 10 23 chr2 39739467 39739776 -213516807 - AluJo SINE Alu -7 305 1 2491 193 87 19 chr2 39739776 39740202 -213516381 + MER45B DNA AcHobo 568 1040 0 305 267 67 0 chr2 39740202 39740292 -213516291 - MIR3 SINE MIR -12 196 101 249 196 0 0 chr2 39741047 39741098 -213515485 + (CA)n Simple_repeat Simple_repeat 1 51 0 190 312 48 56 chr2 39741813 39741938 -213514645 + L2 LINE L2 3179 3302 -11 513 291 71 71 chr2 39743099 39743137 -213513446 - MLT1K LTR MaLR -3 585 548 2784 127 24 0 chr2 39743137 39743555 -213513028 - MSTA LTR MaLR 0 428 1 513 291 71 71 chr2 39743555 39743938 -213512645 - MLT1K LTR MaLR -39 549 164 2692 160 27 0 chr2 39745465 39745914 -213510669 - L1MD3 LINE L1 -1 7994 7534 2198 129 46 0 chr2 39746295 39746643 -213509940 - THE1B LTR MaLR 0 364 1 363 280 64 8 chr2 39747424 39747549 -213509034 + MIR3 SINE MIR 14 145 -63 419 286 49 35 chr2 39749291 39749540 -213507043 - MIR SINE MIR -6 256 3 1854 132 68 7 chr2 39749710 39749990 -213506593 - AluSx SINE Alu -11 301 5 370 286 116 68 chr2 39749990 39750884 -213505699 - L1M4 LINE L1 -1130 5016 4036 2165 122 0 0 chr2 39750884 39751172 -213505411 + AluSx SINE Alu 5 292 -20 370 286 116 68 chr2 39751172 39751606 -213504977 - L1M4 LINE L1 -2110 4036 3624 1826 239 49 18 chr2 39751648 39752099 -213504484 - LTR40a LTR ERVL -53 466 2 1969 93 3 96 chr2 39752220 39752382 -213504201 + AluSp SINE Alu 1 120 -193 2442 74 0 0 chr2 39752382 39752678 -213503905 + AluY SINE Alu 2 297 -14 1969 93 3 96 chr2 39752678 39752837 -213503746 + AluSp SINE Alu 120 292 -21 201 39 0 0 chr2 39753128 39753154 -213503429 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 279 0 0 0 chr2 39753153 39753184 -213503399 + (CA)n Simple_repeat Simple_repeat 1 31 0 306 0 0 0 chr2 39753874 39753908 -213502675 + (CA)n Simple_repeat Simple_repeat 2 35 0 2002 104 77 11 chr2 39754170 39754457 -213502126 + AluSx SINE Alu 1 306 -6 442 295 49 0 chr2 39754787 39754909 -213501674 + L2 LINE L2 3143 3270 -2 15322 130 19 11 chr2 39755437 39756683 -213499900 - Tigger1 DNA MER2_type 0 2418 1183 2076 104 20 17 chr2 39756683 39756980 -213499603 - AluSx SINE Alu -14 298 1 15322 130 19 11 chr2 39756980 39757690 -213498893 - Tigger1 DNA MER2_type -1235 1183 437 6479 122 9 17 chr2 39757690 39758667 -213497916 + LTR5 LTR ERVK 1 969 0 15322 130 19 11 chr2 39758667 39759108 -213497475 - Tigger1 DNA MER2_type -1981 437 1 731 182 78 0 chr2 39759456 39759610 -213496973 - FRAM SINE Alu 0 166 1 2041 304 82 49 chr2 39760044 39760267 -213496316 + ERVL LTR ERVL 4112 4326 -1438 2255 96 3 13 chr2 39760267 39760569 -213496014 + AluSx SINE Alu 1 299 -13 2041 304 82 49 chr2 39760569 39760720 -213495863 + ERVL LTR ERVL 4326 4471 -1293 2281 99 0 7 chr2 39760720 39761023 -213495560 - AluSq SINE Alu -12 301 1 2041 304 82 49 chr2 39761023 39761813 -213494770 + ERVL LTR ERVL 4471 5315 -449 2292 99 0 13 chr2 39762363 39762665 -213493918 + AluSx SINE Alu 1 298 -14 222 286 0 0 chr2 39762973 39763036 -213493547 + MIR SINE MIR 79 141 -67 924 304 106 15 chr2 39763124 39763842 -213492741 + L2 LINE L2 2528 3313 0 242 93 0 23 chr2 39763957 39764000 -213492583 + (TGAA)n Simple_repeat Simple_repeat 2 43 0 189 107 0 0 chr2 39764018 39764046 -213492537 + (CTA)n Simple_repeat Simple_repeat 2 29 0 944 191 141 37 chr2 39764497 39764795 -213491788 + L1MC5 LINE L1 7585 7913 -48 1892 123 84 46 chr2 39764825 39765192 -213491391 - MER4B LTR ERV1 -229 381 1 1267 313 150 32 chr2 39766524 39767410 -213489173 - L2 LINE L2 -2106 1208 218 527 230 53 9 chr2 39767416 39767529 -213489054 + MER5B DNA MER1_type 2 119 -59 1556 156 75 19 chr2 39767558 39767879 -213488704 + MER2 DNA MER2_type 1 339 -6 292 253 11 11 chr2 39768168 39768263 -213488320 + LTR37B LTR ERV1 8 102 -366 1654 137 127 67 chr2 39768369 39768785 -213487798 + L1MA9 LINE L1 5789 6229 -83 338 171 298 25 chr2 39768810 39768968 -213487615 + Charlie1 DNA MER1_type 2561 2761 0 418 231 59 21 chr2 39769014 39769200 -213487383 + LTR37B LTR ERV1 276 468 0 208 281 115 58 chr2 39769694 39769767 -213486816 + MER5A DNA MER1_type 18 85 -104 1088 74 0 7 chr2 39769767 39769916 -213486667 + L1PA5 LINE L1 6004 6151 -3 208 281 115 58 chr2 39769916 39769981 -213486602 + MER5A DNA MER1_type 85 164 -25 512 195 150 0 chr2 39769997 39770110 -213486473 + FLAM_A SINE Alu 1 130 -3 337 247 135 23 chr2 39770419 39770586 -213485997 + MIR SINE MIR 2 181 -61 2303 120 0 0 chr2 39770820 39771120 -213485463 + AluSx SINE Alu 1 300 -12 342 301 79 22 chr2 39771654 39771822 -213484761 - MIR SINE MIR -63 145 13 1730 159 58 28 chr2 39772251 39772615 -213483968 - THE1C LTR MaLR 0 375 1 2207 103 0 0 chr2 39774173 39774473 -213482110 + AluY SINE Alu 1 300 -11 231 287 0 20 chr2 39776045 39776146 -213480437 + A-rich Low_complexity Low_complexity 4 102 0 47 0 0 0 chr2 39779075 39779122 -213477461 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr2 39780308 39780329 -213476254 + AT_rich Low_complexity Low_complexity 1 21 0 978 198 0 6 chr2 39780556 39780723 -213475860 - FRAM SINE Alu -11 165 1 2255 107 3 0 chr2 39780878 39781176 -213475407 - AluSp SINE Alu -14 299 1 7386 164 166 63 chr2 39781215 39782218 -213474365 + L1MA3 LINE L1 13 911 -6654 473 130 0 0 chr2 39782218 39782287 -213474296 + AluS SINE Alu 1 69 -244 7386 164 166 63 chr2 39782287 39783111 -213473472 + L1MA3 LINE L1 911 1649 -5916 1953 136 49 0 chr2 39783111 39783398 -213473185 - AluJb SINE Alu -11 301 1 7386 164 166 63 chr2 39783398 39783756 -213472827 + L1MA3 LINE L1 1649 1969 -5596 1081 212 14 0 chr2 39783756 39783973 -213472610 + AluJo SINE Alu 1 220 -92 7386 164 166 63 chr2 39783973 39785153 -213471430 + L1MA3 LINE L1 1969 3026 -4539 2054 112 0 62 chr2 39785153 39785474 -213471109 + AluSx SINE Alu 1 301 -11 7386 164 166 63 chr2 39785474 39786487 -213470096 + L1MA3 LINE L1 3026 3933 -3632 210 71 0 0 chr2 39786487 39786515 -213470068 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 7386 164 166 63 chr2 39786515 39786794 -213469789 + L1MA3 LINE L1 3933 5549 -2016 902 143 12 0 chr2 39786813 39786981 -213469602 + L1MA3 LINE L1 6304 6473 -1092 1364 109 0 0 chr2 39786982 39787156 -213469427 + AluSq SINE Alu 1 174 -139 243 133 0 0 chr2 39787255 39787300 -213469283 - Alu SINE Alu 0 300 256 762 143 0 8 chr2 39787300 39787426 -213469157 + AluSg/x SINE Alu 179 303 -9 6225 117 31 21 chr2 39787426 39788662 -213467921 + L1MA3 LINE L1 6468 7724 0 22 0 0 0 chr2 39788669 39788691 -213467892 + AT_rich Low_complexity Low_complexity 1 22 0 2437 67 37 0 chr2 39790536 39790833 -213465750 - AluSp SINE Alu -5 308 1 189 74 0 0 chr2 39791010 39791037 -213465546 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1193 186 174 22 chr2 39791331 39791734 -213464849 + L1ME3A LINE L1 5707 6170 0 1847 126 133 36 chr2 39792113 39792335 -213464248 + MSTA LTR MaLR 1 200 -228 2269 77 13 7 chr2 39792335 39792635 -213463948 + AluSg SINE Alu 1 302 -8 1847 126 133 36 chr2 39792635 39792802 -213463781 + MSTA LTR MaLR 200 428 0 905 202 5 30 chr2 39793606 39793809 -213462774 - MER20 DNA MER1_type -15 204 7 2106 121 3 10 chr2 39794878 39795183 -213461400 + AluSq SINE Alu 4 306 -7 311 290 0 0 chr2 39796337 39796406 -213460177 + L2 LINE L2 3204 3272 0 209 269 27 121 chr2 39796530 39796679 -213459904 - MIR SINE MIR -42 220 86 808 174 65 13 chr2 39797926 39798081 -213458502 + FAM SINE Alu 10 172 -13 2129 73 49 7 chr2 39798103 39798390 -213458193 + AluSq SINE Alu 2 300 -13 1976 167 0 0 chr2 39799223 39799522 -213457061 + AluJb SINE Alu 1 299 -13 192 40 0 0 chr2 39799522 39799547 -213457036 + (GA)n Simple_repeat Simple_repeat 2 26 0 2198 106 7 0 chr2 39799732 39800033 -213456550 + AluSq SINE Alu 1 303 -10 455 231 148 18 chr2 39800175 39800404 -213456179 + L1MC5 LINE L1 7659 7917 -44 207 0 0 0 chr2 39800739 39800762 -213455821 + (CAAAAA)n Simple_repeat Simple_repeat 1 23 0 1767 94 16 101 chr2 39800769 39801100 -213455483 + AluSx SINE Alu 1 305 0 1555 148 0 0 chr2 39801607 39801836 -213454747 - AluJb SINE Alu 0 312 84 393 307 73 7 chr2 39802195 39802332 -213454251 + L2 LINE L2 3167 3312 -1 879 176 7 14 chr2 39802639 39802787 -213453796 + FRAM SINE Alu 1 146 -30 493 193 123 9 chr2 39802908 39803022 -213453561 - L2 LINE L2 -2 3311 3185 870 97 7 83 chr2 39803266 39803410 -213453173 - FLAM_C SINE Alu 0 133 1 581 128 23 0 chr2 39803638 39803724 -213452859 - FRAM SINE Alu -31 145 58 2298 75 3 7 chr2 39803901 39804193 -213452390 + AluSp SINE Alu 1 291 -22 1981 118 28 9 chr2 39804655 39804978 -213451605 + L1MB3 LINE L1 5855 6183 0 2566 238 50 69 chr2 39805081 39805516 -213451067 + L1MCb LINE L1 4 446 -5599 1023 86 0 0 chr2 39805516 39805668 -213450915 + (CA)n Simple_repeat Simple_repeat 2 153 0 2566 238 50 69 chr2 39805668 39805881 -213450702 + L1MCb LINE L1 446 662 -5383 545 196 161 0 chr2 39805881 39805993 -213450590 + FLAM_A SINE Alu 1 130 -3 2566 238 50 69 chr2 39805993 39806423 -213450160 + L1MCb LINE L1 662 1062 -4983 967 161 333 32 chr2 39806423 39806612 -213449971 + L1MCb LINE L1 1498 1629 -4935 2120 135 0 0 chr2 39806612 39806916 -213449667 + AluSx SINE Alu 1 304 -8 967 161 333 32 chr2 39806916 39807168 -213449415 + L1MCb LINE L1 1629 2072 -4492 6499 242 71 32 chr2 39807181 39807563 -213449020 + L1MCb LINE L1 2195 2561 -4003 2033 128 10 0 chr2 39807563 39807853 -213448730 + AluSx SINE Alu 1 293 -19 6499 242 71 32 chr2 39807853 39809051 -213447532 + L1MCb LINE L1 2561 3711 -2853 2255 104 16 3 chr2 39809051 39809358 -213447225 + AluSx SINE Alu 1 311 -1 6499 242 71 32 chr2 39809358 39809753 -213446830 + L1MCb LINE L1 3711 4089 -2475 2262 114 7 0 chr2 39809753 39810059 -213446524 + AluSx SINE Alu 1 308 -4 6499 242 71 32 chr2 39810059 39810927 -213445656 + L1MCb LINE L1 4089 5209 -1355 1973 112 23 33 chr2 39810927 39811059 -213445524 + AluSx SINE Alu 1 133 -179 2313 104 0 10 chr2 39811059 39811367 -213445216 + AluSc SINE Alu 1 305 -4 1973 112 23 33 chr2 39811367 39811538 -213445045 + AluSx SINE Alu 133 301 -11 6499 242 71 32 chr2 39811538 39811731 -213444852 + L1MCb LINE L1 5209 5393 -1171 1939 166 72 41 chr2 39811749 39812120 -213444463 + L1MB8 LINE L1 5649 6049 -129 1830 158 10 0 chr2 39812120 39812412 -213444171 - AluJo SINE Alu -17 295 1 1939 166 72 41 chr2 39812412 39812544 -213444039 + L1MB8 LINE L1 6049 6175 -3 714 194 0 14 chr2 39812815 39812959 -213443624 + FLAM_A SINE Alu 1 142 0 628 175 0 4 chr2 39812987 39813202 -213443381 + AluJo SINE Alu 1 289 -23 22 0 0 0 chr2 39813203 39813225 -213443358 + AT_rich Low_complexity Low_complexity 1 22 0 2166 130 0 0 chr2 39813935 39814236 -213442347 - AluSx SINE Alu -11 301 1 2248 72 14 0 chr2 39814326 39814628 -213441955 + AluSp SINE Alu 1 306 0 21 36 0 0 chr2 39814661 39814689 -213441894 + AT_rich Low_complexity Low_complexity 1 28 0 313 65 102 0 chr2 39814759 39814867 -213441716 + (TA)n Simple_repeat Simple_repeat 1 119 0 2043 228 53 30 chr2 39814963 39815657 -213440926 + L1ME3 LINE L1 5452 6161 -1 1730 106 94 0 chr2 39815666 39815962 -213440621 + AluY SINE Alu 1 311 0 318 318 185 33 chr2 39816550 39816761 -213439822 + MIR SINE MIR 10 252 -10 1489 203 112 58 chr2 39816761 39817109 -213439474 + L1MC5 LINE L1 7228 7556 -405 2293 121 0 3 chr2 39817109 39817422 -213439161 + AluSx SINE Alu 1 312 0 1489 203 112 58 chr2 39817422 39817744 -213438839 + L1MC5 LINE L1 7556 7934 -27 2204 136 23 0 chr2 39818026 39818372 -213438211 + L1PA16 LINE L1 5804 6157 -9 2144 228 77 49 chr2 39818394 39818852 -213437731 + L1MC3 LINE L1 6966 7455 -330 2117 94 7 4 chr2 39818852 39819129 -213437454 + AluSq SINE Alu 14 291 -22 2144 228 77 49 chr2 39819129 39819419 -213437164 + L1MC3 LINE L1 7455 7735 -50 1356 219 62 51 chr2 39819507 39819586 -213436997 + L1ME3 LINE L1 5725 5802 -360 2190 132 0 0 chr2 39819586 39819897 -213436686 - AluSq SINE Alu -2 311 1 1356 219 62 51 chr2 39819897 39820250 -213436333 + L1ME3 LINE L1 5802 6162 0 287 167 0 154 chr2 39820922 39821000 -213435583 - MER117 DNA MER1_type -130 67 2 1603 166 3 63 chr2 39821261 39821563 -213435020 + AluJb SINE Alu 1 284 -28 184 234 94 62 chr2 39822277 39822341 -213434242 - L2 LINE L2 -220 3093 3028 1271 130 13 59 chr2 39822845 39823083 -213433500 + AluJb SINE Alu 86 312 0 2513 122 40 8 chr2 39823608 39823961 -213432622 + THE1B LTR MaLR 1 364 0 2232 98 24 0 chr2 39824241 39824536 -213432047 + AluSx SINE Alu 1 302 -10 477 158 16 102 chr2 39825713 39825840 -213430743 + MIR SINE MIR 89 204 -58 362 305 119 70 chr2 39826162 39826394 -213430189 + L2 LINE L2 2621 2840 -432 2343 140 9 12 chr2 39826394 39826730 -213429853 - MER1B DNA MER1_type 0 337 3 362 305 119 70 chr2 39826730 39827018 -213429565 + L2 LINE L2 2840 3157 -115 889 312 33 68 chr2 39827072 39827633 -213428950 + L2 LINE L2 2772 3312 -1 2085 137 10 0 chr2 39827674 39827973 -213428610 - AluSx SINE Alu -10 302 1 2280 98 3 0 chr2 39828091 39828386 -213428197 + AluSp SINE Alu 1 296 -17 8136 29 1 0 chr2 39828557 39829592 -213426991 + L1PA3 LINE L1 5120 6155 0 1834 174 21 37 chr2 39830319 39830699 -213425884 + L1MC1 LINE L1 5958 6331 -2 21 36 0 0 chr2 39831375 39831403 -213425180 + AT_rich Low_complexity Low_complexity 1 28 0 2155 101 14 7 chr2 39831403 39831699 -213424884 - AluSq SINE Alu -15 298 1 200 61 61 0 chr2 39833133 39833166 -213423417 + CT-rich Low_complexity Low_complexity 2 36 0 2246 81 3 3 chr2 39834603 39834886 -213421697 + AluSp SINE Alu 1 283 -30 233 235 173 0 chr2 39835917 39835998 -213420585 + MIR SINE MIR 129 223 -39 1650 158 135 7 chr2 39836274 39836578 -213420005 + MER2 DNA MER2_type 1 343 -1 2246 117 3 0 chr2 39836871 39837179 -213419404 - AluSx SINE Alu -3 309 1 1541 207 27 3 chr2 39837270 39837569 -213419014 - AluJb SINE Alu -6 306 1 21 0 0 0 chr2 39837582 39837603 -213418980 + AT_rich Low_complexity Low_complexity 1 21 0 652 227 0 62 chr2 39837811 39837987 -213418596 - FRAM SINE Alu -1 165 1 1866 118 22 4 chr2 39838000 39838300 -213418283 - AluSx SINE Alu 0 311 7 2180 88 61 0 chr2 39838316 39838610 -213417973 - AluSx SINE Alu 0 312 1 2402 48 13 13 chr2 39838614 39838925 -213417658 - AluY SINE Alu 0 311 1 203 208 0 19 chr2 39839030 39839083 -213417500 + T-rich Low_complexity Low_complexity 2 53 0 635 149 0 11 chr2 39839101 39839195 -213417388 - AluJb SINE Alu -88 224 132 951 100 0 0 chr2 39839209 39839329 -213417254 + AluSg SINE Alu 1 120 -190 2326 97 3 25 chr2 39839475 39839794 -213416789 + AluSx SINE Alu 1 312 0 313 266 171 13 chr2 39839930 39840088 -213416495 + L1MEc LINE L1 57 239 -6157 1959 253 97 70 chr2 39840560 39841556 -213415027 + L1MEc LINE L1 656 1623 -4592 2113 75 28 11 chr2 39841556 39841838 -213414745 + AluSc SINE Alu 1 287 -22 1959 253 97 70 chr2 39841838 39842253 -213414330 + L1MEc LINE L1 1623 2025 -4190 2303 112 0 0 chr2 39842253 39842556 -213414027 + AluSp SINE Alu 1 303 -10 1959 253 97 70 chr2 39842556 39842773 -213413810 + L1MEc LINE L1 2025 2235 -3980 2150 101 38 0 chr2 39842773 39843061 -213413522 - AluSq SINE Alu -14 299 1 1959 253 97 70 chr2 39843061 39843346 -213413237 + L1MEc LINE L1 2235 2610 -3605 2097 91 40 10 chr2 39843346 39843642 -213412941 - AluSx SINE Alu -7 305 1 1959 253 97 70 chr2 39843642 39843729 -213412854 + L1MEc LINE L1 2610 2693 -3522 1129 148 220 9 chr2 39843743 39843849 -213412734 - Charlie5 DNA MER1_type -28 2596 2514 1769 93 118 38 chr2 39843849 39844138 -213412445 - AluJb SINE Alu 0 312 1 1129 148 220 9 chr2 39844138 39844368 -213412215 - Charlie5 DNA MER1_type -110 2514 2189 249 189 81 14 chr2 39844368 39844442 -213412141 - Charlie5 DNA MER1_type -2498 114 36 2311 109 0 0 chr2 39844693 39844996 -213411587 + AluSc SINE Alu 1 303 -6 1658 64 10 5 chr2 39845114 39845318 -213411265 + AluSc SINE Alu 96 300 -9 184 306 0 0 chr2 39845509 39845558 -213411025 - MIR3 SINE MIR -35 173 125 330 294 206 0 chr2 39845627 39845763 -213410820 - MER5A DNA MER1_type 0 189 26 2114 74 42 7 chr2 39846066 39846351 -213410232 + AluY SINE Alu 1 295 -16 2197 94 0 27 chr2 39846841 39847140 -213409443 + AluSx SINE Alu 9 299 -13 2211 101 13 13 chr2 39847491 39847798 -213408785 + AluSq SINE Alu 1 307 -6 1721 161 12 46 chr2 39847905 39848228 -213408355 - AluJb SINE Alu 0 312 1 239 227 34 92 chr2 39848495 39848614 -213407969 + L1MC/D LINE L1 5644 5755 -2053 2461 69 0 3 chr2 39848717 39849021 -213407562 + AluY SINE Alu 1 303 -8 248 260 128 77 chr2 39849422 39849618 -213406965 - MIR SINE MIR -55 207 2 457 279 52 22 chr2 39850082 39850218 -213406365 - MER5A DNA MER1_type 0 189 50 642 267 187 33 chr2 39850285 39850585 -213405998 - L2 LINE L2 -1 3312 2967 304 332 63 21 chr2 39850703 39850893 -213405690 - MIR SINE MIR -64 198 1 2300 85 0 0 chr2 39851627 39851939 -213404644 + AluSg SINE Alu 1 312 0 2477 68 0 0 chr2 39852408 39852704 -213403879 + AluY SINE Alu 1 296 -15 537 68 0 0 chr2 39852777 39852851 -213403732 + (CA)n Simple_repeat Simple_repeat 1 74 0 2168 108 0 14 chr2 39853018 39853154 -213403429 + AluSq SINE Alu 1 137 -176 1810 121 48 35 chr2 39853154 39853443 -213403140 + AluSg SINE Alu 1 293 -17 2168 108 0 14 chr2 39853443 39853602 -213402981 + AluSq SINE Alu 137 292 -21 567 149 168 0 chr2 39854658 39854765 -213401818 - FLAM_C SINE Alu -8 125 1 1865 69 0 13 chr2 39854967 39855200 -213401383 + AluY SINE Alu 1 230 -81 208 229 9 67 chr2 39855893 39855998 -213400585 + C-rich Low_complexity Low_complexity 3 101 0 1687 66 5 0 chr2 39856843 39857054 -213399529 - AluSg1 SINE Alu -97 212 1 288 172 0 0 chr2 39857352 39857410 -213399173 + GA-rich Low_complexity Low_complexity 1 58 0 225 290 0 0 chr2 39857768 39857830 -213398753 + T-rich Low_complexity Low_complexity 1 62 0 22 0 0 0 chr2 39857912 39857934 -213398649 + AT_rich Low_complexity Low_complexity 1 22 0 2198 115 3 0 chr2 39857934 39858230 -213398353 + AluSx SINE Alu 1 297 -15 318 216 21 82 chr2 39858233 39858330 -213398253 + MER66B LTR ERV1 292 382 -104 1641 154 31 0 chr2 39858536 39858795 -213397788 + AluJo SINE Alu 1 267 -45 2013 114 22 41 chr2 39859695 39860010 -213396573 + AluSg SINE Alu 2 310 0 376 303 162 11 chr2 39860342 39860527 -213396056 + MIR SINE MIR 49 261 -1 371 300 33 89 chr2 39860615 39860795 -213395788 - MIR SINE MIR -71 191 22 198 0 0 0 chr2 39860797 39860819 -213395764 + (T)n Simple_repeat Simple_repeat 1 22 0 752 85 0 11 chr2 39860823 39860917 -213395666 - AluSg/x SINE Alu -135 177 85 2378 86 3 6 chr2 39861365 39861679 -213394904 + AluSp SINE Alu 1 313 0 229 188 0 0 chr2 39862396 39862444 -213394139 + MLT1H1 LTR MaLR 472 519 -36 958 224 74 83 chr2 39862801 39862883 -213393700 - MER69 DNA AcHobo 0 2526 2445 1717 151 28 11 chr2 39862883 39863167 -213393416 + AluJb SINE Alu 14 302 -10 958 224 74 83 chr2 39863167 39863336 -213393247 - MER69 DNA AcHobo -81 2445 2278 2211 121 0 13 chr2 39863336 39863649 -213392934 - AluSx SINE Alu -3 309 1 958 224 74 83 chr2 39863649 39863815 -213392768 - MER69 DNA AcHobo -248 2278 2112 1779 165 0 11 chr2 39863816 39864216 -213392367 + AluJb SINE Alu 3 399 0 327 25 0 0 chr2 39864216 39864256 -213392327 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 768 162 6 11 chr2 39864426 39864605 -213391978 + GA-rich Low_complexity Low_complexity 3 180 0 185 250 23 0 chr2 39865229 39865273 -213391310 - MIR SINE MIR 0 262 218 1294 111 0 0 chr2 39865296 39865467 -213391116 - AluSp SINE Alu -6 307 137 2753 3 0 0 chr2 39865470 39865760 -213390823 - AluYa5 SINE Alu -10 301 12 464 321 38 27 chr2 39865761 39865945 -213390638 - MIR SINE MIR -75 187 2 2460 76 0 3 chr2 39866473 39866777 -213389806 + AluSg SINE Alu 1 303 -7 396 287 4 8 chr2 39866839 39867022 -213389561 + MER41B LTR ERV1 112 427 -208 182 284 64 64 chr2 39868365 39868474 -213388109 + L3 LINE CR1 613 721 -856 1594 162 19 52 chr2 39869491 39869800 -213386783 + AluJo SINE Alu 10 308 -4 2488 76 0 0 chr2 39870084 39870387 -213386196 - AluY SINE Alu -8 303 1 1575 251 54 54 chr2 39870432 39870504 -213386079 - MLT1L LTR MaLR -4 611 540 2329 74 7 32 chr2 39870504 39870813 -213385770 + AluSg SINE Alu 1 301 -9 1575 251 54 54 chr2 39870813 39871349 -213385234 - MLT1L LTR MaLR -74 541 3 25 0 0 0 chr2 39871906 39871931 -213384652 + AT_rich Low_complexity Low_complexity 1 25 0 1057 205 5 5 chr2 39871976 39872171 -213384412 + AluJb SINE Alu 109 303 -9 497 269 98 21 chr2 39872172 39872365 -213384218 + MER102b DNA MER1_type 134 341 0 3193 141 21 3 chr2 39872427 39873159 -213383424 + L1PA15 LINE L1 4752 5491 -669 2385 120 11 0 chr2 39873159 39873515 -213383068 + L1PA15 LINE L1 5804 6165 0 2074 134 0 23 chr2 39873530 39873670 -213382913 + AluSx SINE Alu 1 143 -169 2114 138 0 3 chr2 39873670 39873968 -213382615 + AluSx SINE Alu 1 297 -15 2074 134 0 23 chr2 39873968 39874133 -213382450 + AluSx SINE Alu 143 299 -13 2355 93 10 3 chr2 39874678 39874978 -213381605 - AluSg SINE Alu -8 302 1 2061 112 0 0 chr2 39874978 39875247 -213381336 - AluSx SINE Alu -13 299 31 3814 127 118 35 chr2 39875247 39876528 -213380055 + pTR5 LTR ERV1 743 2438 0 1888 156 27 0 chr2 39876564 39876859 -213379724 - AluSx SINE Alu -9 303 1 1459 132 12 33 chr2 39877410 39877653 -213378930 + AluJo SINE Alu 72 309 -3 2188 135 7 0 chr2 39877772 39878076 -213378507 + AluSx SINE Alu 1 306 -6 320 355 14 14 chr2 39878171 39878309 -213378274 - L2 LINE L2 -8 3264 3127 1953 170 0 0 chr2 39878442 39878736 -213377847 + AluSx SINE Alu 3 296 -16 2167 247 76 14 chr2 39878760 39879457 -213377126 + L1ME3A LINE L1 5425 6164 -6 2275 112 3 0 chr2 39879522 39879817 -213376766 + AluSx SINE Alu 1 296 -16 315 210 6 182 chr2 39880414 39880590 -213375993 + MIR SINE MIR 62 206 -56 460 82 47 0 chr2 39880691 39880776 -213375807 + CT-rich Low_complexity Low_complexity 3 91 0 7110 61 4 48 chr2 39880777 39882510 -213374073 + SVA Other Other 1 1383 -3 2084 128 7 3 chr2 39882521 39882819 -213373764 + AluSq SINE Alu 1 299 -14 2424 82 0 0 chr2 39882830 39883124 -213373459 + AluSg SINE Alu 1 294 -16 397 225 88 106 chr2 39883144 39883304 -213373279 - L2 LINE L2 -230 3083 2927 1115 86 0 7 chr2 39883308 39883448 -213373135 + AluSx SINE Alu 40 178 -134 1255 161 44 32 chr2 39883456 39883704 -213372879 - MER4E LTR ERV1 -311 468 218 711 139 10 0 chr2 39883705 39883806 -213372777 + AluSq/x SINE Alu 6 107 -205 1345 73 9 2 chr2 39883806 39884038 -213372545 + MER4E LTR ERV1 483 766 0 * 2179 111 99 0 chr2 39884038 39884368 -213372215 - MER1A DNA MER1_type -166 363 1 499 232 7 56 chr2 39884535 39884677 -213371906 + MER69A DNA AcHobo 1 135 -42 832 85 0 0 chr2 39884830 39884936 -213371647 - AluSp/q SINE Alu -9 304 199 180 0 0 0 chr2 39884954 39884974 -213371609 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 336 211 256 0 chr2 39885515 39885630 -213370953 - MIR3 SINE MIR -25 183 39 2451 92 0 0 chr2 39886230 39886533 -213370050 - AluSg SINE Alu -7 303 1 238 330 17 62 chr2 39886735 39886778 -213369805 - L3b LINE CR1 -166 1417 1374 2245 122 0 10 chr2 39886778 39887082 -213369501 - AluSx SINE Alu -11 301 1 238 330 17 62 chr2 39887082 39887214 -213369369 - L3b LINE CR1 -209 1374 1250 2177 108 3 3 chr2 39888191 39888478 -213368105 - AluSx SINE Alu -5 307 21 360 0 0 0 chr2 39888871 39888911 -213367672 + (TTA)n Simple_repeat Simple_repeat 3 42 0 4883 40 2 0 chr2 39888911 39889482 -213367101 - L1PA5 LINE L1 -18 6136 5565 888 211 19 0 chr2 39889482 39889643 -213366940 - FRAM SINE Alu -17 159 1 257 275 193 37 chr2 39889650 39889759 -213366824 - L2 LINE L2 -2 3311 3186 3649 131 23 84 chr2 39889808 39889882 -213366701 + LTR8 LTR ERV1 1 78 -613 2341 103 7 0 chr2 39889882 39890184 -213366399 - AluSp SINE Alu -9 304 1 3649 131 23 84 chr2 39890184 39890844 -213365739 + LTR8 LTR ERV1 78 690 -1 504 281 138 0 chr2 39890961 39891128 -213365455 + MIR SINE MIR 73 262 0 2334 125 0 0 chr2 39891307 39891619 -213364964 + AluSq SINE Alu 1 312 -1 1980 113 29 7 chr2 39891765 39892068 -213364515 - AluSg SINE Alu 0 309 1 2266 56 74 0 chr2 39892470 39892754 -213363829 + AluY SINE Alu 1 305 -6 428 343 89 28 chr2 39893982 39894195 -213362388 - MIR SINE MIR -12 250 25 323 266 150 91 chr2 39894267 39894361 -213362222 + L3 LINE CR1 996 1083 -494 2111 114 10 7 chr2 39894361 39894659 -213361924 - AluSx SINE Alu -13 299 1 323 266 150 91 chr2 39894659 39894850 -213361733 + L3 LINE CR1 1083 1298 -279 235 302 62 10 chr2 39894854 39894950 -213361633 - L2 LINE L2 0 3313 3213 2350 113 0 0 chr2 39895080 39895391 -213361192 - AluSq SINE Alu -2 311 1 483 308 81 0 chr2 39895412 39895610 -213360973 + L3 LINE CR1 1313 1526 -51 252 345 60 17 chr2 39896478 39896594 -213359989 + MIR SINE MIR 16 136 -72 684 201 143 0 chr2 39896614 39896768 -213359815 + MER69A DNA AcHobo 1 176 -1 859 217 95 62 chr2 39896907 39897276 -213359307 + LTR16A1 LTR ERVL 76 456 -1 22 0 0 0 chr2 39897956 39897978 -213358605 + AT_rich Low_complexity Low_complexity 1 22 0 2116 128 7 0 chr2 39897982 39898278 -213358305 + AluSg SINE Alu 1 298 -12 727 168 0 0 chr2 39898278 39898391 -213358192 - AluJo/FLAM SINE Alu -198 114 2 2514 59 0 0 chr2 39898696 39899000 -213357583 + AluY SINE Alu 1 304 -7 2039 130 59 3 chr2 39899443 39899798 -213356785 - THE1C LTR MaLR 0 375 1 2499 59 0 16 chr2 39900561 39900866 -213355717 + AluY SINE Alu 1 300 -11 2164 102 4 0 chr2 39900996 39901271 -213355312 - AluSx SINE Alu -36 276 1 462 103 216 10 chr2 39902542 39902639 -213353944 + L1MD3 LINE L1 7733 7849 -146 1197 107 0 0 chr2 39902641 39902800 -213353783 - AluSg/x SINE Alu -9 301 143 434 221 0 0 chr2 39902900 39902986 -213353597 + L1MD3 LINE L1 7888 7973 -22 1980 117 0 0 chr2 39902986 39903243 -213353340 + AluSx SINE Alu 1 257 -55 378 0 0 0 chr2 39903300 39903342 -213353241 + (TG)n Simple_repeat Simple_repeat 2 43 0 2246 111 3 3 chr2 39903870 39904176 -213352407 + AluSq SINE Alu 1 306 -7 858 128 0 30 chr2 39904183 39904316 -213352267 + FLAM_C SINE Alu 5 133 0 284 239 120 0 chr2 39904402 39904494 -213352089 - MER5A DNA MER1_type -80 109 7 843 143 0 30 chr2 39904857 39904990 -213351593 - FLAM_A SINE Alu -4 129 1 338 290 92 46 chr2 39905881 39906012 -213350571 - MIR3 SINE MIR -62 146 10 2215 137 0 0 chr2 39906135 39906441 -213350142 - AluSx SINE Alu -6 306 1 2306 120 0 16 chr2 39906444 39906761 -213349822 - AluSx SINE Alu 0 312 1 310 279 38 0 chr2 39906921 39907000 -213349583 - L2 LINE L2 -5 3267 3186 1777 158 24 17 chr2 39907284 39907582 -213349001 + AluJb SINE Alu 1 300 -12 225 227 45 15 chr2 39907893 39907959 -213348624 + MARNA DNA Mariner 243 310 -276 1648 136 173 60 chr2 39907984 39908366 -213348217 + MSTA LTR MaLR 4 428 0 1100 203 105 100 chr2 39908581 39908622 -213347961 - MLT2B1 LTR ERVL 0 520 481 246 32 0 0 chr2 39908622 39908653 -213347930 + (TG)n Simple_repeat Simple_repeat 2 32 0 1100 203 105 100 chr2 39908653 39908998 -213347585 - MLT2B1 LTR ERVL -39 481 129 2554 99 117 5 chr2 39908998 39909383 -213347200 - MSTA LTR MaLR 0 428 1 1100 203 105 100 chr2 39909383 39909424 -213347159 - MLT2B1 LTR ERVL -391 129 90 209 239 42 14 chr2 39910284 39910355 -213346228 + T-rich Low_complexity Low_complexity 2 74 0 448 225 9 45 chr2 39910475 39910586 -213345997 - MER5B DNA MER1_type -65 113 7 241 250 132 26 chr2 39910824 39910900 -213345683 - L2 LINE L2 -62 3210 3127 260 237 79 13 chr2 39911153 39911229 -213345354 + MER91C DNA MER1_type 25 105 -35 1537 194 119 22 chr2 39911558 39911918 -213344665 + MSTD LTR MaLR 2 396 0 2467 92 0 0 chr2 39912066 39912371 -213344212 - AluSx SINE Alu -7 305 1 2121 110 7 10 chr2 39914089 39914380 -213342203 - AluSx SINE Alu -14 298 9 2389 107 0 0 chr2 39914597 39914933 -213341650 - AluSg SINE Alu 0 336 1 444 311 126 18 chr2 39915440 39915662 -213340921 + MIR SINE MIR 2 247 -15 398 322 102 75 chr2 39915804 39916341 -213340242 + L2 LINE L2 2693 3263 -9 2499 70 3 0 chr2 39917368 39917670 -213338913 + AluY SINE Alu 3 305 -6 325 325 169 54 chr2 39917869 39918164 -213338419 - L2 LINE L2 -1 3271 2943 379 194 0 0 chr2 39918845 39918907 -213337676 + MER5B DNA MER1_type 1 62 -116 2096 145 3 0 chr2 39918909 39919205 -213337378 + AluSx SINE Alu 1 297 -15 696 186 46 26 chr2 39919213 39919460 -213337123 + MER61A LTR ERV1 1 343 0 426 250 9 52 chr2 39919467 39919583 -213337000 + MER5B DNA MER1_type 63 173 -5 2856 87 0 16 chr2 39920682 39921063 -213335520 + THE1C LTR MaLR 1 375 0 482 279 54 7 chr2 39921063 39921210 -213335373 - MIR3 SINE MIR -34 174 21 263 179 0 36 chr2 39921217 39921273 -213335310 + MER5B DNA MER1_type 1 54 -124 410 357 97 35 chr2 39921576 39922040 -213334543 - L2 LINE L2 -222 3050 2563 2282 108 0 6 chr2 39922082 39922396 -213334187 - AluSx SINE Alu 0 312 1 1158 178 0 17 chr2 39922562 39922792 -213333791 - AluJo SINE Alu 0 312 87 292 265 29 49 chr2 39922795 39922897 -213333686 - AluSg/x SINE Alu -116 186 87 2247 108 0 9 chr2 39923265 39923580 -213333003 - AluSx SINE Alu 0 312 1 1479 132 0 9 chr2 39923748 39923976 -213332607 - AluJo SINE Alu 0 312 87 314 210 4 0 chr2 39923979 39924052 -213332531 - AluJ/monomer SINE Alu -252 51 2 254 330 79 88 chr2 39924105 39924435 -213332148 + L2 LINE L2 2946 3272 0 2170 110 3 0 chr2 39926011 39926321 -213330262 - AluSx SINE Alu -1 311 1 295 322 11 11 chr2 39926729 39926819 -213329764 - L2 LINE L2 -4 3268 3179 721 260 20 20 chr2 39927741 39927945 -213328638 + MIR SINE MIR 47 250 -12 2074 132 0 3 chr2 39928071 39928375 -213328208 - AluSx SINE Alu -9 303 1 253 250 182 45 chr2 39928388 39928520 -213328063 + L2 LINE L2 3164 3313 0 2095 125 0 3 chr2 39929453 39929765 -213326818 - AluSx SINE Alu -1 311 1 1586 158 3 107 chr2 39929780 39930116 -213326467 - AluJo SINE Alu -1 301 1 2128 108 10 3 chr2 39930220 39930527 -213326056 - AluSg SINE Alu 0 310 2 469 298 43 19 chr2 39930875 39931083 -213325500 + L2 LINE L2 3010 3222 -91 284 118 39 0 chr2 39931083 39931134 -213325449 + Alu SINE Alu 245 297 -3 412 204 65 11 chr2 39931138 39931231 -213325352 + L2 LINE L2 3213 3310 -3 892 281 38 32 chr2 39931627 39931968 -213324615 - LTR67 LTR ERVL -2 555 213 744 157 25 57 chr2 39931978 39932137 -213324446 - LTR47A LTR ERVL -4 448 295 310 239 123 65 chr2 39932426 39932581 -213324002 - LTR67 LTR ERVL -392 165 2 3388 156 13 24 chr2 39932653 39933269 -213323314 - L1MB8 LINE L1 0 6178 5570 273 258 52 31 chr2 39933298 39933395 -213323188 - MIR SINE MIR -116 146 48 2355 97 0 0 chr2 39933457 39933767 -213322816 - AluSx SINE Alu -2 310 1 793 226 58 24 chr2 39934041 39934249 -213322334 + MLT1L LTR MaLR 135 349 -266 1823 140 46 35 chr2 39934444 39934815 -213321768 - THE1C LTR MaLR 0 375 1 373 234 0 0 chr2 39935008 39935085 -213321498 + L1MB5 LINE L1 6064 6140 -34 2308 93 0 0 chr2 39935087 39935397 -213321186 + AluSx SINE Alu 1 310 -2 267 189 94 0 chr2 39936588 39936641 -213319942 + MIR SINE MIR 82 139 -69 662 232 156 24 chr2 39936809 39937020 -213319563 - MLT1I LTR MaLR -14 395 157 1795 154 0 0 chr2 39937161 39937441 -213319142 - AluSx SINE Alu -32 280 1 297 75 0 0 chr2 39937557 39937597 -213318986 + (TTA)n Simple_repeat Simple_repeat 2 41 0 648 178 0 23 chr2 39937601 39937730 -213318853 - FLAM_A SINE Alu -9 133 8 2060 122 0 0 chr2 39937817 39938133 -213318450 - AluSx SINE Alu 0 316 1 1476 167 72 0 chr2 39938135 39938398 -213318185 - AluJb SINE Alu -19 293 12 224 396 104 11 chr2 39938477 39938659 -213317924 + L2 LINE L2 2715 2913 -401 597 323 45 0 chr2 39938844 39939042 -213317541 - MIR SINE MIR -3 259 53 701 271 175 23 chr2 39939073 39939220 -213317363 + L1ME4a LINE L1 5290 5413 -708 1608 151 48 4 chr2 39939220 39939491 -213317092 + AluSx SINE Alu 1 283 -29 701 271 175 23 chr2 39939491 39939931 -213316652 + L1ME4a LINE L1 5413 5946 -175 344 153 0 5 chr2 39940049 39940107 -213316476 + AluSc SINE Alu 1 49 -253 1458 76 0 0 chr2 39940107 39940292 -213316291 + AluSc SINE Alu 125 309 0 206 0 0 65 chr2 39941192 39941223 -213315360 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2357 87 0 0 chr2 39941334 39941643 -213314940 - AluSx SINE Alu -3 309 1 363 300 0 0 chr2 39941855 39941935 -213314648 - L2 LINE L2 -1 3312 3233 1301 217 94 3 chr2 39941948 39942247 -213314336 + MER58B DNA MER1_type 1 326 -15 2180 126 0 0 chr2 39942339 39942648 -213313935 + AluSx SINE Alu 1 309 -3 2307 93 0 0 chr2 39944392 39944731 -213311852 - AluSg SINE Alu 0 310 1 311 291 97 0 chr2 39945115 39945218 -213311365 + L3 LINE CR1 1463 1575 -2 313 248 29 95 chr2 39945921 39946131 -213310452 - L1ME3A LINE L1 -8 6162 5967 690 312 55 3 chr2 39946206 39946498 -213310085 - L1ME3A LINE L1 -219 5951 5645 1780 144 7 16 chr2 39946668 39946973 -213309610 + AluSx SINE Alu 1 302 -10 526 70 28 0 chr2 39947164 39947235 -213309348 + Alu SINE Alu 221 293 -16 455 278 139 12 chr2 39948446 39948619 -213307964 - MIR3 SINE MIR -10 198 4 291 234 203 8 chr2 39948829 39948957 -213307626 - MER112 DNA MER1_type -41 219 67 423 339 0 30 chr2 39949252 39949420 -213307163 - MIR3 SINE MIR -5 203 41 1990 102 26 36 chr2 39949629 39949967 -213306616 - AluY SINE Alu 0 335 1 234 200 18 18 chr2 39949967 39949988 -213306595 + CT-rich Low_complexity Low_complexity 2 56 0 26 0 0 0 chr2 39950048 39950074 -213306509 + AT_rich Low_complexity Low_complexity 1 26 0 801 279 40 47 chr2 39950272 39950594 -213305989 - L2 LINE L2 -50 3263 2944 2166 115 0 3 chr2 39950693 39951006 -213305577 - AluSq SINE Alu -1 312 1 228 346 39 15 chr2 39951227 39951357 -213305226 - L2 LINE L2 -298 2974 2842 1807 152 45 0 chr2 39951379 39951669 -213304914 + AluSx SINE Alu 1 303 -9 228 378 52 41 chr2 39951856 39952126 -213304457 - L2 LINE L2 -580 2734 2462 781 190 6 13 chr2 39952536 39952694 -213303889 + L1MA10 LINE L1 6176 6332 -2 21 36 0 0 chr2 39952841 39952869 -213303714 + AT_rich Low_complexity Low_complexity 1 28 0 190 143 0 29 chr2 39953033 39953068 -213303515 + MIR SINE MIR 107 140 -68 830 119 40 0 chr2 39954004 39954130 -213302453 - FLAM_C SINE Alu -12 131 1 2102 117 0 0 chr2 39954365 39954664 -213301919 + AluSx SINE Alu 1 299 -13 234 224 17 35 chr2 39954670 39954728 -213301855 - L2 LINE L2 -16 3256 3200 281 286 71 43 chr2 39955894 39956034 -213300549 + MIR SINE MIR 73 216 -46 407 213 22 44 chr2 39956311 39956451 -213300132 + (TAGA)n Simple_repeat Simple_repeat 2 139 -41 3396 141 23 95 chr2 39956451 39956726 -213299857 + LTR8 LTR ERV1 1 294 -397 2138 117 0 3 chr2 39956726 39957033 -213299550 + AluSx SINE Alu 1 306 -6 3396 141 23 95 chr2 39957033 39957502 -213299081 + LTR8 LTR ERV1 294 691 0 407 213 22 44 chr2 39957502 39957544 -213299039 + (TAGA)n Simple_repeat Simple_repeat 139 180 0 257 232 0 18 chr2 39957552 39957608 -213298975 - MLT1L LTR MaLR -8 607 553 2316 81 10 3 chr2 39957609 39957918 -213298665 + AluY SINE Alu 1 311 0 473 0 0 17 chr2 39957931 39957989 -213298594 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 283 102 85 34 chr2 39958013 39958153 -213298430 + Alu SINE Alu 247 389 0 367 322 122 9 chr2 39958182 39958412 -213298171 - MLT1L LTR MaLR -110 505 250 439 285 106 17 chr2 39959273 39959586 -213296997 + MLT1K LTR MaLR 184 547 -41 2097 76 47 0 chr2 39959716 39959993 -213296590 + AluY SINE Alu 1 290 -21 242 266 0 0 chr2 39960889 39960953 -213295630 + (CTG)n Simple_repeat Simple_repeat 3 66 0 569 14 14 0 chr2 39961095 39961165 -213295418 + (TAAA)n Simple_repeat Simple_repeat 2 72 0 979 90 0 0 chr2 39961525 39961659 -213294924 - AluSg/x SINE Alu 0 310 177 2205 87 13 0 chr2 39962077 39962377 -213294206 - AluY SINE Alu -7 304 1 2109 128 0 3 chr2 39962737 39963043 -213293540 - AluSx SINE Alu -7 305 1 276 254 164 16 chr2 39964131 39964253 -213292330 - L2 LINE L2 -9 3304 3165 245 246 49 107 chr2 39964357 39964479 -213292104 - L2 LINE L2 -341 2972 2858 2334 87 0 10 chr2 39964701 39965013 -213291570 + AluSg SINE Alu 2 310 0 201 344 135 16 chr2 39965297 39965608 -213290975 + L2 LINE L2 2133 2480 -834 1474 141 79 3 chr2 39965656 39965895 -213290688 - MLT1D LTR MaLR -5 500 258 524 62 0 0 chr2 39965895 39965959 -213290624 + MER39B LTR ERV1 1 64 -589 * 1251 203 54 104 chr2 39965952 39966415 -213290168 + LTR8A LTR ERV1 288 727 0 * 1624 80 8 76 chr2 39966415 39966676 -213289907 + MER39B LTR ERV1 411 653 0 1034 139 100 6 chr2 39966690 39966870 -213289713 - MLT1D LTR MaLR -308 197 1 238 242 48 0 chr2 39966965 39967027 -213289556 + GA-rich Low_complexity Low_complexity 4 68 0 349 279 121 85 chr2 39967228 39967500 -213289083 + L2 LINE L2 2985 3266 -6 186 43 0 0 chr2 39968138 39968161 -213288422 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 28 0 0 0 chr2 39968351 39968379 -213288204 + AT_rich Low_complexity Low_complexity 1 28 0 782 294 92 30 chr2 39968469 39968944 -213287639 - L1ME LINE L1 -389 5775 5265 1492 181 16 41 chr2 39969132 39969276 -213287307 + L1MC1 LINE L1 4964 5110 -1123 1715 159 20 10 chr2 39969276 39969578 -213287005 - AluJb SINE Alu -7 305 1 1492 181 16 41 chr2 39969578 39969981 -213286602 + L1MC1 LINE L1 5110 5486 -747 3010 130 106 20 chr2 39969981 39970521 -213286062 + LTR18B LTR ERVL 1 586 -28 5471 126 6 4 chr2 39970549 39971389 -213285194 + L1MC1 LINE L1 5482 6323 -10 2101 92 7 0 chr2 39971389 39971671 -213284912 + AluY SINE Alu 1 284 -27 289 214 10 51 chr2 39971758 39971856 -213284727 - Charlie7 DNA MER1_type 0 2612 2519 221 343 0 0 chr2 39972348 39972418 -213284165 - MIR3 SINE MIR -25 183 114 1627 145 21 25 chr2 39972548 39972861 -213283722 - AluJo SINE Alu 0 312 1 2078 106 7 3 chr2 39973068 39973369 -213283214 - AluSg SINE Alu -8 302 1 822 226 38 0 chr2 39973583 39973742 -213282841 + MER5A DNA MER1_type 7 171 -18 187 186 23 0 chr2 39973748 39973791 -213282792 + MER5A DNA MER1_type 1 44 -145 1015 200 0 11 chr2 39973933 39974118 -213282465 + AluJo SINE Alu 1 183 -129 1927 98 0 0 chr2 39974245 39974500 -213282083 + AluSx SINE Alu 7 261 -51 1896 134 6 32 chr2 39974564 39974877 -213281706 - AluSx SINE Alu -7 305 1 3443 121 27 38 chr2 39974877 39975545 -213281038 - L1MB2 LINE L1 -340 5831 5171 1689 169 0 7 chr2 39975730 39976026 -213280557 + AluJb SINE Alu 1 294 -18 2113 96 13 16 chr2 39976026 39976339 -213280244 + AluSx SINE Alu 1 312 0 1277 157 42 34 chr2 39976898 39977160 -213279423 + AluJo SINE Alu 44 307 -5 951 207 19 28 chr2 39977251 39977464 -213279119 - MIR SINE MIR -16 246 36 21 36 0 0 chr2 39978194 39978222 -213278361 + AT_rich Low_complexity Low_complexity 1 28 0 268 234 56 56 chr2 39978450 39978557 -213278026 - L1MC5 LINE L1 -426 7535 7429 276 273 112 75 chr2 39978598 39978876 -213277707 - L1MC4a LINE L1 -1456 6352 6065 1881 127 0 3 chr2 39978932 39979215 -213277368 - AluSg SINE Alu -18 292 11 2285 92 0 0 chr2 39979224 39979530 -213277053 - AluSx SINE Alu -6 306 1 2277 236 70 16 chr2 39979532 39980179 -213276404 - L1MC4a LINE L1 -1871 5937 5256 509 275 53 86 chr2 39980216 39980554 -213276029 - L1MC4a LINE L1 -898 5248 4922 231 114 0 0 chr2 39980591 39980626 -213275957 + (CA)n Simple_repeat Simple_repeat 2 36 0 244 270 45 0 chr2 39980626 39980715 -213275868 + L1ME4a LINE L1 5977 6069 -52 221 346 19 10 chr2 39981649 39981753 -213274830 - MIR SINE MIR -112 150 46 348 24 0 0 chr2 39982172 39982213 -213274370 + (TG)n Simple_repeat Simple_repeat 1 41 0 213 39 0 0 chr2 39983855 39983881 -213272702 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr2 39983888 39983918 -213272665 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr2 39983929 39983950 -213272633 + AT_rich Low_complexity Low_complexity 1 21 0 6193 14 1 15 chr2 39983963 39984677 -213271906 - L1PA2 LINE L1 -1 6154 5451 1696 125 26 22 chr2 39984870 39985182 -213271401 - AluSp SINE Alu 0 313 1 180 167 56 19 chr2 39986335 39986389 -213270194 + MIR SINE MIR 16 71 -137 339 244 138 48 chr2 39987139 39987308 -213269275 + MIR SINE MIR 38 214 -48 1009 213 74 4 chr2 39987366 39987610 -213268973 + MIR SINE MIR 1 261 -1 220 314 58 25 chr2 39987738 39987859 -213268724 + MIR3 SINE MIR 41 165 -43 198 0 0 0 chr2 39989044 39989066 -213267517 + (A)n Simple_repeat Simple_repeat 1 22 0 575 200 25 0 chr2 39990282 39990402 -213266181 - FLAM_C SINE Alu -20 123 1 1170 304 22 19 chr2 39990431 39990842 -213265741 - LTR16B LTR ERVL 0 464 53 283 167 13 51 chr2 39990905 39990983 -213265600 - L1M4 LINE L1 -913 5233 5159 832 146 29 0 chr2 39990986 39991147 -213265436 - AluJ SINE Alu 0 305 141 2418 119 91 10 chr2 39991147 39991543 -213265040 + MSTA LTR MaLR 1 428 0 823 188 0 0 chr2 39991556 39991689 -213264894 - AluJ SINE Alu -169 133 1 558 298 125 38 chr2 39991690 39992248 -213264335 - L1M4 LINE L1 -981 5165 4657 2265 96 0 3 chr2 39992248 39992551 -213264032 + AluY SINE Alu 1 302 -9 558 298 125 38 chr2 39992551 39992611 -213263972 - L1M4 LINE L1 -1489 4657 4604 1758 155 3 22 chr2 39992611 39992927 -213263656 + AluJo SINE Alu 1 310 -2 558 298 125 38 chr2 39992927 39993116 -213263467 - L1M4 LINE L1 -1542 4604 4287 460 262 139 30 chr2 39994055 39994257 -213262326 + MIR SINE MIR 2 225 -37 407 308 27 20 chr2 39994429 39994575 -213262008 - MIR SINE MIR -58 204 58 676 204 0 72 chr2 39994680 39994847 -213261736 - FRAM SINE Alu -2 174 20 2279 91 0 3 chr2 39995313 39995622 -213260961 - AluY SINE Alu -3 308 1 940 127 0 8 chr2 39996381 39996515 -213260068 - FLAM_C SINE Alu 0 133 1 201 298 165 0 chr2 39996572 39996693 -213259890 - L2 LINE L2 -5 3308 3168 1425 176 37 48 chr2 39996735 39997030 -213259553 - AluJb SINE Alu -19 293 2 641 122 0 0 chr2 39998035 39998125 -213258458 - AluS SINE Alu -221 91 2 23 33 0 0 chr2 39998434 39998464 -213258119 + AT_rich Low_complexity Low_complexity 1 30 0 445 225 0 0 chr2 39998787 39998876 -213257707 + L1M4 LINE L1 4684 4772 -1374 272 278 106 65 chr2 39999750 39999995 -213256588 - L2 LINE L2 -188 3084 2830 332 218 195 23 chr2 40000397 40000535 -213256048 + MIR3 SINE MIR 37 192 -47 1747 167 0 14 chr2 40000569 40000863 -213255720 + AluSx SINE Alu 1 290 -22 2213 109 0 0 chr2 40001126 40001430 -213255153 - AluSx SINE Alu -8 304 1 1538 73 5 0 chr2 40003173 40003377 -213253206 + AluSg/x SINE Alu 101 305 -5 486 249 115 30 chr2 40003440 40003605 -213252978 + MIR SINE MIR 22 200 -62 302 276 35 0 chr2 40003607 40003723 -213252860 + (TA)n Simple_repeat Simple_repeat 2 121 0 1977 134 0 0 chr2 40003856 40004162 -213252421 - AluSg SINE Alu -4 306 1 292 95 0 0 chr2 40004162 40004204 -213252379 - AluSp/q SINE Alu -10 293 252 1732 42 0 5 chr2 40004206 40004420 -213252163 - AluY SINE Alu -98 213 1 298 71 0 0 chr2 40004420 40004462 -213252121 - AluSq SINE Alu -10 293 252 1585 83 0 9 chr2 40004464 40004680 -213251903 - AluSq SINE Alu -99 214 1 577 224 40 40 chr2 40004682 40004883 -213251700 - L1MC5 LINE L1 -32 7929 7729 2233 78 0 3 chr2 40005561 40005845 -213250738 - AluSc SINE Alu -26 283 1 877 145 0 7 chr2 40006542 40006687 -213249896 + AluJo SINE Alu 120 263 -49 25 0 0 0 chr2 40006687 40006712 -213249871 + AT_rich Low_complexity Low_complexity 1 25 0 191 106 77 19 chr2 40006754 40006858 -213249725 + (TA)n Simple_repeat Simple_repeat 2 111 0 234 304 24 40 chr2 40007029 40007154 -213249429 - L1MC/D LINE L1 -1921 5887 5765 270 224 26 13 chr2 40008107 40008183 -213248400 - MER69 DNA AcHobo 0 2526 2450 * 479 226 48 41 chr2 40008180 40008326 -213248257 - MER69 DNA AcHobo -2379 147 1 240 100 0 0 chr2 40008553 40008593 -213247990 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2232 109 0 0 chr2 40009029 40009341 -213247242 - AluSx SINE Alu 0 312 1 308 335 126 16 chr2 40009584 40009764 -213246819 - MIR SINE MIR -48 214 11 2985 123 9 11 chr2 40009764 40010229 -213246354 + MER4C LTR ERV1 2 465 0 2302 82 6 13 chr2 40010250 40010565 -213246018 - AluSp SINE Alu 0 313 1 539 228 6 100 chr2 40010723 40010903 -213245680 + MER5A DNA MER1_type 21 183 -6 420 236 85 19 chr2 40010914 40011020 -213245563 - MER94 DNA DNA -1 133 21 198 71 0 0 chr2 40011292 40011320 -213245263 + (TC)n Simple_repeat Simple_repeat 1 28 0 234 325 71 0 chr2 40011365 40011519 -213245064 - L1MC5 LINE L1 -536 7425 7261 228 293 75 55 chr2 40011491 40011893 -213244690 - L1MC4 LINE L1 -580 7462 7044 * 1476 125 129 8 chr2 40011893 40012172 -213244411 - AluSg1 SINE Alu 0 309 1 228 293 75 55 chr2 40012172 40012233 -213244350 - L1MC4 LINE L1 -998 7044 6986 270 0 0 0 chr2 40012467 40012497 -213244086 + (T)n Simple_repeat Simple_repeat 1 30 0 1095 112 0 62 chr2 40012690 40012869 -213243714 + AluSq SINE Alu 3 170 -143 302 106 21 0 chr2 40012969 40013016 -213243567 - Alu SINE Alu -255 48 1 625 100 60 0 chr2 40013016 40013116 -213243467 + L1MA2 LINE L1 6199 6304 0 27 0 0 0 chr2 40013190 40013217 -213243366 + AT_rich Low_complexity Low_complexity 1 27 0 1132 243 56 7 chr2 40013401 40013689 -213242894 + LTR16A LTR ERVL 18 319 -131 213 39 0 0 chr2 40013689 40013715 -213242868 + (TTCCC)n Simple_repeat Simple_repeat 2 27 0 217 287 209 0 chr2 40014127 40014242 -213242341 + MIR SINE MIR 108 246 -16 2287 174 8 128 chr2 40014604 40014783 -213241800 + L1MB4 LINE L1 5630 5829 -351 295 172 5 14 chr2 40014783 40014848 -213241735 + AluSx SINE Alu 1 46 -256 2009 117 3 0 chr2 40014848 40015138 -213241445 + AluSx SINE Alu 21 311 -1 2287 174 8 128 chr2 40015138 40015519 -213241064 + L1MB4 LINE L1 5827 6180 0 333 175 88 12 chr2 40015526 40015606 -213240977 + L1MB8 LINE L1 6093 6178 0 619 265 73 39 chr2 40016217 40016477 -213240106 - MER102a DNA MER1_type -1 329 61 1758 147 0 11 chr2 40016588 40016867 -213239716 + AluSx SINE Alu 1 276 -36 775 159 0 23 chr2 40016867 40016999 -213239584 + AluSg/x SINE Alu 174 302 -8 259 236 125 0 chr2 40017407 40017479 -213239104 + MIR SINE MIR 112 192 -70 1620 111 4 0 chr2 40017488 40017713 -213238870 + AluSq SINE Alu 1 226 -87 1074 61 0 8 chr2 40017795 40017927 -213238656 - THE1A LTR MaLR -224 131 1 333 200 46 0 chr2 40017927 40017989 -213238594 - Charlie5 DNA MER1_type -2542 70 6 241 186 257 14 chr2 40017993 40018063 -213238520 + L2 LINE L2 3176 3262 -10 1216 107 0 0 chr2 40018451 40018620 -213237963 + L1PA10 LINE L1 6000 6168 0 268 250 117 78 chr2 40018756 40018884 -213237699 - MIR SINE MIR -3 259 127 2061 136 0 0 chr2 40019036 40019345 -213237238 - AluSx SINE Alu -3 309 1 258 164 149 15 chr2 40019521 40019588 -213236995 - LTR67 LTR ERVL -2 555 480 931 130 86 18 chr2 40020441 40020612 -213235971 - AluSg/x SINE Alu -12 300 128 724 117 10 0 chr2 40021035 40021138 -213235445 - AluSp SINE Alu -209 104 2 3557 131 42 0 chr2 40021280 40021859 -213234724 + LTR26 LTR ERV1 1 603 0 219 269 135 19 chr2 40021962 40022066 -213234517 - L2 LINE L2 -7 3265 3150 2139 120 3 16 chr2 40022616 40022933 -213233650 - AluSq SINE Alu 0 313 1 1026 194 28 5 chr2 40022970 40023181 -213233402 - MER20 DNA MER1_type 0 219 4 694 280 161 54 chr2 40025404 40025850 -213230733 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 40026172 40026196 -213230387 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1790 151 0 14 chr2 40026196 40026480 -213230103 - AluJb SINE Alu -32 280 1 1191 202 148 20 chr2 40027125 40027476 -213229107 + MSTD LTR MaLR 1 396 0 820 309 59 53 chr2 40027534 40028428 -213228155 + HAL1 LINE L1 12 911 -1596 290 285 147 33 chr2 40028557 40028998 -213227585 - MLT1L LTR MaLR -10 605 1 2861 119 2 5 chr2 40029235 40029665 -213226918 + L1PA15 LINE L1 5724 6152 -13 2406 51 0 3 chr2 40029897 40030189 -213226394 + AluY SINE Alu 1 291 -20 390 178 178 9 chr2 40030329 40030436 -213226147 + L2 LINE L2 3187 3311 -2 1072 82 7 0 chr2 40031223 40031358 -213225225 + AluY SINE Alu 1 136 -175 2111 114 10 7 chr2 40031987 40032284 -213224299 + AluSx SINE Alu 1 298 -14 247 294 200 0 chr2 40032684 40032769 -213223814 - L3b LINE CR1 -140 1443 1342 297 228 173 0 chr2 40032846 40032956 -213223627 + MIR SINE MIR 10 135 -73 2032 117 57 0 chr2 40033805 40034088 -213222495 - AluSx SINE Alu -13 299 1 1092 186 0 0 chr2 40034666 40034854 -213221729 + MER5A DNA MER1_type 2 189 0 2222 122 0 10 chr2 40035296 40035600 -213220983 + AluSx SINE Alu 1 301 -11 391 214 0 11 chr2 40035630 40035719 -213220864 + MLT1A1 LTR MaLR 1 88 -507 1865 212 71 40 chr2 40035780 40035810 -213220773 - L1ME LINE L1 -381 5785 5757 1576 169 28 31 chr2 40035810 40036100 -213220483 - AluJo SINE Alu -23 289 1 1865 212 71 40 chr2 40036100 40036368 -213220215 - L1ME LINE L1 -409 5757 5499 2022 130 19 19 chr2 40036368 40036675 -213219908 - AluSx SINE Alu -5 307 1 1865 212 71 40 chr2 40036675 40037379 -213219204 - L1ME LINE L1 -667 5499 4749 1250 158 59 4 chr2 40037382 40037635 -213218948 + MLT1A1 LTR MaLR 98 364 -1 1199 161 22 71 chr2 40037638 40037945 -213218638 - L1ME LINE L1 -1432 4714 4422 2097 136 0 13 chr2 40037945 40038261 -213218322 - AluSx SINE Alu 0 312 1 1199 161 22 71 chr2 40038261 40038276 -213218307 - L1ME LINE L1 -1724 4422 4408 953 300 81 44 chr2 40038470 40039133 -213217450 - HAL1 LINE L1 -1602 905 218 779 211 48 14 chr2 40039459 40039606 -213216977 - AluJ SINE Alu -19 293 142 306 233 27 27 chr2 40039606 40039679 -213216904 + FLAM_A SINE Alu 47 119 -14 728 177 15 0 chr2 40039679 40039809 -213216774 - AluJ SINE Alu -170 132 1 639 336 62 17 chr2 40040432 40040673 -213215910 + MIR SINE MIR 11 262 0 330 319 28 7 chr2 40040786 40041071 -213215512 + L1M4 LINE L1 4154 4444 -1702 1713 222 70 13 chr2 40041075 40041530 -213215053 - MLT1E2 LTR MaLR -133 493 13 424 338 185 0 chr2 40041545 40041761 -213214822 + MIR SINE MIR 7 262 0 477 219 189 30 chr2 40041771 40041972 -213214611 - L3 LINE CR1 -737 840 608 300 306 22 60 chr2 40042217 40042351 -213214232 - MIR SINE MIR -111 151 23 815 94 0 19 chr2 40043147 40043253 -213213330 - FLAM_C SINE Alu -18 125 22 1630 176 37 0 chr2 40043358 40043630 -213212953 - AluJb SINE Alu -30 282 1 959 192 0 6 chr2 40043655 40043822 -213212761 + FAM SINE Alu 1 166 -9 410 260 52 38 chr2 40044091 40044254 -213212329 - MIR SINE MIR -63 145 2 1755 145 34 0 chr2 40044573 40044835 -213211748 - AluJo SINE Alu -23 289 19 423 234 175 7 chr2 40045628 40045765 -213210818 - MIR3 SINE MIR -47 161 2 675 166 94 2 chr2 40047061 40047269 -213209314 - L1MB5 LINE L1 0 6180 5958 230 227 61 30 chr2 40048030 40048096 -213208487 + MER5B DNA MER1_type 82 149 -29 617 84 42 0 chr2 40048761 40048856 -213207727 + L1MA8 LINE L1 6128 6226 -65 730 162 17 8 chr2 40049002 40049119 -213207464 + FLAM_C SINE Alu 6 123 -20 2485 59 7 7 chr2 40049212 40049516 -213207067 + AluY SINE Alu 5 308 -3 1087 192 104 38 chr2 40049947 40050432 -213206151 - MER20B DNA MER1_type -61 722 165 27 0 0 0 chr2 40052355 40052382 -213204201 + AT_rich Low_complexity Low_complexity 1 27 0 277 217 56 77 chr2 40052660 40052803 -213203780 + L1MC4a LINE L1 4873 5012 -1134 1824 115 24 0 chr2 40053877 40054129 -213202454 + AluSx SINE Alu 55 312 0 298 269 128 0 chr2 40054165 40054243 -213202340 + L2 LINE L2 3187 3274 -39 1577 161 6 70 chr2 40054910 40055240 -213201343 + AluJo SINE Alu 1 309 -3 371 244 33 46 chr2 40055257 40055432 -213201151 - L1MC4 LINE L1 0 8042 7751 2166 99 3 3 chr2 40055587 40055879 -213200704 + AluSg SINE Alu 16 307 -3 469 296 57 71 chr2 40055945 40056187 -213200396 + L1MC4a LINE L1 5419 5663 -2145 945 119 0 15 chr2 40056187 40056321 -213200262 + FLAM_C SINE Alu 1 132 -1 469 296 57 71 chr2 40056321 40056574 -213200009 + L1MC4a LINE L1 5663 5907 -1901 2131 119 3 41 chr2 40056582 40056901 -213199682 - AluSx SINE Alu -5 307 1 562 233 72 28 chr2 40057095 40057275 -213199308 + MLT1F1 LTR MaLR 32 219 -323 1179 223 16 0 chr2 40057301 40057543 -213199040 + MLT1F1 LTR MaLR 322 567 0 26 0 0 0 chr2 40059243 40059269 -213197314 + AT_rich Low_complexity Low_complexity 1 26 0 292 304 71 9 chr2 40059611 40059723 -213196860 + MIR SINE MIR 33 151 -111 482 282 106 39 chr2 40059745 40060000 -213196583 - L2 LINE L2 0 3313 3042 444 171 0 0 chr2 40060175 40060245 -213196338 - MER44D DNA MER2_type 0 605 536 1709 161 13 26 chr2 40060246 40060551 -213196032 + AluJo SINE Alu 3 303 -9 1175 128 111 4 chr2 40060641 40060876 -213195707 - MER44D DNA MER2_type -79 530 1 234 0 0 0 chr2 40061698 40061724 -213194859 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr2 40065523 40065544 -213191039 + AT_rich Low_complexity Low_complexity 1 21 0 203 61 30 0 chr2 40066024 40066057 -213190526 + (CA)n Simple_repeat Simple_repeat 2 35 0 483 277 174 96 chr2 40068099 40068546 -213188037 - L3 LINE CR1 -23 1554 1073 267 264 286 14 chr2 40068636 40068776 -213187807 + MIR3 SINE MIR 16 193 -15 828 45 0 27 chr2 40068792 40068937 -213187646 + L1PA3 LINE L1 6040 6155 0 21 71 0 0 chr2 40069209 40069251 -213187332 + AT_rich Low_complexity Low_complexity 1 42 0 2226 94 13 3 chr2 40071797 40072095 -213184488 - AluSc SINE Alu -8 301 1 1548 123 186 4 chr2 40072123 40072376 -213184207 + AluSq SINE Alu 1 299 -14 26 36 0 36 chr2 40073526 40073556 -213183027 + AT_rich Low_complexity Low_complexity 1 30 -23 1665 187 10 3 chr2 40073556 40073845 -213182738 - AluJb SINE Alu -21 291 1 26 36 0 36 chr2 40073845 40073869 -213182714 + AT_rich Low_complexity Low_complexity 30 53 0 27 62 0 0 chr2 40074388 40074436 -213182147 + AT_rich Low_complexity Low_complexity 1 48 0 2287 68 0 0 chr2 40075511 40075791 -213180792 - AluY SINE Alu -16 295 16 251 262 48 0 chr2 40076758 40076842 -213179741 + MIR SINE MIR 175 262 0 2114 134 71 85 chr2 40077241 40077675 -213178908 + MSTA LTR MaLR 1 428 0 2281 100 7 3 chr2 40077753 40078053 -213178530 + AluSg SINE Alu 1 301 -9 528 193 0 12 chr2 40078247 40078330 -213178253 + FLAM_A SINE Alu 2 83 -59 1311 198 21 25 chr2 40080222 40080505 -213176078 + AluJo SINE Alu 16 297 -15 2344 97 0 0 chr2 40081179 40081478 -213175105 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr2 40081591 40081626 -213174957 + AT_rich Low_complexity Low_complexity 1 35 0 1560 129 98 4 chr2 40083103 40083367 -213173216 + AluSg1 SINE Alu 11 299 -10 2186 92 6 16 chr2 40083377 40083691 -213172892 + AluY SINE Alu 1 311 0 575 221 46 119 chr2 40083691 40084052 -213172531 + L1MC4 LINE L1 7646 7981 -61 24 67 0 0 chr2 40084063 40084108 -213172475 + AT_rich Low_complexity Low_complexity 1 45 0 1866 147 35 3 chr2 40084149 40084434 -213172149 + AluSx SINE Alu 1 294 -18 1875 136 19 16 chr2 40084477 40084785 -213171798 + AluSg SINE Alu 1 309 -1 29 0 0 0 chr2 40084963 40084992 -213171591 + AT_rich Low_complexity Low_complexity 1 29 0 2335 69 3 0 chr2 40085045 40085335 -213171248 + AluSx SINE Alu 1 291 -21 1806 152 21 3 chr2 40085750 40086040 -213170543 - AluSx SINE Alu -17 295 1 29 28 0 0 chr2 40086496 40086532 -213170051 + AT_rich Low_complexity Low_complexity 1 36 0 434 283 45 40 chr2 40086685 40086862 -213169721 - L3 LINE CR1 -291 1286 1109 2401 69 3 7 chr2 40087166 40087469 -213169114 - AluSg1 SINE Alu -7 302 1 531 212 22 120 chr2 40087799 40087983 -213168600 + MLT1K LTR MaLR 391 556 -32 185 273 182 0 chr2 40088070 40088136 -213168447 + L2 LINE L2 3230 3307 -6 242 270 81 14 chr2 40089840 40089914 -213166669 - MIR3 SINE MIR -47 161 83 1661 125 6 78 chr2 40089927 40090247 -213166336 + AluJb SINE Alu 1 297 -15 23 0 0 0 chr2 40090782 40090805 -213165778 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr2 40091365 40091392 -213165191 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr2 40091643 40091667 -213164916 + GC_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr2 40091935 40091972 -213164611 + GC_rich Low_complexity Low_complexity 1 37 0 237 343 86 0 chr2 40093438 40093543 -213163040 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 40093941 40093976 -213162607 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 40095373 40095452 -213161131 - L2 LINE L2 -44 3228 3139 483 245 30 114 chr2 40095527 40095680 -213160903 - MIR SINE MIR -31 231 103 1590 181 0 4 chr2 40095680 40095950 -213160633 + AluJb SINE Alu 41 309 -3 483 245 30 114 chr2 40095950 40096033 -213160550 - MIR SINE MIR -159 103 15 1795 167 0 25 chr2 40096131 40096449 -213160134 - AluJo SINE Alu -2 310 1 1946 150 33 0 chr2 40096596 40096896 -213159687 - AluSx SINE Alu -2 310 1 2529 51 0 0 chr2 40097600 40097896 -213158687 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 40097943 40097964 -213158619 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 40098006 40098044 -213158539 + AT_rich Low_complexity Low_complexity 1 38 0 2864 61 3 66 chr2 40098656 40098892 -213157691 - THE1A LTR MaLR 0 355 150 2089 138 3 0 chr2 40098892 40099188 -213157395 + AluSx SINE Alu 1 297 -15 2864 61 3 66 chr2 40099188 40099330 -213157253 - THE1A LTR MaLR -205 150 1 305 210 48 0 chr2 40099330 40099392 -213157191 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 40099396 40099452 -213157131 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 40099854 40100023 -213156560 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 40100159 40100287 -213156296 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 40100439 40100748 -213155835 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 40100924 40100991 -213155592 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 40101853 40102015 -213154568 - AluSg/x SINE Alu -12 298 126 691 118 20 10 chr2 40102437 40102539 -213154044 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 40102682 40103261 -213153322 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 40103364 40103468 -213153115 - L2 LINE L2 -7 3265 3150 2134 120 3 16 chr2 40104018 40104335 -213152248 - AluSq SINE Alu 0 313 1 1116 194 28 5 chr2 40104372 40104583 -213152000 - MER20B DNA MER1_type 0 219 4 833 278 161 54 chr2 40106805 40107251 -213149332 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 40107572 40107596 -213148987 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1789 151 0 14 chr2 40107596 40107880 -213148703 - AluJb SINE Alu -32 280 1 1339 202 148 20 chr2 40108525 40108876 -213147707 + MSTD LTR MaLR 1 396 0 1123 306 59 53 chr2 40108934 40109828 -213146755 + HAL1 LINE L1 12 911 -1596 217 202 0 36 chr2 40110181 40110265 -213146318 + T-rich Low_complexity Low_complexity 4 84 0 237 343 86 0 chr2 40111500 40111605 -213144978 + L2 LINE L2 3155 3268 -4 35 0 0 0 chr2 40112003 40112038 -213144545 + AT_rich Low_complexity Low_complexity 1 35 0 248 304 139 0 chr2 40113435 40113514 -213143069 - L2 LINE L2 -44 3228 3139 497 248 25 113 chr2 40113589 40113742 -213142841 - MIR SINE MIR -31 231 105 1590 181 0 4 chr2 40113742 40114012 -213142571 + AluJb SINE Alu 41 309 -3 497 248 25 113 chr2 40114012 40114096 -213142487 - MIR SINE MIR -157 105 15 1795 167 0 25 chr2 40114194 40114512 -213142071 - AluJo SINE Alu -2 310 1 1946 150 33 0 chr2 40114659 40114959 -213141624 - AluSx SINE Alu -2 310 1 2529 51 0 0 chr2 40115663 40115959 -213140624 - AluY SINE Alu -15 296 1 21 0 0 0 chr2 40116006 40116027 -213140556 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr2 40116069 40116107 -213140476 + AT_rich Low_complexity Low_complexity 1 38 0 2864 61 3 66 chr2 40116719 40116955 -213139628 - THE1A LTR MaLR 0 355 150 2089 138 3 0 chr2 40116955 40117251 -213139332 + AluSx SINE Alu 1 297 -15 2864 61 3 66 chr2 40117251 40117393 -213139190 - THE1A LTR MaLR -205 150 1 305 210 48 0 chr2 40117393 40117455 -213139128 - Charlie5 DNA MER1_type -2542 70 6 244 214 18 18 chr2 40117459 40117515 -213139068 + L2 LINE L2 3176 3231 -41 1272 107 0 0 chr2 40117917 40118086 -213138497 + L1PA10 LINE L1 6000 6168 0 243 250 117 78 chr2 40118222 40118350 -213138233 - MIR SINE MIR -3 259 127 2177 136 0 0 chr2 40118502 40118811 -213137772 - AluSx SINE Alu -3 309 1 265 164 149 15 chr2 40118987 40119054 -213137529 - LTR67 LTR ERVL -2 555 480 932 130 86 19 chr2 40119916 40120078 -213136505 - AluSg/x SINE Alu -12 300 128 758 118 10 0 chr2 40120500 40120602 -213135981 - AluSp SINE Alu -209 104 2 3845 135 42 0 chr2 40120745 40121324 -213135259 + LTR26 LTR ERV1 1 603 0 215 279 135 19 chr2 40121427 40121531 -213135052 - L2 LINE L2 -7 3265 3150 2151 120 3 16 chr2 40122081 40122398 -213134185 - AluSp SINE Alu 0 313 1 1116 194 28 5 chr2 40122435 40122646 -213133937 - MER20B DNA MER1_type 0 219 4 836 280 161 54 chr2 40124869 40125315 -213131268 + MLT1K LTR MaLR 3 496 -92 216 0 0 0 chr2 40125636 40125660 -213130923 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1810 151 0 14 chr2 40125660 40125944 -213130639 - AluJb SINE Alu -32 280 1 1322 202 148 20 chr2 40126589 40126940 -213129643 + MSTD LTR MaLR 1 396 0 1106 306 59 53 chr2 40126998 40127892 -213128691 + HAL1 LINE L1 12 911 -1596 401 313 170 34 chr2 40128021 40128462 -213128121 - MLT1J LTR MaLR -10 501 1 2929 119 2 5 chr2 40128699 40129129 -213127454 + L1PA15 LINE L1 5724 6152 -13 2465 51 0 3 chr2 40129361 40129653 -213126930 + AluY SINE Alu 1 291 -20 345 182 125 0 chr2 40129812 40129900 -213126683 + L2 LINE L2 3213 3311 -2 2452 75 0 0 chr2 40130687 40130982 -213125601 + AluY SINE Alu 1 295 -16 2167 116 0 7 chr2 40131012 40131313 -213125270 + AluSx SINE Alu 6 304 -8 29 60 0 0 chr2 40131393 40131443 -213125140 + AT_rich Low_complexity Low_complexity 1 50 0 2546 30 40 0 chr2 40131827 40132126 -213124457 - AluY SINE Alu 0 311 1 297 305 0 0 chr2 40132621 40132703 -213123880 - MIR SINE MIR -28 234 153 2340 115 0 3 chr2 40132983 40133296 -213123287 - AluSx SINE Alu 0 312 1 2146 146 24 26 chr2 40134171 40134690 -213121893 - MLT2A2 LTR ERVL 0 554 1 308 229 49 25 chr2 40134989 40135111 -213121472 + MLT1L LTR MaLR 489 613 -2 558 261 23 47 chr2 40135232 40135447 -213121136 - HAL1 LINE L1 -1596 911 702 558 237 85 15 chr2 40135715 40135907 -213120676 - MIR SINE MIR 0 262 55 2225 106 0 0 chr2 40135907 40136217 -213120366 - AluSg SINE Alu 0 310 1 558 237 85 15 chr2 40136217 40136236 -213120347 - MIR SINE MIR -207 55 39 582 263 107 32 chr2 40136243 40136616 -213119967 + L1ME LINE L1 593 993 -5126 750 157 8 22 chr2 40136673 40136807 -213119776 + AluJo SINE Alu 3 134 -178 322 298 8 16 chr2 40136913 40137034 -213119549 + L1ME LINE L1 4025 4144 -1985 25 0 0 0 chr2 40137178 40137203 -213119380 + AT_rich Low_complexity Low_complexity 1 25 0 1888 161 62 4 chr2 40137289 40137711 -213118872 - MLT1D LTR MaLR 0 505 1 1898 159 7 0 chr2 40137739 40138041 -213118542 - AluJb SINE Alu -8 304 1 480 295 66 19 chr2 40138042 40138300 -213118283 + L1ME LINE L1 4492 4761 -1368 276 245 75 32 chr2 40138531 40138625 -213117958 + L1ME3A LINE L1 5985 6082 -88 2186 120 0 20 chr2 40138642 40138942 -213117641 - AluSx SINE Alu -18 294 1 27 0 0 0 chr2 40139252 40139279 -213117304 + AT_rich Low_complexity Low_complexity 1 27 0 355 313 30 0 chr2 40139330 40139461 -213117122 + L1ME LINE L1 5512 5646 -458 235 185 37 0 chr2 40139858 40139912 -213116671 - HsTC2 DNA Tc2 -1842 56 1 2200 96 4 0 chr2 40140020 40140343 -213116240 - AluSx SINE Alu 0 324 1 593 280 108 21 chr2 40140424 40140813 -213115770 - L1MC4a LINE L1 -1689 6119 5697 2498 55 0 0 chr2 40140964 40141254 -213115329 + AluY SINE Alu 4 293 -18 2208 139 4 18 chr2 40141272 40141656 -213114927 - L1PA16 LINE L1 -3 6165 5811 1498 177 45 15 chr2 40142807 40143073 -213113510 - AluJo SINE Alu -27 285 12 1956 162 0 0 chr2 40143435 40143737 -213112846 + AluJb SINE Alu 5 306 -6 585 175 167 0 chr2 40144208 40144322 -213112261 + FLAM_C SINE Alu 1 133 0 1264 103 185 13 chr2 40144327 40144559 -213112024 + MSTA LTR MaLR 157 428 0 2463 57 7 0 chr2 40144797 40145096 -213111487 + AluY SINE Alu 1 301 -10 652 167 26 22 chr2 40145105 40145223 -213111360 + GA-rich Low_complexity Low_complexity 1 117 -423 2334 71 6 6 chr2 40145223 40145534 -213111049 + AluY SINE Alu 1 311 0 652 167 26 22 chr2 40145534 40145643 -213110940 + GA-rich Low_complexity Low_complexity 117 540 0 26 30 0 0 chr2 40145879 40145912 -213110671 + AT_rich Low_complexity Low_complexity 1 33 0 203 283 0 9 chr2 40146330 40146436 -213110147 + GA-rich Low_complexity Low_complexity 3 107 0 2330 84 3 0 chr2 40146921 40147218 -213109365 + AluSx SINE Alu 1 298 -14 1171 136 57 4 chr2 40147722 40147950 -213108633 + L1MA8 LINE L1 6029 6268 -23 65 0 0 0 chr2 40147985 40148050 -213108533 + AT_rich Low_complexity Low_complexity 1 65 0 2159 107 0 0 chr2 40148052 40148333 -213108250 + AluSx SINE Alu 11 291 -21 2202 123 0 0 chr2 40148334 40148664 -213107919 + AluSx SINE Alu 1 312 0 429 249 87 44 chr2 40148780 40149074 -213107509 + L1ME3A LINE L1 5590 5891 -230 570 176 130 0 chr2 40149101 40149209 -213107374 + FLAM_A SINE Alu 1 122 -11 263 121 17 0 chr2 40149241 40149299 -213107284 + (TA)n Simple_repeat Simple_repeat 1 59 0 709 113 0 0 chr2 40149442 40149539 -213107044 + AluS SINE Alu 2 98 -214 1158 124 12 0 chr2 40149539 40149700 -213106883 - AluSq SINE Alu -140 173 11 4098 126 19 76 chr2 40149818 40151147 -213105436 - pTR5 LTR ERV1 0 2468 1524 2486 90 0 0 chr2 40151738 40152050 -213104533 - AluSq SINE Alu -1 312 1 1016 171 13 31 chr2 40152392 40152620 -213103963 + L1MB8 LINE L1 5955 6178 0 2627 40 0 3 chr2 40152630 40152933 -213103650 + AluY SINE Alu 1 302 -9 1885 110 62 4 chr2 40153079 40153352 -213103231 + AluSq SINE Alu 2 290 -23 438 273 57 106 chr2 40153515 40153852 -213102731 + MLT1J LTR MaLR 118 437 -74 2381 91 3 0 chr2 40153852 40154150 -213102433 - AluSp SINE Alu -14 299 1 438 273 57 106 chr2 40154150 40154179 -213102404 + MLT1J LTR MaLR 437 466 -45 1852 142 62 0 chr2 40154229 40154518 -213102065 + AluJb SINE Alu 1 307 -5 2443 96 0 0 chr2 40155014 40155326 -213101257 + AluSx SINE Alu 1 312 0 3347 129 2 4 chr2 40155517 40156013 -213100570 - LOR1a LTR ERV1 -2 495 1 1809 140 0 0 chr2 40156619 40156884 -213099699 + AluSx SINE Alu 37 301 -11 1982 120 40 7 chr2 40157104 40157404 -213099179 - AluSx SINE Alu -2 310 1 234 256 233 30 chr2 40158515 40158648 -213097935 + MIR SINE MIR 10 169 -93 201 278 19 0 chr2 40158947 40159001 -213097582 - MER5A DNA MER1_type -5 184 130 2490 76 3 0 chr2 40159008 40159310 -213097273 + AluSp SINE Alu 1 303 -10 2127 130 7 0 chr2 40159320 40159627 -213096956 + AluSq SINE Alu 1 309 -4 2193 126 0 0 chr2 40159635 40159936 -213096647 + AluSx SINE Alu 1 301 -11 1192 198 118 1 chr2 40159967 40160371 -213096212 + LTR54 LTR ERV1 1 466 -32 1629 170 14 54 chr2 40160371 40160499 -213096084 + AluJo SINE Alu 1 133 -179 1890 141 16 29 chr2 40160499 40160805 -213095778 - AluJo SINE Alu -10 302 1 1629 170 14 54 chr2 40160805 40160970 -213095613 + AluJo SINE Alu 133 282 -30 2603 238 50 26 chr2 40160990 40161668 -213094915 + MER21B LTR ERV1 63 756 -107 1476 178 29 61 chr2 40162414 40162791 -213093792 - MLT1A1 LTR MaLR 0 365 1 685 241 114 93 chr2 40163790 40163985 -213092598 + MLT1J LTR MaLR 1 190 -321 2184 134 0 0 chr2 40163985 40164298 -213092285 + AluSq SINE Alu 1 313 0 685 241 114 93 chr2 40164298 40164488 -213092095 + MLT1J LTR MaLR 190 394 -117 1103 234 107 26 chr2 40164517 40164825 -213091758 + LTR40c LTR ERVL 45 377 -88 681 280 78 69 chr2 40164835 40165285 -213091298 - L1ME3A LINE L1 -222 5948 5495 383 204 154 37 chr2 40165288 40165450 -213091133 - L2 LINE L2 -2 3311 3131 2124 108 56 0 chr2 40165453 40165607 -213090976 - AluSx SINE Alu -8 304 160 2179 89 28 0 chr2 40165607 40165898 -213090685 - AluSx SINE Alu -9 303 5 2124 108 56 0 chr2 40165898 40166031 -213090552 - AluSx SINE Alu -152 160 1 345 274 118 37 chr2 40166297 40166432 -213090151 + MIR SINE MIR 31 176 -86 290 308 111 0 chr2 40166522 40166639 -213089944 - MIR SINE MIR -112 150 21 257 258 0 30 chr2 40166674 40166740 -213089843 - L2 LINE L2 -4 3309 3246 324 306 102 0 chr2 40166890 40166998 -213089585 + L2 LINE L2 3148 3266 -6 2145 123 7 0 chr2 40167175 40167477 -213089106 + AluSx SINE Alu 1 304 -8 1905 141 0 4 chr2 40167550 40167851 -213088732 - AluSx SINE Alu 0 312 13 1633 202 0 0 chr2 40167924 40168216 -213088367 + AluJo SINE Alu 1 292 -20 26 0 0 67 chr2 40168217 40168240 -213088343 + AT_rich Low_complexity Low_complexity 1 21 -21 2123 98 7 3 chr2 40168240 40168526 -213088057 + AluSg SINE Alu 1 287 -23 26 0 0 67 chr2 40168526 40168547 -213088036 + AT_rich Low_complexity Low_complexity 21 42 0 2154 106 18 0 chr2 40168555 40168839 -213087744 + AluSx SINE Alu 1 289 -23 1999 155 0 16 chr2 40169163 40169335 -213087248 - AluJb SINE Alu -7 305 139 2378 79 7 0 chr2 40169335 40169625 -213086958 - AluSq SINE Alu -21 292 1 1999 155 0 16 chr2 40169625 40169762 -213086821 - AluJb SINE Alu -173 139 1 2096 110 3 30 chr2 40170135 40170436 -213086147 - AluSx SINE Alu -19 293 1 533 294 29 0 chr2 40171336 40171506 -213085077 + MER5A DNA MER1_type 1 175 -14 2205 42 7 88 chr2 40171967 40172298 -213084285 - AluY SINE Alu 0 306 1 206 278 167 0 chr2 40173682 40173736 -213082847 - L2 LINE L2 -76 3196 3134 1527 96 0 10 chr2 40174023 40174232 -213082351 + AluSg/x SINE Alu 82 288 -24 398 88 0 35 chr2 40174288 40174345 -213082238 - AluSq/x SINE Alu -150 152 98 1174 93 6 0 chr2 40174345 40174506 -213082077 + AluSg/x SINE Alu 134 295 -17 2017 125 93 63 chr2 40174508 40174846 -213081737 + MER39 LTR ERV1 258 611 -96 917 185 0 12 chr2 40174846 40175008 -213081575 - FRAM SINE Alu -6 160 1 2017 125 93 63 chr2 40175008 40175068 -213081515 + MER39 LTR ERV1 611 668 -39 272 98 24 0 chr2 40175174 40175215 -213081368 - Alu SINE Alu -261 42 1 701 235 266 11 chr2 40175256 40175477 -213081106 - L2 LINE L2 -2304 1010 847 1935 130 0 7 chr2 40175477 40175770 -213080813 + AluJb SINE Alu 1 291 -21 701 235 266 11 chr2 40175770 40175901 -213080682 - L2 LINE L2 -2467 847 568 1784 256 106 20 chr2 40176198 40176737 -213079846 + MLT1G1 LTR MaLR 1 585 -10 225 0 0 0 chr2 40176854 40176879 -213079704 + (T)n Simple_repeat Simple_repeat 1 25 0 189 114 86 0 chr2 40176974 40177009 -213079574 - MIR SINE MIR -7 255 218 1504 151 37 37 chr2 40177066 40177364 -213079219 - AluJb SINE Alu -14 298 1 2171 114 3 0 chr2 40177502 40177801 -213078782 - AluSq SINE Alu -13 300 1 2198 102 0 0 chr2 40177811 40178104 -213078479 - AluSg1 SINE Alu -16 293 1 22 35 0 0 chr2 40178651 40178680 -213077903 + AT_rich Low_complexity Low_complexity 1 29 0 2218 106 3 0 chr2 40178795 40179106 -213077477 + AluSx SINE Alu 1 312 0 1959 122 7 7 chr2 40179157 40179453 -213077130 + AluJo SINE Alu 1 296 -16 256 193 55 128 chr2 40179521 40179593 -213076990 + MIR SINE MIR 72 135 -127 1914 133 3 7 chr2 40179593 40179887 -213076696 + AluSx SINE Alu 1 293 -19 256 193 55 128 chr2 40179887 40179923 -213076660 + MIR SINE MIR 135 172 -90 360 0 0 0 chr2 40179947 40179987 -213076596 + (CA)n Simple_repeat Simple_repeat 2 41 0 2161 101 3 0 chr2 40180027 40180325 -213076258 - AluSp SINE Alu -14 299 1 1141 144 6 0 chr2 40180422 40180596 -213075987 - FAM SINE Alu 0 175 1 830 291 38 8 chr2 40181267 40181504 -213075079 + MIR SINE MIR 18 261 -1 261 270 27 115 chr2 40181506 40181561 -213075022 + MIR SINE MIR 1 59 -203 1933 142 17 0 chr2 40181561 40181863 -213074720 + AluJb SINE Alu 1 307 -5 261 270 27 115 chr2 40181863 40181955 -213074628 + MIR SINE MIR 59 135 -127 1782 209 26 28 chr2 40181959 40182428 -213074155 + L1 LINE L1 2173 2640 -3506 2129 103 7 0 chr2 40182781 40183073 -213073510 + AluSx SINE Alu 1 294 -18 267 171 26 92 chr2 40183101 40183177 -213073406 + MIR SINE MIR 184 254 -8 694 231 154 14 chr2 40183199 40183372 -213073211 - MIR SINE MIR 0 262 50 1828 157 3 7 chr2 40183372 40183671 -213072912 - AluJo SINE Alu -13 299 2 694 231 154 14 chr2 40183671 40183718 -213072865 - MIR SINE MIR -212 50 11 290 211 215 81 chr2 40185002 40185225 -213071358 + L3 LINE CR1 594 846 -731 501 287 8 0 chr2 40185274 40185403 -213071180 + MIR SINE MIR 84 213 -49 933 123 0 37 chr2 40185418 40185605 -213070978 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 278 204 0 0 chr2 40185641 40185690 -213070893 - MIR SINE MIR -211 51 3 185 367 0 13 chr2 40185736 40185815 -213070768 + L3 LINE CR1 869 946 -631 2241 87 0 3 chr2 40185833 40186131 -213070452 + AluSx SINE Alu 1 297 -15 2277 99 0 0 chr2 40186245 40186548 -213070035 + AluSq SINE Alu 6 308 -5 878 135 0 0 chr2 40186589 40186715 -213069868 + FLAM_C SINE Alu 1 126 -17 286 345 192 0 chr2 40186719 40186896 -213069687 + L3 LINE CR1 1178 1388 -189 367 253 167 37 chr2 40187017 40187179 -213069404 + MER5A DNA MER1_type 7 189 0 2025 96 45 3 chr2 40188540 40188832 -213067751 - AluY SINE Alu -5 306 3 245 256 15 19 chr2 40188868 40188956 -213067627 + MER5A DNA MER1_type 33 126 -62 1453 144 44 72 chr2 40188960 40189142 -213067441 - AluJo SINE Alu 0 312 126 363 23 0 0 chr2 40189142 40189186 -213067397 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 1853 125 4 0 chr2 40189196 40189468 -213067115 - AluSx SINE Alu -39 273 1 1453 144 44 72 chr2 40189468 40189594 -213066989 - AluJo SINE Alu -195 117 2 403 307 159 64 chr2 40189640 40190402 -213066181 + L2 LINE L2 1791 2624 -690 753 188 0 16 chr2 40190418 40190546 -213066037 - FLAM_A SINE Alu -7 126 1 1628 143 49 18 chr2 40190615 40190901 -213065682 - AluJo SINE Alu -17 295 1 1236 403 27 0 chr2 40190991 40191284 -213065299 + AluSg SINE Alu 1 301 -9 757 143 84 0 chr2 40191335 40191454 -213065129 - MER96 DNA MER1_type? -12 163 35 251 300 128 39 chr2 40191611 40191791 -213064792 + L2 LINE L2 3073 3268 -4 1331 186 23 30 chr2 40192432 40192733 -213063850 - AluJo SINE Alu -13 299 1 981 181 0 6 chr2 40192751 40192933 -213063650 + FRAM SINE Alu 1 175 -1 1814 149 3 13 chr2 40193051 40193390 -213063193 - AluSx SINE Alu 0 312 1 440 310 29 46 chr2 40193508 40193682 -213062901 - MIR3 SINE MIR -8 200 30 2346 87 6 0 chr2 40193715 40194026 -213062557 + AluSp SINE Alu 1 313 0 351 0 0 0 chr2 40194027 40194066 -213062517 + (TA)n Simple_repeat Simple_repeat 2 40 0 356 133 0 112 chr2 40194077 40194150 -213062433 - AluSg/x SINE Alu -114 186 130 271 86 0 35 chr2 40194170 40194228 -213062355 + (TA)n Simple_repeat Simple_repeat 1 56 0 37 23 0 0 chr2 40194750 40194794 -213061789 + AT_rich Low_complexity Low_complexity 1 44 0 192 271 17 0 chr2 40194973 40195032 -213061551 - L2 LINE L2 0 3313 3254 23 33 0 0 chr2 40195223 40195253 -213061330 + AT_rich Low_complexity Low_complexity 1 30 0 3487 166 22 17 chr2 40196089 40196868 -213059715 + L1M2 LINE L1 2536 3325 -3523 2003 129 7 3 chr2 40196868 40197163 -213059420 + AluSx SINE Alu 1 296 -16 3487 166 22 17 chr2 40197163 40197434 -213059149 + L1M2 LINE L1 3325 3593 -3255 640 176 23 8 chr2 40197453 40197584 -213058999 - FLAM_C SINE Alu 0 133 1 595 178 8 34 chr2 40197818 40197936 -213058647 - FRAM SINE Alu -61 115 1 267 153 17 0 chr2 40197936 40197995 -213058588 + MER39 LTR ERV1 609 668 -39 733 103 71 48 chr2 40198241 40198400 -213058183 + FLAM_C SINE Alu 1 133 0 1631 194 154 26 chr2 40198690 40199119 -213057464 + LTR2B LTR ERV1 7 490 0 1917 116 39 0 chr2 40199189 40199473 -213057110 + AluSc SINE Alu 2 296 -13 186 43 0 0 chr2 40199474 40199497 -213057086 + (T)n Simple_repeat Simple_repeat 1 23 0 1827 100 4 4 chr2 40199497 40199747 -213056836 - AluSx SINE Alu -62 250 1 293 272 96 52 chr2 40200052 40200188 -213056395 + MIR3 SINE MIR 24 165 -43 1547 122 146 36 chr2 40200864 40201200 -213055383 - THE1C LTR MaLR -2 373 1 1882 133 20 0 chr2 40201297 40201597 -213054986 + AluJb SINE Alu 5 310 -2 239 291 73 18 chr2 40201731 40201841 -213054742 + L2 LINE L2 3197 3312 -1 1143 213 30 0 chr2 40202137 40202342 -213054241 + MIR SINE MIR 20 234 -28 1785 104 4 12 chr2 40202342 40202601 -213053982 + AluSq SINE Alu 35 291 -22 1143 213 30 0 chr2 40202601 40202630 -213053953 + MIR SINE MIR 234 261 -1 324 230 59 82 chr2 40203127 40203156 -213053427 + L1MC4a LINE L1 5797 5825 -1983 2118 51 0 29 chr2 40203156 40203431 -213053152 + AluY SINE Alu 45 311 0 324 230 59 82 chr2 40203431 40203536 -213053047 + L1MC4a LINE L1 5825 5928 -1880 772 184 5 70 chr2 40203704 40203775 -213052808 + MER53 DNA DNA 2 76 -113 2288 75 7 0 chr2 40203775 40204069 -213052514 - AluSc SINE Alu -11 298 3 772 184 5 70 chr2 40204069 40204198 -213052385 + MER53 DNA DNA 76 189 0 594 239 0 0 chr2 40204366 40204475 -213052108 + MER44D DNA MER2_type 5 383 -226 1980 126 0 0 chr2 40204478 40204763 -213051820 + AluSx SINE Alu 3 287 -25 344 266 45 71 chr2 40204812 40204966 -213051617 + HAL1b LINE L1 1198 1347 -1 2380 56 7 3 chr2 40205102 40205127 -213051456 - AluY SINE Alu -5 306 283 414 0 0 0 chr2 40205127 40205173 -213051410 + (TG)n Simple_repeat Simple_repeat 1 46 0 2380 56 7 3 chr2 40205173 40205452 -213051131 - AluY SINE Alu -28 283 1 183 266 319 18 chr2 40205984 40206064 -213050519 - MIR SINE MIR -56 206 151 2173 113 0 0 chr2 40206064 40206375 -213050208 + AluSx SINE Alu 1 311 -1 183 266 319 18 chr2 40206375 40206407 -213050176 - MIR SINE MIR -111 151 60 2112 99 24 0 chr2 40207601 40207893 -213048690 - AluSp SINE Alu -14 299 1 215 179 0 167 chr2 40208510 40208566 -213048017 + MIR SINE MIR 35 76 -186 2175 115 0 0 chr2 40208566 40208870 -213047713 - AluSx SINE Alu -8 304 1 215 179 0 167 chr2 40208870 40208891 -213047692 + MIR SINE MIR 76 99 -163 240 230 230 22 chr2 40208976 40209040 -213047543 + MIR SINE MIR 92 141 -121 321 181 28 14 chr2 40209040 40209112 -213047471 + MER116 DNA Mariner 5 77 -3 240 230 230 22 chr2 40209112 40209182 -213047401 + MIR SINE MIR 141 254 -8 498 285 145 9 chr2 40209268 40209489 -213047094 + MIR SINE MIR 6 256 -6 1781 166 0 22 chr2 40209592 40209905 -213046678 - AluJb SINE Alu -6 306 1 270 272 218 27 chr2 40209953 40210100 -213046483 - MIR3 SINE MIR -1 207 33 1840 145 21 0 chr2 40210437 40210727 -213045856 + AluSx SINE Alu 1 296 -16 191 214 0 24 chr2 40211552 40211594 -213044989 + MIR SINE MIR 17 57 -151 295 310 97 71 chr2 40211846 40212198 -213044385 - L3 LINE CR1 -1102 475 115 2142 114 3 0 chr2 40212198 40212497 -213044086 + AluSq SINE Alu 1 300 -13 1233 144 16 98 chr2 40212938 40213156 -213043427 - MER46A DNA MER2_type -2495 236 40 2291 85 0 0 chr2 40213156 40213450 -213043133 - AluSq SINE Alu -19 294 1 1233 144 16 98 chr2 40213450 40213487 -213043096 - MER46A DNA MER2_type -2691 40 2 840 131 0 15 chr2 40213976 40214106 -213042477 + AluJo/FLAM SINE Alu 3 130 -172 1783 164 3 3 chr2 40214108 40214420 -213042163 + AluSx SINE Alu 1 312 0 1227 225 75 36 chr2 40214510 40214870 -213041713 - MLT1L LTR MaLR -144 471 98 2092 99 20 3 chr2 40215292 40215596 -213040987 - AluSx SINE Alu -3 309 1 2273 60 3 0 chr2 40215804 40216147 -213040436 - AluY SINE Alu 0 344 1 993 196 91 0 chr2 40216165 40216374 -213040209 + L1ME2 LINE L1 5703 5930 -234 2061 125 0 3 chr2 40217011 40217314 -213039269 + AluSx SINE Alu 1 302 -10 2206 112 0 0 chr2 40217513 40217809 -213038774 + AluSx SINE Alu 1 296 -16 2279 78 3 0 chr2 40217815 40218110 -213038473 + AluSp SINE Alu 3 298 -15 301 208 0 0 chr2 40218116 40218164 -213038419 - MER20 DNA MER1_type -170 49 2 265 257 110 59 chr2 40218364 40218395 -213038188 - MIR3 SINE MIR -27 181 153 2253 81 3 13 chr2 40218395 40218703 -213037880 - AluSp SINE Alu -8 305 1 265 257 110 59 chr2 40218703 40218807 -213037776 - MIR3 SINE MIR -55 153 39 1106 186 70 8 chr2 40219504 40219746 -213036837 + L1MD3 LINE L1 7739 7995 0 861 87 0 0 chr2 40219773 40219888 -213036695 + AluJb SINE Alu 1 115 -197 30 83 0 0 chr2 40219888 40219960 -213036623 + AT_rich Low_complexity Low_complexity 1 72 0 1560 167 29 14 chr2 40220040 40220316 -213036267 - AluJb SINE Alu -32 280 1 1754 139 7 20 chr2 40220980 40221274 -213035309 + AluJo SINE Alu 2 291 -21 21 0 0 0 chr2 40221308 40221329 -213035254 + AT_rich Low_complexity Low_complexity 1 21 0 888 130 0 0 chr2 40221997 40222128 -213034455 - FLAM_C SINE Alu -6 137 7 250 242 121 100 chr2 40222232 40222463 -213034120 - L2 LINE L2 -99 3173 2938 2136 131 0 0 chr2 40222784 40223096 -213033487 + AluSx SINE Alu 1 312 0 626 291 0 17 chr2 40223262 40223434 -213033149 - MIR SINE MIR -76 186 18 1566 172 28 7 chr2 40223489 40223779 -213032804 + AluJo SINE Alu 2 297 -15 198 240 0 0 chr2 40224076 40224126 -213032457 + GA-rich Low_complexity Low_complexity 4 53 0 2365 71 0 3 chr2 40224198 40224508 -213032075 + AluY SINE Alu 1 309 -2 843 152 7 0 chr2 40224724 40224862 -213031721 + AluJb SINE Alu 1 139 -173 239 0 0 31 chr2 40224882 40224914 -213031669 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2036 97 0 17 chr2 40225257 40225582 -213031001 - AluSx SINE Alu 0 320 1 2266 94 3 0 chr2 40225704 40226002 -213030581 - AluSq SINE Alu -14 299 1 996 175 16 5 chr2 40226006 40226195 -213030388 - AluJo SINE Alu -2 310 120 830 160 0 0 chr2 40226219 40226350 -213030233 - FLAM_C SINE Alu -7 136 6 2314 101 0 0 chr2 40226365 40226673 -213029910 - AluSx SINE Alu -4 308 1 1787 137 4 4 chr2 40227534 40227804 -213028779 - AluSx SINE Alu -19 293 24 890 124 0 16 chr2 40228364 40228493 -213028090 - FLAM_C SINE Alu -5 128 2 2199 98 0 0 chr2 40228510 40228797 -213027786 - AluSq SINE Alu -26 287 1 1061 85 55 0 chr2 40228846 40229010 -213027573 - L1MA5 LINE L1 -3 6297 6125 556 47 0 0 chr2 40229110 40229174 -213027409 + AluSq/x SINE Alu 62 125 -187 362 207 259 16 chr2 40229174 40229367 -213027216 + L2 LINE L2 1032 1271 -2043 440 307 48 7 chr2 40229828 40229974 -213026609 + MIR3 SINE MIR 41 193 -15 189 338 59 0 chr2 40230062 40230130 -213026453 - L2 LINE L2 -44 3228 3157 1931 166 43 98 chr2 40230158 40230477 -213026106 + MER65C LTR ERV1 1 336 -125 1815 150 3 10 chr2 40230477 40230790 -213025793 + AluJo SINE Alu 1 311 -1 1931 166 43 98 chr2 40230790 40230894 -213025689 + MER65C LTR ERV1 336 396 -65 2045 129 3 0 chr2 40230894 40231189 -213025394 - AluSx SINE Alu -16 296 1 1931 166 43 98 chr2 40231189 40231252 -213025331 + MER65C LTR ERV1 396 461 0 1627 173 0 4 chr2 40232224 40232501 -213024082 + AluJb SINE Alu 2 277 -35 213 39 0 0 chr2 40232510 40232536 -213024047 + (CA)n Simple_repeat Simple_repeat 2 27 0 433 156 0 0 chr2 40232551 40232615 -213023968 + FRAM/FAM SINE Alu 13 76 -100 1888 130 27 3 chr2 40232678 40232977 -213023606 - AluSx SINE Alu 0 312 7 2548 29 3 0 chr2 40233188 40233496 -213023087 - AluYa5 SINE Alu -2 309 1 1957 104 50 0 chr2 40233598 40233876 -213022707 + AluSq SINE Alu 1 292 -21 2083 112 0 0 chr2 40233920 40234206 -213022377 + AluSx SINE Alu 17 302 -10 2147 108 7 0 chr2 40234417 40234724 -213021859 + AluSg SINE Alu 1 309 -1 2193 99 3 0 chr2 40235082 40235375 -213021208 + AluSx SINE Alu 1 294 -18 1959 96 44 0 chr2 40235385 40235686 -213020897 + AluSx SINE Alu 1 313 0 752 203 0 0 chr2 40235992 40236125 -213020458 + MER2 DNA MER2_type 4 136 -209 1094 172 24 10 chr2 40236168 40236333 -213020250 - AluJb SINE Alu -20 292 122 186 71 0 0 chr2 40236333 40236361 -213020222 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1094 172 24 10 chr2 40236361 40236404 -213020179 - AluJb SINE Alu -190 122 81 214 311 16 0 chr2 40237171 40237232 -213019351 + L2 LINE L2 3206 3267 -5 2096 104 0 0 chr2 40237257 40237535 -213019048 - AluSg SINE Alu -32 278 1 2086 112 10 0 chr2 40237609 40237905 -213018678 + AluSq SINE Alu 1 299 -14 1864 140 0 10 chr2 40237910 40238217 -213018366 + AluSx SINE Alu 1 304 -8 1128 138 6 0 chr2 40238217 40238391 -213018192 + AluSg/x SINE Alu 134 308 -4 637 122 0 57 chr2 40238983 40239083 -213017500 - AluSg/x SINE Alu -7 302 209 1781 103 0 4 chr2 40239083 40239326 -213017257 - AluSq SINE Alu -71 242 1 637 122 0 57 chr2 40239326 40239348 -213017235 - AluSg/x SINE Alu -100 209 187 1810 151 10 3 chr2 40239607 40239906 -213016677 + AluJo SINE Alu 1 301 -11 2118 117 0 0 chr2 40239907 40240206 -213016377 + AluSx SINE Alu 1 299 -13 2146 84 40 0 chr2 40241085 40241382 -213015201 + AluSc SINE Alu 1 309 0 236 137 0 78 chr2 40241383 40241434 -213015149 - LTR9 LTR ERV1 -131 481 435 187 221 13 78 chr2 40241950 40242027 -213014556 - L2 LINE L2 -1 3271 3200 368 192 39 58 chr2 40242057 40242161 -213014422 - L1MC4a LINE L1 -467 7341 7240 2213 125 60 165 chr2 40242329 40242517 -213014066 + LTR42 LTR ERVL 1 207 -288 1844 91 0 60 chr2 40242517 40242802 -213013781 + AluSq SINE Alu 1 268 -45 437 87 29 0 chr2 40242806 40242875 -213013708 + Alu SINE Alu 240 310 0 2213 125 60 165 chr2 40242875 40243166 -213013417 + LTR42 LTR ERVL 210 495 0 1943 97 0 78 chr2 40243402 40243721 -213012862 + AluSx SINE Alu 1 294 -18 2093 97 7 0 chr2 40243949 40244237 -213012346 + AluSg1 SINE Alu 2 291 -18 321 185 15 0 chr2 40244256 40244321 -213012262 - Tigger8 DNA MER2_type -432 234 169 290 253 65 113 chr2 40244582 40244654 -213011929 + L1M4 LINE L1 25 99 -6443 684 187 0 43 chr2 40244654 40244793 -213011790 - FLAM_A SINE Alu 0 133 1 290 253 65 113 chr2 40244793 40244949 -213011634 + L1M4 LINE L1 99 242 -6300 317 331 88 6 chr2 40245198 40245358 -213011225 + L1M4 LINE L1 716 888 -5654 964 191 12 6 chr2 40245395 40245563 -213011020 + FAM SINE Alu 1 169 -6 1593 221 139 51 chr2 40245581 40245627 -213010956 + L1M4 LINE L1 1305 1346 -5479 1998 135 0 0 chr2 40245627 40245923 -213010660 + AluSx SINE Alu 1 296 -16 1593 221 139 51 chr2 40245923 40245983 -213010600 + L1M4 LINE L1 1346 1399 -5426 1650 126 30 15 chr2 40245983 40246254 -213010329 + AluSx SINE Alu 1 275 -37 204 67 0 0 chr2 40246258 40246288 -213010295 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1593 221 139 51 chr2 40246288 40246994 -213009589 + L1M4 LINE L1 1401 2324 -4501 2313 90 0 0 chr2 40246994 40247293 -213009290 + AluSc SINE Alu 1 299 -10 1593 221 139 51 chr2 40247293 40247449 -213009134 + L1M4 LINE L1 2324 2465 -4360 22 35 0 0 chr2 40247506 40247535 -213009048 + AT_rich Low_complexity Low_complexity 1 29 0 967 114 0 0 chr2 40247535 40247667 -213008916 + AluSq/x SINE Alu 1 132 -180 2197 97 7 0 chr2 40247669 40247968 -213008615 + AluSp SINE Alu 1 301 -12 305 265 163 96 chr2 40248220 40248270 -213008313 - MER5B DNA MER1_type 0 178 133 1482 157 60 8 chr2 40248270 40248538 -213008045 + AluJb SINE Alu 6 287 -25 305 265 163 96 chr2 40248538 40248653 -213007930 - MER5B DNA MER1_type -45 133 2 750 246 86 12 chr2 40248907 40249151 -213007432 - MER58B DNA MER1_type 0 341 80 1490 151 39 18 chr2 40249152 40249436 -213007147 + AluJo SINE Alu 1 290 -22 2068 94 11 0 chr2 40249444 40249731 -213006852 + AluSx SINE Alu 1 290 -22 411 272 201 6 chr2 40249732 40249901 -213006682 + L1MC/D LINE L1 5429 5630 -2178 954 110 19 26 chr2 40250001 40250156 -213006427 - AluSg/x SINE Alu -18 292 139 29 0 0 0 chr2 40250160 40250189 -213006394 + AT_rich Low_complexity Low_complexity 1 29 0 1853 120 7 17 chr2 40252339 40252639 -213003944 + AluSx SINE Alu 1 297 -15 306 258 0 0 chr2 40254051 40254113 -213002470 + FRAM/FAM SINE Alu 1 59 -107 1407 167 70 11 chr2 40255200 40255470 -213001113 + AluJb SINE Alu 6 291 -21 21 89 0 0 chr2 40257471 40257527 -212999056 + GC_rich Low_complexity Low_complexity 1 56 0 22 56 0 0 chr2 40257876 40257912 -212998671 + GC_rich Low_complexity Low_complexity 1 36 0 1648 160 14 3 chr2 40258412 40258699 -212997884 + AluSx SINE Alu 12 301 -11 430 189 15 152 chr2 40258793 40258925 -212997658 + MLT2B1 LTR ERVL 351 520 0 255 208 97 0 chr2 40258928 40259000 -212997583 - L1ME LINE L1 -250 5871 5793 345 270 181 93 chr2 40259096 40259169 -212997414 - L1ME LINE L1 -607 5514 5449 2253 83 3 0 chr2 40259169 40259459 -212997124 + AluY SINE Alu 1 291 -20 1922 134 10 0 chr2 40259469 40259767 -212996816 + AluSg SINE Alu 1 301 -9 345 270 181 93 chr2 40259767 40259908 -212996675 - L1ME LINE L1 -680 5441 5269 1029 136 0 7 chr2 40260053 40260208 -212996375 - AluSx SINE Alu -15 295 142 572 103 0 0 chr2 40260220 40260298 -212996285 - AluSx SINE Alu -234 79 2 851 162 7 13 chr2 40260366 40260520 -212996063 - AluJb SINE Alu -78 234 82 55 45 0 0 chr2 40260754 40260820 -212995763 + GC_rich Low_complexity Low_complexity 1 66 0 2138 86 3 3 chr2 40262762 40263053 -212993530 + AluSx SINE Alu 1 291 -21 2164 76 4 0 chr2 40263146 40263423 -212993160 + AluSp SINE Alu 1 278 -35 2180 74 9 40 chr2 40263425 40263748 -212992835 + AluSq SINE Alu 1 313 0 711 156 0 8 chr2 40263886 40264008 -212992575 + FLAM_C SINE Alu 12 132 -11 22 0 0 0 chr2 40264521 40264543 -212992040 + AT_rich Low_complexity Low_complexity 1 22 0 1904 136 23 3 chr2 40264917 40265219 -212991364 - AluSx SINE Alu -4 308 1 10602 31 11 85 chr2 40265231 40266722 -212989861 - SVA Other Other -1 1385 5 195 42 0 0 chr2 40266722 40266746 -212989837 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 729 162 8 0 chr2 40267175 40267292 -212989291 + FLAM_C SINE Alu 1 118 -15 22 0 0 0 chr2 40267292 40267314 -212989269 + AT_rich Low_complexity Low_complexity 1 22 0 2128 88 3 3 chr2 40267314 40267634 -212988949 - AluSp SINE Alu 0 320 1 631 194 31 16 chr2 40267690 40267819 -212988764 + FLAM_C SINE Alu 3 133 -10 992 186 75 91 chr2 40267898 40268205 -212988378 - AluJo SINE Alu 0 302 1 1949 101 51 3 chr2 40268212 40268508 -212988075 - AluSg SINE Alu 0 310 1 6299 140 36 35 chr2 40368582 40369339 -212887244 - Tigger2 DNA MER2_type -1608 1110 350 2452 86 0 3 chr2 40369339 40369643 -212886940 - AluSp SINE Alu -10 303 1 6299 140 36 35 chr2 40369643 40369994 -212886589 - Tigger2 DNA MER2_type -2368 350 1 1822 146 18 7 chr2 40370284 40370564 -212886019 - AluSx SINE Alu -29 283 1 227 232 89 0 chr2 40370606 40370662 -212885921 - L1ME LINE L1 -377 5789 5729 1545 113 113 31 chr2 40370819 40371076 -212885507 + AluJo SINE Alu 25 302 -10 1292 267 129 49 chr2 40371245 40371794 -212884789 - L2 LINE L2 0 3313 2708 891 165 0 0 chr2 40371794 40371927 -212884656 - FLAM_C SINE Alu 0 133 1 1292 267 129 49 chr2 40371927 40372017 -212884566 - L2 LINE L2 -605 2708 2627 520 246 30 51 chr2 40372037 40372273 -212884310 - L1MC4a LINE L1 -1907 5901 5671 1233 61 0 0 chr2 40372482 40372629 -212883954 + AluSg/x SINE Alu 156 302 -10 198 0 0 0 chr2 40372629 40372651 -212883932 + (TA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr2 40372651 40372673 -212883910 + (T)n Simple_repeat Simple_repeat 1 22 0 774 277 115 64 chr2 40373087 40373600 -212882983 + HAL1 LINE L1 145 683 -1824 668 63 11 32 chr2 40373707 40373802 -212882781 - L1PA14 LINE L1 -203 5958 5866 2075 130 27 43 chr2 40373803 40373988 -212882595 - L1MB1 LINE L1 -43 6125 5947 2195 99 33 3 chr2 40373988 40374290 -212882293 - AluSq SINE Alu -2 311 1 2075 130 27 43 chr2 40374290 40374474 -212882109 - L1MB1 LINE L1 -221 5947 5762 403 96 0 0 chr2 40374485 40374537 -212882046 + L1M3 LINE L1 5611 5662 -506 887 95 95 15 chr2 40374537 40374674 -212881909 + AluSg SINE Alu 1 148 -162 577 172 0 0 chr2 40374674 40374767 -212881816 - L1MB1 LINE L1 -420 5748 5656 498 74 0 37 chr2 40374767 40374848 -212881735 - Alu SINE Alu -2 310 233 1103 214 93 43 chr2 40375038 40375318 -212881265 - AluJo SINE Alu -8 294 1 1944 137 10 13 chr2 40375878 40376191 -212880392 + AluJb SINE Alu 1 312 0 358 150 0 0 chr2 40376461 40376521 -212880062 - MER21A LTR ERV1 -355 576 517 1415 176 26 4 chr2 40376523 40376795 -212879788 + AluSx SINE Alu 1 278 -34 1341 183 11 18 chr2 40376899 40377183 -212879400 - L1MB1 LINE L1 -821 5325 5044 * 1955 169 0 27 chr2 40377180 40377552 -212879031 + L1M4 LINE L1 3761 4122 -2024 297 194 28 0 chr2 40377556 40377628 -212878955 + L1M4 LINE L1 5173 5246 -900 2516 138 30 8 chr2 40377629 40378026 -212878557 - MER73 LTR ERVL 0 644 239 957 179 22 48 chr2 40378066 40378133 -212878450 + L1M4 LINE L1 5254 5321 -853 2297 91 0 3 chr2 40378133 40378430 -212878153 + AluSx SINE Alu 1 296 -16 957 179 22 48 chr2 40378430 40378591 -212877992 + L1M4 LINE L1 5321 5476 -698 1686 67 62 0 chr2 40378600 40378825 -212877758 - L1PA10 LINE L1 -11 6157 5919 423 289 33 0 chr2 40378932 40379053 -212877530 + L2 LINE L2 2192 2316 -998 292 180 0 16 chr2 40379059 40379120 -212877463 + L2 LINE L2 2625 2684 -630 616 249 6 65 chr2 40379140 40379309 -212877274 + MER91A DNA MER1_type 13 171 -25 830 301 102 10 chr2 40379345 40379890 -212876693 + L2 LINE L2 2715 3312 -1 825 111 0 0 chr2 40379970 40380078 -212876505 + FLAM_C SINE Alu 1 108 -35 1997 108 7 3 chr2 40380090 40380376 -212876207 + Tigger3(Golem) DNA MER2_type 2604 2890 -139 333 246 59 34 chr2 40381172 40381290 -212875293 - MIR SINE MIR -60 148 28 995 142 261 43 chr2 40381640 40381893 -212874690 + AluJb SINE Alu 1 308 -4 1487 142 87 36 chr2 40382362 40382637 -212873946 + AluJb SINE Alu 1 289 -23 1728 167 18 4 chr2 40383042 40383318 -212873265 + AluJb SINE Alu 20 299 -13 8806 114 50 26 chr2 40383326 40383366 -212873217 - Tigger2 DNA MER2_type -151 2567 2529 2174 131 0 6 chr2 40383366 40383678 -212872905 - AluSx SINE Alu 0 312 3 8806 114 50 26 chr2 40383678 40385042 -212871541 - Tigger2 DNA MER2_type -189 2529 1129 1087 104 0 0 chr2 40385155 40385299 -212871284 + AluSg/x SINE Alu 152 295 -15 1720 111 43 8 chr2 40386085 40386338 -212870245 + AluSg SINE Alu 34 295 -15 2132 133 7 0 chr2 40386367 40386668 -212869915 - AluSq SINE Alu -10 303 1 1905 135 4 0 chr2 40387053 40387334 -212869249 - AluSp SINE Alu -11 302 21 2166 105 0 16 chr2 40387865 40388170 -212868413 - AluSc SINE Alu -9 300 1 1499 176 12 46 chr2 40388312 40388495 -212868088 - AluJo SINE Alu 0 312 143 207 69 0 0 chr2 40388495 40388524 -212868059 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1499 176 12 46 chr2 40388524 40388663 -212867920 - AluJo SINE Alu -169 143 1 1477 201 44 0 chr2 40389050 40389348 -212867235 - AluJb SINE Alu -1 311 1 198 182 23 0 chr2 40389380 40389424 -212867159 - MIR SINE MIR -32 230 186 269 320 12 35 chr2 40389816 40389988 -212866595 + GA-rich Low_complexity Low_complexity 4 171 0 228 139 0 0 chr2 40390003 40390046 -212866537 - Alu SINE Alu -256 43 1 1557 91 5 5 chr2 40390216 40390425 -212866158 + AluSc SINE Alu 99 307 -2 204 40 0 0 chr2 40390559 40390584 -212865999 + (CA)n Simple_repeat Simple_repeat 2 26 0 2148 101 27 7 chr2 40391291 40391587 -212864996 + AluSg1 SINE Alu 1 302 -7 2303 106 0 0 chr2 40391630 40391922 -212864661 + AluSx SINE Alu 1 292 -20 989 133 170 0 chr2 40391922 40392087 -212864496 + AluY SINE Alu 1 193 -118 339 49 0 0 chr2 40392187 40392228 -212864355 - AluY SINE Alu -260 41 1 232 160 20 0 chr2 40392232 40392282 -212864301 + L1MC5 LINE L1 7701 7751 -210 2066 120 6 35 chr2 40392282 40392599 -212863984 + AluSx SINE Alu 1 308 -4 261 0 0 0 chr2 40392599 40392628 -212863955 + (TA)n Simple_repeat Simple_repeat 2 30 0 1809 164 14 0 chr2 40392735 40393028 -212863555 + AluSq SINE Alu 1 297 -16 2460 56 0 34 chr2 40394293 40394613 -212861970 + AluSq SINE Alu 1 309 -4 1055 179 26 0 chr2 40394758 40394953 -212861630 - MER41C LTR ERV1 0 554 355 1383 126 0 0 chr2 40395082 40395272 -212861311 + AluSg/x SINE Alu 108 297 -13 297 191 45 0 chr2 40395450 40395539 -212861044 - L1ME4a LINE L1 -12 6109 6017 2214 108 3 19 chr2 40395666 40395981 -212860602 + AluSq SINE Alu 3 312 -1 1209 87 7 0 chr2 40395982 40396163 -212860420 + AluSg/x SINE Alu 130 311 0 891 171 33 0 chr2 40396169 40396321 -212860262 + FRAM SINE Alu 10 166 -10 1667 149 25 16 chr2 40396430 40396751 -212859832 - MER33 DNA MER1_type 0 324 1 899 112 0 0 chr2 40397238 40397363 -212859220 + FRAM SINE Alu 41 165 -11 274 253 11 53 chr2 40397363 40397458 -212859125 - L1ME2 LINE L1 -140 6024 5934 1139 259 98 51 chr2 40397520 40398052 -212858531 - LTR67 LTR ERVL 0 557 1 1737 181 3 16 chr2 40398275 40398584 -212857999 + AluJo SINE Alu 1 305 -7 306 219 32 89 chr2 40399308 40399431 -212857152 - MIR SINE MIR -70 192 77 1087 68 0 0 chr2 40399914 40400046 -212856537 - AluSp/q SINE Alu -4 309 178 459 146 135 0 chr2 40400159 40400248 -212856335 + MER3 DNA MER1_type 109 209 0 231 232 71 0 chr2 40400597 40400653 -212855930 - L3 LINE CR1 -3 1574 1515 248 225 4 0 chr2 40400776 40400832 -212855751 + MIR SINE MIR 63 121 -87 657 183 75 0 chr2 40400909 40401029 -212855554 - FLAM_A SINE Alu -2 131 3 2089 127 0 0 chr2 40401054 40401361 -212855222 - AluSx SINE Alu 0 307 1 2540 169 4 15 chr2 40402105 40402572 -212854011 + L1MB7 LINE L1 5723 6184 0 1205 199 40 43 chr2 40402816 40403093 -212853490 - AluJo SINE Alu -12 300 25 2021 143 0 7 chr2 40403554 40403855 -212852728 - AluSx SINE Alu -13 299 1 2208 93 4 0 chr2 40405194 40405473 -212851110 + AluSg SINE Alu 1 280 -30 2396 89 6 13 chr2 40405612 40405926 -212850657 + AluSp SINE Alu 1 312 -1 180 0 0 0 chr2 40405968 40405988 -212850595 + (A)n Simple_repeat Simple_repeat 1 20 0 2488 73 7 0 chr2 40406000 40406301 -212850282 + AluSp SINE Alu 1 303 -10 1470 92 5 10 chr2 40406304 40406436 -212850147 + AluSg SINE Alu 1 133 -177 2430 67 10 0 chr2 40406436 40406736 -212849847 + AluSp SINE Alu 1 303 -10 1470 92 5 10 chr2 40406736 40406798 -212849785 + AluSg SINE Alu 133 194 -116 1145 189 31 4 chr2 40406970 40407229 -212849354 + AluSq SINE Alu 40 305 -8 414 268 39 62 chr2 40409244 40409423 -212847160 - MIR SINE MIR -6 256 82 300 314 118 44 chr2 40409606 40409902 -212846681 + L2 LINE L2 2587 2904 -410 2144 123 3 10 chr2 40409911 40410219 -212846364 - AluSx SINE Alu -6 306 1 1002 161 51 46 chr2 40410339 40410556 -212846027 - MER20 DNA MER1_type 0 219 2 1579 155 61 37 chr2 40410583 40410880 -212845703 + AluJb SINE Alu 1 304 -8 1397 138 14 9 chr2 40411028 40411246 -212845337 + AluJb SINE Alu 83 301 -11 29 0 0 0 chr2 40411583 40411612 -212844971 + AT_rich Low_complexity Low_complexity 1 29 0 1935 127 7 14 chr2 40411626 40411910 -212844673 - AluSg SINE Alu -27 283 2 1918 149 0 16 chr2 40412307 40412616 -212843967 - AluJo SINE Alu -8 304 1 1547 101 5 0 chr2 40412643 40412842 -212843741 + AluSg/x SINE Alu 89 288 -22 1822 161 10 33 chr2 40413529 40413834 -212842749 - AluJb SINE Alu -14 298 1 27 45 0 45 chr2 40414964 40414999 -212841584 + AT_rich Low_complexity Low_complexity 1 33 -31 1686 166 0 55 chr2 40414999 40415307 -212841276 - AluJo SINE Alu -21 291 1 27 45 0 45 chr2 40415307 40415338 -212841245 + AT_rich Low_complexity Low_complexity 33 64 0 21 82 0 0 chr2 40415540 40415589 -212840994 + AT_rich Low_complexity Low_complexity 1 49 0 2070 129 13 10 chr2 40415957 40416267 -212840316 + AluSx SINE Alu 1 311 -1 2132 133 3 0 chr2 40416833 40417133 -212839450 + AluSx SINE Alu 1 301 -11 255 179 0 0 chr2 40417296 40417335 -212839248 + Alu SINE Alu 3 41 -259 541 104 13 0 chr2 40417399 40417476 -212839107 + AluS SINE Alu 2 79 -234 1329 83 0 0 chr2 40417477 40417646 -212838937 + AluSc SINE Alu 138 306 -3 2744 135 17 43 chr2 40417854 40418314 -212838269 + LTR26 LTR ERV1 1 448 -155 2183 106 0 3 chr2 40418315 40418608 -212837975 + AluSq SINE Alu 1 292 -21 2844 26 0 0 chr2 40418622 40418956 -212837627 + AluY SINE Alu 1 334 0 1306 166 14 0 chr2 40419272 40419495 -212837088 + AluJo SINE Alu 87 312 0 217 352 9 19 chr2 40419569 40419674 -212836909 - MER5B DNA MER1_type -74 104 1 280 333 88 10 chr2 40419814 40420006 -212836577 - L2 LINE L2 -1037 2277 2071 1772 171 7 0 chr2 40420147 40420434 -212836149 - AluSx SINE Alu -23 289 1 385 222 155 77 chr2 40420434 40420608 -212835975 - MIR SINE MIR 0 262 68 1850 144 26 10 chr2 40420608 40420914 -212835669 + AluJo SINE Alu 1 311 -1 385 222 155 77 chr2 40420914 40420946 -212835637 - MIR SINE MIR -194 68 40 246 167 0 0 chr2 40420999 40421035 -212835548 + U2 snRNA snRNA 1 36 -152 653 208 23 8 chr2 40421124 40421254 -212835329 - FLAM_C SINE Alu -1 132 1 213 237 163 44 chr2 40422209 40422344 -212834239 + L2 LINE L2 2919 3069 -203 2291 113 0 0 chr2 40422889 40423189 -212833394 + AluSg SINE Alu 1 300 -10 399 246 58 22 chr2 40423411 40423549 -212833034 + MIR SINE MIR 38 180 -82 2057 116 18 0 chr2 40423665 40423974 -212832609 + AluSx SINE Alu 1 314 0 317 276 0 31 chr2 40424881 40424979 -212831604 + MIR SINE MIR 91 185 -77 1028 256 54 67 chr2 40425231 40425654 -212830929 + MLT1J LTR MaLR 3 456 -55 185 346 45 38 chr2 40425908 40426041 -212830542 + MIR SINE MIR 83 216 -46 21 0 0 0 chr2 40426538 40426559 -212830024 + AT_rich Low_complexity Low_complexity 1 21 0 1038 170 18 0 chr2 40426688 40426853 -212829730 + AluJb SINE Alu 137 304 -8 484 297 61 65 chr2 40427691 40427937 -212828646 + MIR SINE MIR 12 256 -6 1044 133 0 0 chr2 40427997 40428140 -212828443 - FRAM SINE Alu -14 162 20 302 299 146 47 chr2 40428142 40428443 -212828140 + L1ME4a LINE L1 3366 3696 -2450 1967 144 23 3 chr2 40428451 40428750 -212827833 + AluSx SINE Alu 1 305 -7 419 330 113 35 chr2 40428867 40429344 -212827239 + L1ME4a LINE L1 5291 5749 -372 2193 114 10 0 chr2 40429344 40429643 -212826940 + AluSx SINE Alu 1 302 -10 419 330 113 35 chr2 40429643 40429730 -212826853 + L1ME4a LINE L1 5749 5828 -293 23 0 0 0 chr2 40429902 40429925 -212826658 + AT_rich Low_complexity Low_complexity 1 23 0 824 187 0 7 chr2 40429970 40430109 -212826474 - FLAM_C SINE Alu -4 139 2 1242 56 0 0 chr2 40430457 40430599 -212825984 - AluSq/x SINE Alu -171 142 1 195 100 0 0 chr2 40430717 40430747 -212825836 + (CA)n Simple_repeat Simple_repeat 2 31 0 2296 80 0 10 chr2 40430801 40431102 -212825481 - AluY SINE Alu -13 298 1 2387 105 0 0 chr2 40431104 40431417 -212825166 - AluSq SINE Alu 0 313 1 652 170 107 0 chr2 40432322 40432434 -212824149 - FLAM_A SINE Alu -9 124 1 209 345 130 17 chr2 40432981 40433158 -212823425 - L2 LINE L2 -822 2492 2296 322 337 110 57 chr2 40433293 40433628 -212822955 - L2 LINE L2 -2 3270 2918 201 241 0 0 chr2 40434016 40434070 -212822513 + GA-rich Low_complexity Low_complexity 2 55 0 791 218 19 32 chr2 40434155 40434371 -212822212 + L2 LINE L2 3101 3313 0 309 298 124 54 chr2 40434477 40434903 -212821680 + L1 LINE L1 4943 5398 -748 22 0 0 0 chr2 40434949 40434971 -212821612 + AT_rich Low_complexity Low_complexity 1 22 0 2473 58 7 7 chr2 40436869 40437179 -212819404 + AluY SINE Alu 2 311 0 683 216 111 28 chr2 40437394 40437575 -212819008 + MIR SINE MIR 3 198 -64 246 128 0 0 chr2 40437581 40437620 -212818963 + (CTA)n Simple_repeat Simple_repeat 3 41 0 242 254 45 0 chr2 40437822 40437889 -212818694 - L2 LINE L2 0 3313 3244 2226 117 0 0 chr2 40437951 40438251 -212818332 + AluSx SINE Alu 1 300 -12 301 254 113 132 chr2 40438318 40438629 -212817954 - MLT1L LTR MaLR -92 452 115 2089 121 7 3 chr2 40438773 40439078 -212817505 + AluSq SINE Alu 1 306 -7 482 230 0 0 chr2 40439096 40439183 -212817400 + MER21B LTR ERV1 329 415 -448 627 188 9 9 chr2 40439191 40439303 -212817280 - AluSp/q SINE Alu -13 300 189 1696 109 0 4 chr2 40439438 40439667 -212816916 - AluSp SINE Alu -85 228 1 2130 124 0 10 chr2 40439679 40439986 -212816597 - AluSg SINE Alu -6 304 1 858 168 8 0 chr2 40439992 40440123 -212816460 - FLAM_C SINE Alu 0 133 2 194 200 0 0 chr2 40440228 40440263 -212816320 - MER5A DNA MER1_type 0 189 155 755 239 39 6 chr2 40440352 40440532 -212816051 - MER5A DNA MER1_type 0 189 4 2003 115 35 0 chr2 40440756 40441043 -212815540 + AluSx SINE Alu 1 297 -15 1013 142 7 13 chr2 40441710 40441865 -212814718 - FRAM SINE Alu -13 163 10 1931 127 28 3 chr2 40441876 40442160 -212814423 - AluSg SINE Alu -19 291 1 2325 93 0 7 chr2 40442299 40442601 -212813982 - AluSp SINE Alu -13 300 1 791 269 108 29 chr2 40442644 40442923 -212813660 - AluSx SINE Alu -1 301 1 819 200 30 32 chr2 40442923 40443152 -212813431 - L1M4 LINE L1 -694 5484 5252 1892 95 0 4 chr2 40443152 40443393 -212813190 + AluSc SINE Alu 1 240 -69 819 200 30 32 chr2 40443393 40443463 -212813120 - L1M4 LINE L1 -926 5252 5183 263 28 28 0 chr2 40443463 40443499 -212813084 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1206 190 60 19 chr2 40443502 40443771 -212812812 - AluJo SINE Alu -30 282 3 676 128 154 17 chr2 40443784 40443901 -212812682 - FLAM_C SINE Alu 0 133 1 775 135 0 0 chr2 40444029 40444133 -212812450 + AluSg/x SINE Alu 191 294 -15 213 298 53 0 chr2 40444165 40444222 -212812361 + L2 LINE L2 3180 3239 -33 1784 135 36 4 chr2 40444254 40444535 -212812048 + AluSx SINE Alu 1 290 -22 23 33 0 0 chr2 40445514 40445544 -212811039 + AT_rich Low_complexity Low_complexity 1 30 0 2289 162 26 26 chr2 40445668 40446094 -212810489 + L1MA7 LINE L1 5861 6286 -5 1608 177 0 23 chr2 40446154 40446453 -212810130 + AluJo SINE Alu 1 292 -20 265 371 59 18 chr2 40446528 40446698 -212809885 - L2 LINE L2 -188 3084 2908 204 40 0 0 chr2 40447386 40447411 -212809172 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 296 285 53 18 chr2 40447944 40448057 -212808526 - MIR SINE MIR -87 121 15 2560 46 0 52 chr2 40448077 40448402 -212808181 + AluY SINE Alu 1 308 -3 381 212 24 0 chr2 40448701 40448786 -212807797 + MIR3 SINE MIR 81 167 -41 771 291 62 14 chr2 40448908 40449197 -212807386 - L2 LINE L2 0 3313 3011 210 365 47 28 chr2 40450187 40450294 -212806289 - L2 LINE L2 -10 3262 3154 1369 122 0 0 chr2 40450667 40450856 -212805727 + AluSq SINE Alu 1 189 -124 859 153 31 6 chr2 40450958 40451121 -212805462 + L1PA13 LINE L1 5992 6158 -5 192 111 0 0 chr2 40451773 40451809 -212804774 + (A)n Simple_repeat Simple_repeat 1 36 0 181 321 0 0 chr2 40451945 40452001 -212804582 - L2 LINE L2 -1 3312 3257 2006 131 0 0 chr2 40452079 40452385 -212804198 + AluSx SINE Alu 1 306 0 552 262 120 6 chr2 40452909 40453092 -212803491 + MIR SINE MIR 2 205 -57 839 163 0 23 chr2 40453889 40454018 -212802565 - FLAM_C SINE Alu -7 126 1 2694 144 23 56 chr2 40454197 40454711 -212801872 - L1MB7 LINE L1 -8 6176 5680 260 118 39 0 chr2 40454741 40454792 -212801791 - L1MB7 LINE L1 -479 5699 5647 221 200 147 13 chr2 40455077 40455152 -212801431 + MER5A DNA MER1_type 38 122 -67 485 244 107 124 chr2 40455251 40455903 -212800680 + HAL1 LINE L1 972 1612 -895 1779 155 10 0 chr2 40455946 40456237 -212800346 + AluJb SINE Alu 13 306 -6 823 115 0 58 chr2 40456259 40456398 -212800185 + FLAM_C SINE Alu 11 141 -2 261 0 0 0 chr2 40456714 40456743 -212799840 + (TTTAA)n Simple_repeat Simple_repeat 2 30 0 1201 68 0 6 chr2 40456743 40456894 -212799689 - AluYa5 SINE Alu -8 303 152 210 264 97 0 chr2 40456966 40457038 -212799545 + L2 LINE L2 2937 3015 -257 282 344 92 0 chr2 40457043 40457174 -212799409 + MIR SINE MIR 3 145 -117 255 170 0 0 chr2 40459054 40459101 -212797482 + GA-rich Low_complexity Low_complexity 3 49 0 1462 147 0 5 chr2 40459222 40459433 -212797150 + AluJo SINE Alu 1 210 -102 234 91 0 0 chr2 40459454 40459487 -212797096 + (A)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr2 40461001 40461022 -212795561 + AT_rich Low_complexity Low_complexity 1 21 0 1600 135 101 38 chr2 40461497 40461758 -212794825 - L1MB7 LINE L1 -8 6158 5846 1625 166 63 0 chr2 40461758 40462042 -212794541 - AluJb SINE Alu -10 302 1 1600 135 101 38 chr2 40462042 40462185 -212794398 - L1MB7 LINE L1 -320 5846 5713 1782 212 3 0 chr2 40462188 40462504 -212794079 - MLT1A1 LTR MaLR 0 365 49 183 42 0 0 chr2 40462504 40462528 -212794055 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1907 119 0 0 chr2 40462531 40462792 -212793791 - AluSx SINE Alu -31 281 21 1174 268 87 37 chr2 40462797 40462939 -212793644 + L2 LINE L2 2571 2704 -609 2111 140 3 0 chr2 40462939 40463247 -212793336 + AluSx SINE Alu 1 309 -3 1174 268 87 37 chr2 40463247 40463818 -212792765 + L2 LINE L2 2704 3312 -1 707 346 139 26 chr2 40464134 40464938 -212791645 - L2 LINE L2 -576 2738 1844 2156 122 3 0 chr2 40465779 40466083 -212790500 - AluSx SINE Alu -5 307 3 2320 79 0 0 chr2 40466098 40466388 -212790195 - AluY SINE Alu -21 290 1 2122 107 7 0 chr2 40466388 40466677 -212789906 - AluSp SINE Alu -22 291 1 2486 91 0 0 chr2 40466677 40466984 -212789599 - AluSc SINE Alu -2 307 1 634 277 61 17 chr2 40467135 40467448 -212789135 - L1ME4a LINE L1 -224 5897 5513 802 185 0 15 chr2 40467519 40467654 -212788929 - AluJo SINE Alu -178 134 2 947 219 0 12 chr2 40467657 40467826 -212788757 - FAM SINE Alu -8 167 1 1517 174 56 31 chr2 40467856 40468144 -212788439 - AluJb SINE Alu -17 295 1 254 241 154 56 chr2 40468147 40468182 -212788401 - L1ME4a LINE L1 -2339 5469 5439 2349 99 0 10 chr2 40468182 40468494 -212788089 - AluSg SINE Alu -1 309 1 254 241 154 56 chr2 40468494 40468620 -212787963 - L1ME4a LINE L1 -2369 5439 5292 2269 106 0 3 chr2 40468624 40468926 -212787657 - AluSx SINE Alu -11 301 1 22 0 0 0 chr2 40468932 40468954 -212787629 + AT_rich Low_complexity Low_complexity 1 22 0 937 136 0 8 chr2 40470659 40470791 -212785792 - FLAM_C SINE Alu -2 131 1 235 122 24 0 chr2 40470931 40470972 -212785611 - Alu SINE Alu -256 44 3 2234 123 0 0 chr2 40471240 40471540 -212785043 - AluSx SINE Alu -12 300 1 2337 89 3 0 chr2 40472031 40472324 -212784259 - AluSp SINE Alu -19 294 1 1604 184 17 10 chr2 40472363 40472662 -212783921 - AluSx SINE Alu -6 306 6 2316 98 0 3 chr2 40473700 40473997 -212782586 - AluSx SINE Alu -16 296 1 1295 122 0 6 chr2 40474526 40474707 -212781876 - AluJb SINE Alu -126 186 7 2027 140 0 3 chr2 40474787 40475097 -212781486 - AluSx SINE Alu 0 309 1 1642 170 24 20 chr2 40475177 40475471 -212781112 - AluJb SINE Alu -17 295 1 268 211 0 18 chr2 40475595 40475652 -212780931 - Charlie4 DNA MER1_type -23 1938 1883 1948 123 0 14 chr2 40475725 40476049 -212780534 + AluSg SINE Alu 1 310 0 1789 169 3 7 chr2 40476444 40476740 -212779843 - AluJo SINE Alu -17 295 1 354 47 0 0 chr2 40477638 40477681 -212778902 - tRNA-Gln-CAG tRNA tRNA -32 43 1 190 241 19 19 chr2 40477804 40477858 -212778725 + MIR SINE MIR 82 135 -73 280 79 0 0 chr2 40477892 40477930 -212778653 - HY1 scRNA scRNA -73 39 2 3002 220 42 24 chr2 40478163 40478678 -212777905 + L1M4 LINE L1 2656 3160 -2986 2257 105 3 0 chr2 40478678 40478973 -212777610 + AluSg SINE Alu 2 297 -13 3002 220 42 24 chr2 40478973 40479354 -212777229 + L1M4 LINE L1 3160 3561 -2585 2325 72 14 0 chr2 40479354 40479644 -212776939 - AluSp SINE Alu -19 294 1 3002 220 42 24 chr2 40479644 40479667 -212776916 + L1M4 LINE L1 3561 3582 -2564 2149 103 10 3 chr2 40479668 40479958 -212776625 - AluSx SINE Alu -20 292 1 23 54 0 0 chr2 40480612 40480649 -212775934 + AT_rich Low_complexity Low_complexity 1 37 0 4546 117 13 30 chr2 40480794 40480993 -212775590 + L1MB1 LINE L1 5482 5683 -485 2274 111 3 0 chr2 40480993 40481291 -212775292 + AluSx SINE Alu 1 299 -13 4546 117 13 30 chr2 40481291 40481790 -212774793 + L1MB1 LINE L1 5683 6168 0 2088 130 0 20 chr2 40481908 40482209 -212774374 - AluSq SINE Alu -18 295 1 2223 122 0 0 chr2 40482569 40482863 -212773720 - AluSx SINE Alu -18 294 1 1977 140 7 0 chr2 40484109 40484394 -212772189 + AluSq SINE Alu 1 287 -26 312 27 0 0 chr2 40485018 40485055 -212771528 + (TG)n Simple_repeat Simple_repeat 2 38 0 250 111 0 0 chr2 40485057 40485102 -212771481 - LTR66 LTR ERVL -171 439 395 * 268 109 0 0 chr2 40485065 40485111 -212771472 + LTR66 LTR ERVL 394 439 -171 270 81 0 0 chr2 40485113 40485150 -212771433 + (CA)n Simple_repeat Simple_repeat 2 38 0 2178 104 3 0 chr2 40485428 40485717 -212770866 - AluSp SINE Alu -23 290 1 968 154 0 0 chr2 40486156 40486305 -212770278 + AluJb SINE Alu 155 303 -9 2168 123 0 13 chr2 40486494 40486804 -212769779 - AluJb SINE Alu -6 306 1 2110 105 35 0 chr2 40486845 40487131 -212769452 - AluSg SINE Alu -14 296 1 873 199 0 0 chr2 40487148 40487279 -212769304 - FLAM_A SINE Alu -2 131 1 21 0 0 0 chr2 40487337 40487358 -212769225 + AT_rich Low_complexity Low_complexity 1 21 0 182 274 97 16 chr2 40487625 40487687 -212768896 - L2 LINE L2 -5 3308 3242 354 254 172 65 chr2 40487851 40487907 -212768676 - MIR SINE MIR -56 206 157 2283 112 0 3 chr2 40487907 40488210 -212768373 + AluSx SINE Alu 1 302 -10 354 254 172 65 chr2 40488210 40488322 -212768261 - MIR SINE MIR -105 157 20 1270 185 112 25 chr2 40488373 40488649 -212767934 + AluJo SINE Alu 1 300 -12 1008 93 0 56 chr2 40488872 40489033 -212767550 - AluSg/x SINE Alu -2 308 157 2258 76 42 7 chr2 40489134 40489422 -212767161 + AluSx SINE Alu 1 298 -14 1031 137 0 20 chr2 40489423 40489576 -212767007 + AluSg/x SINE Alu 126 275 -37 1751 128 24 14 chr2 40489720 40490010 -212766573 + AluSx SINE Alu 1 293 -19 238 220 0 51 chr2 40490256 40490315 -212766268 - AluS SINE Alu -246 57 2 525 321 96 23 chr2 40490357 40490496 -212766087 - MIR SINE MIR -13 249 87 2289 89 3 3 chr2 40490496 40490798 -212765785 + AluSq SINE Alu 1 302 -11 525 321 96 23 chr2 40490798 40490876 -212765707 - MIR SINE MIR -175 87 16 1872 152 24 7 chr2 40491265 40491562 -212765021 - AluJo SINE Alu -10 302 1 1039 58 0 0 chr2 40492090 40492237 -212764346 - AluSg/x SINE Alu 0 308 162 1923 199 50 24 chr2 40492337 40492800 -212763783 + L1MC4 LINE L1 7568 8042 0 250 289 29 77 chr2 40493795 40493899 -212762684 + MIR3 SINE MIR 10 108 -100 278 338 81 0 chr2 40494218 40494354 -212762229 - L2 LINE L2 -1 3312 3166 874 20 0 0 chr2 40494430 40494530 -212762053 + AluY SINE Alu 1 100 -211 266 312 44 21 chr2 40494866 40494972 -212761611 - MER5A DNA MER1_type -4 185 59 1984 111 41 0 chr2 40494972 40495271 -212761312 - AluSx SINE Alu 0 310 1 266 312 44 21 chr2 40495271 40495299 -212761284 - MER5A DNA MER1_type -130 59 33 2498 213 25 32 chr2 40495372 40496764 -212759819 + L1M4b LINE L1 673 2177 -4782 2420 65 0 7 chr2 40496767 40497061 -212759522 + AluY SINE Alu 1 292 -19 1059 64 64 0 chr2 40498719 40498859 -212757724 - AluSg/x SINE Alu -19 291 143 21 0 0 0 chr2 40498863 40498884 -212757699 + AT_rich Low_complexity Low_complexity 1 21 0 1053 194 29 0 chr2 40499135 40499305 -212757278 - FAM SINE Alu 0 175 1 329 337 83 24 chr2 40499327 40499532 -212757051 + L2 LINE L2 2739 2955 -359 992 158 0 12 chr2 40499571 40499765 -212756818 - AluJb SINE Alu 0 311 120 825 175 0 0 chr2 40499806 40499949 -212756634 - FLAM_C SINE Alu 0 143 1 484 271 96 21 chr2 40500034 40500222 -212756361 + L2 LINE L2 3109 3310 -3 2492 76 3 0 chr2 40501083 40501387 -212755196 - AluSp SINE Alu -8 305 1 23 54 0 0 chr2 40501404 40501441 -212755142 + AT_rich Low_complexity Low_complexity 1 37 0 1867 107 0 50 chr2 40502340 40502620 -212753963 + AluSx SINE Alu 1 266 -46 802 264 67 31 chr2 40503161 40503517 -212753066 + L1ME4a LINE L1 5616 5984 -137 2288 119 0 0 chr2 40505764 40506076 -212750507 + AluSx SINE Alu 1 312 0 625 261 74 39 chr2 40506334 40506537 -212750046 - MIR SINE MIR -3 259 50 2365 93 3 0 chr2 40507499 40507799 -212748784 + AluSg SINE Alu 1 301 -9 207 0 0 0 chr2 40507942 40507965 -212748618 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 1723 175 16 3 chr2 40508689 40508992 -212747591 - AluJo SINE Alu -1 311 5 473 128 26 0 chr2 40509282 40509360 -212747223 + MER116 DNA Mariner 1 80 0 2146 94 13 26 chr2 40510469 40510777 -212745806 - AluSx SINE Alu -8 304 1 23 0 0 0 chr2 40510781 40510804 -212745779 + AT_rich Low_complexity Low_complexity 1 23 0 1454 223 103 65 chr2 40511399 40511721 -212744862 - MLT1F LTR MaLR -29 513 164 2044 128 30 0 chr2 40511721 40512025 -212744558 - AluSq SINE Alu 0 313 1 1454 223 103 65 chr2 40512025 40512196 -212744387 - MLT1F LTR MaLR -378 164 1 359 277 85 0 chr2 40512514 40512644 -212743939 + L2 LINE L2 1964 2104 -1210 698 103 33 48 chr2 40512771 40513022 -212743561 + CT-rich Low_complexity Low_complexity 1 247 0 796 282 136 40 chr2 40513044 40513534 -212743049 - L2 LINE L2 -43 3270 2713 1219 156 0 82 chr2 40513535 40513766 -212742817 - AluJo SINE Alu -16 296 85 440 284 16 0 chr2 40513839 40513966 -212742617 - MIR SINE MIR -10 252 124 195 245 0 0 chr2 40514048 40514097 -212742486 + L2 LINE L2 3221 3269 -3 202 143 24 0 chr2 40514573 40514615 -212741968 + A-rich Low_complexity Low_complexity 3 45 0 2313 102 0 0 chr2 40515044 40515339 -212741244 + AluSq SINE Alu 1 295 -18 263 211 375 0 chr2 40515466 40515594 -212740989 + MIR SINE MIR 86 261 -1 222 275 144 38 chr2 40515981 40516141 -212740442 - MIR3 SINE MIR -16 192 16 21 0 0 0 chr2 40516834 40516855 -212739728 + GC_rich Low_complexity Low_complexity 1 21 0 1316 155 11 114 chr2 40517573 40517667 -212738916 - MER8 DNA MER2_type -1 238 136 2666 46 0 0 chr2 40517667 40517974 -212738609 + AluY SINE Alu 1 307 -4 1316 155 11 114 chr2 40517974 40517990 -212738593 - MER8 DNA MER2_type -103 136 120 1945 154 7 3 chr2 40517990 40518295 -212738288 + AluJo SINE Alu 6 311 -1 1316 155 11 114 chr2 40518295 40518447 -212738136 - MER8 DNA MER2_type -119 120 2 722 224 251 4 chr2 40518451 40518714 -212737869 + L2 LINE L2 2986 3313 0 465 273 68 30 chr2 40518762 40518894 -212737689 - L2 LINE L2 -2 3270 3134 2956 223 57 58 chr2 40518963 40519084 -212737499 - L1M4c LINE L1 -3278 3104 2984 2340 88 0 10 chr2 40519084 40519381 -212737202 + AluSx SINE Alu 1 294 -18 2956 223 57 58 chr2 40519381 40520188 -212736395 - L1M4c LINE L1 -3398 2984 2175 2066 168 48 41 chr2 40520188 40520366 -212736217 + MSTD LTR MaLR 1 176 -220 2093 93 27 27 chr2 40520366 40520666 -212735917 + AluY SINE Alu 1 300 -11 2066 168 48 41 chr2 40520666 40520880 -212735703 + MSTD LTR MaLR 176 396 0 2956 223 57 58 chr2 40520880 40521459 -212735124 - L1M4c LINE L1 -4207 2175 1597 2199 79 0 7 chr2 40521463 40521742 -212734841 - AluY SINE Alu 0 311 35 253 274 95 24 chr2 40522147 40522231 -212734352 - MIR3 SINE MIR -42 166 77 24 32 0 0 chr2 40522516 40522547 -212734036 + AT_rich Low_complexity Low_complexity 1 31 0 273 192 0 0 chr2 40522597 40522649 -212733934 - HAL1 LINE L1 -120 2387 2336 1724 155 7 17 chr2 40522736 40523033 -212733550 + AluJo SINE Alu 1 294 -18 1714 204 90 43 chr2 40523060 40523464 -212733119 - L1ME3 LINE L1 -3 6159 5776 2062 137 0 3 chr2 40523464 40523756 -212732827 - AluSx SINE Alu -21 291 1 1714 204 90 43 chr2 40523756 40524142 -212732441 - L1ME3 LINE L1 -386 5776 5323 980 178 0 18 chr2 40524144 40524307 -212732276 - AluJb SINE Alu -23 289 130 939 247 59 7 chr2 40524321 40524608 -212731975 - L1ME3 LINE L1 -1029 5117 4816 454 180 34 0 chr2 40524634 40524723 -212731860 - L1ME3 LINE L1 -1587 4559 4468 688 203 0 8 chr2 40524787 40524910 -212731673 - FLAM_A SINE Alu -11 122 1 458 184 56 101 chr2 40524958 40525137 -212731446 - HAL1 LINE L1 -648 1859 1689 2256 180 78 118 chr2 40525142 40525865 -212730718 - LTR8A LTR ERV1 0 727 34 2331 259 89 89 chr2 40525879 40526023 -212730560 - HAL1 LINE L1 -888 1619 1476 2242 109 3 0 chr2 40526023 40526327 -212730256 - AluSg SINE Alu -5 305 1 2331 259 89 89 chr2 40526327 40526643 -212729940 - HAL1 LINE L1 -1031 1476 1161 2050 114 23 10 chr2 40526643 40526942 -212729641 - AluSc SINE Alu -6 303 1 2331 259 89 89 chr2 40526942 40527416 -212729167 - HAL1 LINE L1 -1346 1161 688 2277 109 0 0 chr2 40527416 40527710 -212728873 - AluSx SINE Alu -18 294 1 2331 259 89 89 chr2 40527710 40528345 -212728238 - HAL1 LINE L1 -1818 689 48 1443 199 92 52 chr2 40528655 40529036 -212727547 - MSTD LTR MaLR 0 396 1 225 0 0 0 chr2 40529359 40529384 -212727199 + (TG)n Simple_repeat Simple_repeat 1 25 0 312 314 145 8 chr2 40530330 40530454 -212726129 - MIR SINE MIR -115 147 7 2199 141 0 0 chr2 40531103 40531408 -212725175 - AluSx SINE Alu -7 305 1 965 151 13 113 chr2 40531868 40532106 -212724477 - AluJo SINE Alu -13 299 86 449 161 11 0 chr2 40533004 40533091 -212723492 + GA-rich Low_complexity Low_complexity 4 91 0 2913 120 11 25 chr2 40534147 40534581 -212722002 - MSTA LTR MaLR 0 428 1 1959 101 31 0 chr2 40534917 40535209 -212721374 - AluSx SINE Alu 0 317 18 389 237 62 98 chr2 40535679 40535873 -212720710 - MIR3 SINE MIR 0 208 22 440 253 0 6 chr2 40535939 40535967 -212720616 + (TA)n Simple_repeat Simple_repeat 1 28 -141 846 172 0 30 chr2 40535967 40536101 -212720482 + FLAM_C SINE Alu 1 130 -3 440 253 0 6 chr2 40536101 40536242 -212720341 + (TA)n Simple_repeat Simple_repeat 28 169 0 848 224 38 61 chr2 40536377 40536641 -212719942 - MER102b DNA MER1_type 0 341 84 2129 100 3 7 chr2 40537186 40537476 -212719107 - AluY SINE Alu -17 294 6 2373 100 0 0 chr2 40539116 40539416 -212717167 - AluSx SINE Alu -12 300 1 1077 126 0 60 chr2 40539964 40540146 -212716437 - AluJb SINE Alu -5 307 137 198 0 0 0 chr2 40540146 40540168 -212716415 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2130 73 26 0 chr2 40540171 40540443 -212716140 - AluY SINE Alu -24 287 9 506 280 28 7 chr2 40540512 40540655 -212715928 - MIR SINE MIR -70 192 47 740 293 29 5 chr2 40540700 40540908 -212715675 + MIR SINE MIR 44 256 -6 602 231 133 71 chr2 40541858 40542113 -212714470 - L2 LINE L2 -1 3312 3042 1310 86 145 0 chr2 40543191 40543377 -212713206 - AluSq SINE Alu -15 298 86 979 70 0 0 chr2 40543377 40543492 -212713091 - AluSq/x SINE Alu -163 150 36 365 168 131 9 chr2 40543795 40543902 -212712681 - L1MC5 LINE L1 -35 7926 7807 27 62 0 0 chr2 40545003 40545051 -212711532 + GC_rich Low_complexity Low_complexity 1 48 0 558 318 128 39 chr2 40546073 40546378 -212710205 - L2 LINE L2 0 3272 2941 2232 88 0 32 chr2 40547201 40547509 -212709074 + AluY SINE Alu 1 298 -13 222 346 0 0 chr2 40547570 40547648 -212708935 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 555 189 170 26 chr2 40547868 40548021 -212708562 + MIR SINE MIR 12 186 -76 397 125 159 23 chr2 40548150 40548238 -212708345 + MER5A DNA MER1_type 7 106 -83 3589 86 4 2 chr2 40548303 40548767 -212707816 - Charlie3 DNA MER1_type -4 2706 2242 * 3728 92 24 10 chr2 40548761 40549253 -212707330 - Charlie3 DNA MER1_type -2210 500 2 476 272 48 0 chr2 40549292 40549417 -212707166 - MER5A DNA MER1_type -58 131 1 1998 107 3 14 chr2 40552056 40552347 -212704236 - AluSx SINE Alu -24 288 1 252 0 0 0 chr2 40552404 40552432 -212704151 + (T)n Simple_repeat Simple_repeat 1 28 0 414 286 265 0 chr2 40552588 40552822 -212703761 + L3 LINE CR1 1269 1564 -13 185 284 137 42 chr2 40553520 40553615 -212702968 - L2 LINE L2 -43 3229 3126 213 309 144 10 chr2 40555062 40555159 -212701424 - L2 LINE L2 -14 3258 3149 318 173 0 0 chr2 40555187 40555239 -212701344 + L2 LINE L2 3259 3310 -3 276 53 0 0 chr2 40558379 40558417 -212698166 + (TA)n Simple_repeat Simple_repeat 2 39 0 325 248 80 29 chr2 40560562 40560699 -212695884 + L2 LINE L2 3159 3302 -11 1375 164 31 0 chr2 40560921 40561146 -212695437 - AluJo SINE Alu -77 235 4 399 204 0 61 chr2 40561648 40561746 -212694837 + MER5A DNA MER1_type 42 133 -56 862 97 17 4 chr2 40561747 40561881 -212694702 - L1PA15 LINE L1 -9 6159 6020 2607 207 120 127 chr2 40562968 40563420 -212693163 + L2 LINE L2 1610 2063 -1250 949 124 12 43 chr2 40563420 40563581 -212693002 - FAM SINE Alu 0 49 1 2607 207 120 127 chr2 40563581 40564681 -212691902 + L2 LINE L2 2063 3313 0 298 297 127 0 chr2 40564860 40564978 -212691605 - MIR SINE MIR -5 257 125 326 306 81 0 chr2 40565440 40565551 -212691032 + MIR3 SINE MIR 81 200 -8 1244 181 0 5 chr2 40570940 40571150 -212685433 - AluJo SINE Alu -19 293 85 541 231 135 6 chr2 40575473 40575629 -212680954 - MER5B DNA MER1_type -1 177 2 655 188 14 62 chr2 40577428 40577572 -212679011 + FLAM_C SINE Alu 6 142 -1 1948 156 0 3 chr2 40577634 40577929 -212678654 - AluJo SINE Alu -18 294 1 267 296 82 10 chr2 40578124 40578222 -212678361 - MIR SINE MIR -142 120 16 21 0 0 0 chr2 40578433 40578454 -212678129 + AT_rich Low_complexity Low_complexity 1 21 0 1622 147 83 7 chr2 40578489 40578789 -212677794 + MER33 DNA MER1_type 2 324 0 1194 171 118 0 chr2 40579003 40579214 -212677369 - MER46A DNA MER2_type 0 236 1 2022 108 7 24 chr2 40580560 40580857 -212675726 - AluSx SINE Alu -19 293 2 24 32 0 0 chr2 40581524 40581555 -212675028 + AT_rich Low_complexity Low_complexity 1 31 0 296 98 20 20 chr2 40582088 40582139 -212674444 + L1MDa LINE L1 1800 1850 -4690 27 0 0 0 chr2 40582699 40582726 -212673857 + AT_rich Low_complexity Low_complexity 1 27 0 2240 87 0 4 chr2 40582736 40583012 -212673571 - AluSx SINE Alu -30 282 8 582 210 114 30 chr2 40583023 40583190 -212673393 + MIR SINE MIR 82 262 0 181 317 23 153 chr2 40583289 40583807 -212672776 - L2 LINE L2 -1 3271 2821 364 305 115 32 chr2 40584350 40584629 -212671954 - L2 LINE L2 -596 2718 2417 273 177 65 16 chr2 40584729 40584791 -212671792 - Charlie7 DNA MER1_type 0 2612 2548 323 196 78 10 chr2 40584868 40584970 -212671613 - Charlie7 DNA MER1_type -2468 144 36 272 342 29 96 chr2 40585030 40585302 -212671281 + L2 LINE L2 3018 3271 -1 1874 158 0 14 chr2 40585540 40585831 -212670752 - AluSx SINE Alu -25 287 1 2230 82 10 30 chr2 40586503 40586806 -212669777 + AluSq SINE Alu 1 297 -16 294 300 91 0 chr2 40586994 40587104 -212669479 + L2 LINE L2 3153 3272 0 1843 167 0 7 chr2 40587251 40587550 -212669033 + AluJb SINE Alu 1 297 -15 1017 179 27 49 chr2 40588295 40588519 -212668064 - MER20 DNA MER1_type 0 219 1 2246 68 44 17 chr2 40588602 40588897 -212667686 + AluY SINE Alu 1 303 -8 231 271 103 65 chr2 40589227 40589489 -212667094 + L1ME4a LINE L1 5354 5625 -496 484 188 0 12 chr2 40589494 40589574 -212667009 - MER44D DNA MER2_type -1 704 626 216 97 0 0 chr2 40589574 40589605 -212666978 + (CATA)n Simple_repeat Simple_repeat 2 32 0 646 171 137 0 chr2 40589648 40589765 -212666818 - MER44D DNA MER2_type -206 403 1 377 272 99 9 chr2 40589766 40589998 -212666585 + L1ME4a LINE L1 5628 5880 -241 21 71 0 0 chr2 40591410 40591452 -212665131 + AT_rich Low_complexity Low_complexity 1 42 0 365 43 0 0 chr2 40592148 40592195 -212664388 - MADE1 DNA Mariner -33 47 1 2426 265 141 35 chr2 40592219 40592277 -212664306 + L1M4b LINE L1 11 61 -6798 288 111 0 0 chr2 40592277 40592322 -212664261 + (CA)n Simple_repeat Simple_repeat 2 46 0 2426 265 141 35 chr2 40592322 40593238 -212663345 + L1M4b LINE L1 61 1088 -5771 1508 199 8 63 chr2 40593284 40593752 -212662831 + L1M4b LINE L1 1290 1733 -5122 631 233 75 75 chr2 40593760 40594095 -212662488 + L1M4b LINE L1 2366 2700 -4438 368 269 47 103 chr2 40594180 40594500 -212662083 + L1M4b LINE L1 2617 2918 -4041 2280 122 0 0 chr2 40594502 40594813 -212661770 + AluSx SINE Alu 1 311 -1 992 188 18 0 chr2 40594820 40594990 -212661593 + AluSg/x SINE Alu 128 300 -10 2271 106 0 16 chr2 40595353 40595665 -212660918 - AluSq SINE Alu -6 307 1 689 240 73 34 chr2 40596166 40596370 -212660213 - MIR SINE MIR -3 259 48 258 298 64 11 chr2 40596449 40596543 -212660040 - MIR SINE MIR -28 234 136 43 35 0 0 chr2 40596826 40596883 -212659700 + AT_rich Low_complexity Low_complexity 1 57 0 519 339 32 21 chr2 40597391 40597580 -212659003 - MIR3 SINE MIR 0 208 18 28 0 0 0 chr2 40598625 40598653 -212657930 + AT_rich Low_complexity Low_complexity 1 28 0 26 50 0 0 chr2 40599185 40599225 -212657358 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr2 40600271 40600295 -212656288 + (T)n Simple_repeat Simple_repeat 1 24 0 315 304 27 27 chr2 40601572 40601684 -212654899 - MIR SINE MIR -76 132 21 24 0 0 0 chr2 40604201 40604225 -212652358 + AT_rich Low_complexity Low_complexity 1 24 0 220 386 44 0 chr2 40604551 40604665 -212651918 + MIR3 SINE MIR 37 155 -53 21 57 0 0 chr2 40605425 40605460 -212651123 + AT_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr2 40605994 40606016 -212650567 + (A)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr2 40606652 40606677 -212649906 + AT_rich Low_complexity Low_complexity 1 25 0 370 241 79 65 chr2 40609077 40609218 -212647365 + MIR SINE MIR 38 178 -62 502 191 0 0 chr2 40609591 40609675 -212646908 + AluJ/FLAM SINE Alu 1 84 -228 22 35 0 0 chr2 40609682 40609711 -212646872 + AT_rich Low_complexity Low_complexity 1 29 0 1959 144 0 32 chr2 40609815 40610128 -212646455 - AluSx SINE Alu -9 303 1 2454 88 0 0 chr2 40610543 40610851 -212645732 + AluSg SINE Alu 1 308 -2 1093 92 61 0 chr2 40611232 40611395 -212645188 + MER30 DNA MER1_type 1 173 -57 1950 108 76 7 chr2 40612299 40612576 -212644007 - AluSg SINE Alu -14 296 1 21 0 0 0 chr2 40613257 40613278 -212643305 + AT_rich Low_complexity Low_complexity 1 21 0 1889 163 10 3 chr2 40613812 40614119 -212642464 + AluJb SINE Alu 1 309 -3 1657 180 20 16 chr2 40614355 40614661 -212641922 + AluJo SINE Alu 3 309 -3 204 97 0 0 chr2 40614698 40614729 -212641854 + (A)n Simple_repeat Simple_repeat 1 31 0 1722 180 3 20 chr2 40614750 40615044 -212641539 + AluJo SINE Alu 1 289 -23 1847 199 16 59 chr2 40615156 40615644 -212640939 + MLT1C LTR MaLR 1 467 0 1891 134 22 0 chr2 40615916 40616219 -212640364 + AluSx SINE Alu 1 309 0 1648 154 60 6 chr2 40616474 40616806 -212639777 - L1MA8 LINE L1 0 6291 5942 296 314 132 0 chr2 40616970 40617091 -212639492 - L2 LINE L2 0 3272 3136 1822 115 4 19 chr2 40617149 40617410 -212639173 + AluSx SINE Alu 3 259 -53 1076 133 0 0 chr2 40617530 40617688 -212638895 - AluSp SINE Alu -4 309 152 1817 157 7 10 chr2 40618005 40618304 -212638279 - AluJo SINE Alu -13 299 2 243 167 0 0 chr2 40619428 40619494 -212637089 + A-rich Low_complexity Low_complexity 1 66 0 1655 146 0 79 chr2 40620822 40621041 -212635542 - AluJb SINE Alu -21 291 103 2458 53 0 7 chr2 40621041 40621343 -212635240 - AluY SINE Alu -11 300 1 1655 146 0 79 chr2 40621343 40621439 -212635144 - AluJb SINE Alu -209 103 1 198 303 49 74 chr2 40621457 40621579 -212635004 + MIR3 SINE MIR 8 126 -82 244 223 91 22 chr2 40621915 40622021 -212634562 - L1MC/D LINE L1 -360 5804 5691 907 151 102 38 chr2 40622031 40622217 -212634366 + Tigger1 DNA MER2_type 1 198 -2220 7846 116 45 14 chr2 40622219 40622922 -212633661 + Tigger1 DNA MER2_type 1125 1884 -534 2445 75 0 0 chr2 40622922 40623217 -212633366 + AluSc SINE Alu 1 295 -14 7846 116 45 14 chr2 40623217 40623769 -212632814 + Tigger1 DNA MER2_type 1884 2418 0 585 250 62 40 chr2 40623834 40624110 -212632473 - L1MC/D LINE L1 -588 5574 5293 1693 177 16 31 chr2 40624115 40624471 -212632112 - L1MB8 LINE L1 -1 6177 5826 2466 64 0 19 chr2 40624471 40624785 -212631798 - AluY SINE Alu -3 308 1 1693 177 16 31 chr2 40624785 40624813 -212631770 - L1MB8 LINE L1 -352 5826 5799 3590 149 43 34 chr2 40624813 40625538 -212631045 - L1MB4 LINE L1 0 6180 5428 1153 186 10 0 chr2 40625540 40625739 -212630844 - AluJo SINE Alu -25 287 87 1659 154 87 4 chr2 40625739 40626188 -212630395 - L1MB4 LINE L1 -743 5403 4941 813 277 140 67 chr2 40626204 40626860 -212629723 - L1MC/D LINE L1 -960 5186 4579 2172 109 0 3 chr2 40626860 40627171 -212629412 - AluSg SINE Alu 0 310 1 813 277 140 67 chr2 40627171 40627702 -212628881 - L1MC/D LINE L1 -1567 4579 3912 1206 177 72 35 chr2 40628005 40628362 -212628221 - MSTC LTR MaLR -12 416 1 1500 160 21 0 chr2 40628543 40628780 -212627803 + AluSx SINE Alu 1 242 -70 318 347 72 0 chr2 40628821 40628988 -212627595 - L1MC/D LINE L1 -2968 3178 3000 268 204 0 19 chr2 40628989 40629043 -212627540 + MSTC LTR MaLR 23 75 -353 1202 180 0 84 chr2 40629046 40629307 -212627276 - MER8 DNA MER2_type 0 239 1 198 167 0 0 chr2 40629310 40629346 -212627237 + (CA)n Simple_repeat Simple_repeat 2 37 0 1111 171 90 66 chr2 40629349 40629683 -212626900 + MER2 DNA MER2_type 3 344 0 366 23 0 0 chr2 40629696 40629739 -212626844 + (GA)n Simple_repeat Simple_repeat 1 43 0 270 0 0 0 chr2 40629738 40629768 -212626815 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 455 291 68 29 chr2 40629778 40630163 -212626420 - L1MC/D LINE L1 -3525 2621 2212 2146 115 3 16 chr2 40630163 40630476 -212626107 - AluSg SINE Alu -1 309 1 455 291 68 29 chr2 40630476 40630572 -212626011 - L1MC/D LINE L1 -3934 2212 2121 26 0 0 0 chr2 40630923 40630949 -212625634 + AT_rich Low_complexity Low_complexity 1 26 0 2242 90 10 0 chr2 40630960 40631260 -212625323 - AluSx SINE Alu -4 308 6 1354 207 242 22 chr2 40631470 40632064 -212624519 - L1ME3 LINE L1 -47 6115 5315 1867 155 16 10 chr2 40632128 40632431 -212624152 - AluSx SINE Alu -7 305 1 874 268 15 7 chr2 40632431 40632696 -212623887 - L1ME3 LINE L1 -861 5285 5016 576 289 87 47 chr2 40632693 40632862 -212623721 - L1MEd LINE L1 -880 1610 1449 * 2088 139 0 3 chr2 40632862 40633165 -212623418 - AluSx SINE Alu -10 302 1 576 289 87 47 chr2 40633165 40633399 -212623184 - L1MEd LINE L1 -1041 1449 1226 2191 92 21 0 chr2 40633399 40633681 -212622902 - AluSx SINE Alu -24 288 1 576 289 87 47 chr2 40633681 40633911 -212622672 - L1MEd LINE L1 -1264 1226 859 636 266 33 55 chr2 40634874 40634957 -212621626 - MIR SINE MIR -16 246 163 1170 134 129 0 chr2 40634957 40635166 -212621417 - MER46A DNA MER2_type 0 236 1 636 266 33 55 chr2 40635166 40635324 -212621259 - MIR SINE MIR -99 163 7 1515 166 67 24 chr2 40635955 40636328 -212620255 - Charlie1 DNA MER1_type 0 2761 2373 1007 120 43 128 chr2 40636342 40636600 -212619983 - L1MB7 LINE L1 -16 6168 5933 564 167 0 28 chr2 40636600 40636708 -212619875 - Charlie1 DNA MER1_type -432 2329 2225 2951 198 55 47 chr2 40636779 40637334 -212619249 - L1ME1 LINE L1 -9 6157 5593 2260 98 0 0 chr2 40637334 40637629 -212618954 + AluSx SINE Alu 1 295 -17 2951 198 55 47 chr2 40637629 40637860 -212618723 - L1ME1 LINE L1 -573 5593 5365 505 214 0 17 chr2 40637909 40638026 -212618557 - L1MB8 LINE L1 0 6178 6064 281 338 59 37 chr2 40638345 40638391 -212618192 + L2 LINE L2 3128 3172 -100 2628 37 0 0 chr2 40638391 40638689 -212617894 - AluY SINE Alu -12 299 2 281 338 59 37 chr2 40638689 40638778 -212617805 + L2 LINE L2 3172 3266 -6 337 328 90 21 chr2 40640240 40640429 -212616154 + MIR SINE MIR 12 213 -49 2172 99 44 7 chr2 40640611 40640904 -212615679 + AluSg SINE Alu 1 304 -6 356 273 0 30 chr2 40642350 40642449 -212614134 + MIR SINE MIR 59 154 -108 643 218 68 68 chr2 40644719 40644881 -212611702 + MER112 DNA MER1_type 3 167 -93 2105 130 7 0 chr2 40644881 40645188 -212611395 - AluSx SINE Alu -3 309 1 643 218 68 68 chr2 40645188 40645277 -212611306 + MER112 DNA MER1_type 166 254 -6 189 0 0 0 chr2 40645713 40645734 -212610849 + (A)n Simple_repeat Simple_repeat 1 21 0 22 35 0 0 chr2 40645791 40645820 -212610763 + AT_rich Low_complexity Low_complexity 1 29 0 1762 174 3 19 chr2 40645841 40646151 -212610432 - AluJo SINE Alu -7 305 1 2274 118 0 6 chr2 40646599 40646913 -212609670 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 40647316 40647337 -212609246 + AT_rich Low_complexity Low_complexity 1 21 0 442 154 15 0 chr2 40647462 40647527 -212609056 - MER2 DNA MER2_type 0 345 280 27 29 0 0 chr2 40647527 40647561 -212609022 + AT_rich Low_complexity Low_complexity 1 34 0 998 156 0 13 chr2 40647591 40647745 -212608838 - FRAM SINE Alu -19 157 6 1065 158 0 16 chr2 40647750 40647933 -212608650 - MER2 DNA MER2_type -164 181 2 1674 164 29 32 chr2 40648289 40648600 -212607983 - AluJb SINE Alu -2 310 1 691 167 54 18 chr2 40648615 40648783 -212607800 - L1MA8 LINE L1 -7 6284 6111 508 117 26 0 chr2 40648791 40648868 -212607715 - MLT1A1 LTR MaLR -286 79 1 514 172 66 73 chr2 40648982 40649133 -212607450 - L1MA8 LINE L1 -173 6118 5969 2062 125 3 32 chr2 40649206 40649519 -212607064 - AluSx SINE Alu -6 306 3 478 143 26 0 chr2 40649724 40649801 -212606782 + MLT1A1 LTR MaLR 1 79 -286 346 250 113 0 chr2 40650148 40650228 -212606355 + MIR SINE MIR 37 125 -137 581 231 54 8 chr2 40650231 40650361 -212606222 - L2 LINE L2 -2 3311 3176 320 188 72 0 chr2 40651455 40651524 -212605059 - MER46A DNA MER2_type -90 146 73 1444 168 0 13 chr2 40651539 40651777 -212604806 - AluJb SINE Alu -77 235 1 939 161 78 22 chr2 40651777 40651957 -212604626 + MER46A DNA MER2_type 47 236 0 2200 106 0 0 chr2 40652300 40652593 -212603990 + AluSx SINE Alu 1 293 -19 195 284 25 37 chr2 40652950 40653031 -212603552 + L2 LINE L2 3174 3253 -19 21 0 0 0 chr2 40653152 40653173 -212603410 + AT_rich Low_complexity Low_complexity 1 21 0 1227 194 0 103 chr2 40653529 40653858 -212602725 + AluJo SINE Alu 3 297 -15 200 244 0 0 chr2 40653889 40653930 -212602653 + (TA)n Simple_repeat Simple_repeat 2 42 0 2267 101 0 0 chr2 40654015 40654311 -212602272 - AluSx SINE Alu -16 296 1 214 196 130 0 chr2 40654336 40654382 -212602201 - MIR SINE MIR -121 141 90 180 369 68 19 chr2 40654450 40654553 -212602030 - MIR3 SINE MIR -99 109 2 263 307 160 31 chr2 40654797 40655116 -212601467 + L2 LINE L2 1986 2345 -969 266 319 14 0 chr2 40655264 40655333 -212601250 - L3 LINE CR1 -1 1576 1507 2154 111 0 17 chr2 40655333 40655631 -212600952 - AluSx SINE Alu -19 293 1 310 333 72 0 chr2 40656499 40656610 -212599973 - L2 LINE L2 -2 3311 3193 292 40 140 0 chr2 40657761 40657811 -212598772 - MADE1 DNA Mariner -23 57 1 2201 121 0 0 chr2 40658531 40658837 -212597746 + AluSx SINE Alu 1 306 -6 818 120 96 0 chr2 40658838 40658963 -212597620 + AluSg/x SINE Alu 82 218 -94 2315 105 3 0 chr2 40659049 40659355 -212597228 + AluSp SINE Alu 1 307 -6 194 325 103 8 chr2 40659744 40659861 -212596722 - L2 LINE L2 -876 2438 2311 571 246 0 0 chr2 40659991 40660105 -212596478 + FLAM_A SINE Alu 6 119 -23 394 259 108 25 chr2 40660124 40660440 -212596143 + L1ME3A LINE L1 3174 3515 -2631 1421 241 97 52 chr2 40660545 40660591 -212595992 + L1ME3A LINE L1 3713 3755 -2391 1566 187 42 3 chr2 40660591 40660875 -212595708 + AluJb SINE Alu 1 295 -17 1421 241 97 52 chr2 40660875 40661524 -212595059 + L1ME3A LINE L1 3755 4447 -1699 1832 138 81 0 chr2 40661524 40661807 -212594776 + AluSx SINE Alu 1 306 -6 1421 241 97 52 chr2 40661807 40661865 -212594718 + L1ME3A LINE L1 4447 4501 -1645 685 276 113 48 chr2 40661883 40662913 -212593670 + L1ME3A LINE L1 4540 5647 -515 1670 170 56 25 chr2 40662919 40663242 -212593341 + MER1B DNA MER1_type 2 334 -5 2343 97 0 7 chr2 40663243 40663551 -212593032 + AluSc SINE Alu 1 306 -3 375 281 22 5 chr2 40663619 40663804 -212592779 + L1ME3A LINE L1 5770 5957 -213 2523 79 0 0 chr2 40663951 40664256 -212592327 - AluSg SINE Alu -5 305 1 485 121 0 60 chr2 40664321 40664404 -212592179 - MER1A DNA MER1_type 0 539 462 3613 107 25 4 chr2 40664418 40664934 -212591649 - MER1A DNA MER1_type 0 527 1 1372 153 120 29 chr2 40665367 40665642 -212590941 + AluJo SINE Alu 1 300 -12 1926 139 7 3 chr2 40665701 40666004 -212590579 + AluSx SINE Alu 1 304 -8 2051 119 31 0 chr2 40666007 40666293 -212590290 + AluSx SINE Alu 2 296 -16 26 50 0 0 chr2 40666302 40666342 -212590241 + AT_rich Low_complexity Low_complexity 1 40 0 1716 99 48 4 chr2 40666387 40666659 -212589924 - L1MA2 LINE L1 -7 6297 6014 267 257 95 0 chr2 40666769 40666843 -212589740 - L2 LINE L2 -37 3276 3196 631 133 29 9 chr2 40667053 40667158 -212589425 + U6 snRNA snRNA 1 107 0 2269 174 45 13 chr2 40667230 40667677 -212588906 - MER65C LTR ERV1 0 461 1 187 355 33 16 chr2 40667920 40668041 -212588542 - L2 LINE L2 -1385 1929 1807 592 265 168 4 chr2 40668068 40668312 -212588271 + L1ME LINE L1 5508 5801 -320 2407 111 40 8 chr2 40668312 40668690 -212587893 + MLT1B LTR MaLR 1 390 0 592 265 168 4 chr2 40668690 40668713 -212587870 + L1ME LINE L1 5801 5819 -302 36 0 0 0 chr2 40669072 40669108 -212587475 + AT_rich Low_complexity Low_complexity 1 36 0 1769 166 3 7 chr2 40669502 40669804 -212586779 - AluJo SINE Alu -3 309 9 230 263 62 25 chr2 40670290 40670370 -212586213 - L2 LINE L2 -69 3203 3121 271 356 29 0 chr2 40670413 40670517 -212586066 + MIR SINE MIR 9 115 -147 334 269 53 76 chr2 40670792 40670963 -212585620 - L2 LINE L2 -870 2444 2278 2248 108 0 3 chr2 40671281 40671576 -212585007 - AluSx SINE Alu -16 296 3 282 308 99 16 chr2 40672005 40672136 -212584447 + MIR SINE MIR 66 218 -44 1615 159 33 33 chr2 40672136 40672437 -212584146 - AluJb SINE Alu -11 301 1 282 308 99 16 chr2 40672437 40672487 -212584096 + MIR SINE MIR 218 262 0 348 250 43 86 chr2 40672652 40672768 -212583815 - MER5A DNA MER1_type 0 189 79 3773 168 57 22 chr2 40672783 40673539 -212583044 - L1MB3 LINE L1 0 6183 5402 1939 139 9 22 chr2 40673706 40674023 -212582560 + AluSq SINE Alu 1 313 0 649 165 0 8 chr2 40674023 40674144 -212582439 + L1MD3 LINE L1 6914 7033 -962 2036 134 0 42 chr2 40674308 40674621 -212581962 + AluSx SINE Alu 1 300 -12 2138 113 0 0 chr2 40674877 40675191 -212581392 + AluSx SINE Alu 1 314 0 239 276 0 147 chr2 40675283 40675331 -212581252 - MER5A DNA MER1_type -80 109 86 2162 133 0 0 chr2 40675331 40675632 -212580951 - AluSx SINE Alu -11 301 1 239 276 0 147 chr2 40675632 40675699 -212580884 - MER5A DNA MER1_type -103 86 11 474 296 210 12 chr2 40676019 40676357 -212580226 + L2 LINE L2 1647 2051 -1263 340 314 230 17 chr2 40676363 40676659 -212579924 + L2 LINE L2 2529 2887 -427 520 143 0 0 chr2 40676659 40676743 -212579840 - AluJ/FRAM SINE Alu -8 304 221 800 293 80 27 chr2 40676743 40677118 -212579465 + L2 LINE L2 2879 3273 -40 496 241 126 53 chr2 40678056 40678263 -212578320 - L2 LINE L2 -357 2957 2736 1417 151 92 126 chr2 40678310 40678829 -212577754 + Charlie1 DNA MER1_type 2217 2718 -43 2121 87 0 28 chr2 40678829 40679147 -212577436 + AluSg1 SINE Alu 1 310 0 1417 151 92 126 chr2 40679147 40679189 -212577394 + Charlie1 DNA MER1_type 2718 2760 -1 2490 57 0 3 chr2 40681067 40681363 -212575220 + AluY SINE Alu 1 295 -16 202 250 0 54 chr2 40681495 40681551 -212575032 + MIR3 SINE MIR 141 193 -15 742 229 54 12 chr2 40681829 40681995 -212574588 + MER5A DNA MER1_type 17 189 0 1956 151 0 22 chr2 40682014 40682326 -212574257 - AluSx SINE Alu -5 307 3 24 53 0 0 chr2 40682400 40682438 -212574145 + AT_rich Low_complexity Low_complexity 1 38 0 2189 161 56 16 chr2 40682998 40683071 -212573512 + L1MB8 LINE L1 5208 5277 -901 2228 107 0 0 chr2 40683071 40683362 -212573221 + AluY SINE Alu 1 291 -20 2189 161 56 16 chr2 40683362 40684032 -212572551 + L1MB8 LINE L1 5277 6126 -52 843 173 0 0 chr2 40684049 40684205 -212572378 + L1MA9 LINE L1 5088 5243 -903 1875 106 84 0 chr2 40684205 40684480 -212572103 - AluSx SINE Alu -14 298 1 3396 138 43 20 chr2 40684489 40685091 -212571492 + L1MA9 LINE L1 5346 5961 -351 1821 177 0 10 chr2 40685097 40685397 -212571186 + AluJb SINE Alu 1 297 -15 2104 139 57 63 chr2 40685450 40685875 -212570708 - MSTB LTR MaLR -4 422 1 2410 92 3 0 chr2 40686389 40686694 -212569889 + AluSg SINE Alu 1 306 -4 1686 180 9 35 chr2 40686706 40687022 -212569561 + AluJb SINE Alu 3 310 -2 1948 135 3 44 chr2 40687126 40687445 -212569138 + AluJb SINE Alu 1 306 -6 4075 193 39 56 chr2 40687452 40688463 -212568120 + L1MB4 LINE L1 4323 5328 -852 2109 128 0 7 chr2 40688463 40688761 -212567822 + AluSq SINE Alu 3 298 -15 4075 193 39 56 chr2 40688761 40689164 -212567419 + L1MB4 LINE L1 5328 5736 -444 1064 192 0 0 chr2 40689175 40689373 -212567210 + L1MB4 LINE L1 5792 5989 -191 594 156 8 33 chr2 40689377 40689499 -212567084 + L1MB4 LINE L1 6062 6180 0 636 152 72 24 chr2 40689754 40689879 -212566704 - FLAM_C SINE Alu -1 132 2 21 0 0 0 chr2 40690002 40690023 -212566560 + AT_rich Low_complexity Low_complexity 1 21 0 1992 139 3 10 chr2 40690079 40690380 -212566203 + AluSx SINE Alu 1 299 -13 1538 162 0 12 chr2 40690400 40690647 -212565936 + AluJb SINE Alu 3 246 -66 261 0 0 0 chr2 40690648 40690677 -212565906 + (CA)n Simple_repeat Simple_repeat 2 30 0 2837 10 0 3 chr2 40690772 40691082 -212565501 + AluYa5 SINE Alu 1 309 -2 1423 262 79 14 chr2 40691659 40692090 -212564493 + LTR16B LTR ERVL 6 464 0 195 42 0 0 chr2 40692121 40692145 -212564438 + (A)n Simple_repeat Simple_repeat 1 24 0 504 257 162 35 chr2 40692493 40692839 -212563744 + L2 LINE L2 2368 2757 -557 231 114 0 0 chr2 40693005 40693040 -212563543 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 1841 175 0 20 chr2 40693070 40693373 -212563210 + AluJo SINE Alu 1 297 -15 1786 186 0 0 chr2 40693380 40693701 -212562882 + AluJb SINE Alu 1 321 0 285 315 103 30 chr2 40694082 40694285 -212562298 + MIR SINE MIR 31 248 -14 280 192 267 20 chr2 40694334 40694480 -212562103 + L1M4 LINE L1 4663 4844 -1302 498 75 0 0 chr2 40694490 40694557 -212562026 + (TG)n Simple_repeat Simple_repeat 2 68 0 1632 167 62 20 chr2 40694561 40694867 -212561716 + MER2 DNA MER2_type 2 320 -25 402 127 0 0 chr2 40694959 40695014 -212561569 + MER66B LTR ERV1 292 346 -140 325 337 18 18 chr2 40695026 40695195 -212561388 + L1M4 LINE L1 4890 5058 -1088 236 253 60 0 chr2 40695199 40695282 -212561301 + L1M4 LINE L1 5080 5167 -979 971 134 0 0 chr2 40695282 40695416 -212561167 + AluSq/x SINE Alu 1 134 -179 2222 101 10 0 chr2 40695417 40695705 -212560878 + AluSx SINE Alu 1 291 -21 291 247 49 24 chr2 40695724 40695860 -212560723 + L1MC4 LINE L1 7779 8015 -27 1009 172 54 14 chr2 40695965 40696052 -212560531 - AluJo SINE Alu -82 230 148 2612 43 0 13 chr2 40696052 40696356 -212560227 - AluY SINE Alu -11 300 1 1009 172 54 14 chr2 40696356 40696489 -212560094 - AluJo SINE Alu -164 148 1 191 200 32 11 chr2 40696648 40696743 -212559840 + (TA)n Simple_repeat Simple_repeat 2 98 0 475 92 15 0 chr2 40697002 40697067 -212559516 + AluS SINE Alu 2 67 -246 2036 81 0 0 chr2 40697167 40697413 -212559170 - AluSc SINE Alu -63 246 1 514 236 34 91 chr2 40697934 40698142 -212558441 - MIR3 SINE MIR -7 201 6 691 132 9 0 chr2 40698151 40698257 -212558326 - AluSg/x SINE Alu -7 303 197 1599 159 39 12 chr2 40698264 40698521 -212558062 - AluJb SINE Alu -48 264 1 355 74 19 0 chr2 40698599 40698689 -212557894 + Alu SINE Alu 247 337 0 2179 116 7 0 chr2 40698794 40699112 -212557471 - AluSq SINE Alu 0 313 1 27 0 0 0 chr2 40699175 40699202 -212557381 + AT_rich Low_complexity Low_complexity 1 27 0 877 115 0 8 chr2 40699326 40699448 -212557135 + AluSq/x SINE Alu 14 134 -178 2250 95 10 7 chr2 40699577 40699881 -212556702 + AluSx SINE Alu 1 305 -7 360 0 0 0 chr2 40699882 40699922 -212556661 + (TA)n Simple_repeat Simple_repeat 1 40 0 1185 245 77 70 chr2 40699931 40700474 -212556109 - MLT1H LTR MaLR 0 549 3 1889 115 4 4 chr2 40701521 40701774 -212554809 + AluSx SINE Alu 1 253 -59 2272 96 13 0 chr2 40702167 40702470 -212554113 - AluSp SINE Alu -6 307 1 2146 110 3 17 chr2 40702470 40702770 -212553813 - AluSg SINE Alu -14 296 1 186 43 0 0 chr2 40702964 40702987 -212553596 + (GAA)n Simple_repeat Simple_repeat 2 24 0 505 324 55 34 chr2 40702995 40703044 -212553539 - L1MC4 LINE L1 -772 7270 7224 952 183 63 0 chr2 40703044 40703219 -212553364 + MER5A DNA MER1_type 2 187 -2 505 324 55 34 chr2 40703219 40703549 -212553034 - L1MC4 LINE L1 -818 7224 6883 56 55 0 0 chr2 40704197 40704288 -212552295 + GC_rich Low_complexity Low_complexity 1 91 0 252 59 0 0 chr2 40704493 40704527 -212552056 + (CCG)n Simple_repeat Simple_repeat 1 34 0 186 103 0 0 chr2 40704645 40704674 -212551909 + (GA)n Simple_repeat Simple_repeat 1 29 0 180 147 0 0 chr2 40705438 40705472 -212551111 - MIR SINE MIR -63 199 166 2265 98 0 10 chr2 40705670 40705967 -212550616 + AluSq SINE Alu 1 294 -19 294 29 0 0 chr2 40705970 40706005 -212550578 + (CA)n Simple_repeat Simple_repeat 2 36 0 686 86 0 0 chr2 40706010 40706103 -212550480 + AluS SINE Alu 2 94 -219 22 0 0 0 chr2 40706325 40706347 -212550236 + AT_rich Low_complexity Low_complexity 1 22 0 478 173 79 0 chr2 40706374 40706501 -212550082 + L1MB7 LINE L1 6045 6181 -3 1036 90 8 0 chr2 40706559 40706692 -212549891 + AluSq/x SINE Alu 2 135 -178 1953 142 0 0 chr2 40706692 40707003 -212549580 + AluSg SINE Alu 1 311 0 370 203 56 77 chr2 40707366 40707509 -212549074 + L1ME LINE L1 5620 5759 -362 1767 127 82 4 chr2 40707682 40707950 -212548633 - AluSx SINE Alu -23 289 1 502 200 0 0 chr2 40708119 40708204 -212548379 - AluSg/x SINE Alu -38 271 187 293 271 53 68 chr2 40708207 40708258 -212548325 - L1MC4a LINE L1 -1875 5933 5883 2147 145 3 0 chr2 40708258 40708562 -212548021 - AluJb SINE Alu -7 305 1 293 271 53 68 chr2 40708562 40708643 -212547940 - L1MC4a LINE L1 -1925 5883 5803 243 151 41 123 chr2 40708708 40708781 -212547802 + L1ME LINE L1 5830 5896 -225 2024 139 0 0 chr2 40709332 40709612 -212546971 + AluSx SINE Alu 1 280 -32 213 65 0 0 chr2 40709613 40709644 -212546939 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 704 177 0 57 chr2 40709769 40709910 -212546673 - FLAM_C SINE Alu 0 133 1 2438 192 101 9 chr2 40709919 40710456 -212546127 - L1MD3 LINE L1 0 7995 7410 479 197 1 11 chr2 40710457 40710557 -212546026 - MLT1F1 LTR MaLR -442 125 35 336 165 12 47 chr2 40710557 40710642 -212545941 - L1MD3 LINE L1 -879 7116 7035 247 284 136 0 chr2 40710770 40710851 -212545732 + MIR SINE MIR 19 110 -152 236 161 143 0 chr2 40710952 40711008 -212545575 + AluSc SINE Alu 236 299 0 2330 77 10 3 chr2 40711175 40711473 -212545110 - AluSq SINE Alu -13 300 1 266 345 167 19 chr2 40712114 40712378 -212544205 - L2 LINE L2 -4 3268 2966 952 253 39 32 chr2 40712715 40713000 -212543583 - MER102b DNA MER1_type -45 296 10 666 168 82 8 chr2 40715066 40715231 -212541352 + L1ME LINE L1 5634 5806 -358 1229 176 69 50 chr2 40715289 40715449 -212541134 + L1ME1 LINE L1 5657 5812 -354 2062 130 0 70 chr2 40715449 40715780 -212540803 + AluJb SINE Alu 1 308 -4 1229 176 69 50 chr2 40715780 40715939 -212540644 + L1ME1 LINE L1 5812 5980 -186 624 182 0 8 chr2 40715949 40716081 -212540502 + L1MA10 LINE L1 6203 6333 -1 2045 129 27 3 chr2 40716289 40716583 -212540000 + AluSx SINE Alu 1 301 -11 2445 90 6 0 chr2 40716585 40716896 -212539687 + AluSp SINE Alu 1 313 0 1095 189 0 5 chr2 40716907 40717103 -212539480 + AluJb SINE Alu 118 312 0 182 344 109 8 chr2 40717103 40717231 -212539352 - L2 LINE L2 -1321 1993 1853 263 267 208 0 chr2 40717491 40717592 -212538991 - MIR SINE MIR -49 213 92 202 139 0 23 chr2 40717609 40717652 -212538931 + (TTTTTA)n Simple_repeat Simple_repeat 2 43 0 1427 185 58 25 chr2 40717706 40717982 -212538601 + AluJo SINE Alu 2 286 -26 2028 130 13 7 chr2 40718123 40718430 -212538153 - AluSx SINE Alu -3 309 1 227 298 48 65 chr2 40718786 40718910 -212537673 + L2 LINE L2 3192 3313 0 2246 111 3 0 chr2 40719359 40719665 -212536918 + AluSx SINE Alu 6 312 0 2234 77 7 0 chr2 40719667 40719939 -212536644 + AluSq SINE Alu 28 301 -12 1987 121 8 0 chr2 40720610 40720874 -212535709 + AluSx SINE Alu 1 266 -46 275 296 0 10 chr2 40722365 40722463 -212534120 + (TA)n Simple_repeat Simple_repeat 2 98 0 1906 128 24 7 chr2 40722930 40723219 -212533364 - AluJb SINE Alu -17 295 2 966 153 38 0 chr2 40723344 40723501 -212533082 - AluJb SINE Alu -9 303 141 188 256 0 0 chr2 40723672 40723715 -212532868 + MIR SINE MIR 111 153 -55 2215 114 6 22 chr2 40723903 40724218 -212532365 + AluSx SINE Alu 1 310 -2 401 308 27 0 chr2 40724471 40724617 -212531966 + MIR SINE MIR 107 256 -6 1512 133 35 18 chr2 40724683 40724968 -212531615 + L1MA8 LINE L1 6002 6291 0 23 0 0 0 chr2 40726061 40726084 -212530499 + AT_rich Low_complexity Low_complexity 1 23 0 2053 125 7 3 chr2 40726084 40726373 -212530210 - AluSx SINE Alu -22 290 1 303 246 92 42 chr2 40726385 40726527 -212530056 - MIR3 SINE MIR -11 197 49 2210 110 0 0 chr2 40727214 40727496 -212529087 - AluSx SINE Alu -28 284 3 625 90 0 0 chr2 40728012 40728101 -212528482 - AluSx SINE Alu -9 303 215 1176 145 0 0 chr2 40728102 40728268 -212528315 - AluSx SINE Alu -146 166 1 1352 170 112 23 chr2 40728296 40728581 -212528002 - AluJb SINE Alu 0 308 1 2120 138 3 0 chr2 40728757 40729061 -212527522 + AluJb SINE Alu 1 305 -7 991 137 159 56 chr2 40729644 40729874 -212526709 + AluJo SINE Alu 5 268 -34 2237 98 7 10 chr2 40729874 40730171 -212526412 - AluSq SINE Alu -17 296 1 991 137 159 56 chr2 40730171 40730210 -212526373 + AluJo SINE Alu 268 302 0 2487 64 3 22 chr2 40730250 40730564 -212526019 - AluY SINE Alu -2 309 2 2275 53 0 4 chr2 40730674 40730939 -212525644 - AluY SINE Alu -47 264 1 2657 48 0 10 chr2 40731795 40732109 -212524474 - AluY SINE Alu 0 311 1 2134 89 7 0 chr2 40732202 40732535 -212524048 - AluSg SINE Alu 0 335 1 257 299 39 0 chr2 40733000 40733077 -212523506 + MIR SINE MIR 93 172 -90 877 158 0 0 chr2 40733216 40733349 -212523234 + FLAM_C SINE Alu 1 133 -10 1955 106 22 4 chr2 40733353 40733628 -212522955 + AluSx SINE Alu 3 282 -30 572 398 33 18 chr2 40733665 40734060 -212522523 - L2 LINE L2 -1863 1451 1051 207 0 0 0 chr2 40734061 40734084 -212522499 + (TAA)n Simple_repeat Simple_repeat 3 25 0 1997 139 0 40 chr2 40734220 40734543 -212522040 - AluSx SINE Alu -2 310 1 269 304 11 0 chr2 40734581 40734673 -212521910 + L1M4 LINE L1 3745 3837 -2309 1685 245 66 29 chr2 40734722 40735229 -212521354 - MLT1G3 LTR MaLR 0 530 20 3040 174 57 8 chr2 40735233 40735761 -212520822 - MLT2B3 LTR ERVL 0 554 1 25 0 0 0 chr2 40735794 40735819 -212520764 + AT_rich Low_complexity Low_complexity 1 25 0 354 137 0 0 chr2 40735847 40735898 -212520685 - ERVL-B3 LTR ERVL -32 5732 5682 1612 161 49 26 chr2 40735898 40736203 -212520380 + AluJo SINE Alu 1 312 0 230 0 33 0 chr2 40736205 40736235 -212520348 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 7209 133 25 29 chr2 40736240 40736529 -212520054 - ERVL-B3 LTR ERVL -72 5692 5403 1793 165 4 0 chr2 40736529 40736808 -212519775 - AluJb SINE Alu -32 280 1 7209 133 25 29 chr2 40736808 40737697 -212518886 - ERVL-B3 LTR ERVL -361 5403 4519 274 137 118 0 chr2 40737740 40737791 -212518792 - MLT1G3 LTR MaLR -538 57 1 2919 120 3 111 chr2 40737866 40738390 -212518193 + L1MB2 LINE L1 5639 6095 -76 854 61 0 0 chr2 40738390 40738489 -212518094 + HY3 scRNA scRNA 1 99 -2 2919 120 3 111 chr2 40738489 40738549 -212518034 + L1MB2 LINE L1 6095 6160 -11 2092 146 3 0 chr2 40738551 40738853 -212517730 - AluSx SINE Alu -9 303 1 407 276 89 31 chr2 40739303 40739560 -212517023 + L1M4 LINE L1 4179 4450 -1696 2302 97 0 0 chr2 40740209 40740499 -212516084 + AluSg SINE Alu 1 290 -20 256 211 0 0 chr2 40740707 40740759 -212515824 - LTR16A LTR ERVL -8 442 391 2282 68 0 0 chr2 40740759 40741084 -212515499 + AluY SINE Alu 1 325 0 470 276 134 37 chr2 40741084 40741110 -212515473 - L1M4 LINE L1 -1082 5064 5042 2041 68 0 87 chr2 40741110 40741432 -212515151 - AluSc SINE Alu -15 294 1 470 276 134 37 chr2 40741432 40741868 -212514715 - L1M4 LINE L1 -1104 5042 4557 341 337 55 25 chr2 40742539 40742702 -212513881 - L2 LINE L2 -465 2849 2682 257 241 35 0 chr2 40743392 40743450 -212513133 - L3 LINE CR1 -5 1572 1513 562 269 155 63 chr2 40743552 40743660 -212512923 - L2 LINE L2 -1 3312 3215 2255 115 7 0 chr2 40743660 40743964 -212512619 + AluSx SINE Alu 1 306 -6 562 269 155 63 chr2 40743964 40744395 -212512188 - L2 LINE L2 -98 3215 2727 278 234 130 13 chr2 40744397 40744474 -212512109 - L3 LINE CR1 -248 1329 1244 1266 112 0 0 chr2 40744474 40744643 -212511940 + AluSg SINE Alu 1 169 -141 379 215 69 62 chr2 40744745 40744875 -212511708 + MIR SINE MIR 82 212 -50 2238 90 0 27 chr2 40744948 40745248 -212511335 + AluSx SINE Alu 1 292 -20 2267 118 0 0 chr2 40746587 40746892 -212509691 + AluSx SINE Alu 1 305 -7 837 175 36 72 chr2 40747140 40747363 -212509220 - L1ME2 LINE L1 -2 6162 5948 1455 126 51 12 chr2 40747363 40747795 -212508788 - LTR54 LTR ERV1 0 510 1 355 185 92 85 chr2 40747802 40747932 -212508651 - L1ME2 LINE L1 -220 5944 5814 4595 143 27 4 chr2 40747946 40748715 -212507868 - L1MB4 LINE L1 -6 6174 5388 2392 76 0 13 chr2 40748809 40749124 -212507459 - AluY SINE Alu 0 311 1 1555 106 208 0 chr2 40749126 40749371 -212507212 - AluSq SINE Alu -17 296 1 2334 89 0 7 chr2 40749491 40749795 -212506788 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 40749854 40749893 -212506690 + AT_rich Low_complexity Low_complexity 1 39 0 2736 195 52 6 chr2 40750102 40750619 -212505964 - MLT1F LTR MaLR 0 542 2 920 141 0 0 chr2 40750835 40750970 -212505613 + FLAM_C SINE Alu 5 139 -4 1540 155 65 47 chr2 40751387 40751696 -212504887 + AluJo SINE Alu 3 316 0 23 0 0 0 chr2 40751840 40751863 -212504720 + AT_rich Low_complexity Low_complexity 1 23 0 2199 104 7 7 chr2 40752211 40752509 -212504074 - AluSq SINE Alu -15 298 1 1049 98 0 0 chr2 40752523 40752656 -212503927 - AluSq/x SINE Alu -179 133 1 308 269 57 77 chr2 40752781 40752913 -212503670 + MLT1H LTR MaLR 18 151 -398 2164 106 0 7 chr2 40752913 40753206 -212503377 - AluSg SINE Alu -19 291 1 308 269 57 77 chr2 40753206 40753343 -212503240 + MLT1H LTR MaLR 151 330 -219 641 182 94 130 chr2 40753354 40753662 -212502921 + MLT1H1 LTR MaLR 259 555 0 221 245 19 0 chr2 40753741 40753794 -212502789 + GA-rich Low_complexity Low_complexity 1 54 0 243 88 0 0 chr2 40753948 40753982 -212502601 + (T)n Simple_repeat Simple_repeat 1 34 0 623 219 80 110 chr2 40754145 40754446 -212502137 + MLT1I LTR MaLR 101 392 -17 286 277 82 94 chr2 40754466 40754484 -212502099 + HAL1 LINE L1 1434 1451 -1056 1831 147 3 11 chr2 40754484 40754798 -212501785 + AluSx SINE Alu 1 312 0 286 277 82 94 chr2 40754798 40754957 -212501626 + HAL1 LINE L1 1451 1611 -896 616 220 23 15 chr2 40754957 40755089 -212501494 + FLAM_A SINE Alu 1 133 0 286 277 82 94 chr2 40755089 40755165 -212501418 + HAL1 LINE L1 1611 1686 -821 620 283 39 5 chr2 40755281 40755486 -212501097 + L1ME LINE L1 5533 5744 -377 1025 106 0 0 chr2 40755490 40755622 -212500961 + FLAM_C SINE Alu 1 132 -1 283 60 40 20 chr2 40755627 40755677 -212500906 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 796 156 0 0 chr2 40755925 40756047 -212500536 - AluSg/x SINE Alu -1 308 187 248 277 14 85 chr2 40756050 40756109 -212500474 - L1MC4a LINE L1 -1875 5933 5871 1988 166 3 0 chr2 40756109 40756405 -212500178 - AluJb SINE Alu -15 297 1 248 277 14 85 chr2 40756405 40756486 -212500097 - L1MC4a LINE L1 -1937 5871 5803 762 238 21 47 chr2 40757051 40757244 -212499339 + MER5A DNA MER1_type 2 189 0 503 130 272 0 chr2 40757557 40757649 -212498934 + FLAM_C SINE Alu 1 117 -26 2165 120 13 0 chr2 40758122 40758422 -212498161 - AluSx SINE Alu -8 304 1 839 294 54 49 chr2 40758469 40758935 -212497648 + L2 LINE L2 1840 2307 -1007 1351 246 46 11 chr2 40758948 40759298 -212497285 + MLT1C LTR MaLR 1 362 -105 1764 175 7 29 chr2 40759417 40759726 -212496857 - AluJo SINE Alu -10 302 1 2050 103 43 4 chr2 40760435 40760716 -212495867 + AluSc SINE Alu 1 292 -17 426 296 25 27 chr2 40761388 40761569 -212495014 - MER5A DNA MER1_type 0 189 1 333 118 0 0 chr2 40762132 40762183 -212494400 + (TG)n Simple_repeat Simple_repeat 2 52 0 1628 192 3 3 chr2 40762184 40762470 -212494113 - AluJo SINE Alu -26 286 1 21 36 0 0 chr2 40762528 40762556 -212494027 + AT_rich Low_complexity Low_complexity 1 28 0 248 292 0 0 chr2 40762563 40762652 -212493931 + L1MC4 LINE L1 6614 6702 -1340 227 229 0 14 chr2 40762592 40762662 -212493921 - L1MCa LINE L1 -4362 2064 1996 * 268 626 0 11 chr2 40762663 40762837 -212493746 + (TA)n Simple_repeat Simple_repeat 2 173 0 1979 75 21 18 chr2 40762838 40763119 -212493464 - AluY SINE Alu -29 282 1 2159 125 74 11 chr2 40764344 40764697 -212491886 + THE1C LTR MaLR 1 375 0 842 211 6 0 chr2 40764758 40764919 -212491664 + AluJb SINE Alu 137 298 -14 2266 110 0 0 chr2 40765144 40765464 -212491119 + AluSx SINE Alu 1 320 0 2406 84 3 7 chr2 40765639 40765949 -212490634 + AluSc SINE Alu 1 309 0 1242 175 0 10 chr2 40766060 40766266 -212490317 - AluJb SINE Alu -24 288 85 507 224 35 17 chr2 40766267 40766383 -212490200 - MIR SINE MIR -100 162 45 349 327 6 42 chr2 40766667 40766841 -212489742 + MIR SINE MIR 42 206 -56 1547 203 19 25 chr2 40766958 40767278 -212489305 + MER58B DNA MER1_type 24 341 0 33 0 0 0 chr2 40767572 40767605 -212488978 + AT_rich Low_complexity Low_complexity 1 33 0 1894 200 59 41 chr2 40768192 40768476 -212488107 + MLT1C LTR MaLR 1 298 -169 1832 166 20 0 chr2 40768476 40768772 -212487811 + AluSx SINE Alu 1 302 -10 1894 200 59 41 chr2 40768772 40768946 -212487637 + MLT1C LTR MaLR 298 467 0 472 258 52 7 chr2 40769558 40769713 -212486870 - L1ME4a LINE L1 -3 6118 5957 1137 151 9 57 chr2 40769732 40769944 -212486639 - AluJo SINE Alu -23 289 88 372 273 67 7 chr2 40769960 40770110 -212486473 - L1ME4a LINE L1 -205 5916 5758 1888 160 0 10 chr2 40770202 40770509 -212486074 + AluJb SINE Alu 1 304 -8 838 150 8 23 chr2 40770512 40770645 -212485938 + FLAM_C SINE Alu 2 132 -1 2275 88 3 0 chr2 40770716 40771034 -212485549 - AluSp SINE Alu 0 319 1 427 237 130 44 chr2 40771044 40771447 -212485136 - L1ME4a LINE L1 -11 6110 5612 1577 150 20 72 chr2 40771535 40771841 -212484742 + AluJb SINE Alu 1 290 -22 256 217 141 49 chr2 40771867 40772051 -212484532 - L1ME4a LINE L1 -2340 5468 5268 4763 146 26 12 chr2 40772154 40772970 -212483613 - L1MB4 LINE L1 -1 6179 5353 961 169 0 6 chr2 40773001 40773167 -212483416 - AluSg/x SINE Alu -11 301 137 1266 141 0 0 chr2 40773212 40773410 -212483173 + L1PB1 LINE L1 1 198 -6665 * 15643 168 57 26 chr2 40773406 40773972 -212482611 + L1PB1 LINE L1 995 1542 -5325 2188 116 3 0 chr2 40773972 40774266 -212482317 - AluSx SINE Alu -17 295 1 15643 168 57 26 chr2 40774266 40779309 -212477274 + L1PB1 LINE L1 1542 6428 -439 1858 151 0 0 chr2 40779309 40779587 -212476996 + AluSx SINE Alu 1 278 -34 15643 168 57 26 chr2 40779587 40779598 -212476985 + L1PB1 LINE L1 6428 6437 -430 414 0 0 0 chr2 40779598 40779644 -212476939 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 15643 168 57 26 chr2 40779644 40779704 -212476879 + L1PB1 LINE L1 6437 6867 0 1826 194 62 2 chr2 40779711 40780112 -212476471 - L1MB4 LINE L1 -797 5349 4925 381 261 58 7 chr2 40780934 40781072 -212475511 - L1ME4a LINE L1 -199 5922 5778 34 72 0 0 chr2 40782152 40782221 -212474362 + AT_rich Low_complexity Low_complexity 1 69 0 1660 184 16 7 chr2 40782255 40782559 -212474024 + AluJo SINE Alu 1 307 -5 522 191 13 138 chr2 40782775 40782838 -212473745 + MER94 DNA DNA 1 36 -98 2298 75 10 3 chr2 40782838 40783146 -212473437 + AluY SINE Alu 1 310 -1 522 191 13 138 chr2 40783146 40783234 -212473349 + MER94 DNA DNA 36 133 -1 2105 69 9 87 chr2 40783402 40783735 -212472848 - AluSx SINE Alu -3 309 3 182 222 16 79 chr2 40784036 40784099 -212472484 - MIR SINE MIR -40 222 164 1755 171 3 0 chr2 40784459 40784751 -212471832 + AluJb SINE Alu 1 293 -19 2222 115 0 0 chr2 40785175 40785479 -212471104 + AluSx SINE Alu 1 304 -8 28 0 0 0 chr2 40785479 40785507 -212471076 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr2 40785662 40785683 -212470900 + AT_rich Low_complexity Low_complexity 1 21 0 2222 84 7 10 chr2 40785702 40785998 -212470585 - AluSq SINE Alu -18 295 1 189 0 0 0 chr2 40786057 40786078 -212470505 + (T)n Simple_repeat Simple_repeat 1 21 0 1638 185 10 45 chr2 40786374 40786688 -212469895 + AluJb SINE Alu 1 303 -9 433 210 239 36 chr2 40786855 40786993 -212469590 - MER5A DNA MER1_type -2 187 11 2067 134 0 10 chr2 40787354 40787646 -212468937 - AluSx SINE Alu -23 289 1 183 100 0 0 chr2 40787839 40787869 -212468714 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 183 321 75 28 chr2 40787870 40787976 -212468607 - L2 LINE L2 -6 3307 3197 1485 152 95 8 chr2 40788481 40788745 -212467838 + AluJo SINE Alu 1 287 -25 262 212 30 10 chr2 40788748 40788850 -212467733 + L1MC4a LINE L1 6851 6911 -897 349 207 121 4 chr2 40788965 40789100 -212467483 + L1MC4 LINE L1 7085 7233 -728 421 226 48 0 chr2 40789236 40789360 -212467223 + L1MC5 LINE L1 7261 7390 -571 1050 163 0 6 chr2 40789398 40789570 -212467013 + MER5A DNA MER1_type 17 187 -2 2565 54 0 0 chr2 40789590 40789888 -212466695 - AluY SINE Alu -13 298 1 1840 156 3 7 chr2 40790027 40790316 -212466267 - AluSx SINE Alu -24 288 1 698 146 9 0 chr2 40790515 40790625 -212465958 - FLAM_C SINE Alu -18 125 15 181 164 66 0 chr2 40791076 40791137 -212465446 + A-rich Low_complexity Low_complexity 5 69 0 2043 128 0 17 chr2 40791245 40791578 -212465005 - AluSx SINE Alu 0 328 1 305 256 102 34 chr2 40791789 40791965 -212464618 - L1MC/D LINE L1 -2014 5794 5607 522 245 53 50 chr2 40792410 40792712 -212463871 - L1MC/D LINE L1 -575 5587 5285 23 0 0 0 chr2 40792879 40792902 -212463681 + AT_rich Low_complexity Low_complexity 1 23 0 493 218 92 28 chr2 40793378 40793520 -212463063 + MIR SINE MIR 1 151 -111 398 283 254 31 chr2 40793642 40793992 -212462591 - L2 LINE L2 -337 2977 2550 301 213 0 0 chr2 40794589 40794650 -212461933 - MADE1 DNA Mariner 0 80 20 366 329 33 13 chr2 40794897 40795049 -212461534 + L2 LINE L2 2763 2917 -397 2274 95 3 0 chr2 40795049 40795388 -212461195 - AluSp SINE Alu 0 340 1 204 158 0 0 chr2 40795429 40795467 -212461116 + T-rich Low_complexity Low_complexity 4 41 0 2699 151 34 55 chr2 40795503 40795575 -212461008 + MLT2B2 LTR ERVL 2 74 -441 1496 188 27 14 chr2 40795575 40795867 -212460716 + AluJo SINE Alu 2 297 -15 2699 151 34 55 chr2 40795867 40796319 -212460264 + MLT2B2 LTR ERVL 74 515 0 409 306 41 0 chr2 40796397 40796495 -212460088 + L2 LINE L2 3148 3249 -23 263 288 135 0 chr2 40796497 40796608 -212459975 + LTR67 LTR ERVL 432 557 0 1898 149 3 3 chr2 40796757 40797076 -212459507 - AluSx SINE Alu 0 319 1 377 317 56 29 chr2 40797635 40797941 -212458642 + ERVL LTR ERVL 818 1131 -4633 2309 87 10 7 chr2 40797942 40798242 -212458341 - AluSx SINE Alu -11 301 1 2283 89 0 10 chr2 40798332 40798670 -212457913 - AluY SINE Alu 0 335 1 236 283 38 28 chr2 40798790 40798896 -212457687 - HAL1 LINE L1 -2399 108 2 342 309 197 55 chr2 40799095 40799425 -212457158 + L2 LINE L2 2896 3272 0 182 273 61 40 chr2 40799424 40799523 -212457060 - L2 LINE L2 -52 3261 3161 * 1926 142 0 0 chr2 40799663 40799971 -212456612 + AluSx SINE Alu 1 308 0 22 0 0 0 chr2 40800194 40800216 -212456367 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr2 40800301 40800346 -212456237 + AT_rich Low_complexity Low_complexity 1 45 0 789 271 50 34 chr2 40800424 40800942 -212455641 - L1ME4a LINE L1 -237 5884 5351 1669 154 56 0 chr2 40800986 40801253 -212455330 - AluJb SINE Alu -30 282 1 22 35 0 0 chr2 40801382 40801411 -212455172 + AT_rich Low_complexity Low_complexity 1 29 0 423 304 87 33 chr2 40801622 40801854 -212454729 - L1ME4a LINE L1 -1525 4621 4403 1886 144 48 0 chr2 40801854 40802146 -212454437 - AluSx SINE Alu -6 306 1 423 304 87 33 chr2 40802146 40802489 -212454094 - L1ME4a LINE L1 -1743 4403 4015 2093 79 0 22 chr2 40802506 40802773 -212453810 + AluSg1 SINE Alu 31 291 -18 336 40 80 0 chr2 40803774 40803849 -212452734 + (TA)n Simple_repeat Simple_repeat 2 82 0 287 224 0 0 chr2 40804033 40804091 -212452492 + MER94 DNA DNA 75 132 -2 288 248 43 99 chr2 40804101 40804139 -212452444 + MER94 DNA DNA 1 40 -94 1691 135 30 63 chr2 40804139 40804442 -212452141 - AluSx SINE Alu -19 293 1 288 248 43 99 chr2 40804442 40804544 -212452039 + MER94 DNA DNA 40 133 -1 524 188 0 0 chr2 40804845 40804941 -212451642 + FLAM_A SINE Alu 43 138 -4 190 260 73 42 chr2 40805167 40805263 -212451320 - MIR SINE MIR -99 163 65 475 247 187 0 chr2 40805913 40806063 -212450520 + MER5A DNA MER1_type 12 189 0 244 299 11 11 chr2 40806063 40806150 -212450433 + MIR3 SINE MIR 112 198 -10 1714 120 139 0 chr2 40807454 40807713 -212448870 + AluSp SINE Alu 1 295 -18 279 211 70 0 chr2 40808116 40808187 -212448396 - MIR SINE MIR -83 179 104 2191 100 0 7 chr2 40808284 40808573 -212448010 + AluSx SINE Alu 1 287 -25 243 0 0 0 chr2 40808576 40808603 -212447980 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 878 218 0 0 chr2 40809127 40809283 -212447300 + FRAM SINE Alu 1 156 -10 254 353 35 17 chr2 40809758 40809874 -212446709 + L2 LINE L2 2259 2376 -938 2458 90 0 0 chr2 40810120 40810431 -212446152 + AluY SINE Alu 1 311 0 180 71 0 0 chr2 40811236 40811258 -212445325 + (TA)n Simple_repeat Simple_repeat 2 24 0 2281 97 3 7 chr2 40811258 40811568 -212445015 - AluSc SINE Alu 0 309 1 629 284 112 47 chr2 40811769 40812247 -212444336 + HAL1b LINE L1 58 598 -750 1544 182 56 18 chr2 40812247 40812533 -212444050 - AluJo SINE Alu -15 297 1 629 284 112 47 chr2 40812533 40812761 -212443822 + HAL1b LINE L1 598 810 -538 1375 186 4 32 chr2 40812856 40813104 -212443479 + AluJo SINE Alu 39 279 -33 201 94 0 0 chr2 40813109 40813141 -212443442 + (CAA)n Simple_repeat Simple_repeat 2 33 0 271 136 34 17 chr2 40813146 40813205 -212443378 + L1ME1 LINE L1 1020 1079 -5467 1687 246 44 20 chr2 40813241 40813967 -212442616 + L1ME1 LINE L1 1059 1709 -4833 * 5343 190 46 118 chr2 40813961 40814929 -212441654 + L1ME1 LINE L1 3663 4699 -1965 693 202 0 8 chr2 40814929 40815053 -212441530 + FLAM_C SINE Alu 1 123 -20 5343 190 46 118 chr2 40815053 40815504 -212441079 + L1ME1 LINE L1 4699 5181 -1483 1714 176 3 10 chr2 40815504 40815794 -212440789 + AluJo SINE Alu 1 288 -24 5343 190 46 118 chr2 40815794 40816098 -212440485 + L1ME1 LINE L1 5181 5505 -1159 2270 133 0 0 chr2 40816098 40816407 -212440176 - AluSx SINE Alu -3 309 1 5343 190 46 118 chr2 40816407 40817163 -212439420 + L1ME1 LINE L1 5505 6314 -350 2383 90 0 0 chr2 40817163 40817453 -212439130 + AluSx SINE Alu 1 290 -22 5343 190 46 118 chr2 40817453 40817490 -212439093 + L1ME1 LINE L1 6314 6352 -312 1959 84 66 7 chr2 40817490 40817600 -212438983 + AluSx SINE Alu 12 114 -198 261 0 0 0 chr2 40817600 40817629 -212438954 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 1959 84 66 7 chr2 40817629 40817791 -212438792 + AluSx SINE Alu 114 300 -12 5343 190 46 118 chr2 40817791 40818155 -212438428 + L1ME1 LINE L1 6352 6441 -223 1772 191 72 39 chr2 40818163 40818646 -212437937 + L1MC4 LINE L1 7432 7930 -112 1817 132 12 55 chr2 40818836 40819162 -212437421 - AluSx SINE Alu 0 312 1 1946 162 0 13 chr2 40819632 40819946 -212436637 + AluJb SINE Alu 2 311 -1 197 394 41 12 chr2 40820367 40820537 -212436046 - L2 LINE L2 -454 2860 2686 1741 184 17 14 chr2 40821184 40821477 -212435106 - AluJo SINE Alu -18 294 1 755 266 89 5 chr2 40821930 40822144 -212434439 + MIR SINE MIR 1 232 -30 231 284 62 37 chr2 40822456 40822537 -212434046 + MER5A DNA MER1_type 89 171 -18 293 337 11 11 chr2 40822577 40822669 -212433914 - MER5A DNA MER1_type 0 189 98 908 243 18 9 chr2 40823232 40823454 -212433129 - MER58A DNA MER1_type 0 224 1 2118 167 103 11 chr2 40825466 40825932 -212430651 - LTR22 LTR ERVK 0 509 1 203 290 131 70 chr2 40826705 40826919 -212429664 + MIR SINE MIR 10 236 -26 2157 85 0 20 chr2 40827571 40827865 -212428718 - AluSc SINE Alu -21 288 1 535 305 150 9 chr2 40827877 40828090 -212428493 - MIR SINE MIR -18 244 2 839 181 0 0 chr2 40829180 40829313 -212427270 - AluSq/x SINE Alu -180 133 1 446 292 52 14 chr2 40829606 40829760 -212426823 - L1ME LINE L1 -398 5768 5611 468 279 144 15 chr2 40829775 40830116 -212426467 - L1ME LINE L1 -1117 5029 4645 883 135 0 0 chr2 40830133 40830259 -212426324 - FLAM_C SINE Alu -17 126 1 615 294 149 20 chr2 40830260 40831158 -212425425 - L1ME LINE L1 -1488 4658 3645 2070 86 21 0 chr2 40831952 40832231 -212424352 + AluSg SINE Alu 1 285 -25 356 229 14 0 chr2 40833014 40833084 -212423499 + MER5A DNA MER1_type 3 73 -116 812 188 117 56 chr2 40833085 40833282 -212423301 - AluJo SINE Alu -18 294 86 603 277 72 0 chr2 40833302 40833468 -212423115 + MER5A DNA MER1_type 12 189 0 23 33 0 0 chr2 40833874 40833904 -212422679 + AT_rich Low_complexity Low_complexity 1 30 0 1730 173 0 7 chr2 40834206 40834490 -212422093 - AluJo SINE Alu -30 282 1 433 282 138 6 chr2 40835047 40835228 -212421355 - MIR3 SINE MIR -1 207 3 24 32 0 0 chr2 40835388 40835419 -212421164 + AT_rich Low_complexity Low_complexity 1 31 0 664 256 89 31 chr2 40835456 40835935 -212420648 + L1ME3A LINE L1 5377 5952 -218 235 259 36 9 chr2 40836086 40836198 -212420385 - L1M4 LINE L1 -1695 4451 4337 227 344 97 11 chr2 40836758 40836851 -212419732 + L2 LINE L2 3163 3263 -9 1988 102 46 0 chr2 40836897 40837180 -212419403 + AluSx SINE Alu 1 296 -16 2524 26 0 23 chr2 40837347 40837653 -212418930 - AluY SINE Alu -12 299 1 28 61 0 0 chr2 40838784 40838833 -212417750 + AT_rich Low_complexity Low_complexity 1 49 0 206 104 21 42 chr2 40839449 40839497 -212417086 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 2053 110 0 29 chr2 40841464 40841773 -212414810 + AluSg SINE Alu 1 300 -10 228 193 125 68 chr2 40841779 40841867 -212414716 + L1 LINE L1 4951 5043 -1103 1974 138 3 0 chr2 40842398 40842695 -212413888 - AluSx SINE Alu -14 298 1 1883 114 0 4 chr2 40842702 40842966 -212413617 - AluSx SINE Alu 0 312 50 24 0 0 0 chr2 40842989 40843013 -212413570 + AT_rich Low_complexity Low_complexity 1 24 0 590 111 37 56 chr2 40843019 40843127 -212413456 - AluJb SINE Alu -195 117 12 28 0 0 0 chr2 40843328 40843356 -212413227 + AT_rich Low_complexity Low_complexity 1 28 0 220 211 237 0 chr2 40843429 40843505 -212413078 - MIR SINE MIR -12 250 157 1010 134 0 0 chr2 40843545 40843694 -212412889 - AluSg/x SINE Alu -8 304 156 395 299 134 0 chr2 40844558 40844715 -212411868 - MIR SINE MIR -13 249 72 293 368 0 21 chr2 40845119 40845214 -212411369 - MIR SINE MIR -149 113 21 1742 164 0 18 chr2 40845683 40845969 -212410614 - AluJo SINE Alu -29 283 3 21 57 0 0 chr2 40847136 40847171 -212409412 + AT_rich Low_complexity Low_complexity 1 35 0 970 188 21 5 chr2 40847307 40847493 -212409090 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr2 40847737 40847758 -212408825 + AT_rich Low_complexity Low_complexity 1 21 0 2432 64 0 13 chr2 40848281 40848594 -212407989 - AluY SINE Alu -2 309 1 578 267 160 11 chr2 40848739 40848926 -212407657 + MIR SINE MIR 44 258 -4 1642 174 20 3 chr2 40849279 40849578 -212407005 + AluJb SINE Alu 1 304 -8 2161 118 3 0 chr2 40849940 40850246 -212406337 - AluSx SINE Alu -5 307 1 263 318 78 36 chr2 40850291 40850483 -212406100 + L2 LINE L2 2325 2524 -790 958 286 20 8 chr2 40850544 40850799 -212405784 + MIR SINE MIR 3 260 -2 294 322 23 0 chr2 40850822 40850909 -212405674 - MER20B DNA MER1_type -642 141 53 1035 161 16 10 chr2 40850909 40851101 -212405482 + L1MB8 LINE L1 5980 6172 -6 287 292 166 86 chr2 40851276 40851625 -212404958 + L2 LINE L2 2844 3220 -52 2185 109 0 3 chr2 40851646 40851939 -212404644 - AluSq SINE Alu -20 293 2 569 125 240 0 chr2 40851970 40852074 -212404509 + AluSg SINE Alu 5 133 -177 1939 113 36 0 chr2 40852074 40852383 -212404200 + AluSq SINE Alu 1 319 0 21 57 0 0 chr2 40852441 40852476 -212404107 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 40852594 40852615 -212403968 + AT_rich Low_complexity Low_complexity 1 21 0 474 164 58 10 chr2 40853136 40853240 -212403343 - MER50 LTR ERV1 -135 599 491 183 358 114 32 chr2 40853364 40853487 -212403096 + MIR SINE MIR 16 148 -114 1497 190 13 20 chr2 40853748 40854048 -212402535 + AluJo SINE Alu 6 303 -9 23 0 0 0 chr2 40854210 40854233 -212402350 + AT_rich Low_complexity Low_complexity 1 23 0 53 49 0 0 chr2 40855841 40855922 -212400661 + AT_rich Low_complexity Low_complexity 1 81 0 2033 125 7 10 chr2 40855986 40856290 -212400293 + AluSx SINE Alu 1 303 -9 1139 155 0 0 chr2 40856293 40856454 -212400129 + AluSx SINE Alu 4 164 -148 456 268 121 60 chr2 40857017 40857720 -212398863 - L1ME3A LINE L1 -318 5852 5131 21 71 0 0 chr2 40858156 40858198 -212398385 + AT_rich Low_complexity Low_complexity 1 42 0 1969 142 10 0 chr2 40858226 40858535 -212398048 - AluSx SINE Alu 0 312 1 24 0 0 51 chr2 40858615 40858638 -212397945 + AT_rich Low_complexity Low_complexity 1 24 -13 2190 100 0 0 chr2 40858638 40858953 -212397630 + AluSg SINE Alu 1 315 0 24 0 0 51 chr2 40858953 40858967 -212397616 + AT_rich Low_complexity Low_complexity 24 37 0 1587 181 4 7 chr2 40858974 40859250 -212397333 - AluJo SINE Alu -21 291 17 2116 122 9 32 chr2 40860141 40860486 -212396097 - MER1B DNA MER1_type 0 337 1 2129 102 3 33 chr2 40861373 40861677 -212394906 - AluSq SINE Alu -18 295 1 2284 64 0 0 chr2 40862845 40863153 -212393430 + AluY SINE Alu 1 308 0 24 85 0 0 chr2 40863633 40863692 -212392891 + AT_rich Low_complexity Low_complexity 1 59 0 2096 114 7 7 chr2 40863877 40864185 -212392398 + AluSx SINE Alu 1 308 -4 2461 105 18 52 chr2 40864591 40864863 -212391720 + L1MA5A LINE L1 5853 6104 -193 1887 97 60 43 chr2 40864863 40865162 -212391421 + AluY SINE Alu 1 304 -7 2461 105 18 52 chr2 40865162 40865347 -212391236 + L1MA5A LINE L1 6104 6294 -3 1558 153 41 17 chr2 40865678 40865972 -212390611 + AluJb SINE Alu 1 301 -11 219 235 0 20 chr2 40865999 40866050 -212390533 - MIR SINE MIR -127 135 86 1386 204 80 47 chr2 40866327 40866689 -212389894 + MLT1B LTR MaLR 5 378 -12 865 148 39 13 chr2 40867052 40867207 -212389376 + FRAM SINE Alu 2 160 -6 539 364 18 19 chr2 40868590 40868840 -212387743 + MIR SINE MIR 6 252 -10 1433 194 46 28 chr2 40868879 40869204 -212387379 + Charlie1b DNA MER1_type 2 332 -191 751 177 83 0 chr2 40869382 40869574 -212387009 + Charlie1b DNA MER1_type 316 523 0 2028 123 7 26 chr2 40869790 40870098 -212386485 - AluSx SINE Alu -10 302 1 385 259 176 0 chr2 40870877 40871047 -212385536 - MIR SINE MIR 0 262 63 2342 92 0 0 chr2 40871187 40871492 -212385091 - AluSq SINE Alu -8 305 1 1957 117 10 10 chr2 40872757 40873057 -212383526 + AluSq SINE Alu 2 301 -12 216 338 14 0 chr2 40873258 40873329 -212383254 + L2 LINE L2 3185 3256 -16 25 0 0 0 chr2 40873739 40873764 -212382819 + AT_rich Low_complexity Low_complexity 1 25 0 25 31 0 0 chr2 40873933 40873965 -212382618 + AT_rich Low_complexity Low_complexity 1 32 0 196 292 82 124 chr2 40874775 40875042 -212381541 + L2 LINE L2 3008 3263 -9 2388 67 0 13 chr2 40875816 40876129 -212380454 + AluSc SINE Alu 1 309 0 2036 126 7 10 chr2 40877607 40877909 -212378674 - AluSx SINE Alu -9 303 3 3845 147 38 35 chr2 40878578 40879315 -212377268 + L1MB3 LINE L1 5445 6183 0 513 299 242 5 chr2 40879414 40879625 -212376958 + MIR SINE MIR 2 262 0 2329 84 3 3 chr2 40879905 40880202 -212376381 - AluSc SINE Alu -12 297 1 276 203 49 32 chr2 40881548 40881671 -212374912 + (TATATG)n Simple_repeat Simple_repeat 4 128 0 29 0 0 0 chr2 40883024 40883053 -212373530 + AT_rich Low_complexity Low_complexity 1 29 0 1134 190 4 18 chr2 40883198 40883424 -212373159 - AluJo SINE Alu -12 300 78 2381 74 0 3 chr2 40883623 40883932 -212372651 - AluY SINE Alu -3 308 1 5193 124 37 37 chr2 40884066 40884988 -212371595 - L1MA4 LINE L1 -20 6280 5359 2177 106 0 3 chr2 40885150 40885453 -212371130 - AluSx SINE Alu -10 302 1 1612 189 174 21 chr2 40885508 40885932 -212370651 + MLT1F LTR MaLR 1 489 -53 339 291 108 7 chr2 40885940 40886088 -212370495 + L1MEc LINE L1 1655 1817 -4579 296 221 59 0 chr2 40886159 40886227 -212370356 + MLT1F LTR MaLR 496 567 0 204 358 49 12 chr2 40886956 40887037 -212369546 + L2 LINE L2 3103 3186 -86 1350 121 14 14 chr2 40887286 40887509 -212369074 - L1PA13 LINE L1 0 6163 5941 438 130 11 22 chr2 40887518 40887610 -212368973 + CT-rich Low_complexity Low_complexity 1 91 0 1765 138 0 8 chr2 40887620 40887888 -212368695 - AluSx SINE Alu -46 266 1 1858 164 3 0 chr2 40888112 40888404 -212368179 - AluSx SINE Alu -19 293 1 281 305 54 36 chr2 40888805 40888972 -212367611 - MER5A DNA MER1_type -1 188 19 295 311 67 30 chr2 40888818 40888953 -212367630 + MER5B DNA MER1_type 15 154 -24 371 221 267 15 chr2 40888977 40889108 -212367475 + MER5A DNA MER1_type 7 170 -19 21 0 0 0 chr2 40889589 40889610 -212366973 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chr2 40889929 40889973 -212366610 + AT_rich Low_complexity Low_complexity 1 44 0 24 0 0 0 chr2 40890121 40890145 -212366438 + AT_rich Low_complexity Low_complexity 1 24 0 5336 110 46 16 chr2 40890974 40892484 -212364099 + L1PA15 LINE L1 4628 6165 0 1198 167 5 18 chr2 40892995 40893216 -212363367 + MER20 DNA MER1_type 1 218 -1 954 191 176 10 chr2 40893424 40893628 -212362955 - MER8 DNA MER2_type 0 239 2 190 286 0 0 chr2 40894106 40894155 -212362428 + L2 LINE L2 3024 3072 -241 844 56 112 0 chr2 40894418 40894543 -212362040 + MER85 DNA T2_type 1 139 0 292 290 131 9 chr2 40895167 40895232 -212361351 - MIR SINE MIR -50 212 156 8042 57 4 5 chr2 40895232 40896202 -212360381 + LTR5 LTR ERVK 1 969 0 292 290 131 9 chr2 40896202 40896293 -212360290 - MIR SINE MIR -106 156 40 237 132 0 0 chr2 40896662 40896700 -212359883 + (TG)n Simple_repeat Simple_repeat 2 39 0 222 128 0 0 chr2 40896691 40896730 -212359853 + (TA)n Simple_repeat Simple_repeat 1 39 0 * 2260 123 0 0 chr2 40896732 40897040 -212359543 - AluSx SINE Alu 0 312 5 1115 167 35 0 chr2 40897521 40897719 -212358864 + Tigger6 DNA MER2_type 2 206 -877 1565 137 72 75 chr2 40897730 40898117 -212358466 + Tigger6 DNA MER2_type 1212 1597 0 2227 114 7 0 chr2 40898202 40898509 -212358074 + AluSg SINE Alu 1 309 -1 779 142 0 39 chr2 40899059 40899186 -212357397 - FLAM_C SINE Alu -16 127 6 222 150 0 0 chr2 40899518 40899558 -212357025 + (CATA)n Simple_repeat Simple_repeat 4 43 0 1140 89 5 47 chr2 40900543 40900733 -212355850 + THE1C-int LTR MaLR 1399 1580 0 1502 148 81 32 chr2 40900733 40901043 -212355540 + THE1C LTR MaLR 1 325 -50 185 271 86 43 chr2 40901251 40901321 -212355262 + L2 LINE L2 1841 1913 -1401 2073 145 0 0 chr2 40902123 40902433 -212354150 + AluJb SINE Alu 1 310 -2 698 222 60 37 chr2 40902540 40902756 -212353827 + L1ME1 LINE L1 5893 6113 -53 225 321 166 41 chr2 40903618 40903908 -212352675 + HAL1 LINE L1 309 634 -1873 274 330 10 0 chr2 40903913 40904016 -212352567 + HAL1 LINE L1 780 883 -1624 1200 253 194 30 chr2 40904077 40904717 -212351866 + HAL1 LINE L1 1178 1922 -585 225 335 96 54 chr2 40905449 40905616 -212350967 - L2 LINE L2 -424 2890 2717 24 32 0 0 chr2 40907706 40907737 -212348846 + AT_rich Low_complexity Low_complexity 1 31 0 351 0 0 0 chr2 40908036 40908075 -212348508 + (TG)n Simple_repeat Simple_repeat 2 40 0 892 316 105 29 chr2 40908797 40909475 -212347108 - L2 LINE L2 -25 3288 2557 2295 103 3 3 chr2 40910264 40910576 -212346007 + AluSx SINE Alu 1 312 0 466 116 0 0 chr2 40910776 40910845 -212345738 + L1MB7 LINE L1 6108 6176 -8 1997 148 10 10 chr2 40911827 40912137 -212344446 - AluJo SINE Alu -2 310 1 469 225 0 0 chr2 40912157 40912246 -212344337 + L2 LINE L2 3225 3313 0 1456 182 70 52 chr2 40912733 40913063 -212343520 + MLT1A1 LTR MaLR 22 357 -8 606 315 97 17 chr2 40913388 40913737 -212342846 + L1MEd LINE L1 3 379 -5740 388 242 55 0 chr2 40913897 40914025 -212342558 + L1MEd LINE L1 602 736 -5383 500 274 135 17 chr2 40914803 40915165 -212341418 + L1MEd LINE L1 851 1255 -4864 451 276 29 38 chr2 40915191 40915401 -212341182 + HAL1 LINE L1 1417 1624 -883 2282 96 3 0 chr2 40915451 40915744 -212340839 + AluSg SINE Alu 1 294 -16 1929 131 33 0 chr2 40916183 40916504 -212340079 - AluSx SINE Alu 0 330 1 194 329 49 12 chr2 40917021 40917103 -212339480 + L2 LINE L2 3227 3311 -2 297 337 0 11 chr2 40918217 40918309 -212338274 + L2 LINE L2 3180 3270 -2 1385 186 14 101 chr2 40918338 40918704 -212337879 + MER58B DNA MER1_type 3 336 -5 199 375 142 21 chr2 40918751 40918991 -212337592 - L2 LINE L2 -173 3099 2831 243 329 47 0 chr2 40919021 40919106 -212337477 - L3 LINE CR1 -406 1171 1083 1213 173 6 138 chr2 40919166 40919507 -212337076 + AluJo SINE Alu 2 297 -5 2542 61 0 10 chr2 40919712 40920023 -212336560 + AluY SINE Alu 1 308 -3 248 153 68 0 chr2 40920113 40920172 -212336411 + Charlie1 DNA MER1_type 2625 2687 -74 544 323 57 30 chr2 40920231 40920494 -212336089 - L3 LINE CR1 -510 1067 798 1153 187 29 29 chr2 40921049 40921290 -212335293 + Charlie1 DNA MER1_type 2 242 -2519 736 118 0 56 chr2 40921273 40921417 -212335166 + Charlie1 DNA MER1_type 2622 2757 -4 * 206 225 127 0 chr2 40921556 40921627 -212334956 + MIR SINE MIR 180 259 -3 216 213 0 62 chr2 40921671 40921751 -212334832 + (CTTAA)n Simple_repeat Simple_repeat 1 75 0 27 29 0 0 chr2 40921795 40921829 -212334754 + AT_rich Low_complexity Low_complexity 1 34 0 326 346 90 48 chr2 40921832 40922020 -212334563 - L3 LINE CR1 -1197 380 185 21 0 0 0 chr2 40922998 40923019 -212333564 + AT_rich Low_complexity Low_complexity 1 21 0 311 263 74 11 chr2 40923587 40923682 -212332901 - MER103 DNA DNA -6 160 60 371 371 6 6 chr2 40923695 40923862 -212332721 + GA-rich Low_complexity Low_complexity 2 168 0 1058 201 23 27 chr2 40924039 40924258 -212332325 + MER20 DNA MER1_type 2 219 0 886 144 40 45 chr2 40924316 40924538 -212332045 + L1MD3 LINE L1 7765 7985 -10 228 276 31 87 chr2 40924715 40924842 -212331741 + L2 LINE L2 2586 2705 -609 917 158 120 5 chr2 40925068 40925252 -212331331 - MER2 DNA MER2_type -139 206 2 230 286 63 40 chr2 40925461 40925587 -212330996 + L2 LINE L2 3093 3221 -92 2106 122 0 7 chr2 40925757 40926045 -212330538 - AluSx SINE Alu -26 286 1 1720 119 4 4 chr2 40926129 40926381 -212330202 + AluSg SINE Alu 45 296 -14 305 311 72 44 chr2 40927152 40927332 -212329251 + MIR3 SINE MIR 18 202 -6 21 0 0 0 chr2 40927501 40927522 -212329061 + AT_rich Low_complexity Low_complexity 1 21 0 366 156 0 0 chr2 40927799 40927863 -212328720 + (CAG)n Simple_repeat Simple_repeat 2 65 0 788 291 81 0 chr2 40927863 40928086 -212328497 - MIR SINE MIR -10 252 12 1303 105 0 28 chr2 40928184 40928236 -212328347 + AluSc SINE Alu 82 134 -175 2266 74 3 3 chr2 40928236 40928542 -212328041 + AluY SINE Alu 1 306 0 1303 105 0 28 chr2 40928542 40928669 -212327914 + AluSc SINE Alu 134 257 -52 499 106 0 0 chr2 40928669 40928767 -212327816 + AluSg/x SINE Alu 213 310 0 1662 154 57 34 chr2 40929037 40929157 -212327426 + AluJb SINE Alu 1 117 -195 2033 116 10 3 chr2 40929157 40929458 -212327125 + AluSc SINE Alu 1 303 -6 1662 154 57 34 chr2 40929458 40929635 -212326948 + AluJb SINE Alu 117 305 -7 1108 203 48 12 chr2 40930600 40930851 -212325732 + MIR SINE MIR 3 262 0 301 249 11 34 chr2 40932158 40932282 -212324301 + MLT1L LTR MaLR 474 609 0 190 314 231 0 chr2 40932321 40932442 -212324141 + L2 LINE L2 3165 3313 0 883 101 14 22 chr2 40932871 40933009 -212323574 - THE1C LTR MaLR -238 137 1 10257 94 31 61 chr2 40933009 40934638 -212321945 - THE1C-int LTR MaLR 0 1580 1 2390 116 22 11 chr2 40934638 40935009 -212321574 - THE1C LTR MaLR 0 375 1 347 336 30 38 chr2 40935107 40935238 -212321345 + MIR SINE MIR 7 136 -126 56 61 0 0 chr2 40935730 40935828 -212320755 + AT_rich Low_complexity Low_complexity 1 98 0 4323 190 68 28 chr2 40936323 40937460 -212319123 + L1MB1 LINE L1 4150 5331 -815 2123 135 0 3 chr2 40937460 40937764 -212318819 + AluSx SINE Alu 1 303 -9 430 209 59 40 chr2 40937769 40937905 -212318678 + L1MA9 LINE L1 6178 6307 -5 1921 141 38 35 chr2 40937920 40938289 -212318294 + L1MB1 LINE L1 5324 5693 -475 839 226 20 0 chr2 40938289 40938487 -212318096 + L1MB1 LINE L1 5958 6160 -8 1059 123 82 6 chr2 40938489 40938660 -212317923 - MER4E LTR ERV1 -2 777 594 2134 124 7 0 chr2 40938660 40938959 -212317624 + AluSx SINE Alu 1 301 -11 3150 123 54 20 chr2 40938959 40939495 -212317088 - MER4D LTR ERV1 -348 555 2 2917 3 0 0 chr2 40939505 40939818 -212316765 - AluYb8 SINE Alu -5 313 1 2729 115 36 83 chr2 40940112 40940761 -212315822 - MER4B LTR ERV1 0 779 1 1679 203 7 0 chr2 40941334 40941644 -212314939 + AluJb SINE Alu 1 312 0 439 212 177 0 chr2 40941699 40941812 -212314771 + FLAM_A SINE Alu 1 133 0 423 105 76 114 chr2 40941844 40941949 -212314634 - MER106B DNA MER1_type -57 1002 902 1885 157 3 10 chr2 40942459 40942765 -212313818 + AluJo SINE Alu 1 304 -8 1229 123 0 0 chr2 40943268 40943438 -212313145 - AluSx SINE Alu -10 302 133 595 75 0 0 chr2 40943441 40943521 -212313062 - AluSx SINE Alu -233 80 1 259 351 80 21 chr2 40943573 40943761 -212312822 + L2 LINE L2 2837 3035 -237 1979 208 57 5 chr2 40945129 40945552 -212311031 - LTR65 LTR ERV1 0 669 225 429 222 30 20 chr2 40945552 40945651 -212310932 + Tigger4(Zombi) DNA MER2_type 1 100 -2631 869 198 46 5 chr2 40945654 40945871 -212310712 + L1MA3 LINE L1 2178 2403 -3743 238 245 0 61 chr2 40945887 40945985 -212310598 - L1MC4 LINE L1 -1339 6703 6612 23 0 0 0 chr2 40945986 40946009 -212310574 + AT_rich Low_complexity Low_complexity 1 23 0 6568 132 17 19 chr2 40946011 40948186 -212308397 + L1MA3 LINE L1 4138 6305 0 1722 134 82 0 chr2 40948186 40948454 -212308129 + AluSx SINE Alu 13 302 -10 37 18 0 18 chr2 40948454 40948474 -212308109 + AT_rich Low_complexity Low_complexity 1 20 -34 2185 101 0 7 chr2 40948474 40948770 -212307813 + AluSx SINE Alu 1 294 -18 37 18 0 18 chr2 40948770 40948804 -212307779 + AT_rich Low_complexity Low_complexity 20 54 0 1531 189 25 0 chr2 40949054 40949329 -212307254 + AluJo SINE Alu 1 282 -30 413 232 93 57 chr2 40949409 40949603 -212306980 + L1MC5 LINE L1 7305 7505 -456 2003 197 150 21 chr2 40949682 40950262 -212306321 - L1MB8 LINE L1 -3 6175 5521 321 278 68 21 chr2 40950283 40950500 -212306083 + L1ME4a LINE L1 5979 6093 -28 221 304 0 25 chr2 40950617 40950696 -212305887 - L2 LINE L2 -16 3256 3180 186 250 50 0 chr2 40950768 40950808 -212305775 - L2 LINE L2 -200 3072 3031 319 224 9 122 chr2 40951209 40951316 -212305267 + MER58C DNA MER1_type 121 215 0 372 276 63 31 chr2 40951699 40951826 -212304757 - MIR3 SINE MIR -76 132 2 21 0 0 0 chr2 40952283 40952304 -212304279 + AT_rich Low_complexity Low_complexity 1 21 0 1180 230 15 23 chr2 40952396 40952657 -212303926 - MIR SINE MIR -2 260 2 290 237 32 0 chr2 40952899 40952992 -212303591 + (TA)n Simple_repeat Simple_repeat 1 96 0 1907 176 52 8 chr2 40954880 40954992 -212301591 - L1MB7 LINE L1 -8 6176 6065 960 221 138 32 chr2 40954992 40955363 -212301220 - L1MC4 LINE L1 -1986 6056 5647 * 1522 165 77 32 chr2 40955352 40955783 -212300800 - L1MB8 LINE L1 -775 5371 4922 347 290 55 52 chr2 40956458 40956653 -212299930 + MIR3 SINE MIR 14 203 -5 185 324 69 39 chr2 40956777 40956879 -212299704 - MER5A DNA MER1_type -83 106 2 220 333 42 0 chr2 40956793 40956865 -212299718 + MER5B DNA MER1_type 100 174 -4 2235 147 22 0 chr2 40957215 40957582 -212299001 - THE1C LTR MaLR 0 375 1 242 122 0 24 chr2 40957861 40957902 -212298681 + MER58A DNA MER1_type 45 84 -23 1765 153 3 31 chr2 40957909 40958203 -212298380 + AluJo SINE Alu 13 298 -14 535 188 31 0 chr2 40958205 40958301 -212298282 + MER58A DNA MER1_type 126 224 0 2265 118 0 0 chr2 40958338 40958651 -212297932 + AluSq SINE Alu 1 313 0 774 181 0 0 chr2 40958653 40958786 -212297797 + MER3 DNA MER1_type 1 133 -76 3081 200 96 43 chr2 40958851 40959626 -212296957 - L1ME1 LINE L1 -24 6142 5409 386 20 20 0 chr2 40959626 40959677 -212296906 + (TA)n Simple_repeat Simple_repeat 2 53 0 3081 200 96 43 chr2 40959677 40959706 -212296877 - L1ME1 LINE L1 -757 5409 5383 2310 103 0 7 chr2 40959706 40960006 -212296577 - AluSq SINE Alu -15 298 1 3081 200 96 43 chr2 40960006 40960068 -212296515 - L1ME1 LINE L1 -783 5383 5326 2081 186 3 13 chr2 40960068 40960460 -212296123 + MLT1B LTR MaLR 3 390 0 3081 200 96 43 chr2 40960460 40960880 -212295703 - L1ME1 LINE L1 -840 5326 4930 2037 142 6 10 chr2 40960880 40961191 -212295392 - AluSx SINE Alu -2 310 1 3081 200 96 43 chr2 40961191 40961521 -212295062 - L1ME1 LINE L1 -1236 4930 4439 282 197 66 0 chr2 40961523 40961584 -212294999 + MER3 DNA MER1_type 144 208 -1 247 293 0 0 chr2 40961540 40961598 -212294985 - MER3 DNA MER1_type -117 92 35 * 22 0 0 0 chr2 40961957 40961979 -212294604 + AT_rich Low_complexity Low_complexity 1 22 0 1155 263 120 63 chr2 40962344 40963952 -212292631 + L1MEd LINE L1 6 1580 -4551 291 252 111 83 chr2 40964166 40964379 -212292204 + MER20B DNA MER1_type 1 214 -5 328 316 25 32 chr2 40964446 40964604 -212291979 - MER5A DNA MER1_type -30 159 3 24 0 0 0 chr2 40964838 40964862 -212291721 + AT_rich Low_complexity Low_complexity 1 24 0 2494 63 0 13 chr2 40965148 40965463 -212291120 + AluY SINE Alu 1 311 0 474 268 14 7 chr2 40965464 40965602 -212290981 - MER103 DNA DNA -24 142 4 426 235 12 0 chr2 40965669 40965754 -212290829 + L2 LINE L2 3185 3270 -2 596 213 102 35 chr2 40965761 40965958 -212290625 + MER63A DNA MER1_type 1 210 0 2355 82 0 13 chr2 40965975 40966280 -212290303 + AluSc SINE Alu 1 301 -8 1924 203 53 0 chr2 40966687 40967061 -212289522 + MSTD LTR MaLR 3 396 0 33 0 0 0 chr2 40967590 40967623 -212288960 + AT_rich Low_complexity Low_complexity 1 33 0 557 58 0 0 chr2 40967623 40967692 -212288891 - U6 snRNA snRNA -37 70 2 1045 215 75 26 chr2 40967785 40968013 -212288570 + MER8 DNA MER2_type 1 239 0 210 375 25 17 chr2 40968366 40968486 -212288097 - L2 LINE L2 -653 2661 2541 318 106 0 0 chr2 40969387 40969434 -212287149 + (CA)n Simple_repeat Simple_repeat 2 48 0 1806 169 7 13 chr2 40970106 40970413 -212286170 - AluJo SINE Alu -7 305 1 2386 61 24 0 chr2 40970553 40970847 -212285736 - AluY SINE Alu -10 301 1 323 321 90 17 chr2 40971353 40971876 -212284707 + L1MC4a LINE L1 4280 4840 -1306 * 1056 221 122 61 chr2 40971871 40972492 -212284091 + L1MC4a LINE L1 5268 5926 -1882 28 29 0 0 chr2 40972660 40972695 -212283888 + AT_rich Low_complexity Low_complexity 1 35 0 384 88 0 0 chr2 40972779 40972836 -212283747 + (TAA)n Simple_repeat Simple_repeat 2 58 0 2062 128 13 13 chr2 40972837 40973142 -212283441 + AluSx SINE Alu 1 305 -7 230 299 103 21 chr2 40974295 40974392 -212282191 + L2 LINE L2 2552 2656 -658 375 320 133 22 chr2 40974496 40974858 -212281725 - L1 LINE L1 -2867 3279 2878 2512 277 97 20 chr2 40975064 40975592 -212280991 + L1MEc LINE L1 162 648 -5748 1548 187 3 10 chr2 40975592 40975892 -212280691 + AluJb SINE Alu 1 298 -14 2512 277 97 20 chr2 40975892 40976538 -212280045 + L1MEc LINE L1 648 1426 -4970 1251 211 70 103 chr2 40976549 40977247 -212279336 + L1MEc LINE L1 3024 3698 -2517 * 18220 136 43 27 chr2 40977246 40978684 -212277899 + L1M1 LINE L1 12 1426 -6139 2339 103 3 0 chr2 40978684 40978995 -212277588 - AluSp SINE Alu -1 312 1 18220 136 43 27 chr2 40978995 40979661 -212276922 + L1M1 LINE L1 1426 2080 -5485 1811 172 3 13 chr2 40979661 40979969 -212276614 + AluJb SINE Alu 1 305 -7 18220 136 43 27 chr2 40979969 40980957 -212275626 + L1M1 LINE L1 2080 3154 -4411 1266 241 104 11 chr2 40980944 40981413 -212275170 + L1MEc LINE L1 3668 4180 -2035 * 10315 118 44 41 chr2 40981413 40981625 -212274958 + Tigger2 DNA MER2_type 965 1175 -1543 1634 188 0 40 chr2 40981625 40981949 -212274634 - AluJb SINE Alu 0 312 2 10315 118 44 41 chr2 40981949 40983484 -212273099 + Tigger2 DNA MER2_type 1175 2717 -1 602 192 0 0 chr2 40983522 40983621 -212272962 + FLAM_A SINE Alu 1 99 -43 213 364 15 0 chr2 40985519 40985585 -212270998 - L2 LINE L2 -5 3267 3201 455 303 8 8 chr2 40986414 40986546 -212270037 - L2 LINE L2 -15 3298 3167 521 312 98 30 chr2 40986751 40986985 -212269598 - MIR SINE MIR 0 262 13 186 309 48 48 chr2 40987342 40987426 -212269157 - MIR SINE MIR -73 135 52 2132 102 0 7 chr2 40988668 40988963 -212267620 + AluY SINE Alu 1 293 -18 2407 97 0 3 chr2 40989744 40990055 -212266528 + AluSx SINE Alu 1 310 -2 225 0 0 0 chr2 40990055 40990080 -212266503 + (TA)n Simple_repeat Simple_repeat 2 26 0 284 125 0 0 chr2 40990182 40990230 -212266353 + L1MB8 LINE L1 6130 6177 -1 815 258 57 16 chr2 40990889 40991137 -212265446 + MIR SINE MIR 2 259 -3 3015 205 127 92 chr2 40991219 40991282 -212265301 + L1MC3 LINE L1 6397 6456 -1329 2377 84 3 0 chr2 40991282 40991592 -212264991 - AluY SINE Alu 0 311 1 3015 205 127 92 chr2 40991592 40991995 -212264588 + L1MC3 LINE L1 6456 6843 -942 2150 119 0 10 chr2 40991995 40992297 -212264286 + AluSc SINE Alu 1 299 -10 3015 205 127 92 chr2 40992297 40992521 -212264062 + L1MC3 LINE L1 6843 7058 -727 355 237 32 21 chr2 40992521 40992614 -212263969 + MLT1B LTR MaLR 37 130 -437 3015 205 127 92 chr2 40992614 40993171 -212263412 + L1MC3 LINE L1 7058 7785 0 22 35 0 0 chr2 40993390 40993419 -212263164 + AT_rich Low_complexity Low_complexity 1 29 0 1873 156 20 7 chr2 40994485 40994787 -212261796 - AluJo SINE Alu -6 306 1 851 206 22 119 chr2 40995338 40995452 -212261131 + MIR SINE MIR 1 125 -137 786 173 0 0 chr2 40995452 40995585 -212260998 - FLAM_C SINE Alu 0 133 1 851 206 22 119 chr2 40995585 40995747 -212260836 + MIR SINE MIR 125 250 -12 1074 164 15 0 chr2 40996468 40996663 -212259920 + MLT1B LTR MaLR 193 390 0 5352 200 84 73 chr2 40996663 40998025 -212258558 + L1MC4 LINE L1 4817 6162 -1880 2520 58 0 0 chr2 40998025 40998318 -212258265 - AluSx SINE Alu -19 293 1 5352 200 84 73 chr2 40998318 40998622 -212257961 + L1MC4 LINE L1 6162 6461 -1581 1982 153 0 3 chr2 40998622 40998929 -212257654 + AluJo SINE Alu 1 306 -6 5352 200 84 73 chr2 40998929 40999462 -212257121 + L1MC4 LINE L1 6461 6987 -1055 1324 207 102 12 chr2 40999462 40999805 -212256778 + MLT1A2 LTR MaLR 1 374 0 5352 200 84 73 chr2 40999805 41000786 -212255797 + L1MC4 LINE L1 6987 8031 -11 288 259 103 62 chr2 41000943 41001333 -212255250 + L1MCa LINE L1 1454 1916 -871 2183 80 7 30 chr2 41002467 41002767 -212253816 + AluSq SINE Alu 1 293 -20 2442 73 10 0 chr2 41002862 41003164 -212253419 + AluSg SINE Alu 1 305 -5 478 234 39 0 chr2 41003369 41003497 -212253086 + L1ME2 LINE L1 4464 4596 -1550 590 199 90 32 chr2 41003510 41003744 -212252839 + L1MD3 LINE L1 6115 7985 -10 1144 217 29 0 chr2 41003748 41004025 -212252558 + L1ME2 LINE L1 4599 4883 -1263 310 240 90 40 chr2 41004028 41004128 -212252455 + L1ME2 LINE L1 5911 6015 -149 921 67 0 0 chr2 41004128 41004248 -212252335 - THE1B LTR MaLR 0 364 245 24 0 0 0 chr2 41004592 41004616 -212251967 + AT_rich Low_complexity Low_complexity 1 24 0 660 215 140 27 chr2 41005044 41005230 -212251353 - L2 LINE L2 0 3313 3107 303 233 0 0 chr2 41005239 41005299 -212251284 + MER69 DNA AcHobo 8 67 -1159 568 172 97 0 chr2 41005440 41005574 -212251009 + MER69 DNA AcHobo 2380 2526 0 434 254 71 46 chr2 41005591 41005788 -212250795 - L2 LINE L2 -225 3088 2887 609 149 119 37 chr2 41005884 41006018 -212250565 - MIR SINE MIR -115 147 3 193 242 32 0 chr2 41006489 41006551 -212250032 - L3b LINE CR1 -200 1383 1320 415 202 22 0 chr2 41007081 41007170 -212249413 + MER103 DNA DNA 7 97 -69 195 191 115 0 chr2 41008025 41008073 -212248510 - MIR SINE MIR -89 119 66 762 236 192 0 chr2 41008735 41008943 -212247640 + MIR SINE MIR 15 262 0 425 313 215 24 chr2 41009211 41009860 -212246723 + L2 LINE L2 2544 3305 -8 189 74 0 0 chr2 41011188 41011215 -212245368 + (CCG)n Simple_repeat Simple_repeat 3 29 0 30 0 0 0 chr2 41011256 41011286 -212245297 + GC_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr2 41012764 41012789 -212243794 + AT_rich Low_complexity Low_complexity 1 25 0 2252 109 0 3 chr2 41013112 41013416 -212243167 - AluSp SINE Alu -10 303 1 457 311 101 0 chr2 41013860 41014008 -212242575 - L3 LINE CR1 -23 1554 1392 740 243 150 0 chr2 41014039 41014265 -212242318 - MIR SINE MIR 0 262 3 217 313 0 73 chr2 41014323 41014419 -212242164 - L2 LINE L2 -31 3241 3153 2391 81 3 3 chr2 41014491 41014798 -212241785 + AluSx SINE Alu 1 307 -5 28 0 0 0 chr2 41015340 41015368 -212241215 + AT_rich Low_complexity Low_complexity 1 28 0 2133 112 0 14 chr2 41015368 41015663 -212240920 + AluSx SINE Alu 1 291 -21 579 152 0 18 chr2 41015686 41015798 -212240785 - L1MA9 LINE L1 -5 6307 6198 294 279 76 0 chr2 41015948 41016027 -212240556 + MIR SINE MIR 23 107 -155 207 136 45 23 chr2 41016072 41016116 -212240467 + MIR SINE MIR 218 262 0 2390 90 10 0 chr2 41016136 41016446 -212240137 - AluSp SINE Alu 0 313 1 214 395 120 8 chr2 41016519 41016901 -212239682 - L2 LINE L2 -663 2651 2227 2390 124 22 8 chr2 41016925 41017295 -212239288 + THE1C LTR MaLR 1 375 0 1765 191 3 7 chr2 41017507 41017800 -212238783 - AluJb SINE Alu -20 292 1 229 238 159 24 chr2 41017993 41018119 -212238464 - MER20B DNA MER1_type -604 179 37 284 324 9 19 chr2 41018396 41018501 -212238082 - L2 LINE L2 -191 3081 2978 530 334 0 76 chr2 41018541 41018843 -212237740 - L2 LINE L2 -455 2859 2581 496 290 99 36 chr2 41019111 41019476 -212237107 + LTR16B LTR ERVL 53 440 -24 232 308 92 8 chr2 41019503 41019623 -212236960 - L2 LINE L2 -1298 2016 1887 449 297 126 19 chr2 41019648 41019917 -212236666 - L3 LINE CR1 -331 1246 949 4142 112 28 121 chr2 41020391 41020838 -212235745 + Tigger3(Golem) DNA MER2_type 3 490 -2539 755 167 0 0 chr2 41020838 41020958 -212235625 + FLAM_C SINE Alu 3 122 -11 4142 112 28 121 chr2 41020958 41021162 -212235421 + Tigger3(Golem) DNA MER2_type 490 712 -2317 470 250 0 0 chr2 41021162 41021250 -212235333 + FLAM_A SINE Alu 2 89 -53 4142 112 28 121 chr2 41021250 41021355 -212235228 + Tigger3(Golem) DNA MER2_type 712 825 -2204 1842 171 0 10 chr2 41021355 41021648 -212234935 + AluJo SINE Alu 12 301 -11 4142 112 28 121 chr2 41021648 41022134 -212234449 + Tigger3(Golem) DNA MER2_type 825 3029 0 2379 89 3 0 chr2 41022665 41022968 -212233615 + AluSg SINE Alu 1 304 -6 2302 82 0 3 chr2 41022975 41023281 -212233302 + AluY SINE Alu 1 305 -6 2094 48 45 4 chr2 41023290 41023589 -212232994 + AluY SINE Alu 1 310 0 2039 103 45 3 chr2 41023765 41024057 -212232526 - AluSc SINE Alu -5 304 1 2205 115 0 3 chr2 41024149 41024444 -212232139 - AluSq SINE Alu -19 294 1 2327 97 3 0 chr2 41025739 41026023 -212230560 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr2 41026023 41026046 -212230537 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 2327 97 3 0 chr2 41026046 41026061 -212230522 + AluSx SINE Alu 288 301 -11 252 312 73 9 chr2 41026268 41026377 -212230206 - MIR SINE MIR -46 216 101 255 268 37 49 chr2 41026415 41026497 -212230086 - L2 LINE L2 -16 3256 3176 609 174 97 21 chr2 41026699 41026843 -212229740 + FRAM SINE Alu 11 165 -11 535 327 50 13 chr2 41026878 41027257 -212229326 + L1ME3A LINE L1 5558 5950 -220 1849 150 3 55 chr2 41027701 41028028 -212228555 - AluJo SINE Alu 0 312 1 226 217 98 76 chr2 41028162 41028254 -212228329 + L2 LINE L2 3179 3272 -41 2285 71 0 10 chr2 41028535 41028830 -212227753 + AluY SINE Alu 3 294 -17 561 250 8 92 chr2 41030331 41030477 -212226106 + L1ME1 LINE L1 2028 2144 -4252 2337 82 3 10 chr2 41030477 41030780 -212225803 + AluSp SINE Alu 1 301 -12 561 250 8 92 chr2 41030780 41030893 -212225690 + L1ME1 LINE L1 2144 2265 -4131 30 0 0 0 chr2 41030893 41030923 -212225660 + AT_rich Low_complexity Low_complexity 1 30 0 1937 270 94 20 chr2 41030923 41031863 -212224720 + L1ME1 LINE L1 2212 3266 -2949 1513 203 17 7 chr2 41031863 41032153 -212224430 + AluJb SINE Alu 1 293 -19 1937 270 94 20 chr2 41032153 41032444 -212224139 + L1ME1 LINE L1 3266 3534 -2681 3393 206 51 27 chr2 41032476 41032543 -212224040 + L1ME1 LINE L1 5101 5165 -1070 333 0 0 0 chr2 41032543 41032580 -212224003 + (CA)n Simple_repeat Simple_repeat 2 38 0 3393 206 51 27 chr2 41032580 41032614 -212223969 + L1ME1 LINE L1 5165 5197 -1038 649 212 8 0 chr2 41032614 41032746 -212223837 + FLAM_C SINE Alu 1 133 0 3393 206 51 27 chr2 41032746 41033420 -212223163 + L1ME1 LINE L1 5197 5899 -336 2024 126 17 0 chr2 41033420 41033713 -212222870 + AluSq SINE Alu 1 298 -15 3393 206 51 27 chr2 41033713 41034053 -212222530 + L1ME1 LINE L1 5899 6230 -5 969 257 95 3 chr2 41034063 41034359 -212222224 + L1ME3A LINE L1 5317 5639 -531 1293 223 78 21 chr2 41034382 41034550 -212222033 + L1ME3A LINE L1 5756 5913 -257 2300 82 0 0 chr2 41034550 41034864 -212221719 + AluSc SINE Alu 1 314 0 1293 223 78 21 chr2 41034864 41035076 -212221507 + L1ME3A LINE L1 5913 6159 -11 307 352 50 32 chr2 41035360 41035579 -212221004 + L1ME4a LINE L1 5692 5914 -207 2063 124 44 0 chr2 41035930 41036228 -212220355 + AluSx SINE Alu 1 311 -1 335 236 112 75 chr2 41036282 41036443 -212220140 - MLT1K LTR MaLR -411 177 11 503 191 180 10 chr2 41036655 41036849 -212219734 + L1MB7 LINE L1 5953 6179 -5 456 224 8 96 chr2 41036858 41036961 -212219622 - MER81 DNA DNA 0 114 22 2434 92 7 0 chr2 41036961 41037267 -212219316 + AluSq SINE Alu 1 308 -5 456 224 8 96 chr2 41037267 41037288 -212219295 - MER81 DNA DNA -92 22 1 1215 221 121 7 chr2 41037288 41037587 -212218996 - MLT1F LTR MaLR -32 510 174 1121 184 61 54 chr2 41037686 41037980 -212218603 - AluJo SINE Alu -6 306 11 338 233 92 98 chr2 41037998 41038161 -212218422 - MLT1F LTR MaLR -380 162 1 2346 102 0 3 chr2 41038176 41038479 -212218104 - AluSx SINE Alu -10 302 1 494 284 204 4 chr2 41038555 41038830 -212217753 - L1ME LINE L1 -411 5710 5381 192 125 0 0 chr2 41038885 41038917 -212217666 + (TA)n Simple_repeat Simple_repeat 2 33 0 479 332 33 51 chr2 41039107 41039441 -212217142 - L2 LINE L2 -436 2878 2551 1223 270 42 15 chr2 41039642 41039975 -212216608 + LTR16A LTR ERVL 16 357 -93 263 212 15 15 chr2 41039977 41040043 -212216540 + CT-rich Low_complexity Low_complexity 4 69 0 532 172 0 11 chr2 41040077 41040164 -212216419 + LTR16A LTR ERVL 360 445 -5 232 327 187 23 chr2 41040403 41040660 -212215923 - L2 LINE L2 -778 2536 2238 258 256 79 67 chr2 41040723 41040929 -212215654 + HAL1 LINE L1 916 1129 -1378 2489 90 0 0 chr2 41040929 41041239 -212215344 + AluSx SINE Alu 1 310 -2 258 256 79 67 chr2 41041239 41041348 -212215235 + HAL1 LINE L1 1129 1235 -1272 436 328 57 57 chr2 41041454 41041908 -212214675 - L2 LINE L2 -1641 1673 1220 4373 89 5 16 chr2 41042254 41042814 -212213769 + MER41A LTR ERV1 1 554 0 339 239 64 28 chr2 41042828 41042937 -212213646 + L2 LINE L2 3200 3312 -1 537 30 0 0 chr2 41044518 41044585 -212211998 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 1021 288 119 23 chr2 41044691 41045450 -212211133 - L1MC4a LINE L1 -749 5397 5054 1072 237 60 8 chr2 41045498 41045764 -212210819 + L2 LINE L2 2581 2860 -454 223 179 0 0 chr2 41045763 41045802 -212210781 + MIR SINE MIR 217 255 -7 * 317 258 138 12 chr2 41045840 41046060 -212210523 + L1ME LINE L1 5475 5719 -447 500 290 30 84 chr2 41046150 41046447 -212210136 - L1MC4a LINE L1 -2197 3949 3669 334 48 26 12 chr2 41046459 41046509 -212210074 - MER41B LTR ERV1 -88 547 515 2287 97 0 31 chr2 41046509 41046828 -212209755 + AluSc SINE Alu 1 309 0 334 48 26 12 chr2 41046828 41046864 -212209719 - MER41B LTR ERV1 -120 515 481 308 280 79 90 chr2 41046867 41047072 -212209511 - L1MC4a LINE L1 -2409 3737 3531 2323 87 3 0 chr2 41047072 41047370 -212209213 + AluSp SINE Alu 1 299 -14 308 280 79 90 chr2 41047370 41047561 -212209022 - L1MC4a LINE L1 -2615 3531 3339 1978 116 0 51 chr2 41047561 41047884 -212208699 - AluSg SINE Alu 0 309 2 308 280 79 90 chr2 41047884 41047919 -212208664 - L1MC4a LINE L1 -2807 3339 3305 1996 145 0 7 chr2 41047919 41048222 -212208361 + AluJb SINE Alu 1 301 -11 308 280 79 90 chr2 41048222 41048349 -212208234 - L1MC4a LINE L1 -2841 3305 3178 1471 190 84 16 chr2 41048349 41048670 -212207913 + MER2 DNA MER2_type 1 343 -1 308 280 79 90 chr2 41048670 41048702 -212207881 - L1MC4a LINE L1 -2968 3178 3147 432 37 0 0 chr2 41048702 41048756 -212207827 + (TG)n Simple_repeat Simple_repeat 2 55 0 308 280 79 90 chr2 41048756 41048845 -212207738 - L1MC4a LINE L1 -2999 3147 3060 2194 126 0 3 chr2 41048887 41049189 -212207394 + AluSg SINE Alu 1 301 -9 2182 117 0 3 chr2 41049409 41049707 -212206876 + AluSq SINE Alu 1 297 -16 201 121 0 0 chr2 41049978 41050011 -212206572 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 182 337 120 23 chr2 41050545 41050978 -212205605 + L2 LINE L2 1846 2320 -994 2080 128 0 0 chr2 41051044 41051325 -212205258 - AluSx SINE Alu -31 281 1 2797 147 21 7 chr2 41051869 41052291 -212204292 + MSTA LTR MaLR 1 428 0 194 317 0 0 chr2 41052897 41052957 -212203626 + L2 LINE L2 2992 3051 -221 267 190 122 21 chr2 41053926 41054022 -212202561 + MIR SINE MIR 32 148 -60 2319 87 10 3 chr2 41054326 41054637 -212201946 + AluSq SINE Alu 1 313 0 288 0 0 0 chr2 41054826 41054858 -212201725 + (TA)n Simple_repeat Simple_repeat 2 33 0 2122 102 10 3 chr2 41054858 41055152 -212201431 - AluSp SINE Alu -17 296 1 22 88 0 0 chr2 41055373 41055430 -212201153 + AT_rich Low_complexity Low_complexity 1 57 0 833 166 40 0 chr2 41055430 41055581 -212201002 - L1MA7 LINE L1 0 6291 6135 260 284 20 10 chr2 41055652 41055754 -212200829 + (TATATG)n Simple_repeat Simple_repeat 6 108 0 2038 91 33 4 chr2 41056243 41056549 -212200034 - AluSq SINE Alu 0 314 1 259 240 19 0 chr2 41056636 41056740 -212199843 + (TA)n Simple_repeat Simple_repeat 2 107 0 1762 175 10 13 chr2 41056756 41057059 -212199524 - AluJo SINE Alu -10 302 1 2161 161 17 61 chr2 41058186 41058596 -212197987 + MSTD LTR MaLR 3 394 -2 1996 103 78 7 chr2 41059691 41059973 -212196610 - AluSx SINE Alu -10 302 1 237 290 0 16 chr2 41060709 41060771 -212195812 + GA-rich Low_complexity Low_complexity 2 62 0 948 126 0 0 chr2 41060893 41061044 -212195539 + (TC)n Simple_repeat Simple_repeat 2 152 0 2267 93 0 0 chr2 41061046 41061326 -212195257 - AluSx SINE Alu -32 280 1 279 306 14 0 chr2 41062001 41062073 -212194510 + polypyrimidine Low_complexity Low_complexity 1 73 0 1298 165 169 8 chr2 41062252 41062518 -212194065 - 7SLRNA srpRNA srpRNA -11 309 1 1786 174 10 0 chr2 41062645 41062939 -212193644 - AluJb SINE Alu -15 297 1 2257 102 7 0 chr2 41062952 41063257 -212193326 - AluSx SINE Alu -5 307 1 427 262 153 16 chr2 41063284 41063467 -212193116 - L1M4 LINE L1 -351 5811 5604 2187 99 3 0 chr2 41063620 41063914 -212192669 - AluY SINE Alu -15 296 2 2200 128 0 0 chr2 41063953 41064251 -212192332 + AluSx SINE Alu 1 298 -14 2291 120 3 0 chr2 41064352 41064660 -212191923 + AluSx SINE Alu 1 309 -3 2254 115 0 0 chr2 41064944 41065239 -212191344 - AluSx SINE Alu -13 299 5 2224 78 24 7 chr2 41065301 41065594 -212190989 - AluY SINE Alu -11 300 3 278 253 0 24 chr2 41065899 41065982 -212190601 + MIR SINE MIR 182 262 0 490 131 48 0 chr2 41067336 41067420 -212189163 - L1MA9 LINE L1 0 6312 6225 204 250 0 0 chr2 41067422 41067470 -212189113 + (TA)n Simple_repeat Simple_repeat 2 49 0 260 136 169 0 chr2 41067472 41067531 -212189052 + L1MA9 LINE L1 6225 6293 -19 225 121 17 52 chr2 41067531 41067589 -212188994 + (TA)n Simple_repeat Simple_repeat 2 57 0 285 51 0 0 chr2 41067589 41067628 -212188955 - L1MA9 LINE L1 -119 6193 6155 194 146 0 24 chr2 41067628 41067669 -212188914 + (TTTC)n Simple_repeat Simple_repeat 3 42 0 2883 166 14 4 chr2 41067670 41068165 -212188418 - L1MA9 LINE L1 -148 6164 5665 2121 113 24 0 chr2 41068165 41068456 -212188127 - AluSx SINE Alu -14 298 1 2206 135 0 0 chr2 41068561 41068872 -212187711 + AluSx SINE Alu 2 312 0 338 273 35 43 chr2 41069393 41069553 -212187030 - MIR SINE MIR -46 162 13 1212 153 157 32 chr2 41069957 41070357 -212186226 - AluJo SINE Alu 0 433 3 715 140 9 9 chr2 41070650 41070764 -212185819 - FLAM_A SINE Alu -17 125 12 231 188 0 0 chr2 41070994 41071042 -212185541 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 646 183 58 0 chr2 41071306 41071410 -212185173 - FLAM_A SINE Alu -32 110 1 7740 38 5 0 chr2 41071904 41072778 -212183805 + L1PA5 LINE L1 5271 6148 -6 368 227 0 0 chr2 41073190 41073265 -212183318 - MER63 DNA MER1_type -9 1051 977 329 279 47 0 chr2 41073267 41073353 -212183230 - MER63 DNA MER1_type -320 742 27 1105 206 52 28 chr2 41073486 41073734 -212182849 - MLT1D LTR MaLR 0 505 252 192 179 0 0 chr2 41073785 41073824 -212182759 + (TG)n Simple_repeat Simple_repeat 1 39 0 644 209 25 70 chr2 41073833 41074034 -212182549 - MLT1D LTR MaLR -313 192 1 1998 100 75 0 chr2 41074105 41074385 -212182198 - AluY SINE Alu -10 301 1 249 33 0 0 chr2 41075529 41075559 -212181024 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 203 61 30 0 chr2 41075560 41075593 -212180990 + (TC)n Simple_repeat Simple_repeat 1 34 0 1193 172 0 0 chr2 41075603 41075772 -212180811 - FAM SINE Alu -5 170 2 261 75 0 0 chr2 41075775 41075815 -212180768 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 2302 123 0 0 chr2 41075815 41076125 -212180458 - AluSq SINE Alu -2 311 2 398 242 117 16 chr2 41076129 41076257 -212180326 + MIR SINE MIR 122 262 0 1953 179 28 11 chr2 41076274 41076632 -212179951 + MLT1A1 LTR MaLR 1 364 -1 478 288 107 19 chr2 41077286 41077491 -212179092 - MIR SINE MIR -39 223 1 1849 150 0 35 chr2 41077499 41077812 -212178771 - AluJb SINE Alu -10 302 1 273 57 0 0 chr2 41077939 41077974 -212178609 + (A)n Simple_repeat Simple_repeat 1 35 0 2190 128 3 3 chr2 41077976 41078281 -212178302 + AluSq SINE Alu 1 305 -8 479 220 193 27 chr2 41078289 41078439 -212178144 - MER96 DNA MER1_type 0 175 1 321 157 12 72 chr2 41078477 41078560 -212178023 - LTR41 LTR ERVL 0 773 696 282 210 48 0 chr2 41079651 41079713 -212176870 + MER5B DNA MER1_type 1 65 -113 681 165 15 38 chr2 41079738 41079871 -212176712 + FLAM_C SINE Alu 11 140 -3 2107 130 0 13 chr2 41079995 41080310 -212176273 + AluSx SINE Alu 1 311 -1 1097 196 126 0 chr2 41081026 41081225 -212175358 - MER58A DNA MER1_type 0 224 1 790 276 71 4 chr2 41081392 41081617 -212174966 - MIR SINE MIR -3 259 20 1889 209 139 20 chr2 41081796 41082256 -212174327 + LTR40a LTR ERVL 5 519 0 417 317 55 24 chr2 41082551 41082715 -212173868 + MER5A DNA MER1_type 2 170 -19 1104 206 25 0 chr2 41082820 41083024 -212173559 - MER3 DNA MER1_type 0 209 1 959 149 25 113 chr2 41083026 41083308 -212173275 + L1MC5 LINE L1 6796 7052 -909 377 312 32 38 chr2 41083425 41083582 -212173001 + LTR16C LTR ERVL 336 491 0 180 0 0 0 chr2 41084221 41084241 -212172342 + (CTGGGG)n Simple_repeat Simple_repeat 1 20 0 657 248 108 6 chr2 41084397 41084554 -212172029 + MER63A DNA MER1_type 5 177 -33 2447 85 3 3 chr2 41084855 41085162 -212171421 - AluSp SINE Alu -6 307 1 275 179 15 0 chr2 41088042 41088109 -212168474 + (TG)n Simple_repeat Simple_repeat 1 68 0 352 307 69 53 chr2 41088525 41088714 -212167869 + MIR SINE MIR 20 211 -51 197 260 82 55 chr2 41089009 41089082 -212167501 - MIR SINE MIR -87 121 47 266 268 24 12 chr2 41089149 41089231 -212167352 + MER5A DNA MER1_type 1 83 -106 2260 201 84 33 chr2 41092909 41093239 -212163344 + MER119 DNA MER1_type 8 379 -204 1844 87 4 0 chr2 41093239 41093468 -212163115 - AluSc SINE Alu -16 293 64 2260 201 84 33 chr2 41093468 41093685 -212162898 + MER119 DNA MER1_type 379 583 0 533 178 309 58 chr2 41093884 41093958 -212162625 - MER5C DNA MER1_type 0 324 270 2155 164 41 50 chr2 41093958 41094374 -212162209 + MLT2D LTR ERVL 3 414 0 533 178 309 58 chr2 41094374 41094558 -212162025 - MER5C DNA MER1_type -54 270 1 213 235 0 0 chr2 41094575 41094626 -212161957 + (TA)n Simple_repeat Simple_repeat 2 52 0 755 162 18 24 chr2 41094627 41094794 -212161789 - L1MD3 LINE L1 -14 7981 7816 2337 135 127 16 chr2 41094800 41095185 -212161398 - MSTA LTR MaLR 0 428 1 8133 151 89 30 chr2 41095185 41096661 -212159922 - MSTA-int LTR MaLR 0 1580 17 2186 144 152 8 chr2 41096666 41097040 -212159543 - MSTA LTR MaLR 0 428 1 297 300 83 25 chr2 41097569 41097689 -212158894 + L2 LINE L2 3146 3272 0 269 238 25 25 chr2 41099233 41099313 -212157270 + MIR SINE MIR 165 244 -18 1159 300 176 40 chr2 41100060 41100451 -212156132 + L2 LINE L2 1708 2045 -1227 2127 107 45 0 chr2 41100451 41100740 -212155843 - AluSx SINE Alu -10 302 1 1159 300 176 40 chr2 41100740 41101347 -212155236 + L2 LINE L2 2045 2568 -704 2506 70 0 0 chr2 41101347 41101647 -212154936 - AluY SINE Alu -11 300 1 1159 300 176 40 chr2 41101647 41102011 -212154572 + L2 LINE L2 2568 3271 -1 2408 81 0 0 chr2 41102121 41102418 -212154165 - AluY SINE Alu -14 297 1 241 406 0 9 chr2 41102631 41102737 -212153846 - L3 LINE CR1 -2 1575 1471 * 416 299 117 39 chr2 41102729 41102955 -212153628 - MIR SINE MIR -1 261 17 798 102 0 0 chr2 41102955 41103073 -212153510 + (CTATG)n Simple_repeat Simple_repeat 5 122 0 302 336 67 0 chr2 41103146 41103265 -212153318 - L3 LINE CR1 -211 1366 1240 276 116 116 29 chr2 41103290 41103359 -212153224 - L1ME4a LINE L1 -3 6118 6044 324 266 21 91 chr2 41103385 41103528 -212153055 - L3 LINE CR1 -578 999 867 1653 159 24 0 chr2 41103658 41103910 -212152673 - AluSx SINE Alu -54 258 1 630 350 138 35 chr2 41103918 41104484 -212152099 - L3 LINE CR1 -740 837 214 215 224 75 30 chr2 41105304 41105371 -212151212 + L2 LINE L2 3141 3210 -62 2199 152 8 37 chr2 41105523 41105744 -212150839 - MLT1A1 LTR MaLR 0 365 158 2383 85 0 7 chr2 41105744 41106049 -212150534 - AluSc SINE Alu -6 303 1 2199 152 8 37 chr2 41106049 41106203 -212150380 - MLT1A1 LTR MaLR -207 158 1 295 188 0 25 chr2 41106402 41106482 -212150101 + (CCCTAA)n Simple_repeat Simple_repeat 5 82 0 716 209 95 0 chr2 41107011 41107169 -212149414 - MER45A DNA AcHobo -5 173 1 295 248 80 80 chr2 41107174 41107311 -212149272 - MIR3 SINE MIR -69 139 3 933 193 74 72 chr2 41110145 41110218 -212146365 - L1MC5 LINE L1 -23 7938 7867 2230 96 0 3 chr2 41110218 41110509 -212146074 + AluSx SINE Alu 3 292 -20 933 193 74 72 chr2 41110509 41110866 -212145717 - L1MC5 LINE L1 -94 7867 7507 2554 155 39 45 chr2 41110873 41111384 -212145199 - L1MD3 LINE L1 0 7995 7488 2490 145 18 12 chr2 41111477 41111494 -212145089 - MER57A LTR ERV1 0 403 388 2095 133 10 0 chr2 41111494 41111803 -212144780 + AluSx SINE Alu 1 312 0 2490 145 18 12 chr2 41111803 41112186 -212144397 - MER57A LTR ERV1 -15 388 1 2194 131 0 0 chr2 41112504 41112809 -212143774 + AluSx SINE Alu 1 305 -7 1897 157 56 85 chr2 41112869 41113314 -212143269 - MSTB1 LTR MaLR 0 432 1 231 244 78 44 chr2 41113568 41113658 -212142925 - MIR SINE MIR -74 134 42 501 229 41 65 chr2 41116059 41116229 -212140354 + MIR3 SINE MIR 9 174 -34 465 268 56 114 chr2 41117352 41117658 -212138925 - MLT1I LTR MaLR -26 383 96 2890 143 11 72 chr2 41117854 41118203 -212138380 + L1MB7 LINE L1 5652 5956 -228 2221 119 0 13 chr2 41118203 41118513 -212138070 + AluSx SINE Alu 5 310 -2 2890 143 11 72 chr2 41118513 41118715 -212137868 + L1MB7 LINE L1 5956 6169 -15 1550 124 127 8 chr2 41119643 41119902 -212136681 - AluSg1 SINE Alu -13 296 7 371 153 0 0 chr2 41120883 41120942 -212135641 - L1MB2 LINE L1 -3 6168 6110 269 215 0 46 chr2 41121017 41121082 -212135501 + L2 LINE L2 3251 3312 -1 412 283 16 87 chr2 41121520 41121704 -212134879 + MER5B DNA MER1_type 8 178 0 786 239 6 0 chr2 41121781 41121944 -212134639 - MER5B DNA MER1_type 0 178 15 2292 173 64 25 chr2 41121964 41122404 -212134179 + LTR32 LTR ERVL 15 471 0 296 258 103 62 chr2 41122408 41122478 -212134105 + MER5A DNA MER1_type 58 135 -54 4247 139 30 16 chr2 41122478 41123168 -212133415 - L1MB2 LINE L1 -11 6160 5461 296 258 103 62 chr2 41123168 41123194 -212133389 + MER5A DNA MER1_type 135 158 -31 2257 122 0 3 chr2 41124165 41124476 -212132107 + AluJb SINE Alu 1 310 -2 240 269 21 21 chr2 41125740 41125833 -212130750 - MLT1J LTR MaLR -4 507 415 770 286 126 14 chr2 41125840 41126134 -212130449 - HERVL LTR ERVL -3005 2649 2323 6867 131 23 7 chr2 41126146 41128188 -212128395 - L1MA8 LINE L1 0 6291 4220 1835 313 103 26 chr2 41128188 41129320 -212127263 - HERVL LTR ERVL -3420 2344 1096 1553 113 26 22 chr2 41129568 41129671 -212126912 - MER30 DNA MER1_type 0 230 129 2217 107 0 19 chr2 41129671 41129981 -212126602 - AluSg SINE Alu -5 305 2 1553 113 26 22 chr2 41129981 41130106 -212126477 - MER30 DNA MER1_type -101 129 1 1464 164 125 21 chr2 41130459 41130739 -212125844 - AluJb SINE Alu -3 309 1 342 271 59 8 chr2 41131061 41131179 -212125404 - LTR67 LTR ERVL -3 554 431 414 328 30 52 chr2 41131276 41131508 -212125075 - LTR67 LTR ERVL -293 264 38 751 158 94 170 chr2 41131636 41131690 -212124893 - MLT2B1 LTR ERVL 0 520 464 2262 92 3 3 chr2 41131690 41131984 -212124599 + AluSp SINE Alu 1 294 -19 751 158 94 170 chr2 41131984 41131996 -212124587 - MLT2B1 LTR ERVL -56 464 453 192 40 0 0 chr2 41131996 41132021 -212124562 + (TA)n Simple_repeat Simple_repeat 2 26 0 751 158 94 170 chr2 41132021 41132456 -212124127 - MLT2B1 LTR ERVL -67 453 1 355 259 35 12 chr2 41133486 41133571 -212123012 + MIR SINE MIR 20 106 -156 4973 125 16 36 chr2 41133642 41133977 -212122606 - L1MA4A LINE L1 -1 6302 5962 2282 111 0 0 chr2 41133977 41134274 -212122309 - AluSx SINE Alu -15 297 1 4973 125 16 36 chr2 41134274 41134647 -212121936 - L1MA4A LINE L1 -341 5962 5611 1614 181 7 20 chr2 41134647 41134951 -212121632 - AluJo SINE Alu -12 300 1 4973 125 16 36 chr2 41134951 41135065 -212121518 - L1MA4A LINE L1 -692 5611 5496 8967 200 35 41 chr2 41135078 41135487 -212121096 - L1 LINE L1 -2616 4232 3822 2468 86 0 0 chr2 41135487 41135790 -212120793 - AluSx SINE Alu -9 303 1 8967 200 35 41 chr2 41135790 41136545 -212120038 - L1 LINE L1 -3026 3822 3065 1473 201 15 4 chr2 41136545 41136813 -212119770 - AluJb SINE Alu -39 273 3 8967 200 35 41 chr2 41136813 41138791 -212117792 - L1 LINE L1 -3783 3065 1103 180 0 0 0 chr2 41138791 41138811 -212117772 + (CTG)n Simple_repeat Simple_repeat 1 20 0 8967 200 35 41 chr2 41138811 41139068 -212117515 - L1 LINE L1 -5745 1103 846 415 282 75 17 chr2 41139144 41139318 -212117265 - LTR67 LTR ERVL -2 555 372 201 214 161 0 chr2 41141157 41141213 -212115370 + MIR SINE MIR 11 75 -187 243 88 0 0 chr2 41142062 41142096 -212114487 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 891 139 29 0 chr2 41142114 41142251 -212114332 - AluJo SINE Alu -171 141 1 1260 165 100 117 chr2 41143423 41143792 -212112791 + MLT1A1 LTR MaLR 1 363 -2 553 239 18 0 chr2 41143792 41143900 -212112683 - MER81 DNA DNA -1 113 3 282 338 92 14 chr2 41144017 41144159 -212112424 + MIR3 SINE MIR 17 169 -39 438 329 64 26 chr2 41144254 41144488 -212112095 - MIR SINE MIR -11 251 9 404 295 118 89 chr2 41145539 41145987 -212110596 + L2 LINE L2 2812 3272 0 180 237 0 0 chr2 41146005 41146043 -212110540 - L2 LINE L2 -10 3303 3266 2235 121 6 18 chr2 41146217 41146459 -212110124 - MER2 DNA MER2_type -10 335 97 4709 114 2 12 chr2 41146459 41147101 -212109482 - MER41B LTR ERV1 0 635 1 2235 121 6 18 chr2 41147101 41147197 -212109386 - MER2 DNA MER2_type -248 97 1 2255 96 0 10 chr2 41147751 41148042 -212108541 - AluSg SINE Alu -20 290 3 1630 184 0 54 chr2 41148049 41148364 -212108219 - AluJo SINE Alu -14 298 1 2217 113 3 10 chr2 41148475 41148786 -212107797 - AluSx SINE Alu -3 309 1 24 32 0 0 chr2 41148801 41148832 -212107751 + AT_rich Low_complexity Low_complexity 1 31 0 195 42 0 0 chr2 41149066 41149090 -212107493 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 43085 55 3 1 chr2 41149092 41155226 -212101357 - L1PA5 LINE L1 0 6154 11 2248 98 0 0 chr2 41155396 41155683 -212100900 + AluSc SINE Alu 1 287 -22 5512 136 38 24 chr2 41155706 41156697 -212099886 - L1MA4 LINE L1 -6 6294 5290 3180 159 5 10 chr2 41156704 41157284 -212099299 - L1 LINE L1 -775 5371 4795 244 352 37 37 chr2 41157348 41157456 -212099127 - MIR SINE MIR -62 146 39 629 321 87 0 chr2 41157784 41158002 -212098581 - MIR SINE MIR -20 242 6 712 121 0 0 chr2 41159165 41159256 -212097327 - AluSx SINE Alu -15 295 205 4198 135 98 92 chr2 41159257 41160636 -212095947 + pTR5 LTR ERV1 385 714 0 1319 106 106 0 chr2 41160636 41160825 -212095758 - AluSx SINE Alu -103 209 1 22 0 0 0 chr2 41160831 41160853 -212095730 + AT_rich Low_complexity Low_complexity 1 22 0 264 262 16 0 chr2 41160952 41161013 -212095570 + CT-rich Low_complexity Low_complexity 2 63 0 488 256 131 60 chr2 41161218 41161531 -212095052 - L1ME3A LINE L1 -264 5906 5575 2140 120 3 7 chr2 41162830 41163130 -212093453 - AluSx SINE Alu -13 299 1 1758 179 10 17 chr2 41163159 41163460 -212093123 + AluJb SINE Alu 1 299 -13 213 264 57 0 chr2 41163462 41163515 -212093068 - L3 LINE CR1 -8 1569 1514 267 241 0 0 chr2 41163515 41163569 -212093014 - MLT1H1 LTR MaLR 0 555 502 183 152 0 0 chr2 41163588 41163634 -212092949 + T-rich Low_complexity Low_complexity 1 46 0 3580 39 2 0 chr2 41163637 41164043 -212092540 - L1PA3 LINE L1 -3 6152 5746 597 198 114 28 chr2 41164176 41164416 -212092167 - MLT1H LTR MaLR -263 292 17 231 288 76 0 chr2 41165048 41165114 -212091469 + MER5A DNA MER1_type 119 189 0 1378 177 17 48 chr2 41165287 41165581 -212091002 - L1MB7 LINE L1 0 6184 5900 403 293 136 7 chr2 41166172 41166312 -212090271 - MIR3 SINE MIR -9 199 42 2244 120 7 0 chr2 41166540 41166848 -212089735 - AluSx SINE Alu -2 310 1 835 166 183 0 chr2 41166868 41167037 -212089546 - MER3 DNA MER1_type -4 205 6 508 281 91 41 chr2 41167046 41167267 -212089316 + MIR SINE MIR 29 260 -2 2236 116 6 3 chr2 41167303 41167614 -212088969 + AluSx SINE Alu 1 312 0 365 306 30 55 chr2 41168537 41168577 -212088006 + MIR3 SINE MIR 6 45 -163 1792 141 10 52 chr2 41168577 41168882 -212087701 - AluJo SINE Alu -20 292 1 365 306 30 55 chr2 41168882 41169040 -212087543 + MIR3 SINE MIR 45 199 -9 842 189 38 16 chr2 41169092 41169277 -212087306 + MER53 DNA DNA 1 189 0 411 318 64 92 chr2 41170446 41170617 -212085966 + L2 LINE L2 2817 2991 -281 2415 86 0 3 chr2 41170617 41170919 -212085664 - AluSp SINE Alu -12 301 1 411 318 64 92 chr2 41170919 41171215 -212085368 + L2 LINE L2 2991 3271 -1 571 253 69 17 chr2 41171812 41171986 -212084597 + MIR3 SINE MIR 20 202 -6 4905 202 51 95 chr2 41171998 41173065 -212083518 + MER69 DNA AcHobo 1 988 -1538 2190 133 0 0 chr2 41173065 41173374 -212083209 - AluSg SINE Alu -1 309 1 4905 202 51 95 chr2 41173374 41173763 -212082820 + MER69 DNA AcHobo 988 1393 -1133 1584 215 102 24 chr2 41173779 41174319 -212082264 + MER69 DNA AcHobo 1945 2526 0 453 196 399 0 chr2 41174333 41174466 -212082117 - MER5A DNA MER1_type 0 189 4 308 301 98 24 chr2 41174477 41174600 -212081983 - MER5A DNA MER1_type 0 189 58 421 228 0 0 chr2 41174610 41174689 -212081894 + L1ME LINE L1 5510 5588 -2220 284 191 85 64 chr2 41174704 41174798 -212081785 - LTR50 LTR ERVL -675 120 25 328 325 64 0 chr2 41174810 41174989 -212081594 + L1ME LINE L1 5600 5796 -325 2445 52 0 52 chr2 41175292 41175620 -212080963 + AluY SINE Alu 1 311 0 441 240 32 81 chr2 41175985 41176206 -212080377 - L1MC4 LINE L1 -2 8040 7831 3113 203 41 26 chr2 41176253 41176986 -212079597 - L1ME2 LINE L1 -10 6154 5411 23 0 0 0 chr2 41177007 41177030 -212079553 + AT_rich Low_complexity Low_complexity 1 23 0 3750 259 124 26 chr2 41177037 41178475 -212078108 - L1MC4 LINE L1 -3 8039 6460 688 268 32 5 chr2 41179608 41179798 -212076785 + MER117 DNA MER1_type 2 196 -1 338 281 62 25 chr2 41179982 41180142 -212076441 - MIR SINE MIR -6 256 91 397 284 71 30 chr2 41180196 41180365 -212076218 + MER5B DNA MER1_type 1 176 -2 270 357 136 14 chr2 41180388 41180601 -212075982 - MIR SINE MIR -4 258 20 294 311 25 33 chr2 41181099 41181221 -212075362 - L3 LINE CR1 -9 1568 1448 1981 93 0 19 chr2 41181223 41181491 -212075092 + AluSc SINE Alu 42 304 -5 539 231 37 0 chr2 41184181 41184289 -212072294 - MER81 DNA DNA -2 112 1 801 112 0 0 chr2 41184747 41184854 -212071729 - AluSg/x SINE Alu -13 297 191 1459 109 0 0 chr2 41234856 41235048 -212021535 - AluSq SINE Alu -117 196 5 1149 168 80 9 chr2 41235057 41235283 -212021300 - MER21B LTR ERV1 -227 636 395 690 302 15 0 chr2 41235552 41235757 -212020826 - MIR SINE MIR -10 252 45 1187 148 14 0 chr2 41236095 41236311 -212020272 - L1MD3 LINE L1 -10 7985 7767 1070 171 57 55 chr2 41236324 41236722 -212019861 - MLT1A1 LTR MaLR 0 365 11 3124 204 44 10 chr2 41236735 41237501 -212019082 - L1MC4a LINE L1 -227 7581 6790 4687 145 33 29 chr2 41237526 41238416 -212018167 - L1MC2 LINE L1 -8 6336 5444 339 342 0 33 chr2 41238639 41238791 -212017792 - HAL1b LINE L1 -653 695 549 323 138 0 15 chr2 41239201 41239266 -212017317 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 311 306 44 19 chr2 41239276 41239436 -212017147 + MLT1K LTR MaLR 411 574 -14 611 79 10 40 chr2 41241208 41241309 -212015274 - Tigger5 DNA MER2_type -91 2232 2135 2272 145 65 31 chr2 41241311 41241726 -212014857 + Tigger2a DNA MER2_type 3 431 -3 399 220 57 105 chr2 41241742 41241951 -212014632 + MLT1K LTR MaLR 378 576 -12 403 312 0 14 chr2 41241986 41242124 -212014459 - HAL1b LINE L1 -864 484 349 327 332 164 48 chr2 41242790 41243040 -212013543 - L2 LINE L2 -21 3251 2973 2369 82 3 13 chr2 41243295 41243599 -212012984 - AluSg SINE Alu -9 301 1 220 392 0 0 chr2 41243846 41243948 -212012635 - MIR SINE MIR -72 190 89 458 289 119 34 chr2 41244652 41244887 -212011696 + MIR SINE MIR 2 256 -6 23 33 0 0 chr2 41245381 41245411 -212011172 + AT_rich Low_complexity Low_complexity 1 30 0 198 242 21 116 chr2 41246221 41246316 -212010267 - L3 LINE CR1 -5 1572 1487 234 330 44 0 chr2 41246574 41246665 -212009918 - MIR3 SINE MIR -48 160 66 411 56 0 0 chr2 41247016 41247070 -212009513 + (CA)n Simple_repeat Simple_repeat 2 55 0 1055 130 43 133 chr2 41248743 41249008 -212007575 + MER33 DNA MER1_type 26 258 -2327 2011 159 3 0 chr2 41249008 41249317 -212007266 + AluJb SINE Alu 1 310 -2 1055 130 43 133 chr2 41249317 41249374 -212007209 + MER33 DNA MER1_type 258 319 -5 262 224 0 35 chr2 41249804 41249862 -212006721 + G-rich Low_complexity Low_complexity 2 57 0 1621 148 35 12 chr2 41250692 41251024 -212005559 - MER61C LTR ERV1 0 434 3 436 267 113 13 chr2 41251112 41251262 -212005321 + MER5A DNA MER1_type 25 189 0 679 288 20 14 chr2 41251343 41251559 -212005024 - MIR SINE MIR -14 248 26 10137 27 0 196 chr2 41251601 41253325 -212003258 - SVA Other Other 0 1386 1 256 269 75 0 chr2 41253466 41253533 -212003050 - MIR SINE MIR -98 110 39 1746 107 7 22 chr2 41253646 41253916 -212002667 - L1MA9 LINE L1 0 6312 6047 383 291 69 11 chr2 41254479 41254654 -212001929 - L1MC/D LINE L1 -1984 5824 5640 1688 107 25 0 chr2 41254658 41254900 -212001683 - L1PA14 LINE L1 -2 6159 5912 788 142 17 0 chr2 41254901 41255021 -212001562 + L1PA14 LINE L1 5826 5947 -214 * 991 267 43 8 chr2 41255003 41255306 -212001277 - L1MC/D LINE L1 -468 5653 5338 242 254 0 0 chr2 41256048 41256103 -212000480 + MER5A DNA MER1_type 60 114 -75 279 321 74 6 chr2 41258148 41258307 -211998276 - MIR3 SINE MIR -68 140 4 2374 77 44 0 chr2 41258839 41259137 -211997446 + AluY SINE Alu 1 311 0 262 215 92 15 chr2 41259144 41259209 -211997374 + MIR SINE MIR 20 89 -173 195 129 0 0 chr2 41259267 41259298 -211997285 + (TAA)n Simple_repeat Simple_repeat 1 31 0 243 262 78 39 chr2 41259307 41259410 -211997173 - MIR SINE MIR -6 256 150 305 369 37 33 chr2 41259443 41259687 -211996896 - L2 LINE L2 0 3272 3028 284 170 0 0 chr2 41260782 41260829 -211995754 + MIR SINE MIR 92 138 -70 1797 162 26 20 chr2 41260859 41261030 -211995553 - AluJb SINE Alu -7 305 130 2370 85 0 0 chr2 41261030 41261324 -211995259 - AluSc SINE Alu -11 298 5 1797 162 26 20 chr2 41261324 41261455 -211995128 - AluJb SINE Alu -182 130 1 494 297 62 34 chr2 41261539 41261748 -211994835 + MIR SINE MIR 48 262 0 183 366 35 63 chr2 41261963 41262105 -211994478 - L2 LINE L2 -1 3271 3134 781 288 60 0 chr2 41262464 41262697 -211993886 - MIR SINE MIR -4 258 12 2394 98 0 0 chr2 41263692 41263998 -211992585 + AluSx SINE Alu 1 306 -6 3001 145 30 35 chr2 41264922 41265461 -211991122 - L1MA9 LINE L1 0 6312 5777 198 191 0 0 chr2 41265468 41265510 -211991073 + (TA)n Simple_repeat Simple_repeat 2 43 0 306 50 0 0 chr2 41265581 41265621 -211990962 + (CA)n Simple_repeat Simple_repeat 1 40 0 1914 140 11 0 chr2 41266951 41267257 -211989326 + AluJb SINE Alu 1 309 0 2389 83 114 15 chr2 41267302 41267743 -211988840 + MER1A DNA MER1_type 1 523 -6 297 313 70 0 chr2 41267746 41267874 -211988709 + L1MC4a LINE L1 5769 5905 -1903 2205 85 7 0 chr2 41267997 41268308 -211988275 - AluSq SINE Alu 0 313 1 7404 110 58 31 chr2 41268552 41269750 -211986833 - Tigger3b DNA MER2_type -1 1230 1 269 303 136 8 chr2 41269893 41270025 -211986558 - MIR SINE MIR -50 212 64 230 317 50 0 chr2 41270068 41270128 -211986455 + MIR SINE MIR 87 149 -59 2306 86 7 3 chr2 41270726 41271027 -211985556 - AluSx SINE Alu -10 302 1 2353 148 101 13 chr2 41271062 41271528 -211985055 - MER74A LTR ERVL -51 507 1 22 0 0 0 chr2 41271963 41271985 -211984598 + AT_rich Low_complexity Low_complexity 1 22 0 2148 139 0 0 chr2 41272121 41272424 -211984159 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 41272739 41272760 -211983823 + AT_rich Low_complexity Low_complexity 1 21 0 237 178 0 0 chr2 41273166 41273211 -211983372 + T-rich Low_complexity Low_complexity 1 45 0 1838 203 68 62 chr2 41273943 41274445 -211982138 - MLT1D LTR MaLR 0 505 1 279 192 41 0 chr2 41274715 41274788 -211981795 + A-rich Low_complexity Low_complexity 4 79 0 1910 96 3 21 chr2 41274882 41275164 -211981419 - L1PA8 LINE L1 -2 6170 5894 8035 25 0 2 chr2 41275766 41277103 -211979480 - L1PA4 LINE L1 -5 6150 4814 3729 235 85 21 chr2 41277135 41278248 -211978335 + L2 LINE L2 1420 2604 -710 897 238 11 75 chr2 41278262 41278527 -211978056 + MIR SINE MIR 11 258 -4 6741 100 14 0 chr2 41278996 41279704 -211976879 + L1PA8 LINE L1 4457 5153 -1019 2118 133 7 0 chr2 41279704 41280012 -211976571 + AluSg SINE Alu 1 310 0 6741 100 14 0 chr2 41280012 41281028 -211975555 + L1PA8 LINE L1 5153 6164 -8 22 0 0 0 chr2 41281028 41281050 -211975533 + AT_rich Low_complexity Low_complexity 1 22 0 444 286 101 50 chr2 41282862 41283100 -211973483 - MIR SINE MIR -12 250 1 1379 283 216 26 chr2 41283134 41283519 -211973064 + L2 LINE L2 2013 2324 -990 2341 108 3 0 chr2 41283519 41283835 -211972748 - L1PA14 LINE L1 0 6161 5845 1379 283 216 26 chr2 41283835 41284259 -211972324 + L2 LINE L2 2324 2976 -338 262 301 52 52 chr2 41285459 41285595 -211970988 + L2 LINE L2 3132 3267 -5 210 329 32 111 chr2 41287080 41287296 -211969287 + L2 LINE L2 2981 3179 -93 319 278 8 52 chr2 41289611 41289894 -211966689 + G-rich Low_complexity Low_complexity 1 270 0 205 264 42 30 chr2 41289812 41289979 -211966604 + (CGGG)n Simple_repeat Simple_repeat 3 171 0 * 21 71 0 0 chr2 41290006 41290048 -211966535 + GC_rich Low_complexity Low_complexity 1 42 0 318 305 125 62 chr2 41290051 41290490 -211966093 + L1M2 LINE L1 941 1407 -5442 255 313 0 57 chr2 41290604 41290780 -211965803 + CT-rich Low_complexity Low_complexity 4 169 0 358 311 91 8 chr2 41292247 41292379 -211964204 - L3 LINE CR1 -3 1574 1432 248 331 55 31 chr2 41292512 41292675 -211963908 + MIR3 SINE MIR 41 207 -1 331 281 104 0 chr2 41292819 41292915 -211963668 + MIR3 SINE MIR 69 174 -34 348 343 90 45 chr2 41293732 41293977 -211962606 - L3 LINE CR1 -945 632 377 189 107 0 0 chr2 41294372 41294400 -211962183 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 384 286 10 10 chr2 41294416 41294514 -211962069 - L2 LINE L2 -39 3274 3177 227 216 91 11 chr2 41295676 41295764 -211960819 - Charlie7 DNA MER1_type -48 2564 2470 1572 169 10 59 chr2 41296599 41296906 -211959677 - AluJo SINE Alu -11 301 10 2866 133 17 0 chr2 41298285 41298750 -211957833 + L1PB1 LINE L1 5678 6150 -1 21 0 0 0 chr2 41298750 41298771 -211957812 + AT_rich Low_complexity Low_complexity 1 21 0 1492 188 7 22 chr2 41299864 41300140 -211956443 - AluJo SINE Alu -18 294 23 318 267 0 11 chr2 41300274 41300364 -211956219 - MLT1L LTR MaLR -15 600 512 991 157 31 14 chr2 41300567 41300790 -211955793 - MLT1L LTR MaLR -348 267 41 263 279 0 13 chr2 41302038 41302117 -211954466 + GA-rich Low_complexity Low_complexity 3 80 0 2684 155 71 2 chr2 41302249 41302758 -211953825 + L1MB5 LINE L1 5585 6128 -46 354 376 43 8 chr2 41302857 41303091 -211953492 + L2 LINE L2 2814 3055 -217 520 329 12 6 chr2 41304153 41304323 -211952260 + MIR3 SINE MIR 36 206 -2 450 260 62 45 chr2 41306008 41306185 -211950398 + MIR3 SINE MIR 20 199 -9 240 235 121 54 chr2 41308359 41308525 -211948058 - L1ME4a LINE L1 0 6121 5945 319 277 108 51 chr2 41308665 41309024 -211947559 + L2 LINE L2 2671 3058 -214 237 346 57 66 chr2 41309071 41309406 -211947177 + L2 LINE L2 2642 2973 -341 247 211 0 18 chr2 41309548 41309605 -211946978 + L2 LINE L2 3184 3239 -74 477 0 0 0 chr2 41311042 41311095 -211945488 + (TG)n Simple_repeat Simple_repeat 2 54 0 739 235 146 3 chr2 41311935 41312168 -211944415 + MIR SINE MIR 1 261 -1 311 311 140 12 chr2 41312178 41312342 -211944241 + MIR SINE MIR 78 262 0 202 143 0 0 chr2 41313523 41313558 -211943025 + L2 LINE L2 3238 3272 0 927 138 22 11 chr2 41313609 41313790 -211942793 + L1MB3 LINE L1 5956 6138 -45 4322 249 89 17 chr2 41313795 41315520 -211941063 + L1M3c LINE L1 2 1850 -4361 1729 158 3 46 chr2 41315521 41315887 -211940696 + L1MA9 LINE L1 5454 5803 -509 319 125 0 0 chr2 41315894 41315950 -211940633 - L1M1 LINE L1 -514 5788 5733 186 103 0 0 chr2 41316011 41316040 -211940543 + (TA)n Simple_repeat Simple_repeat 1 29 0 2521 127 26 45 chr2 41316040 41316530 -211940053 + L1MA9 LINE L1 5794 6274 -38 355 103 0 0 chr2 41316530 41316587 -211939996 + L1MB2 LINE L1 6114 6171 0 610 275 41 12 chr2 41316737 41316908 -211939675 - MIR SINE MIR -7 255 80 934 122 0 0 chr2 41317083 41317222 -211939361 + AluY SINE Alu 173 311 0 267 103 0 0 chr2 41318226 41318265 -211938318 + (TAA)n Simple_repeat Simple_repeat 2 40 0 508 225 172 13 chr2 41318285 41318436 -211938147 - MIR SINE MIR -57 205 31 639 173 6 32 chr2 41318675 41318831 -211937752 + MER33 DNA MER1_type 27 178 -146 274 243 43 0 chr2 41318860 41318930 -211937653 + MER33 DNA MER1_type 291 363 0 29 60 0 0 chr2 41319985 41320035 -211936548 + AT_rich Low_complexity Low_complexity 1 50 0 710 243 133 13 chr2 41320497 41320723 -211935860 - MIR SINE MIR -8 254 2 300 189 47 104 chr2 41322348 41322454 -211934129 + MIR SINE MIR 89 188 -74 4074 211 79 31 chr2 41322454 41323105 -211933478 - L1 LINE L1 -2211 4433 3815 1843 166 0 3 chr2 41323105 41323389 -211933194 - AluSx SINE Alu -13 299 17 4074 211 79 31 chr2 41323389 41323538 -211933045 - L1 LINE L1 -2829 3815 3675 1931 149 7 3 chr2 41323538 41323833 -211932750 - AluJo SINE Alu -15 297 2 4074 211 79 31 chr2 41323833 41326539 -211930044 - L1 LINE L1 -2969 3675 684 24 0 0 0 chr2 41326801 41326825 -211929758 + AT_rich Low_complexity Low_complexity 1 24 0 657 276 17 11 chr2 41326853 41327034 -211929549 + MER5A DNA MER1_type 2 183 -6 254 0 26 0 chr2 41330722 41330760 -211925823 - L1PB2 LINE L1 -7 6144 6106 2285 98 20 0 chr2 41331543 41331840 -211924743 - AluSx SINE Alu -5 307 5 494 249 333 4 chr2 41332024 41332488 -211924095 - L2 LINE L2 0 3313 2717 2733 16 3 0 chr2 41332488 41332795 -211923788 - AluY SINE Alu -3 308 1 257 279 15 0 chr2 41334530 41334598 -211921985 + GA-rich Low_complexity Low_complexity 5 73 0 185 247 65 86 chr2 41334874 41334967 -211921616 + L2 LINE L2 1130 1220 -2094 23 68 0 0 chr2 41335363 41335407 -211921176 + AT_rich Low_complexity Low_complexity 1 44 0 1119 237 32 16 chr2 41335804 41336116 -211920467 - MER46C DNA MER2_type 0 338 22 333 0 0 0 chr2 41336120 41336157 -211920426 + (TG)n Simple_repeat Simple_repeat 2 38 0 198 0 0 0 chr2 41336741 41336763 -211919820 + (TC)n Simple_repeat Simple_repeat 2 23 0 214 354 0 15 chr2 41337288 41337353 -211919230 + L2 LINE L2 3244 3307 -6 2056 136 71 8 chr2 41337462 41337829 -211918754 + MLT1B LTR MaLR 1 390 0 459 317 56 22 chr2 41339021 41339201 -211917382 - MIR3 SINE MIR 0 208 23 313 282 35 0 chr2 41340859 41340944 -211915639 + L2 LINE L2 3185 3272 0 250 236 0 18 chr2 41342267 41342322 -211914261 + CT-rich Low_complexity Low_complexity 1 54 0 581 223 51 40 chr2 41342399 41342574 -211914009 + MER5B DNA MER1_type 1 177 -1 391 231 149 0 chr2 41342624 41342745 -211913838 - MIR SINE MIR -12 250 112 485 209 45 18 chr2 41343980 41344090 -211912493 - L2 LINE L2 -10 3303 3191 236 348 176 10 chr2 41344499 41344801 -211911782 + L2 LINE L2 2921 3272 0 528 312 108 50 chr2 41345601 41345790 -211910793 - L2 LINE L2 -410 2904 2727 1622 155 59 33 chr2 41345790 41346094 -211910489 + AluJo SINE Alu 1 312 0 528 312 108 50 chr2 41346094 41346340 -211910243 - L2 LINE L2 -587 2727 2444 204 97 0 0 chr2 41347489 41347520 -211909063 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 261 275 29 14 chr2 41347757 41347826 -211908757 - MIR SINE MIR -105 157 88 531 259 117 125 chr2 41350024 41350649 -211905934 - L2 LINE L2 -1 3312 2708 192 179 0 0 chr2 41351383 41351422 -211905161 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 5864 54 9 0 chr2 41351645 41352382 -211904201 - L1PA6 LINE L1 0 6154 5411 797 293 123 23 chr2 41353107 41353537 -211903046 - LTR67 LTR ERVL -9 548 76 292 375 40 10 chr2 41353844 41354044 -211902539 + LTR16C LTR ERVL 193 398 -93 382 309 24 18 chr2 41354134 41354299 -211902284 - ERVL LTR ERVL -696 5068 4903 889 311 111 19 chr2 41354822 41355337 -211901246 - ERVL LTR ERVL -787 4867 4306 1342 191 85 59 chr2 41355355 41355779 -211900804 - MSTB2 LTR MaLR 0 457 23 1532 281 116 36 chr2 41355788 41356909 -211899674 - ERVL LTR ERVL -1383 4271 3061 427 294 94 21 chr2 41356975 41357210 -211899373 - ERVL LTR ERVL -3381 2383 2132 488 216 0 20 chr2 41357211 41357313 -211899270 + L2 LINE L2 1399 1498 -1816 3832 247 61 78 chr2 41357904 41359303 -211897280 + L2 LINE L2 1485 2859 -455 518 200 0 43 chr2 41359307 41359422 -211897161 - MER20 DNA MER1_type -105 114 5 526 315 14 18 chr2 41359720 41359942 -211896641 - LTR67 LTR ERVL -8 549 329 386 236 22 0 chr2 41359983 41360072 -211896511 - LTR67 LTR ERVL -434 123 33 515 302 159 3 chr2 41361985 41362356 -211894227 - L2 LINE L2 -922 2392 1964 1843 154 7 7 chr2 41362360 41362652 -211893931 + AluJb SINE Alu 1 292 -20 475 137 40 0 chr2 41362667 41362791 -211893792 + (TA)n Simple_repeat Simple_repeat 1 129 0 659 295 180 20 chr2 41363131 41363727 -211892856 + L2 LINE L2 2596 3285 -28 436 163 35 39 chr2 41363936 41364051 -211892532 + L1MC/D LINE L1 5548 5660 -461 413 281 43 7 chr2 41364091 41364230 -211892353 - MIR SINE MIR -4 258 115 235 245 95 28 chr2 41364271 41364468 -211892115 + L1MC/D LINE L1 5686 5894 -227 204 97 0 0 chr2 41364684 41364715 -211891868 + (TTTTC)n Simple_repeat Simple_repeat 4 34 0 1515 204 41 20 chr2 41364794 41365088 -211891495 - AluJo SINE Alu -10 302 3 181 304 0 0 chr2 41365375 41365421 -211891162 + L2 LINE L2 2867 2912 -401 493 291 209 0 chr2 41366036 41366242 -211890341 - MIR SINE MIR -10 252 4 563 293 0 46 chr2 41366770 41366944 -211889639 + MER5B DNA MER1_type 3 168 -10 2745 125 19 21 chr2 41367525 41367958 -211888625 + MSTB1 LTR MaLR 1 432 0 289 262 71 0 chr2 41368014 41368098 -211888485 + MIR SINE MIR 56 145 -117 819 229 157 0 chr2 41369973 41370183 -211886400 + MIR SINE MIR 14 256 -6 403 125 0 0 chr2 41370380 41370436 -211886147 + MER5A DNA MER1_type 1 56 -133 278 241 51 13 chr2 41370438 41370517 -211886066 - MER5A DNA MER1_type -12 177 96 681 281 110 6 chr2 41370941 41371269 -211885314 - HAL1b LINE L1 -525 823 462 1218 198 176 10 chr2 41371743 41372259 -211884324 + MER114 LTR ERV 47 648 0 2236 81 46 0 chr2 41372499 41372782 -211883801 + AluSc SINE Alu 1 296 -13 1517 163 57 50 chr2 41372784 41373085 -211883498 + AluJo SINE Alu 1 303 -9 5387 119 28 0 chr2 41373677 41374540 -211882043 - L1PA11 LINE L1 0 6174 5285 1845 134 8 0 chr2 41374540 41374802 -211881781 + AluSx SINE Alu 38 301 -11 1918 134 23 33 chr2 41375760 41376066 -211880517 - AluSx SINE Alu -9 303 1 511 275 101 50 chr2 41376266 41376484 -211880099 - MIR SINE MIR -27 235 7 21 36 0 0 chr2 41376876 41376904 -211879679 + AT_rich Low_complexity Low_complexity 1 28 0 2008 247 226 37 chr2 41376995 41377996 -211878587 + L2 LINE L2 1522 2711 -603 342 155 17 0 chr2 41378849 41378907 -211877676 - MER81 DNA DNA -1 113 55 898 266 200 0 chr2 41380147 41380452 -211876131 - L2 LINE L2 -1563 1751 1386 885 56 0 0 chr2 41380459 41380567 -211876016 + AluY SINE Alu 190 297 -14 499 226 133 15 chr2 41380569 41380764 -211875819 - L2 LINE L2 -2257 1057 840 270 0 0 0 chr2 41380988 41381018 -211875565 + (TAA)n Simple_repeat Simple_repeat 1 30 0 854 233 287 15 chr2 41381041 41381445 -211875138 - L2 LINE L2 -2461 853 340 24 0 0 0 chr2 41382252 41382276 -211874307 + AT_rich Low_complexity Low_complexity 1 24 0 24 0 0 0 chr2 41383062 41383086 -211873497 + AT_rich Low_complexity Low_complexity 1 24 0 418 333 14 0 chr2 41383112 41383259 -211873324 + HAL1 LINE L1 1112 1260 -1247 36 40 0 0 chr2 41383336 41383386 -211873197 + AT_rich Low_complexity Low_complexity 1 50 0 618 302 56 14 chr2 41383434 41383649 -211872934 - MIR SINE MIR 0 262 39 420 287 18 30 chr2 41383699 41383948 -211872635 + HAL1b LINE L1 335 1602 -765 384 312 40 8 chr2 41387289 41387414 -211869169 + L2 LINE L2 2229 2357 -957 248 324 20 20 chr2 41387468 41387570 -211869013 + L2 LINE L2 2211 2312 -1002 224 337 186 12 chr2 41387771 41387943 -211868640 + L2 LINE L2 2691 2892 -422 254 339 82 29 chr2 41388000 41388171 -211868412 + L2 LINE L2 2837 3016 -256 517 286 161 14 chr2 41388301 41388518 -211868065 - MIR SINE MIR -13 249 1 28 107 0 0 chr2 41389053 41389165 -211867418 + AT_rich Low_complexity Low_complexity 1 112 0 2173 125 0 0 chr2 41389241 41389536 -211867047 - AluSg SINE Alu -15 295 1 36 53 0 0 chr2 41389584 41389641 -211866942 + AT_rich Low_complexity Low_complexity 1 57 0 2807 3 0 0 chr2 41391401 41391704 -211864879 + AluYa5 SINE Alu 1 303 -8 2035 109 4 0 chr2 41393498 41393764 -211862819 + AluSx SINE Alu 1 267 -45 294 356 11 23 chr2 41395806 41395983 -211860600 - MIR SINE MIR 0 262 88 305 149 35 0 chr2 41397608 41397722 -211858861 + (TA)n Simple_repeat Simple_repeat 2 119 0 3157 144 40 62 chr2 41397978 41398596 -211857987 + MER6A DNA MER2_type 1 605 0 1504 211 14 11 chr2 41399076 41399355 -211857228 + AluJb SINE Alu 1 280 -32 2164 90 47 17 chr2 41399566 41399865 -211856718 + AluSx SINE Alu 1 308 -4 489 93 9 75 chr2 41400354 41400461 -211856122 + L1MC5 LINE L1 7300 7399 -562 2310 95 10 0 chr2 41400473 41400769 -211855814 - AluSx SINE Alu -13 299 1 287 286 20 41 chr2 41400938 41401036 -211855547 + MER5A DNA MER1_type 92 187 -2 461 348 82 10 chr2 41401207 41401414 -211855169 - MIR SINE MIR -17 245 24 268 265 129 30 chr2 41401533 41401665 -211854918 + MIR SINE MIR 117 261 -1 321 313 40 27 chr2 41401817 41401967 -211854616 - L3b LINE CR1 -174 1409 1258 825 250 42 24 chr2 41402107 41402319 -211854264 + MIR SINE MIR 46 261 -1 234 273 0 39 chr2 41402728 41402805 -211853778 - MIR SINE MIR -44 218 145 444 123 0 0 chr2 41403415 41403488 -211853095 + (GGGAGA)n Simple_repeat Simple_repeat 1 73 0 472 201 157 30 chr2 41403577 41403711 -211852872 - MIR3 SINE MIR -14 194 44 222 200 0 0 chr2 41404220 41404265 -211852318 + C-rich Low_complexity Low_complexity 4 48 0 1962 117 0 0 chr2 41404362 41404643 -211851940 - AluJb SINE Alu -11 301 21 189 353 103 9 chr2 41404850 41404966 -211851617 - L2 LINE L2 -1 3312 3186 210 349 110 7 chr2 41406441 41406587 -211849996 + L2 LINE L2 2898 3058 -214 2017 119 154 5 chr2 41406907 41407277 -211849306 - MSTA LTR MaLR -2 426 2 504 48 0 0 chr2 41407630 41407693 -211848890 + (CA)n Simple_repeat Simple_repeat 1 63 0 261 233 17 0 chr2 41407700 41407760 -211848823 + LTR67 LTR ERVL 497 557 0 24 53 0 0 chr2 41409330 41409368 -211847215 + AT_rich Low_complexity Low_complexity 1 38 0 1920 119 11 0 chr2 41410534 41410795 -211845788 + AluSx SINE Alu 29 292 -20 6037 144 43 52 chr2 41411286 41412186 -211844397 + Tigger3b DNA MER2_type 2 889 -2139 221 57 29 0 chr2 41412186 41412221 -211844362 + (CTCA)n Simple_repeat Simple_repeat 3 38 0 6037 144 43 52 chr2 41412221 41412561 -211844022 + Tigger3b DNA MER2_type 889 1231 0 21 71 0 0 chr2 41412874 41412916 -211843667 + AT_rich Low_complexity Low_complexity 1 42 0 2394 90 3 0 chr2 41412916 41413217 -211843366 - AluSp SINE Alu -11 302 1 284 222 80 108 chr2 41413243 41413419 -211843164 + L3b LINE CR1 1115 1285 -298 921 130 35 75 chr2 41413772 41413819 -211842764 - L1MB2 LINE L1 0 6171 6124 2155 111 7 7 chr2 41413819 41414117 -211842466 - AluSq SINE Alu -15 298 1 921 130 35 75 chr2 41414117 41414187 -211842396 - L1MB2 LINE L1 -47 6124 6053 5481 154 20 34 chr2 41414187 41415273 -211841310 - MER11C LTR ERVK 0 1071 1 921 130 35 75 chr2 41415273 41415354 -211841229 - L1MB2 LINE L1 -118 6053 5980 223 261 174 0 chr2 41415420 41415489 -211841094 + L2 LINE L2 3230 3310 -3 658 205 25 0 chr2 41415530 41415652 -211840931 - LTR12 LTR ERV1 -228 486 362 255 194 0 42 chr2 41415652 41415724 -211840859 - LTR30 LTR ERV1 -98 624 556 303 139 89 13 chr2 41415724 41415803 -211840780 - LTR12 LTR ERV1 -425 289 205 1200 130 88 5 chr2 41415842 41416058 -211840525 - LTR12 LTR ERV1 -480 234 1 474 256 26 0 chr2 41416206 41416323 -211840260 - MER5B DNA MER1_type -19 159 40 227 278 117 39 chr2 41416400 41416580 -211840003 + MLT1L LTR MaLR 198 391 -224 183 80 0 0 chr2 41416593 41416618 -211839965 + (A)n Simple_repeat Simple_repeat 1 25 0 425 240 67 101 chr2 41417074 41417282 -211839301 - L2 LINE L2 0 3313 3113 217 311 33 0 chr2 41417730 41417791 -211838792 - L2 LINE L2 -50 3263 3201 2698 96 64 10 chr2 41419581 41419987 -211836596 - MSTA LTR MaLR 0 428 1 1538 104 26 4 chr2 41420271 41420711 -211835872 + LTR54 LTR ERV1 1 510 0 631 299 4 58 chr2 41421254 41421515 -211835068 - MIR SINE MIR -13 249 3 7323 48 0 0 chr2 41421663 41422705 -211833878 - L1PA6 LINE L1 -2 6152 5111 829 228 39 0 chr2 41422951 41423131 -211833452 - MER58A DNA MER1_type 0 224 38 1192 172 112 4 chr2 41423187 41423419 -211833164 + MER1B DNA MER1_type 1 257 -82 462 198 170 0 chr2 41423419 41423525 -211833058 + MIR SINE MIR 22 145 -117 450 278 69 60 chr2 41423769 41424205 -211832378 - HAL1 LINE L1 -838 1669 1230 232 308 145 31 chr2 41425527 41425686 -211830897 + L3b LINE CR1 1388 1564 -19 2126 153 71 5 chr2 41426245 41426638 -211829945 - MSTB LTR MaLR 0 426 8 425 164 15 0 chr2 41426741 41426808 -211829775 - Alu SINE Alu -26 284 217 749 273 110 57 chr2 41426920 41426964 -211829619 - L1MDa LINE L1 -4136 2174 2134 1711 139 17 28 chr2 41426964 41427252 -211829331 + AluSx SINE Alu 1 285 -27 201 74 0 0 chr2 41427252 41427279 -211829304 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 749 273 110 57 chr2 41427279 41428460 -211828123 - L1MDa LINE L1 -4176 2134 844 10585 204 24 11 chr2 41428460 41431753 -211824830 - L1PA15 LINE L1 -3 6813 3460 749 273 110 57 chr2 41431753 41431772 -211824811 - L1MDa LINE L1 -5466 844 827 28906 113 11 55 chr2 41431787 41438210 -211818373 - L1PA7 LINE L1 -11 6143 13 3799 239 43 29 chr2 41438223 41439142 -211817441 - L1PA15 LINE L1 -3325 3472 2568 2235 130 0 13 chr2 41439142 41439458 -211817125 + AluSx SINE Alu 1 312 0 3799 239 43 29 chr2 41439458 41439552 -211817031 - L1PA15 LINE L1 -4229 2568 2477 2876 102 18 27 chr2 41439552 41439991 -211816592 + L1PA11 LINE L1 5739 6173 -1 3799 239 43 29 chr2 41439991 41441229 -211815354 - L1PA15 LINE L1 -4320 2477 1185 400 367 45 45 chr2 41441328 41441704 -211814879 - L1MDa LINE L1 -5295 824 449 496 321 141 12 chr2 41442361 41442688 -211813895 - L2 LINE L2 -1348 1966 1598 1691 200 25 28 chr2 41442818 41443173 -211813410 - MLT1A1 LTR MaLR 0 365 12 2240 112 0 0 chr2 41443768 41444064 -211812519 + AluSq SINE Alu 1 296 -17 387 0 0 0 chr2 41444076 41444119 -211812464 + (TA)n Simple_repeat Simple_repeat 2 44 0 808 250 126 32 chr2 41444432 41444589 -211811994 + HsTC2 DNA Tc2 1161 1302 -596 1009 202 0 6 chr2 41444589 41444762 -211811821 - FAM SINE Alu -3 172 1 808 250 126 32 chr2 41444762 41444984 -211811599 + HsTC2 DNA Tc2 1302 1752 -146 668 242 102 9 chr2 41445049 41445264 -211811319 - L1MC/D LINE L1 -1992 5816 5582 909 266 31 12 chr2 41446905 41447077 -211809506 + MIR SINE MIR 2 182 -80 1358 198 39 94 chr2 41447077 41447461 -211809122 - MLT1A1 LTR MaLR -2 363 1 909 266 31 12 chr2 41447461 41447544 -211809039 + MIR SINE MIR 182 262 0 269 271 28 21 chr2 41447615 41447759 -211808824 + GA-rich Low_complexity Low_complexity 3 147 0 5426 125 37 13 chr2 41448078 41449058 -211807525 - L1MA8 LINE L1 -6 6285 5290 28645 118 11 56 chr2 41449071 41455507 -211801076 - L1PA7 LINE L1 -4 6150 13 12854 187 27 15 chr2 41455517 41458524 -211798059 - L1M1 LINE L1 -813 6752 3710 7938 229 34 12 chr2 41458520 41461183 -211795400 - L1 LINE L1 -1779 5069 2347 * 3333 205 78 14 chr2 41461201 41461213 -211795370 - L1PBb LINE L1 -4706 2142 2132 2185 140 0 13 chr2 41461213 41461527 -211795056 - AluSx SINE Alu -2 310 1 3333 205 78 14 chr2 41461527 41462409 -211794174 - L1PBb LINE L1 -4716 2132 1098 492 281 42 35 chr2 41462671 41462931 -211793652 - L1PBb LINE L1 -5792 1057 796 310 342 0 0 chr2 41462936 41463015 -211793568 - L1PBb LINE L1 -6353 496 418 * 417 282 21 70 chr2 41462999 41463141 -211793442 - L1 LINE L1 -6018 831 697 276 30 0 0 chr2 41463856 41463889 -211792694 + (TG)n Simple_repeat Simple_repeat 1 33 0 782 304 18 11 chr2 41463890 41464170 -211792413 - L1PBb LINE L1 -6558 291 10 906 218 75 77 chr2 41464179 41464660 -211791923 - L1M1 LINE L1 -3956 3609 3130 731 298 99 66 chr2 41464802 41465182 -211791401 - L1ME2 LINE L1 -283 5881 5472 2454 62 0 3 chr2 41465182 41465486 -211791097 - AluY SINE Alu -8 303 1 731 298 99 66 chr2 41465486 41465709 -211790874 - L1ME2 LINE L1 -692 5472 5258 385 195 0 35 chr2 41466028 41466141 -211790442 + (TA)n Simple_repeat Simple_repeat 1 109 0 1890 132 33 36 chr2 41466141 41466445 -211790138 - AluJb SINE Alu -8 304 2 198 0 0 0 chr2 41466645 41466667 -211789916 + (GA)n Simple_repeat Simple_repeat 2 23 0 322 225 14 14 chr2 41467679 41467750 -211788833 + L2 LINE L2 3239 3309 -4 297 0 0 0 chr2 41467957 41467990 -211788593 + (TA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr2 41467990 41468011 -211788572 + (T)n Simple_repeat Simple_repeat 1 21 0 30 27 0 0 chr2 41468244 41468281 -211788302 + AT_rich Low_complexity Low_complexity 1 37 0 2070 159 43 66 chr2 41468539 41469056 -211787527 - MLT1D LTR MaLR 0 505 1 2075 118 70 17 chr2 41469120 41469476 -211787107 + THE1C LTR MaLR 1 375 0 303 113 0 0 chr2 41470019 41470072 -211786511 + (TG)n Simple_repeat Simple_repeat 2 54 0 183 156 0 0 chr2 41470892 41470924 -211785659 + T-rich Low_complexity Low_complexity 2 33 0 383 260 169 32 chr2 41471817 41471971 -211784612 - MER5A DNA MER1_type -6 183 9 2419 73 0 3 chr2 41472323 41472648 -211783935 - AluSg SINE Alu 0 334 11 279 232 162 10 chr2 41473244 41473343 -211783240 - L2 LINE L2 -8 3305 3192 202 283 0 0 chr2 41473756 41473809 -211782774 + L2 LINE L2 2313 2365 -949 427 111 0 0 chr2 41473816 41473888 -211782695 - L1MB2 LINE L1 -211 5960 5889 27 49 0 0 chr2 41473935 41473976 -211782607 + AT_rich Low_complexity Low_complexity 1 41 0 1531 189 7 46 chr2 41474010 41474316 -211782267 - AluJb SINE Alu -12 300 7 385 307 146 28 chr2 41474359 41474571 -211782012 - L2 LINE L2 -704 2610 2374 214 171 37 37 chr2 41474615 41474697 -211781886 + (TATAA)n Simple_repeat Simple_repeat 4 85 0 444 294 123 25 chr2 41474702 41475059 -211781524 + L1ME LINE L1 5311 5702 -419 263 330 47 0 chr2 41476982 41477088 -211779495 + MIR3 SINE MIR 70 180 -28 200 159 0 23 chr2 41477339 41477383 -211779200 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 204 40 0 0 chr2 41477383 41477408 -211779175 + (CA)n Simple_repeat Simple_repeat 2 26 0 733 192 0 15 chr2 41477412 41477542 -211779041 - FLAM_A SINE Alu -5 128 1 269 113 72 201 chr2 41477948 41478142 -211778441 - MER53 DNA DNA -20 169 1 232 265 99 37 chr2 41478409 41478571 -211778012 - L1ME LINE L1 -342 5779 5608 186 167 0 0 chr2 41479302 41479338 -211777245 + A-rich Low_complexity Low_complexity 2 37 0 438 179 104 37 chr2 41479767 41479901 -211776682 - MER103 DNA DNA -8 158 16 807 180 160 16 chr2 41481066 41481260 -211775323 - MER58A DNA MER1_type -2 222 1 685 276 38 66 chr2 41481521 41481875 -211774708 + L1MEc LINE L1 1896 2258 -3957 476 75 25 25 chr2 41481875 41481955 -211774628 + MADE1 DNA Mariner 1 80 0 685 276 38 66 chr2 41481955 41482398 -211774185 + L1MEc LINE L1 2258 2644 -3571 346 279 150 13 chr2 41482498 41482789 -211773794 + L3 LINE CR1 436 829 -748 658 212 92 102 chr2 41482844 41483016 -211773567 - L1ME3 LINE L1 -21 6141 5972 3689 191 97 16 chr2 41483016 41483811 -211772772 - MER21B LTR ERV1 0 863 5 658 212 92 102 chr2 41483811 41483921 -211772662 - L1ME3 LINE L1 -190 5972 5862 695 242 213 2 chr2 41483941 41484383 -211772200 - L1ME3 LINE L1 -1538 4608 4074 3258 170 39 8 chr2 41484426 41485013 -211771570 - MER6A DNA MER2_type 0 605 1 504 330 121 59 chr2 41485137 41485320 -211771263 + L3 LINE CR1 1001 1171 -406 1321 151 29 129 chr2 41485320 41485694 -211770889 + THE1C LTR MaLR 1 330 -45 2051 128 14 7 chr2 41485694 41485991 -211770592 - AluSq SINE Alu -14 299 1 1321 151 29 129 chr2 41485991 41486033 -211770550 + THE1C LTR MaLR 330 375 0 504 330 121 59 chr2 41486033 41486388 -211770195 + L3 LINE CR1 1171 1572 -5 661 279 31 22 chr2 41486685 41486911 -211769672 + MIR SINE MIR 6 233 -29 2075 138 42 17 chr2 41486926 41487281 -211769302 + THE1B LTR MaLR 1 364 0 7503 179 84 5 chr2 41487283 41488812 -211767771 + THE1B-int LTR MaLR 3 1651 0 2379 114 31 17 chr2 41488812 41489171 -211767412 + THE1B LTR MaLR 1 364 0 417 86 0 0 chr2 41489626 41489684 -211766899 + (CA)n Simple_repeat Simple_repeat 1 58 0 2600 176 17 0 chr2 41490407 41490867 -211765716 + MER70B LTR ERVL 1 468 -110 25 0 0 0 chr2 41491834 41491859 -211764724 + AT_rich Low_complexity Low_complexity 1 25 0 237 256 0 0 chr2 41492290 41492372 -211764211 + (TA)n Simple_repeat Simple_repeat 1 82 0 323 375 72 16 chr2 41492488 41492739 -211763844 + HAL1b LINE L1 221 485 -863 303 280 83 61 chr2 41493221 41493353 -211763230 + L2 LINE L2 2847 2981 -291 394 262 25 99 chr2 41493360 41493562 -211763021 + L2 LINE L2 3085 3271 -1 375 316 72 34 chr2 41496306 41496425 -211760158 + L1ME4a LINE L1 5635 5748 -373 495 0 0 0 chr2 41496425 41496480 -211760103 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 2116 92 14 11 chr2 41496482 41496765 -211759818 - AluSp SINE Alu -29 284 1 375 316 72 34 chr2 41496765 41496905 -211759678 + L1ME4a LINE L1 5748 5907 -214 372 205 17 17 chr2 41497119 41497236 -211759347 + CT-rich Low_complexity Low_complexity 2 118 0 866 206 0 26 chr2 41497381 41497575 -211759008 - MER5A DNA MER1_type 0 189 1 326 319 5 69 chr2 41498367 41498555 -211758028 - MIR SINE MIR -79 183 8 561 68 0 0 chr2 41498708 41498782 -211757801 + (TA)n Simple_repeat Simple_repeat 2 75 0 2230 112 0 0 chr2 41498782 41499078 -211757505 - AluSq SINE Alu -17 296 1 1335 236 47 25 chr2 41499924 41500327 -211756256 - MER92A LTR ERV1 0 412 1 266 253 179 11 chr2 41500404 41500499 -211756084 + MER5A DNA MER1_type 73 183 -6 437 286 75 12 chr2 41500525 41500686 -211755897 + MIR SINE MIR 37 207 -55 2110 130 0 3 chr2 41500804 41501105 -211755478 - AluSx SINE Alu -1 311 12 7192 110 26 3 chr2 41501144 41502281 -211754302 - L1PA8A LINE L1 -1341 4805 3639 6179 79 3 32 chr2 41502281 41503626 -211752957 + L1PA8A LINE L1 4809 6130 -1 7192 110 26 3 chr2 41503626 41503637 -211752946 - L1P LINE L1 -2507 3639 3630 214 250 29 29 chr2 41504339 41504407 -211752176 + CT-rich Low_complexity Low_complexity 2 69 0 1868 201 81 0 chr2 41504836 41505230 -211751353 + L1MB5 LINE L1 5697 6122 -52 1826 154 74 3 chr2 41505753 41506077 -211750506 - MER7A DNA MER2_type 0 346 2 563 307 80 0 chr2 41507239 41507415 -211749168 + MIR SINE MIR 4 193 -69 237 222 48 0 chr2 41508016 41508079 -211748504 - MER45 DNA AcHobo 0 1581 1516 415 311 102 0 chr2 41509933 41510110 -211746473 - MIR SINE MIR -14 248 54 808 307 75 50 chr2 41510244 41510723 -211745860 + MLT1K LTR MaLR 13 503 -85 199 128 51 0 chr2 41511138 41511177 -211745406 - L2 LINE L2 0 3313 3273 222 235 39 0 chr2 41511257 41511308 -211745275 - L2 LINE L2 -325 2988 2936 642 242 0 0 chr2 41511779 41511903 -211744680 - MIR SINE MIR -79 183 60 444 331 45 113 chr2 41512551 41513106 -211743477 - L3 LINE CR1 -11 1566 1050 200 231 0 0 chr2 41513566 41513605 -211742978 + CT-rich Low_complexity Low_complexity 2 40 0 1070 176 4 64 chr2 41515697 41515930 -211740653 - MER20 DNA MER1_type 0 219 1 203 179 161 0 chr2 41516457 41516513 -211740070 - L2 LINE L2 -15 3298 3234 319 312 130 33 chr2 41517334 41517549 -211739034 - MIR SINE MIR -7 255 20 217 363 56 12 chr2 41517817 41517977 -211738606 + MIR SINE MIR 93 259 -3 203 77 0 26 chr2 41518790 41518829 -211737754 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 273 242 316 0 chr2 41518999 41519094 -211737489 + MIR SINE MIR 21 146 -62 284 260 27 0 chr2 41519403 41519476 -211737107 - MIR SINE MIR -27 235 161 710 309 31 0 chr2 41519618 41519809 -211736774 - MIR SINE MIR -21 241 45 204 312 225 0 chr2 41520405 41520543 -211736040 + MIR3 SINE MIR 10 178 -30 21 0 0 0 chr2 41521352 41521373 -211735210 + AT_rich Low_complexity Low_complexity 1 21 0 3671 150 24 43 chr2 41521642 41522383 -211734200 - L1MB2 LINE L1 -1 6170 5444 2753 217 78 24 chr2 41522529 41523274 -211733309 - MER21B LTR ERV1 -60 803 19 261 190 25 149 chr2 41523272 41523393 -211733190 - MER21B LTR ERV1 -757 106 1 * 2268 129 15 0 chr2 41523457 41523789 -211732794 + MER1B DNA MER1_type 1 337 0 203 258 34 34 chr2 41524039 41524128 -211732455 + (GGATG)n Simple_repeat Simple_repeat 1 89 0 1785 146 113 40 chr2 41524340 41524737 -211731846 + MSTA LTR MaLR 3 428 0 793 172 0 0 chr2 41525937 41526065 -211730518 + FLAM_C SINE Alu 5 132 -1 232 333 17 23 chr2 41530470 41530647 -211725936 - HAL1 LINE L1 -838 1669 1494 433 268 96 122 chr2 41530700 41531264 -211725319 - L1MDa LINE L1 -1160 1741 1228 24 53 0 0 chr2 41532245 41532283 -211724300 + AT_rich Low_complexity Low_complexity 1 38 0 282 367 48 20 chr2 41532428 41532575 -211724008 + L2 LINE L2 3122 3272 0 1449 271 89 34 chr2 41532716 41533212 -211723371 - MLT1E LTR MaLR 0 593 61 2003 138 59 8 chr2 41533212 41533568 -211723015 + THE1C LTR MaLR 2 375 0 1449 271 89 34 chr2 41533568 41533633 -211722950 - MLT1E LTR MaLR -532 61 1 402 270 49 54 chr2 41533634 41533819 -211722764 + MIR SINE MIR 78 261 -1 186 254 237 61 chr2 41534133 41534247 -211722336 + MIR3 SINE MIR 50 183 -25 388 335 87 14 chr2 41534802 41535089 -211721494 - MARNA DNA Mariner -133 453 146 394 115 64 0 chr2 41535147 41535225 -211721358 + L1PA13 LINE L1 6081 6163 0 327 250 76 0 chr2 41535286 41535378 -211721205 + MIR SINE MIR 53 151 -111 370 312 55 60 chr2 41535615 41535833 -211720750 - MIR SINE MIR -44 218 2 441 264 51 90 chr2 41535895 41536073 -211720510 + MER5B DNA MER1_type 1 171 -7 232 364 68 0 chr2 41536130 41536218 -211720365 + MIR SINE MIR 30 123 -85 182 250 120 65 chr2 41537270 41537378 -211719205 - MIR SINE MIR -132 130 17 5487 109 42 22 chr2 41538815 41539925 -211716658 - L1MA4A LINE L1 -7 6998 5861 735 183 15 0 chr2 41539929 41540060 -211716523 - FRAM SINE Alu -15 161 29 10609 169 43 28 chr2 41540062 41540212 -211716371 - L1MA4A LINE L1 -983 5865 5719 2017 138 6 13 chr2 41540212 41540524 -211716059 - AluSx SINE Alu -2 310 1 10609 169 43 28 chr2 41540524 41541447 -211715136 - L1MA4A LINE L1 -1129 5719 4811 1812 123 54 48 chr2 41541447 41541820 -211714763 + THE1C LTR MaLR 1 375 0 10609 169 43 28 chr2 41541820 41543237 -211713346 - L1MA4A LINE L1 -2037 4811 3337 8291 173 47 72 chr2 41543235 41545222 -211711361 - L1MA4A LINE L1 -4911 1938 2 * 1315 205 105 26 chr2 41545258 41545678 -211710905 - L1MDa LINE L1 -4516 2024 1572 272 296 96 30 chr2 41545817 41545952 -211710631 + MIR3 SINE MIR 21 164 -44 733 274 102 52 chr2 41547814 41548390 -211708193 - HAL1 LINE L1 -1367 1140 536 305 245 53 0 chr2 41548460 41548554 -211708029 - HAL1 LINE L1 -2408 99 1 367 260 0 60 chr2 41551043 41551143 -211705440 + L2 LINE L2 3220 3313 0 324 326 96 16 chr2 41551368 41551555 -211705028 - MIR SINE MIR -27 235 34 260 292 11 56 chr2 41551935 41552024 -211704559 - L2 LINE L2 -18 3254 3170 285 301 97 80 chr2 41552123 41552412 -211704171 + L2 LINE L2 2812 3105 -167 500 271 77 50 chr2 41555232 41555372 -211701211 - MLT1K LTR MaLR -252 336 186 1359 180 65 45 chr2 41555372 41555728 -211700855 - MLT1A1 LTR MaLR -2 363 1 500 271 77 50 chr2 41555728 41555808 -211700775 - MLT1K LTR MaLR -402 186 110 197 349 35 12 chr2 41556283 41556369 -211700214 - MIR SINE MIR -114 148 61 321 227 109 11 chr2 41556723 41556900 -211699683 - L1ME4a LINE L1 -236 5885 5691 866 294 99 51 chr2 41557180 41557673 -211698910 + MLT1H LTR MaLR 18 534 -15 264 399 6 39 chr2 41557900 41558078 -211698505 + MIR3 SINE MIR 1 172 -36 * 302 243 0 14 chr2 41558063 41558137 -211698446 - MIR SINE MIR 0 262 190 1750 254 91 22 chr2 41558686 41559516 -211697067 + L1ME3A LINE L1 5122 6011 -159 4270 206 28 13 chr2 41559696 41560789 -211695794 + L1P LINE L1 4254 5363 -783 391 273 22 14 chr2 41560803 41560942 -211695641 - L1ME3A LINE L1 -159 6011 5872 3799 112 105 7 chr2 41560942 41561656 -211694927 + L1PA16 LINE L1 5381 6164 -2 206 309 203 16 chr2 41562728 41562851 -211693732 - MIR3 SINE MIR -49 159 14 422 283 164 31 chr2 41563103 41563262 -211693321 - MER5A DNA MER1_type -1 188 9 538 248 32 11 chr2 41563267 41563428 -211693155 - MLT1A1 LTR MaLR -2 426 221 390 214 0 94 chr2 41563570 41563687 -211692896 - MLT1A1 LTR MaLR -259 106 1 7877 191 69 17 chr2 41563688 41565336 -211691247 - MLT1A1-int LTR MaLR -1 1734 1 1691 207 8 32 chr2 41565336 41565706 -211690877 - MLT1A1 LTR MaLR -2 363 1 1147 315 50 23 chr2 41565958 41566678 -211689905 - L2 LINE L2 -1 3312 2574 506 264 112 6 chr2 41567107 41567285 -211689298 - MER117 DNA MER1_type 0 197 1 645 267 81 38 chr2 41567333 41567569 -211689014 + MIR SINE MIR 5 250 -12 270 0 0 0 chr2 41567675 41567705 -211688878 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2066 122 0 0 chr2 41568092 41568378 -211688205 - AluSx SINE Alu 0 312 27 254 73 24 0 chr2 41568924 41568965 -211687618 + (CA)n Simple_repeat Simple_repeat 2 43 0 339 292 49 14 chr2 41569185 41569329 -211687254 - L1MEc LINE L1 -4850 1460 1312 1056 258 87 95 chr2 41569343 41570589 -211685994 - L1MEc LINE L1 -4862 1257 22 355 367 33 70 chr2 41570621 41570921 -211685662 - L2 LINE L2 -18 3254 2966 996 306 21 24 chr2 41571101 41571477 -211685106 - LTR16B LTR ERVL -13 451 77 186 65 97 0 chr2 41573711 41573773 -211682810 + (TA)n Simple_repeat Simple_repeat 1 68 0 195 184 0 0 chr2 41574399 41574437 -211682146 + (TA)n Simple_repeat Simple_repeat 1 38 0 226 208 17 110 chr2 41574474 41574647 -211681936 + L1 LINE L1 2242 2398 -3748 2038 129 0 0 chr2 41574778 41575058 -211681525 + AluSg SINE Alu 1 280 -30 334 289 69 37 chr2 41575065 41575283 -211681300 + L1MC4a LINE L1 2505 2729 -3417 297 0 0 0 chr2 41575289 41575322 -211681261 + (CA)n Simple_repeat Simple_repeat 2 34 0 294 284 121 26 chr2 41575519 41575983 -211680600 + L1MC4a LINE L1 4890 5397 -749 2374 83 0 16 chr2 41576006 41576320 -211680263 - AluY SINE Alu -2 309 1 939 226 21 24 chr2 41576340 41576382 -211680201 + L1MC4a LINE L1 5722 5763 -2045 920 216 98 77 chr2 41576382 41576770 -211679813 + MSTD LTR MaLR 1 396 0 939 226 21 24 chr2 41576770 41577014 -211679569 + L1MC4a LINE L1 5763 6007 -1801 325 358 66 0 chr2 41577699 41577836 -211678747 + MIR SINE MIR 47 192 -70 215 278 87 48 chr2 41579052 41579178 -211677405 + MIR SINE MIR 99 229 -33 412 208 28 62 chr2 41579369 41579513 -211677070 - MER112 DNA MER1_type -6 254 116 22 35 0 0 chr2 41579820 41579849 -211676734 + AT_rich Low_complexity Low_complexity 1 29 0 405 323 75 1 chr2 41580273 41580413 -211676170 - MIR3 SINE MIR -26 182 30 1067 124 0 0 chr2 41581142 41581287 -211675296 - AluSg/x SINE Alu -4 308 164 226 213 66 49 chr2 41582127 41582188 -211674395 - L2 LINE L2 -7 3265 3204 266 254 0 0 chr2 41582235 41582290 -211674293 - L2 LINE L2 -3 3269 3215 1667 107 8 0 chr2 41582313 41582557 -211674026 - MLT2A2 LTR ERVL -207 246 1 38390 92 15 3 chr2 41582557 41588020 -211668563 - HERVL-A2-A2 LTR ERVL 0 5654 124 1911 104 0 17 chr2 41588018 41588305 -211668278 + HERVL LTR ERVL 779 1060 -4594 * 872 92 0 0 chr2 41588302 41588433 -211668150 - HERVL-A2-A2 LTR ERVL -5523 131 1 * 2165 141 62 33 chr2 41588433 41588454 -211668129 - MLT2A2 LTR ERVL 0 554 535 2845 174 20 63 chr2 41588454 41589093 -211667490 - LTR9 LTR ERV1 0 612 1 2165 141 62 33 chr2 41589093 41589582 -211667001 - MLT2A2 LTR ERVL -19 535 3 924 197 67 0 chr2 41589667 41589860 -211666723 - MER58A DNA MER1_type -9 215 10 214 383 17 0 chr2 41590255 41590315 -211666268 - L2 LINE L2 -90 3182 3122 2057 128 7 7 chr2 41590706 41591004 -211665579 + AluSx SINE Alu 1 298 -14 313 222 81 0 chr2 41591730 41591829 -211664754 - L1ME4a LINE L1 -258 5863 5757 1008 260 29 55 chr2 41591918 41592431 -211664152 + MLT1G1 LTR MaLR 1 595 0 457 276 72 17 chr2 41592431 41592612 -211663971 - L1ME4a LINE L1 -451 5670 5480 262 218 46 23 chr2 41593355 41593442 -211663141 - L1ME4a LINE L1 -72 6049 5961 261 282 80 12 chr2 41593594 41593757 -211662826 - L1ME4a LINE L1 -373 5748 5575 525 232 74 20 chr2 41594404 41594555 -211662028 - MER5A DNA MER1_type -11 167 20 583 299 66 11 chr2 41594685 41594956 -211661627 + LTR16A LTR ERVL 157 442 -8 371 357 57 6 chr2 41595471 41595628 -211660955 + MIR SINE MIR 2 166 -96 739 193 114 50 chr2 41595694 41595896 -211660687 - MIR SINE MIR 0 262 48 879 148 60 16 chr2 41596067 41596250 -211660333 + L1MA8 LINE L1 5949 6139 -152 10117 45 3 0 chr2 41596258 41598278 -211658305 - L1PA4 LINE L1 -3 6152 4128 7074 33 3 0 chr2 41598278 41599177 -211657406 + L1PA4 LINE L1 3229 4130 -2016 690 131 39 8 chr2 41599171 41599301 -211657282 + L1MA8 LINE L1 6127 6260 -31 * 803 131 46 7 chr2 41599177 41599324 -211657259 + L1MA8 LINE L1 6127 6285 -6 183 167 0 0 chr2 41600359 41600401 -211656182 + (TTCA)n Simple_repeat Simple_repeat 4 45 0 407 308 95 6 chr2 41601187 41601356 -211655227 - L2 LINE L2 -426 2888 2705 415 300 103 30 chr2 41601560 41601793 -211654790 - MIR SINE MIR -11 251 2 187 195 65 65 chr2 41601848 41601925 -211654658 - MIR SINE MIR -63 145 69 984 159 7 4 chr2 41602638 41602916 -211653667 + (TA)n Simple_repeat Simple_repeat 1 279 0 301 171 32 8 chr2 41602977 41603100 -211653483 + (TA)n Simple_repeat Simple_repeat 1 126 0 288 234 96 0 chr2 41603102 41603196 -211653387 + MER103 DNA DNA 62 164 -2 2863 92 11 58 chr2 41604298 41604764 -211651819 - MLT2A1 LTR ERVL 0 444 1 293 297 51 25 chr2 41607031 41607149 -211649434 + MIR3 SINE MIR 83 203 -5 10452 37 2 0 chr2 41607181 41609223 -211647360 - L1PA3 LINE L1 0 6155 4112 26515 47 1 5 chr2 41609223 41612723 -211643860 + L1PA3 LINE L1 622 4107 -2039 180 349 108 0 chr2 41613998 41614081 -211642502 - MIR SINE MIR -66 142 51 347 332 40 5 chr2 41615416 41615615 -211640968 - L1ME3 LINE L1 -336 5826 5621 290 241 26 17 chr2 41615768 41615884 -211640699 - L1ME3 LINE L1 -930 5429 5313 189 261 130 0 chr2 41615906 41615975 -211640608 - MIR SINE MIR -21 241 164 342 283 29 35 chr2 41616168 41616341 -211640242 - L1ME3 LINE L1 -2453 3693 3522 279 259 0 0 chr2 41616679 41616764 -211639819 + GA-rich Low_complexity Low_complexity 4 88 0 23 33 0 0 chr2 41616986 41617016 -211639567 + AT_rich Low_complexity Low_complexity 1 30 0 324 285 73 20 chr2 41617059 41617210 -211639373 - L1MC3 LINE L1 -1860 5925 5767 482 282 43 43 chr2 41617379 41617542 -211639041 - L2 LINE L2 -302 3011 2849 860 45 0 9 chr2 41617542 41617654 -211638929 + L1MA8 LINE L1 5620 5730 -570 1530 145 24 24 chr2 41617658 41617955 -211638628 + L1MA8 LINE L1 5813 6109 -182 474 216 0 0 chr2 41617960 41618048 -211638535 + Tigger3(Golem) DNA MER2_type 11 98 -2931 4045 129 60 7 chr2 41618051 41618795 -211637788 + Tigger3(Golem) DNA MER2_type 2246 3029 0 617 193 84 0 chr2 41618795 41618961 -211637622 + L1MA8 LINE L1 6108 6287 -4 354 204 258 0 chr2 41619055 41619187 -211637396 - L2 LINE L2 -568 2746 2581 285 304 88 53 chr2 41619185 41619356 -211637227 - MIR SINE MIR -60 202 26 * 224 333 0 0 chr2 41619930 41620005 -211636578 - MIR3 SINE MIR -25 183 109 326 289 96 15 chr2 41620108 41620243 -211636340 + MIR SINE MIR 63 208 -54 461 307 13 7 chr2 41620728 41620878 -211635705 + MIR SINE MIR 68 218 -44 2569 180 39 10 chr2 41620878 41621394 -211635189 + MER44D DNA MER2_type 20 605 0 23 0 0 0 chr2 41622550 41622573 -211634010 + AT_rich Low_complexity Low_complexity 1 23 0 446 286 136 23 chr2 41624547 41624767 -211631816 - MIR SINE MIR -15 247 3 2520 49 10 3 chr2 41625428 41625736 -211630847 - AluY SINE Alu 0 311 2 402 241 98 0 chr2 41627381 41627493 -211629090 - L2 LINE L2 -4 3309 3187 21 36 0 0 chr2 41627833 41627861 -211628722 + AT_rich Low_complexity Low_complexity 1 28 0 1974 126 3 7 chr2 41629297 41629598 -211626985 - AluSg SINE Alu -10 300 1 194 119 48 0 chr2 41629685 41629727 -211626856 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 1445 158 217 17 chr2 41629837 41630192 -211626391 - MSTA LTR MaLR 0 428 3 1563 228 17 0 chr2 41630648 41630937 -211625646 - AluJb SINE Alu -18 294 1 1102 186 38 0 chr2 41631172 41631382 -211625201 - MER20 DNA MER1_type 0 219 2 476 270 69 54 chr2 41631731 41632120 -211624463 + L1MC4a LINE L1 5608 6002 -119 753 179 152 33 chr2 41632284 41632468 -211624115 + MER20 DNA MER1_type 4 209 -10 183 42 0 0 chr2 41632655 41632679 -211623904 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 40165 38 23 3 chr2 41632679 41638698 -211617885 - L1PA2 LINE L1 -8 6147 1 260 230 58 58 chr2 41638966 41639053 -211617530 - MLT1L LTR MaLR -362 253 167 4598 141 29 17 chr2 41639131 41639590 -211616993 + L1PA16 LINE L1 5313 5789 -377 2331 71 0 3 chr2 41639590 41639900 -211616683 + AluY SINE Alu 1 309 0 4598 141 29 17 chr2 41639900 41640276 -211616307 + L1PA16 LINE L1 5789 6159 -7 377 232 42 68 chr2 41642093 41642283 -211614300 + L1MEc LINE L1 2187 2371 -4025 1622 173 0 11 chr2 41642454 41642725 -211613858 - AluJb SINE Alu -39 273 6 2504 114 5 16 chr2 41644248 41644616 -211611967 + THE1B LTR MaLR 1 364 0 10723 114 15 6 chr2 41644616 41646183 -211610400 + THE1B-int LTR MaLR 1 1580 0 2023 124 6 32 chr2 41646183 41646530 -211610053 + THE1B LTR MaLR 1 338 -26 4133 169 48 22 chr2 41647201 41647974 -211608609 - MER54B LTR ERVL 0 793 1 754 139 0 0 chr2 41648352 41648474 -211608109 - L1P LINE L1 -4924 1222 1101 15695 51 11 2 chr2 41648474 41652030 -211604553 + L1PA5 LINE L1 2559 6149 -5 330 211 60 15 chr2 41652030 41652133 -211604450 + MIR SINE MIR 112 219 -43 396 278 158 8 chr2 41652377 41652510 -211604073 - L2 LINE L2 -2 3270 3118 385 241 23 0 chr2 41653468 41653555 -211603028 + L2 LINE L2 3221 3309 -4 4909 160 54 14 chr2 41654164 41655372 -211601211 + L1MA6 LINE L1 5058 6300 0 461 243 49 14 chr2 41655433 41655577 -211601006 - MIR SINE MIR -14 248 100 1107 213 97 37 chr2 41656003 41656271 -211600312 + AluJb SINE Alu 6 289 -23 193 263 32 63 chr2 41657577 41657672 -211598911 - L2 LINE L2 -8 3264 3173 395 311 76 44 chr2 41657726 41658041 -211598542 - LTR16C LTR ERVL -93 398 74 228 200 53 53 chr2 41658159 41658234 -211598349 - L1ME4a LINE L1 -82 6039 5965 273 276 17 33 chr2 41658372 41658541 -211598042 - LTR16A LTR ERVL -284 166 1 2165 142 7 0 chr2 41659602 41659971 -211596612 - AluSx SINE Alu 0 371 1 392 269 54 54 chr2 41660277 41660624 -211595959 + MLT1J2 LTR MaLR 26 369 -40 528 326 124 0 chr2 41660677 41660895 -211595688 + MIR SINE MIR 15 259 -3 228 200 91 0 chr2 41661820 41661875 -211594708 + L2 LINE L2 3213 3272 0 223 238 0 0 chr2 41663430 41663495 -211593088 + (TG)n Simple_repeat Simple_repeat 1 65 0 21 57 0 0 chr2 41663971 41664006 -211592577 + AT_rich Low_complexity Low_complexity 1 35 0 306 0 0 0 chr2 41664593 41664627 -211591956 + (T)n Simple_repeat Simple_repeat 1 34 0 778 176 0 50 chr2 41664904 41665063 -211591520 - L1PB4 LINE L1 -2 6154 6004 215 136 45 0 chr2 41666388 41666432 -211590151 + CT-rich Low_complexity Low_complexity 4 49 0 2024 102 4 4 chr2 41666432 41666706 -211589877 - AluSc SINE Alu -35 274 1 321 183 17 0 chr2 41667114 41667174 -211589409 + MLT1D LTR MaLR 1 61 -444 298 275 11 0 chr2 41667171 41667262 -211589321 + MLT1J2 LTR MaLR 535 626 0 * 593 259 113 15 chr2 41668015 41668281 -211588302 + LTR43 LTR ERV1 179 470 -132 2398 88 0 0 chr2 41668301 41668607 -211587976 - AluSc SINE Alu -3 306 1 210 222 0 22 chr2 41669326 41669371 -211587212 + G-rich Low_complexity Low_complexity 4 47 0 2145 120 3 28 chr2 41669427 41669744 -211586839 - AluSp SINE Alu -4 309 1 370 291 259 46 chr2 41669780 41670348 -211586235 + L2 LINE L2 1710 2398 -916 200 220 0 20 chr2 41670561 41670611 -211585972 + T-rich Low_complexity Low_complexity 2 50 0 643 230 34 7 chr2 41672627 41672775 -211583808 + MIR SINE MIR 90 241 -21 1069 279 84 9 chr2 41672857 41673204 -211583379 - L2 LINE L2 -710 2604 2232 272 370 74 59 chr2 41674398 41674668 -211581915 + L2 LINE L2 2998 3271 -1 481 324 62 6 chr2 41674837 41675013 -211581570 + MER5A DNA MER1_type 3 188 -1 314 240 0 62 chr2 41675431 41675527 -211581056 + L1MC4 LINE L1 6614 6703 -1339 303 322 0 0 chr2 41675447 41675537 -211581046 - L1MC4 LINE L1 -1339 6703 6614 * 224 333 103 16 chr2 41675814 41675940 -211580643 + MIR SINE MIR 72 208 -54 690 329 20 15 chr2 41675980 41676381 -211580202 + L1MEc LINE L1 40 442 -5954 497 236 56 6 chr2 41676545 41676723 -211579860 + L1MEc LINE L1 726 912 -5484 966 204 144 51 chr2 41677420 41677754 -211578829 + MLT1A1 LTR MaLR 1 365 0 2130 154 67 9 chr2 41678006 41678454 -211578129 + L1MB2 LINE L1 5696 6169 -2 1954 93 0 30 chr2 41678538 41678806 -211577777 + AluSq SINE Alu 1 260 -53 341 336 16 16 chr2 41678820 41678942 -211577641 - MIR3 SINE MIR -73 135 14 21 0 0 0 chr2 41679052 41679073 -211577510 + AT_rich Low_complexity Low_complexity 1 21 0 3299 191 19 63 chr2 41679307 41680181 -211576402 - L1MA9 LINE L1 -145 6167 5332 208 336 131 33 chr2 41680246 41680368 -211576215 - MIR3 SINE MIR -71 137 4 7242 47 5 1 chr2 41680812 41681817 -211574766 + L1PA5 LINE L1 5143 6151 -3 195 129 0 0 chr2 41682325 41682356 -211574227 + (TG)n Simple_repeat Simple_repeat 1 31 0 630 302 125 0 chr2 41682528 41682760 -211573823 - MIR SINE MIR 0 262 2 3397 116 0 13 chr2 41683102 41683638 -211572945 + L1PA13 LINE L1 5634 6162 -1 743 254 51 11 chr2 41683810 41683987 -211572596 + MER5A DNA MER1_type 5 188 -1 1570 177 69 100 chr2 41684306 41684786 -211571797 - MLT1C LTR MaLR -2 465 1 45 19 0 0 chr2 41685084 41685136 -211571447 + AT_rich Low_complexity Low_complexity 1 52 0 202 275 43 14 chr2 41685162 41685231 -211571352 + MIR SINE MIR 109 179 -83 1386 137 50 0 chr2 41685615 41685834 -211570749 - MER30 DNA MER1_type 0 230 1 503 269 119 40 chr2 41686335 41686536 -211570047 + MIR SINE MIR 20 236 -26 327 25 0 0 chr2 41687890 41687930 -211568653 + (TG)n Simple_repeat Simple_repeat 1 40 0 22 35 0 0 chr2 41688652 41688681 -211567902 + AT_rich Low_complexity Low_complexity 1 29 0 205 29 59 0 chr2 41688708 41688742 -211567841 + (TAA)n Simple_repeat Simple_repeat 3 38 0 1875 127 16 95 chr2 41689971 41690350 -211566233 - L1PA16 LINE L1 -4 6162 5814 20380 187 15 17 chr2 41690355 41690451 -211566132 - L1PA13 LINE L1 -19 7582 7487 2628 93 27 5 chr2 41690451 41690818 -211565765 - THE1C LTR MaLR 0 375 1 20380 187 15 17 chr2 41690818 41695045 -211561538 - L1PA13 LINE L1 -114 7487 1923 2117 121 0 24 chr2 41695045 41695342 -211561241 + AluSq SINE Alu 1 290 -23 20380 187 15 17 chr2 41695342 41697259 -211559324 - L1PA13 LINE L1 -5678 1923 2 3501 173 48 9 chr2 41697260 41698563 -211558020 - L1PA16 LINE L1 -332 5834 4476 288 70 0 0 chr2 41698690 41698733 -211557850 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 2062 53 19 0 chr2 41698740 41699006 -211557577 - L1PA7 LINE L1 -3 6151 5881 11118 92 9 1 chr2 41699036 41700811 -211555772 - L1P3 LINE L1 -645 5509 3721 1407 203 125 24 chr2 41700812 41701235 -211555348 - L1 LINE L1 -1662 4484 4019 193 296 136 34 chr2 41701264 41701352 -211555231 - MIR SINE MIR -123 139 43 297 244 130 93 chr2 41701529 41701775 -211554808 - MLT1K LTR MaLR -51 537 283 275 281 55 31 chr2 41702163 41702291 -211554292 + MIR3 SINE MIR 24 154 -54 22 35 0 0 chr2 41702432 41702461 -211554122 + AT_rich Low_complexity Low_complexity 1 29 0 230 271 41 82 chr2 41703929 41704051 -211552532 - MIR SINE MIR -50 212 96 2002 139 7 0 chr2 41704782 41705077 -211551506 + AluSx SINE Alu 1 297 -15 21266 158 35 14 chr2 41705095 41709864 -211546719 - L1MA3 LINE L1 -400 7324 2348 1615 201 10 0 chr2 41709864 41710167 -211546416 - AluJb SINE Alu -2 310 5 21266 158 35 14 chr2 41710167 41712553 -211544030 - L1MA3 LINE L1 -5376 2348 14 787 155 92 6 chr2 41713449 41713623 -211542960 - MER53 DNA DNA 0 189 1 380 256 12 113 chr2 41713624 41713784 -211542799 - MER5B DNA MER1_type -34 144 1 231 153 0 51 chr2 41714763 41714822 -211541761 + L1MA3 LINE L1 6250 6305 0 293 287 96 38 chr2 41715281 41715438 -211541145 + MIR SINE MIR 8 173 -89 207 0 0 0 chr2 41715440 41715463 -211541120 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2202 107 0 0 chr2 41715465 41715754 -211540829 - AluSg SINE Alu -21 289 1 191 59 0 29 chr2 41715761 41715795 -211540788 + (TTTTTA)n Simple_repeat Simple_repeat 4 36 0 1133 260 24 0 chr2 41716192 41716446 -211540137 - MIR SINE MIR -1 261 2 2073 107 23 7 chr2 41716598 41716906 -211539677 + L1PA13 LINE L1 5837 6149 -14 680 313 45 4 chr2 41719054 41719300 -211537283 + MIR SINE MIR 1 256 -6 1917 169 49 53 chr2 41719376 41719844 -211536739 - MER31B LTR ERV1 0 466 1 582 295 33 40 chr2 41719886 41720107 -211536476 - MIR SINE MIR -7 255 38 293 384 0 0 chr2 41721127 41721226 -211535357 + L2 LINE L2 3174 3272 0 21 57 0 0 chr2 41722347 41722382 -211534201 + AT_rich Low_complexity Low_complexity 1 35 0 709 198 42 68 chr2 41725845 41726037 -211530546 - MER5A DNA MER1_type 0 189 3 648 118 0 0 chr2 41730335 41730428 -211526155 + AluS SINE Alu 1 93 -219 960 18 0 0 chr2 41731274 41731383 -211525200 + AluYa5/8 SINE Alu 197 305 -5 26 0 0 0 chr2 41731948 41731974 -211524609 + AT_rich Low_complexity Low_complexity 1 26 0 326 268 0 31 chr2 41737131 41737228 -211519355 + L2 LINE L2 3189 3282 -31 191 125 25 0 chr2 41738965 41739005 -211517578 + A-rich Low_complexity Low_complexity 2 42 0 214 143 20 20 chr2 41739270 41739319 -211517264 + (TA)n Simple_repeat Simple_repeat 2 50 0 193 353 88 12 chr2 41740002 41740172 -211516411 + MER5A DNA MER1_type 7 189 0 2390 35 3 0 chr2 41740395 41740684 -211515899 - L1PA2 LINE L1 -4 6151 5862 588 252 117 33 chr2 41740957 41741171 -211515412 + MIR SINE MIR 4 235 -27 2072 110 0 63 chr2 41741341 41741659 -211514924 + AluSx SINE Alu 1 298 -14 290 342 106 15 chr2 41742137 41742336 -211514247 - MIR SINE MIR -24 238 22 261 0 0 0 chr2 41742686 41742715 -211513868 + (T)n Simple_repeat Simple_repeat 1 29 0 315 276 200 0 chr2 41744502 41744607 -211511976 + MIR3 SINE MIR 60 185 -23 508 301 16 48 chr2 41744972 41745056 -211511527 + MER5A DNA MER1_type 8 93 -96 1454 80 0 15 chr2 41745056 41745256 -211511327 - MER107 DNA MER1_type 0 197 1 508 301 16 48 chr2 41745256 41745357 -211511226 + MER5A DNA MER1_type 93 187 -2 319 174 163 0 chr2 41745707 41745799 -211510784 + MIR SINE MIR 156 262 0 255 170 0 0 chr2 41746285 41746332 -211510251 + (CA)n Simple_repeat Simple_repeat 1 47 0 365 284 37 30 chr2 41746616 41746750 -211509833 - MER5B DNA MER1_type -13 165 31 243 257 100 14 chr2 41748687 41748827 -211507756 + L1MB8 LINE L1 5588 5739 -382 183 80 0 0 chr2 41749826 41749851 -211506732 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 260 343 28 9 chr2 41750912 41751020 -211505563 + L2 LINE L2 3162 3271 -1 823 232 20 16 chr2 41752995 41753245 -211503338 + L1MB8 LINE L1 5926 6176 -2 1900 149 3 17 chr2 41753313 41753614 -211502969 - AluJo SINE Alu -15 297 1 570 270 83 61 chr2 41755120 41755350 -211501233 - MIR SINE MIR -8 254 20 234 0 0 0 chr2 41755937 41755963 -211500620 + (T)n Simple_repeat Simple_repeat 1 26 0 268 304 59 52 chr2 41756300 41756435 -211500148 + MIR SINE MIR 13 148 -114 283 304 170 18 chr2 41756475 41756587 -211499996 + MER91C DNA MER1_type 1 129 -11 2378 92 0 0 chr2 41758154 41758470 -211498113 - AluSx SINE Alu 0 316 1 1089 328 155 32 chr2 41758931 41759504 -211497079 - L2 LINE L2 -126 3187 2686 2027 130 0 37 chr2 41759504 41759826 -211496757 + AluSx SINE Alu 1 310 -2 1089 328 155 32 chr2 41759826 41760219 -211496364 - L2 LINE L2 -627 2686 2100 559 270 31 25 chr2 41762114 41762277 -211494306 - MIR SINE MIR -14 248 85 429 272 123 25 chr2 41762641 41762803 -211493780 - MER5A DNA MER1_type -11 178 1 324 349 124 48 chr2 41764347 41764553 -211492030 + L2 LINE L2 2891 3080 -192 591 217 133 0 chr2 41764553 41764719 -211491864 + MER5A DNA MER1_type 1 188 -1 324 349 124 48 chr2 41764719 41764867 -211491716 + L2 LINE L2 3080 3272 0 1903 167 20 48 chr2 41765751 41766147 -211490436 + MLT1B LTR MaLR 1 385 -5 224 243 0 29 chr2 41766223 41766293 -211490290 + T-rich Low_complexity Low_complexity 5 72 0 255 31 0 0 chr2 41767013 41767045 -211489538 + (TG)n Simple_repeat Simple_repeat 1 32 0 277 273 49 45 chr2 41767955 41768100 -211488483 + MIR SINE MIR 28 185 -63 571 304 25 25 chr2 41768322 41768526 -211488057 - MIR SINE MIR -20 242 39 1216 233 50 52 chr2 41768889 41769365 -211487218 - L1MA9 LINE L1 -38 6274 5800 216 295 0 0 chr2 41769800 41769861 -211486722 + (TG)n Simple_repeat Simple_repeat 1 61 0 1458 115 188 0 chr2 41770518 41770779 -211485804 - MER1A DNA MER1_type 0 529 220 333 270 30 20 chr2 41771968 41772068 -211484515 - MIR SINE MIR -75 187 87 203 243 129 0 chr2 41772725 41772795 -211483788 + MIR SINE MIR 72 150 -112 704 286 181 48 chr2 41773307 41773705 -211482878 - L2 LINE L2 0 3313 2863 189 223 159 102 chr2 41774050 41774207 -211482376 + MIR3 SINE MIR 41 206 -2 212 86 29 0 chr2 41775334 41775369 -211481214 + (TG)n Simple_repeat Simple_repeat 2 37 0 302 245 0 92 chr2 41775465 41775563 -211481020 - L2 LINE L2 0 3272 3184 1926 148 0 36 chr2 41776490 41776794 -211479789 - AluSx SINE Alu -19 293 1 824 179 12 24 chr2 41776894 41777062 -211479521 + FAM SINE Alu 1 166 -9 229 305 12 49 chr2 41777391 41777473 -211479110 - MIR SINE MIR -145 117 39 391 288 57 48 chr2 41778108 41778302 -211478281 + MIR SINE MIR 11 210 -52 2311 81 0 72 chr2 41778371 41778705 -211477878 - AluY SINE Alu -1 310 1 1519 148 17 4 chr2 41778746 41778983 -211477600 - AluJo SINE Alu -12 300 61 2329 70 0 0 chr2 41779201 41779507 -211477076 - AluY SINE Alu 0 306 1 437 341 8 0 chr2 41780303 41780432 -211476151 - MIR3 SINE MIR -21 187 58 335 325 13 13 chr2 41780820 41780977 -211475606 + (TG)n Simple_repeat Simple_repeat 2 158 0 254 281 35 61 chr2 41781019 41781133 -211475450 + MIR SINE MIR 33 143 -119 258 251 52 103 chr2 41781335 41781545 -211475038 - MIR SINE MIR -75 187 3 529 326 48 13 chr2 41783190 41783417 -211473166 + L2 LINE L2 3041 3275 -38 821 230 69 43 chr2 41791189 41791580 -211465003 - MER113 DNA MER1_type? -64 457 57 22 56 0 0 chr2 41791920 41791956 -211464627 + AT_rich Low_complexity Low_complexity 1 36 0 299 254 0 15 chr2 41792014 41792081 -211464502 + L2 LINE L2 3242 3307 -6 210 236 46 196 chr2 41792191 41792517 -211464066 - L2 LINE L2 -95 3177 2901 1741 185 0 13 chr2 41793737 41794039 -211462544 + AluJb SINE Alu 1 298 -14 187 214 71 0 chr2 41794933 41794975 -211461608 + MIR SINE MIR 118 162 -100 437 307 0 0 chr2 41795160 41795274 -211461309 + MIR SINE MIR 33 146 -62 2341 76 0 3 chr2 41796739 41797027 -211459556 + AluSc SINE Alu 1 287 -22 387 364 11 30 chr2 41797210 41797474 -211459109 + L3 LINE CR1 655 913 -664 33 66 0 0 chr2 41798271 41798332 -211458251 + AT_rich Low_complexity Low_complexity 1 61 0 226 274 0 0 chr2 41799559 41799610 -211456973 + (TG)n Simple_repeat Simple_repeat 2 52 0 238 262 16 0 chr2 41802976 41803037 -211453546 + L1ME4a LINE L1 5987 6048 -73 27 73 0 0 chr2 41803059 41803114 -211453469 + AT_rich Low_complexity Low_complexity 1 55 0 2396 97 0 0 chr2 41805030 41805338 -211451245 - AluSq SINE Alu -5 308 1 350 273 75 44 chr2 41807138 41807297 -211449286 - MIR SINE MIR -37 171 52 434 191 229 46 chr2 41807615 41807746 -211448837 + MER5A DNA MER1_type 33 187 -2 438 299 45 19 chr2 41807821 41807958 -211448625 + MER5B DNA MER1_type 6 149 -29 1484 161 3 74 chr2 41807958 41808257 -211448326 + AluJo SINE Alu 7 284 -28 438 299 45 19 chr2 41808257 41808273 -211448310 + MER5B DNA MER1_type 149 163 -15 229 225 0 0 chr2 41808289 41808329 -211448254 - MER5B DNA MER1_type -127 51 12 22 56 0 0 chr2 41808345 41808381 -211448202 + AT_rich Low_complexity Low_complexity 1 36 0 252 122 0 0 chr2 41808971 41809012 -211447571 + (A)n Simple_repeat Simple_repeat 1 41 0 4360 148 43 28 chr2 41809012 41809867 -211446716 + L1MB7 LINE L1 5317 6184 0 315 373 25 19 chr2 41810748 41810909 -211445674 + MIR SINE MIR 18 179 -83 1977 113 29 4 chr2 41813417 41813692 -211442891 - AluSx SINE Alu -30 282 1 315 230 198 0 chr2 41813694 41813820 -211442763 - L1ME4a LINE L1 -3 6118 5968 381 325 99 0 chr2 41814374 41814525 -211442058 - MIR3 SINE MIR -41 167 2 192 40 0 0 chr2 41815004 41815029 -211441554 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr2 41815838 41815861 -211440722 + AT_rich Low_complexity Low_complexity 1 23 0 186 194 15 90 chr2 41817074 41817141 -211439442 + L2 LINE L2 3201 3262 -10 245 282 14 28 chr2 41817374 41817445 -211439138 - L2 LINE L2 0 3272 3203 342 0 0 0 chr2 41818548 41818586 -211437997 + (TG)n Simple_repeat Simple_repeat 1 38 0 657 63 0 0 chr2 41824252 41824347 -211432236 + (TA)n Simple_repeat Simple_repeat 1 95 0 1867 146 7 40 chr2 41827793 41828094 -211428489 - AluJb SINE Alu -21 291 1 959 189 77 4 chr2 41828781 41829014 -211427569 - MER33 DNA MER1_type -74 250 1 518 125 83 17 chr2 41829221 41829341 -211427242 + L1MA8 LINE L1 6164 6291 0 622 26 0 0 chr2 41829492 41829568 -211427015 - L1PA13 LINE L1 -341 5827 5752 2214 100 16 0 chr2 41829568 41829888 -211426695 + L1PA13 LINE L1 5835 6159 -4 1597 234 115 16 chr2 41830720 41831284 -211425299 + HsTC2 DNA Tc2 1274 1893 -5 21 0 0 0 chr2 41831595 41831616 -211424967 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 41831663 41831684 -211424899 + AT_rich Low_complexity Low_complexity 1 21 0 206 208 62 0 chr2 41832962 41833010 -211423573 - MIR3 SINE MIR -7 201 151 910 290 95 39 chr2 41833046 41833743 -211422840 - L2 LINE L2 -8 3305 2579 1009 226 22 40 chr2 41833744 41834019 -211422564 - L2 LINE L2 -1805 1509 1240 245 178 0 0 chr2 41834054 41834099 -211422484 - MER117 DNA MER1_type -132 65 21 276 364 58 55 chr2 41835386 41835749 -211420834 - L2 LINE L2 -955 2359 1996 2008 141 3 0 chr2 41836362 41836661 -211419922 - AluSc SINE Alu -9 300 1 2009 106 33 23 chr2 41838514 41838816 -211417767 - AluSg SINE Alu -5 305 1 191 205 0 0 chr2 41839206 41839245 -211417338 + MIR SINE MIR 224 262 0 1307 208 24 51 chr2 41839260 41839434 -211417149 - AluJo SINE Alu -26 286 122 2890 16 0 0 chr2 41839434 41839750 -211416833 + AluYb8 SINE Alu 1 316 -2 1307 208 24 51 chr2 41839750 41839869 -211416714 - AluJo SINE Alu -190 122 1 6184 93 14 6 chr2 41840096 41841501 -211415082 - L1PA8 LINE L1 0 6172 4719 292 93 0 0 chr2 41842613 41842656 -211413927 + MADE1 DNA Mariner 38 80 0 252 0 0 0 chr2 41843954 41843982 -211412601 + (T)n Simple_repeat Simple_repeat 1 28 0 186 257 20 10 chr2 41844241 41844342 -211412241 + GA-rich Low_complexity Low_complexity 1 102 0 13282 84 9 0 chr2 41844965 41847604 -211408979 + L1PA7 LINE L1 3501 6152 -2 223 285 32 89 chr2 41848616 41848774 -211407809 - MER5B DNA MER1_type -3 175 27 741 103 34 0 chr2 41848854 41848971 -211407612 + L1P LINE L1 5228 5348 -798 413 335 38 32 chr2 41849306 41849491 -211407092 + MIR SINE MIR 77 262 0 2066 80 53 3 chr2 41851482 41851783 -211404800 + L1PA13 LINE L1 5829 6144 -19 22 0 0 0 chr2 41851784 41851806 -211404777 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 41852141 41852163 -211404420 + AT_rich Low_complexity Low_complexity 1 22 0 383 308 47 30 chr2 41854049 41854218 -211402365 - MIR3 SINE MIR -32 176 5 21 0 0 0 chr2 41854707 41854728 -211401855 + AT_rich Low_complexity Low_complexity 1 21 0 40598 36 22 2 chr2 41856679 41862706 -211393877 - L1PA2 LINE L1 0 6155 5 479 261 83 22 chr2 41863492 41863672 -211392911 - MIR3 SINE MIR -14 194 4 349 133 0 0 chr2 41863717 41863777 -211392806 + Alu SINE Alu 242 301 -1 229 232 0 36 chr2 41864742 41864798 -211391785 - L2 LINE L2 -4 3309 3256 899 192 0 6 chr2 41864809 41864965 -211391618 + FRAM SINE Alu 1 154 -22 2932 165 55 2 chr2 41865020 41865564 -211391019 + L1PA16 LINE L1 5585 6157 -9 231 36 0 0 chr2 41866211 41866239 -211390344 + (TG)n Simple_repeat Simple_repeat 1 28 0 1524 180 21 24 chr2 41867295 41867584 -211388999 + AluJb SINE Alu 18 305 -7 308 219 62 10 chr2 41868359 41868455 -211388128 - MIR SINE MIR -2 260 160 198 0 0 0 chr2 41868644 41868666 -211387917 + (A)n Simple_repeat Simple_repeat 1 22 0 461 263 60 8 chr2 41869964 41870097 -211386486 - MIR SINE MIR -118 144 5 198 0 0 0 chr2 41871513 41871535 -211385048 + (TG)n Simple_repeat Simple_repeat 1 22 0 256 250 61 91 chr2 41871812 41871944 -211384639 - MIR3 SINE MIR -23 185 58 1680 178 36 36 chr2 41872335 41872700 -211383883 + MLT1A1 LTR MaLR 1 365 0 268 304 191 9 chr2 41874289 41874404 -211382179 + MIR SINE MIR 16 151 -111 1936 123 0 31 chr2 41876427 41876720 -211379863 - AluSx SINE Alu -28 284 1 300 318 53 41 chr2 41876778 41876948 -211379635 + L1MC4 LINE L1 6536 6707 -1335 236 300 0 0 chr2 41876997 41877087 -211379496 - L1MC4 LINE L1 -1339 6703 6614 230 104 0 42 chr2 41877096 41877144 -211379439 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 332 253 0 32 chr2 41877144 41877239 -211379344 + L1MC4 LINE L1 6612 6703 -1339 301 326 0 0 chr2 41877216 41877305 -211379278 - L1MC4 LINE L1 -1340 6702 6614 * 401 212 0 10 chr2 41877318 41877417 -211379166 + (TA)n Simple_repeat Simple_repeat 1 98 0 2656 131 21 44 chr2 41877417 41877622 -211378961 + L1MA4 LINE L1 5782 5990 -310 2407 77 3 19 chr2 41877622 41877935 -211378648 + AluSq SINE Alu 1 308 -5 2656 131 21 44 chr2 41877935 41878255 -211378328 + L1MA4 LINE L1 5990 6295 -5 223 281 10 21 chr2 41879037 41879133 -211377450 + CT-rich Low_complexity Low_complexity 4 98 0 293 338 77 8 chr2 41879583 41879750 -211376833 + MIR SINE MIR 19 193 -61 360 64 0 0 chr2 41881088 41881135 -211375448 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 22 0 0 0 chr2 41881297 41881319 -211375264 + AT_rich Low_complexity Low_complexity 1 22 0 2033 136 0 7 chr2 41882636 41882945 -211373638 + AluSx SINE Alu 1 307 -5 262 364 68 8 chr2 41883210 41883328 -211373255 - L3 LINE CR1 -16 1561 1437 745 205 90 13 chr2 41883557 41883713 -211372870 - FRAM SINE Alu -11 165 1 225 333 16 78 chr2 41885993 41886045 -211370538 + L2 LINE L2 3139 3193 -79 2367 88 0 0 chr2 41886045 41886339 -211370244 - AluSc SINE Alu -15 294 1 225 333 16 78 chr2 41886339 41886415 -211370168 + L2 LINE L2 3193 3259 -13 251 218 18 0 chr2 41886696 41886751 -211369832 - L2 LINE L2 0 3313 3258 468 302 99 24 chr2 41887179 41887391 -211369192 + MIR SINE MIR 8 235 -27 216 252 96 43 chr2 41887399 41887415 -211369168 - MIR SINE MIR -33 229 215 7574 25 6 0 chr2 41887415 41888934 -211367649 + L1PA4 LINE L1 4625 6152 -3 216 252 96 43 chr2 41888934 41889032 -211367551 - MIR SINE MIR -47 215 109 320 292 25 17 chr2 41889039 41889159 -211367424 + MLT1I LTR MaLR 52 172 -237 450 235 0 10 chr2 41889253 41889355 -211367228 + MLT1I LTR MaLR 303 403 -6 298 264 186 0 chr2 41942954 41943083 -211313500 + L2 LINE L2 3161 3313 0 222 236 95 95 chr2 41943109 41943257 -211313326 - MIR SINE MIR -12 250 103 342 311 25 17 chr2 41943712 41943831 -211312752 + MER5A DNA MER1_type 70 189 0 603 28 0 0 chr2 41945246 41945317 -211311266 - L1PA3 LINE L1 -3 6152 6082 2364 196 34 24 chr2 41945737 41946237 -211310346 - MLT1D LTR MaLR 0 505 1 1004 240 80 90 chr2 41946389 41947151 -211309432 + L2 LINE L2 2555 3313 0 190 250 200 0 chr2 41947149 41947229 -211309354 - L2 LINE L2 -8 3264 3169 * 1783 176 3 6 chr2 41947302 41947615 -211308968 - AluJo SINE Alu 0 312 1 2375 91 0 0 chr2 41948390 41948688 -211307895 - AluSg SINE Alu -12 298 1 1048 98 0 0 chr2 41948707 41948840 -211307743 - AluSp SINE Alu -180 133 1 261 275 7 113 chr2 41951057 41951199 -211305384 + MIR SINE MIR 86 212 -50 337 263 13 155 chr2 41952615 41952707 -211303876 + MIR SINE MIR 63 104 -158 2129 103 7 3 chr2 41952707 41952998 -211303585 + AluSx SINE Alu 2 293 -19 337 263 13 155 chr2 41952998 41953137 -211303446 + MIR SINE MIR 104 261 -1 303 252 36 54 chr2 41953169 41953280 -211303303 - L1MC4 LINE L1 -1321 6721 6613 520 253 137 44 chr2 41953294 41953476 -211303107 - MIR SINE MIR -24 238 40 2215 93 0 0 chr2 41953636 41953963 -211302620 + AluSc SINE Alu 1 327 0 24 77 0 0 chr2 41954279 41954331 -211302252 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr2 41955699 41955721 -211300862 + (A)n Simple_repeat Simple_repeat 1 22 0 413 373 101 29 chr2 41956004 41956320 -211300263 - L2 LINE L2 -18 3254 2916 366 261 17 6 chr2 41959635 41959811 -211296772 + (TA)n Simple_repeat Simple_repeat 1 178 0 300 267 11 11 chr2 41959812 41959902 -211296681 - L1MC4 LINE L1 -1339 6703 6614 287 214 20 0 chr2 41959903 41960063 -211296520 + (TA)n Simple_repeat Simple_repeat 1 163 0 180 97 0 0 chr2 41960089 41960120 -211296463 + (TA)n Simple_repeat Simple_repeat 1 31 0 370 305 175 7 chr2 41960565 41960719 -211295864 - MIR SINE MIR -79 183 4 278 257 48 67 chr2 41961492 41961597 -211294986 + L2 LINE L2 3211 3313 0 342 0 0 0 chr2 41963030 41963068 -211293515 + (TG)n Simple_repeat Simple_repeat 1 38 0 641 219 115 31 chr2 41964009 41964201 -211292382 - MER63A DNA MER1_type -2 208 1 231 36 0 0 chr2 41964282 41964310 -211292273 + (TA)n Simple_repeat Simple_repeat 2 29 0 684 154 15 59 chr2 41964312 41964448 -211292135 - FLAM_C SINE Alu -8 135 6 1951 119 3 35 chr2 41965016 41965310 -211291273 + AluSx SINE Alu 1 286 -26 297 0 0 0 chr2 41965310 41965343 -211291240 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 1951 119 3 35 chr2 41965343 41965360 -211291223 + AluSx SINE Alu 286 302 -10 231 267 23 79 chr2 41968435 41968622 -211287961 + L2 LINE L2 2856 3029 -273 22 56 0 0 chr2 41968769 41968805 -211287778 + AT_rich Low_complexity Low_complexity 1 36 0 347 240 190 0 chr2 41969580 41969701 -211286882 + L1MC/D LINE L1 5609 5752 -2056 471 298 138 6 chr2 41969725 41969906 -211286677 - MIR SINE MIR -16 246 42 180 111 0 0 chr2 41969997 41970024 -211286559 + (GGGAGA)n Simple_repeat Simple_repeat 2 28 0 1896 152 0 10 chr2 41970553 41970850 -211285733 - AluJo SINE Alu -18 294 1 28 29 0 0 chr2 41972090 41972125 -211284458 + AT_rich Low_complexity Low_complexity 1 35 0 600 345 71 35 chr2 41972131 41972583 -211284000 - L3 LINE CR1 -744 833 366 257 304 74 30 chr2 41972748 41972883 -211283700 + MIR3 SINE MIR 54 194 -14 2007 138 3 10 chr2 41973331 41973627 -211282956 - AluSx SINE Alu -16 296 3 185 286 42 59 chr2 41975470 41975589 -211280994 + MIR3 SINE MIR 88 204 -4 449 370 17 6 chr2 41975666 41975839 -211280744 - MIR SINE MIR -30 232 58 615 284 74 5 chr2 41976606 41976821 -211279762 - MIR SINE MIR -1 261 32 1389 98 0 0 chr2 41976883 41977082 -211279501 + L1PB1 LINE L1 5836 6034 -117 487 139 0 0 chr2 41977082 41977154 -211279429 + AluS SINE Alu 1 72 -241 2418 101 0 25 chr2 41977195 41977319 -211279264 - L1PB1 LINE L1 -1 6150 6024 1837 148 28 0 chr2 41977319 41977479 -211279104 - AluSx SINE Alu -21 291 118 387 0 0 0 chr2 41977479 41977522 -211279061 + (TG)n Simple_repeat Simple_repeat 2 44 0 1837 148 28 0 chr2 41977522 41977644 -211278939 - AluSx SINE Alu -194 118 1 2418 101 0 25 chr2 41977644 41977885 -211278698 - L1PB1 LINE L1 -127 6024 5794 261 0 0 0 chr2 41977885 41977914 -211278669 + (TG)n Simple_repeat Simple_repeat 2 30 0 318 226 0 43 chr2 41977953 41978046 -211278537 - L1MC4 LINE L1 -1340 6702 6614 1843 107 11 0 chr2 41978052 41978323 -211278260 - L1P5 LINE L1 -360 5791 5518 349 58 2 0 chr2 41978322 41978371 -211278212 + L1P5 LINE L1 5426 5469 -682 * 634 205 160 0 chr2 41980402 41980558 -211276025 - MER5A DNA MER1_type 0 189 9 739 221 55 0 chr2 41980729 41980892 -211275691 - MER20 DNA MER1_type -6 213 42 2313 168 58 18 chr2 41982446 41982594 -211273989 + L1MB2 LINE L1 5644 5785 -386 360 43 0 0 chr2 41982594 41982640 -211273943 + (CA)n Simple_repeat Simple_repeat 2 47 0 2313 168 58 18 chr2 41982640 41982991 -211273592 + L1MB2 LINE L1 5785 6163 -8 259 143 52 39 chr2 41983425 41983502 -211273081 + A-rich Low_complexity Low_complexity 2 79 0 196 286 20 0 chr2 41984275 41984324 -211272259 + L3b LINE CR1 1429 1478 -105 2230 116 3 0 chr2 41984944 41985247 -211271336 - AluSg SINE Alu -2 308 5 1688 151 62 3 chr2 41985260 41985584 -211270999 - L1MB7 LINE L1 -16 6168 5826 329 311 30 15 chr2 41986033 41986165 -211270418 - MIR3 SINE MIR -3 205 72 34 0 0 0 chr2 41986821 41986855 -211269728 + AT_rich Low_complexity Low_complexity 1 34 0 323 246 22 78 chr2 41987033 41987212 -211269371 + L1ME4a LINE L1 5947 6115 -6 209 291 73 0 chr2 41987784 41987839 -211268744 - MER91C DNA MER1_type -35 105 47 21 0 0 0 chr2 41987986 41988007 -211268576 + AT_rich Low_complexity Low_complexity 1 21 0 285 168 30 69 chr2 41988306 41988407 -211268176 - L1MA10 LINE L1 -2 6332 6236 288 250 42 0 chr2 41988466 41988491 -211268092 - L1MA10 LINE L1 -81 6253 6229 4320 233 79 34 chr2 41988491 41989022 -211267561 - L1ME1 LINE L1 -100 6066 5560 811 143 0 16 chr2 41989022 41989148 -211267435 - FLAM_C SINE Alu -7 126 3 4320 233 79 34 chr2 41989148 41990733 -211265850 - L1ME1 LINE L1 -606 5560 3859 201 286 181 30 chr2 41992330 41992463 -211264120 + L2 LINE L2 3087 3239 -74 303 313 38 44 chr2 41993641 41993801 -211262782 - MER5A DNA MER1_type 0 189 31 379 332 133 5 chr2 41993834 41994045 -211262538 - MIR SINE MIR -23 239 2 607 301 97 65 chr2 41995069 41995441 -211261142 - L3 LINE CR1 -175 1402 1019 216 135 0 0 chr2 41995536 41995573 -211261010 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2782 91 11 3 chr2 41996918 41997290 -211259293 - THE1C LTR MaLR 0 375 1 1505 176 3 62 chr2 41997823 41998160 -211258423 + AluJo SINE Alu 1 319 0 328 20 41 0 chr2 41998269 41998318 -211258265 + (CA)n Simple_repeat Simple_repeat 2 52 0 219 211 127 14 chr2 41998322 41998393 -211258190 - MIR SINE MIR -70 192 114 23 0 0 0 chr2 41998454 41998477 -211258106 + AT_rich Low_complexity Low_complexity 1 23 0 329 275 69 46 chr2 41999422 41999553 -211257030 + MER94 DNA DNA 1 134 0 216 161 48 0 chr2 42000094 42000156 -211256427 + CT-rich Low_complexity Low_complexity 3 67 0 1109 84 42 110 chr2 42001107 42001298 -211255285 + AluY SINE Alu 1 178 -133 25 0 0 0 chr2 42002539 42002564 -211254019 + AT_rich Low_complexity Low_complexity 1 25 0 408 275 118 22 chr2 42002676 42002905 -211253678 - L1ME LINE L1 -297 5824 5574 2432 93 39 3 chr2 42003006 42003361 -211253222 + L1PA16 LINE L1 5790 6157 -9 288 358 169 26 chr2 42003672 42004501 -211252082 + L2 LINE L2 1907 2853 -461 384 22 0 0 chr2 42004508 42004553 -211252030 + (CA)n Simple_repeat Simple_repeat 1 45 0 24 32 0 0 chr2 42005536 42005567 -211251016 + AT_rich Low_complexity Low_complexity 1 31 0 360 270 25 69 chr2 42006539 42006698 -211249885 + MIR SINE MIR 111 262 0 2187 71 14 11 chr2 42007020 42007340 -211249243 - AluSx SINE Alu 0 321 1 698 187 8 15 chr2 42007427 42007561 -211249022 - FRAM SINE Alu -43 133 1 2442 84 0 0 chr2 42008604 42008915 -211247668 + AluY SINE Alu 1 311 0 2000 133 10 0 chr2 42009215 42009517 -211247066 + AluSq SINE Alu 1 305 -8 296 271 65 37 chr2 42009573 42009680 -211246903 - MIR3 SINE MIR -5 203 94 21 0 0 0 chr2 42010242 42010263 -211246320 + AT_rich Low_complexity Low_complexity 1 21 0 501 259 105 6 chr2 42012238 42012400 -211244183 + MIR SINE MIR 15 192 -70 319 111 16 16 chr2 42013519 42013582 -211243001 + (TC)n Simple_repeat Simple_repeat 2 64 0 254 288 0 0 chr2 42013778 42013837 -211242746 + (TG)n Simple_repeat Simple_repeat 1 59 0 268 211 132 13 chr2 42015379 42015455 -211241128 + MER103 DNA DNA 30 114 -52 2205 118 0 0 chr2 42015726 42016022 -211240561 + AluSx SINE Alu 1 296 -16 198 103 0 0 chr2 42016745 42016774 -211239809 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 243 314 48 19 chr2 42017053 42017158 -211239425 + MIR SINE MIR 86 193 -69 1130 215 63 70 chr2 42017420 42017848 -211238735 + LTR37B LTR ERV1 38 462 -6 229 341 133 0 chr2 42018410 42018545 -211238038 + MIR3 SINE MIR 43 195 -13 266 277 0 30 chr2 42018613 42018714 -211237869 - MER103 DNA DNA -66 100 3 228 271 14 0 chr2 42018907 42018977 -211237606 - MIR SINE MIR -5 257 187 2824 65 0 3 chr2 42021101 42021473 -211235110 + L1PA8 LINE L1 5802 6172 0 321 89 0 0 chr2 42021495 42021540 -211235043 + (A)n Simple_repeat Simple_repeat 1 45 0 378 257 18 18 chr2 42021816 42021925 -211234658 + MER5A DNA MER1_type 41 149 -40 21 0 0 0 chr2 42022394 42022415 -211234168 + AT_rich Low_complexity Low_complexity 1 21 0 255 258 91 0 chr2 42022547 42022613 -211233970 + MIR SINE MIR 45 116 -146 578 233 8 8 chr2 42022616 42022745 -211233838 - FRAM SINE Alu -46 130 2 469 313 57 23 chr2 42022877 42023053 -211233530 + MIR SINE MIR 21 202 -60 393 322 66 22 chr2 42023598 42023781 -211232802 + MIR3 SINE MIR 3 193 -15 854 269 28 5 chr2 42024905 42025117 -211231466 + MIR SINE MIR 34 250 -12 1649 186 3 10 chr2 42025647 42025938 -211230645 + AluJo SINE Alu 1 289 -23 297 0 0 0 chr2 42026035 42026068 -211230515 + (A)n Simple_repeat Simple_repeat 1 33 0 672 322 42 4 chr2 42026228 42026464 -211230119 - MIR SINE MIR -12 250 6 206 345 95 26 chr2 42027972 42028088 -211228495 + L3b LINE CR1 1427 1550 -33 968 272 78 12 chr2 42029434 42029765 -211226818 - L1MC/D LINE L1 -2097 5711 5359 312 289 0 0 chr2 42030473 42030563 -211226020 + MER103 DNA DNA 2 91 -75 205 191 21 0 chr2 42030747 42030794 -211225789 + MIR SINE MIR 98 145 -117 309 285 136 76 chr2 42031471 42031787 -211224796 + L2 LINE L2 2938 3272 0 1814 138 17 34 chr2 42032669 42032965 -211223618 + AluJo SINE Alu 13 303 -9 844 93 0 23 chr2 42033019 42033148 -211223435 + L1PA7 LINE L1 6026 6151 -3 207 0 0 0 chr2 42033496 42033519 -211223064 + (A)n Simple_repeat Simple_repeat 1 23 0 218 156 22 0 chr2 42033591 42033636 -211222947 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 185 136 0 23 chr2 42034080 42034124 -211222459 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1201 170 90 7 chr2 42034566 42034843 -211221740 + MER33 DNA MER1_type 25 324 0 226 357 195 11 chr2 42034853 42035125 -211221458 - L2 LINE L2 -503 2811 2490 404 244 134 24 chr2 42035465 42035592 -211220991 - MIR SINE MIR -10 252 112 366 327 10 10 chr2 42035595 42035696 -211220887 + L2 LINE L2 3153 3253 -19 743 217 74 93 chr2 42035935 42036193 -211220390 - MIR SINE MIR 0 262 10 2145 114 20 0 chr2 42037336 42037642 -211218941 - AluSx SINE Alu 0 312 1 1111 312 39 31 chr2 42038035 42038525 -211218058 - MER20B DNA MER1_type -287 496 3 216 0 0 0 chr2 42038785 42038809 -211217774 + (ATG)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr2 42039346 42039366 -211217217 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 207 69 0 0 chr2 42039798 42039827 -211216756 + (TG)n Simple_repeat Simple_repeat 2 30 0 1449 219 21 3 chr2 42041166 42041454 -211215129 + AluJo SINE Alu 1 293 -19 464 246 115 8 chr2 42041555 42041685 -211214898 + MIR SINE MIR 109 252 -10 195 274 251 74 chr2 42041794 42041969 -211214614 + MIR SINE MIR 56 261 -1 * 367 273 29 46 chr2 42041952 42042158 -211214425 - MIR SINE MIR -49 213 16 1933 314 77 18 chr2 42043068 42043990 -211212593 - L3 LINE CR1 -420 1157 182 1022 82 129 12 chr2 42044052 42044223 -211212360 - L1PA13 LINE L1 -19 6144 5954 2672 184 4 0 chr2 42044223 42044733 -211211850 + L1P LINE L1 4728 5239 -907 248 200 100 44 chr2 42046207 42046297 -211210286 - MIR SINE MIR -50 212 118 390 317 0 28 chr2 42046935 42047080 -211209503 + MIR SINE MIR 119 259 -3 395 356 29 0 chr2 42048963 42049137 -211207446 - MIR SINE MIR -7 255 77 650 188 0 0 chr2 42049677 42049794 -211206789 + FLAM_C SINE Alu 1 117 -26 22 0 0 0 chr2 42049795 42049817 -211206766 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr2 42049817 42049839 -211206744 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 187 397 43 9 chr2 42050002 42050118 -211206465 - L2 LINE L2 -641 2673 2554 1619 196 7 0 chr2 42051168 42051472 -211205111 + AluJo SINE Alu 1 306 0 238 80 40 40 chr2 42052014 42052064 -211204519 + GA-rich Low_complexity Low_complexity 2 51 0 1826 223 152 49 chr2 42052355 42052948 -211203635 + MLT1E1 LTR MaLR 1 654 0 1158 273 128 36 chr2 42053463 42054003 -211202580 - L2 LINE L2 0 3313 2723 766 279 78 41 chr2 42054183 42054570 -211202013 + L2 LINE L2 2910 3310 -3 683 267 40 0 chr2 42054602 42054752 -211201831 - MER5A DNA MER1_type -33 156 1 225 309 32 63 chr2 42055582 42055708 -211200875 - MIR SINE MIR -78 184 63 182 152 0 0 chr2 42056677 42056710 -211199873 + L2 LINE L2 3018 3050 -222 3340 112 12 2 chr2 42057060 42057552 -211199031 + LOR1a LTR ERV1 1 497 0 22 0 0 0 chr2 42058266 42058288 -211198295 + AT_rich Low_complexity Low_complexity 1 22 0 188 267 167 83 chr2 42058928 42059108 -211197475 - MIR SINE MIR 0 262 68 1318 196 55 41 chr2 42059426 42059717 -211196866 + AluJo SINE Alu 1 295 -17 23 0 0 0 chr2 42060101 42060124 -211196459 + AT_rich Low_complexity Low_complexity 1 23 0 249 286 94 37 chr2 42061122 42061367 -211195216 + L1ME4a LINE L1 5561 5819 -302 364 319 84 11 chr2 42061569 42061760 -211194823 + L1ME4a LINE L1 5902 6106 -15 21 36 0 0 chr2 42062056 42062084 -211194499 + AT_rich Low_complexity Low_complexity 1 28 0 2046 137 3 0 chr2 42063111 42063410 -211193173 + AluSx SINE Alu 9 308 -4 246 336 9 0 chr2 42064453 42064563 -211192020 + (TA)n Simple_repeat Simple_repeat 2 112 0 218 0 0 87 chr2 42065254 42065300 -211191283 + (TA)n Simple_repeat Simple_repeat 2 43 0 222 37 0 0 chr2 42065377 42065404 -211191179 + (CA)n Simple_repeat Simple_repeat 2 28 0 292 255 20 20 chr2 42065430 42065528 -211191055 - L1ME LINE L1 -254 5867 5770 767 257 16 0 chr2 42065893 42066076 -211190507 + MER5A DNA MER1_type 2 187 -2 219 188 0 0 chr2 42066590 42066638 -211189945 + (TA)n Simple_repeat Simple_repeat 2 49 0 495 218 12 8 chr2 42067478 42067727 -211188856 + GA-rich Low_complexity Low_complexity 1 250 0 896 186 69 20 chr2 42069406 42069610 -211186973 + MER20 DNA MER1_type 1 214 -5 230 56 28 0 chr2 42069890 42069926 -211186657 + (TG)n Simple_repeat Simple_repeat 1 37 0 229 242 45 0 chr2 42071098 42071164 -211185419 - HAL1b LINE L1 -276 1072 1004 21 0 0 0 chr2 42071588 42071609 -211184974 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 42072196 42072225 -211184358 + (A)n Simple_repeat Simple_repeat 1 29 0 289 308 26 0 chr2 42072554 42072632 -211183951 + MIR SINE MIR 168 247 -15 207 304 0 51 chr2 42073055 42073134 -211183449 + MER5B DNA MER1_type 7 81 -97 21 0 0 0 chr2 42074025 42074046 -211182537 + AT_rich Low_complexity Low_complexity 1 21 0 237 203 68 0 chr2 42074182 42074241 -211182342 - L1ME LINE L1 -2042 5766 5704 1917 181 68 32 chr2 42075269 42075711 -211180872 + LTR2B LTR ERV1 32 489 -1 211 341 12 0 chr2 42076717 42076799 -211179784 + L2 LINE L2 2892 2974 -298 261 83 0 0 chr2 42077015 42077051 -211179532 + (A)n Simple_repeat Simple_repeat 1 36 0 3641 125 58 3 chr2 42077417 42078019 -211178564 + MER41B LTR ERV1 1 635 0 672 183 16 8 chr2 42079516 42079642 -211176941 - FLAM_C SINE Alu -6 127 1 21 0 0 0 chr2 42081833 42081854 -211174729 + AT_rich Low_complexity Low_complexity 1 21 0 289 222 38 162 chr2 42082422 42082531 -211174052 + MIR3 SINE MIR 17 95 -113 1970 128 3 0 chr2 42082531 42082813 -211173770 - AluSx SINE Alu -29 283 1 289 222 38 162 chr2 42082813 42082888 -211173695 + MIR3 SINE MIR 95 178 -30 193 314 157 0 chr2 42083145 42083215 -211173368 + L2 LINE L2 3184 3264 -8 36 62 0 0 chr2 42085982 42086046 -211170537 + AT_rich Low_complexity Low_complexity 1 64 0 488 138 85 0 chr2 42086054 42086148 -211170435 - L1MA8 LINE L1 -42 6249 6148 214 316 132 23 chr2 42086242 42086416 -211170167 - MIR SINE MIR -50 212 20 229 273 18 0 chr2 42086596 42086651 -211169932 - MARNA DNA Mariner -395 191 136 187 286 0 0 chr2 42086706 42086748 -211169835 + L2 LINE L2 3215 3256 -16 263 291 15 45 chr2 42086882 42087016 -211169567 + L1ME LINE L1 5588 5717 -404 356 329 36 16 chr2 42087346 42087598 -211168985 - MIR SINE MIR -3 259 3 1238 61 18 0 chr2 42088353 42088516 -211168067 - L1PA4 LINE L1 -4 6151 5986 3586 17 0 2 chr2 42088516 42088926 -211167657 + L1PA4 LINE L1 5459 5867 -288 228 336 48 10 chr2 42089879 42089983 -211166600 - L3 LINE CR1 -627 950 843 1597 94 49 130 chr2 42091163 42091307 -211165276 + AluSx SINE Alu 21 128 -184 477 0 0 0 chr2 42091307 42091360 -211165223 + (CA)n Simple_repeat Simple_repeat 2 54 0 1597 94 49 130 chr2 42091360 42091523 -211165060 + AluSx SINE Alu 128 303 -9 456 187 0 0 chr2 42091606 42091681 -211164902 - MER94 DNA DNA -59 75 1 444 127 25 13 chr2 42092247 42092326 -211164257 - MADE1 DNA Mariner 0 80 1 954 103 7 19 chr2 42092608 42092763 -211163820 - L1PA15 LINE L1 -2 6163 6011 1042 159 0 0 chr2 42092947 42093110 -211163473 - AluJb SINE Alu -3 309 147 229 348 0 14 chr2 42093110 42093179 -211163404 - MIR SINE MIR -188 74 7 225 0 0 0 chr2 42093318 42093343 -211163240 + (CA)n Simple_repeat Simple_repeat 2 26 0 265 414 29 0 chr2 42094504 42094644 -211161939 + L2 LINE L2 3129 3272 0 443 295 7 0 chr2 42094891 42095030 -211161553 + CT-rich Low_complexity Low_complexity 1 140 0 528 238 63 0 chr2 42096324 42096450 -211160133 + MIR SINE MIR 56 189 -73 428 237 0 6 chr2 42096503 42096672 -211159911 + (CCA)n Simple_repeat Simple_repeat 1 168 0 280 285 66 16 chr2 42096708 42096853 -211159730 - MIR SINE MIR -55 153 2 323 295 230 7 chr2 42098298 42098437 -211158146 + MIR SINE MIR 50 219 -43 26 50 0 0 chr2 42100733 42100773 -211155810 + AT_rich Low_complexity Low_complexity 1 40 0 1027 47 0 0 chr2 42101295 42101422 -211155161 + L1P4 LINE L1 5614 5740 -428 222 118 0 0 chr2 42102938 42102972 -211153611 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 270 0 0 0 chr2 42103871 42103901 -211152682 + (CA)n Simple_repeat Simple_repeat 1 30 0 1037 262 97 44 chr2 42107618 42107849 -211148734 - L2 LINE L2 0 3313 3096 246 81 0 0 chr2 42107849 42107886 -211148697 + (TG)n Simple_repeat Simple_repeat 2 38 0 1037 262 97 44 chr2 42107886 42108300 -211148283 - L2 LINE L2 -217 3096 2632 330 276 59 46 chr2 42108551 42108703 -211147880 + L2 LINE L2 2664 2817 -497 230 204 93 0 chr2 42108988 42109042 -211147541 - MER91C DNA MER1_type -53 87 29 410 303 45 0 chr2 42109044 42109176 -211147407 - MIR SINE MIR -78 184 47 595 236 22 87 chr2 42111184 42111222 -211145361 + L2 LINE L2 3099 3138 -175 1718 136 61 41 chr2 42111222 42111517 -211145066 - AluSq SINE Alu -12 301 1 595 236 22 87 chr2 42111517 42111707 -211144876 + L2 LINE L2 3138 3312 -1 518 276 84 42 chr2 42112400 42112614 -211143969 - MIR SINE MIR 0 262 40 340 323 62 31 chr2 42113880 42114010 -211142573 - L2 LINE L2 -1 3271 3138 418 289 108 6 chr2 42114144 42114310 -211142273 - MER5A DNA MER1_type 0 189 7 402 351 38 0 chr2 42115920 42116051 -211140532 - L2 LINE L2 0 3272 3137 8156 112 20 8 chr2 42116080 42117414 -211139169 + L1PA8 LINE L1 3841 5190 -956 655 76 0 42 chr2 42117413 42117492 -211139091 - L1P4 LINE L1 -377 5778 5713 * 1390 36 0 0 chr2 42117492 42117657 -211138926 + L1PA3 LINE L1 5988 6152 -3 655 76 0 42 chr2 42117657 42117706 -211138877 - L1P4 LINE L1 -442 5713 5664 6314 95 4 8 chr2 42117727 42118725 -211137858 + L1PA8 LINE L1 5172 6165 -7 346 315 102 8 chr2 42119120 42119247 -211137336 + MIR3 SINE MIR 27 165 -43 234 320 23 81 chr2 42119475 42119502 -211137081 - MIR3 SINE MIR -26 182 155 1778 164 10 23 chr2 42119502 42119806 -211136777 + AluJo SINE Alu 1 300 -12 234 320 23 81 chr2 42119806 42119950 -211136633 - MIR3 SINE MIR -53 155 21 1081 261 56 0 chr2 42120035 42120341 -211136242 + MER58B DNA MER1_type 1 323 -18 503 275 34 17 chr2 42120488 42120666 -211135917 - MIR SINE MIR 0 262 82 183 42 0 0 chr2 42171200 42171224 -211085359 + (TG)n Simple_repeat Simple_repeat 1 24 0 397 0 19 19 chr2 42172579 42172633 -211083950 + (CA)n Simple_repeat Simple_repeat 1 54 0 212 273 20 10 chr2 42172917 42173016 -211083567 + G-rich Low_complexity Low_complexity 5 104 0 * 249 245 29 20 chr2 42173001 42173103 -211083480 + (CCCG)n Simple_repeat Simple_repeat 3 105 0 21 36 0 0 chr2 42173103 42173131 -211083452 + GC_rich Low_complexity Low_complexity 1 28 0 183 352 63 44 chr2 42173972 42174131 -211082452 - MER5A DNA MER1_type 0 189 28 757 225 0 22 chr2 42174369 42174551 -211082032 + MER5B DNA MER1_type 1 178 0 192 322 144 0 chr2 42174605 42174695 -211081888 - MER5A DNA MER1_type -77 112 10 2664 45 0 3 chr2 42176882 42177191 -211079392 + AluY SINE Alu 1 308 -3 657 271 96 25 chr2 42177342 42177582 -211079001 + MIR SINE MIR 6 262 0 182 247 21 118 chr2 42178677 42178770 -211077813 - MIR SINE MIR -73 189 106 525 301 0 35 chr2 42178775 42178948 -211077635 - MER5B DNA MER1_type -11 167 1 187 252 0 0 chr2 42178948 42178985 -211077598 - MIR SINE MIR -111 97 60 684 277 47 35 chr2 42179870 42180126 -211076457 - L2 LINE L2 -4 3309 3051 2115 100 30 13 chr2 42181421 42181720 -211074863 - AluSx SINE Alu -8 304 1 555 236 93 12 chr2 42182111 42182272 -211074311 - MER97b DNA MER1_type? -874 179 6 2327 118 0 0 chr2 42182849 42183154 -211073429 - AluSx SINE Alu -7 305 1 29 101 0 0 chr2 42183166 42183265 -211073318 + AT_rich Low_complexity Low_complexity 1 99 0 1674 180 7 0 chr2 42183374 42183652 -211072931 + AluJo SINE Alu 1 280 -32 263 0 81 0 chr2 42183652 42183689 -211072894 + A-rich Low_complexity Low_complexity 1 40 0 195 345 179 20 chr2 42183784 42184187 -211072396 - L2 LINE L2 0 3313 2847 561 30 0 0 chr2 42184669 42184736 -211071847 + (CA)n Simple_repeat Simple_repeat 2 68 0 2035 136 0 0 chr2 42184762 42185042 -211071541 - AluSx SINE Alu -32 280 1 261 125 25 0 chr2 42185067 42185107 -211071476 - MER57A LTR ERV1 -68 335 295 1672 253 137 9 chr2 42185930 42186559 -211070024 + MER20B DNA MER1_type 6 714 -69 1452 195 55 65 chr2 42186591 42186991 -211069592 + MSTD LTR MaLR 1 396 0 224 269 167 0 chr2 42187353 42187431 -211069152 + MIR SINE MIR 57 147 -61 347 325 8 26 chr2 42188789 42188906 -211067677 + MIR3 SINE MIR 84 198 -10 365 289 21 7 chr2 42189491 42189633 -211066950 - L1MC5 LINE L1 -51 7910 7767 702 199 0 34 chr2 42189642 42189788 -211066795 + FLAM_A SINE Alu 1 141 -1 366 221 57 29 chr2 42189794 42189934 -211066649 - L1MC5 LINE L1 -189 7772 7629 1542 174 191 6 chr2 42190040 42190401 -211066182 + MSTA LTR MaLR 1 428 0 288 221 37 131 chr2 42190436 42190901 -211065682 - L1MC5 LINE L1 -471 7490 7070 292 263 88 81 chr2 42191095 42191604 -211064979 + L1ME4a LINE L1 5544 6056 -65 30 27 0 0 chr2 42191638 42191675 -211064908 + AT_rich Low_complexity Low_complexity 1 37 0 211 250 250 54 chr2 42192009 42192157 -211064426 - MIR SINE MIR -73 189 13 592 233 8 31 chr2 42193386 42193515 -211063068 - FLAM_C SINE Alu -7 126 1 318 310 40 0 chr2 42193515 42193615 -211062968 - L2 LINE L2 -14 3299 3196 279 357 202 6 chr2 42193973 42194141 -211062442 + L3 LINE CR1 1119 1319 -258 464 301 99 34 chr2 42194176 42194468 -211062115 + L2 LINE L2 3003 3313 0 216 368 103 0 chr2 42194620 42194756 -211061827 - L3 LINE CR1 -111 1466 1317 424 287 23 0 chr2 42195471 42195600 -211060983 - MIR SINE MIR -31 231 100 2373 56 0 0 chr2 42195970 42196280 -211060303 - AluY SINE Alu 0 310 1 618 163 18 24 chr2 42196282 42196448 -211060135 - Charlie1 DNA MER1_type -44 2717 2553 294 163 43 22 chr2 42196451 42196543 -211060040 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 498 316 90 35 chr2 42197249 42197691 -211058892 - L2 LINE L2 -123 3190 2722 189 308 0 0 chr2 42198197 42198249 -211058334 + MIR SINE MIR 93 144 -64 226 181 14 14 chr2 42198546 42198618 -211057965 + (TG)n Simple_repeat Simple_repeat 2 73 0 2489 79 0 0 chr2 42199614 42199919 -211056664 - AluSq SINE Alu -8 305 1 1589 206 39 11 chr2 42201095 42201450 -211055133 + MLT1A1 LTR MaLR 1 365 0 183 167 0 0 chr2 42201953 42201995 -211054588 + (TG)n Simple_repeat Simple_repeat 1 42 0 426 322 58 40 chr2 42202175 42202349 -211054234 + MIR SINE MIR 8 184 -78 302 336 43 9 chr2 42202798 42202914 -211053669 - MER5A DNA MER1_type -9 180 61 474 182 0 0 chr2 42202926 42203014 -211053569 - L1MB1 LINE L1 -1 6167 6080 270 203 31 0 chr2 42203168 42203232 -211053351 - MER69 DNA AcHobo 0 2526 2461 493 231 25 0 chr2 42203238 42203359 -211053224 - MER69 DNA AcHobo -2377 149 26 703 207 15 7 chr2 42203399 42203534 -211053049 - MIR SINE MIR -107 155 20 2388 48 0 45 chr2 42203637 42203951 -211052632 - AluY SINE Alu -11 300 1 32 95 0 0 chr2 42204056 42204151 -211052432 + AT_rich Low_complexity Low_complexity 1 95 0 1087 245 141 43 chr2 42204390 42204851 -211051732 + MLT1J LTR MaLR 6 511 0 186 266 16 62 chr2 42205328 42205392 -211051191 + L2 LINE L2 3025 3085 -228 2305 105 55 19 chr2 42206793 42207155 -211049428 + THE1C LTR MaLR 1 375 0 1366 31 0 0 chr2 42207570 42207732 -211048851 - L1PA5 LINE L1 0 6154 5993 1113 86 0 0 chr2 42207732 42207884 -211048699 + L1PA5 LINE L1 5836 5987 -167 210 143 0 0 chr2 42209300 42209335 -211047248 + (TG)n Simple_repeat Simple_repeat 2 36 0 423 310 49 40 chr2 42209869 42210095 -211046488 - MIR SINE MIR -1 261 34 205 200 40 40 chr2 42211945 42211995 -211044588 - L3 LINE CR1 -13 1564 1515 5517 28 8 0 chr2 42212015 42212668 -211043915 - L1PA3 LINE L1 -1677 4469 3812 * 7676 32 1 0 chr2 42212665 42214369 -211042214 + L1PA3 LINE L1 4464 6167 0 1167 119 0 0 chr2 42214498 42214658 -211041925 - AluSg/x SINE Alu -8 304 145 272 137 20 0 chr2 42214738 42214789 -211041794 + CT-rich Low_complexity Low_complexity 3 54 0 210 37 0 0 chr2 42214963 42214990 -211041593 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1838 28 0 0 chr2 42215210 42215428 -211041155 - L1P1 LINE L1 -360 5795 5578 514 48 0 0 chr2 42215428 42215488 -211041095 + L1PA5 LINE L1 6077 6139 -15 396 0 0 0 chr2 42215488 42215532 -211041051 + (TA)n Simple_repeat Simple_repeat 2 45 0 244 271 39 70 chr2 42215714 42215843 -211040740 - MIR SINE MIR -34 228 104 240 340 85 14 chr2 42216518 42216659 -211039924 - MIR3 SINE MIR -41 167 17 225 130 22 22 chr2 42216796 42216842 -211039741 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 2557 7 0 0 chr2 42217643 42217932 -211038651 + L1PA2 LINE L1 5864 6152 -3 351 331 47 16 chr2 42218141 42218268 -211038315 - L2 LINE L2 -8 3305 3175 402 344 125 47 chr2 42218428 42219083 -211037500 - L2 LINE L2 -337 2977 2272 546 319 171 36 chr2 42219213 42219740 -211036843 + L3 LINE CR1 256 853 -724 200 356 94 59 chr2 42219811 42220013 -211036570 + L3 LINE CR1 1116 1324 -253 894 233 85 5 chr2 42220070 42220293 -211036290 + MIR SINE MIR 1 241 -21 261 219 0 0 chr2 42220906 42220970 -211035613 + L1MA9 LINE L1 6226 6289 -23 198 0 0 0 chr2 42220977 42220999 -211035584 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 278 238 30 30 chr2 42221187 42221288 -211035295 - MER103 DNA DNA -3 163 63 408 300 0 0 chr2 42221481 42221611 -211034972 - MER94 DNA DNA 0 134 5 261 0 0 0 chr2 42221643 42221672 -211034911 + (T)n Simple_repeat Simple_repeat 1 29 0 578 316 132 9 chr2 42221674 42222094 -211034489 + L2 LINE L2 2650 3120 -193 285 305 95 11 chr2 42223244 42223339 -211033244 + L2 LINE L2 3168 3270 -2 222 263 138 0 chr2 42223337 42223417 -211033166 - MIR SINE MIR 0 262 172 * 675 251 65 11 chr2 42223774 42223993 -211032590 + L1ME3A LINE L1 5928 6164 -6 6532 155 8 6 chr2 42224271 42225971 -211030612 + L1MA1 LINE L1 4106 5809 -493 2409 86 37 0 chr2 42225981 42226331 -211030252 + L1MA1 LINE L1 5933 6295 -7 23 54 0 0 chr2 42226332 42226369 -211030214 + AT_rich Low_complexity Low_complexity 1 37 0 263 230 16 111 chr2 42226853 42226979 -211029604 + MER103 DNA DNA 51 164 -2 730 261 64 5 chr2 42228482 42228670 -211027913 + MIR SINE MIR 53 251 -11 259 326 67 11 chr2 42228681 42228770 -211027813 - MIR SINE MIR -155 107 14 423 274 163 20 chr2 42229681 42229834 -211026749 - MER5B DNA MER1_type -1 177 3 234 0 0 0 chr2 42230285 42230311 -211026272 + (T)n Simple_repeat Simple_repeat 1 26 0 2053 86 0 57 chr2 42230659 42230973 -211025610 - AluSc SINE Alu -13 296 1 23 0 0 0 chr2 42230982 42231005 -211025578 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr2 42233528 42233548 -211023035 + (T)n Simple_repeat Simple_repeat 1 20 0 224 222 0 0 chr2 42233748 42233793 -211022790 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 22 0 0 0 chr2 42234010 42234032 -211022551 + AT_rich Low_complexity Low_complexity 1 22 0 331 274 98 0 chr2 42234445 42234598 -211021985 + L1MC5 LINE L1 7759 7926 -35 380 317 57 63 chr2 42235015 42235349 -211021234 + MLT1L LTR MaLR 211 542 -73 220 355 13 0 chr2 42235382 42235458 -211021125 + MIR SINE MIR 26 102 -160 229 139 0 0 chr2 42235920 42235956 -211020627 - tRNA-Gly-GGA tRNA tRNA -39 36 1 345 339 40 24 chr2 42236418 42236542 -211020041 + L2 LINE L2 3147 3272 0 7393 208 29 43 chr2 42237251 42239960 -211016623 - L1MB8 LINE L1 -289 5889 3226 638 243 44 106 chr2 42239985 42240652 -211015931 - L1M4 LINE L1 -3736 3221 2610 1149 248 86 10 chr2 42240693 42241471 -211015112 - L1M4 LINE L1 -4442 2696 1603 2002 311 72 27 chr2 42241479 42242372 -211014211 - L1M4 LINE L1 -5916 943 11 209 343 30 0 chr2 42242615 42242682 -211013901 - MIR SINE MIR -68 140 72 1585 196 6 13 chr2 42243187 42243553 -211013030 + L1PB4 LINE L1 5847 6210 0 2117 209 107 5 chr2 42243807 42244587 -211011996 - L1MC/D LINE L1 -427 6209 5360 673 289 15 8 chr2 42244589 42244849 -211011734 - L1MC/D LINE L1 -2488 4052 3791 8628 228 73 32 chr2 42244856 42247706 -211008877 - L1MDa LINE L1 -3519 3021 16 2092 97 0 62 chr2 42247969 42248278 -211008305 + AluSg SINE Alu 1 290 -20 720 212 0 0 chr2 42248359 42248491 -211008092 + FLAM_A SINE Alu 1 132 -1 44 46 0 0 chr2 42248652 42248717 -211007866 + AT_rich Low_complexity Low_complexity 1 65 0 261 325 103 57 chr2 42249024 42249461 -211007122 + L2 LINE L2 2155 2611 -703 3268 74 2 2 chr2 42249717 42250221 -211006362 - L1PA7 LINE L1 -468 5686 5183 3280 73 0 13 chr2 42250221 42250652 -211005931 + L1PA7 LINE L1 5710 6153 -1 236 250 0 0 chr2 42251048 42251096 -211005487 + GA-rich Low_complexity Low_complexity 4 51 0 286 250 210 20 chr2 42251104 42251204 -211005379 + MER5B DNA MER1_type 60 178 0 229 216 0 0 chr2 42252363 42252414 -211004169 - L1M4 LINE L1 -917 5229 5179 440 327 122 42 chr2 42252491 42252827 -211003756 - L2 LINE L2 -528 2786 2424 231 36 0 0 chr2 42252827 42252855 -211003728 + (CAATA)n Simple_repeat Simple_repeat 2 29 0 1668 115 0 8 chr2 42252887 42253122 -211003461 - AluSg SINE Alu -75 235 3 23 0 0 0 chr2 42253133 42253156 -211003427 + AT_rich Low_complexity Low_complexity 1 23 0 197 295 66 57 chr2 42253350 42253472 -211003111 - L2 LINE L2 -309 2963 2841 910 169 82 68 chr2 42258467 42258674 -210997909 - AluJb SINE Alu -16 296 87 260 272 26 92 chr2 42259035 42259171 -210997412 - MIR SINE MIR -75 133 50 23 0 0 0 chr2 42259615 42259638 -210996945 + AT_rich Low_complexity Low_complexity 1 23 0 1586 164 7 41 chr2 42259688 42259844 -210996739 - AluJo SINE Alu -30 282 139 2281 79 0 30 chr2 42259844 42260149 -210996434 - AluY SINE Alu -15 296 1 840 231 19 9 chr2 42260149 42260284 -210996299 - AluJo SINE Alu -175 137 1 1586 164 7 41 chr2 42260149 42260284 -210996299 - AluJo SINE Alu -173 139 1 225 0 0 0 chr2 42260714 42260739 -210995844 + (A)n Simple_repeat Simple_repeat 1 25 0 303 28 0 0 chr2 42261599 42261635 -210994948 + (TA)n Simple_repeat Simple_repeat 1 36 0 232 356 60 28 chr2 42261777 42262061 -210994522 + L2 LINE L2 2591 2883 -431 265 289 52 21 chr2 42262080 42262177 -210994406 + MER103 DNA DNA 66 165 -1 1387 142 78 0 chr2 42262295 42262527 -210994056 - AluSx SINE Alu -1 311 62 1525 152 3 95 chr2 42262636 42262972 -210993611 + AluJo SINE Alu 1 305 -7 2037 136 7 3 chr2 42262979 42263288 -210993295 + AluSg SINE Alu 1 310 0 1749 170 0 29 chr2 42263397 42263709 -210992874 - AluSx SINE Alu -9 303 1 284 354 102 81 chr2 42263955 42264277 -210992306 + L2 LINE L2 2925 3253 -19 234 305 8 85 chr2 42264716 42264834 -210991749 + MIR SINE MIR 16 124 -84 3031 161 47 69 chr2 42265054 42265761 -210990822 - LTR8 LTR ERV1 0 691 1 816 316 57 38 chr2 42266185 42266638 -210989945 + LTR33 LTR ERVL 10 471 -50 2180 97 7 0 chr2 42266924 42267213 -210989370 + AluSp SINE Alu 4 294 -19 384 22 0 0 chr2 42267221 42267266 -210989317 + (CA)n Simple_repeat Simple_repeat 2 46 0 409 370 63 55 chr2 42267424 42268163 -210988420 + L2 LINE L2 2533 3268 -4 192 322 151 33 chr2 42268493 42268645 -210987938 - MER5A DNA MER1_type -1 188 19 2340 78 0 0 chr2 42268876 42269169 -210987414 + AluY SINE Alu 1 293 -18 232 210 40 40 chr2 42269326 42269426 -210987157 + L1MC4 LINE L1 6607 6706 -1336 440 263 95 28 chr2 42269954 42270133 -210986450 + MIR3 SINE MIR 18 208 0 180 0 0 0 chr2 42270600 42270620 -210985963 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 22 0 0 0 chr2 42270684 42270706 -210985877 + AT_rich Low_complexity Low_complexity 1 22 0 193 150 10 40 chr2 42270815 42270915 -210985668 + (TA)n Simple_repeat Simple_repeat 1 97 0 254 291 0 0 chr2 42272017 42272072 -210984511 - MIR SINE MIR -129 133 79 405 325 39 26 chr2 42272777 42272931 -210983652 + MER5B DNA MER1_type 23 178 0 366 23 0 0 chr2 42273307 42273350 -210983233 + (TG)n Simple_repeat Simple_repeat 2 44 0 234 271 0 43 chr2 42275411 42275481 -210981102 - MIR SINE MIR -87 175 109 347 252 134 17 chr2 42275543 42275662 -210980921 - MER5B DNA MER1_type -43 135 3 345 250 102 31 chr2 42276417 42276545 -210980038 + MIR3 SINE MIR 20 156 -52 282 73 0 0 chr2 42278571 42278612 -210977971 + (CA)n Simple_repeat Simple_repeat 2 42 0 34 65 0 0 chr2 42279610 42279672 -210976911 + AT_rich Low_complexity Low_complexity 1 62 0 309 349 101 0 chr2 42280124 42280253 -210976330 + L2 LINE L2 3124 3265 -7 807 284 53 53 chr2 42280688 42281256 -210975327 + L1MC5 LINE L1 7347 7914 -47 21 0 0 0 chr2 42282026 42282047 -210974536 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr2 42282790 42282812 -210973771 + AT_rich Low_complexity Low_complexity 1 22 0 1127 60 0 13 chr2 42284554 42284705 -210971878 - L1PA5 LINE L1 0 6154 6006 1111 30 0 0 chr2 42284707 42284840 -210971743 + L1PA5 LINE L1 5840 5972 -182 201 386 35 58 chr2 42285030 42285201 -210971382 - L2 LINE L2 -89 3183 3017 1283 177 87 7 chr2 42285395 42285695 -210970888 - MER33 DNA MER1_type 0 324 1 21 0 0 0 chr2 42286260 42286281 -210970302 + AT_rich Low_complexity Low_complexity 1 21 0 2812 6 0 0 chr2 42287618 42287929 -210968654 + AluYa5 SINE Alu 1 311 0 23 54 0 0 chr2 42288198 42288235 -210968348 + AT_rich Low_complexity Low_complexity 1 37 0 1649 234 85 13 chr2 42288377 42288974 -210967609 - MER114 LTR ERV -8 640 1 26 64 0 0 chr2 42289011 42289058 -210967525 + AT_rich Low_complexity Low_complexity 1 47 0 2170 94 23 29 chr2 42289236 42289543 -210967040 + AluSg SINE Alu 2 306 -4 439 184 56 72 chr2 42289745 42289870 -210966713 + MIR SINE MIR 69 191 -71 2273 99 0 3 chr2 42290878 42291180 -210965403 + AluSc SINE Alu 1 301 -8 21 57 0 0 chr2 42291266 42291301 -210965282 + AT_rich Low_complexity Low_complexity 1 35 0 26 64 0 0 chr2 42291662 42291709 -210964874 + AT_rich Low_complexity Low_complexity 1 47 0 398 179 26 13 chr2 42291939 42292017 -210964566 - MER2 DNA MER2_type -266 79 1 317 289 41 0 chr2 42292030 42292151 -210964432 + L1ME3A LINE L1 5852 5977 -193 627 306 44 23 chr2 42292277 42292362 -210964221 - L1ME4a LINE L1 -239 5882 5800 13839 140 38 6 chr2 42292362 42294703 -210961880 + Tigger1 DNA MER2_type 2 2418 0 627 306 44 23 chr2 42294703 42295006 -210961577 - L1ME4a LINE L1 -321 5800 5486 465 283 29 29 chr2 42295312 42295485 -210961098 - L1ME4a LINE L1 -1946 4200 4028 1485 255 25 22 chr2 42295487 42295852 -210960731 + MLT1A2 LTR MaLR 1 366 -8 905 284 72 29 chr2 42295918 42296503 -210960080 - L1ME4a LINE L1 -2197 3949 3340 25 0 0 0 chr2 42296533 42296558 -210960025 + AT_rich Low_complexity Low_complexity 1 25 0 672 336 84 35 chr2 42297635 42298087 -210958496 + MLT1K LTR MaLR 2 475 -113 314 225 160 80 chr2 42298144 42298344 -210958239 + L1M4 LINE L1 4598 4813 -1333 460 289 57 86 chr2 42298470 42298750 -210957833 - LTR33 LTR ERVL -211 310 39 2879 192 49 9 chr2 42300214 42300844 -210955739 - L1MB7 LINE L1 -69 6115 5461 307 347 35 14 chr2 42301118 42301262 -210955321 + MIR SINE MIR 47 193 -69 1548 225 45 74 chr2 42301265 42301701 -210954882 - MLT1D LTR MaLR -4 501 81 1938 121 73 48 chr2 42301701 42302056 -210954527 - THE1B LTR MaLR 0 364 1 1548 225 45 74 chr2 42302056 42302135 -210954448 - MLT1D LTR MaLR -424 81 1 240 228 35 0 chr2 42304460 42304517 -210952066 - L1MC4 LINE L1 -142 7900 7842 2372 258 91 45 chr2 42304519 42305701 -210950882 - L1MC4a LINE L1 -117 7691 6510 23 0 0 0 chr2 42305736 42305759 -210950824 + AT_rich Low_complexity Low_complexity 1 23 0 3547 220 60 66 chr2 42305776 42306159 -210950424 - L1MB7 LINE L1 -18 6166 5782 342 0 0 0 chr2 42306159 42306197 -210950386 + (TA)n Simple_repeat Simple_repeat 1 38 0 3547 220 60 66 chr2 42306197 42307681 -210948902 - L1MB7 LINE L1 -402 5782 4329 856 118 0 0 chr2 42307681 42307817 -210948766 - L1MA5 LINE L1 -2 6298 6163 3547 220 60 66 chr2 42307817 42307921 -210948662 - L1MB7 LINE L1 -1855 4329 4226 1015 120 0 0 chr2 42308053 42308203 -210948380 - FRAM SINE Alu -7 169 20 24 32 0 0 chr2 42308697 42308728 -210947855 + AT_rich Low_complexity Low_complexity 1 31 0 4515 137 12 3 chr2 42309293 42310025 -210946558 + L1MA2 LINE L1 5521 6259 -45 495 120 0 0 chr2 42310025 42310100 -210946483 + AluS SINE Alu 231 305 -5 28 29 0 0 chr2 42310174 42310209 -210946374 + AT_rich Low_complexity Low_complexity 1 35 0 361 312 23 46 chr2 42310543 42310716 -210945867 - L1MC4a LINE L1 -1962 5846 5678 368 320 137 17 chr2 42310969 42311144 -210945439 - MIR SINE MIR -11 251 56 655 142 9 0 chr2 42311491 42311597 -210944986 + THE1B LTR MaLR 258 364 0 30 27 0 0 chr2 42311747 42311784 -210944799 + AT_rich Low_complexity Low_complexity 1 37 0 977 145 27 32 chr2 42311786 42311972 -210944611 - L1MA1 LINE L1 -8 6294 6110 29 60 0 0 chr2 42313536 42313586 -210942997 + AT_rich Low_complexity Low_complexity 1 50 0 278 298 0 0 chr2 42315633 42315717 -210940866 - L1MC4 LINE L1 -1345 6697 6614 450 274 51 40 chr2 42316836 42317011 -210939572 - MER5B DNA MER1_type 0 178 2 865 124 16 163 chr2 42317491 42317748 -210938835 + L1MA10 LINE L1 6106 6324 -10 249 220 140 60 chr2 42317813 42317913 -210938670 + MIR SINE MIR 42 149 -113 353 290 67 67 chr2 42317977 42318246 -210938337 + L1ME4a LINE L1 5617 5885 -236 233 237 68 76 chr2 42318500 42318618 -210937965 + L1ME4a LINE L1 6003 6119 -2 282 164 0 0 chr2 42318643 42318698 -210937885 + (TA)n Simple_repeat Simple_repeat 1 55 0 287 338 23 44 chr2 42319723 42319907 -210936676 + MER5A DNA MER1_type 5 188 -1 377 278 104 0 chr2 42320888 42321003 -210935580 + MIR SINE MIR 126 252 -10 260 283 86 46 chr2 42322895 42323047 -210933536 - L2 LINE L2 0 3313 3156 218 168 42 42 chr2 42323124 42323219 -210933364 + (TTATA)n Simple_repeat Simple_repeat 3 97 0 1805 182 55 3 chr2 42323433 42323780 -210932803 + MLT1A1 LTR MaLR 1 365 0 417 313 17 68 chr2 42324195 42324371 -210932212 + MER91B DNA MER1_type 20 186 -4 201 194 60 0 chr2 42324535 42324553 -210932030 + A-rich Low_complexity Low_complexity 3 18 -55 2137 111 3 0 chr2 42324553 42324841 -210931742 + AluSx SINE Alu 1 289 -23 201 194 60 0 chr2 42324841 42324889 -210931694 + A-rich Low_complexity Low_complexity 18 73 0 525 280 103 73 chr2 42325845 42326631 -210929952 - L2 LINE L2 -198 3115 2201 21 36 0 0 chr2 42326774 42326802 -210929781 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr2 42326967 42326995 -210929588 + AT_rich Low_complexity Low_complexity 1 28 0 199 294 10 39 chr2 42327157 42327259 -210929324 + L2 LINE L2 1732 1830 -1484 460 305 111 11 chr2 42328282 42328472 -210928111 - MIR SINE MIR -43 219 11 1963 149 3 0 chr2 42330442 42330738 -210925845 + AluSp SINE Alu 1 297 -16 5254 189 9 3 chr2 42330755 42331699 -210924884 - MSTB-int LTR MaLR -701 950 1 2171 185 37 0 chr2 42331699 42332109 -210924474 - MSTB LTR MaLR 0 426 2 457 179 0 0 chr2 42332189 42332267 -210924316 - AluJ/FLAM SINE Alu -234 78 1 342 209 100 33 chr2 42332360 42332570 -210924013 - L1M4 LINE L1 -3084 3062 2839 514 114 13 0 chr2 42332949 42333028 -210923555 - MADE1 DNA Mariner 0 80 1 1507 206 63 15 chr2 42334893 42335228 -210921355 - MLT1A1 LTR MaLR 0 365 15 2016 188 43 10 chr2 42335268 42335682 -210920901 - MSTA LTR MaLR 0 428 1 420 243 221 7 chr2 42335789 42335929 -210920654 + MIR SINE MIR 76 245 -17 1674 146 52 45 chr2 42336596 42336905 -210919678 - AluJb SINE Alu -1 311 1 1974 100 3 44 chr2 42338136 42338455 -210918128 - L1MA1 LINE L1 0 6302 5997 231 219 0 0 chr2 42340349 42340390 -210916193 + L2 LINE L2 3263 3303 -10 251 235 94 35 chr2 42340768 42340853 -210915730 + L2 LINE L2 3222 3311 -2 377 315 51 19 chr2 42341705 42341962 -210914621 + L1ME LINE L1 5479 5743 -378 25 0 0 0 chr2 42341980 42342005 -210914578 + AT_rich Low_complexity Low_complexity 1 25 0 1040 295 32 32 chr2 42342286 42342978 -210913605 + L1ME1 LINE L1 2646 3337 -2809 * 2210 241 119 27 chr2 42342977 42344515 -210912068 + L1ME1 LINE L1 4490 6159 -7 698 282 75 31 chr2 42344575 42345277 -210911306 + L1ME3A LINE L1 4733 5654 -516 318 339 48 43 chr2 42345279 42345465 -210911118 - MER63A DNA MER1_type -2 208 22 601 251 104 86 chr2 42345465 42345909 -210910674 + L1ME3A LINE L1 5668 6119 -2 674 253 18 0 chr2 42345940 42346110 -210910473 - L1ME3A LINE L1 -331 5839 5667 504 269 32 19 chr2 42346214 42346370 -210910213 + MIR SINE MIR 33 190 -72 204 203 34 0 chr2 42347246 42347305 -210909278 + T-rich Low_complexity Low_complexity 4 64 0 1705 193 65 3 chr2 42347387 42347771 -210908812 + L1MB4 LINE L1 5486 5893 -287 492 298 34 11 chr2 42347970 42348148 -210908435 + MIR SINE MIR 3 184 -78 242 194 16 0 chr2 42348150 42348212 -210908371 + (TA)n Simple_repeat Simple_repeat 2 64 0 532 327 42 12 chr2 42348528 42348879 -210907704 - L1ME LINE L1 -403 5767 5401 685 99 45 9 chr2 42350238 42350349 -210906234 - L1PA15 LINE L1 0 6165 6051 401 117 0 0 chr2 42351303 42351363 -210905220 - Alu SINE Alu 0 302 243 30 27 0 0 chr2 42351628 42351665 -210904918 + AT_rich Low_complexity Low_complexity 1 37 0 1209 217 74 19 chr2 42352304 42352627 -210903956 - MER2 DNA MER2_type 0 345 5 449 159 0 25 chr2 42353115 42353278 -210903305 + (TA)n Simple_repeat Simple_repeat 1 159 0 1891 155 3 0 chr2 42353497 42353793 -210902790 + AluSx SINE Alu 2 298 -14 313 304 76 8 chr2 42354207 42354395 -210902188 - L1ME3A LINE L1 -637 5541 5343 1553 202 3 10 chr2 42354473 42354775 -210901808 - AluJo SINE Alu -8 304 5 261 290 50 0 chr2 42354924 42355024 -210901559 - L1MEd LINE L1 -5041 1078 974 22 0 0 0 chr2 42355041 42355063 -210901520 + AT_rich Low_complexity Low_complexity 1 22 0 327 261 54 69 chr2 42355292 42355422 -210901161 - L1ME3A LINE L1 -1 6169 6042 1843 226 60 45 chr2 42357390 42357922 -210898661 + MLT1E2 LTR MaLR 63 602 -24 26 0 0 0 chr2 42359681 42359707 -210896876 + AT_rich Low_complexity Low_complexity 1 26 0 193 356 68 0 chr2 42360855 42360914 -210895669 - L2 LINE L2 -74 3198 3136 766 303 37 8 chr2 42361720 42361961 -210894622 + MIR SINE MIR 15 262 0 494 291 0 0 chr2 42362299 42362433 -210894150 + L2 LINE L2 1864 1997 -1317 216 328 89 62 chr2 42362463 42362832 -210893751 - L3 LINE CR1 -105 1472 1094 243 379 33 13 chr2 42364053 42364206 -210892377 + L3 LINE CR1 1421 1576 -1 943 299 163 55 chr2 42364431 42364799 -210891784 - L1M4 LINE L1 -1911 4235 3908 1455 219 28 14 chr2 42364799 42365082 -210891501 - AluJo SINE Alu -21 291 5 943 299 163 55 chr2 42365082 42366042 -210890541 - L1M4 LINE L1 -2238 3908 2763 2223 85 0 23 chr2 42366151 42366458 -210890125 + AluSg SINE Alu 1 300 -10 594 323 94 52 chr2 42368381 42368883 -210887700 + L2 LINE L2 1234 1756 -1558 343 344 51 28 chr2 42369330 42369545 -210887038 + L2 LINE L2 1753 1972 -1342 943 287 32 56 chr2 42369640 42370072 -210886511 + L2 LINE L2 1892 2313 -1001 405 313 8 15 chr2 42370049 42370180 -210886403 + L2 LINE L2 3182 3311 -2 * 393 75 0 0 chr2 42370414 42370467 -210886116 + (TG)n Simple_repeat Simple_repeat 2 54 0 21 36 0 0 chr2 42371001 42371029 -210885554 + AT_rich Low_complexity Low_complexity 1 28 0 38 81 0 0 chr2 42371070 42371157 -210885426 + AT_rich Low_complexity Low_complexity 1 87 0 4889 164 51 1 chr2 42371399 42372416 -210884167 + L1PA15 LINE L1 5103 6158 -7 1451 199 3 34 chr2 42372497 42372793 -210883790 + AluJo SINE Alu 5 291 -21 296 336 72 16 chr2 42372911 42373036 -210883547 + MIR3 SINE MIR 38 169 -39 24 85 0 0 chr2 42376189 42376248 -210880335 + AT_rich Low_complexity Low_complexity 1 59 0 400 270 40 20 chr2 42377160 42377308 -210879275 + HAL1 LINE L1 2 152 -2355 541 158 20 20 chr2 42377310 42377411 -210879172 + FRAM SINE Alu 66 166 -10 295 338 112 44 chr2 42377431 42377816 -210878767 + HAL1 LINE L1 186 596 -1911 1638 201 23 51 chr2 42377832 42378225 -210878358 + MLT1B LTR MaLR 9 390 0 219 384 151 0 chr2 42378706 42378852 -210877731 - MIR3 SINE MIR -1 207 40 1717 199 73 25 chr2 42379142 42379550 -210877033 + MSTA LTR MaLR 1 428 0 390 91 0 0 chr2 42380246 42380301 -210876282 + (TG)n Simple_repeat Simple_repeat 2 56 0 2032 157 6 0 chr2 42380390 42380746 -210875837 + L1PA16 LINE L1 5805 6162 -4 241 280 180 10 chr2 42381245 42381345 -210875238 + MIR SINE MIR 7 123 -139 1982 120 43 0 chr2 42381417 42381716 -210874867 + AluSx SINE Alu 1 312 0 541 303 43 97 chr2 42381778 42382221 -210874362 - L2 LINE L2 -592 2722 2304 23 0 0 0 chr2 42382388 42382411 -210874172 + AT_rich Low_complexity Low_complexity 1 23 0 336 299 35 33 chr2 42382759 42382957 -210873626 - MIR SINE MIR -27 235 43 245 188 0 31 chr2 42383190 42383254 -210873329 - LTR66 LTR ERVL -175 435 374 413 291 151 11 chr2 42383258 42383529 -210873054 - L2 LINE L2 -38 3275 2967 749 214 83 18 chr2 42383530 42383698 -210872885 - MER5A DNA MER1_type -8 181 3 796 313 138 3 chr2 42383808 42384134 -210872449 - L2 LINE L2 -502 2812 2443 22 0 0 0 chr2 42384200 42384222 -210872361 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 42385127 42385180 -210871403 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr2 42385315 42385337 -210871246 + AT_rich Low_complexity Low_complexity 1 22 0 229 340 133 0 chr2 42386067 42386217 -210870366 + MIR SINE MIR 74 243 -19 220 371 113 0 chr2 42386832 42386956 -210869627 + L2 LINE L2 3134 3271 -1 22 35 0 0 chr2 42387926 42387955 -210868628 + AT_rich Low_complexity Low_complexity 1 29 0 26 50 0 0 chr2 42388593 42388633 -210867950 + AT_rich Low_complexity Low_complexity 1 40 0 387 41 0 0 chr2 42389961 42390010 -210866573 + (TG)n Simple_repeat Simple_repeat 1 49 0 395 78 16 0 chr2 42390012 42390076 -210866507 + (GA)n Simple_repeat Simple_repeat 2 66 0 41 0 0 0 chr2 42391052 42391093 -210865490 + AT_rich Low_complexity Low_complexity 1 41 0 194 372 70 12 chr2 42391679 42391765 -210864818 + L2 LINE L2 3139 3229 -43 22 0 0 0 chr2 42392332 42392354 -210864229 + AT_rich Low_complexity Low_complexity 1 22 0 25 75 0 0 chr2 42392507 42392560 -210864023 + AT_rich Low_complexity Low_complexity 1 53 0 1835 79 254 211 chr2 42392840 42393400 -210863183 + LTR12 LTR ERV1 1 584 -130 15031 148 29 26 chr2 42393419 42396583 -210860000 + HERV30 LTR ERV1 42 3228 -5029 6342 96 2 8 chr2 42396590 42397470 -210859113 + HERV30 LTR ERV1 4080 4954 -3445 1342 145 22 42 chr2 42397463 42397911 -210858672 + HERV17 LTR ERV1 706 1219 -5677 * 918 90 0 0 chr2 42397908 42398042 -210858541 + HERV17 LTR ERV1 1592 1725 -5171 * 4494 108 3 0 chr2 42398032 42398673 -210857910 + HERV17 LTR ERV1 7757 8399 0 234 180 0 40 chr2 42398673 42398723 -210857860 + LTR30 LTR ERV1 1 48 -674 2007 71 227 178 chr2 42398723 42399229 -210857354 + LTR12 LTR ERV1 51 581 -133 281 331 33 33 chr2 42399571 42400052 -210856531 + L1M4 LINE L1 3007 3487 -2659 278 352 42 46 chr2 42400311 42400527 -210856056 - L1MEd LINE L1 -5566 553 339 713 265 39 20 chr2 42400573 42400777 -210855806 - MER63A DNA MER1_type 0 210 3 706 325 66 39 chr2 42400784 42401267 -210855316 - L1MEd LINE L1 -5619 500 5 300 353 58 17 chr2 42401633 42401806 -210854777 - L1ME LINE L1 -309 5812 5633 5720 85 0 3 chr2 42401972 42402736 -210853847 - L1PA7 LINE L1 0 6154 5393 * 20621 102 8 2 chr2 42402732 42405789 -210850794 + L1PA7 LINE L1 2321 5396 -750 223 353 0 35 chr2 42406388 42406504 -210850079 - MER5A DNA MER1_type -66 123 12 1109 308 104 10 chr2 42406990 42407490 -210849093 - MLT1H LTR MaLR -2 547 1 23 33 0 0 chr2 42409147 42409177 -210847406 + AT_rich Low_complexity Low_complexity 1 30 0 2351 161 24 28 chr2 42409842 42410302 -210846281 - L1PB4 LINE L1 -3 6153 5696 540 318 53 0 chr2 42410379 42410549 -210846034 + MIR SINE MIR 78 256 -6 226 336 43 43 chr2 42410719 42410835 -210845748 - L2 LINE L2 -13 3259 3144 214 306 28 0 chr2 42411915 42411987 -210844596 - MER5B DNA MER1_type -7 171 98 1735 133 29 45 chr2 42412146 42412455 -210844128 + AluSq SINE Alu 10 313 0 212 224 104 80 chr2 42412620 42412745 -210843838 - L2 LINE L2 -36 3277 3150 13884 41 10 0 chr2 42412919 42415394 -210841189 + L1PA4 LINE L1 3666 6150 -5 195 313 50 30 chr2 42415612 42415711 -210840872 - MER5A DNA MER1_type -1 188 88 23 54 0 0 chr2 42415945 42415982 -210840601 + AT_rich Low_complexity Low_complexity 1 37 0 3183 81 9 9 chr2 42416306 42416748 -210839835 - L1PA7 LINE L1 -5 6149 5708 1389 192 3 54 chr2 42416840 42417137 -210839446 + AluJo SINE Alu 1 282 -30 473 113 0 12 chr2 42417141 42417221 -210839362 + L1PA13 LINE L1 6084 6162 -1 307 0 23 23 chr2 42417437 42417481 -210839102 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 411 68 0 0 chr2 42417480 42417539 -210839044 + (CA)n Simple_repeat Simple_repeat 1 59 0 965 190 92 35 chr2 42418159 42418474 -210838109 - MER33 DNA MER1_type -4 320 1 193 353 35 0 chr2 42418626 42418711 -210837872 - L2 LINE L2 0 3272 3185 371 301 93 21 chr2 42419384 42419673 -210836910 + L1ME4a LINE L1 5561 5870 -251 * 1685 261 102 33 chr2 42419672 42420608 -210835975 - L1ME3A LINE L1 0 6170 5174 2207 281 88 69 chr2 42420835 42422039 -210834544 - L2 LINE L2 -39 3274 2026 1998 152 0 7 chr2 42422039 42422349 -210834234 + AluSg SINE Alu 1 308 -2 2207 281 88 69 chr2 42422349 42422664 -210833919 - L2 LINE L2 -1287 2026 1719 1680 80 0 0 chr2 42423392 42423616 -210832967 + L1PB1 LINE L1 5928 6151 0 29 28 0 0 chr2 42423733 42423769 -210832814 + AT_rich Low_complexity Low_complexity 1 36 0 544 231 32 54 chr2 42424577 42424763 -210831820 - L2 LINE L2 -7 3306 3125 738 301 81 59 chr2 42425457 42426015 -210830568 - MLT1G LTR MaLR -1 589 20 598 341 65 21 chr2 42426013 42426353 -210830230 + MLT1I LTR MaLR 55 409 0 * 458 357 63 12 chr2 42427230 42427482 -210829101 - L3 LINE CR1 -1 1576 1312 276 298 1 37 chr2 42427618 42427743 -210828840 - L1ME3A LINE L1 -75 6087 5968 761 283 154 17 chr2 42427843 42428252 -210828331 - L1ME3A LINE L1 -214 5948 5483 25 0 0 0 chr2 42428276 42428301 -210828282 + AT_rich Low_complexity Low_complexity 1 25 0 6381 81 14 1 chr2 42428361 42429748 -210826835 - L1PA7 LINE L1 -15 6139 4740 16741 135 138 96 chr2 42429752 42430832 -210825751 - L1PA7 LINE L1 -1769 4377 3344 2196 81 0 11 chr2 42430832 42431147 -210825436 - AluY SINE Alu 0 312 1 16741 135 138 96 chr2 42431147 42434256 -210822327 - L1PA7 LINE L1 -2802 3344 12 33 56 0 0 chr2 42434360 42434414 -210822169 + AT_rich Low_complexity Low_complexity 1 54 0 319 345 20 14 chr2 42434523 42434671 -210821912 - L3 LINE CR1 -469 1108 960 775 76 0 0 chr2 42435759 42435864 -210820719 - L1PA4 LINE L1 -58 6097 5993 218 54 0 27 chr2 42435880 42435917 -210820666 + (TAAAA)n Simple_repeat Simple_repeat 4 39 0 1997 306 28 38 chr2 42436379 42437461 -210819122 - L2 LINE L2 0 3313 2237 1650 246 62 55 chr2 42437803 42438353 -210818230 + MLT2B3 LTR ERVL 1 554 0 180 294 39 0 chr2 42438617 42438668 -210817915 - L3 LINE CR1 -1 1576 1524 274 384 40 8 chr2 42439185 42439310 -210817273 + MIR3 SINE MIR 57 185 -23 1526 187 72 47 chr2 42439311 42439847 -210816736 + MER67C LTR ERV1 1 514 0 842 294 80 53 chr2 42440618 42441612 -210814971 + HAL1 LINE L1 769 1820 -687 355 248 100 43 chr2 42441653 42441883 -210814700 + HAL1b LINE L1 691 933 -415 832 153 25 0 chr2 42442150 42442313 -210814270 + GA-rich Low_complexity Low_complexity 2 168 0 559 363 53 44 chr2 42442909 42443731 -210812852 - MERVL LTR ERVL -1219 4266 3437 260 255 31 20 chr2 42444088 42444186 -210812397 + (TTTA)n Simple_repeat Simple_repeat 4 102 0 1969 147 40 6 chr2 42445029 42445355 -210811228 + MER1B DNA MER1_type 1 337 0 181 285 300 8 chr2 42447290 42447420 -210809163 + MER5A DNA MER1_type 6 173 -16 26 30 0 0 chr2 42447622 42447655 -210808928 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr2 42448142 42448167 -210808416 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr2 42448629 42448676 -210807907 + AT_rich Low_complexity Low_complexity 1 47 0 244 263 23 23 chr2 42448913 42449088 -210807495 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 259 230 46 35 chr2 42448978 42449152 -210807431 + (TTATA)n Simple_repeat Simple_repeat 2 177 0 195 186 14 29 chr2 42449508 42449578 -210807005 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 389 332 68 24 chr2 42449792 42449997 -210806586 - L1ME3A LINE L1 -213 6026 5813 494 304 91 38 chr2 42450112 42450563 -210806020 - L1ME3A LINE L1 -2196 4019 3545 1689 187 40 75 chr2 42450678 42451106 -210805477 - MLT2C2 LTR ERVL -48 416 4 2212 75 4 0 chr2 42451106 42451387 -210805196 + AluY SINE Alu 27 308 -3 331 231 110 35 chr2 42451510 42451800 -210804783 - L1ME3A LINE L1 -2913 3302 2991 198 150 25 0 chr2 42452019 42452059 -210804524 - L2 LINE L2 -5 3308 3268 222 143 0 0 chr2 42452179 42452228 -210804355 + (TG)n Simple_repeat Simple_repeat 2 50 0 335 248 0 30 chr2 42452600 42452622 -210803961 - L1MA10 LINE L1 -66 6268 6247 905 238 54 66 chr2 42452622 42452926 -210803657 - L1ME1 LINE L1 -79 6087 5788 1051 194 138 67 chr2 42452926 42453267 -210803316 + MLT1A1 LTR MaLR 1 365 0 905 238 54 66 chr2 42453267 42453386 -210803197 - L1ME1 LINE L1 -378 5788 5669 451 240 120 17 chr2 42453523 42453698 -210802885 - L1ME3A LINE L1 -5534 862 670 796 277 97 26 chr2 42453710 42454020 -210802563 - L1ME3A LINE L1 -5822 574 243 304 311 44 0 chr2 42454021 42454111 -210802472 - L1ME3A LINE L1 -6211 185 92 26 0 0 0 chr2 42454734 42454760 -210801823 + AT_rich Low_complexity Low_complexity 1 26 0 791 235 36 5 chr2 42455187 42455383 -210801200 - MER3 DNA MER1_type 0 209 8 657 146 81 65 chr2 42456302 42456487 -210800096 - MER53 DNA DNA 0 189 2 1730 215 11 6 chr2 42456729 42457092 -210799491 + MLT1A1 LTR MaLR 1 365 0 592 326 16 52 chr2 42458587 42458952 -210797631 - MLT1J LTR MaLR 0 511 160 572 206 108 77 chr2 42459203 42459285 -210797298 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42459285 42459719 -210796864 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42459719 42459830 -210796753 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42459876 42459900 -210796683 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42459993 42460057 -210796526 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42462509 42462686 -210793897 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42462895 42462955 -210793628 + (TA)n Simple_repeat Simple_repeat 2 60 0 266 164 0 16 chr2 42463195 42463256 -210793327 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42463261 42463509 -210793074 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42464857 42465064 -210791519 - L1MEc LINE L1 -4868 1528 1313 396 103 0 0 chr2 42465204 42465262 -210791321 + (TA)n Simple_repeat Simple_repeat 1 58 0 1037 233 97 50 chr2 42465542 42465946 -210790637 + MLT1C LTR MaLR 45 467 0 387 269 108 93 chr2 42465989 42466268 -210790315 - L1MEc LINE L1 -5397 808 526 496 300 0 0 chr2 42466691 42466831 -210789752 + L1MD2 LINE L1 6202 6341 -18 21 36 0 0 chr2 42466833 42466861 -210789722 + AT_rich Low_complexity Low_complexity 1 28 0 1494 140 34 82 chr2 42467010 42467506 -210789077 + MER51A LTR ERV1 2 634 0 422 315 106 0 chr2 42467538 42467773 -210788810 - MLT1J LTR MaLR -249 262 3 866 106 0 0 chr2 42469155 42469268 -210787315 + AluSq/x SINE Alu 3 115 -197 617 72 0 21 chr2 42469269 42469366 -210787217 + AluY SINE Alu 215 309 -2 1412 115 0 0 chr2 42469366 42469566 -210787017 + AluSx SINE Alu 104 303 -9 22 0 0 0 chr2 42470508 42470530 -210786053 + AT_rich Low_complexity Low_complexity 1 22 0 440 184 35 71 chr2 42471771 42471856 -210784727 + L1MC4 LINE L1 7902 7982 -60 2770 16 0 9 chr2 42471856 42472177 -210784406 - AluYb8 SINE Alu 0 318 1 440 184 35 71 chr2 42472177 42472232 -210784351 + L1MC4 LINE L1 7982 8037 -5 274 339 69 39 chr2 42472295 42472425 -210784158 - MIR3 SINE MIR -72 136 3 263 321 75 0 chr2 42472455 42472589 -210783994 - MIR SINE MIR -109 153 10 435 282 44 103 chr2 42473736 42474144 -210782439 - MLT1J LTR MaLR -32 479 96 719 306 73 53 chr2 42474849 42475247 -210781336 + L2 LINE L2 2907 3312 -1 21 57 0 0 chr2 42476340 42476375 -210780208 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr2 42477034 42477057 -210779526 + (T)n Simple_repeat Simple_repeat 1 23 0 797 82 16 55 chr2 42477247 42477430 -210779153 + (TTTC)n Simple_repeat Simple_repeat 4 179 0 376 152 0 33 chr2 42477439 42477531 -210779052 + CT-rich Low_complexity Low_complexity 3 91 0 1240 185 100 4 chr2 42477531 42477780 -210778803 - AluSx SINE Alu -39 273 1 329 266 76 21 chr2 42477851 42478140 -210778443 - L1ME4a LINE L1 -3 6118 5766 1791 96 16 4 chr2 42479010 42479260 -210777323 + L1PA7 LINE L1 5887 6139 -15 218 254 183 0 chr2 42480682 42480753 -210775830 + L2 LINE L2 3178 3261 -11 213 65 0 0 chr2 42480784 42480815 -210775768 + (CA)n Simple_repeat Simple_repeat 1 31 0 656 225 147 28 chr2 42482000 42482320 -210774263 - L1ME4a LINE L1 -832 5314 4957 400 291 48 39 chr2 42482325 42482588 -210773995 - L1ME4a LINE L1 -1894 4252 3975 1711 160 103 3 chr2 42484443 42484774 -210771809 - THE1B LTR MaLR 0 364 1 288 53 0 0 chr2 42484875 42484913 -210771670 + (TG)n Simple_repeat Simple_repeat 2 39 0 2621 116 62 10 chr2 42486856 42487260 -210769323 + MER83 LTR ERV1 1 425 -23 569 258 122 18 chr2 42489510 42489731 -210766852 - MER112 DNA MER1_type -13 247 4 192 229 29 43 chr2 42489761 42489831 -210766752 - L2 LINE L2 -939 2375 2307 3634 177 81 25 chr2 42489940 42491341 -210765242 - L1MA7 LINE L1 0 6291 4686 662 301 61 9 chr2 42492006 42492219 -210764364 - MIR SINE MIR -26 236 13 467 120 0 13 chr2 42492300 42492375 -210764208 - MADE1 DNA Mariner -5 75 2 2217 104 48 22 chr2 42492517 42492872 -210763711 + THE1B LTR MaLR 1 364 0 21 0 0 0 chr2 42493022 42493043 -210763540 + AT_rich Low_complexity Low_complexity 1 21 0 190 286 0 0 chr2 42493161 42493203 -210763380 + MIR SINE MIR 119 160 -102 431 315 150 9 chr2 42494689 42494902 -210761681 + MIR SINE MIR 6 248 -14 27 73 0 0 chr2 42495276 42495331 -210761252 + AT_rich Low_complexity Low_complexity 1 55 0 206 291 82 73 chr2 42495413 42495523 -210761060 + MIR SINE MIR 34 144 -118 275 286 14 0 chr2 42495591 42495661 -210760922 - L2 LINE L2 -4 3268 3198 2278 283 68 38 chr2 42495846 42497290 -210759293 + L1M4c LINE L1 1060 2561 -3821 8066 155 48 46 chr2 42497292 42498902 -210757681 - Tigger1 DNA MER2_type -804 1614 2 414 0 0 0 chr2 42498931 42498977 -210757606 + (CA)n Simple_repeat Simple_repeat 2 47 0 1863 202 24 30 chr2 42498978 42499443 -210757140 + L1MA6 LINE L1 5832 6293 -7 2242 225 77 25 chr2 42499453 42500288 -210756295 + L1M4c LINE L1 3008 3885 -2497 584 179 66 46 chr2 42500281 42500432 -210756151 + L1M4c LINE L1 4260 4413 -1969 * 3870 194 34 17 chr2 42500429 42501229 -210755354 + L1MA9 LINE L1 5353 6170 -142 351 44 0 0 chr2 42501229 42501274 -210755309 + (CA)n Simple_repeat Simple_repeat 1 45 0 3870 194 34 17 chr2 42501274 42501318 -210755265 + L1MA9 LINE L1 6170 6212 -100 32 43 0 0 chr2 42501332 42501378 -210755205 + AT_rich Low_complexity Low_complexity 1 46 0 11365 31 1 0 chr2 42501835 42503974 -210752609 + L1PA3 LINE L1 4028 6169 0 203 0 0 36 chr2 42505434 42505462 -210751121 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1140 179 91 33 chr2 42506471 42506745 -210749838 - AluJo SINE Alu -11 301 12 708 173 25 117 chr2 42506859 42507056 -210749527 + MLT1D LTR MaLR 1 179 -326 743 237 118 0 chr2 42507089 42507275 -210749308 + MLT1D LTR MaLR 298 505 0 288 257 7 50 chr2 42507980 42508120 -210748463 + L1ME4a LINE L1 5765 5898 -223 1646 176 95 15 chr2 42508137 42508604 -210747979 - Charlie1b DNA MER1_type -6 517 4 344 268 67 61 chr2 42508778 42508942 -210747641 - MIR SINE MIR -4 258 94 244 274 0 0 chr2 42509060 42509122 -210747461 + (TG)n Simple_repeat Simple_repeat 2 63 0 213 132 0 0 chr2 42509723 42509761 -210746822 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 21 57 0 0 chr2 42510101 42510136 -210746447 + AT_rich Low_complexity Low_complexity 1 35 0 2283 60 0 0 chr2 42510489 42510842 -210745741 + AluY SINE Alu 1 353 0 1901 114 12 2 chr2 42511528 42511840 -210744743 + L1P LINE L1 4948 5260 -886 1275 262 68 46 chr2 42512418 42512872 -210743711 - MLT2B1 LTR ERVL -56 464 1 184 309 29 0 chr2 42514493 42514561 -210742022 + L3 LINE CR1 739 808 -769 221 428 12 6 chr2 42516176 42516342 -210740241 + L3 LINE CR1 946 1112 -465 322 71 0 36 chr2 42516469 42516525 -210740058 + (TA)n Simple_repeat Simple_repeat 2 55 0 892 179 22 0 chr2 42516788 42516967 -210739616 - L1MB3 LINE L1 -10 6173 5991 268 265 146 19 chr2 42517339 42517579 -210739004 - L1MB3 LINE L1 -535 5586 5311 314 326 81 27 chr2 42517598 42517856 -210738727 - L1MB3 LINE L1 -852 5294 5023 5056 134 16 14 chr2 42518204 42519037 -210737546 + Tigger1 DNA MER2_type 1585 2418 0 235 327 100 33 chr2 42519049 42519199 -210737384 - MIR SINE MIR -41 221 62 374 0 22 0 chr2 42519582 42519628 -210736955 + (TA)n Simple_repeat Simple_repeat 1 47 0 2216 101 3 7 chr2 42519906 42520213 -210736370 - AluSx SINE Alu -6 306 1 2031 123 6 63 chr2 42520947 42521531 -210735052 + MER51A LTR ERV1 1 633 -1 930 129 18 6 chr2 42521698 42521861 -210734722 - L1MB2 LINE L1 -3 6168 6004 2575 52 3 0 chr2 42522141 42522450 -210734133 - AluY SINE Alu -1 310 1 713 318 90 50 chr2 42522453 42524331 -210732252 - L1M4 LINE L1 -841 5305 3352 * 1339 282 99 36 chr2 42524286 42524794 -210731789 + L1ME3 LINE L1 4559 5033 -1129 770 167 0 6 chr2 42524794 42524950 -210731633 - L1MA4 LINE L1 -1 6299 6145 1339 282 99 36 chr2 42524950 42525887 -210730696 + L1ME3 LINE L1 5033 6129 -33 435 310 16 75 chr2 42526499 42526754 -210729829 - MLT1J LTR MaLR -112 399 160 572 206 108 77 chr2 42527005 42527087 -210729496 - MIR SINE MIR -21 241 163 2401 157 18 21 chr2 42527087 42527521 -210729062 + Tigger2a DNA MER2_type 2 434 0 572 206 108 77 chr2 42527521 42527632 -210728951 - MIR SINE MIR -99 163 42 24 0 0 0 chr2 42527678 42527702 -210728881 + AT_rich Low_complexity Low_complexity 1 24 0 230 188 156 0 chr2 42527795 42527859 -210728724 - L2 LINE L2 -550 2764 2691 443 362 11 0 chr2 42530310 42530487 -210726096 - ERVL LTR ERVL -4078 1686 1508 263 133 0 17 chr2 42530696 42530756 -210725827 + (TA)n Simple_repeat Simple_repeat 2 60 0 266 164 0 16 chr2 42530996 42531057 -210725526 + (TA)n Simple_repeat Simple_repeat 2 61 0 849 218 32 48 chr2 42531062 42531310 -210725273 - MLT1I LTR MaLR -90 319 76 286 314 48 5 chr2 42532661 42532868 -210723715 - L1MDa LINE L1 -4868 2270 2055 216 0 0 0 chr2 42533008 42533032 -210723551 + (TA)n Simple_repeat Simple_repeat 1 24 0 3248 258 40 15 chr2 42533141 42534506 -210722077 - L1MDa LINE L1 -2751 4206 2801 624 248 32 6 chr2 42534516 42534673 -210721910 - L1MDa LINE L1 -6538 321 161 314 308 59 18 chr2 42534674 42534843 -210721740 + L1MB7 LINE L1 5709 5884 -300 23 33 0 0 chr2 42534878 42534908 -210721675 + AT_rich Low_complexity Low_complexity 1 30 0 334 266 35 131 chr2 42535171 42535400 -210721183 - L2 LINE L2 0 3313 3107 2078 106 7 0 chr2 42535400 42535700 -210720883 + AluSx SINE Alu 11 312 0 297 214 344 30 chr2 42535756 42535887 -210720696 + MER5A DNA MER1_type 11 182 -7 760 113 16 0 chr2 42536083 42536214 -210720369 - L1PA12 LINE L1 -234 5934 5797 877 57 89 0 chr2 42537014 42537138 -210719445 - MER85 DNA T2_type -3 136 2 703 285 97 13 chr2 42537197 42537425 -210719158 + MIR SINE MIR 16 262 0 210 179 26 0 chr2 42537510 42537549 -210719034 + (CATATA)n Simple_repeat Simple_repeat 3 42 0 227 203 0 68 chr2 42538292 42538366 -210718217 - Charlie8 DNA MER1_type -841 1576 1508 22 35 0 0 chr2 42538514 42538543 -210718040 + AT_rich Low_complexity Low_complexity 1 29 0 1856 186 113 7 chr2 42539437 42539845 -210716738 + MER74C LTR ERVL 1 451 -9 195 308 84 37 chr2 42540345 42540452 -210716131 + MIR SINE MIR 10 121 -141 2531 176 22 56 chr2 42540452 42540985 -210715598 + MLT2B2 LTR ERVL 1 515 0 197 269 45 15 chr2 42541144 42541211 -210715372 + MIR SINE MIR 120 188 -74 199 264 57 0 chr2 42541316 42541369 -210715214 - L2 LINE L2 -7 3306 3251 23 54 0 0 chr2 42541513 42541550 -210715033 + AT_rich Low_complexity Low_complexity 1 37 0 1992 168 35 10 chr2 42541716 42541729 -210714854 - L1MB7 LINE L1 -178 6006 5995 815 93 29 21 chr2 42541729 42541869 -210714714 - L1MB8 LINE L1 0 6178 6038 1992 168 35 10 chr2 42541869 42542259 -210714324 - L1MB7 LINE L1 -189 5995 5593 18303 65 16 3 chr2 42542293 42545544 -210711039 - L1PA6 LINE L1 -11 6143 2884 264 293 13 0 chr2 42546366 42546441 -210710142 + MIR3 SINE MIR 126 201 -7 411 38 0 0 chr2 42547081 42547134 -210709449 + (CA)n Simple_repeat Simple_repeat 2 54 0 338 274 13 105 chr2 42547364 42547517 -210709066 - MIR SINE MIR -73 189 51 23 68 0 0 chr2 42547721 42547765 -210708818 + AT_rich Low_complexity Low_complexity 1 44 0 40 49 0 0 chr2 42547823 42547884 -210708699 + AT_rich Low_complexity Low_complexity 1 61 0 2001 237 36 5 chr2 42547899 42548346 -210708237 + MLT2B2 LTR ERVL 1 461 -54 210 208 0 0 chr2 42548348 42548396 -210708187 + (TG)n Simple_repeat Simple_repeat 2 49 0 238 405 101 35 chr2 42548732 42548959 -210707624 + L2 LINE L2 3031 3272 0 1870 142 29 26 chr2 42549161 42549472 -210707111 + AluSx SINE Alu 1 312 0 225 333 0 24 chr2 42549493 42549577 -210707006 + MLT1J2 LTR MaLR 153 234 -315 251 85 85 68 chr2 42549721 42549780 -210706803 + MLT1J2 LTR MaLR 364 423 -27 830 338 91 51 chr2 42550245 42551062 -210705521 - L2 LINE L2 -299 3014 2166 253 258 0 67 chr2 42551658 42551747 -210704836 + LTR67 LTR ERVL 427 509 -48 279 133 0 0 chr2 42551882 42551927 -210704656 + (TA)n Simple_repeat Simple_repeat 2 46 0 1563 187 53 11 chr2 42551927 42552210 -210704373 - AluJb SINE Alu -17 295 1 4278 216 42 19 chr2 42552395 42552964 -210703619 + L1MD1 LINE L1 4730 5285 -957 2063 106 0 50 chr2 42552964 42553286 -210703297 + AluSp SINE Alu 1 306 -7 4278 216 42 19 chr2 42553286 42554183 -210702400 + L1MD1 LINE L1 5285 6229 -13 297 68 0 0 chr2 42554557 42554601 -210701982 + (TA)n Simple_repeat Simple_repeat 2 45 0 3924 151 9 2 chr2 42554601 42555817 -210700766 - L1P5 LINE L1 -371 5780 4555 254 333 8 24 chr2 42557211 42557337 -210699246 + CT-rich Low_complexity Low_complexity 2 125 0 1590 31 0 0 chr2 42557569 42557795 -210698788 - L1PA4 LINE L1 -703 5452 5227 5992 33 6 0 chr2 42557795 42558513 -210698070 + L1PA4 LINE L1 5420 6147 -8 23 0 0 29 chr2 42558513 42558535 -210698048 + AT_rich Low_complexity Low_complexity 1 23 -10 482 212 18 0 chr2 42558535 42558648 -210697935 + L1MD1 LINE L1 6128 6242 0 23 0 0 29 chr2 42558648 42558659 -210697924 + AT_rich Low_complexity Low_complexity 23 33 0 2201 74 17 24 chr2 42558672 42558968 -210697615 + AluSc SINE Alu 1 294 -15 561 294 65 45 chr2 42559241 42559486 -210697097 - MIR SINE MIR 0 262 13 354 23 0 0 chr2 42561078 42561121 -210695462 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr2 42561281 42561303 -210695280 + AT_rich Low_complexity Low_complexity 1 22 0 1889 134 7 20 chr2 42561901 42562207 -210694376 - AluSx SINE Alu -10 302 1 626 180 56 0 chr2 42562356 42562491 -210694092 + MIR SINE MIR 98 240 -22 218 309 0 0 chr2 42562506 42562561 -210694022 - MER91B DNA MER1_type -135 55 1 315 297 30 10 chr2 42562584 42562685 -210693898 - MIR SINE MIR -111 151 49 346 382 58 14 chr2 42564286 42564493 -210692090 + MIR SINE MIR 28 243 -19 2291 50 46 0 chr2 42564687 42564967 -210691616 - AluY SINE Alu -6 305 13 23 0 0 0 chr2 42565397 42565420 -210691163 + AT_rich Low_complexity Low_complexity 1 23 0 304 306 61 24 chr2 42565479 42565809 -210690774 - L1ME LINE L1 -441 5680 5316 270 194 0 0 chr2 42566735 42566807 -210689776 + (TA)n Simple_repeat Simple_repeat 1 72 0 31 0 0 0 chr2 42568317 42568348 -210688235 + AT_rich Low_complexity Low_complexity 1 31 0 369 250 108 40 chr2 42569008 42569184 -210687399 - MER5A DNA MER1_type -1 188 1 204 392 108 18 chr2 42569365 42569531 -210687052 - MIR3 SINE MIR -11 197 17 335 120 0 0 chr2 42569615 42569665 -210686918 + MADE1 DNA Mariner 1 50 -30 21 0 0 0 chr2 42571182 42571203 -210685380 + AT_rich Low_complexity Low_complexity 1 21 0 611 203 0 38 chr2 42571203 42571336 -210685247 - FLAM_A SINE Alu -9 133 6 207 100 0 0 chr2 42572554 42572584 -210683999 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 1106 273 71 19 chr2 42573778 42574258 -210682325 + L1MDa LINE L1 1366 1870 -4670 567 176 15 7 chr2 42574291 42574427 -210682156 + GA-rich Low_complexity Low_complexity 3 139 0 447 175 48 79 chr2 42574498 42574624 -210681959 + L1MD2 LINE L1 6194 6315 -44 503 266 142 41 chr2 42576429 42576895 -210679688 - HAL1 LINE L1 -15 2492 1980 2555 220 64 9 chr2 42576939 42577802 -210678781 + L1MB7 LINE L1 4969 5873 -311 884 281 68 38 chr2 42577798 42578267 -210678316 - HAL1 LINE L1 -745 1762 1280 * 2206 105 28 25 chr2 42578426 42578787 -210677796 - L1PA13 LINE L1 0 6163 5802 295 73 0 0 chr2 42578787 42578828 -210677755 + L1PA13 LINE L1 5758 5798 -367 949 69 8 15 chr2 42578956 42579086 -210677497 - AluY SINE Alu -17 294 166 181 286 41 0 chr2 42580692 42580741 -210675842 + MIR SINE MIR 91 141 -67 2163 112 7 3 chr2 42581775 42582079 -210674504 + AluSq SINE Alu 1 305 -8 581 281 67 52 chr2 42582185 42582786 -210673797 - L1ME4a LINE L1 -106 6015 5405 706 297 121 7 chr2 42583259 42583549 -210673034 - MLT1K LTR MaLR 0 588 266 443 322 77 36 chr2 42583791 42584196 -210672387 - L1ME4a LINE L1 -1807 4339 3911 373 308 58 46 chr2 42585735 42585975 -210670608 - MIR SINE MIR -12 250 8 323 316 52 29 chr2 42587261 42587397 -210669186 - L2 LINE L2 0 3272 3134 191 355 60 63 chr2 42588189 42588457 -210668126 - L2 LINE L2 -1070 2244 1978 11365 30 2 0 chr2 42588463 42590229 -210666354 - L1P1 LINE L1 -359 5796 4028 180 343 82 45 chr2 42590642 42590776 -210665807 - L2 LINE L2 -337 2977 2839 244 254 0 0 chr2 42591593 42591648 -210664935 + (TA)n Simple_repeat Simple_repeat 1 55 0 1865 99 11 0 chr2 42592871 42593133 -210663450 - AluSq SINE Alu -6 307 43 1193 250 20 36 chr2 42593474 42593918 -210662665 + L1MDb LINE L1 900 1336 -5073 2345 80 0 10 chr2 42594601 42594913 -210661670 + AluY SINE Alu 1 309 -2 734 86 76 0 chr2 42595021 42595126 -210661457 + L1PA7 LINE L1 6034 6146 -8 675 47 0 0 chr2 42595426 42595512 -210661071 - L1MA1 LINE L1 -7 6295 6210 250 218 36 0 chr2 42596094 42596149 -210660434 + MER5A DNA MER1_type 1 57 -132 239 333 0 0 chr2 42596421 42596496 -210660087 - MIR3 SINE MIR -13 195 121 281 294 24 4 chr2 42596509 42596658 -210659925 - MIR SINE MIR -12 250 44 23 0 0 0 chr2 42597469 42597492 -210659091 + AT_rich Low_complexity Low_complexity 1 23 0 4372 160 103 43 chr2 42598336 42599279 -210657304 - L1MC1 LINE L1 -2 6331 5333 27 0 0 0 chr2 42599387 42599414 -210657169 + AT_rich Low_complexity Low_complexity 1 27 0 2050 131 47 33 chr2 42599618 42599977 -210656606 + THE1B LTR MaLR 1 364 0 1633 215 6 36 chr2 42602908 42603380 -210653203 + MER89 LTR ERV1 2 559 0 757 221 138 0 chr2 42604300 42604481 -210652102 + MER6B DNA MER2_type 4 209 -1 354 318 45 62 chr2 42605350 42605526 -210651057 - MIR SINE MIR -71 191 19 24 32 0 0 chr2 42605642 42605673 -210650910 + AT_rich Low_complexity Low_complexity 1 31 0 266 326 0 113 chr2 42605710 42605851 -210650732 + MER5A DNA MER1_type 40 164 -25 243 317 0 12 chr2 42606739 42606821 -210649762 - MIR SINE MIR -129 133 53 1103 185 110 55 chr2 42607603 42607949 -210648634 + MLT1A1 LTR MaLR 1 365 0 353 301 20 0 chr2 42607972 42608118 -210648465 - L1ME3A LINE L1 -220 5950 5802 410 298 96 46 chr2 42608124 42608717 -210647866 - L1ME3A LINE L1 -570 5594 4967 243 0 0 0 chr2 42608815 42608842 -210647741 + (TG)n Simple_repeat Simple_repeat 2 28 0 376 305 47 14 chr2 42608864 42609077 -210647506 - L1ME3A LINE L1 -1356 4790 4571 301 193 0 96 chr2 42609384 42609467 -210647116 + L1MB7 LINE L1 6106 6180 -4 27 29 0 0 chr2 42609467 42609501 -210647082 + AT_rich Low_complexity Low_complexity 1 34 0 1364 190 52 28 chr2 42609502 42609791 -210646792 - AluJb SINE Alu -16 296 1 425 292 146 11 chr2 42611424 42611609 -210644974 + MIR SINE MIR 48 257 -5 3702 203 55 7 chr2 42612161 42613102 -210643481 + L1MB4 LINE L1 5188 6180 0 2604 99 8 6 chr2 42613478 42613841 -210642742 + THE1B LTR MaLR 1 364 0 241 372 54 14 chr2 42614575 42614723 -210641860 + L2 LINE L2 2572 2725 -589 2486 48 0 0 chr2 42614775 42615070 -210641513 + AluY SINE Alu 1 295 -16 256 188 12 129 chr2 42616115 42616151 -210640432 - MLT1-int LTR MaLR -864 507 485 2247 88 0 0 chr2 42616151 42616448 -210640135 - AluY SINE Alu -14 297 1 256 188 12 129 chr2 42616448 42616496 -210640087 - MLT1-int LTR MaLR -886 485 433 1890 162 18 21 chr2 42616496 42616830 -210639753 + MER1B DNA MER1_type 1 333 -6 1081 316 48 45 chr2 42617013 42617530 -210639053 - L2 LINE L2 -292 3021 2505 701 252 14 0 chr2 42617808 42617951 -210638632 + FRAM SINE Alu 2 146 -30 258 148 0 0 chr2 42617955 42618016 -210638567 + L1MA7 LINE L1 6230 6290 -1 9655 183 98 30 chr2 42618842 42620873 -210635710 + L1M2 LINE L1 2 2170 -4679 3870 198 40 1 chr2 42620869 42622095 -210634488 + L1MC1 LINE L1 4735 6010 -323 * 488 114 0 0 chr2 42623134 42623204 -210633379 + MLT2B3 LTR ERVL 1 70 -484 950 207 54 89 chr2 42623308 42623588 -210632995 + MLT2B3 LTR ERVL 67 336 -218 2952 261 69 9 chr2 42623644 42624441 -210632142 + HERVL LTR ERVL 1 845 -4809 814 208 51 115 chr2 42624458 42624848 -210631735 - MLT1A1 LTR MaLR 0 365 1 188 342 142 0 chr2 42624925 42625045 -210631538 - MIR SINE MIR -31 231 95 749 268 50 18 chr2 42626036 42626256 -210630327 - MIR SINE MIR 0 262 36 733 297 121 57 chr2 42626750 42627221 -210629362 - L2 LINE L2 -1 3312 2812 295 286 44 11 chr2 42627481 42627572 -210629011 - MER5A DNA MER1_type -83 106 13 340 320 76 41 chr2 42627701 42628413 -210628170 + L1ME3A LINE L1 4235 4980 -1166 2776 168 6 2 chr2 42628413 42628896 -210627687 + MER31A LTR ERV1 1 485 0 340 320 76 41 chr2 42628896 42628985 -210627598 + L1ME3A LINE L1 4980 5064 -1082 398 310 56 56 chr2 42629100 42629815 -210626768 + L1ME3A LINE L1 5217 5950 -220 231 196 0 0 chr2 42631278 42631324 -210625259 - MLT2D LTR ERVL 0 397 352 261 233 35 0 chr2 42631355 42631441 -210625142 + L1MC4 LINE L1 6614 6702 -1340 * 307 267 0 0 chr2 42631400 42631490 -210625093 - L1MC4 LINE L1 -1339 6703 6614 258 32 0 0 chr2 42631490 42631521 -210625062 + (TA)n Simple_repeat Simple_repeat 2 32 0 1366 188 100 26 chr2 42631524 42631865 -210624718 - MLT2D LTR ERVL -48 366 1 267 292 52 30 chr2 42632913 42633217 -210623366 + L1MDa LINE L1 1510 1872 -4815 * 2057 240 56 38 chr2 42633207 42633500 -210623083 - L1M4 LINE L1 -883 6074 5788 2164 118 3 3 chr2 42633500 42633806 -210622777 - AluSc SINE Alu -3 306 1 2057 240 56 38 chr2 42633806 42634195 -210622388 - L1M4 LINE L1 -1169 5788 5380 1302 254 60 20 chr2 42634228 42634681 -210621902 - L1M4 LINE L1 -2001 4956 4486 5335 264 43 36 chr2 42634790 42634874 -210621709 - L1M4 LINE L1 -4699 2260 2178 2147 126 0 13 chr2 42634874 42635191 -210621392 - AluSq SINE Alu 0 313 1 5335 264 43 36 chr2 42635191 42635802 -210620781 - L1M4 LINE L1 -4781 2178 1573 1464 225 48 19 chr2 42635802 42635914 -210620669 - MLT1B LTR MaLR -1 389 282 1878 138 7 23 chr2 42635914 42636219 -210620364 - AluSc SINE Alu -9 300 1 1464 225 48 19 chr2 42636219 42636484 -210620099 - MLT1B LTR MaLR -108 282 1 5335 264 43 36 chr2 42636484 42638019 -210618564 - L1M4 LINE L1 -5386 1573 10 279 261 42 35 chr2 42638021 42638163 -210618420 + L1ME3A LINE L1 6018 6160 -10 866 20 0 0 chr2 42638176 42638278 -210618305 - L1PA2 LINE L1 -1 6154 6053 327 339 35 0 chr2 42638303 42638418 -210618165 + MIR SINE MIR 79 197 -65 4696 157 85 26 chr2 42638437 42640025 -210616558 - L1MA5A LINE L1 -2 6997 5183 3827 193 51 12 chr2 42640037 42641016 -210615567 - L1PB4 LINE L1 -8 6148 5127 * 9413 210 24 18 chr2 42641002 42643627 -210612956 - L1MA5A LINE L1 -1646 5202 2558 180 97 0 0 chr2 42643929 42643960 -210612623 + (A)n Simple_repeat Simple_repeat 1 31 0 378 282 28 56 chr2 42644428 42644570 -210612013 + L2 LINE L2 3123 3260 -12 536 149 0 11 chr2 42644605 42644692 -210611891 + LTR23 LTR ERV1 320 405 -32 559 382 35 19 chr2 42644883 42645185 -210611398 - L2 LINE L2 -352 2962 2649 1153 235 75 17 chr2 42645185 42645530 -210611053 + MLT1A1 LTR MaLR 1 365 0 559 382 35 19 chr2 42645530 42645659 -210610924 - L2 LINE L2 -665 2649 2524 189 0 0 0 chr2 42645843 42645864 -210610719 + (TA)n Simple_repeat Simple_repeat 2 22 0 1642 215 25 6 chr2 42646408 42646766 -210609817 - MLT1A1 LTR MaLR 0 365 1 189 0 0 0 chr2 42647010 42647031 -210609552 + (TG)n Simple_repeat Simple_repeat 1 21 0 198 171 0 0 chr2 42647289 42647330 -210609253 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 227 324 111 19 chr2 42647554 42647662 -210608921 - L3b LINE CR1 -11 1572 1455 350 164 87 29 chr2 42648187 42648288 -210608295 - MLT1H1 LTR MaLR 0 555 449 1385 226 34 15 chr2 42648288 42648615 -210607968 + MER58B DNA MER1_type 4 336 -5 301 276 120 89 chr2 42648633 42648959 -210607624 - MLT1H1 LTR MaLR -110 439 104 230 239 11 0 chr2 42649490 42649582 -210607001 + (TA)n Simple_repeat Simple_repeat 2 94 0 22 0 0 0 chr2 42651781 42651803 -210604780 + AT_rich Low_complexity Low_complexity 1 22 0 300 261 148 40 chr2 42651859 42652035 -210604548 - L1ME3A LINE L1 -220 5950 5756 403 256 111 26 chr2 42652220 42652506 -210604077 - L1ME3A LINE L1 -662 5502 5192 230 304 144 17 chr2 42652726 42653025 -210603558 - L1ME3A LINE L1 -1299 4847 4511 2434 27 7 0 chr2 42653488 42653785 -210602798 - L1PA3 LINE L1 -574 5581 5283 5093 16 0 0 chr2 42653785 42654364 -210602219 + L1PA3 LINE L1 5574 6154 -1 27 0 0 0 chr2 42654364 42654391 -210602192 + AT_rich Low_complexity Low_complexity 1 27 0 611 263 45 28 chr2 42654502 42654681 -210601902 + LTR16A LTR ERVL 260 441 -9 379 286 143 11 chr2 42654924 42655099 -210601484 + MIR SINE MIR 34 231 -31 1025 297 129 9 chr2 42657009 42657591 -210598992 - L1MC4a LINE L1 -1747 6061 5410 1246 277 70 106 chr2 42657613 42658195 -210598388 - L2 LINE L2 0 3313 2762 1936 141 13 0 chr2 42658195 42658500 -210598083 - AluSx SINE Alu -3 309 1 1246 277 70 106 chr2 42658500 42658849 -210597734 - L2 LINE L2 -551 2762 2402 24 53 0 0 chr2 42658980 42659018 -210597565 + AT_rich Low_complexity Low_complexity 1 38 0 415 292 60 66 chr2 42659157 42660037 -210596546 - L1MC4a LINE L1 -1111 5035 4161 304 289 51 101 chr2 42660406 42660874 -210595709 + L2 LINE L2 2 3309 -4 339 275 54 22 chr2 42660919 42661166 -210595417 - L1M4 LINE L1 -2327 3819 3563 34 0 0 0 chr2 42661379 42661413 -210595170 + AT_rich Low_complexity Low_complexity 1 34 0 261 315 0 0 chr2 42661422 42661495 -210595088 + (TG)n Simple_repeat Simple_repeat 2 74 0 32 57 0 0 chr2 42661630 42661683 -210594900 + AT_rich Low_complexity Low_complexity 1 53 0 239 216 62 41 chr2 42661780 42661877 -210594706 - L1M4 LINE L1 -3129 3017 2919 345 309 43 24 chr2 42662382 42662592 -210593991 - L1M4 LINE L1 -3779 2367 2154 27 0 0 0 chr2 42662661 42662688 -210593895 + AT_rich Low_complexity Low_complexity 1 27 0 772 293 63 6 chr2 42662954 42663272 -210593311 - HAL1b LINE L1 -734 614 279 266 277 20 10 chr2 42663555 42663656 -210592927 - MLT1J2 LTR MaLR -288 162 61 351 245 245 0 chr2 42663664 42663762 -210592821 + FLAM_A SINE Alu 1 122 -11 1389 253 70 66 chr2 42664133 42664722 -210591861 + MLT1E LTR MaLR 2 592 -1 399 266 87 29 chr2 42665531 42665704 -210590879 + MLT1K LTR MaLR 379 561 -27 217 333 57 9 chr2 42665899 42666004 -210590579 + L2 LINE L2 3168 3277 -36 21 36 0 0 chr2 42667564 42667592 -210588991 + AT_rich Low_complexity Low_complexity 1 28 0 189 226 0 0 chr2 42667668 42667721 -210588862 + GA-rich Low_complexity Low_complexity 4 56 0 1425 116 0 5 chr2 42668698 42668897 -210587686 + AluSg/x SINE Alu 100 297 -15 411 335 244 16 chr2 42669202 42669686 -210586897 - L3 LINE CR1 -5 1572 979 24 0 0 0 chr2 42669951 42669975 -210586608 + AT_rich Low_complexity Low_complexity 1 24 0 200 191 43 0 chr2 42670158 42670205 -210586378 + (CATA)n Simple_repeat Simple_repeat 3 51 0 4435 45 21 56 chr2 42670256 42671341 -210585242 + MER11A LTR ERVK 1 1266 0 378 323 86 14 chr2 42671342 42671662 -210584921 + L1ME LINE L1 5265 5572 -590 355 282 120 40 chr2 42672026 42672327 -210584256 + HAL1b LINE L1 314 638 -710 28 0 0 0 chr2 42672774 42672802 -210583781 + AT_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr2 42673566 42673588 -210582995 + (TTA)n Simple_repeat Simple_repeat 2 23 0 404 125 0 0 chr2 42673593 42673649 -210582934 - AluS SINE Alu -26 276 221 22 0 0 0 chr2 42673656 42673678 -210582905 + AT_rich Low_complexity Low_complexity 1 22 0 594 280 145 55 chr2 42674259 42674791 -210581792 + L1 LINE L1 3758 4337 -1809 26 50 0 0 chr2 42674861 42674901 -210581682 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 42674939 42674961 -210581622 + AT_rich Low_complexity Low_complexity 1 22 0 40 59 0 0 chr2 42675069 42675137 -210581446 + AT_rich Low_complexity Low_complexity 1 68 0 960 260 51 13 chr2 42675230 42675622 -210580961 - L1MEc LINE L1 -4110 2286 1880 842 226 49 101 chr2 42675709 42676094 -210580489 - MLT1A1 LTR MaLR 0 365 1 2478 261 67 37 chr2 42676177 42676354 -210580229 - L1M1 LINE L1 -3699 3871 3701 390 21 0 0 chr2 42676354 42676401 -210580182 + (TG)n Simple_repeat Simple_repeat 2 48 0 2478 261 67 37 chr2 42676401 42677036 -210579547 - L1M1 LINE L1 -3869 3701 2979 2153 123 0 3 chr2 42677036 42677344 -210579239 - AluSx SINE Alu -5 307 1 2478 261 67 37 chr2 42677344 42677725 -210578858 - L1M1 LINE L1 -4591 2979 2611 1754 127 34 7 chr2 42678944 42679236 -210577347 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 42681122 42681150 -210575433 + AT_rich Low_complexity Low_complexity 1 28 0 278 299 0 11 chr2 42681326 42681413 -210575170 + L1ME LINE L1 299 384 -5735 351 261 89 129 chr2 42681628 42681954 -210574629 + L1MEd LINE L1 613 925 -5194 270 120 20 40 chr2 42681956 42682006 -210574577 - MLT2D LTR ERVL 0 414 366 305 299 19 6 chr2 42682006 42682163 -210574420 + (TA)n Simple_repeat Simple_repeat 2 160 0 1818 173 42 33 chr2 42682194 42682553 -210574030 - MLT2D LTR ERVL -48 366 5 382 328 120 12 chr2 42682629 42682955 -210573628 + L1MEd LINE L1 2249 2609 -3520 1593 182 3 46 chr2 42683164 42683466 -210573117 + AluJb SINE Alu 5 293 -19 472 242 0 0 chr2 42683978 42684077 -210572506 - FRAM SINE Alu -11 165 67 803 307 54 44 chr2 42684827 42685686 -210570897 + L1ME LINE L1 403 1108 -5021 1502 196 10 26 chr2 42685686 42685997 -210570586 + AluJo SINE Alu 5 310 -2 803 307 54 44 chr2 42685997 42686055 -210570528 + L1ME LINE L1 1108 1164 -4965 1975 121 147 21 chr2 42686319 42686389 -210570194 - MSTA LTR MaLR 0 428 368 2100 96 20 3 chr2 42686389 42686682 -210569901 + AluSc SINE Alu 1 298 -11 1975 121 147 21 chr2 42686682 42686991 -210569592 - MSTA LTR MaLR -60 368 1 24 0 0 0 chr2 42687640 42687664 -210568919 + AT_rich Low_complexity Low_complexity 1 24 0 1576 204 0 26 chr2 42688563 42688872 -210567711 + AluJb SINE Alu 1 301 -11 207 69 0 0 chr2 42690550 42690579 -210566004 + (TG)n Simple_repeat Simple_repeat 2 30 0 214 208 21 0 chr2 42690838 42690886 -210565697 + (CATA)n Simple_repeat Simple_repeat 3 51 0 5759 153 14 42 chr2 42692263 42693493 -210563090 - L1MA4A LINE L1 -1 6302 5110 268 310 60 35 chr2 42693646 42693762 -210562821 + L2 LINE L2 3154 3272 0 1200 306 61 36 chr2 42694013 42694891 -210561692 + L2 LINE L2 2423 3313 0 981 271 86 17 chr2 42694984 42695334 -210561249 - MLT1A2 LTR MaLR 0 374 1 537 214 63 16 chr2 42695604 42695730 -210560853 - MER5A DNA MER1_type -57 132 1 201 216 0 0 chr2 42695740 42695777 -210560806 + MER5B DNA MER1_type 3 39 -139 5805 57 5 3 chr2 42695783 42696520 -210560063 + L1PA7 LINE L1 5411 6149 -5 27 29 0 0 chr2 42697246 42697280 -210559303 + AT_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr2 42697280 42697301 -210559282 + (TA)n Simple_repeat Simple_repeat 1 21 0 413 342 17 33 chr2 42697420 42697660 -210558923 - L3 LINE CR1 -150 1427 1192 214 284 91 11 chr2 42697912 42698000 -210558583 - L3 LINE CR1 -456 1121 1027 496 317 120 61 chr2 42698231 42698332 -210558251 - L3 LINE CR1 -745 832 738 1632 141 12 4 chr2 42698332 42698580 -210558003 - AluSx SINE Alu -24 288 39 496 317 120 61 chr2 42698580 42698853 -210557730 - L3 LINE CR1 -839 738 436 702 276 65 53 chr2 42700660 42701001 -210555582 + L1ME3 LINE L1 5767 6111 -51 27 81 0 0 chr2 42701064 42701126 -210555457 + AT_rich Low_complexity Low_complexity 1 62 0 1342 93 19 131 chr2 42701186 42701445 -210555138 + MER30 DNA MER1_type 1 230 0 25 51 0 0 chr2 42701903 42701942 -210554641 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr2 42703594 42703616 -210552967 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr2 42703882 42703909 -210552674 + AT_rich Low_complexity Low_complexity 1 27 0 2267 148 19 0 chr2 42704960 42705338 -210551245 - L1PA16 LINE L1 -9 6157 5773 579 74 126 0 chr2 42705341 42705436 -210551147 + L1P4 LINE L1 5361 5467 -699 22 35 0 0 chr2 42705710 42705739 -210550844 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr2 42705928 42705953 -210550630 + AT_rich Low_complexity Low_complexity 1 25 0 1069 245 73 15 chr2 42706767 42707094 -210549489 - L1ME1 LINE L1 -15 6151 5806 313 227 68 23 chr2 42707572 42707660 -210548923 + L1MC4 LINE L1 6614 6705 -1337 202 250 0 0 chr2 42707661 42707705 -210548878 + (TA)n Simple_repeat Simple_repeat 1 44 0 4148 237 24 22 chr2 42707707 42707903 -210548680 - Tigger6a DNA MER2_type -528 1069 875 1444 202 16 45 chr2 42707903 42708279 -210548304 - MLT1A1 LTR MaLR 0 365 1 4148 237 24 22 chr2 42708279 42709148 -210547435 - Tigger6a DNA MER2_type -722 875 2 240 143 0 0 chr2 42710037 42710079 -210546504 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 1352 180 51 8 chr2 42710392 42710648 -210545935 + AluJb SINE Alu 1 267 -45 25 0 0 0 chr2 42711100 42711125 -210545458 + AT_rich Low_complexity Low_complexity 1 25 0 319 89 0 0 chr2 42711243 42711288 -210545295 - MADE1 DNA Mariner 0 80 36 541 369 6 0 chr2 42711497 42711676 -210544907 + MIR SINE MIR 3 182 -80 2143 114 0 10 chr2 42712114 42712421 -210544162 + AluSg SINE Alu 1 304 -6 3007 240 33 29 chr2 42712809 42712822 -210543761 - L1 LINE L1 -3221 4344 4333 1791 110 93 28 chr2 42712822 42713112 -210543471 - AluY SINE Alu -2 309 1 3007 240 33 29 chr2 42713112 42713409 -210543174 - L1 LINE L1 -3232 4333 4039 716 196 8 8 chr2 42713409 42713542 -210543041 + FLAM_A SINE Alu 1 133 0 3007 240 33 29 chr2 42713542 42714788 -210541795 - L1 LINE L1 -3526 4039 2768 2140 321 151 25 chr2 42715313 42716980 -210539603 + L2 LINE L2 1409 3312 -1 33 0 0 0 chr2 42717248 42717281 -210539302 + AT_rich Low_complexity Low_complexity 1 33 0 210 294 43 22 chr2 42717383 42717475 -210539108 + L2 LINE L2 2699 2792 -522 320 242 189 7 chr2 42717737 42717890 -210538693 + MIR SINE MIR 72 252 -10 2472 118 3 14 chr2 42719096 42719462 -210537121 + LTR8 LTR ERV1 1 362 -329 2626 148 78 0 chr2 42719495 42719933 -210536650 - MER41C LTR ERV1 -82 472 1 2037 133 3 62 chr2 42719933 42720100 -210536483 + LTR8 LTR ERV1 359 496 -195 1792 43 56 0 chr2 42720100 42720331 -210536252 + L1PA7 LINE L1 5911 6154 0 2037 133 3 62 chr2 42720331 42720517 -210536066 + LTR8 LTR ERV1 496 691 0 21 0 0 0 chr2 42720583 42720604 -210535979 + AT_rich Low_complexity Low_complexity 1 21 0 222 131 0 49 chr2 42720859 42720920 -210535663 + (TATATG)n Simple_repeat Simple_repeat 5 62 0 1200 254 68 63 chr2 42722467 42722940 -210533643 - MLT1F1 LTR MaLR -22 545 71 474 18 0 0 chr2 42723534 42723589 -210532994 + (CA)n Simple_repeat Simple_repeat 2 56 0 2339 104 0 0 chr2 42723752 42724061 -210532522 + AluSx SINE Alu 1 309 -3 582 137 0 29 chr2 42724305 42724407 -210532176 + Alu SINE Alu 208 306 -5 391 289 13 39 chr2 42725089 42725245 -210531338 - MIR SINE MIR -80 182 31 595 271 43 0 chr2 42725549 42725737 -210530846 - MER63B DNA MER1_type 0 436 241 1443 162 0 19 chr2 42725777 42726042 -210530541 - MER1B DNA MER1_type 0 339 80 553 253 140 0 chr2 42726070 42726220 -210530363 - MER63B DNA MER1_type -263 173 3 557 87 29 10 chr2 42726246 42726349 -210530234 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 249 170 38 0 chr2 42726377 42726430 -210530153 - L1MA9 LINE L1 -4 6308 6254 26 0 0 0 chr2 42726936 42726962 -210529621 + AT_rich Low_complexity Low_complexity 1 26 0 355 312 104 45 chr2 42728223 42728432 -210528151 - MIR SINE MIR -12 250 26 2086 133 0 3 chr2 42728432 42728732 -210527851 + AluSx SINE Alu 1 299 -13 355 312 104 45 chr2 42728732 42728743 -210527840 - MIR SINE MIR -236 26 17 216 0 0 0 chr2 42729646 42729670 -210526913 + (T)n Simple_repeat Simple_repeat 1 24 0 2255 199 34 44 chr2 42730251 42730814 -210525769 - MER74A LTR ERVL -1 557 1 2085 216 50 27 chr2 42731017 42731575 -210525008 - MER90 LTR ERV1 0 614 8 249 33 0 0 chr2 42731610 42731640 -210524943 + (CA)n Simple_repeat Simple_repeat 2 31 0 748 216 7 0 chr2 42731668 42731816 -210524767 + MER82 DNA MER2_type 29 177 -476 * 946 246 50 17 chr2 42731814 42732054 -210524529 + MER82 DNA MER2_type 405 652 -1 319 318 40 16 chr2 42732117 42732243 -210524340 - MIR SINE MIR -133 129 1 1996 208 82 24 chr2 42732741 42733250 -210523333 + MER92B LTR ERV1 98 636 0 2461 66 0 0 chr2 42734806 42735110 -210521473 + AluY SINE Alu 1 304 -7 24 0 0 0 chr2 42735424 42735448 -210521135 + AT_rich Low_complexity Low_complexity 1 24 0 343 272 101 13 chr2 42736249 42736407 -210520176 - L1M4 LINE L1 -805 5341 5170 1010 306 88 30 chr2 42736411 42737416 -210519167 - L1M4 LINE L1 -1120 5026 3964 617 251 196 19 chr2 42737454 42737872 -210518711 - L1MEc LINE L1 -3486 2729 2238 4999 175 34 8 chr2 42737905 42739053 -210517530 - L1MA7 LINE L1 -2 6289 5111 269 312 35 23 chr2 42739339 42739512 -210517071 - L1MEc LINE L1 -4579 1817 1643 852 191 5 43 chr2 42739530 42739740 -210516843 - L1MD3 LINE L1 -18 7977 7776 355 240 78 19 chr2 42739737 42739891 -210516692 + L1MEc LINE L1 2105 2267 -4129 * 25 31 0 0 chr2 42740020 42740052 -210516531 + AT_rich Low_complexity Low_complexity 1 32 0 23 54 0 0 chr2 42740137 42740174 -210516409 + AT_rich Low_complexity Low_complexity 1 37 0 290 353 79 16 chr2 42740327 42740517 -210516066 - MIR SINE MIR -41 221 20 186 43 0 0 chr2 42740851 42740874 -210515709 + (CA)n Simple_repeat Simple_repeat 2 24 0 209 180 20 0 chr2 42741726 42741776 -210514807 + (TA)n Simple_repeat Simple_repeat 1 51 0 442 275 14 43 chr2 42742072 42742210 -210514373 + L2 LINE L2 3180 3313 0 22 0 0 0 chr2 42742398 42742420 -210514163 + AT_rich Low_complexity Low_complexity 1 22 0 3378 316 123 23 chr2 42742763 42744633 -210511950 - L2 LINE L2 0 3313 1139 6167 93 3 8 chr2 42744633 42744863 -210511720 - L1PA11 LINE L1 -1 6173 5943 2494 59 0 3 chr2 42744863 42745168 -210511415 - AluY SINE Alu -7 304 1 6167 93 3 8 chr2 42745168 42746454 -210510129 - L1PA11 LINE L1 -231 5943 4657 3378 316 123 23 chr2 42746454 42746986 -210509597 - L2 LINE L2 -2174 1139 666 610 299 67 9 chr2 42746986 42747210 -210509373 + MIR SINE MIR 2 238 -24 2249 98 0 16 chr2 42747443 42747749 -210508834 - AluSg SINE Alu -6 304 4 802 173 0 0 chr2 42747987 42748120 -210508463 + FLAM_C SINE Alu 1 133 0 336 237 92 66 chr2 42748140 42748292 -210508291 + L1ME4a LINE L1 5966 6121 0 187 231 0 0 chr2 42748873 42748912 -210507671 + MIR SINE MIR 196 234 -28 269 272 81 69 chr2 42749011 42749184 -210507399 + MIR SINE MIR 37 211 -51 10258 144 49 26 chr2 42750703 42750872 -210505711 + Tigger2 DNA MER2_type 847 1011 -1707 1467 155 19 0 chr2 42750872 42751136 -210505447 - L1PB1 LINE L1 -1 6150 5882 10258 144 49 26 chr2 42751136 42752791 -210503792 + Tigger2 DNA MER2_type 1011 2713 -5 27 29 0 0 chr2 42753373 42753407 -210503176 + AT_rich Low_complexity Low_complexity 1 34 0 518 271 52 97 chr2 42753858 42754219 -210502364 - MLT1J LTR MaLR 0 511 170 1930 201 18 13 chr2 42754219 42754613 -210501970 - MSTD LTR MaLR 0 396 1 518 271 52 97 chr2 42754613 42754672 -210501911 - MLT1J LTR MaLR -341 170 110 1406 139 83 0 chr2 42754715 42754967 -210501616 + L1MA5A LINE L1 6015 6287 -10 2306 90 0 3 chr2 42756507 42756808 -210499775 + AluSc SINE Alu 1 300 -9 333 47 0 0 chr2 42756808 42756851 -210499732 + (TA)n Simple_repeat Simple_repeat 2 44 0 315 310 31 0 chr2 42757658 42757787 -210498796 + (TATATG)n Simple_repeat Simple_repeat 2 134 0 21 0 0 0 chr2 42757887 42757908 -210498675 + AT_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr2 42758135 42758162 -210498421 + (TG)n Simple_repeat Simple_repeat 1 27 0 583 221 66 7 chr2 42758184 42758320 -210498263 - MER20 DNA MER1_type -58 161 18 211 291 142 30 chr2 42758346 42758480 -210498103 + MIR SINE MIR 40 188 -74 1913 150 0 3 chr2 42758491 42758784 -210497799 + AluSx SINE Alu 6 297 -15 193 368 53 34 chr2 42759593 42759916 -210496667 + L2 LINE L2 2417 2745 -569 2678 99 0 3 chr2 42759969 42760334 -210496249 - THE1B LTR MaLR 0 364 1 1838 124 10 33 chr2 42762375 42762674 -210493909 + AluSq SINE Alu 22 313 0 22 0 0 0 chr2 42762940 42762962 -210493621 + AT_rich Low_complexity Low_complexity 1 22 0 1008 270 20 27 chr2 42763179 42763472 -210493111 + MLT1A1 LTR MaLR 1 291 -74 1037 260 24 12 chr2 42763494 42763970 -210492613 - L1ME LINE L1 -559 5603 5122 1286 111 10 0 chr2 42763978 42764177 -210492406 - L1MA6 LINE L1 0 6300 6100 307 297 119 11 chr2 42764278 42764463 -210492120 - L1ME LINE L1 -1874 4272 4068 183 320 0 13 chr2 42764725 42764803 -210491780 + MIR SINE MIR 48 124 -138 1867 152 0 3 chr2 42764951 42765262 -210491321 + AluSq SINE Alu 3 312 0 21 0 0 0 chr2 42765286 42765307 -210491276 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 42766024 42766045 -210490538 + AT_rich Low_complexity Low_complexity 1 21 0 234 0 0 0 chr2 42767000 42767026 -210489557 + (CAA)n Simple_repeat Simple_repeat 2 27 0 307 278 104 35 chr2 42767448 42767563 -210489020 - MIR SINE MIR -135 127 5 1835 167 102 39 chr2 42768786 42769247 -210487336 + LTR2B LTR ERV1 1 490 0 210 128 0 0 chr2 42769545 42769584 -210486999 + (T)n Simple_repeat Simple_repeat 1 39 0 1085 199 0 0 chr2 42769841 42770037 -210486546 - AluJo SINE Alu -15 297 102 529 306 197 0 chr2 42771470 42771663 -210484920 - MIR SINE MIR -20 242 12 3755 177 7 6 chr2 42771901 42772617 -210483966 - L1PA13 LINE L1 -1294 4852 4136 * 5702 148 40 3 chr2 42772614 42773831 -210482752 + L1PA13 LINE L1 4885 6163 0 2330 60 0 10 chr2 42774068 42774368 -210482215 - AluY SINE Alu -14 297 1 2262 100 0 3 chr2 42774466 42774766 -210481817 + AluSq SINE Alu 3 301 -12 964 160 0 0 chr2 42774767 42774917 -210481666 + AluSg/x SINE Alu 133 282 -30 357 82 0 0 chr2 42774917 42774966 -210481617 + (TGAA)n Simple_repeat Simple_repeat 2 50 0 23 0 0 0 chr2 42776360 42776383 -210480200 + AT_rich Low_complexity Low_complexity 1 23 0 541 116 11 0 chr2 42776760 42776855 -210479728 - L1MA4 LINE L1 -9 6291 6196 189 367 42 17 chr2 42777658 42777778 -210478805 + L2 LINE L2 2922 3044 -228 194 299 51 43 chr2 42778018 42778135 -210478448 + L3 LINE CR1 630 747 -830 201 192 14 41 chr2 42778479 42778552 -210478031 + CT-rich Low_complexity Low_complexity 3 73 0 222 37 0 0 chr2 42778570 42778597 -210477986 + (CA)n Simple_repeat Simple_repeat 2 28 0 2340 127 31 6 chr2 42778601 42778955 -210477628 + THE1B LTR MaLR 2 364 0 10443 110 12 12 chr2 42778955 42780469 -210476114 + THE1B-int LTR MaLR 1 1514 -66 2086 143 53 6 chr2 42780483 42780825 -210475758 + THE1B LTR MaLR 4 361 -3 180 111 0 0 chr2 42780825 42780852 -210475731 + (CA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr2 42780990 42781011 -210475572 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr2 42781253 42781283 -210475300 + AT_rich Low_complexity Low_complexity 1 30 0 261 0 0 0 chr2 42781696 42781725 -210474858 + (CA)n Simple_repeat Simple_repeat 2 30 0 1835 114 8 0 chr2 42782476 42782739 -210473844 + AluSp SINE Alu 45 309 -4 296 298 114 32 chr2 42782847 42783005 -210473578 - MIR SINE MIR -73 189 19 10619 61 4 0 chr2 42783327 42785454 -210471129 - L1PA6 LINE L1 -3 6151 4018 19424 83 2 5 chr2 42785455 42788156 -210468427 + L1PA6 LINE L1 1353 4045 -2101 215 261 67 126 chr2 42788252 42788371 -210468212 + MIR SINE MIR 40 151 -57 24 0 0 0 chr2 42788703 42788727 -210467856 + AT_rich Low_complexity Low_complexity 1 24 0 1512 219 70 38 chr2 42788946 42789416 -210467167 + MLT1D LTR MaLR 21 505 0 25 31 0 0 chr2 42789532 42789564 -210467019 + AT_rich Low_complexity Low_complexity 1 32 0 22 0 0 0 chr2 42789620 42789642 -210466941 + AT_rich Low_complexity Low_complexity 1 22 0 315 0 0 0 chr2 42789652 42789687 -210466896 + (CA)n Simple_repeat Simple_repeat 2 36 0 208 312 14 80 chr2 42791364 42791502 -210465081 - MIR SINE MIR -93 169 41 594 41 0 0 chr2 42792566 42792639 -210463944 + (TA)n Simple_repeat Simple_repeat 1 73 0 788 303 34 43 chr2 42794741 42795348 -210461235 - L1MEc LINE L1 -3568 2647 2082 450 0 0 0 chr2 42796367 42796417 -210460166 + (TG)n Simple_repeat Simple_repeat 1 50 0 292 351 17 17 chr2 42796942 42797116 -210459467 + MARNA DNA Mariner 132 305 -281 248 325 85 58 chr2 42797442 42797630 -210458953 + L2 LINE L2 3080 3272 0 546 382 4 4 chr2 42798841 42799066 -210457517 + MIR SINE MIR 20 244 -18 500 265 4 80 chr2 42799139 42799377 -210457206 - L1ME1 LINE L1 -69 6097 5878 * 2901 281 41 34 chr2 42799355 42799749 -210456834 - L1MEc LINE L1 -4358 2038 1649 1302 184 0 93 chr2 42799749 42800092 -210456491 - AluY SINE Alu 0 311 1 2901 281 41 34 chr2 42800092 42801126 -210455457 - L1MEc LINE L1 -4747 1649 599 1515 217 25 6 chr2 42801299 42801613 -210454970 - MER2 DNA MER2_type -23 322 3 5275 227 81 52 chr2 42801660 42803989 -210452594 - L1MDa LINE L1 -3890 2650 48 561 292 71 40 chr2 42804006 42804232 -210452351 - L1MEc LINE L1 -5803 593 361 522 273 26 7 chr2 42804284 42804438 -210452145 - L1MEc LINE L1 -6133 263 107 307 252 78 26 chr2 42805945 42806060 -210450523 + MER103 DNA DNA 26 146 -20 757 230 13 39 chr2 42806264 42806494 -210450089 + MLT1H LTR MaLR 21 244 -305 250 291 100 9 chr2 42806534 42806644 -210449939 + MLT1H LTR MaLR 338 457 -98 194 0 0 37 chr2 42806692 42806719 -210449864 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 228 143 0 0 chr2 42807804 42807846 -210448737 + (CA)n Simple_repeat Simple_repeat 1 42 0 486 290 70 38 chr2 42808079 42808389 -210448194 - MLT1H LTR MaLR -185 364 1 246 54 0 0 chr2 42808500 42808537 -210448046 - L1MA3 LINE L1 0 6305 6269 185 354 61 20 chr2 42808564 42808663 -210447920 + L2 LINE L2 3211 3313 0 596 256 6 37 chr2 42808864 42809028 -210447555 + MER58B DNA MER1_type 177 335 -6 305 178 22 56 chr2 42809072 42809162 -210447421 - L1MCa LINE L1 -4345 2081 1995 200 194 10 31 chr2 42809170 42809268 -210447315 + (TA)n Simple_repeat Simple_repeat 1 96 0 291 242 73 57 chr2 42809390 42809514 -210447069 - MIR SINE MIR -4 258 133 7280 46 2 0 chr2 42810557 42812021 -210444562 + L1PA4 LINE L1 4692 6153 -2 190 308 31 0 chr2 42812092 42812157 -210444426 - MIR SINE MIR -12 250 184 187 234 130 26 chr2 42813952 42813964 -210442619 + L3 LINE CR1 667 676 -901 7497 139 18 25 chr2 42813964 42815270 -210441313 + HSMAR2 DNA Mariner 4 1300 -2 187 234 130 26 chr2 42815270 42815334 -210441249 + L3 LINE CR1 676 751 -826 391 343 61 14 chr2 42816266 42816511 -210440072 - MIR SINE MIR 0 262 7 7568 35 1 0 chr2 42817393 42819059 -210437524 - L1PA3 LINE L1 -5 6150 4475 847 260 60 21 chr2 42820578 42820863 -210435720 + L1MD2 LINE L1 6050 6345 -14 293 114 58 37 chr2 42820938 42821184 -210435399 + (TA)n Simple_repeat Simple_repeat 1 251 0 1263 240 21 13 chr2 42821307 42821684 -210434899 + L1ME2 LINE L1 5298 5678 -481 11803 101 7 3 chr2 42821684 42824173 -210432410 + L1PA7 LINE L1 3664 6154 0 1146 232 45 17 chr2 42824288 42824646 -210431937 + L1ME2 LINE L1 5677 6044 -120 1719 148 7 11 chr2 42824845 42825151 -210431432 + AluSx SINE Alu 9 313 0 309 268 19 70 chr2 42825151 42825308 -210431275 + L1M4 LINE L1 4505 4653 -1493 325 269 53 34 chr2 42825325 42825533 -210431050 + L1M4 LINE L1 4795 5006 -1140 569 294 60 0 chr2 42826655 42826839 -210429744 + L1ME LINE L1 35 229 -6167 1493 243 39 74 chr2 42826846 42827485 -210429098 + L1ME LINE L1 304 920 -5476 369 325 15 66 chr2 42827493 42827690 -210428893 - L1MEc LINE L1 -5122 1274 1088 1206 222 186 11 chr2 42827710 42828080 -210428503 - MLT1C LTR MaLR -15 452 18 2880 191 40 11 chr2 42828319 42828931 -210427652 - MER39 LTR ERV1 -35 672 3 1251 236 82 64 chr2 42829675 42830226 -210426357 + MER34C LTR ERV1 1 564 -21 2207 197 45 94 chr2 42830226 42830952 -210425631 + LTR8 LTR ERV1 1 691 0 1251 236 82 64 chr2 42830952 42830975 -210425608 + MER34C LTR ERV1 564 585 0 2723 176 45 12 chr2 42831209 42831715 -210424868 - LTR45 LTR ERV1 -2 523 1 2799 181 23 4 chr2 42831861 42832387 -210424196 + MER34B LTR ERV1 1 536 -29 21 36 0 0 chr2 42832543 42832571 -210424012 + AT_rich Low_complexity Low_complexity 1 28 0 1678 189 3 10 chr2 42832705 42833002 -210423581 + AluJb SINE Alu 1 295 -17 813 239 65 26 chr2 42833215 42833445 -210423138 + LTR16B LTR ERVL 222 460 -4 189 215 25 25 chr2 42833486 42833565 -210423018 + GA-rich Low_complexity Low_complexity 3 81 0 1116 287 96 9 chr2 42834843 42835540 -210421043 + L1ME LINE L1 4556 5313 -833 447 245 52 0 chr2 42835548 42835740 -210420843 + L1ME LINE L1 5283 5484 -678 421 236 171 0 chr2 42835754 42835894 -210420689 + L1MC4 LINE L1 7753 7916 -126 255 273 73 9 chr2 42835988 42836098 -210420485 + L1MC4 LINE L1 7926 8042 0 304 298 128 24 chr2 42836103 42836683 -210419900 + L1ME LINE L1 2355 2994 -3221 369 323 91 25 chr2 42836822 42837218 -210419365 + L1ME LINE L1 3795 4216 -1999 23 0 0 0 chr2 42837404 42837427 -210419156 + AT_rich Low_complexity Low_complexity 1 23 0 316 243 99 9 chr2 42837435 42837546 -210419037 + L1ME3A LINE L1 6041 6161 -9 2147 128 0 6 chr2 42838007 42838319 -210418264 + AluSx SINE Alu 3 312 0 473 284 115 29 chr2 42838384 42838622 -210417961 + L1ME LINE L1 4996 5212 -1019 1923 101 3 60 chr2 42838622 42838940 -210417643 + AluSc SINE Alu 3 302 -7 473 284 115 29 chr2 42838940 42839517 -210417066 + L1ME LINE L1 5212 5890 -341 289 252 23 84 chr2 42840212 42840343 -210416240 + L3 LINE CR1 1326 1448 -129 30 45 0 0 chr2 42840510 42840554 -210416029 + AT_rich Low_complexity Low_complexity 1 44 0 4586 140 18 27 chr2 42840736 42841517 -210415066 - L1PA12 LINE L1 -3 6165 5392 255 289 44 0 chr2 42841925 42842039 -210414544 - L1MC4a LINE L1 -1882 5926 5808 310 273 79 104 chr2 42842181 42842426 -210414157 + L1MEc LINE L1 810 1060 -5336 7932 80 4 6 chr2 42842426 42843499 -210413084 - MER11C LTR ERVK 0 1071 1 310 273 79 104 chr2 42843499 42844177 -210412406 + L1MEc LINE L1 1060 1710 -4686 260 232 78 99 chr2 42844346 42844630 -210411953 + L1MEc LINE L1 2984 3261 -2954 242 250 36 12 chr2 42844778 42844862 -210411721 + Charlie5 DNA MER1_type 25 110 -2502 21 0 0 0 chr2 42844882 42844903 -210411680 + AT_rich Low_complexity Low_complexity 1 21 0 2092 203 87 31 chr2 42844919 42845460 -210411123 - L1MC3 LINE L1 -8 7777 7207 1977 136 27 0 chr2 42845958 42846253 -210410330 + AluSx SINE Alu 1 303 -9 1697 132 31 0 chr2 42846531 42846818 -210409765 + L1MA5 LINE L1 6000 6295 -5 204 40 0 0 chr2 42847619 42847644 -210408939 + (GA)n Simple_repeat Simple_repeat 1 25 0 677 308 156 11 chr2 42847743 42848185 -210408398 - L2 LINE L2 0 3313 2808 3273 147 9 40 chr2 42848559 42849129 -210407454 + MLT2B3 LTR ERVL 1 552 -2 193 324 73 0 chr2 42849206 42849274 -210407309 + L2 LINE L2 3197 3269 -3 265 235 74 74 chr2 42849738 42849900 -210406683 - L2 LINE L2 -50 3263 3102 938 228 111 66 chr2 42850332 42850709 -210405874 + MLT1D LTR MaLR 46 439 -66 2264 120 0 0 chr2 42850740 42851040 -210405543 - AluSx SINE Alu -12 300 1 227 176 0 39 chr2 42851070 42851121 -210405462 + MLT1D LTR MaLR 578 626 0 386 226 57 16 chr2 42852307 42852431 -210404152 + LTR16A1 LTR ERVL 18 146 -311 399 287 69 35 chr2 42852513 42852687 -210403896 + LTR16A1 LTR ERVL 266 445 -12 487 280 76 14 chr2 42853104 42853315 -210403268 + LTR33A LTR ERVL 273 496 -27 22 0 0 0 chr2 42854073 42854095 -210402488 + AT_rich Low_complexity Low_complexity 1 22 0 346 355 85 20 chr2 42854945 42855193 -210401390 + L2 LINE L2 2810 3073 -199 1976 152 133 5 chr2 42855319 42855688 -210400895 - MSTA LTR MaLR 0 428 13 3999 118 62 10 chr2 42855688 42856313 -210400270 - THE1C-int LTR MaLR -922 658 1 1689 165 37 40 chr2 42856313 42856689 -210399894 - THE1C LTR MaLR 0 375 1 476 113 0 78 chr2 42856689 42856809 -210399774 + L1M2 LINE L1 5582 5686 -465 1148 270 84 26 chr2 42856931 42857549 -210399034 - HsTC2c DNA Tc2 -3 726 3 1536 172 0 18 chr2 42857718 42857997 -210398586 + AluJb SINE Alu 35 308 -4 2180 88 0 39 chr2 42858346 42858651 -210397932 - AluSc SINE Alu -16 293 1 584 319 64 13 chr2 42860311 42860546 -210396037 - MIR SINE MIR -13 249 3 1547 135 0 4 chr2 42864035 42864280 -210392303 + L1MA9 LINE L1 5992 6235 -77 850 188 0 0 chr2 42864283 42864421 -210392162 - Tigger3(Golem) DNA MER2_type 0 3035 2898 1658 169 10 16 chr2 42865680 42865987 -210390596 + AluJo SINE Alu 1 305 -7 2081 136 3 0 chr2 42866828 42867137 -210389446 + AluSq SINE Alu 1 310 -3 342 268 69 104 chr2 42868146 42868493 -210388090 + MLT1J LTR MaLR 123 457 -54 25 65 0 0 chr2 42869062 42869108 -210387475 + AT_rich Low_complexity Low_complexity 1 46 0 990 184 53 60 chr2 42869422 42869688 -210386895 + AluJo SINE Alu 49 312 0 391 257 46 46 chr2 42869888 42870063 -210386520 + MER5B DNA MER1_type 4 178 0 273 353 66 7 chr2 42870302 42870438 -210386145 + L2 LINE L2 3121 3264 -8 219 333 126 0 chr2 42870552 42870663 -210385920 - L2 LINE L2 0 3313 3189 2867 182 25 7 chr2 42872615 42873165 -210383418 + L1MC3 LINE L1 7218 7777 -8 871 246 55 67 chr2 42873404 42873734 -210382849 + L2 LINE L2 2988 3313 0 218 271 112 9 chr2 42874935 42875042 -210381541 - L2 LINE L2 -1 3312 3195 284 358 122 25 chr2 42875322 42876054 -210380529 - L2 LINE L2 -1129 2185 1383 505 364 37 12 chr2 42877259 42877501 -210379082 + MIR SINE MIR 1 248 -14 875 294 50 31 chr2 42877789 42878425 -210378158 - L1M4 LINE L1 -801 5345 4698 183 304 72 0 chr2 42878438 42878507 -210378076 + L2 LINE L2 2439 2512 -802 1763 169 14 0 chr2 42879160 42879450 -210377133 - AluSx SINE Alu -18 294 1 585 288 109 48 chr2 42881010 42881340 -210375243 - L3 LINE CR1 -428 1149 800 679 271 102 36 chr2 42881588 42881920 -210374663 - L3 LINE CR1 -797 780 427 1916 123 0 0 chr2 42881978 42882247 -210374336 - AluSq SINE Alu 0 313 45 497 274 26 0 chr2 42882752 42882865 -210373718 - FLAM_A SINE Alu -17 116 1 311 267 0 13 chr2 42883099 42883174 -210373409 + MIR3 SINE MIR 114 187 -21 252 325 26 51 chr2 42883189 42883306 -210373277 + L2 LINE L2 3148 3261 -11 * 731 264 238 17 chr2 42883279 42883970 -210372613 - L2 LINE L2 0 3313 2451 1673 25 10 0 chr2 42883970 42884174 -210372409 - L1PA4 LINE L1 -2 6153 5948 799 50 0 0 chr2 42884174 42884275 -210372308 + L1PA4 LINE L1 5854 5954 -201 489 239 123 0 chr2 42884276 42884406 -210372177 - L2 LINE L2 -854 2460 2315 28 79 0 0 chr2 42884843 42884906 -210371677 + AT_rich Low_complexity Low_complexity 1 63 0 224 284 23 11 chr2 42885002 42885090 -210371493 + (TATG)n Simple_repeat Simple_repeat 4 92 0 24 0 0 0 chr2 42885233 42885257 -210371326 + AT_rich Low_complexity Low_complexity 1 24 0 234 362 0 0 chr2 42886266 42886371 -210370212 + (TGG)n Simple_repeat Simple_repeat 1 105 0 2781 10 0 0 chr2 42886890 42887195 -210369388 - AluYa5 SINE Alu -6 305 1 23 0 0 0 chr2 42887256 42887279 -210369304 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 42887540 42887561 -210369022 + AT_rich Low_complexity Low_complexity 1 21 0 2216 95 7 0 chr2 42888134 42888429 -210368154 - AluY SINE Alu -14 297 1 1662 224 37 67 chr2 42888911 42889419 -210367164 - MLT1D LTR MaLR -12 493 1 405 255 176 20 chr2 42890878 42891031 -210365552 + MER5A DNA MER1_type 7 183 -6 276 146 18 0 chr2 42891381 42891436 -210365147 - L1MA6 LINE L1 0 6300 6245 1007 283 177 15 chr2 42891606 42892620 -210363963 - L1MEc LINE L1 -3215 3000 1835 918 120 0 0 chr2 42892801 42892934 -210363649 - THE1B LTR MaLR 0 364 232 26 50 0 0 chr2 42893149 42893189 -210363394 + AT_rich Low_complexity Low_complexity 1 40 0 653 197 8 8 chr2 42893189 42893316 -210363267 - FRAM SINE Alu -49 127 1 322 309 41 0 chr2 42893698 42893795 -210362788 + L3 LINE CR1 1476 1576 -1 236 401 103 8 chr2 42894964 42895363 -210361220 - LTR67 LTR ERVL -85 472 36 804 186 0 0 chr2 42895446 42895575 -210361008 + FLAM_C SINE Alu 1 129 -4 191 335 46 64 chr2 42896779 42896952 -210359631 + MIR SINE MIR 29 198 -64 25 0 0 0 chr2 42897372 42897397 -210359186 + AT_rich Low_complexity Low_complexity 1 25 0 273 297 27 45 chr2 42898103 42898150 -210358433 - MIR3 SINE MIR -8 200 154 1137 233 5 0 chr2 42898150 42898373 -210358210 - MER58A DNA MER1_type 0 224 1 273 297 27 45 chr2 42898373 42898436 -210358147 - MIR3 SINE MIR -54 154 92 1611 237 44 50 chr2 42898520 42899064 -210357519 + LTR55 LTR ERV 1 541 -7 265 220 0 17 chr2 42899634 42899693 -210356890 + MLT1-int LTR MaLR 5 62 -1309 803 264 67 0 chr2 42900901 42901219 -210355364 - L1ME2 LINE L1 -334 5830 5537 459 290 103 50 chr2 42901316 42901675 -210354908 + L1M4 LINE L1 4288 4665 -1481 198 0 0 0 chr2 42901923 42901945 -210354638 + (GGGAGA)n Simple_repeat Simple_repeat 4 25 0 25 31 0 0 chr2 42901945 42901977 -210354606 + AT_rich Low_complexity Low_complexity 1 32 0 408 40 0 0 chr2 42902333 42902383 -210354200 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 212 364 11 0 chr2 42902416 42902504 -210354079 - MIR SINE MIR -122 140 52 21 0 0 0 chr2 42902707 42902728 -210353855 + AT_rich Low_complexity Low_complexity 1 21 0 1690 156 32 3 chr2 42902931 42903253 -210353330 + AluSx SINE Alu 1 312 0 224 348 31 11 chr2 42903665 42903763 -210352820 + MIR SINE MIR 42 140 -91 1897 150 10 22 chr2 42904347 42904661 -210351922 + AluSx SINE Alu 1 310 -2 524 124 9 26 chr2 42904669 42904782 -210351801 + (GAA)n Simple_repeat Simple_repeat 1 111 0 188 294 65 54 chr2 42905021 42905113 -210351470 - MER5B DNA MER1_type -2 176 84 8689 151 20 15 chr2 42906038 42908408 -210348175 - L1PA11 LINE L1 0 6174 3781 319 228 25 0 chr2 42908923 42909002 -210347581 - MER5A DNA MER1_type -80 109 29 663 211 0 6 chr2 42909136 42909297 -210347286 + L1M4c LINE L1 1074 1233 -5151 1641 166 163 17 chr2 42909328 42909689 -210346894 + MSTA LTR MaLR 1 414 -14 1578 224 36 58 chr2 42909696 42910218 -210346365 + L1 LINE L1 3724 4234 -1912 3851 136 43 18 chr2 42910768 42911444 -210345139 - L1PA16 LINE L1 -9 6157 5465 251 330 48 73 chr2 42911584 42911790 -210344793 + MIR SINE MIR 15 215 -47 1301 268 100 5 chr2 42911801 42912170 -210344413 - LTR16C LTR ERVL 0 491 88 236 327 206 22 chr2 42912520 42912884 -210343699 + L2 LINE L2 1810 2240 -1074 354 61 0 0 chr2 42913631 42913680 -210342903 + (CA)n Simple_repeat Simple_repeat 2 50 0 225 94 0 0 chr2 42913680 42913712 -210342871 + (GA)n Simple_repeat Simple_repeat 1 32 0 35 0 0 0 chr2 42914012 42914047 -210342536 + AT_rich Low_complexity Low_complexity 1 35 0 220 380 14 56 chr2 42915706 42915848 -210340735 + L2 LINE L2 3137 3272 0 317 283 0 67 chr2 42917253 42917373 -210339210 + MIR SINE MIR 32 143 -119 343 265 75 118 chr2 42918166 42918428 -210338155 - HAL1b LINE L1 -7 1341 1098 512 89 0 25 chr2 42918428 42918507 -210338076 + L1PA13 LINE L1 6085 6161 -2 343 265 75 118 chr2 42918507 42918617 -210337966 - HAL1b LINE L1 -250 1098 985 471 74 62 25 chr2 42918802 42918883 -210337700 + L1PA13 LINE L1 6080 6163 0 511 249 127 77 chr2 42919047 42919425 -210337158 - HAL1b LINE L1 -621 727 331 267 31 0 0 chr2 42920432 42920464 -210336119 + (CA)n Simple_repeat Simple_repeat 1 32 0 185 217 43 22 chr2 42920572 42920618 -210335965 - L3 LINE CR1 -1088 489 443 250 179 194 30 chr2 42921126 42921193 -210335390 + L2 LINE L2 3235 3312 -1 267 301 0 0 chr2 42921238 42921311 -210335272 - MIR SINE MIR -109 153 81 285 347 40 55 chr2 42921364 42921690 -210334893 - MLT1K LTR MaLR -86 502 182 422 208 0 123 chr2 42921754 42921884 -210334699 - MER81 DNA DNA 0 114 1 204 143 0 0 chr2 42921969 42922011 -210334572 + (TA)n Simple_repeat Simple_repeat 2 43 0 204 299 28 47 chr2 42922759 42922866 -210333717 + MER5A DNA MER1_type 40 144 -45 187 386 31 8 chr2 42922886 42923013 -210333570 - MER5B DNA MER1_type -24 154 25 246 32 0 0 chr2 42923982 42924013 -210332570 + (CA)n Simple_repeat Simple_repeat 2 32 0 197 329 53 0 chr2 42924525 42924601 -210331982 + L2 LINE L2 3148 3227 -86 2412 108 0 3 chr2 42924974 42925318 -210331265 + L1PA14 LINE L1 5691 6033 -128 289 326 23 16 chr2 42925347 42925476 -210331107 + MLT1L LTR MaLR 194 323 -292 2324 147 52 2 chr2 42925544 42925952 -210330631 - MSTA LTR MaLR 0 428 1 326 301 96 29 chr2 42926073 42926229 -210330354 + MIR SINE MIR 34 197 -64 251 402 16 0 chr2 42926247 42926369 -210330214 - L2 LINE L2 0 3272 3149 236 224 15 0 chr2 42926469 42926536 -210330047 + (TA)n Simple_repeat Simple_repeat 2 69 0 407 211 39 10 chr2 42927583 42927687 -210328896 + L1ME4a LINE L1 5969 6075 -46 28 0 0 0 chr2 42930024 42930052 -210326531 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr2 42930072 42930103 -210326480 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr2 42931894 42931916 -210324667 + AT_rich Low_complexity Low_complexity 1 22 0 261 353 39 10 chr2 42932188 42932290 -210324293 - MIR SINE MIR -157 105 1 225 175 0 0 chr2 42932628 42932668 -210323915 + CT-rich Low_complexity Low_complexity 1 40 0 215 190 17 0 chr2 42933840 42933898 -210322685 + (TG)n Simple_repeat Simple_repeat 2 60 0 224 326 7 96 chr2 42934483 42934618 -210321965 - MIR3 SINE MIR -46 162 40 1323 283 79 135 chr2 42934749 42936374 -210320209 - L2 LINE L2 -4 3309 1790 479 222 82 15 chr2 42936538 42936673 -210319910 - L2 LINE L2 -1995 1319 1176 273 254 99 0 chr2 42936699 42936770 -210319813 - MIR SINE MIR -174 88 11 217 329 72 13 chr2 42936858 42937010 -210319573 + L2 LINE L2 2246 2406 -908 276 30 0 0 chr2 42937213 42937246 -210319337 + (CA)n Simple_repeat Simple_repeat 2 34 0 299 155 0 17 chr2 42937249 42937307 -210319276 + MLT1E3 LTR MaLR 566 622 -2 201 356 19 3 chr2 42937366 42937476 -210319107 + MIR SINE MIR 33 144 -64 343 241 106 14 chr2 42937802 42937943 -210318640 - L1M4 LINE L1 -3776 2370 2217 4820 140 56 29 chr2 42937951 42938974 -210317609 - L1MA6 LINE L1 -46 6254 5204 4042 61 72 34 chr2 42938974 42939560 -210317023 + LTR14B LTR ERVK 1 608 0 4820 140 56 29 chr2 42939560 42939592 -210316991 - L1MA6 LINE L1 -1096 5204 5174 296 175 41 0 chr2 42939821 42939918 -210316665 + (TA)n Simple_repeat Simple_repeat 2 102 0 29 47 0 0 chr2 42939936 42939979 -210316604 + AT_rich Low_complexity Low_complexity 1 43 0 242 388 77 6 chr2 42940039 42940222 -210316361 - L3b LINE CR1 0 1583 1388 311 207 42 22 chr2 42940620 42940712 -210315871 - MLT1F LTR MaLR -16 526 436 679 279 53 4 chr2 42941088 42941314 -210315269 - MIR SINE MIR -14 248 12 285 306 25 87 chr2 42942929 42943125 -210313458 + L2 LINE L2 2362 2545 -769 360 0 0 0 chr2 42943146 42943186 -210313397 + (TAA)n Simple_repeat Simple_repeat 3 42 0 5853 155 15 11 chr2 42943338 42943697 -210312886 - L1PB2 LINE L1 -1 6150 5794 288 0 0 0 chr2 42943697 42943729 -210312854 + (TG)n Simple_repeat Simple_repeat 2 33 0 * 393 22 0 0 chr2 42943728 42943774 -210312809 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 5853 155 15 11 chr2 42943729 42945415 -210311168 - L1PB2 LINE L1 -357 5794 4151 295 333 50 44 chr2 42945484 42945664 -210310919 + L2 LINE L2 2723 2903 -411 253 195 13 26 chr2 42945665 42945742 -210310841 + CT-rich Low_complexity Low_complexity 4 79 0 2145 254 74 11 chr2 42945924 42946448 -210310135 + MLT1F1 LTR MaLR 11 567 0 22 0 0 0 chr2 42946496 42946518 -210310065 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 42947318 42947340 -210309243 + AT_rich Low_complexity Low_complexity 1 22 0 760 195 72 81 chr2 42947856 42948037 -210308546 - MER20 DNA MER1_type 0 219 39 739 193 44 6 chr2 42948037 42948218 -210308365 + MER53 DNA DNA 2 189 0 760 195 72 81 chr2 42948218 42948257 -210308326 - MER20 DNA MER1_type -180 39 1 428 310 132 50 chr2 42948934 42949253 -210307330 + L2 LINE L2 2171 2515 -799 207 204 0 0 chr2 42949389 42949438 -210307145 + (TG)n Simple_repeat Simple_repeat 1 49 0 26 0 0 0 chr2 42949775 42949801 -210306782 + AT_rich Low_complexity Low_complexity 1 26 0 1073 186 27 9 chr2 42950132 42950352 -210306231 + L1MC1 LINE L1 6110 6333 0 6191 154 8 28 chr2 42950545 42950830 -210305753 + L1PA8A LINE L1 227 516 -5945 2183 125 3 0 chr2 42950830 42951141 -210305442 + AluSx SINE Alu 1 312 0 6191 154 8 28 chr2 42951141 42952920 -210303663 + L1PA8A LINE L1 516 2629 -3832 1172 111 19 87 chr2 42952964 42953171 -210303412 - L1P3 LINE L1 -5671 204 12 10257 118 6 29 chr2 42953171 42955506 -210301077 + L1PA8A LINE L1 4125 6445 -1 330 325 8 8 chr2 42956162 42956279 -210300304 + L2 LINE L2 2130 2246 -1068 1385 260 89 50 chr2 42956459 42957003 -210299580 + L1MEc LINE L1 45 566 -5830 872 264 14 0 chr2 42957003 42957219 -210299364 + MER20 DNA MER1_type 1 219 0 1385 260 89 50 chr2 42957219 42957619 -210298964 + L1MEc LINE L1 566 1076 -5320 2140 128 3 0 chr2 42957619 42957925 -210298658 + AluSg SINE Alu 1 307 -3 1385 260 89 50 chr2 42957925 42958021 -210298562 + L1MEc LINE L1 1076 1167 -5229 33 0 0 0 chr2 42958228 42958261 -210298322 + AT_rich Low_complexity Low_complexity 1 33 0 511 284 37 61 chr2 42958280 42958646 -210297937 + L1MEc LINE L1 1148 1666 -4730 * 10769 195 45 10 chr2 42958640 42961063 -210295520 - L1MA4 LINE L1 -914 5232 2724 5182 165 32 8 chr2 42961064 42962065 -210294518 + L1MA4 LINE L1 5254 6278 -22 966 167 36 23 chr2 42962083 42962423 -210294160 + L1MEc LINE L1 1626 5427 -796 370 210 84 28 chr2 42962418 42962561 -210294022 + L1M4 LINE L1 3174 3324 -2822 * 2962 242 78 80 chr2 42962656 42963793 -210292790 + L1M3 LINE L1 72 1242 -5404 1638 201 17 0 chr2 42963793 42964087 -210292496 + AluJb SINE Alu 3 301 -11 2962 242 78 80 chr2 42964087 42965026 -210291557 + L1M3 LINE L1 1242 2181 -4465 357 219 189 6 chr2 42965043 42965207 -210291376 + L1M3 LINE L1 2299 2492 -4154 * 1470 212 139 42 chr2 42965180 42965207 -210291376 + L1M3 LINE L1 5781 5804 -874 1876 124 0 0 chr2 42965207 42965473 -210291110 + AluSx SINE Alu 34 299 -13 1470 212 139 42 chr2 42965473 42965593 -210290990 + L1M3 LINE L1 5804 5911 -767 2465 114 3 16 chr2 42965593 42965962 -210290621 - THE1B LTR MaLR 0 364 1 1470 212 139 42 chr2 42965962 42966265 -210290318 + L1M3 LINE L1 5911 6276 -402 * 6675 248 62 34 chr2 42966262 42967221 -210289362 - L1 LINE L1 -2218 3816 2885 1761 142 71 0 chr2 42967221 42967489 -210289094 + AluSx SINE Alu 1 287 -25 6675 248 62 34 chr2 42967489 42968401 -210288182 - L1 LINE L1 -3149 2885 2000 1129 43 0 0 chr2 42968401 42968541 -210288042 - L1PA8 LINE L1 -6 6166 6027 6675 248 62 34 chr2 42968541 42969364 -210287219 - L1 LINE L1 -4034 2000 1202 1398 218 0 35 chr2 42969364 42969680 -210286903 - AluJo SINE Alu -7 305 1 6675 248 62 34 chr2 42969680 42970690 -210285893 - L1 LINE L1 -4832 1202 318 1753 298 24 11 chr2 42970774 42971333 -210285250 - L1M3a LINE L1 -5212 743 2 25 31 0 0 chr2 42971419 42971451 -210285132 + AT_rich Low_complexity Low_complexity 1 32 0 1885 138 7 0 chr2 42974130 42974406 -210282177 + AluY SINE Alu 1 278 -33 26 0 0 0 chr2 42974406 42974432 -210282151 + AT_rich Low_complexity Low_complexity 1 26 0 301 280 64 55 chr2 42974504 42974740 -210281843 - L1MEc LINE L1 -4445 1951 1714 1237 275 96 54 chr2 42974828 42975381 -210281202 - L2 LINE L2 -902 2412 1837 210 71 0 0 chr2 42975905 42975933 -210280650 + (TC)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr2 42976447 42976476 -210280107 + AT_rich Low_complexity Low_complexity 1 29 0 182 170 0 43 chr2 42977257 42977304 -210279279 + (TATG)n Simple_repeat Simple_repeat 3 47 0 350 341 7 30 chr2 42977593 42977728 -210278855 - MIR3 SINE MIR -5 203 72 272 342 26 53 chr2 42977976 42978128 -210278455 + MLT1K LTR MaLR 8 155 -433 703 142 0 13 chr2 42978628 42978783 -210277800 + (GGGA)n Simple_repeat Simple_repeat 3 155 0 1727 179 15 80 chr2 42978795 42979197 -210277386 + MLT1B LTR MaLR 15 390 0 183 80 0 0 chr2 42979199 42979224 -210277359 + (A)n Simple_repeat Simple_repeat 1 25 0 999 292 86 28 chr2 42979245 42979677 -210276906 - MLT1C LTR MaLR -5 462 6 3246 161 65 3 chr2 42979949 42980546 -210276037 - L1PA16 LINE L1 -9 6157 5524 21 89 0 0 chr2 42980713 42980769 -210275814 + AT_rich Low_complexity Low_complexity 1 56 0 2465 81 0 0 chr2 42982117 42982426 -210274157 - AluY SINE Alu -2 309 1 5795 146 7 32 chr2 42983827 42985175 -210271408 + L1PA16 LINE L1 4842 6157 -9 2087 191 54 92 chr2 42985817 42986468 -210270115 + MLT1E2 LTR MaLR 1 626 0 36 23 0 0 chr2 42986798 42986841 -210269742 + AT_rich Low_complexity Low_complexity 1 43 0 279 353 65 5 chr2 42986881 42987057 -210269526 + MIR3 SINE MIR 21 204 -32 302 365 76 14 chr2 42988324 42988535 -210268048 + HAL1b LINE L1 682 905 -443 321 320 29 10 chr2 42989552 42989655 -210266928 - MLT1J LTR MaLR -167 344 240 210 71 0 0 chr2 42989778 42989806 -210266777 + (T)n Simple_repeat Simple_repeat 1 28 0 431 295 195 9 chr2 42990544 42990754 -210265829 + MIR SINE MIR 14 262 0 231 185 0 37 chr2 42991760 42991841 -210264742 + CT-rich Low_complexity Low_complexity 3 80 0 180 0 0 0 chr2 42991962 42991982 -210264601 + (TTC)n Simple_repeat Simple_repeat 3 22 0 678 334 126 12 chr2 42992285 42992830 -210263753 - L2 LINE L2 -62 3251 2646 449 303 107 30 chr2 42993468 42993702 -210262881 + MIR SINE MIR 7 258 -4 27 29 0 0 chr2 42993744 42993778 -210262805 + AT_rich Low_complexity Low_complexity 1 34 0 385 285 114 14 chr2 42994039 42994192 -210262391 + MIR SINE MIR 37 204 -58 23 0 0 0 chr2 42995025 42995048 -210261535 + AT_rich Low_complexity Low_complexity 1 23 0 868 257 28 9 chr2 42995518 42995736 -210260847 + MER58A DNA MER1_type 1 222 -2 649 307 158 37 chr2 42995835 42996291 -210260292 - LTR33 LTR ERVL -10 511 1 598 346 107 54 chr2 42996704 42997469 -210259114 + L2 LINE L2 2432 3251 -21 302 240 170 10 chr2 42997616 42997716 -210258867 + LTR50 LTR ERVL 88 203 -592 555 244 81 35 chr2 42997744 42997941 -210258642 - L1MA10 LINE L1 -18 6316 6111 1143 307 89 35 chr2 42997989 42998252 -210258331 + ERVL LTR ERVL 4441 4688 -1076 1977 202 33 76 chr2 42998252 42998831 -210257752 + MLT2B3 LTR ERVL 1 554 0 1143 307 89 35 chr2 42998831 42999118 -210257465 + ERVL LTR ERVL 4688 5021 -743 259 230 54 0 chr2 42999775 42999849 -210256734 + LTR50 LTR ERVL 1 78 -717 1041 217 188 5 chr2 42999851 43000219 -210256364 - MER63B DNA MER1_type 0 436 2 234 286 191 42 chr2 43000245 43000413 -210256170 + LTR50 LTR ERVL 105 297 -498 6344 154 29 4 chr2 43000499 43001594 -210254989 - Tigger1 DNA MER2_type -1 2417 1295 13842 33 0 0 chr2 43001594 43003250 -210253333 - L1PA4 LINE L1 -1064 5082 3427 7247 40 5 0 chr2 43003250 43004313 -210252270 + L1PA4 LINE L1 5086 6152 -3 8240 134 22 4 chr2 43004325 43005587 -210250996 - Tigger1 DNA MER2_type -1108 1310 26 21 0 0 0 chr2 43005889 43005910 -210250673 + AT_rich Low_complexity Low_complexity 1 21 0 225 108 0 0 chr2 43006140 43006177 -210250406 + (T)n Simple_repeat Simple_repeat 1 37 0 1977 157 27 0 chr2 43006685 43007023 -210249560 - MER7A DNA MER2_type 0 346 2 1732 261 87 44 chr2 43007676 43008917 -210247666 - L1ME1 LINE L1 -50 6911 5607 318 241 11 0 chr2 43008912 43008999 -210247584 - L1ME1 LINE L1 -1833 5108 5021 * 1626 233 39 64 chr2 43008999 43009532 -210247051 + MLT2B1 LTR ERVL 1 520 0 1070 282 92 21 chr2 43009533 43009955 -210246628 + ERVL-B1 LTR ERVL 2 453 -5311 872 111 37 58 chr2 43009956 43010145 -210246438 + L1MA7 LINE L1 5956 6140 -151 399 238 101 21 chr2 43010167 43010356 -210246227 - L1ME1 LINE L1 -2397 4544 4341 254 151 0 38 chr2 43010358 43010411 -210246172 + L1PA16 LINE L1 6107 6157 -9 481 169 12 0 chr2 43010418 43010501 -210246082 - Ricksha DNA DNA -315 2539 2456 735 123 9 0 chr2 43010508 43010622 -210245961 - Ricksha DNA DNA -1139 115 1 368 303 32 60 chr2 43010626 43010773 -210245810 + L1ME LINE L1 5518 5659 -462 2167 108 0 29 chr2 43010773 43011080 -210245503 + AluSp SINE Alu 1 298 -15 368 303 32 60 chr2 43011080 43011150 -210245433 + L1ME LINE L1 5659 5729 -392 200 100 25 0 chr2 43011481 43011521 -210245062 + (TA)n Simple_repeat Simple_repeat 1 41 0 478 250 94 23 chr2 43011565 43011873 -210244710 - L1ME1 LINE L1 -2648 4293 3964 * 596 303 105 22 chr2 43011872 43012187 -210244396 - L1ME1 LINE L1 -4892 1531 1243 3669 126 26 38 chr2 43012187 43012848 -210243735 + MER39B LTR ERV1 1 653 0 596 303 105 22 chr2 43012848 43013532 -210243051 - L1ME1 LINE L1 -5180 1243 795 810 296 46 35 chr2 43013838 43014270 -210242313 - L1ME1 LINE L1 -5961 462 26 639 113 0 57 chr2 43014484 43014608 -210241975 + L1MA8 LINE L1 6170 6286 -5 369 238 56 148 chr2 43015234 43015558 -210241025 - MLT1I LTR MaLR -25 384 98 230 258 0 30 chr2 43017007 43017073 -210239510 + MIR SINE MIR 153 216 -46 2244 110 48 25 chr2 43017146 43017502 -210239081 - THE1B LTR MaLR 0 364 1 11329 103 1 6 chr2 43017502 43019090 -210237493 - THE1B-int LTR MaLR 0 1580 1 2141 119 36 25 chr2 43019090 43019450 -210237133 - THE1B LTR MaLR 0 364 1 1997 126 14 3 chr2 43019565 43019858 -210236725 + AluSg SINE Alu 1 296 -14 394 336 38 0 chr2 43019966 43020097 -210236486 + MIR SINE MIR 8 143 -119 227 326 12 0 chr2 43020654 43020740 -210235843 + MIR SINE MIR 176 262 0 394 352 59 12 chr2 43021110 43021273 -210235310 + L1ME LINE L1 5483 5637 -484 1859 149 3 37 chr2 43021273 43021596 -210234987 + AluSx SINE Alu 1 312 0 394 352 59 12 chr2 43021596 43021753 -210234830 + L1ME LINE L1 5637 5818 -303 575 219 39 28 chr2 43023444 43023622 -210232961 + MLT1C LTR MaLR 148 327 -140 1227 237 38 38 chr2 43023624 43024050 -210232533 - L1M4 LINE L1 -3023 3123 2698 321 274 104 47 chr2 43025596 43025782 -210230801 + MIR SINE MIR 3 196 -66 212 325 121 0 chr2 43027275 43027358 -210229225 + MIR SINE MIR 59 151 -111 236 191 43 0 chr2 43027634 43027680 -210228903 - MER5A DNA MER1_type -71 118 71 225 224 60 15 chr2 43027680 43027747 -210228836 + MER5C DNA MER1_type 1 70 -254 188 328 17 17 chr2 43028102 43028160 -210228423 + MIR SINE MIR 45 102 -160 2275 67 3 3 chr2 43028639 43028945 -210227638 + AluY SINE Alu 1 306 0 276 345 28 21 chr2 43030533 43030675 -210225908 - L3 LINE CR1 -4 1573 1431 303 369 88 23 chr2 43031193 43031453 -210225130 + L2 LINE L2 2921 3197 -116 523 270 154 35 chr2 43031455 43031714 -210224869 - L2 LINE L2 0 3313 3024 393 256 74 41 chr2 43031710 43031831 -210224752 + L2 LINE L2 3148 3272 0 * 483 316 158 39 chr2 43031906 43032526 -210224057 - L2 LINE L2 -616 2698 2005 2112 217 37 15 chr2 43032554 43033079 -210223504 + L1MD3 LINE L1 7441 8038 -4 460 293 102 0 chr2 43033080 43033227 -210223356 + MIR SINE MIR 42 203 -59 39 50 0 0 chr2 43033384 43033444 -210223139 + AT_rich Low_complexity Low_complexity 1 60 0 1709 192 7 3 chr2 43035916 43036208 -210220375 + AluJb SINE Alu 1 293 -19 342 261 11 0 chr2 43036343 43036431 -210220152 + MER58 DNA MER1_type 3 91 -124 361 223 21 0 chr2 43036451 43036545 -210220038 + MER58 DNA MER1_type 2319 2414 -6 183 139 0 0 chr2 43038288 43038324 -210218259 + (CA)n Simple_repeat Simple_repeat 2 37 0 264 352 52 5 chr2 43039108 43039321 -210217262 + L1ME LINE L1 5576 5798 -323 2834 247 88 22 chr2 43039415 43039630 -210216953 - L1ME1 LINE L1 -7 6159 5960 2417 79 0 16 chr2 43039630 43039946 -210216637 - AluY SINE Alu 0 311 1 2834 247 88 22 chr2 43039946 43041472 -210215111 - L1ME1 LINE L1 -206 5960 4299 2327 47 50 7 chr2 43042488 43042785 -210213798 - AluY SINE Alu -1 310 1 234 204 10 112 chr2 43043940 43044038 -210212545 - L2 LINE L2 -1 3312 3225 1641 132 18 7 chr2 43044102 43044382 -210212201 - L1MA5 LINE L1 -6 6294 6012 21 0 0 0 chr2 43044894 43044915 -210211668 + AT_rich Low_complexity Low_complexity 1 21 0 2325 100 0 3 chr2 43045266 43045576 -210211007 - AluSg SINE Alu -1 309 1 2478 188 93 31 chr2 43045809 43046329 -210210254 + L1MC3 LINE L1 7130 7695 -90 373 175 62 0 chr2 43046329 43046426 -210210157 + L1PA8 LINE L1 6070 6172 0 2478 188 93 31 chr2 43046426 43046516 -210210067 + L1MC3 LINE L1 7695 7778 -7 2271 110 10 0 chr2 43046551 43046860 -210209723 + AluSx SINE Alu 1 312 0 1039 107 0 0 chr2 43047646 43047795 -210208788 + AluSg/x SINE Alu 159 307 -5 276 321 83 42 chr2 43048065 43048233 -210208350 - MIR3 SINE MIR -25 183 9 23 0 0 0 chr2 43048895 43048918 -210207665 + AT_rich Low_complexity Low_complexity 1 23 0 2196 77 7 20 chr2 43049863 43050163 -210206420 + AluY SINE Alu 1 296 -15 295 297 109 63 chr2 43050550 43050789 -210205794 - MIR SINE MIR 0 262 13 23 33 0 0 chr2 43050822 43050852 -210205731 + AT_rich Low_complexity Low_complexity 1 30 0 411 244 13 0 chr2 43050860 43050938 -210205645 + AluJ/FLAM SINE Alu 1 79 -223 244 198 81 23 chr2 43052237 43052323 -210204260 + L1ME2 LINE L1 3197 3287 -2859 1475 266 104 35 chr2 43052382 43053056 -210203527 + L1ME2 LINE L1 3436 4173 -1973 2435 65 7 0 chr2 43053056 43053365 -210203218 + AluY SINE Alu 1 311 0 1475 266 104 35 chr2 43053365 43053471 -210203112 + L1ME2 LINE L1 4173 4270 -1876 1130 280 129 25 chr2 43053471 43053690 -210202893 + MLT1G1 LTR MaLR 1 196 -399 306 0 0 0 chr2 43053690 43053724 -210202859 + (TC)n Simple_repeat Simple_repeat 1 34 0 1130 280 129 25 chr2 43053724 43054014 -210202569 + MLT1G1 LTR MaLR 196 563 -32 256 208 81 102 chr2 43054036 43054233 -210202350 + L1ME2 LINE L1 4263 4455 -1691 920 220 65 79 chr2 43054238 43054483 -210202100 - MLT1A2 LTR MaLR -4 370 130 312 23 23 0 chr2 43054483 43054527 -210202056 + L1PA4 LINE L1 6108 6152 -3 920 220 65 79 chr2 43054527 43054649 -210201934 - MLT1A2 LTR MaLR -244 130 8 1797 248 74 16 chr2 43054655 43055389 -210201194 + L1ME2 LINE L1 4451 5226 -920 2117 244 44 64 chr2 43055393 43055857 -210200726 + L1ME2 LINE L1 5282 5721 -443 2383 147 75 0 chr2 43055857 43056259 -210200324 + MSTB1 LTR MaLR 1 432 0 2117 244 44 64 chr2 43056259 43056694 -210199889 + L1ME2 LINE L1 5721 6163 -1 251 259 74 0 chr2 43056876 43056984 -210199599 + L1MC4 LINE L1 7924 8039 -3 257 0 30 0 chr2 43057017 43057050 -210199533 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 504 17 0 0 chr2 43057050 43057109 -210199474 - L1PA4 LINE L1 -10 6145 6087 441 396 57 8 chr2 43057323 43057588 -210198995 + L2 LINE L2 2995 3272 0 373 294 162 0 chr2 43058626 43058762 -210197821 - MIR SINE MIR -74 188 31 244 267 53 0 chr2 43059709 43059784 -210196799 - MIR SINE MIR 0 262 184 246 344 0 0 chr2 43060459 43060523 -210196060 - L2 LINE L2 -8 3264 3201 292 311 165 0 chr2 43061489 43061592 -210194991 + L2 LINE L2 3151 3270 -2 625 165 9 26 chr2 43061665 43061780 -210194803 - MER81 DNA DNA 0 114 2 996 191 22 11 chr2 43062729 43062912 -210193671 - AluJo SINE Alu -8 304 120 410 271 163 24 chr2 43063070 43063400 -210193183 + L1ME LINE L1 5283 5657 -509 757 244 75 10 chr2 43064173 43064374 -210192209 + MIR SINE MIR 11 224 -38 2154 93 38 0 chr2 43065165 43065454 -210191129 - AluSx SINE Alu -10 302 3 516 234 123 73 chr2 43067047 43067363 -210189220 + L2 LINE L2 1582 1913 -1401 848 234 90 49 chr2 43067363 43067861 -210188722 + LTR50 LTR ERVL 1 669 -126 362 172 54 21 chr2 43067928 43068021 -210188562 - L1MA9 LINE L1 0 6312 6217 2364 179 42 22 chr2 43068021 43068402 -210188181 - LOR1b LTR ERV1 0 461 68 3429 43 0 0 chr2 43068402 43068817 -210187766 - L1PA3 LINE L1 -3 6152 5738 2364 179 42 22 chr2 43068817 43068887 -210187696 - LOR1b LTR ERV1 -393 68 1 4647 166 23 6 chr2 43068887 43068945 -210187638 - L1MA9 LINE L1 -93 6219 6163 207 0 0 0 chr2 43068945 43068968 -210187615 + (TG)n Simple_repeat Simple_repeat 2 24 0 4647 166 23 6 chr2 43068968 43069749 -210186834 - L1MA9 LINE L1 -149 6163 5366 2501 263 120 19 chr2 43069784 43070883 -210185700 + L2 LINE L2 1909 3124 -189 3642 213 84 109 chr2 43070988 43072611 -210183972 - HERVH LTR ERV1 -5661 2052 494 180 77 0 0 chr2 43072611 43072637 -210183946 + (TGGGGG)n Simple_repeat Simple_repeat 1 26 0 3642 213 84 109 chr2 43072637 43073119 -210183464 - HERVH LTR ERV1 -7219 494 1 1160 193 102 58 chr2 43073119 43073550 -210183033 - LTR7 LTR ERV1 0 450 1 279 0 0 0 chr2 43074039 43074070 -210182513 + (CA)n Simple_repeat Simple_repeat 2 32 0 1673 149 43 25 chr2 43074276 43074652 -210181931 + Tigger3(Golem) DNA MER2_type 1 3029 0 2726 153 19 0 chr2 43075282 43075751 -210180832 + L1MB3 LINE L1 5697 6174 -9 21 0 0 0 chr2 43076235 43076256 -210180327 + AT_rich Low_complexity Low_complexity 1 21 0 4510 149 5 32 chr2 43078590 43079098 -210177485 + L1PA12 LINE L1 4787 5307 -861 2301 89 0 7 chr2 43079098 43079401 -210177182 + AluSg1 SINE Alu 1 301 -8 4510 149 5 32 chr2 43079401 43080092 -210176491 + L1PA12 LINE L1 5307 5958 -210 7948 136 18 2 chr2 43080260 43081537 -210175046 + HSMAR2 DNA Mariner 4 1300 -2 2194 140 0 0 chr2 43082309 43082617 -210173966 - AluSx SINE Alu -4 308 1 1292 131 0 0 chr2 43082912 43083088 -210173495 - AluSx SINE Alu -136 176 1 2333 174 13 7 chr2 43083365 43083819 -210172764 + L1MA8 LINE L1 5825 6281 -10 1369 114 50 23 chr2 43084074 43084293 -210172290 - MER30 DNA MER1_type -4 226 2 24 0 0 0 chr2 43087155 43087179 -210169404 + AT_rich Low_complexity Low_complexity 1 24 0 2311 108 0 3 chr2 43087232 43087537 -210169046 + AluSg SINE Alu 1 304 -6 3473 132 9 17 chr2 43087734 43088265 -210168318 - MER1A DNA MER1_type 0 527 1 4144 153 42 46 chr2 43089152 43090119 -210166464 + pTR5 LTR ERV1 741 2025 -413 274 255 31 20 chr2 43090119 43090217 -210166366 + LTR30 LTR ERV1 544 642 -80 1483 101 4 9 chr2 43090220 43090447 -210166136 + pTR5 LTR ERV1 172 397 -2041 2203 114 7 3 chr2 43090724 43091030 -210165553 + AluSg SINE Alu 1 307 -3 1880 208 109 36 chr2 43091042 43091509 -210165074 + MLT1D LTR MaLR 4 504 -1 230 293 91 0 chr2 43091614 43091713 -210164870 - L2 LINE L2 -199 3073 2966 379 208 9 9 chr2 43091713 43091819 -210164764 + G-rich Low_complexity Low_complexity 5 110 0 25 75 0 0 chr2 43093202 43093255 -210163328 + AT_rich Low_complexity Low_complexity 1 53 0 25 0 0 0 chr2 43093628 43093653 -210162930 + AT_rich Low_complexity Low_complexity 1 25 0 722 119 0 0 chr2 43095690 43095799 -210160784 - L1P LINE L1 -1156 4990 4882 4761 60 2 20 chr2 43095799 43096433 -210160150 + L1PA8 LINE L1 5546 6171 -1 5424 109 16 22 chr2 43096647 43097534 -210159049 - L1MA5A LINE L1 -5 6292 5412 1236 219 32 74 chr2 43100972 43101501 -210155082 - Charlie4a DNA MER1_type 0 508 2 564 272 36 28 chr2 43101531 43101583 -210155000 - L1ME LINE L1 -580 5582 5532 388 77 0 240 chr2 43101583 43101687 -210154896 + MADE1 DNA Mariner 2 80 0 564 272 36 28 chr2 43101687 43101934 -210154649 - L1ME LINE L1 -630 5532 5260 504 244 8 25 chr2 43102149 43102322 -210154261 - MER63A DNA MER1_type 0 210 39 578 303 106 24 chr2 43102427 43103180 -210153403 - L1ME LINE L1 -1230 4916 4102 337 338 67 13 chr2 43103375 43103911 -210152672 - L1ME LINE L1 -2283 3863 3299 746 231 38 71 chr2 43104113 43104351 -210152232 + MLT1D LTR MaLR 1 230 -275 702 191 21 14 chr2 43104349 43104490 -210152093 + MLT1D LTR MaLR 364 505 0 * 22 0 0 0 chr2 43104583 43104605 -210151978 + AT_rich Low_complexity Low_complexity 1 22 0 513 0 0 0 chr2 43104972 43105029 -210151554 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 410 306 32 12 chr2 43105104 43105156 -210151427 - L1ME LINE L1 -3759 2387 2338 1806 164 14 0 chr2 43105156 43105443 -210151140 - AluSx SINE Alu -19 293 3 410 306 32 12 chr2 43105443 43105642 -210150941 - L1ME LINE L1 -3808 2338 2131 228 351 34 34 chr2 43107552 43107700 -210148883 - MIR SINE MIR -92 170 23 237 287 223 0 chr2 43107824 43107981 -210148602 - MIR SINE MIR -63 199 8 199 291 55 73 chr2 43108048 43108158 -210148425 + MIR3 SINE MIR 95 202 -6 21 0 0 0 chr2 43108173 43108194 -210148389 + AT_rich Low_complexity Low_complexity 1 21 0 275 240 13 13 chr2 43108625 43108700 -210147883 + MLT1D LTR MaLR 431 505 0 806 211 56 56 chr2 43108798 43109064 -210147519 + L1MD3 LINE L1 7730 7995 0 2249 118 0 0 chr2 43109109 43109415 -210147168 - AluSg SINE Alu 0 310 5 307 265 21 37 chr2 43109854 43109979 -210146604 - MIR SINE MIR -80 128 28 276 306 174 0 chr2 43110212 43110333 -210146250 + LTR33A LTR ERVL 19 160 -361 198 156 0 0 chr2 43110734 43110779 -210145804 + (CA)n Simple_repeat Simple_repeat 2 46 0 577 262 21 61 chr2 43110891 43111019 -210145564 + Charlie7 DNA MER1_type 1500 1632 -980 2348 90 0 0 chr2 43111019 43111308 -210145275 - AluSc SINE Alu -20 289 1 577 262 21 61 chr2 43111308 43111458 -210145125 + Charlie7 DNA MER1_type 1632 1767 -845 866 305 72 19 chr2 43111680 43112221 -210144362 + L1ME LINE L1 589 1158 -5214 * 30092 57 4 1 chr2 43112219 43116024 -210140559 + L1P LINE L1 2 3816 -2330 4405 32 0 0 chr2 43116024 43116537 -210140046 + L1PA4 LINE L1 5633 6155 0 569 307 53 26 chr2 43116542 43116972 -210139611 + L1ME LINE L1 1042 1483 -4901 234 91 0 0 chr2 43116973 43117006 -210139577 + (CA)n Simple_repeat Simple_repeat 2 34 0 11037 204 33 22 chr2 43117986 43119929 -210136654 + L1PA13 LINE L1 156 2176 -4621 2203 121 0 13 chr2 43119929 43120242 -210136341 + AluSc SINE Alu 1 309 0 11037 204 33 22 chr2 43120242 43121370 -210135213 + L1PA13 LINE L1 2176 3290 -3507 2278 138 5 36 chr2 43121370 43121493 -210135090 - THE1C LTR MaLR 0 375 250 2194 134 0 3 chr2 43121493 43121806 -210134777 + AluSx SINE Alu 1 312 0 2278 138 5 36 chr2 43121806 43122067 -210134516 - THE1C LTR MaLR -125 250 3 8213 127 18 68 chr2 43122069 43123449 -210133134 - THE1C-int LTR MaLR 0 1580 272 2378 86 3 0 chr2 43123449 43123741 -210132842 + AluY SINE Alu 2 294 -17 8213 127 18 68 chr2 43123741 43123787 -210132796 - THE1C-int LTR MaLR -1308 272 225 * 11456 176 16 18 chr2 43123785 43126816 -210129767 + L1PA13 LINE L1 3789 6810 -4 23 33 0 0 chr2 43126818 43126848 -210129735 + AT_rich Low_complexity Low_complexity 1 30 0 2326 108 0 6 chr2 43127337 43127651 -210128932 - AluSx SINE Alu 0 312 1 255 260 55 62 chr2 43127692 43127838 -210128745 - L2 LINE L2 -7 3306 3162 273 391 161 0 chr2 43127871 43128150 -210128433 - L2 LINE L2 -337 2977 2654 280 235 306 0 chr2 43128450 43128548 -210128035 + MER63 DNA MER1_type 12 765 -71 950 191 41 20 chr2 43128604 43128850 -210127733 - L1M4 LINE L1 -946 5200 4950 536 227 163 64 chr2 43128976 43129351 -210127232 - LTR37B LTR ERV1 -6 462 51 1110 193 20 0 chr2 43130607 43130851 -210125732 - L1MA8 LINE L1 -4 6287 6039 2082 149 0 0 chr2 43131290 43131598 -210124985 + AluSx SINE Alu 1 308 -4 303 360 0 0 chr2 43131768 43131868 -210124715 + MIR3 SINE MIR 87 186 -22 417 296 90 16 chr2 43131944 43132133 -210124450 - LTR16A LTR ERVL -5 445 243 17279 31 0 0 chr2 43132133 43134226 -210122357 - L1PA3 LINE L1 -1755 4391 2299 8300 27 2 0 chr2 43134226 43135975 -210120608 + L1PA3 LINE L1 4405 6154 -1 763 280 11 5 chr2 43135975 43136164 -210120419 - LTR16A LTR ERVL -195 255 66 219 278 189 0 chr2 43136668 43136758 -210119825 - L2 LINE L2 -6 3307 3201 2093 113 3 0 chr2 43137342 43137646 -210118937 + AluSg SINE Alu 1 305 0 1235 310 96 47 chr2 43137657 43138462 -210118121 + L2 LINE L2 1770 2629 -685 969 204 63 47 chr2 43138462 43138717 -210117866 + MIR SINE MIR 2 260 -2 1235 310 96 47 chr2 43138717 43138862 -210117721 + L2 LINE L2 2629 2766 -548 252 248 223 13 chr2 43138934 43139091 -210117492 + L2 LINE L2 3124 3313 0 198 103 0 0 chr2 43139868 43139897 -210116686 + (TAA)n Simple_repeat Simple_repeat 1 29 0 507 257 63 53 chr2 43139910 43140116 -210116467 - MIR SINE MIR -21 241 34 180 287 119 59 chr2 43140304 43140405 -210116178 - L2 LINE L2 -174 3098 2992 193 57 57 0 chr2 43141203 43141238 -210115345 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 384 284 63 16 chr2 43141617 43141744 -210114839 + MIR3 SINE MIR 71 203 -5 2230 109 3 3 chr2 43142355 43142657 -210113926 - AluSx SINE Alu -10 302 1 221 255 20 20 chr2 43142966 43143017 -210113566 + L2 LINE L2 3207 3257 -15 21 36 0 0 chr2 43143177 43143205 -210113378 + AT_rich Low_complexity Low_complexity 1 28 0 488 246 87 7 chr2 43143319 43143457 -210113126 - MIR SINE MIR -1 261 113 2042 173 3 0 chr2 43143476 43143806 -210112777 - MLT1A1 LTR MaLR -34 331 1 287 330 44 0 chr2 43143825 43143916 -210112667 - MIR SINE MIR -166 96 2 349 234 62 31 chr2 43145717 43145845 -210110738 - L1MC4a LINE L1 -1894 5914 5783 21 0 0 0 chr2 43145857 43145878 -210110705 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr2 43146035 43146078 -210110505 + AT_rich Low_complexity Low_complexity 1 43 0 370 346 19 38 chr2 43146170 43146381 -210110202 - HAL1b LINE L1 -477 871 665 288 337 83 37 chr2 43146456 43146756 -210109827 - HAL1b LINE L1 -782 566 253 180 0 0 0 chr2 43147085 43147105 -210109478 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1849 160 50 16 chr2 43147554 43147917 -210108666 + THE1C LTR MaLR 1 375 0 8328 144 12 37 chr2 43147919 43149345 -210107238 + THE1C-int LTR MaLR 3 1392 -188 434 70 0 56 chr2 43149345 43149416 -210107167 + THE1C-int LTR MaLR 1514 1580 0 1825 136 43 59 chr2 43149416 43149791 -210106792 + THE1C LTR MaLR 1 369 -6 349 285 133 19 chr2 43150386 43150649 -210105934 - L1M4 LINE L1 -1827 4319 4027 227 139 14 42 chr2 43152471 43152543 -210104040 + CT-rich Low_complexity Low_complexity 4 73 0 12951 146 8 8 chr2 43152706 43156568 -210100015 + HERVH LTR ERV1 2294 6091 -1622 4804 153 8 6 chr2 43156554 43157353 -210099230 + HERVH LTR ERV1 6914 7713 0 * 1184 207 96 40 chr2 43157353 43157779 -210098804 + LTR7 LTR ERV1 1 450 0 1294 276 30 21 chr2 43158141 43158575 -210098008 + L1ME1 LINE L1 66 503 -5893 2530 231 64 34 chr2 43158582 43159730 -210096853 + L1ME1 LINE L1 5050 6231 -4 552 276 35 22 chr2 43159959 43160191 -210096392 - L1MB8 LINE L1 -32 6146 5912 500 194 32 48 chr2 43160192 43160316 -210096267 - L1MD2 LINE L1 -109 6250 6129 479 279 28 48 chr2 43160291 43160542 -210096041 - L1M4c LINE L1 -4704 1680 1435 * 256 263 88 91 chr2 43160868 43161738 -210094845 + L1M4 LINE L1 4472 5339 -807 22 0 0 0 chr2 43162126 43162148 -210094435 + AT_rich Low_complexity Low_complexity 1 22 0 432 240 19 0 chr2 43163149 43163253 -210093330 - MER117 DNA MER1_type -91 106 1 221 282 113 48 chr2 43163265 43163389 -210093194 + MIR SINE MIR 65 196 -66 24 85 0 0 chr2 43163475 43163534 -210093049 + AT_rich Low_complexity Low_complexity 1 59 0 2126 181 18 0 chr2 43163546 43163945 -210092638 - L1MB2 LINE L1 0 6171 5766 3162 203 21 32 chr2 43163992 43165192 -210091391 - L1MB8 LINE L1 -362 5809 4629 296 288 17 34 chr2 43166926 43167044 -210089539 + GA-rich Low_complexity Low_complexity 1 116 0 2550 170 43 4 chr2 43167086 43167599 -210088984 - L1MA5A LINE L1 -3 6294 5762 1725 151 56 22 chr2 43167600 43167924 -210088659 - THE1C LTR MaLR -40 335 1 3108 146 31 55 chr2 43167925 43168090 -210088493 - L1MA5A LINE L1 -549 5748 5581 2191 135 34 63 chr2 43168090 43168535 -210088048 - MSTB1 LTR MaLR 0 432 1 3108 146 31 55 chr2 43168535 43169457 -210087126 - L1MA5A LINE L1 -716 5581 4688 2200 169 39 8 chr2 43169455 43169941 -210086642 + L1MA5A LINE L1 4189 4689 -1457 * 239 333 58 42 chr2 43170871 43170991 -210085592 - MIR SINE MIR -72 190 69 487 279 25 8 chr2 43171285 43171407 -210085176 - MIR SINE MIR -65 143 20 262 288 14 0 chr2 43172439 43172512 -210084071 + L2 LINE L2 3238 3311 -2 805 194 106 0 chr2 43173629 43173789 -210082794 + MER45A DNA AcHobo 2 178 0 299 303 0 0 chr2 43174308 43174384 -210082199 + MIR SINE MIR 187 262 0 273 326 70 16 chr2 43174521 43174650 -210081933 + MIR SINE MIR 113 248 -14 4187 130 8 0 chr2 43174783 43175390 -210081193 - LTR9 LTR ERV1 0 612 1 222 261 77 0 chr2 43175408 43175473 -210081110 + L2 LINE L2 2979 3048 -224 401 313 67 7 chr2 43175611 43175761 -210080822 + MLT1G1 LTR MaLR 25 183 -412 342 161 46 0 chr2 43175767 43175854 -210080729 + GA-rich Low_complexity Low_complexity 4 94 0 2136 143 60 5 chr2 43175950 43176320 -210080263 - L1M2 LINE L1 -570 5742 5353 220 250 26 0 chr2 43177480 43177556 -210079027 + (TA)n Simple_repeat Simple_repeat 1 78 0 707 81 0 0 chr2 43179108 43179207 -210077376 - L1MA2 LINE L1 0 6304 6206 1098 236 5 5 chr2 43179207 43179419 -210077164 - L1M1 LINE L1 -5967 1598 1387 2348 246 68 60 chr2 43179430 43180554 -210076029 - L1M2 LINE L1 -785 5361 4187 259 284 118 8 chr2 43180584 43180711 -210075872 + HAL1 LINE L1 10 150 -2357 2095 230 58 6 chr2 43180740 43181223 -210075360 + LTR53 LTR ERVL 1 508 -11 443 321 128 22 chr2 43181282 43181649 -210074934 + HAL1 LINE L1 270 675 -1832 1799 216 2 62 chr2 43181654 43182013 -210074570 + MLT2D LTR ERVL 6 336 -78 189 0 0 0 chr2 43182013 43182034 -210074549 + (TC)n Simple_repeat Simple_repeat 2 22 0 1799 216 2 62 chr2 43182034 43182109 -210074474 + MLT2D LTR ERVL 336 414 0 981 207 57 0 chr2 43182193 43182386 -210074197 + MER20 DNA MER1_type 1 204 -15 454 275 96 33 chr2 43182789 43183029 -210073554 + HAL1 LINE L1 1502 1756 -751 403 276 88 35 chr2 43183031 43183259 -210073324 + HAL1 LINE L1 1838 2077 -430 2439 64 0 0 chr2 43183270 43183566 -210073017 + AluY SINE Alu 1 296 -15 966 184 26 0 chr2 43183789 43183979 -210072604 + MSTD LTR MaLR 198 392 -4 1945 107 24 7 chr2 43184166 43184456 -210072127 - AluSc SINE Alu -14 295 1 23 33 0 0 chr2 43184590 43184620 -210071963 + AT_rich Low_complexity Low_complexity 1 30 0 724 171 44 25 chr2 43186555 43186713 -210069870 + LTR41 LTR ERVL 1 161 -612 394 224 211 36 chr2 43187120 43187343 -210069240 + LTR41 LTR ERVL 506 767 -6 280 298 242 6 chr2 43187401 43187562 -210069021 - MIR SINE MIR -13 249 51 27 29 0 0 chr2 43188334 43188368 -210068215 + AT_rich Low_complexity Low_complexity 1 34 0 261 326 41 0 chr2 43188897 43188995 -210067588 - MIR3 SINE MIR -12 196 95 230 139 93 0 chr2 43189021 43189064 -210067519 - MLT2C2 LTR ERVL 0 464 418 342 0 0 0 chr2 43189066 43189104 -210067479 + (TG)n Simple_repeat Simple_repeat 2 39 0 444 231 103 0 chr2 43189137 43189254 -210067329 - MLT2B1 LTR ERVL -31 489 361 3142 160 11 15 chr2 43189254 43189797 -210066786 - ERVL LTR ERVL -274 5490 4950 579 308 45 29 chr2 43189975 43190352 -210066231 - L1MC/D LINE L1 -2109 5699 5317 1777 203 15 25 chr2 43190773 43191172 -210065411 + L1MD3 LINE L1 7431 7825 -170 250 237 112 124 chr2 43191220 43191558 -210065025 - L1ME LINE L1 -225 5896 5563 790 195 129 9 chr2 43191715 43191816 -210064767 - L1MA9 LINE L1 -38 6274 6186 221 57 29 0 chr2 43191816 43191851 -210064732 + (TG)n Simple_repeat Simple_repeat 1 36 0 790 195 129 9 chr2 43191851 43191959 -210064624 - L1MA9 LINE L1 -126 6186 6040 4613 170 27 75 chr2 43192725 43193218 -210063365 - L1MA9 LINE L1 -10 6302 5787 2331 132 25 0 chr2 43193218 43193583 -210063000 + THE1C LTR MaLR 2 375 0 4613 170 27 75 chr2 43193583 43193609 -210062974 - L1MA9 LINE L1 -525 5787 5761 243 0 0 0 chr2 43193609 43193636 -210062947 + (TG)n Simple_repeat Simple_repeat 2 28 0 4613 170 27 75 chr2 43193636 43194943 -210061640 - L1MA9 LINE L1 -551 5761 4565 2613 175 35 1 chr2 43194940 43195636 -210060947 - L1PB1 LINE L1 -681 5470 4760 * 4628 102 15 3 chr2 43195636 43196310 -210060273 + L1PB1 LINE L1 5465 6149 -2 387 275 300 33 chr2 43196418 43196490 -210060093 - L1MEd LINE L1 -5611 508 456 1878 150 0 19 chr2 43196490 43196797 -210059786 - AluSx SINE Alu -9 303 3 387 275 300 33 chr2 43196797 43197121 -210059462 - L1MEd LINE L1 -5663 456 6 359 250 95 34 chr2 43197174 43197233 -210059350 - L1MA10 LINE L1 0 6334 6276 1643 234 29 17 chr2 43197233 43197652 -210058931 - L1ME1 LINE L1 -56 6110 5687 539 193 49 8 chr2 43197669 43197844 -210058739 - L1MA9 LINE L1 -1568 4578 4397 * 649 239 5 16 chr2 43197814 43197998 -210058585 - L1MA9 LINE L1 -1661 4485 4304 * 2973 215 24 1 chr2 43197989 43198692 -210057891 + L1 LINE L1 3199 3917 -2229 2115 231 12 20 chr2 43198842 43199344 -210057239 - LTR31 LTR ERV1 -17 602 105 377 303 49 37 chr2 43200138 43200300 -210056283 + MIR3 SINE MIR 39 202 -6 23 54 0 0 chr2 43200879 43200916 -210055667 + AT_rich Low_complexity Low_complexity 1 37 0 236 208 0 0 chr2 43201069 43201117 -210055466 + MER116 DNA Mariner 5 52 -28 213 39 0 0 chr2 43202218 43202244 -210054339 + (TAGA)n Simple_repeat Simple_repeat 3 28 0 344 300 89 32 chr2 43202244 43202425 -210054158 - L1M4 LINE L1 -1537 4609 4415 35 24 0 0 chr2 43202448 43202490 -210054093 + AT_rich Low_complexity Low_complexity 1 42 0 2008 135 0 7 chr2 43202555 43202859 -210053724 + AluSx SINE Alu 1 302 -10 223 329 61 0 chr2 43202874 43202956 -210053627 - MIR SINE MIR -108 154 68 212 51 0 51 chr2 43204690 43204729 -210051854 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 4755 11 2 4 chr2 43205071 43205616 -210050967 - L1PA3 LINE L1 -3 6152 5609 21263 159 29 16 chr2 43207720 43215331 -210041252 - L1MA1 LINE L1 0 7721 6 22 0 0 0 chr2 43215419 43215441 -210041142 + AT_rich Low_complexity Low_complexity 1 22 0 488 329 30 17 chr2 43215573 43215871 -210040712 + L1MC4 LINE L1 5581 5882 -1926 25 51 0 0 chr2 43216045 43216084 -210040499 + AT_rich Low_complexity Low_complexity 1 39 0 25 51 0 0 chr2 43216143 43216182 -210040401 + AT_rich Low_complexity Low_complexity 1 39 0 309 324 34 28 chr2 43220028 43220207 -210036376 - L2 LINE L2 -932 2382 2203 244 209 0 0 chr2 43220914 43220957 -210035626 - L2 LINE L2 -84 3229 3187 1096 188 32 28 chr2 43221650 43221868 -210034715 - MER20 DNA MER1_type 0 219 1 23 54 0 0 chr2 43222001 43222038 -210034545 + AT_rich Low_complexity Low_complexity 1 37 0 3098 147 59 4 chr2 43222577 43223101 -210033482 - MER41C LTR ERV1 0 554 2 211 137 68 0 chr2 43223326 43223399 -210033184 + (TA)n Simple_repeat Simple_repeat 2 79 0 378 190 20 0 chr2 43223996 43224096 -210032487 - L1MA8 LINE L1 -4 6287 6186 31 0 0 0 chr2 43226146 43226177 -210030406 + AT_rich Low_complexity Low_complexity 1 31 0 289 304 141 15 chr2 43226518 43226653 -210029930 + MIR SINE MIR 39 190 -72 1583 204 75 46 chr2 43226852 43227738 -210028845 + L1MD2 LINE L1 5269 6141 -218 331 303 0 0 chr2 43228289 43228378 -210028205 - L1MC4 LINE L1 -1339 6703 6615 239 244 35 0 chr2 43228389 43228475 -210028108 - L1MC4 LINE L1 -1339 6703 6615 226 277 0 11 chr2 43228391 43228485 -210028098 + L1MC4 LINE L1 6614 6706 -1336 * 1289 230 94 38 chr2 43230643 43231188 -210025395 - MLT1F1 LTR MaLR 0 567 5 216 135 0 0 chr2 43231241 43231278 -210025305 + (TA)n Simple_repeat Simple_repeat 1 37 0 1565 170 31 9 chr2 43231440 43231763 -210024820 + MER2 DNA MER2_type 2 331 -14 240 204 0 37 chr2 43232461 43232515 -210024068 + MIR SINE MIR 80 131 -131 635 241 0 6 chr2 43232916 43233074 -210023509 - L1PA15 LINE L1 -1 6164 6008 710 202 65 65 chr2 43234008 43234270 -210022313 - MER63C DNA MER1_type -2 928 667 1666 201 37 124 chr2 43234271 43234941 -210021642 + LTR9 LTR ERV1 1 612 0 4498 182 43 25 chr2 43234941 43236589 -210019994 + HUERS-P3 LTR ERV1 1 1747 -5671 17099 188 48 26 chr2 43236607 43239471 -210017112 + HUERS-P3 LTR ERV1 2033 4970 -2597 2323 104 7 0 chr2 43239471 43239780 -210016803 - AluY SINE Alu 0 311 1 17099 188 48 26 chr2 43239780 43241848 -210014735 + HUERS-P3 LTR ERV1 4970 6991 -576 987 124 11 16 chr2 43241832 43242017 -210014566 + HUERS-P3 LTR ERV1 3945 4128 -3688 * 1430 156 23 19 chr2 43242231 43242488 -210014095 + HUERS-P3 LTR ERV1 8659 8916 -3 1412 212 7 76 chr2 43242493 43242913 -210013670 + LTR9 LTR ERV1 1 391 -221 570 252 51 65 chr2 43242884 43243043 -210013540 + LTR9 LTR ERV1 323 478 -134 * 2215 107 0 0 chr2 43243043 43243332 -210013251 - AluY SINE Alu -19 292 4 570 252 51 65 chr2 43243332 43243466 -210013117 + LTR9 LTR ERV1 478 612 0 * 1530 150 111 171 chr2 43243466 43244178 -210012405 - MER63C DNA MER1_type -261 669 1 429 380 157 3 chr2 43244567 43244885 -210011698 - L3 LINE CR1 -353 1224 858 515 236 65 0 chr2 43245407 43245530 -210011053 - MIR SINE MIR -86 176 46 21 36 0 0 chr2 43246920 43246948 -210009635 + AT_rich Low_complexity Low_complexity 1 28 0 272 273 15 15 chr2 43246972 43247038 -210009545 - L2 LINE L2 -27 3245 3180 2437 63 7 0 chr2 43248314 43248615 -210007968 + AluY SINE Alu 1 303 -8 303 28 0 0 chr2 43249772 43249808 -210006775 + (CA)n Simple_repeat Simple_repeat 1 36 0 2098 127 10 3 chr2 43300799 43301107 -209955476 - AluSx SINE Alu -2 310 1 2142 138 0 0 chr2 43302713 43303010 -209953573 - AluSx SINE Alu -15 297 1 769 338 82 14 chr2 43303530 43304117 -209952466 - L2 LINE L2 -16 3297 2680 303 250 97 48 chr2 43304840 43304964 -209951619 - MIR SINE MIR -71 191 62 189 0 0 0 chr2 43305431 43305452 -209951131 + (T)n Simple_repeat Simple_repeat 1 21 0 357 364 59 17 chr2 43306011 43306129 -209950454 - L2 LINE L2 -2 3270 3148 226 234 0 0 chr2 43306411 43306458 -209950125 + (CTATT)n Simple_repeat Simple_repeat 3 49 0 2268 82 0 23 chr2 43306716 43307019 -209949564 + AluY SINE Alu 3 298 -13 1603 192 14 10 chr2 43307400 43307691 -209948892 + AluJo SINE Alu 1 292 -20 2059 134 0 22 chr2 43307880 43308194 -209948389 - AluSg SINE Alu -3 307 1 484 341 124 38 chr2 43308444 43308863 -209947720 + L2 LINE L2 2818 3272 0 307 351 20 14 chr2 43309293 43309441 -209947142 - MIR3 SINE MIR -12 196 48 265 182 64 47 chr2 43309880 43309982 -209946601 - MLT1G LTR MaLR -18 572 431 291 54 0 0 chr2 43310063 43310100 -209946483 + (TG)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr2 43310945 43310978 -209945605 + AT_rich Low_complexity Low_complexity 1 33 0 242 145 101 14 chr2 43311038 43311107 -209945476 - L1MA3 LINE L1 0 6305 6231 * 842 140 30 1 chr2 43311046 43311206 -209945377 + L1MA2 LINE L1 5835 5958 -203 373 208 0 0 chr2 43311211 43311283 -209945300 - MER94 DNA DNA -60 74 3 630 211 26 26 chr2 43313351 43313503 -209943080 + L1MB7 LINE L1 6016 6167 -17 10095 16 0 0 chr2 43313716 43315675 -209940908 - L1HS LINE L1 0 6155 4197 * 14598 24 0 0 chr2 43315671 43317413 -209939170 + L1HS LINE L1 2460 4201 -1945 10100 180 31 2 chr2 43317438 43319572 -209937011 - L1P5 LINE L1 -583 5573 3379 13088 212 56 4 chr2 43319668 43323257 -209933326 + L1 LINE L1 1524 5288 -858 2540 57 0 0 chr2 43323641 43323940 -209932643 + AluY SINE Alu 1 299 -12 1031 31 0 8 chr2 43323940 43324069 -209932514 + L1PB1 LINE L1 6022 6149 -2 398 264 64 18 chr2 43324069 43324179 -209932404 - MER5B DNA MER1_type -61 117 3 305 330 153 48 chr2 43326229 43326294 -209930289 + L2 LINE L2 1276 1333 -1981 2123 108 0 40 chr2 43326294 43326618 -209929965 - AluSx SINE Alu -1 311 1 305 330 153 48 chr2 43326618 43327729 -209928854 + L2 LINE L2 1333 2575 -739 336 384 24 76 chr2 43327889 43328178 -209928405 + L2 LINE L2 2997 3270 -2 1115 322 32 26 chr2 43328948 43329454 -209927129 - L2 LINE L2 0 3313 2805 249 308 95 80 chr2 43330372 43330889 -209925694 + L2 LINE L2 2301 2830 -484 2592 45 0 6 chr2 43330889 43331202 -209925381 - AluY SINE Alu 0 311 1 249 308 95 80 chr2 43331202 43331284 -209925299 + L2 LINE L2 2830 2909 -405 232 179 0 0 chr2 43331446 43331485 -209925098 - L2 LINE L2 -1 3312 3274 210 208 0 0 chr2 43333243 43333296 -209923287 + (CA)n Simple_repeat Simple_repeat 2 54 0 354 280 11 11 chr2 43334132 43334225 -209922358 + MIR SINE MIR 24 116 -92 566 318 28 37 chr2 43334225 43334442 -209922141 - MIR SINE MIR -1 261 47 572 217 7 35 chr2 43334490 43334633 -209921950 + L2 LINE L2 3170 3308 -5 969 322 93 16 chr2 43334982 43335488 -209921095 - L3 LINE CR1 -443 1134 590 695 290 46 8 chr2 43336155 43336414 -209920169 + LTR16C LTR ERVL 217 485 -6 268 325 0 0 chr2 43337617 43337697 -209918886 + MIR SINE MIR 64 143 -119 264 287 213 9 chr2 43338177 43338285 -209918298 + L2 LINE L2 3141 3270 -2 21 0 0 0 chr2 43338606 43338627 -209917956 + AT_rich Low_complexity Low_complexity 1 21 0 225 282 14 14 chr2 43340633 43340704 -209915879 + MIR3 SINE MIR 103 173 -35 1071 228 37 8 chr2 43340984 43341225 -209915358 + L1MCa LINE L1 4 251 -6175 2400 67 3 0 chr2 43341684 43341982 -209914601 - AluY SINE Alu -12 299 1 194 315 108 15 chr2 43341982 43342112 -209914471 + MIR SINE MIR 77 218 -44 232 350 181 19 chr2 43342740 43342900 -209913683 - L3 LINE CR1 -1 1576 1391 2294 107 0 3 chr2 43344048 43344357 -209912226 + AluSc SINE Alu 1 308 -1 550 286 0 0 chr2 43344860 43344972 -209911611 - L2 LINE L2 -1 3271 3160 15724 194 127 18 chr2 43346079 43350227 -209906356 + L1PA12 LINE L1 1029 6439 -1145 229 81 135 0 chr2 43350243 43350280 -209906303 + L1PA13 LINE L1 6119 6160 -3 23 33 0 0 chr2 43350280 43350310 -209906273 + AT_rich Low_complexity Low_complexity 1 30 0 432 348 69 20 chr2 43350622 43350869 -209905714 + MIR SINE MIR 3 261 -1 4502 155 35 9 chr2 43351093 43351910 -209904673 - L1PB4 LINE L1 -3 6153 5315 23 33 0 0 chr2 43352033 43352063 -209904520 + AT_rich Low_complexity Low_complexity 1 30 0 196 174 109 0 chr2 43352073 43352119 -209904464 + MER5B DNA MER1_type 106 156 -22 777 308 77 6 chr2 43353890 43354215 -209902368 + L1M2 LINE L1 103 450 -6399 1543 159 39 0 chr2 43354336 43354669 -209901914 + L1 LINE L1 3076 3421 -2725 1366 275 90 30 chr2 43355177 43355890 -209900693 + L1MC4 LINE L1 7122 7877 -165 287 161 0 16 chr2 43355902 43355964 -209900619 + GA-rich Low_complexity Low_complexity 1 61 0 194 261 197 58 chr2 43356072 43356260 -209900323 + L3b LINE CR1 1284 1497 -86 253 246 167 38 chr2 43357964 43358252 -209898331 - L1MC4a LINE L1 -1630 6178 5854 548 89 13 0 chr2 43360115 43360194 -209896389 - MADE1 DNA Mariner 0 80 1 207 176 0 0 chr2 43360220 43360254 -209896329 + MIR SINE MIR 159 192 -70 249 332 99 58 chr2 43362275 43362498 -209894085 + LTR67 LTR ERVL 43 274 -283 302 241 54 9 chr2 43362505 43362617 -209893966 - MER104 DNA Tc2 -63 117 1 240 272 88 8 chr2 43364548 43364673 -209891910 + L1ME4a LINE L1 5975 6109 -12 2747 154 68 6 chr2 43364982 43365529 -209891054 - L1MA7 LINE L1 0 6291 5711 319 280 125 36 chr2 43365529 43365697 -209890886 + MIR SINE MIR 66 248 -14 373 281 101 14 chr2 43365761 43365900 -209890683 - MIR SINE MIR -28 234 84 213 94 0 0 chr2 43366447 43366479 -209890104 + (TA)n Simple_repeat Simple_repeat 1 32 0 10780 37 12 1 chr2 43366481 43368580 -209888003 - L1PA5 LINE L1 -3 6151 4045 448 324 35 12 chr2 43369126 43369296 -209887287 + MIR3 SINE MIR 26 199 -9 292 317 129 32 chr2 43369917 43370258 -209886325 + LTR33 LTR ERVL 134 507 -14 1499 174 12 0 chr2 43370263 43370505 -209886078 + Tigger3(Golem) DNA MER2_type 2790 3034 0 227 320 82 51 chr2 43372406 43372662 -209883921 + L2 LINE L2 1893 2156 -1158 594 385 82 11 chr2 43373520 43373884 -209882699 + MLT1K LTR MaLR 27 416 -172 21 0 0 0 chr2 43374566 43374587 -209881996 + AT_rich Low_complexity Low_complexity 1 21 0 2295 114 0 0 chr2 43375170 43375476 -209881107 + AluSg SINE Alu 1 306 -4 195 205 0 26 chr2 43375718 43375757 -209880826 - MIR SINE MIR -88 120 83 594 175 8 42 chr2 43376174 43376294 -209880289 - MER58A DNA MER1_type -8 216 101 1865 230 36 34 chr2 43376301 43376829 -209879754 - MER41B LTR ERV1 -12 597 114 504 274 0 0 chr2 43376829 43376931 -209879652 - MER58A DNA MER1_type -2 105 4 323 291 40 54 chr2 43377542 43377677 -209878906 - L2 LINE L2 0 3313 3179 207 0 0 0 chr2 43377677 43377700 -209878883 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 323 291 40 54 chr2 43377700 43377712 -209878871 - L2 LINE L2 -134 3179 3168 3180 285 45 41 chr2 43377766 43379042 -209877541 - L2 LINE L2 -289 3024 1728 196 253 89 25 chr2 43379417 43379496 -209877087 - L2 LINE L2 -4 3309 3226 24 0 0 0 chr2 43380303 43380327 -209876256 + AT_rich Low_complexity Low_complexity 1 24 0 210 258 142 33 chr2 43380501 43380621 -209875962 - L2 LINE L2 -2 3311 3179 35 0 0 0 chr2 43380670 43380705 -209875878 + AT_rich Low_complexity Low_complexity 1 35 0 216 182 0 0 chr2 43380900 43380944 -209875639 + CT-rich Low_complexity Low_complexity 2 45 0 213 39 0 0 chr2 43380944 43380970 -209875613 + (CA)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr2 43383417 43383439 -209873144 + AT_rich Low_complexity Low_complexity 1 22 0 212 366 125 36 chr2 43383925 43384565 -209872018 - L2 LINE L2 -654 2660 1964 431 247 74 107 chr2 43384745 43385016 -209871567 + MLT1I LTR MaLR 63 300 -109 279 176 0 153 chr2 43384996 43385127 -209871456 + MLT1I LTR MaLR 317 541 -8 * 3265 127 8 21 chr2 43387409 43387930 -209868653 + MER75 DNA T2_type 1 514 0 27 29 0 0 chr2 43388133 43388167 -209868416 + AT_rich Low_complexity Low_complexity 1 34 0 272 284 147 18 chr2 43388538 43388647 -209867936 + L2 LINE L2 3142 3264 -8 2320 113 0 0 chr2 43388721 43389030 -209867553 - AluSx SINE Alu -3 309 1 1600 209 94 92 chr2 43389378 43389776 -209866807 - MLT1F1 LTR MaLR 0 567 141 2256 114 3 3 chr2 43389776 43390084 -209866499 + AluSx SINE Alu 3 310 -2 1600 209 94 92 chr2 43390084 43390216 -209866367 - MLT1F1 LTR MaLR -426 141 11 204 412 20 0 chr2 43390772 43390874 -209865709 + MER5A DNA MER1_type 13 116 -73 2016 181 31 28 chr2 43391551 43392106 -209864477 + MLT2A2 LTR ERVL 1 554 0 524 343 54 57 chr2 43392440 43393209 -209863374 - L2 LINE L2 -6 3307 2364 2178 157 98 3 chr2 43395179 43395568 -209861015 + MSTB LTR MaLR 1 426 0 281 235 59 12 chr2 43395992 43396077 -209860506 + MER5B DNA MER1_type 90 178 0 303 190 25 51 chr2 43396090 43396169 -209860414 + L1MC1 LINE L1 5194 5270 -876 4982 142 32 78 chr2 43396190 43397215 -209859368 + L1MC1 LINE L1 5356 6333 0 316 177 269 77 chr2 43397242 43397372 -209859211 + MER5A DNA MER1_type 9 163 -26 658 243 35 18 chr2 43397654 43397823 -209858760 + MER97c DNA MER1_type? 8 179 -911 180 327 220 31 chr2 43398284 43398443 -209858140 + MER5A DNA MER1_type 1 189 0 303 28 0 0 chr2 43398718 43398754 -209857829 + (CA)n Simple_repeat Simple_repeat 1 36 0 326 326 10 0 chr2 43399187 43399285 -209857298 + MIR3 SINE MIR 108 206 -2 362 96 84 12 chr2 43399698 43399781 -209856802 + L1MB4 LINE L1 6086 6174 -6 10442 212 36 53 chr2 43400531 43402243 -209854340 + L1P LINE L1 3 1640 -4506 2255 110 3 0 chr2 43402243 43402543 -209854040 + AluSx SINE Alu 1 301 -11 10442 212 36 53 chr2 43402543 43403867 -209852716 + L1P LINE L1 1640 2986 -3160 4867 49 0 0 chr2 43404742 43405334 -209851249 + L1PA4 LINE L1 5560 6151 -4 223 366 0 12 chr2 43405856 43405938 -209850645 + L2 LINE L2 3184 3264 -8 732 189 8 0 chr2 43406106 43406233 -209850350 + Tigger7 DNA MER2_type 2460 2587 0 24 53 0 0 chr2 43406818 43406856 -209849727 + AT_rich Low_complexity Low_complexity 1 38 0 1405 171 97 40 chr2 43407955 43408276 -209848307 + MER44D DNA MER2_type 1 609 0 25 0 0 0 chr2 43409129 43409154 -209847429 + AT_rich Low_complexity Low_complexity 1 25 0 181 198 23 23 chr2 43409747 43409833 -209846750 + (CATATA)n Simple_repeat Simple_repeat 3 88 0 735 293 34 37 chr2 43410748 43411045 -209845538 + MLT1J LTR MaLR 216 511 0 1217 217 38 61 chr2 43412217 43412609 -209843974 - MLT2C1 LTR ERVL -2 395 13 243 390 21 0 chr2 43413404 43413499 -209843084 + MIR3 SINE MIR 73 169 -39 221 269 19 0 chr2 43413619 43413686 -209842897 + GA-rich Low_complexity Low_complexity 4 110 0 827 251 62 13 chr2 43413741 43413968 -209842615 - Charlie8 DNA MER1_type -2141 276 39 821 119 33 0 chr2 43413982 43414133 -209842450 + MER96B DNA MER1_type? 23 178 -239 238 272 155 60 chr2 43414394 43414626 -209841957 - MIR SINE MIR -3 259 6 190 320 107 25 chr2 43415486 43415608 -209840975 + L2 LINE L2 3179 3310 -3 2244 109 13 0 chr2 43417486 43417789 -209838794 - AluSx SINE Alu -5 307 1 27 49 0 0 chr2 43418182 43418223 -209838360 + AT_rich Low_complexity Low_complexity 1 41 0 198 167 0 0 chr2 43418842 43418878 -209837705 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1383 70 5 0 chr2 43418924 43419109 -209837474 - L1PB1 LINE L1 0 6151 5966 385 241 36 27 chr2 43419454 43419566 -209837017 + MIR3 SINE MIR 89 201 -7 1874 149 187 15 chr2 43420157 43420532 -209836051 + MSTB LTR MaLR 6 425 -1 371 211 49 84 chr2 43421082 43421224 -209835359 - MLT1J LTR MaLR -372 139 3 23 0 0 0 chr2 43421702 43421725 -209834858 + AT_rich Low_complexity Low_complexity 1 23 0 2016 160 68 27 chr2 43421864 43422302 -209834281 + MSTB2 LTR MaLR 1 456 -1 28 48 0 0 chr2 43422347 43422389 -209834194 + AT_rich Low_complexity Low_complexity 1 42 0 23 54 0 0 chr2 43422420 43422457 -209834126 + AT_rich Low_complexity Low_complexity 1 37 0 2114 126 0 16 chr2 43422801 43423118 -209833465 - AluSx SINE Alu 0 312 1 444 90 22 75 chr2 43423588 43423722 -209832861 + (GGAAA)n Simple_repeat Simple_repeat 4 130 0 244 262 84 0 chr2 43423739 43423846 -209832737 + L1MEd LINE L1 87 202 -5917 2571 43 0 3 chr2 43424337 43424637 -209831946 - AluY SINE Alu -12 299 1 21 36 0 0 chr2 43424711 43424739 -209831844 + AT_rich Low_complexity Low_complexity 1 28 0 570 292 35 67 chr2 43425669 43425984 -209830599 - L2 LINE L2 0 3313 3009 311 333 54 0 chr2 43426306 43426417 -209830166 - L2 LINE L2 -7 3306 3190 913 274 0 5 chr2 43426448 43426663 -209829920 - MIR SINE MIR -26 236 23 25 51 0 0 chr2 43427138 43427177 -209829406 + AT_rich Low_complexity Low_complexity 1 39 0 183 279 157 76 chr2 43428217 43428389 -209828194 + MIR SINE MIR 9 194 -68 1744 193 25 50 chr2 43429109 43429432 -209827151 - MSTD LTR MaLR -6 390 77 2215 99 7 0 chr2 43429432 43429725 -209826858 + AluSg SINE Alu 1 295 -15 1744 193 25 50 chr2 43429725 43429801 -209826782 - MSTD LTR MaLR -319 77 1 1281 199 75 126 chr2 43429842 43429905 -209826678 - MLT1D LTR MaLR 0 505 440 410 35 0 0 chr2 43429905 43429962 -209826621 + L1MA7 LINE L1 6235 6291 0 1281 199 75 126 chr2 43429962 43430110 -209826473 - MLT1D LTR MaLR -65 440 286 2467 63 0 0 chr2 43430110 43430413 -209826170 + AluY SINE Alu 1 303 -8 1281 199 75 126 chr2 43430413 43430732 -209825851 - MLT1D LTR MaLR -219 286 1 415 321 43 22 chr2 43430762 43430946 -209825637 + L2 LINE L2 2634 2821 -493 2053 135 3 7 chr2 43430960 43431264 -209825319 - AluSq SINE Alu -10 303 1 277 272 153 61 chr2 43431267 43431495 -209825088 + MER112 DNA MER1_type 12 260 0 423 313 180 39 chr2 43431495 43431901 -209824682 + L2 LINE L2 2851 3313 0 23 54 0 0 chr2 43431964 43432001 -209824582 + AT_rich Low_complexity Low_complexity 1 37 0 393 323 126 6 chr2 43432015 43432182 -209824401 - MIR SINE MIR -2 260 74 415 265 98 15 chr2 43432248 43432380 -209824203 - MIR SINE MIR -104 158 16 221 256 81 0 chr2 43432390 43432476 -209824107 + MER5A DNA MER1_type 4 96 -93 1389 267 63 70 chr2 43432571 43433130 -209823453 - HAL1b LINE L1 -186 1162 613 2139 122 0 3 chr2 43433130 43433424 -209823159 - AluSg SINE Alu -15 295 3 1389 267 63 70 chr2 43433424 43433981 -209822602 - HAL1b LINE L1 -735 613 54 641 335 38 8 chr2 43434969 43435208 -209821375 + MIR SINE MIR 17 262 0 1685 195 35 24 chr2 43435213 43435583 -209821000 - MLT1A2 LTR MaLR 0 374 1 861 288 102 11 chr2 43435778 43436063 -209820520 - L2 LINE L2 0 3313 3003 256 341 188 5 chr2 43436119 43436327 -209820256 - L2 LINE L2 -407 2907 2662 497 294 87 26 chr2 43436927 43437158 -209819425 + MIR SINE MIR 12 256 -6 233 280 119 36 chr2 43437401 43437569 -209819014 - L2 LINE L2 -832 2482 2301 355 305 165 47 chr2 43437674 43437953 -209818630 - L2 LINE L2 -343 2971 2660 1295 200 12 47 chr2 43438256 43438590 -209817993 - L1M3 LINE L1 -648 7105 6794 360 148 0 0 chr2 43438596 43438657 -209817926 + (TA)n Simple_repeat Simple_repeat 2 62 0 2131 199 91 35 chr2 43438657 43439264 -209817319 - L1M3 LINE L1 -762 6803 6163 3003 148 46 28 chr2 43439266 43439880 -209816703 + L1MA10 LINE L1 5710 6334 0 1931 146 3 3 chr2 43439963 43440258 -209816325 + AluSc SINE Alu 5 299 -10 425 219 90 34 chr2 43440323 43440649 -209815934 - LTR37B LTR ERV1 -9 459 114 * 606 161 24 24 chr2 43440646 43440770 -209815813 - MER3 DNA MER1_type -76 133 10 2568 49 3 0 chr2 43440799 43441106 -209815477 + AluY SINE Alu 1 308 -3 2440 91 0 0 chr2 43441130 43441439 -209815144 - AluSg SINE Alu -1 309 1 428 143 29 105 chr2 43441439 43441544 -209815039 - LTR37B LTR ERV1 -371 97 1 242 260 87 29 chr2 43441618 43441722 -209814861 + L1MEd LINE L1 498 607 -5512 314 363 59 0 chr2 43442200 43442335 -209814248 + MIR SINE MIR 49 191 -71 1764 157 28 0 chr2 43442345 43442664 -209813919 + L1MA5 LINE L1 5973 6300 0 787 319 89 52 chr2 43442808 43443506 -209813077 - L1M4 LINE L1 -3313 2833 2110 1798 155 0 35 chr2 43443675 43443985 -209812598 - AluJb SINE Alu -11 301 3 426 324 78 35 chr2 43444060 43444665 -209811918 - L1ME3A LINE L1 -241 5929 5299 399 276 62 26 chr2 43444982 43445322 -209811261 - L1M3 LINE L1 -1524 6041 5690 6247 174 27 4 chr2 43445330 43447168 -209809415 - L1MC1 LINE L1 -20 6296 4413 420 268 71 6 chr2 43447183 43447366 -209809217 - L1MC1 LINE L1 -2154 3975 3781 1437 146 8 20 chr2 43447726 43447972 -209808611 - AluSg/x SINE Alu -3 307 65 1984 140 0 59 chr2 43448049 43448405 -209808178 + MER1B DNA MER1_type 1 335 -2 227 324 50 11 chr2 43448613 43448792 -209807791 - L1M3 LINE L1 -4564 3001 2816 22 35 0 0 chr2 43448904 43448933 -209807650 + AT_rich Low_complexity Low_complexity 1 29 0 1768 168 0 14 chr2 43448998 43449295 -209807288 + AluSx SINE Alu 3 295 -17 424 272 43 47 chr2 43449310 43449545 -209807038 - L1MC1 LINE L1 -4990 1129 896 234 0 0 0 chr2 43450202 43450228 -209806355 + (TG)n Simple_repeat Simple_repeat 2 27 0 597 294 44 66 chr2 43451980 43452218 -209804365 - MARNA DNA Mariner -52 534 292 2116 84 0 0 chr2 43452218 43452491 -209804092 + AluY SINE Alu 35 307 -4 597 294 44 66 chr2 43452491 43452749 -209803834 - MARNA DNA Mariner -294 292 49 1252 171 44 0 chr2 43453189 43453440 -209803143 - L1MA9 LINE L1 0 6312 6051 220 222 28 0 chr2 43453790 43453862 -209802721 + (TA)n Simple_repeat Simple_repeat 2 75 0 240 86 0 0 chr2 43453903 43453938 -209802645 + (TG)n Simple_repeat Simple_repeat 2 36 0 613 201 178 67 chr2 43455310 43455697 -209800886 + MLT1E2 LTR MaLR 90 563 -61 189 252 92 84 chr2 43455717 43455836 -209800747 - MIR SINE MIR -139 123 4 596 275 29 74 chr2 43456194 43456438 -209800145 + MIR SINE MIR 8 240 -22 398 107 48 19 chr2 43456519 43456622 -209799961 + (TA)n Simple_repeat Simple_repeat 2 107 0 401 261 58 36 chr2 43456711 43456849 -209799734 - MER5A DNA MER1_type 0 189 49 310 340 39 26 chr2 43456713 43456866 -209799717 + MER5A DNA MER1_type 17 171 -18 * 256 200 0 0 chr2 43457413 43457463 -209799120 + MER69 DNA AcHobo 86 135 -2391 234 326 23 23 chr2 43458675 43458761 -209797822 - L2 LINE L2 -53 3219 3134 245 314 70 22 chr2 43458828 43458986 -209797597 + MIR SINE MIR 20 182 -66 326 290 121 45 chr2 43459610 43460166 -209796417 + L2 LINE L2 2626 3224 -89 2085 115 4 0 chr2 43460381 43460659 -209795924 - AluSg SINE Alu -31 279 1 275 406 57 11 chr2 43460832 43461115 -209795468 - L2 LINE L2 -620 2694 2399 320 273 61 30 chr2 43462063 43462162 -209794421 - MIR SINE MIR -70 138 37 388 350 32 38 chr2 43463765 43464079 -209792504 + L2 LINE L2 2162 2473 -841 3854 185 48 5 chr2 43464284 43465240 -209791343 + L1MD2 LINE L1 5133 6129 -230 909 126 0 30 chr2 43465242 43465377 -209791206 + FLAM_C SINE Alu 3 133 -10 563 294 13 35 chr2 43465387 43465615 -209790968 + L1MD2 LINE L1 6119 6341 -18 2365 153 45 41 chr2 43466105 43466570 -209790013 - MLT1C LTR MaLR 0 467 1 2667 148 18 11 chr2 43467083 43467537 -209789046 - LTR32 LTR ERVL 0 471 15 2047 75 14 3 chr2 43468363 43468656 -209787927 + L1PA14 LINE L1 5865 6160 -1 231 349 36 12 chr2 43469742 43469825 -209786758 - L2 LINE L2 -5 3267 3183 207 0 0 0 chr2 43470815 43470838 -209785745 + (CAT)n Simple_repeat Simple_repeat 1 23 0 650 268 105 5 chr2 43470838 43471047 -209785536 - MIR SINE MIR -8 254 25 1678 182 67 21 chr2 43471467 43471840 -209784743 - MLT1B LTR MaLR 0 390 1 5774 110 80 0 chr2 43472408 43473386 -209783197 - L1PA14 LINE L1 -2 6159 5162 285 330 15 64 chr2 43474205 43474373 -209782210 - MER91 DNA MER1_type 0 190 41 285 51 0 0 chr2 43474436 43474475 -209782108 + (CA)n Simple_repeat Simple_repeat 1 39 0 581 263 122 5 chr2 43474715 43474928 -209781655 + Charlie1 DNA MER1_type 1 238 -2523 * 663 191 7 0 chr2 43474911 43475052 -209781531 + Charlie1 DNA MER1_type 2620 2761 0 338 281 49 0 chr2 43475180 43475262 -209781321 + MIR SINE MIR 29 114 -148 185 294 150 31 chr2 43475953 43476113 -209780470 - L3 LINE CR1 -27 1550 1372 285 93 0 0 chr2 43476535 43476589 -209779994 - Charlie5 DNA MER1_type -87 2525 2472 21 89 0 0 chr2 43476863 43476919 -209779664 + AT_rich Low_complexity Low_complexity 1 56 0 2071 109 3 3 chr2 43477923 43478237 -209778346 + AluSq SINE Alu 1 314 0 990 197 133 0 chr2 43478465 43478744 -209777839 + MER33 DNA MER1_type 4 319 -5 23 0 0 0 chr2 43478974 43478997 -209777586 + AT_rich Low_complexity Low_complexity 1 23 0 2671 36 0 0 chr2 43479165 43479470 -209777113 + AluYa5 SINE Alu 1 305 -6 194 281 35 0 chr2 43479877 43479934 -209776649 - L2 LINE L2 0 3313 3255 518 277 92 62 chr2 43480028 43480558 -209776025 - L2 LINE L2 -64 3249 2701 1633 149 16 0 chr2 43480672 43480914 -209775669 + AluJo SINE Alu 1 246 -66 399 309 91 19 chr2 43481107 43481317 -209775266 - MIR SINE MIR -14 248 24 26 30 0 0 chr2 43481984 43482017 -209774566 + AT_rich Low_complexity Low_complexity 1 33 0 339 223 78 10 chr2 43482621 43482724 -209773859 - MLT1J2 LTR MaLR -340 110 1 1834 175 3 0 chr2 43482972 43483269 -209773314 + AluJb SINE Alu 1 298 -14 26 62 0 15 chr2 43485153 43485179 -209771404 + AT_rich Low_complexity Low_complexity 1 26 -38 2092 136 0 0 chr2 43485179 43485474 -209771109 + AluSx SINE Alu 5 299 -13 26 62 0 15 chr2 43485474 43485512 -209771071 + AT_rich Low_complexity Low_complexity 26 64 0 270 250 47 0 chr2 43485719 43485783 -209770800 + MLT1L LTR MaLR 2 68 -547 24 0 0 0 chr2 43485872 43485896 -209770687 + AT_rich Low_complexity Low_complexity 1 24 0 210 266 0 31 chr2 43485915 43485979 -209770604 + GA-rich Low_complexity Low_complexity 4 65 0 276 324 56 28 chr2 43486101 43486243 -209770340 - MIR SINE MIR -51 211 66 1340 246 120 5 chr2 43486479 43486870 -209769713 - MLT1H LTR MaLR -113 436 1 756 203 17 23 chr2 43487558 43487735 -209768848 + MER5B DNA MER1_type 1 176 -2 399 271 124 49 chr2 43487873 43488098 -209768485 + MIR SINE MIR 8 249 -13 333 208 179 98 chr2 43488811 43488883 -209767700 + L2 LINE L2 3127 3192 -121 1000 210 36 18 chr2 43488883 43489102 -209767481 + MER58A DNA MER1_type 2 224 0 333 208 179 98 chr2 43489102 43489202 -209767381 + L2 LINE L2 3192 3313 0 309 271 10 0 chr2 43489303 43489399 -209767184 - MIR3 SINE MIR -23 185 89 247 303 61 30 chr2 43490109 43490241 -209766342 - L2 LINE L2 -1 3271 3136 261 0 0 0 chr2 43490617 43490646 -209765937 + (A)n Simple_repeat Simple_repeat 1 29 0 433 301 164 11 chr2 43490682 43490865 -209765718 - L3 LINE CR1 -28 1549 1339 230 299 84 56 chr2 43491572 43491679 -209764904 + L3 LINE CR1 35 144 -1433 545 186 228 0 chr2 43491912 43492057 -209764526 - MIR SINE MIR -34 228 51 369 208 52 0 chr2 43492748 43492825 -209763758 + MER112 DNA MER1_type 6 86 -174 225 0 0 0 chr2 43493231 43493256 -209763327 + (CA)n Simple_repeat Simple_repeat 2 26 0 209 271 0 0 chr2 43494187 43494235 -209762348 + GA-rich Low_complexity Low_complexity 2 49 0 867 193 0 0 chr2 43494470 43494615 -209761968 + MER3 DNA MER1_type 2 146 -63 216 91 45 23 chr2 43494876 43494920 -209761663 + T-rich Low_complexity Low_complexity 3 47 0 195 248 120 77 chr2 43495143 43495260 -209761323 + MIR SINE MIR 20 141 -67 271 302 216 0 chr2 43496142 43496258 -209760325 - MIR3 SINE MIR -9 199 59 291 344 11 0 chr2 43496271 43496361 -209760222 + MER81 DNA DNA 1 91 -23 468 182 57 0 chr2 43496371 43496459 -209760124 + MER81 DNA DNA 22 114 0 291 338 50 12 chr2 43497221 43497381 -209759202 - MIR SINE MIR -36 226 61 261 0 0 0 chr2 43501207 43501236 -209755347 + (A)n Simple_repeat Simple_repeat 1 29 0 403 271 47 18 chr2 43501842 43502012 -209754571 - MER104 DNA MER2_type -1 179 5 372 353 37 0 chr2 43502076 43502212 -209754371 + MLT1I LTR MaLR 81 221 -188 1632 115 138 15 chr2 43502332 43502592 -209753991 - AluSx SINE Alu -20 292 1 686 189 23 0 chr2 43502644 43502776 -209753807 + AluJo SINE Alu 2 136 -176 328 206 0 41 chr2 43502780 43502853 -209753730 + MLT1I LTR MaLR 336 405 -4 4635 22 0 0 chr2 43502954 43503487 -209753096 - L1P LINE L1 -1634 4512 3980 7253 43 6 1 chr2 43503487 43504780 -209751803 + L1PA4 LINE L1 4863 6136 -19 221 323 21 54 chr2 43504780 43504873 -209751710 - MIR SINE MIR -81 127 38 1837 134 0 4 chr2 43505077 43505338 -209751245 + AluSq SINE Alu 1 260 -53 5415 161 21 24 chr2 43507484 43507726 -209748857 + L1PB3 LINE L1 4808 5049 -1105 1785 159 85 23 chr2 43507726 43508079 -209748504 + THE1C LTR MaLR 1 375 0 5415 161 21 24 chr2 43508079 43508438 -209748145 + L1PB3 LINE L1 5049 5407 -747 2138 109 46 60 chr2 43508438 43508805 -209747778 + THE1B LTR MaLR 1 362 -2 5415 161 21 24 chr2 43508805 43509556 -209747027 + L1PB3 LINE L1 5407 6147 -7 29 0 0 0 chr2 43509556 43509585 -209746998 + AT_rich Low_complexity Low_complexity 1 29 0 665 50 0 20 chr2 43509724 43509823 -209746760 + (TCTCCC)n Simple_repeat Simple_repeat 1 97 0 7008 63 18 55 chr2 43509823 43512403 -209744180 + SVA Other Other 57 1386 0 432 301 157 0 chr2 43512600 43512753 -209743830 - MLT1J2 LTR MaLR -267 183 7 270 159 143 16 chr2 43512940 43513003 -209743580 + MER103 DNA DNA 13 83 -83 1262 128 25 0 chr2 43513200 43513396 -209743187 + L1PB4 LINE L1 5766 5966 -190 273 331 0 0 chr2 43513962 43514083 -209742500 + (CATATA)n Simple_repeat Simple_repeat 6 126 0 350 214 48 0 chr2 43514084 43514168 -209742415 + L1MC4 LINE L1 6613 6700 -1342 498 245 0 42 chr2 43514169 43514458 -209742125 + (CATATA)n Simple_repeat Simple_repeat 1 276 0 392 292 49 7 chr2 43514649 43514793 -209741790 - L2 LINE L2 0 3313 3164 1306 257 85 19 chr2 43515401 43516038 -209740545 - L1ME3A LINE L1 -344 5826 5151 1309 215 116 53 chr2 43516141 43516777 -209739806 - L1MC5 LINE L1 -26 7935 7260 1050 206 60 108 chr2 43516937 43517402 -209739181 - L1MC5 LINE L1 -746 7215 6773 643 181 57 105 chr2 43517405 43517615 -209738968 + LTR16A1 LTR ERVL 4 203 -254 270 0 0 0 chr2 43517737 43517767 -209738816 + (CA)n Simple_repeat Simple_repeat 2 31 0 532 289 13 0 chr2 43517772 43517931 -209738652 + LTR16A1 LTR ERVL 297 457 0 2435 77 0 3 chr2 43518141 43518438 -209738145 - AluY SINE Alu -15 296 1 2113 113 0 21 chr2 43518438 43518729 -209737854 - AluSx SINE Alu -5 307 23 280 244 222 0 chr2 43519504 43519594 -209736989 + L2 LINE L2 3200 3309 -4 1590 245 43 19 chr2 43519938 43520354 -209736229 + L1MCb LINE L1 3 428 -5617 * 6515 151 52 103 chr2 43520352 43520604 -209735979 + L1MC3 LINE L1 6102 6365 -1420 3000 119 117 0 chr2 43520604 43521073 -209735510 - MER1A DNA MER1_type 0 527 4 6515 151 52 103 chr2 43521073 43521325 -209735258 + L1MC3 LINE L1 6365 6628 -1157 441 73 0 0 chr2 43521325 43521380 -209735203 - Charlie3 DNA MER1_type -4 2706 2652 6515 151 52 103 chr2 43521380 43522467 -209734116 + L1MC3 LINE L1 6628 7663 -122 1098 100 13 0 chr2 43522467 43522617 -209733966 - THE1B LTR MaLR 0 364 213 462 113 188 0 chr2 43522604 43522684 -209733899 - THE1B LTR MaLR -268 96 2 * 515 171 103 17 chr2 43522685 43522802 -209733781 + L1MC3 LINE L1 7659 7785 0 349 343 61 24 chr2 43523368 43523581 -209733002 - MLT1K LTR MaLR -358 230 10 302 296 35 9 chr2 43523974 43524089 -209732494 + MIR3 SINE MIR 43 160 -48 283 266 62 53 chr2 43524245 43524358 -209732225 + L2 LINE L2 3158 3271 -1 2382 127 85 10 chr2 43525063 43525465 -209731118 + MSTB1 LTR MaLR 1 432 0 491 274 14 55 chr2 43525965 43526133 -209730450 - MIR SINE MIR -54 208 50 311 272 88 18 chr2 43527531 43527645 -209728938 - MIR SINE MIR -78 184 63 * 3656 260 117 21 chr2 43527622 43529033 -209727550 - L2 LINE L2 -475 2839 1293 1986 165 0 19 chr2 43529476 43529792 -209726791 + AluSg SINE Alu 1 310 0 245 200 0 0 chr2 43530375 43530420 -209726163 - MLT1E LTR MaLR 0 567 523 2254 125 3 0 chr2 43530448 43530760 -209725823 + AluSq SINE Alu 1 313 0 1463 181 70 0 chr2 43530771 43531030 -209725553 - AluJo SINE Alu -30 282 6 1331 241 88 60 chr2 43531037 43531114 -209725469 - MLT1E LTR MaLR -37 556 483 1867 146 4 0 chr2 43531114 43531419 -209725164 - AluSg SINE Alu 0 306 1 1331 241 88 60 chr2 43531419 43531875 -209724708 - MLT1E LTR MaLR -110 483 7 356 281 112 15 chr2 43533696 43533892 -209722691 + L2 LINE L2 1795 2009 -1305 1686 61 61 0 chr2 43535356 43535584 -209720999 + L1PA5 LINE L1 5911 6152 -2 476 256 60 36 chr2 43536807 43536904 -209719679 + MIR SINE MIR 72 176 -86 1152 219 0 0 chr2 43536904 43537123 -209719460 - MER20 DNA MER1_type 0 219 1 476 256 60 36 chr2 43537123 43537193 -209719390 + MIR SINE MIR 176 243 -19 1143 300 47 66 chr2 43537694 43538420 -209718163 - L3 LINE CR1 -159 1418 707 756 212 42 60 chr2 43538491 43538627 -209717956 + MER58A DNA MER1_type 10 142 -2278 2343 116 3 0 chr2 43538627 43538937 -209717646 + AluSp SINE Alu 1 311 -2 756 212 42 60 chr2 43538937 43539017 -209717566 + MER58A DNA MER1_type 142 222 -2 2220 172 16 35 chr2 43539846 43540277 -209716306 + MSTB LTR MaLR 1 423 -3 480 304 52 0 chr2 43540423 43540558 -209716025 + MIR SINE MIR 111 252 -10 428 226 36 36 chr2 43540908 43541076 -209715507 - MLT1J LTR MaLR -16 495 328 723 199 37 7 chr2 43541079 43541215 -209715368 + MER5A DNA MER1_type 16 155 -34 810 229 33 38 chr2 43542523 43542763 -209713820 - MIR SINE MIR -16 246 8 23 33 0 0 chr2 43542909 43542939 -209713644 + AT_rich Low_complexity Low_complexity 1 30 0 1216 184 105 113 chr2 43543235 43543750 -209712833 - MER67D LTR ERV1 -1 513 3 993 277 74 32 chr2 43544474 43544839 -209711744 + LTR26 LTR ERV1 55 440 -163 1874 134 22 0 chr2 43544839 43545107 -209711476 + AluSx SINE Alu 30 303 -9 993 277 74 32 chr2 43545107 43545145 -209711438 + LTR26 LTR ERV1 440 475 -128 482 351 66 54 chr2 43545484 43546659 -209709924 + PABL_B-int LTR ERV1 2654 3843 -3279 210 292 0 56 chr2 43546958 43547047 -209709536 - MIR3 SINE MIR -3 205 122 327 230 0 0 chr2 43547434 43547508 -209709075 + L1MC5 LINE L1 7828 7901 -60 1946 161 3 0 chr2 43547680 43547979 -209708604 + AluJo SINE Alu 6 305 -7 508 273 25 0 chr2 43547998 43548119 -209708464 + MER5B DNA MER1_type 53 176 -2 198 0 0 0 chr2 43548880 43548902 -209707681 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 438 292 89 12 chr2 43548965 43549133 -209707450 - MIR3 SINE MIR -24 184 4 307 235 156 84 chr2 43549980 43550159 -209706424 + L2 LINE L2 3122 3313 0 248 250 18 0 chr2 43550735 43550791 -209705792 + GA-rich Low_complexity Low_complexity 5 61 0 3704 30 0 101 chr2 43551128 43551663 -209704920 + L1PA4 LINE L1 5675 6155 0 186 366 12 0 chr2 43551925 43552007 -209704576 - MIR SINE MIR 0 262 180 579 161 195 0 chr2 43552007 43552125 -209704458 + MLT1J LTR MaLR 1 141 -370 273 297 23 86 chr2 43552724 43552852 -209703731 - MIR SINE MIR -96 166 47 212 240 0 20 chr2 43553254 43553304 -209703279 + MIR SINE MIR 69 117 -91 436 298 86 41 chr2 43554239 43554484 -209702099 - MIR SINE MIR -6 256 1 276 296 17 81 chr2 43554573 43554745 -209701838 + MLT1L LTR MaLR 1 161 -454 206 207 35 17 chr2 43554850 43554908 -209701675 + CT-rich Low_complexity Low_complexity 2 60 0 441 293 24 6 chr2 43555022 43555189 -209701394 + MLT1L LTR MaLR 444 613 -2 2026 156 25 3 chr2 43555299 43555657 -209700926 - MER47A DNA MER2_type 0 366 1 677 205 0 0 chr2 43556581 43556693 -209699890 - MER81 DNA DNA 0 114 3 1104 224 5 0 chr2 43557595 43557809 -209698774 + MER20B DNA MER1_type 1 215 -4 1709 162 0 11 chr2 43558072 43558344 -209698239 - AluJb SINE Alu 0 312 44 332 91 0 0 chr2 43558495 43558539 -209698044 + U6 snRNA snRNA 1 44 -63 21 57 0 0 chr2 43558616 43558651 -209697932 + AT_rich Low_complexity Low_complexity 1 35 0 4367 171 70 66 chr2 43559483 43560697 -209695886 - L1MC2 LINE L1 -14 6748 5551 1671 194 3 10 chr2 43560697 43561007 -209695576 + AluSx SINE Alu 1 308 -4 4367 171 70 66 chr2 43561007 43561369 -209695214 - L1MC2 LINE L1 -1211 5551 5192 955 157 34 60 chr2 43561376 43561611 -209694972 + MER46A DNA MER2_type 8 236 0 8063 229 50 14 chr2 43561611 43562109 -209694474 - L1MC2 LINE L1 -1371 5193 4714 2425 83 0 0 chr2 43562109 43562410 -209694173 - AluY SINE Alu -10 301 1 8063 229 50 14 chr2 43562410 43562701 -209693882 - L1MC2 LINE L1 -1850 4714 4435 1854 163 49 69 chr2 43562701 43563167 -209693416 - MSTB2 LTR MaLR 0 457 1 8063 229 50 14 chr2 43563167 43563385 -209693198 - L1MC2 LINE L1 -2129 4435 4226 7854 130 19 9 chr2 43563385 43564670 -209691913 + HSMAR2 DNA Mariner 4 1301 -1 8063 229 50 14 chr2 43564670 43566547 -209690036 - L1MC2 LINE L1 -2338 4226 2203 2693 194 78 79 chr2 43566570 43567873 -209688710 - L1MC2 LINE L1 -4850 1195 1 6050 92 42 0 chr2 43568832 43570334 -209686249 + L1PA11 LINE L1 4623 6166 -8 1650 272 52 14 chr2 43570988 43571484 -209685099 + MLT2E LTR ERVL 1 515 -113 902 225 45 0 chr2 43571541 43571741 -209684842 - MER63A DNA MER1_type -1 209 1 917 79 36 0 chr2 43572000 43572139 -209684444 + L1MA2 LINE L1 5806 5949 -355 226 316 152 32 chr2 43572169 43572419 -209684164 + HAL1b LINE L1 366 645 -703 387 0 0 0 chr2 43572727 43572770 -209683813 + (TG)n Simple_repeat Simple_repeat 2 44 0 1016 145 0 0 chr2 43572775 43572920 -209683663 - AluSq SINE Alu -35 278 134 1099 288 35 44 chr2 43573029 43573481 -209683102 - LTR16A1 LTR ERVL 0 457 10 237 305 0 0 chr2 43573564 43573646 -209682937 + L1MA10 LINE L1 4765 4846 -1300 308 210 0 0 chr2 43573647 43573709 -209682874 - L1MC4 LINE L1 -1339 6703 6642 5186 175 30 8 chr2 43573714 43575163 -209681420 + L1MA10 LINE L1 4848 6327 -7 275 310 47 15 chr2 43575198 43575680 -209680903 + L1 LINE L1 2266 2762 -3384 1602 256 100 24 chr2 43575708 43575902 -209680681 + MLT1E LTR MaLR 1 179 -414 2311 172 24 7 chr2 43575902 43576321 -209680262 + MSTB LTR MaLR 1 426 0 1602 256 100 24 chr2 43576321 43576677 -209679906 + MLT1E LTR MaLR 179 593 0 1342 241 28 23 chr2 43576677 43577212 -209679371 + MLT1E-int LTR MaLR 15 663 -708 335 349 18 12 chr2 43577324 43577490 -209679093 + MLT1E-int LTR MaLR 692 858 -513 223 232 29 0 chr2 43577882 43577951 -209678632 + (TA)n Simple_repeat Simple_repeat 2 72 0 521 150 16 31 chr2 43577961 43578088 -209678495 + L1MC4 LINE L1 7918 8042 0 291 176 139 19 chr2 43578232 43578340 -209678243 + L1MC5 LINE L1 7807 7927 -34 2163 117 7 3 chr2 43578348 43578639 -209677944 + AluSx SINE Alu 1 292 -20 220 167 0 0 chr2 43578754 43578790 -209677793 - MIR SINE MIR -108 154 119 266 328 26 35 chr2 43579648 43579764 -209676819 + MER5B DNA MER1_type 61 175 -3 648 274 174 56 chr2 43579811 43580224 -209676359 - L2 LINE L2 0 3272 2811 318 226 17 70 chr2 43580737 43580852 -209675731 - MIR3 SINE MIR -24 184 76 1425 223 111 29 chr2 43581162 43581713 -209674870 - MER20B DNA MER1_type -1 782 187 1800 244 29 5 chr2 43581720 43581981 -209674602 + L1MD1 LINE L1 89 365 -6175 1683 113 0 32 chr2 43581981 43582229 -209674354 + AluSq SINE Alu 63 302 -11 1800 244 29 5 chr2 43582229 43582385 -209674198 + L1MD1 LINE L1 365 516 -6024 * 1900 149 45 0 chr2 43582373 43582749 -209673834 + L1MD1 LINE L1 1664 2056 -4484 716 131 37 0 chr2 43582756 43582863 -209673720 + AluSc SINE Alu 166 276 -33 813 127 13 13 chr2 43582866 43583024 -209673559 + GA-rich Low_complexity Low_complexity 3 160 0 1552 170 47 87 chr2 43583026 43583598 -209672985 + L1MD1 LINE L1 2011 2559 -3981 2337 96 0 10 chr2 43584725 43585037 -209671546 - AluSq SINE Alu -4 309 1 3112 247 31 9 chr2 43585609 43586499 -209670084 + L1MD1 LINE L1 2637 3546 -2994 * 6272 200 51 39 chr2 43586489 43588428 -209668155 + L1MD1 LINE L1 3901 5878 -758 2191 132 0 0 chr2 43588428 43588724 -209667859 + AluSx SINE Alu 3 298 -14 6272 200 51 39 chr2 43588724 43589487 -209667096 + L1MD1 LINE L1 5878 6630 -6 294 249 98 104 chr2 43589520 43589713 -209666870 - MER20B DNA MER1_type -591 192 1 248 274 24 36 chr2 43589756 43589840 -209666743 - MIR SINE MIR -119 143 61 22 0 0 0 chr2 43589918 43589940 -209666643 + AT_rich Low_complexity Low_complexity 1 22 0 951 312 183 37 chr2 43590030 43591592 -209664991 + L2 LINE L2 1437 3228 -44 25 31 0 0 chr2 43592056 43592088 -209664495 + AT_rich Low_complexity Low_complexity 1 32 0 355 295 121 32 chr2 43592970 43593160 -209663423 + MIR SINE MIR 47 253 -9 187 27 27 54 chr2 43595108 43595145 -209661438 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 2097 188 10 35 chr2 43595638 43596038 -209660545 - MLT1B LTR MaLR 0 390 1 854 277 98 29 chr2 43596539 43596886 -209659697 + MLT1J2 LTR MaLR 59 429 -21 925 199 39 0 chr2 43597018 43597174 -209659409 + FRAM SINE Alu 1 162 -4 197 283 130 33 chr2 43597362 43597454 -209659129 + MIR SINE MIR 17 117 -91 192 289 0 0 chr2 43597546 43597598 -209658985 + L2 LINE L2 3261 3312 -1 255 274 104 28 chr2 43597913 43598019 -209658564 + L2 LINE L2 3195 3308 -5 1632 284 99 60 chr2 43598901 43599778 -209656805 - L2 LINE L2 -405 2909 1999 545 294 19 12 chr2 43601160 43601320 -209655263 + MER5A DNA MER1_type 1 161 -28 262 276 10 31 chr2 43601732 43601830 -209654753 - MIR SINE MIR -3 259 164 666 210 64 0 chr2 43602066 43602096 -209654487 - L1MA10 LINE L1 -4 6330 6301 1083 243 26 31 chr2 43602096 43602446 -209654137 - L1ME1 LINE L1 -31 6135 5788 187 233 244 12 chr2 43602446 43602532 -209654051 - MIR SINE MIR -117 145 40 292 315 35 28 chr2 43603271 43603414 -209653169 - MIR3 SINE MIR -64 144 1 409 247 215 21 chr2 43603919 43604105 -209652478 - MIR SINE MIR 0 262 41 1873 166 13 0 chr2 43604128 43604429 -209652154 - AluJb SINE Alu -1 311 7 496 239 52 8 chr2 43604481 43604615 -209651968 - MIR SINE MIR -15 247 108 600 233 92 25 chr2 43605614 43605777 -209650806 + MIR SINE MIR 89 262 0 316 296 96 24 chr2 43605970 43606095 -209650488 + MIR SINE MIR 46 179 -83 261 160 20 0 chr2 43606197 43606247 -209650336 - MIR SINE MIR -50 212 162 312 326 157 6 chr2 43606620 43606792 -209649791 - L1MC4a LINE L1 -1860 5948 5751 315 296 43 43 chr2 43607785 43607947 -209648636 + L1ME LINE L1 5305 5466 -2342 362 80 0 0 chr2 43607968 43608018 -209648565 - AluSp/q SINE Alu -6 297 248 344 261 267 15 chr2 43608072 43608267 -209648316 + L1ME LINE L1 5533 5776 -345 269 280 67 8 chr2 43608410 43608521 -209648062 - MIR SINE MIR -43 165 49 2851 84 19 84 chr2 43608852 43609252 -209647331 + MLT2A1 LTR ERVL 1 367 -77 562 13 13 13 chr2 43609252 43609328 -209647255 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 2851 84 19 84 chr2 43609328 43609402 -209647181 + MLT2A1 LTR ERVL 367 444 0 204 67 0 0 chr2 43609795 43609825 -209646758 + (TC)n Simple_repeat Simple_repeat 2 31 0 393 225 158 17 chr2 43609907 43610027 -209646556 + MLT1J LTR MaLR 42 178 -333 401 258 140 27 chr2 43610113 43610299 -209646284 + MLT1J LTR MaLR 301 507 -4 1974 123 49 0 chr2 43610521 43610805 -209645778 - AluSx SINE Alu -14 298 1 277 299 52 14 chr2 43611360 43611541 -209645042 - MIR SINE MIR -2 260 27 1900 141 22 0 chr2 43611545 43611854 -209644729 - AluJo SINE Alu 0 315 1 681 202 59 127 chr2 43611940 43612193 -209644390 + MER106A DNA MER1_type 1 236 0 210 280 53 0 chr2 43612350 43612425 -209644158 - MIR SINE MIR -80 182 104 2186 112 7 0 chr2 43612880 43613174 -209643409 + AluSx SINE Alu 1 296 -16 22 56 0 0 chr2 43613321 43613357 -209643226 + AT_rich Low_complexity Low_complexity 1 36 0 211 304 22 54 chr2 43613763 43613855 -209642728 + MIR3 SINE MIR 99 187 -21 312 185 46 0 chr2 43613860 43613925 -209642658 + MIR3 SINE MIR 131 198 -10 * 369 273 57 0 chr2 43613922 43614010 -209642573 - MIR3 SINE MIR -35 173 81 321 325 13 13 chr2 43615944 43616095 -209640488 + MER5B DNA MER1_type 10 160 -18 670 226 55 167 chr2 43616107 43616361 -209640222 + L1MC4 LINE L1 7414 7695 -347 2350 104 10 0 chr2 43616361 43616670 -209639913 + AluSx SINE Alu 1 312 0 670 226 55 167 chr2 43616670 43617051 -209639532 + L1MC4 LINE L1 7695 7978 -64 1601 161 4 18 chr2 43617069 43617342 -209639241 - AluJo SINE Alu -16 296 28 765 220 62 0 chr2 43617613 43617790 -209638793 - MER5A DNA MER1_type 0 189 2 314 314 19 51 chr2 43618159 43618315 -209638268 - MIR3 SINE MIR -54 154 4 482 301 92 0 chr2 43618344 43618507 -209638076 - MIR SINE MIR -56 206 29 440 292 39 0 chr2 43618671 43618801 -209637782 - MIR SINE MIR -82 180 46 194 339 27 62 chr2 43619482 43619594 -209636989 + MIR SINE MIR 7 114 -148 450 325 96 24 chr2 43619925 43620260 -209636323 - Charlie2 DNA MER1_type -2376 406 48 2649 121 6 6 chr2 43620379 43620743 -209635840 + THE1B LTR MaLR 1 364 0 254 167 0 0 chr2 43621287 43621329 -209635254 + MER5B DNA MER1_type 8 49 -129 723 130 0 0 chr2 43621344 43621444 -209635139 - HY3 scRNA scRNA -1 100 1 670 220 14 21 chr2 43621444 43621585 -209634998 + MER5B DNA MER1_type 37 176 -2 1180 184 104 27 chr2 43621745 43621988 -209634595 - Zaphod DNA AcHobo -48 3983 3705 2582 153 40 16 chr2 43621988 43622412 -209634171 - Tigger2a DNA MER2_type 0 434 1 1180 184 104 27 chr2 43622412 43622505 -209634078 - Zaphod DNA AcHobo -326 3705 3621 798 212 16 0 chr2 43622541 43622725 -209633858 - Zaphod DNA AcHobo -515 3516 3330 1355 140 71 81 chr2 43622725 43623193 -209633390 - THE1C LTR MaLR 0 428 1 * 8123 227 113 47 chr2 43623193 43624231 -209632352 - Zaphod DNA AcHobo -697 3334 2366 1881 131 11 7 chr2 43624231 43624513 -209632070 + AluSx SINE Alu 1 283 -29 8123 227 113 47 chr2 43624513 43625218 -209631365 - Zaphod DNA AcHobo -1665 2366 1709 2130 108 56 0 chr2 43625218 43625505 -209631078 + AluSx SINE Alu 1 303 -9 8123 227 113 47 chr2 43625505 43625998 -209630585 - Zaphod DNA AcHobo -2322 1709 1250 2297 107 78 23 chr2 43625998 43626343 -209630240 - THE1B LTR MaLR 0 364 1 8123 227 113 47 chr2 43626343 43626522 -209630061 - Zaphod DNA AcHobo -2781 1250 1084 1871 126 4 22 chr2 43626522 43626799 -209629784 - AluSx SINE Alu -21 291 20 8123 227 113 47 chr2 43626799 43627384 -209629199 - Zaphod DNA AcHobo -2947 1084 133 505 270 110 6 chr2 43627830 43627993 -209628590 + MIR SINE MIR 2 181 -81 1943 125 0 17 chr2 43628031 43628318 -209628265 + AluSc SINE Alu 2 283 -26 937 159 25 13 chr2 43628418 43628575 -209628008 - AluJo SINE Alu -153 159 1 2815 90 3 0 chr2 43630379 43630733 -209625850 - THE1A LTR MaLR 0 355 1 2104 131 0 3 chr2 43633166 43633471 -209623112 + AluSx SINE Alu 1 304 -8 357 203 0 0 chr2 43635246 43635315 -209621268 + U4 snRNA snRNA 1 69 -76 1459 182 31 21 chr2 43635881 43636172 -209620411 - AluJo SINE Alu -18 294 1 1595 152 25 39 chr2 43636297 43636580 -209620003 + AluSx SINE Alu 1 279 -33 351 283 0 30 chr2 43638042 43638141 -209618442 - L2 LINE L2 0 3272 3177 356 284 107 30 chr2 43638194 43638363 -209618220 - MIR SINE MIR -32 230 49 310 336 40 20 chr2 43638472 43638621 -209617962 + MIR SINE MIR 106 257 -5 180 235 0 0 chr2 43638598 43638632 -209617951 + L2 LINE L2 3239 3272 0 * 195 292 117 44 chr2 43638627 43638764 -209617819 - L3 LINE CR1 -24 1553 1407 2172 115 0 0 chr2 43638922 43639226 -209617357 + AluSx SINE Alu 1 304 -8 1664 165 23 26 chr2 43639657 43639966 -209616617 - AluJo SINE Alu -4 308 1 306 286 125 9 chr2 43639989 43640101 -209616482 + MIR SINE MIR 59 183 -79 1573 199 43 3 chr2 43640103 43640430 -209616153 + MER58B DNA MER1_type 2 341 0 434 268 16 24 chr2 43640797 43640924 -209615659 - MIR3 SINE MIR -4 204 79 219 364 62 0 chr2 43641924 43642053 -209614530 - MIR SINE MIR 0 262 126 466 293 66 6 chr2 43643547 43643728 -209612855 - L3b LINE CR1 -288 1295 1104 210 333 96 45 chr2 43643999 43644197 -209612386 + L2 LINE L2 2554 2761 -553 341 129 0 71 chr2 43644386 43644456 -209612127 - LTR67 LTR ERVL -2 555 491 430 196 22 0 chr2 43644709 43644801 -209611782 + MER53 DNA DNA 2 95 -94 336 207 23 11 chr2 43644724 43644811 -209611772 - MER53 DNA DNA -7 182 95 * 207 184 26 0 chr2 43645268 43645306 -209611277 - MIR SINE MIR -117 145 107 1067 188 29 24 chr2 43645373 43645580 -209611003 - MER58A DNA MER1_type -16 208 1 203 240 120 13 chr2 43646470 43646545 -209610038 - MIR3 SINE MIR -15 193 111 1874 107 3 82 chr2 43646672 43647000 -209609583 - AluSx SINE Alu -8 304 3 796 249 35 42 chr2 43647197 43647438 -209609145 + MIR SINE MIR 19 261 -1 938 241 19 5 chr2 43648691 43648907 -209607676 + MER20 DNA MER1_type 1 219 0 819 181 13 7 chr2 43649236 43649391 -209607192 + AluSx SINE Alu 1 156 -156 232 100 0 0 chr2 43649391 43649431 -209607152 + Alu SINE Alu 262 301 0 907 254 41 29 chr2 43649493 43649737 -209606846 + MIR SINE MIR 16 262 0 2138 113 7 0 chr2 43649797 43650098 -209606485 + AluSx SINE Alu 1 303 -9 229 312 39 0 chr2 43650222 43650299 -209606284 - MIR3 SINE MIR -53 155 76 183 184 0 0 chr2 43650314 43650352 -209606231 + CT-rich Low_complexity Low_complexity 2 39 0 386 280 192 33 chr2 43650817 43651124 -209605459 + L3 LINE CR1 909 1264 -313 2001 134 0 10 chr2 43651285 43651591 -209604992 + AluSx SINE Alu 1 303 -9 396 245 126 123 chr2 43651756 43651778 -209604805 + L1MEd LINE L1 920 940 -5590 1980 158 49 86 chr2 43651778 43652208 -209604375 - MLT2D LTR ERVL 0 414 1 396 245 126 123 chr2 43652208 43652446 -209604137 + L1MEd LINE L1 940 1181 -5349 430 288 61 62 chr2 43652461 43652967 -209603616 + L1MEd LINE L1 1254 1857 -1044 2136 97 3 16 chr2 43652967 43653275 -209603308 + AluY SINE Alu 1 304 -7 430 288 61 62 chr2 43653275 43653457 -209603126 + L1MEd LINE L1 1857 2038 -863 1649 151 0 57 chr2 43653642 43653959 -209602624 + AluJo SINE Alu 12 310 -2 670 271 104 61 chr2 43654115 43654555 -209602028 + MLT1J LTR MaLR 45 503 -8 2751 237 45 43 chr2 43654564 43655369 -209601214 + MER21B LTR ERV1 1 806 -57 347 282 119 62 chr2 43655487 43655769 -209600814 + L1MEd LINE L1 2419 2756 -3890 414 198 28 38 chr2 43655774 43655880 -209600703 + MER21B LTR ERV1 491 595 -268 415 301 32 8 chr2 43655894 43656017 -209600566 + L1MEd LINE L1 2774 2899 -3641 482 295 39 39 chr2 43656026 43656260 -209600323 + L3 LINE CR1 1261 1494 -83 425 315 9 0 chr2 43656285 43656393 -209600190 + L2 LINE L2 3160 3268 -4 224 311 0 0 chr2 43656403 43656464 -209600119 + L3 LINE CR1 1514 1574 -3 416 308 86 43 chr2 43657976 43658068 -209598515 - MIR SINE MIR 0 262 175 2053 144 32 62 chr2 43658068 43658470 -209598113 + MLT1B LTR MaLR 1 390 0 416 308 86 43 chr2 43658470 43658611 -209597972 - MIR SINE MIR -87 175 19 922 257 68 15 chr2 43658658 43659103 -209597480 - MLT1G1 LTR MaLR 0 595 73 592 289 72 0 chr2 43659501 43659681 -209596902 - MIR SINE MIR -13 249 57 238 335 59 20 chr2 43660913 43661065 -209595518 - HAL1 LINE L1 -908 1599 1442 23 0 0 0 chr2 43661070 43661093 -209595490 + AT_rich Low_complexity Low_complexity 1 23 0 908 124 0 0 chr2 43661101 43661238 -209595345 - AluSp/q SINE Alu -5 308 172 270 321 12 25 chr2 43661254 43661335 -209595248 - AluSc SINE Alu -82 217 138 208 108 46 15 chr2 43661339 43661404 -209595179 + (CGGGG)n Simple_repeat Simple_repeat 3 69 0 182 260 151 0 chr2 43663134 43663207 -209593376 - MIR SINE MIR -54 208 125 321 331 99 17 chr2 43663402 43663574 -209593009 - MIR SINE MIR -49 213 28 633 249 149 21 chr2 43663591 43663832 -209592751 - MLT1J LTR MaLR -3 508 237 793 189 0 0 chr2 43664171 43664303 -209592280 - FLAM_A SINE Alu -1 132 1 460 265 25 67 chr2 43666057 43666266 -209590317 + MIR SINE MIR 2 258 -4 393 181 8 120 chr2 43667360 43667493 -209589090 - MLT1H LTR MaLR 0 549 432 553 225 28 121 chr2 43667519 43667808 -209588775 - MLT1H LTR MaLR -259 290 29 403 295 51 0 chr2 43668445 43668601 -209587982 + Charlie8 DNA MER1_type 1 164 -2253 372 259 160 0 chr2 43668609 43668740 -209587843 + L1ME3A LINE L1 6002 6153 -17 5296 234 93 35 chr2 43669053 43670649 -209585934 + Charlie8 DNA MER1_type 422 2109 -308 180 111 0 0 chr2 43671017 43671044 -209585539 + (TG)n Simple_repeat Simple_repeat 2 28 0 396 0 0 0 chr2 43671578 43671622 -209584961 + (TC)n Simple_repeat Simple_repeat 1 44 0 575 233 143 5 chr2 43672098 43672287 -209584296 - MIR SINE MIR 0 262 48 219 266 21 32 chr2 43673168 43673262 -209583321 + GA-rich Low_complexity Low_complexity 3 95 0 230 61 0 0 chr2 43673650 43673683 -209582900 + LTR33A LTR ERVL 487 519 -4 2197 66 42 0 chr2 43673731 43674019 -209582564 + AluY SINE Alu 1 300 -11 193 186 23 0 chr2 43674180 43674223 -209582360 + MER5A DNA MER1_type 9 52 -137 204 421 13 0 chr2 43674375 43674527 -209582056 + L2 LINE L2 2898 3051 -221 673 237 30 0 chr2 43674675 43674810 -209581773 + MIR SINE MIR 47 185 -77 229 229 219 10 chr2 43674809 43674905 -209581678 - L2 LINE L2 -9 3304 3189 * 292 315 0 0 chr2 43675037 43675110 -209581473 + L2 LINE L2 3239 3311 -2 5275 44 0 5 chr2 43675525 43676160 -209580423 + L1PA7 LINE L1 5522 6153 -1 222 91 0 0 chr2 43676324 43676357 -209580226 + (T)n Simple_repeat Simple_repeat 1 33 0 438 220 46 9 chr2 43676515 43676624 -209579959 + MIR SINE MIR 66 178 -84 * 673 226 30 24 chr2 43676623 43676791 -209579792 + MIR SINE MIR 75 243 -19 1727 116 24 0 chr2 43677017 43677330 -209579253 + AluSx SINE Alu 26 344 0 234 283 100 82 chr2 43677440 43677905 -209578678 - L2 LINE L2 -129 3184 2699 334 239 37 18 chr2 43678062 43678171 -209578412 + L1MD3 LINE L1 7877 7987 -8 234 0 0 0 chr2 43678801 43678827 -209577756 + (A)n Simple_repeat Simple_repeat 1 26 0 327 104 0 0 chr2 43678829 43678877 -209577706 + (TA)n Simple_repeat Simple_repeat 1 48 0 901 234 7 78 chr2 43679135 43679157 -209577426 + MIR SINE MIR 13 35 -227 1827 144 0 26 chr2 43679157 43679462 -209577121 + AluSx SINE Alu 1 297 -15 901 234 7 78 chr2 43679462 43679708 -209576875 + MIR SINE MIR 35 262 0 741 304 57 26 chr2 43680443 43680792 -209575791 + L2 LINE L2 2280 2639 -675 392 339 86 11 chr2 43680867 43681041 -209575542 - MER5A DNA MER1_type -2 187 1 900 227 34 96 chr2 43681123 43681363 -209575220 - L2 LINE L2 -8 3305 3096 2562 100 3 22 chr2 43681363 43681732 -209574851 + THE1B LTR MaLR 1 362 -2 900 227 34 96 chr2 43681732 43681878 -209574705 - L2 LINE L2 -217 3096 2943 279 185 33 0 chr2 43682277 43682369 -209574214 + GA-rich Low_complexity Low_complexity 4 98 0 2147 109 0 10 chr2 43682479 43682783 -209573800 + AluSg SINE Alu 1 301 -9 477 329 18 0 chr2 43684542 43684709 -209571874 - MIR SINE MIR -3 259 90 372 261 21 56 chr2 43687224 43687366 -209569217 - L3b LINE CR1 -169 1414 1278 186 43 0 0 chr2 43687656 43687679 -209568904 + (GA)n Simple_repeat Simple_repeat 2 24 0 349 217 0 0 chr2 43687681 43687741 -209568842 - AluJo SINE Alu -20 282 223 1093 193 17 0 chr2 43687741 43687922 -209568661 - AluJo SINE Alu -128 184 1 417 301 52 30 chr2 43687922 43688111 -209568472 - MIR SINE MIR -56 206 14 224 235 12 37 chr2 43688904 43688985 -209567598 + GA-rich Low_complexity Low_complexity 3 81 0 749 268 38 17 chr2 43689605 43689844 -209566739 - MIR SINE MIR 0 262 19 631 162 61 95 chr2 43691142 43691226 -209565357 + AluSg/x SINE Alu 135 213 -97 222 37 0 0 chr2 43691226 43691253 -209565330 + (CGGGGG)n Simple_repeat Simple_repeat 1 27 0 631 162 61 95 chr2 43691253 43691316 -209565267 + AluSg/x SINE Alu 213 277 -33 357 24 0 0 chr2 43691316 43691358 -209565225 + (CA)n Simple_repeat Simple_repeat 1 42 0 560 346 106 49 chr2 43691360 43691681 -209564902 - L2 LINE L2 -132 3140 2839 4202 127 1 28 chr2 43691681 43691752 -209564831 - MER41B LTR ERV1 0 635 564 2671 26 0 3 chr2 43691752 43692055 -209564528 + AluYa5 SINE Alu 1 302 -9 4202 127 1 28 chr2 43692055 43692113 -209564470 - MER41B LTR ERV1 -71 564 506 2166 130 0 3 chr2 43692113 43692413 -209564170 + AluSx SINE Alu 1 299 -13 4202 127 1 28 chr2 43692413 43692934 -209563649 - MER41B LTR ERV1 -129 506 1 560 346 106 49 chr2 43692934 43693291 -209563292 - L2 LINE L2 -433 2839 2422 513 248 67 8 chr2 43693506 43693688 -209562895 - MIR SINE MIR -37 225 30 2385 76 0 23 chr2 43695052 43695356 -209561227 + AluY SINE Alu 1 297 -14 252 310 110 10 chr2 43695455 43695555 -209561028 + L3 LINE CR1 990 1099 -478 * 865 248 64 72 chr2 43695537 43695928 -209560655 - L2 LINE L2 -1 3312 2925 181 383 39 23 chr2 43695900 43696028 -209560555 + L3 LINE CR1 1067 1196 -381 * 1876 160 13 3 chr2 43696187 43696494 -209560089 - AluJo SINE Alu -2 310 1 355 217 94 51 chr2 43696781 43696919 -209559664 - L2 LINE L2 -12 3301 3158 726 239 0 38 chr2 43697085 43697244 -209559339 + FRAM SINE Alu 1 153 -13 1419 188 78 44 chr2 43697363 43697656 -209558927 - AluJo SINE Alu -9 303 1 2450 107 0 0 chr2 43698062 43698372 -209558211 + AluSx SINE Alu 1 310 -2 531 300 45 20 chr2 43699480 43699680 -209556903 + MIR SINE MIR 20 224 -38 229 250 56 14 chr2 43699929 43700001 -209556582 + MIR SINE MIR 114 188 -74 2290 106 23 0 chr2 43701815 43702118 -209554465 + AluSx SINE Alu 1 310 -2 1749 169 10 20 chr2 43702133 43702434 -209554149 + AluJb SINE Alu 12 309 -3 617 178 0 25 chr2 43702443 43702600 -209553983 + GA-rich Low_complexity Low_complexity 3 155 0 994 198 6 0 chr2 43706209 43706371 -209550212 - FRAM SINE Alu -1 165 3 283 336 45 37 chr2 43707402 43707536 -209549047 - L2 LINE L2 0 3313 3179 820 221 0 6 chr2 43707587 43707745 -209548838 - FRAM SINE Alu -19 157 1 2504 199 27 40 chr2 43707782 43708331 -209548252 + MLT1F LTR MaLR 1 542 0 463 246 168 17 chr2 43708331 43708510 -209548073 - MIR SINE MIR -52 210 5 318 338 28 0 chr2 43708607 43708752 -209547831 - L2 LINE L2 -213 3059 2911 189 107 0 0 chr2 43708973 43709001 -209547582 + (T)n Simple_repeat Simple_repeat 1 28 0 2576 81 0 0 chr2 43709003 43709312 -209547271 - AluSc SINE Alu 0 309 1 1060 303 53 58 chr2 43709448 43709562 -209547021 + L3 LINE CR1 346 459 -1118 455 122 27 0 chr2 43709562 43709636 -209546947 + MADE1 DNA Mariner 1 76 -4 1060 303 53 58 chr2 43709636 43710102 -209546481 + L3 LINE CR1 459 923 -654 455 276 21 60 chr2 43712041 43712212 -209544371 - MIR3 SINE MIR -59 149 9 254 231 12 53 chr2 43712724 43712893 -209543690 + (TTATA)n Simple_repeat Simple_repeat 2 163 0 335 192 49 127 chr2 43713828 43713927 -209542656 + MIR SINE MIR 92 197 -65 2268 100 7 0 chr2 43713927 43714218 -209542365 - AluSx SINE Alu -14 298 6 335 192 49 127 chr2 43714218 43714245 -209542338 + MIR SINE MIR 197 225 -37 1965 124 4 4 chr2 43714245 43714519 -209542064 - AluSx SINE Alu -38 274 1 335 192 49 127 chr2 43714519 43714587 -209541996 + MIR SINE MIR 225 262 0 308 220 33 11 chr2 43715381 43715472 -209541111 + (TTCA)n Simple_repeat Simple_repeat 1 93 0 34 0 0 0 chr2 43715808 43715842 -209540741 + AT_rich Low_complexity Low_complexity 1 34 0 1047 227 144 49 chr2 43715984 43716392 -209540191 + L2 LINE L2 2622 3110 -203 306 106 0 0 chr2 43716392 43716439 -209540144 + (CA)n Simple_repeat Simple_repeat 1 47 0 1047 227 144 49 chr2 43716439 43716665 -209539918 + L2 LINE L2 3110 3313 0 204 197 0 66 chr2 43718047 43718108 -209538475 + CT-rich Low_complexity Low_complexity 5 61 0 481 328 91 0 chr2 43718119 43718305 -209538278 + MIR SINE MIR 20 222 -40 215 231 0 0 chr2 43718371 43718410 -209538173 + (CA)n Simple_repeat Simple_repeat 2 40 0 1758 195 44 16 chr2 43719329 43719693 -209536890 + MLT1A2 LTR MaLR 1 374 0 1016 231 41 16 chr2 43719995 43720237 -209536346 - MIR SINE MIR -3 259 12 511 187 57 32 chr2 43721389 43721512 -209535071 - MIR SINE MIR -58 204 79 664 261 90 18 chr2 43721518 43721887 -209534696 + MLT1J2 LTR MaLR 5 425 -25 646 222 254 1 chr2 43722436 43722708 -209533875 + L1MC4a LINE L1 5585 5758 -406 22 0 0 0 chr2 43722907 43722929 -209533654 + AT_rich Low_complexity Low_complexity 1 22 0 544 191 21 28 chr2 43724288 43724429 -209532154 - MER103 DNA DNA -7 159 20 459 0 0 0 chr2 43724513 43724564 -209532019 + (TG)n Simple_repeat Simple_repeat 2 52 0 944 142 62 31 chr2 43724951 43725113 -209531470 + MER5A DNA MER1_type 1 167 -22 805 261 139 13 chr2 43725278 43725588 -209530995 + L2 LINE L2 2963 3311 -2 200 156 22 22 chr2 43728373 43728418 -209528165 + GA-rich Low_complexity Low_complexity 1 45 0 2335 103 0 23 chr2 43731253 43731563 -209525020 - AluSg SINE Alu -6 304 2 620 229 0 0 chr2 43731565 43731687 -209524896 - MIR SINE MIR -69 193 72 258 269 151 84 chr2 43731688 43731807 -209524776 + L2 LINE L2 3137 3263 -9 2227 126 0 0 chr2 43731811 43732113 -209524470 - AluSq SINE Alu -11 302 1 254 277 0 0 chr2 43732286 43732351 -209524232 + MIR SINE MIR 102 166 -96 196 343 30 0 chr2 43732420 43732487 -209524096 + MIR SINE MIR 163 231 -31 1675 233 106 33 chr2 43732647 43733192 -209523391 - MLT1G1 LTR MaLR 0 595 11 340 318 0 40 chr2 43733192 43733318 -209523265 - MIR SINE MIR -72 136 16 499 306 29 87 chr2 43734261 43734362 -209522221 + MIR SINE MIR 29 134 -128 2575 51 0 0 chr2 43734362 43734655 -209521928 + AluY SINE Alu 2 294 -17 499 306 29 87 chr2 43734655 43734795 -209521788 + MIR SINE MIR 134 256 -6 722 25 0 0 chr2 43735220 43735301 -209521282 + AluY SINE Alu 79 159 -152 332 290 90 0 chr2 43736976 43737076 -209519507 + L1MC4 LINE L1 6613 6721 -1321 772 290 97 40 chr2 43737097 43737542 -209519041 - L1MC4a LINE L1 -1904 5904 5435 914 149 0 14 chr2 43737543 43737691 -209518892 + AluSq/x SINE Alu 2 147 -165 1330 173 0 0 chr2 43737691 43737911 -209518672 + AluSg/x SINE Alu 85 304 -8 201 245 19 19 chr2 43738004 43738057 -209518526 - MER5B DNA MER1_type -42 136 84 2318 228 50 87 chr2 43738081 43738469 -209518114 + L1ME3 LINE L1 5057 5458 -704 974 214 48 29 chr2 43738469 43738675 -209517908 + MER63A DNA MER1_type 1 210 0 2318 228 50 87 chr2 43738675 43738887 -209517696 + L1ME3 LINE L1 5458 5676 -486 1845 215 92 29 chr2 43738887 43739307 -209517276 + MLT2B1 LTR ERVL 1 393 -127 348 83 0 0 chr2 43739307 43739355 -209517228 + (TA)n Simple_repeat Simple_repeat 2 49 0 1845 215 92 29 chr2 43739355 43739382 -209517201 + MLT2B1 LTR ERVL 393 417 -103 557 52 13 0 chr2 43739382 43739459 -209517124 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 1845 215 92 29 chr2 43739459 43739498 -209517085 + MLT2B1 LTR ERVL 417 519 -1 2318 228 50 87 chr2 43739498 43740004 -209516579 + L1ME3 LINE L1 5676 6135 -27 1492 147 0 106 chr2 43740037 43740377 -209516206 - AluJo SINE Alu -8 304 1 21 57 0 0 chr2 43740381 43740416 -209516167 + AT_rich Low_complexity Low_complexity 1 35 0 391 365 17 59 chr2 43740604 43740894 -209515689 - L2 LINE L2 0 3272 2995 2256 143 13 19 chr2 43740926 43741303 -209515280 - THE1C LTR MaLR 0 375 1 402 286 50 8 chr2 43741675 43741794 -209514789 + L2 LINE L2 3149 3272 0 2265 78 14 0 chr2 43741955 43742248 -209514335 - AluSc SINE Alu -11 298 2 358 239 70 148 chr2 43742518 43742802 -209513781 + MIR SINE MIR 1 262 0 2693 168 77 46 chr2 43743286 43743633 -209512950 - MER69 DNA AcHobo -4 2522 2187 2156 114 0 0 chr2 43743633 43743932 -209512651 + AluSq SINE Alu 1 299 -14 633 27 0 0 chr2 43743932 43744007 -209512576 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 2693 168 77 46 chr2 43744007 43744347 -209512236 - MER69 DNA AcHobo -338 2188 1813 759 241 147 8 chr2 43744348 43744614 -209511969 - MER69 DNA AcHobo -389 837 535 1316 267 67 23 chr2 43744619 43745054 -209511529 + MLT1C LTR MaLR 6 459 -8 1592 241 61 48 chr2 43745067 43745453 -209511130 - MER69 DNA AcHobo -688 538 159 1916 115 32 0 chr2 43745453 43745731 -209510852 + AluSx SINE Alu 1 287 -25 666 62 0 0 chr2 43745731 43745827 -209510756 + (TA)n Simple_repeat Simple_repeat 2 97 0 1592 241 61 48 chr2 43745827 43745961 -209510622 - MER69 DNA AcHobo -1066 160 10 224 349 153 21 chr2 43746399 43746588 -209509995 + L3 LINE CR1 55 268 -1309 327 49 0 0 chr2 43746588 43746629 -209509954 + (TG)n Simple_repeat Simple_repeat 2 42 0 566 253 27 40 chr2 43746743 43746912 -209509671 - MIR3 SINE MIR -54 154 7 288 365 81 19 chr2 43747229 43747440 -209509143 + L3 LINE CR1 248 471 -1106 303 250 50 60 chr2 43747496 43747517 -209509066 + L3 LINE CR1 618 638 -939 2422 57 0 3 chr2 43747517 43747818 -209508765 - AluY SINE Alu -11 300 1 303 250 50 60 chr2 43747818 43747896 -209508687 + L3 LINE CR1 638 716 -861 224 307 105 55 chr2 43748039 43748416 -209508167 - L2 LINE L2 -154 3118 2728 525 327 110 32 chr2 43748518 43748864 -209507719 + L2 LINE L2 2836 3208 -64 239 95 48 0 chr2 43748894 43748936 -209507647 + GA-rich Low_complexity Low_complexity 4 47 0 1596 262 70 19 chr2 43748943 43749470 -209507113 - MLT1H1 LTR MaLR -1 554 1 1047 253 4 16 chr2 43749690 43749935 -209506648 + MIR SINE MIR 19 260 -2 303 267 56 0 chr2 43750304 43750394 -209506189 - L2 LINE L2 -6 3266 3172 2553 108 16 3 chr2 43751189 43751559 -209505024 - THE1C LTR MaLR 0 375 1 216 269 58 0 chr2 43751620 43751724 -209504859 + (CCCTAA)n Simple_repeat Simple_repeat 2 111 0 314 274 98 0 chr2 43753083 43753185 -209503398 - L2 LINE L2 -5 3267 3156 400 201 16 63 chr2 43753259 43753448 -209503135 + (CA)n Simple_repeat Simple_repeat 1 180 0 365 193 12 36 chr2 43753629 43753712 -209502871 + L2 LINE L2 3192 3272 0 291 237 41 31 chr2 43753930 43754027 -209502556 + LTR16B LTR ERVL 319 416 -48 469 118 11 21 chr2 43754268 43754361 -209502222 + (GGGGA)n Simple_repeat Simple_repeat 2 93 0 456 255 0 22 chr2 43754869 43755053 -209501530 + G-rich Low_complexity Low_complexity 1 180 0 184 300 0 0 chr2 43756905 43756945 -209499638 + MIR SINE MIR 40 79 -129 931 265 26 0 chr2 43756958 43757188 -209499395 + MIR SINE MIR 21 256 -6 182 345 84 8 chr2 43757321 43757440 -209499143 + L2 LINE L2 2724 2851 -463 5959 33 83 13 chr2 43757795 43758985 -209497598 + SVA Other Other 1 1383 -3 192 271 42 0 chr2 43759048 43759096 -209497487 + L2 LINE L2 3261 3310 -3 261 289 36 0 chr2 43760582 43760665 -209495918 + L2 LINE L2 3187 3272 0 27 29 0 0 chr2 43762289 43762323 -209494260 + AT_rich Low_complexity Low_complexity 1 34 0 473 224 247 11 chr2 43763174 43763348 -209493235 - MIR SINE MIR -11 251 37 202 320 13 0 chr2 43763663 43763741 -209492842 + (CA)n Simple_repeat Simple_repeat 1 79 0 1114 234 115 50 chr2 43765353 43765598 -209490985 + MLT1F1 LTR MaLR 123 408 -159 2225 71 0 7 chr2 43765598 43765893 -209490690 + AluSc SINE Alu 1 293 -16 1114 234 115 50 chr2 43765893 43766065 -209490518 + MLT1F1 LTR MaLR 408 567 0 932 221 152 64 chr2 43766220 43766595 -209489988 + L2 LINE L2 2875 3282 -31 1813 143 78 21 chr2 43766601 43766874 -209489709 - MLT1A1 LTR MaLR -2 363 66 3462 115 8 2 chr2 43766874 43767368 -209489215 - LOR1a LTR ERV1 0 497 1 1813 143 78 21 chr2 43767368 43767429 -209489154 - MLT1A1 LTR MaLR -299 66 10 441 0 0 0 chr2 43767541 43767590 -209488993 + (TG)n Simple_repeat Simple_repeat 2 50 0 1833 78 0 4 chr2 43767590 43767832 -209488751 - AluSq SINE Alu -28 285 45 306 298 121 8 chr2 43767897 43768021 -209488562 - MIR SINE MIR -75 187 50 449 316 0 32 chr2 43768078 43768233 -209488350 - MIR SINE MIR -50 212 63 219 224 0 35 chr2 43768237 43768295 -209488288 - L2 LINE L2 -1 3271 3216 347 283 62 118 chr2 43768569 43768876 -209487707 - L1MB5 LINE L1 -136 6030 5743 597 285 55 15 chr2 43768930 43769210 -209487373 - L1MB5 LINE L1 -619 5547 5328 1007 225 73 45 chr2 43769466 43769981 -209486602 + L1MC4 LINE L1 5125 5375 -787 278 174 0 0 chr2 43769981 43770027 -209486556 + Alu SINE Alu 244 289 -12 1007 225 73 45 chr2 43770027 43770160 -209486423 + L1MC4 LINE L1 5375 5503 -659 542 238 65 0 chr2 43770142 43770379 -209486204 + L1ME3A LINE L1 5887 6170 0 * 2181 98 0 19 chr2 43770640 43770956 -209485627 + AluSx SINE Alu 1 310 -2 328 306 60 15 chr2 43770979 43771113 -209485470 - MIR3 SINE MIR -68 140 1 1809 126 68 0 chr2 43772438 43772716 -209483867 - AluSg SINE Alu -13 297 1 518 254 16 8 chr2 43772752 43772878 -209483705 + AluJb SINE Alu 183 309 -3 794 251 81 9 chr2 43772963 43773174 -209483409 - MIR SINE MIR -17 245 20 2217 98 0 0 chr2 43773977 43774282 -209482301 - AluSq SINE Alu -8 305 1 323 264 251 18 chr2 43774761 43774928 -209481655 + MIR SINE MIR 2 207 -55 274 296 49 0 chr2 43775026 43775107 -209481476 - MIR SINE MIR -79 129 45 950 223 65 140 chr2 43775512 43775828 -209480755 - L1ME3A LINE L1 -9 6161 5823 441 111 0 0 chr2 43775828 43775891 -209480692 + L1PA8 LINE L1 6097 6159 -13 950 223 65 140 chr2 43775891 43775916 -209480667 - L1ME3A LINE L1 -347 5823 5798 936 80 5 43 chr2 43775916 43776103 -209480480 + (TA)n Simple_repeat Simple_repeat 1 180 0 950 223 65 140 chr2 43776103 43776226 -209480357 - L1ME3A LINE L1 -372 5798 5729 924 161 0 38 chr2 43776304 43776490 -209480093 + AluJb SINE Alu 123 301 -11 6588 43 2 6 chr2 43776521 43777319 -209479264 - SVA Other Other 0 1386 592 656 64 6 76 chr2 43777339 43777511 -209479072 - SVA Other Other -592 794 635 594 127 9 96 chr2 43777696 43777916 -209478667 - SVA Other Other -520 866 666 5555 78 28 16 chr2 43777932 43778781 -209477802 - SVA Other Other -520 866 8 2024 141 30 43 chr2 43778947 43779160 -209477423 - MLT1A1 LTR MaLR 0 365 158 2092 112 10 13 chr2 43779160 43779472 -209477111 - AluSx SINE Alu -1 311 1 2024 141 30 43 chr2 43779472 43779627 -209476956 - MLT1A1 LTR MaLR -207 158 2 5473 51 0 31 chr2 43779852 43779985 -209476598 + L1PA7 LINE L1 5366 5502 -652 2217 103 0 0 chr2 43779985 43780276 -209476307 + AluSc SINE Alu 2 292 -17 5473 51 0 31 chr2 43780276 43780850 -209475733 + L1PA7 LINE L1 5502 6051 -103 673 225 107 1 chr2 43781001 43781241 -209475342 + L1MC4a LINE L1 5619 5762 -402 2005 135 10 0 chr2 43781246 43781543 -209475040 + AluSx SINE Alu 1 300 -12 321 248 8 16 chr2 43782573 43782694 -209473889 + CT-rich Low_complexity Low_complexity 1 120 0 1263 207 89 26 chr2 43782696 43782966 -209473617 - AluJo SINE Alu -13 289 3 474 271 52 7 chr2 43782971 43783126 -209473457 - L1ME3A LINE L1 -463 5658 5497 2028 110 7 10 chr2 43785793 43786085 -209470498 - AluSx SINE Alu -21 291 1 1938 159 0 14 chr2 43787246 43787541 -209469042 + AluJb SINE Alu 1 291 -21 303 331 84 30 chr2 43787894 43788060 -209468523 + HAL1 LINE L1 473 647 -1860 291 232 131 10 chr2 43788280 43788379 -209468204 + HAL1 LINE L1 777 887 -1620 412 259 59 84 chr2 43788384 43788623 -209467960 + HAL1 LINE L1 2244 2476 -31 314 311 84 99 chr2 43788932 43789266 -209467317 - L2 LINE L2 -16 3297 2974 1699 162 13 54 chr2 43789266 43789581 -209467002 + AluJo SINE Alu 1 302 -10 314 311 84 99 chr2 43789581 43789853 -209466730 - L2 LINE L2 -339 2974 2699 261 303 182 0 chr2 43789986 43790085 -209466498 - L2 LINE L2 0 3313 3197 490 233 110 76 chr2 43790297 43790546 -209466037 + MLT1H LTR MaLR 32 302 -228 273 210 0 16 chr2 43790627 43790689 -209465894 + MLT1H LTR MaLR 489 549 0 24 0 0 0 chr2 43791433 43791457 -209465126 + AT_rich Low_complexity Low_complexity 1 24 0 215 0 67 0 chr2 43791742 43791772 -209464811 + (CACAA)n Simple_repeat Simple_repeat 3 34 0 249 245 0 0 chr2 43792467 43792516 -209464067 + G-rich Low_complexity Low_complexity 1 49 0 417 216 85 68 chr2 43792762 43792938 -209463645 + MLT1J2 LTR MaLR 59 237 -213 280 245 47 28 chr2 43792979 43793085 -209463498 + MLT1J1 LTR MaLR 339 446 0 228 359 41 28 chr2 43793219 43793290 -209463293 - L2 LINE L2 -18 3295 3226 444 203 30 117 chr2 43793290 43793487 -209463096 - MER104 DNA MER2_type 0 180 1 228 359 41 28 chr2 43793487 43793560 -209463023 - L2 LINE L2 -87 3226 3149 1137 199 165 16 chr2 43794727 43794867 -209461716 + MLT1A2 LTR MaLR 5 123 -251 180 0 0 0 chr2 43794867 43794887 -209461696 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 1137 199 165 16 chr2 43794887 43795068 -209461515 + MLT1A2 LTR MaLR 123 374 0 289 122 20 0 chr2 43795135 43795184 -209461399 + L2 LINE L2 3264 3313 0 1885 171 0 7 chr2 43795307 43795599 -209460984 + AluJb SINE Alu 1 290 -22 325 310 113 7 chr2 43796336 43796742 -209459841 - L1M4 LINE L1 -812 5334 4886 1999 118 86 9 chr2 43799091 43799439 -209457144 + THE1C LTR MaLR 1 375 0 1433 243 128 16 chr2 43799638 43800090 -209456493 + MLT1J LTR MaLR 1 503 -8 670 221 146 0 chr2 43800280 43800438 -209456145 + MER5A DNA MER1_type 9 189 0 691 205 0 0 chr2 43800745 43800857 -209455726 + FLAM_A SINE Alu 5 116 -17 317 280 108 25 chr2 43800935 43801092 -209455491 + L1MEd LINE L1 653 822 -5297 804 235 163 89 chr2 43801327 43801791 -209454792 - MLT1F LTR MaLR -1 541 80 2035 125 7 4 chr2 43801791 43802247 -209454336 - AluJb SINE Alu 0 457 1 804 235 163 89 chr2 43802247 43802334 -209454249 - MLT1F LTR MaLR -462 80 1 835 233 11 0 chr2 43802349 43802525 -209454058 + MER45A DNA AcHobo 1 178 0 1184 276 60 21 chr2 43803620 43804087 -209452496 + LTR33A LTR ERVL 1 485 -38 539 309 68 4 chr2 43805915 43806151 -209450432 - MIR SINE MIR 0 262 12 2329 76 28 3 chr2 43806613 43806903 -209449680 - AluY SINE Alu -14 297 1 2332 89 0 0 chr2 43806916 43807256 -209449327 - AluY SINE Alu 0 340 1 2147 108 39 0 chr2 43807258 43807544 -209449039 - AluSx SINE Alu -15 297 1 2126 160 8 0 chr2 43807701 43808064 -209448519 - MER47A DNA MER2_type 0 366 1 350 253 7 84 chr2 43810459 43810613 -209445970 + Charlie8 DNA MER1_type 1 142 -2275 2393 99 3 13 chr2 43810912 43811224 -209445359 + AluSq SINE Alu 1 309 -4 7202 34 1 1 chr2 43811271 43812543 -209444040 + L1PA5 LINE L1 4873 6145 -9 2088 107 50 10 chr2 43812659 43812958 -209443625 - AluSx SINE Alu -1 311 1 314 362 87 0 chr2 43813019 43813168 -209443415 - L1MC/D LINE L1 -2031 5777 5616 2293 96 7 0 chr2 43814810 43815112 -209441471 - AluSq SINE Alu -9 304 1 927 217 8 41 chr2 43815300 43815544 -209441039 - MER106A DNA MER1_type 0 236 1 334 274 9 28 chr2 43815729 43815835 -209440748 + LTR33 LTR ERVL 96 199 -322 211 274 0 0 chr2 43816640 43816691 -209439892 + MIR SINE MIR 157 207 -55 364 312 101 25 chr2 43817190 43817427 -209439156 - MIR SINE MIR -6 256 2 203 311 14 0 chr2 43817941 43818015 -209438568 - L3b LINE CR1 -169 1414 1340 28 61 0 0 chr2 43819668 43819717 -209436866 + AT_rich Low_complexity Low_complexity 1 49 0 450 283 7 22 chr2 43821319 43821388 -209435195 - MER5A DNA MER1_type -6 183 115 987 177 12 0 chr2 43821388 43821552 -209435031 - FRAM SINE Alu 0 166 1 450 283 7 22 chr2 43821552 43821620 -209434963 - MER5A DNA MER1_type -74 115 48 525 298 48 16 chr2 43822337 43822525 -209434058 - MIR SINE MIR -10 252 59 614 272 49 36 chr2 43825170 43825394 -209431189 - MIR SINE MIR -17 245 19 2239 109 30 0 chr2 43825398 43825700 -209430883 - AluSx SINE Alu -1 311 1 227 226 18 65 chr2 43829576 43829744 -209426839 + (CCGGG)n Simple_repeat Simple_repeat 1 160 0 25 51 0 0 chr2 43829804 43829843 -209426740 + GC_rich Low_complexity Low_complexity 1 39 0 50 102 0 0 chr2 43829947 43830123 -209426460 + GC_rich Low_complexity Low_complexity 1 176 0 393 75 0 0 chr2 43831375 43831428 -209425155 + (TG)n Simple_repeat Simple_repeat 2 54 0 429 236 126 16 chr2 43831587 43831714 -209424869 - MLT1E LTR MaLR -448 145 5 207 258 0 16 chr2 43831734 43831796 -209424787 + L2 LINE L2 3210 3270 -2 3238 70 15 4 chr2 43833072 43833530 -209423053 + L1PA8 LINE L1 5710 6172 0 337 286 85 80 chr2 43833548 43833772 -209422811 + MIR SINE MIR 20 244 -18 861 186 12 0 chr2 43837909 43838081 -209418502 + MER5B DNA MER1_type 5 178 0 348 159 11 91 chr2 43838098 43838186 -209418397 + MER5A DNA MER1_type 10 90 -99 931 153 33 7 chr2 43838244 43838394 -209418189 + MER5B DNA MER1_type 5 158 -20 694 218 115 2 chr2 43838397 43838559 -209418024 - MER5B DNA MER1_type -5 173 7 777 159 80 23 chr2 43839044 43839220 -209417363 + MER53 DNA DNA 4 189 0 2145 101 0 3 chr2 43839386 43839682 -209416901 - AluSx SINE Alu -17 295 1 560 111 89 0 chr2 43840292 43840382 -209416201 + MER4A LTR ERV1 1 98 -566 1976 138 8 45 chr2 43840382 43840737 -209415846 + MER4A LTR ERV1 261 664 0 438 20 0 0 chr2 43842683 43842734 -209413849 + (TG)n Simple_repeat Simple_repeat 2 52 0 2657 92 19 3 chr2 43843033 43843402 -209413181 + THE1C LTR MaLR 1 375 0 726 307 54 4 chr2 43843419 43843660 -209412923 + MIR SINE MIR 10 262 0 1677 111 6 105 chr2 43844723 43845048 -209411535 - AluJb SINE Alu -19 293 1 3842 144 45 30 chr2 43845299 43845992 -209410591 - MER39 LTR ERV1 -4 703 1 530 256 121 10 chr2 43846066 43846265 -209410318 - MIR SINE MIR -38 224 4 322 268 63 42 chr2 43846693 43846835 -209409748 + Charlie8 DNA MER1_type 46 190 -2227 8750 241 101 36 chr2 43848053 43850545 -209406038 + L2 LINE L2 16 2345 -968 1677 170 0 23 chr2 43850545 43850851 -209405732 + AluJb SINE Alu 1 299 -13 8750 241 101 36 chr2 43850851 43850962 -209405621 + L2 LINE L2 2345 2447 -866 1290 167 152 11 chr2 43850962 43851226 -209405357 + AluJb SINE Alu 1 301 -1 8750 241 101 36 chr2 43851226 43851727 -209404856 + L2 LINE L2 2447 3312 -1 180 77 0 0 chr2 43851900 43851926 -209404657 + (GA)n Simple_repeat Simple_repeat 1 26 0 2063 98 0 0 chr2 43853068 43853344 -209403239 + AluSg SINE Alu 5 280 -30 303 122 0 0 chr2 43853349 43853398 -209403185 + (TG)n Simple_repeat Simple_repeat 2 50 0 225 244 47 0 chr2 43853398 43853484 -209403099 - L1MC4 LINE L1 -1339 6703 6614 * 228 233 47 0 chr2 43853414 43853500 -209403083 + L1MC4 LINE L1 6614 6703 -1339 431 184 0 10 chr2 43853658 43853756 -209402827 + (CA)n Simple_repeat Simple_repeat 1 97 0 673 231 84 48 chr2 43854389 43854611 -209401972 - L1ME4a LINE L1 -2 6119 5880 2202 107 0 19 chr2 43854611 43854929 -209401654 + AluSx SINE Alu 1 312 0 673 231 84 48 chr2 43854929 43855039 -209401544 - L1ME4a LINE L1 -241 5880 5775 2062 142 0 0 chr2 43855903 43856214 -209400369 + AluSx SINE Alu 1 311 -1 860 209 0 0 chr2 43856222 43856385 -209400198 + AluJb SINE Alu 137 299 -13 197 268 211 14 chr2 43856571 43856713 -209399870 - L2 LINE L2 -272 3000 2831 254 185 37 102 chr2 43856883 43856991 -209399592 + MER103 DNA DNA 65 165 -1 201 294 29 0 chr2 43857484 43857552 -209399031 + T-rich Low_complexity Low_complexity 5 74 0 1604 158 36 26 chr2 43857554 43857857 -209398726 - AluJo SINE Alu -2 310 5 615 220 254 6 chr2 43858292 43858469 -209398114 + MIR SINE MIR 2 222 -40 220 301 257 29 chr2 43860184 43860320 -209396263 + MER5A DNA MER1_type 16 182 -7 296 157 59 0 chr2 43860952 43861003 -209395580 + MER5B DNA MER1_type 1 54 -124 517 193 18 0 chr2 43861004 43861118 -209395465 - L1MA10 LINE L1 -7 6327 6212 1068 62 0 0 chr2 43861145 43861274 -209395309 - AluSq/x SINE Alu -183 130 2 4695 201 73 64 chr2 43861275 43862467 -209394116 - L1M4 LINE L1 -1009 5137 3958 1795 146 0 0 chr2 43862467 43862734 -209393849 + AluSx SINE Alu 1 267 -45 1017 113 0 0 chr2 43862737 43862896 -209393687 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 4695 201 73 64 chr2 43862896 43863170 -209393413 - L1M4 LINE L1 -2189 3957 3653 2179 108 3 10 chr2 43863222 43863536 -209393047 - AluSq SINE Alu 0 313 2 2120 84 28 3 chr2 43863545 43863831 -209392752 - AluSx SINE Alu -19 293 1 2389 87 3 0 chr2 43863896 43864208 -209392375 - AluSp SINE Alu 0 313 1 23 0 0 0 chr2 43864962 43864985 -209391598 + AT_rich Low_complexity Low_complexity 1 23 0 472 277 85 67 chr2 43865366 43865673 -209390910 - L1ME4a LINE L1 -70 6051 5732 2078 104 3 0 chr2 43865673 43865960 -209390623 - AluSc SINE Alu -6 303 16 472 277 85 67 chr2 43865960 43866099 -209390484 - L1ME4a LINE L1 -389 5732 5597 2032 127 0 0 chr2 43866176 43866500 -209390083 + AluSx SINE Alu 1 312 0 484 193 25 134 chr2 43867630 43867868 -209388715 - L1MC5 LINE L1 -48 7913 7702 2173 104 3 3 chr2 43867868 43868175 -209388408 - AluSq SINE Alu -6 307 1 658 265 217 36 chr2 43869302 43869611 -209386972 + L2 LINE L2 2947 3311 -2 2048 156 169 14 chr2 43870685 43871122 -209385461 + MLT1D LTR MaLR 1 505 0 348 238 12 12 chr2 43871143 43871223 -209385360 - L2 LINE L2 -47 3266 3187 219 88 0 0 chr2 43871509 43871543 -209385040 + (TC)n Simple_repeat Simple_repeat 1 34 0 2240 59 38 0 chr2 43871767 43872056 -209384527 - AluSp SINE Alu -11 302 3 625 260 77 16 chr2 43872548 43872794 -209383789 - MIR SINE MIR 0 262 2 310 286 79 29 chr2 43874965 43875105 -209381478 - MIR SINE MIR -39 223 77 24 0 0 0 chr2 43875477 43875501 -209381082 + GC_rich Low_complexity Low_complexity 1 24 0 252 326 53 63 chr2 43876435 43876625 -209379958 + L2 LINE L2 2994 3181 -91 2218 150 81 8 chr2 43876656 43877049 -209379534 - MSTA LTR MaLR 0 428 7 201 304 36 0 chr2 43877053 43877109 -209379474 + L2 LINE L2 3254 3311 -2 265 188 14 29 chr2 43878234 43878303 -209378280 + GA-rich Low_complexity Low_complexity 4 71 0 2050 121 0 7 chr2 43878549 43878855 -209377728 - AluSx SINE Alu -8 304 1 353 331 77 60 chr2 43878861 43879275 -209377308 - L2 LINE L2 -18 3254 2834 1939 134 3 0 chr2 43879949 43880241 -209376342 - AluJb SINE Alu -19 293 1 181 338 70 0 chr2 43880596 43880667 -209375916 - L2 LINE L2 -4 3309 3234 1891 149 13 7 chr2 43881058 43881367 -209375216 - AluJb SINE Alu -1 311 1 2055 105 0 7 chr2 43881392 43881701 -209374882 + AluSx SINE Alu 1 307 0 404 281 20 127 chr2 43881702 43881994 -209374589 + L2 LINE L2 3010 3270 -2 266 158 0 0 chr2 43882554 43882592 -209373991 + MLT1L LTR MaLR 360 397 -218 339 200 76 57 chr2 43882634 43882739 -209373844 + MLT1J LTR MaLR 404 510 -1 533 272 36 93 chr2 43882833 43883040 -209373543 + L2 LINE L2 2544 2732 -582 2073 114 3 7 chr2 43883040 43883338 -209373245 - AluSq SINE Alu -16 297 1 533 272 36 93 chr2 43883338 43883409 -209373174 + L2 LINE L2 2732 2806 -508 676 271 6 18 chr2 43883425 43883595 -209372988 - MER5B DNA MER1_type -2 176 9 640 320 119 36 chr2 43883600 43884038 -209372545 + L2 LINE L2 2809 3282 -31 994 169 12 12 chr2 43884040 43884212 -209372371 - LTR40b LTR ERVL 0 462 291 1286 232 25 4 chr2 43884285 43884583 -209372000 - LTR40a LTR ERVL -203 297 14 567 299 24 64 chr2 43884583 43884958 -209371625 + L1MEc LINE L1 200 559 -5837 1661 177 32 64 chr2 43885015 43885388 -209371195 - MLT1A1 LTR MaLR 0 365 5 1047 146 30 90 chr2 43885453 43885686 -209370897 - MER20 DNA MER1_type 0 219 1 781 250 33 29 chr2 43885767 43886007 -209370576 - L1MCc LINE L1 -6159 264 24 483 279 149 26 chr2 43887423 43887591 -209368992 - L1ME4a LINE L1 -101 6020 5874 2121 111 0 3 chr2 43887591 43887889 -209368694 - AluSx SINE Alu -15 297 1 483 279 149 26 chr2 43887889 43888176 -209368407 - L1ME4a LINE L1 -247 5874 5509 1510 154 14 134 chr2 43888268 43888618 -209367965 - AluYb8 SINE Alu 0 308 1 945 224 128 17 chr2 43888620 43888984 -209367599 + MER57A LTR ERV1 31 403 0 478 248 86 0 chr2 43889356 43889473 -209367110 + L2 LINE L2 3186 3312 -1 323 223 30 176 chr2 43890331 43890564 -209366019 - L2 LINE L2 0 3313 3115 213 361 12 0 chr2 43890943 43891026 -209365557 + L2 LINE L2 3187 3270 -2 1870 143 7 4 chr2 43891468 43891748 -209364835 - AluSx SINE Alu -5 307 27 423 262 95 0 chr2 43891858 43892016 -209364567 - MIR3 SINE MIR -14 194 20 658 323 77 53 chr2 43892706 43893161 -209363422 + MLT1K LTR MaLR 2 467 -121 632 253 54 7 chr2 43894080 43894357 -209362226 + L1M4 LINE L1 5102 5391 -755 584 293 9 47 chr2 43894371 43894586 -209361997 - MIR SINE MIR -51 211 5 1184 153 186 5 chr2 43894595 43894810 -209361773 + AluJo SINE Alu 1 254 -58 1214 223 89 6 chr2 43945550 43945864 -209310719 + MER58B DNA MER1_type 2 341 0 339 333 104 28 chr2 43946010 43946259 -209310324 - L2 LINE L2 -468 2846 2579 1561 173 40 106 chr2 43947184 43947444 -209309139 - L1ME1 LINE L1 -5 6161 5950 1746 172 3 18 chr2 43947444 43947729 -209308854 - AluJo SINE Alu -30 282 2 1561 173 40 106 chr2 43947729 43947987 -209308596 - L1ME1 LINE L1 -216 5950 5677 256 228 0 0 chr2 43947985 43948042 -209308541 - L1MB5 LINE L1 -180 5994 5938 * 1642 217 58 51 chr2 43948076 43948624 -209307959 - L1MB5 LINE L1 -855 5291 4740 24 32 0 0 chr2 43948631 43948662 -209307921 + AT_rich Low_complexity Low_complexity 1 31 0 1334 126 9 14 chr2 43948689 43948903 -209307680 - AluJb SINE Alu -97 215 3 227 118 0 0 chr2 43948937 43948971 -209307612 - Alu SINE Alu -11 290 257 469 162 0 0 chr2 43949073 43949147 -209307436 - AluS SINE Alu -238 74 1 524 133 0 0 chr2 43949169 43949244 -209307339 + AluJo SINE Alu 1 75 -237 843 119 0 24 chr2 43949352 43949478 -209307105 - FLAM_C SINE Alu -10 133 11 1091 218 0 5 chr2 43949692 43949908 -209306675 + AluJo SINE Alu 75 289 -23 324 251 134 53 chr2 43949942 43950113 -209306470 - MIR SINE MIR -75 187 3 21 0 0 0 chr2 43950182 43950203 -209306380 + AT_rich Low_complexity Low_complexity 1 21 0 571 306 90 5 chr2 43950622 43950844 -209305739 - L2 LINE L2 -681 2633 2393 1175 205 31 4 chr2 43951063 43951321 -209305262 - MER58 DNA MER1_type -2155 265 1 251 279 115 33 chr2 43951588 43951710 -209304873 - MLT1K LTR MaLR -146 442 311 25 31 0 0 chr2 43951966 43951998 -209304585 + AT_rich Low_complexity Low_complexity 1 32 0 577 56 0 0 chr2 43952100 43952171 -209304412 + AluS SINE Alu 2 72 -241 633 108 43 0 chr2 43952183 43952276 -209304307 + AluS SINE Alu 1 97 -216 984 30 8 15 chr2 43952376 43952507 -209304076 + L1PA4 LINE L1 6026 6155 0 26 50 0 0 chr2 43952971 43953011 -209303572 + AT_rich Low_complexity Low_complexity 1 40 0 577 212 30 38 chr2 43953422 43953554 -209303029 + L2 LINE L2 3175 3305 -8 931 179 6 6 chr2 43953596 43953758 -209302825 - AluSg/x SINE Alu -42 268 107 1172 188 15 55 chr2 43953769 43954040 -209302543 + MLT1B LTR MaLR 129 388 -2 1386 12 0 0 chr2 43954420 43954580 -209302003 + L1PA2 LINE L1 5995 6154 -1 1580 240 67 26 chr2 43954649 43955143 -209301440 + L1MC4a LINE L1 6441 6960 -848 2097 123 13 7 chr2 43955143 43955452 -209301131 + AluJb SINE Alu 1 311 -1 1580 240 67 26 chr2 43955452 43955494 -209301089 + L1MC4a LINE L1 6960 6999 -809 * 1961 206 80 55 chr2 43955490 43956127 -209300456 + L1MC4 LINE L1 7238 7890 -152 422 234 206 0 chr2 43956292 43956433 -209300150 - Charlie8 DNA MER1_type -2226 191 22 351 223 16 50 chr2 43956636 43956757 -209299826 - L1MC4 LINE L1 0 8042 7926 2182 112 7 0 chr2 43956839 43957135 -209299448 + AluSx SINE Alu 1 298 -14 868 241 102 55 chr2 43957139 43957559 -209299024 - L1MC4 LINE L1 -130 7912 7473 21 0 0 0 chr2 43957950 43957971 -209298612 + AT_rich Low_complexity Low_complexity 1 21 0 566 277 66 51 chr2 43958363 43958619 -209297964 - MIR SINE MIR 0 262 3 2151 133 3 0 chr2 43959587 43959895 -209296688 - AluSx SINE Alu -3 309 1 374 319 112 6 chr2 43960271 43960440 -209296143 + L2 LINE L2 1814 2000 -1314 185 299 261 14 chr2 43960490 43960697 -209295886 + L2 LINE L2 2141 2398 -916 2318 96 0 0 chr2 43960857 43961150 -209295433 + AluY SINE Alu 1 293 -18 2209 84 10 7 chr2 43961901 43962210 -209294373 - AluY SINE Alu -1 310 1 2333 85 7 7 chr2 43962490 43962795 -209293788 - AluY SINE Alu -6 305 1 1969 128 0 35 chr2 43964252 43964392 -209292191 + AluSx SINE Alu 1 144 -168 2235 111 3 0 chr2 43964392 43964689 -209291894 + AluSq SINE Alu 1 298 -15 1969 128 0 35 chr2 43964689 43964860 -209291723 + AluSx SINE Alu 144 301 -11 514 245 134 22 chr2 43965539 43965808 -209290775 - L1ME3A LINE L1 -219 5951 5653 828 168 23 12 chr2 43965858 43966031 -209290552 + MER58A DNA MER1_type 49 223 -1 610 289 20 36 chr2 43966051 43966352 -209290231 - L1ME3A LINE L1 -526 5636 5341 1364 163 18 5 chr2 43966392 43966613 -209289970 - AluJb SINE Alu -88 224 1 1694 140 56 59 chr2 43966898 43967256 -209289327 - Tigger2 DNA MER2_type -2 2716 2360 2263 135 13 5 chr2 43967257 43967641 -209288942 + Tigger4(Zombi) DNA MER2_type 2345 2731 0 771 167 30 0 chr2 43967839 43967971 -209288612 + AluJo SINE Alu 1 136 -176 740 208 84 7 chr2 43967993 43968147 -209288436 - FRAM SINE Alu 0 166 1 1384 168 63 8 chr2 43968167 43968435 -209288148 - AluJo SINE Alu -17 295 13 375 265 44 52 chr2 43969370 43969506 -209287077 + MIR3 SINE MIR 64 198 -10 234 214 20 71 chr2 43969718 43969816 -209286767 - L1ME4a LINE L1 -93 6028 5936 265 285 57 8 chr2 43969963 43970086 -209286497 - L1ME4a LINE L1 -299 5822 5694 1761 104 39 72 chr2 43970237 43970544 -209286039 + AluSx SINE Alu 1 297 -15 271 236 22 45 chr2 43970749 43970838 -209285745 + MER94 DNA DNA 5 91 -43 627 318 23 0 chr2 43970874 43971047 -209285536 + L2 LINE L2 2577 2753 -561 249 303 107 13 chr2 43971095 43971231 -209285352 + MIR SINE MIR 2 142 -66 261 163 0 0 chr2 43972017 43972066 -209284517 + CT-rich Low_complexity Low_complexity 1 49 0 * 318 148 0 0 chr2 43972058 43972112 -209284471 + (TTTTC)n Simple_repeat Simple_repeat 5 58 0 1556 206 0 40 chr2 43972131 43972456 -209284127 - AluJo SINE Alu 0 312 1 235 296 198 12 chr2 43972913 43972994 -209283589 - MIR SINE MIR -68 140 45 2405 81 3 3 chr2 43973467 43973775 -209282808 - AluSc SINE Alu -1 308 1 1047 104 110 0 chr2 43974342 43974506 -209282077 + AluSp SINE Alu 116 297 -16 1904 150 0 40 chr2 43974583 43974909 -209281674 - AluSq SINE Alu 0 313 1 1400 112 121 0 chr2 43975449 43975698 -209280885 + MER7A DNA MER2_type 40 316 -30 1709 198 3 7 chr2 43976046 43976354 -209280229 - AluJb SINE Alu -5 307 1 354 259 9 9 chr2 43976762 43976878 -209279705 - L1M4 LINE L1 -878 5268 5153 1753 144 28 10 chr2 43976881 43977172 -209279411 - AluJb SINE Alu -8 304 9 254 259 0 12 chr2 43977223 43977304 -209279279 - L1M4 LINE L1 -1125 5021 4942 21 0 0 0 chr2 43977383 43977404 -209279179 + AT_rich Low_complexity Low_complexity 1 21 0 217 339 92 28 chr2 43978423 43978532 -209278051 + MIR SINE MIR 8 123 -139 221 239 0 0 chr2 43978545 43978612 -209277971 + (TTAA)n Simple_repeat Simple_repeat 3 69 0 1672 157 28 7 chr2 43979443 43979729 -209276854 - AluJb SINE Alu -16 296 5 634 259 54 6 chr2 43980278 43980444 -209276139 + MIR SINE MIR 3 176 -86 214 337 66 18 chr2 43980590 43980756 -209275827 - L2 LINE L2 -1605 1709 1536 850 144 0 29 chr2 43980792 43980931 -209275652 + FLAM_C SINE Alu 1 135 -8 2231 72 0 53 chr2 43982397 43982701 -209273882 + AluY SINE Alu 1 288 -23 736 213 50 26 chr2 43983580 43983772 -209272811 - MIR SINE MIR -1 261 67 2181 179 52 41 chr2 43983814 43984169 -209272414 + L1MA7 LINE L1 5589 5953 -338 2333 97 0 3 chr2 43984169 43984469 -209272114 + AluSx SINE Alu 1 299 -13 2181 179 52 41 chr2 43984469 43984628 -209271955 + L1MA7 LINE L1 5953 6109 -182 577 183 0 0 chr2 43984628 43984721 -209271862 + AluJ/FLAM SINE Alu 1 93 -219 1338 198 0 27 chr2 43984741 43984785 -209271798 + AluJo SINE Alu 50 94 -218 3013 91 84 0 chr2 43984785 43985203 -209271380 - MLT2A2 LTR ERVL 0 453 1 1338 198 0 27 chr2 43985203 43985416 -209271167 + AluJo SINE Alu 94 300 -12 836 193 16 16 chr2 43985417 43985604 -209270979 + L1MA7 LINE L1 6099 6285 -6 266 298 128 73 chr2 43986210 43986308 -209270275 - MIR SINE MIR 0 262 171 1730 174 7 4 chr2 43986308 43986589 -209269994 - AluJo SINE Alu -30 282 1 266 298 128 73 chr2 43986589 43986708 -209269875 - MIR SINE MIR -91 171 33 1264 223 33 21 chr2 43986746 43987078 -209269505 - MER58B DNA MER1_type 0 341 6 206 219 0 0 chr2 43987882 43987923 -209268660 + MIR SINE MIR 220 260 -2 252 233 183 17 chr2 43988455 43988575 -209268008 - L1MC4a LINE L1 -159 7649 7555 1479 221 7 7 chr2 43988594 43988883 -209267700 - AluJo SINE Alu -23 289 1 812 138 29 96 chr2 43988883 43989123 -209267460 - L1MC4 LINE L1 -396 7646 7423 318 295 80 9 chr2 43989209 43989321 -209267262 + MIR SINE MIR 41 160 -102 31 0 0 0 chr2 43990714 43990745 -209265838 + AT_rich Low_complexity Low_complexity 1 31 0 2210 108 16 3 chr2 43990796 43991102 -209265481 - AluSg SINE Alu 0 310 1 231 100 0 0 chr2 43991121 43991161 -209265422 - Alu SINE Alu -1 301 262 344 338 55 0 chr2 43991180 43991325 -209265258 - L1ME3A LINE L1 -30 6140 5988 302 175 95 0 chr2 43991769 43991832 -209264751 - MIR SINE MIR -70 192 124 293 250 50 0 chr2 43991897 43991997 -209264586 + MER113 DNA MER1_type? 2 106 -415 2094 115 3 0 chr2 43992017 43992337 -209264246 + AluSp SINE Alu 1 321 0 2349 130 220 133 chr2 43992349 43992881 -209263702 - L1MC3 LINE L1 -22 7763 7051 330 210 0 49 chr2 43992881 43992962 -209263621 - MLT1F1 LTR MaLR -445 122 46 2349 130 220 133 chr2 43992962 43993220 -209263363 - L1MC3 LINE L1 -734 7051 6817 274 231 62 0 chr2 43993320 43993385 -209263198 + MER113 DNA MER1_type? 320 388 -133 2074 141 7 3 chr2 43994206 43994512 -209262071 - AluSx SINE Alu -2 310 4 258 293 71 10 chr2 43995216 43995315 -209261268 + MIR3 SINE MIR 2 106 -102 1003 175 179 45 chr2 43995543 43995834 -209260749 - L1ME3A LINE L1 -88 6082 5753 25 0 0 0 chr2 43996108 43996133 -209260450 + AT_rich Low_complexity Low_complexity 1 25 0 185 237 0 0 chr2 43996308 43996346 -209260237 - L2 LINE L2 -4 3268 3231 1471 220 137 23 chr2 43996904 43997400 -209259183 - MLT1H1 LTR MaLR -10 585 6 1776 173 25 0 chr2 43997439 43997722 -209258861 - AluJb SINE Alu -22 290 1 319 307 80 12 chr2 43997892 43998055 -209258528 - L1MC4 LINE L1 -1 8041 7868 2053 138 3 16 chr2 43998282 43998594 -209257989 - AluSx SINE Alu -4 308 1 2402 87 0 0 chr2 43998600 43998910 -209257673 - AluSg SINE Alu 0 310 1 461 287 171 31 chr2 43999652 43999910 -209256673 - L3b LINE CR1 -71 1512 1219 3146 128 62 8 chr2 44000387 44000887 -209255696 + MER1A DNA MER1_type 1 527 0 622 230 0 30 chr2 44001197 44001332 -209255251 - FLAM_A SINE Alu -2 131 1 1321 181 13 4 chr2 44001569 44001806 -209254777 - MER8 DNA MER2_type 0 239 1 2112 116 0 26 chr2 44002005 44002316 -209254267 + AluSx SINE Alu 1 303 -9 7555 116 48 20 chr2 44002552 44003773 -209252810 + Tigger1 DNA MER2_type 1 1254 -1164 1848 164 10 7 chr2 44003773 44003947 -209252636 - AluJb SINE Alu -6 306 134 231 114 0 0 chr2 44003947 44003991 -209252592 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2083 124 0 0 chr2 44003991 44004273 -209252310 - AluSq SINE Alu -31 282 1 1848 164 10 7 chr2 44004273 44004402 -209252181 - AluJb SINE Alu -177 135 1 30 0 0 0 chr2 44004554 44004584 -209251999 + AT_rich Low_complexity Low_complexity 1 30 0 1541 188 66 6 chr2 44004664 44004983 -209251600 + MER58B DNA MER1_type 4 341 0 2190 80 0 24 chr2 44005152 44005474 -209251109 - AluY SINE Alu 0 315 1 3432 175 50 15 chr2 44006411 44007137 -209249446 - L1MB8 LINE L1 0 6178 5428 3279 156 65 5 chr2 44007137 44007766 -209248817 - L1MB4 LINE L1 0 6180 5510 406 171 0 0 chr2 44007771 44007847 -209248736 - L1MB4 LINE L1 -791 5387 5312 * 547 266 115 27 chr2 44007841 44008179 -209248404 - L1ME LINE L1 -538 5632 5265 203 303 91 0 chr2 44008258 44008324 -209248259 + L2 LINE L2 3242 3313 0 1492 144 13 47 chr2 44008634 44008747 -209247836 + L1MA8 LINE L1 5999 6114 -177 2085 104 4 0 chr2 44008747 44009063 -209247520 + AluSg SINE Alu 1 317 0 1492 144 13 47 chr2 44009063 44009246 -209247337 + L1MA8 LINE L1 6114 6286 -5 1203 176 83 70 chr2 44009474 44009776 -209246807 - AluJb SINE Alu -6 306 1 21 0 0 0 chr2 44009843 44009864 -209246719 + AT_rich Low_complexity Low_complexity 1 21 0 1467 172 102 25 chr2 44009958 44010283 -209246300 + Tigger2a DNA MER2_type 1 350 -84 1957 158 0 3 chr2 44010500 44010810 -209245773 - AluSx SINE Alu -3 309 1 365 290 91 16 chr2 44011957 44012143 -209244440 - L2 LINE L2 -926 2388 2189 425 355 47 61 chr2 44012203 44012631 -209243952 - L2 LINE L2 -1324 1990 1569 261 0 0 0 chr2 44013077 44013106 -209243477 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1111 163 126 29 chr2 44013411 44013650 -209242933 - AluJo SINE Alu -15 297 36 1589 155 127 29 chr2 44015946 44016085 -209240498 - MER7A DNA MER2_type -2693 345 221 3238 138 33 6 chr2 44016085 44016598 -209239985 - MER1A DNA MER1_type 0 527 1 1589 155 127 29 chr2 44016598 44016774 -209239809 - MER7A DNA MER2_type -2817 221 1 258 361 41 10 chr2 44017854 44017951 -209238632 + L2 LINE L2 2659 2758 -556 338 354 50 17 chr2 44018562 44018743 -209237840 - L2 LINE L2 -421 2893 2707 606 217 37 12 chr2 44018752 44018913 -209237670 + MER104 DNA Tc2 16 180 0 1197 234 78 5 chr2 44019154 44019525 -209237058 + L1M4 LINE L1 4944 5341 -805 1868 160 0 22 chr2 44019587 44019906 -209236677 + AluJb SINE Alu 1 312 0 322 204 97 21 chr2 44019908 44020001 -209236582 + L1MB5 LINE L1 3100 3199 -2947 2029 161 77 0 chr2 44020052 44020431 -209236152 + L1MB5 LINE L1 5485 5892 -282 226 152 43 0 chr2 44020445 44020491 -209236092 + L1MB5 LINE L1 5987 6034 -140 2230 75 4 0 chr2 44020495 44020798 -209235785 - AluY SINE Alu 0 304 1 768 153 33 0 chr2 44020798 44020948 -209235635 + L1MB4 LINE L1 6018 6172 -8 2388 66 0 7 chr2 44022968 44023269 -209233314 + AluY SINE Alu 1 299 -12 29 28 0 0 chr2 44023790 44023826 -209232757 + AT_rich Low_complexity Low_complexity 1 36 0 2069 118 3 0 chr2 44023826 44024114 -209232469 - AluSp SINE Alu -24 289 1 2106 134 0 0 chr2 44024381 44024671 -209231912 + AluSx SINE Alu 3 292 -20 2511 74 0 3 chr2 44025133 44025444 -209231139 - AluY SINE Alu -1 310 1 959 107 0 15 chr2 44025446 44025577 -209231006 - AluJo/FLAM SINE Alu -181 131 3 2096 119 7 0 chr2 44025586 44025880 -209230703 - AluSx SINE Alu -16 296 1 202 224 0 20 chr2 44026541 44026590 -209229993 + GA-rich Low_complexity Low_complexity 4 51 0 2445 79 0 0 chr2 44028813 44029117 -209227466 - AluSc SINE Alu -5 304 1 2103 96 0 4 chr2 44029166 44029438 -209227145 - AluSc SINE Alu -33 276 6 1882 143 13 32 chr2 44029518 44029832 -209226751 - AluJb SINE Alu -4 308 1 391 326 82 30 chr2 44029941 44030076 -209226507 - MER5B DNA MER1_type -20 158 17 1733 119 32 77 chr2 44030507 44030819 -209225764 - AluSx SINE Alu -14 298 1 974 141 0 0 chr2 44030819 44030954 -209225629 - AluSq/x SINE Alu -177 135 1 1713 163 11 0 chr2 44031779 44032056 -209224527 - AluJo SINE Alu -30 282 3 21 0 0 0 chr2 44032065 44032086 -209224497 + AT_rich Low_complexity Low_complexity 1 21 0 226 338 122 0 chr2 44032140 44032279 -209224304 + MIR SINE MIR 51 206 -56 293 250 45 114 chr2 44032297 44032419 -209224164 - L2 LINE L2 -896 2418 2309 558 264 167 22 chr2 44032419 44032646 -209223937 + MIR SINE MIR 1 260 -2 866 200 30 1 chr2 44033530 44033830 -209222753 - MER2 DNA MER2_type 0 345 6 1643 191 7 3 chr2 44033859 44034152 -209222431 - AluJo SINE Alu -18 294 1 23 0 0 0 chr2 44034664 44034687 -209221896 + AT_rich Low_complexity Low_complexity 1 23 0 744 280 175 50 chr2 44034805 44035187 -209221396 - L2 LINE L2 0 3313 2884 203 246 82 0 chr2 44035515 44035576 -209221007 + MIR3 SINE MIR 112 177 -31 1314 158 10 5 chr2 44035691 44035900 -209220683 + AluJo SINE Alu 1 210 -102 1775 182 7 0 chr2 44036311 44036608 -209219975 - AluJb SINE Alu -13 299 1 22 0 0 0 chr2 44036697 44036719 -209219864 + AT_rich Low_complexity Low_complexity 1 22 0 1927 98 94 4 chr2 44037235 44037511 -209219072 + AluSx SINE Alu 1 301 -11 646 142 47 0 chr2 44037891 44037997 -209218586 - AluSp SINE Alu -202 111 1 185 299 26 39 chr2 44039172 44039249 -209217334 + MIR3 SINE MIR 132 207 -1 1075 201 94 10 chr2 44040485 44040784 -209215799 - MER33 DNA MER1_type 0 324 1 419 260 31 0 chr2 44040856 44040952 -209215631 + MIR3 SINE MIR 98 196 -12 234 288 47 13 chr2 44041072 44041150 -209215433 - MIR SINE MIR -125 83 3 518 281 88 56 chr2 44041574 44041859 -209214724 + MER102a DNA MER1_type 2 295 -35 192 239 125 34 chr2 44042066 44042154 -209214429 - MIR SINE MIR -54 208 113 2440 78 3 0 chr2 44042985 44043281 -209213302 - AluSg SINE Alu -13 297 1 2109 137 0 3 chr2 44043705 44044018 -209212565 + AluSx SINE Alu 1 312 0 2135 125 7 7 chr2 44044068 44044363 -209212220 + AluSq SINE Alu 3 297 -16 2262 163 95 26 chr2 44044533 44044876 -209211707 - L1PA16 LINE L1 -330 5836 5518 2342 64 0 55 chr2 44044876 44045188 -209211395 - AluY SINE Alu -16 295 1 216 0 0 0 chr2 44045196 44045220 -209211363 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2262 163 95 26 chr2 44045220 44045497 -209211086 - L1PA16 LINE L1 -654 5512 5177 25 31 0 0 chr2 44045684 44045716 -209210867 + AT_rich Low_complexity Low_complexity 1 32 0 1462 161 141 20 chr2 44045812 44046117 -209210466 - MER2 DNA MER2_type -1 343 2 2272 106 0 3 chr2 44046526 44046827 -209209756 + AluSg SINE Alu 1 300 -10 378 246 51 46 chr2 44046919 44047101 -209209482 + MIR SINE MIR 2 212 -50 345 344 93 38 chr2 44047434 44047725 -209208858 + L2 LINE L2 3005 3311 -2 1540 158 25 22 chr2 44047828 44048106 -209208477 - AluJb SINE Alu -33 279 1 22 80 0 0 chr2 44048907 44048957 -209207626 + AT_rich Low_complexity Low_complexity 1 50 0 530 331 52 0 chr2 44049129 44049380 -209207203 + L1MC4a LINE L1 5665 5928 -1880 207 0 0 0 chr2 44050482 44050505 -209206078 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 636 175 8 33 chr2 44050505 44050625 -209205958 - FLAM_A SINE Alu -16 117 1 239 271 47 47 chr2 44050789 44050874 -209205709 + MIR3 SINE MIR 111 195 -13 736 217 64 72 chr2 44050938 44051001 -209205582 + MIR SINE MIR 12 74 -188 2172 125 0 3 chr2 44051001 44051313 -209205270 - AluY SINE Alu 0 311 1 736 217 64 72 chr2 44051313 44051484 -209205099 + MIR SINE MIR 74 244 -18 496 319 179 16 chr2 44054710 44055146 -209201437 + L2 LINE L2 2035 2541 -773 1863 144 0 59 chr2 44055200 44055520 -209201063 + AluSx SINE Alu 1 301 -11 21 57 0 0 chr2 44055737 44055772 -209200811 + AT_rich Low_complexity Low_complexity 1 35 0 26 58 0 29 chr2 44055822 44055858 -209200725 + AT_rich Low_complexity Low_complexity 1 36 -31 1835 149 0 20 chr2 44055858 44056153 -209200430 + AluJb SINE Alu 1 289 -23 26 58 0 29 chr2 44056153 44056185 -209200398 + AT_rich Low_complexity Low_complexity 36 67 0 936 281 140 9 chr2 44056194 44056813 -209199770 + L1ME3A LINE L1 4459 4996 -1166 2215 108 7 16 chr2 44056813 44057120 -209199463 - AluSx SINE Alu -8 304 1 936 281 140 9 chr2 44057120 44057468 -209199115 + L1ME3A LINE L1 4996 5559 -603 1401 264 63 16 chr2 44057635 44058202 -209198381 + L1ME3A LINE L1 5565 6169 -1 1681 147 38 3 chr2 44058523 44058815 -209197768 - AluJo SINE Alu -10 302 1 22 56 0 0 chr2 44058962 44058998 -209197585 + AT_rich Low_complexity Low_complexity 1 36 0 2170 102 3 3 chr2 44059030 44059323 -209197260 - AluSg1 SINE Alu -16 293 1 2050 135 0 3 chr2 44059828 44060125 -209196458 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr2 44061892 44061913 -209194670 + (TC)n Simple_repeat Simple_repeat 2 22 0 285 243 0 14 chr2 44062253 44062327 -209194256 - Tigger5 DNA MER2_type 0 2323 2251 2211 163 7 49 chr2 44064781 44065091 -209191492 - L1MB7 LINE L1 -9 6175 5888 2265 100 13 0 chr2 44065091 44065400 -209191183 - AluSq SINE Alu 0 313 1 2211 163 7 49 chr2 44065400 44065538 -209191045 - L1MB7 LINE L1 -296 5888 5746 235 317 29 48 chr2 44066197 44066301 -209190282 + MIR SINE MIR 43 144 -64 26 50 0 0 chr2 44067562 44067602 -209188981 + AT_rich Low_complexity Low_complexity 1 40 0 701 188 14 0 chr2 44067624 44067768 -209188815 - L1MA6 LINE L1 -5 6295 6150 285 203 94 109 chr2 44067775 44067903 -209188680 - MIR SINE MIR -74 188 63 2295 107 0 0 chr2 44067948 44068248 -209188335 - AluSx SINE Alu -12 300 1 2471 63 0 0 chr2 44069058 44069360 -209187223 + AluY SINE Alu 1 302 -9 364 257 33 86 chr2 44070104 44070256 -209186327 - L2 LINE L2 -4 3309 3166 1993 107 11 0 chr2 44070275 44070538 -209186045 + AluSx SINE Alu 25 290 -22 709 148 70 0 chr2 44070552 44070667 -209185916 + FLAM_C SINE Alu 9 131 -12 22 56 0 0 chr2 44070962 44070998 -209185585 + AT_rich Low_complexity Low_complexity 1 36 0 198 290 122 38 chr2 44071863 44071899 -209184684 - MIR SINE MIR -12 250 218 2392 70 10 32 chr2 44071899 44072213 -209184370 - AluY SINE Alu -4 307 1 198 290 122 38 chr2 44072213 44072307 -209184276 - MIR SINE MIR -44 218 109 207 0 0 0 chr2 44073056 44073079 -209183504 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 1944 126 11 3 chr2 44073084 44073369 -209183214 - AluSq SINE Alu -26 287 1 1732 141 45 24 chr2 44073636 44073927 -209182656 + AluJb SINE Alu 2 298 -14 3483 170 88 37 chr2 44074010 44074538 -209182045 - L1MB7 LINE L1 -27 6157 5657 1871 161 0 40 chr2 44074538 44074862 -209181721 + AluJo SINE Alu 1 311 -1 3483 170 88 37 chr2 44074862 44075328 -209181255 - L1MB7 LINE L1 -527 5657 5114 1207 210 10 26 chr2 44075331 44075636 -209180947 - L1MB7 LINE L1 -1078 5068 4769 351 213 0 0 chr2 44075687 44075767 -209180816 + CT-rich Low_complexity Low_complexity 4 83 0 1999 144 10 3 chr2 44075769 44076060 -209180523 - AluSx SINE Alu -19 293 1 1642 122 111 8 chr2 44076705 44076967 -209179616 + AluJb SINE Alu 6 294 -18 31 44 0 0 chr2 44077261 44077306 -209179277 + AT_rich Low_complexity Low_complexity 1 45 0 755 171 0 0 chr2 44077307 44077424 -209179159 - FLAM_C SINE Alu -26 117 1 2456 118 52 59 chr2 44077654 44077972 -209178611 + MER4B LTR ERV1 1 320 -459 2240 102 0 0 chr2 44077972 44078267 -209178316 - AluY SINE Alu -16 295 1 2456 118 52 59 chr2 44078267 44078361 -209178222 + MER4B LTR ERV1 320 413 -366 2294 84 0 26 chr2 44078361 44078670 -209177913 - AluY SINE Alu -10 301 1 2456 118 52 59 chr2 44078670 44078855 -209177728 + MER4B LTR ERV1 413 770 -9 2102 102 3 33 chr2 44079060 44079364 -209177219 + AluSx SINE Alu 1 295 -17 2303 92 0 3 chr2 44079492 44079785 -209176798 + AluSx SINE Alu 2 293 -19 1548 193 7 29 chr2 44081008 44081314 -209175269 + AluJo SINE Alu 3 301 -11 401 136 17 0 chr2 44083604 44083663 -209172920 + MIR SINE MIR 2 61 -201 1536 152 81 27 chr2 44084122 44084418 -209172165 - AluJo SINE Alu 0 312 1 236 345 0 23 chr2 44084541 44084628 -209171955 - MIR SINE MIR -92 116 32 479 243 65 8 chr2 44085027 44085171 -209171412 + MIR SINE MIR 34 184 -67 719 139 0 33 chr2 44085636 44085758 -209170825 + FLAM_C SINE Alu 16 133 -10 411 330 87 23 chr2 44085773 44085946 -209170637 + MIR SINE MIR 31 214 -48 2357 64 7 3 chr2 44086516 44086812 -209169771 + AluY SINE Alu 1 297 -14 280 222 74 94 chr2 44086863 44087066 -209169517 - MLT1J LTR MaLR -140 371 173 332 314 163 15 chr2 44087148 44087473 -209169110 + L1M4 LINE L1 4286 4658 -1488 317 320 47 16 chr2 44087498 44087626 -209168957 + L1M4 LINE L1 4777 4908 -1238 419 294 8 0 chr2 44087684 44087810 -209168773 - MER3 DNA MER1_type -78 131 5 190 152 217 0 chr2 44087872 44087918 -209168665 + MER5B DNA MER1_type 123 178 0 2022 131 9 38 chr2 44089069 44089389 -209167194 + AluSx SINE Alu 1 311 -1 2033 128 17 3 chr2 44089427 44089723 -209166860 + AluSx SINE Alu 1 300 -12 1885 160 0 10 chr2 44089748 44090042 -209166541 + AluJb SINE Alu 1 291 -21 422 73 0 15 chr2 44090986 44091054 -209165529 + (TA)n Simple_repeat Simple_repeat 2 68 0 3157 156 60 27 chr2 44091960 44092014 -209164569 - L1MB8 LINE L1 0 6178 6127 2250 112 0 0 chr2 44092014 44092309 -209164274 + AluSx SINE Alu 1 295 -17 3157 156 60 27 chr2 44092309 44092930 -209163653 - L1MB8 LINE L1 -51 6127 5484 21 0 0 0 chr2 44093519 44093540 -209163043 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr2 44094717 44094741 -209161842 + AT_rich Low_complexity Low_complexity 1 24 0 1906 114 21 17 chr2 44099477 44099766 -209156817 + AluJb SINE Alu 2 291 -21 1976 119 3 33 chr2 44099961 44100264 -209156319 - AluSx SINE Alu -2 310 17 233 158 146 82 chr2 44100345 44100453 -209156130 + L1MC5 LINE L1 7545 7668 -293 2141 136 0 0 chr2 44100453 44100755 -209155828 + AluSx SINE Alu 1 302 -10 233 158 146 82 chr2 44100755 44100804 -209155779 + L1MC5 LINE L1 7668 7712 -249 295 250 281 12 chr2 44100978 44101138 -209155445 - MIR SINE MIR -52 210 8 301 226 80 51 chr2 44102275 44102412 -209154171 - L2 LINE L2 -3 3310 3170 921 228 193 35 chr2 44102676 44103158 -209153425 + L1MD2 LINE L1 5785 6342 -17 180 179 0 0 chr2 44104976 44105015 -209151568 + CT-rich Low_complexity Low_complexity 2 40 0 229 353 37 14 chr2 44105092 44105310 -209151273 - L1ME3 LINE L1 -67 6095 5873 2056 197 198 43 chr2 44109470 44109985 -209146598 - Charlie2 DNA MER1_type -6 2856 2423 2213 102 3 0 chr2 44109985 44110278 -209146305 + AluY SINE Alu 1 294 -17 2056 197 198 43 chr2 44110278 44110515 -209146068 - Charlie2 DNA MER1_type -439 2423 2224 2365 105 0 0 chr2 44110515 44110819 -209145764 + AluSp SINE Alu 1 304 -9 2056 197 198 43 chr2 44110819 44110932 -209145651 - Charlie2 DNA MER1_type -638 2224 1855 497 276 135 24 chr2 44110902 44111199 -209145384 - Charlie2 DNA MER1_type -2435 347 18 * 1453 161 82 14 chr2 44111911 44112190 -209144393 + AluJo SINE Alu 1 298 -14 24 67 0 0 chr2 44112225 44112270 -209144313 + AT_rich Low_complexity Low_complexity 1 45 0 1351 137 184 20 chr2 44112324 44112579 -209144004 - AluSx SINE Alu -15 297 1 722 310 71 15 chr2 44112588 44112981 -209143602 + L1MC4 LINE L1 5421 5835 -1973 2312 95 3 0 chr2 44113054 44113350 -209143233 + AluSp SINE Alu 1 297 -16 2311 217 140 81 chr2 44113396 44114052 -209142531 + L1MC4 LINE L1 6848 7464 -578 2136 129 0 3 chr2 44114052 44114346 -209142237 + AluSc SINE Alu 2 294 -15 2311 217 140 81 chr2 44114346 44114422 -209142161 + L1MC4 LINE L1 7464 7534 -508 3190 149 51 27 chr2 44114422 44115045 -209141538 + L1MB8 LINE L1 5536 6173 -5 2311 217 140 81 chr2 44115045 44115439 -209141144 + L1MC4 LINE L1 7534 8042 0 23 0 0 0 chr2 44116548 44116571 -209140012 + AT_rich Low_complexity Low_complexity 1 23 0 1854 154 3 33 chr2 44117106 44117411 -209139172 + AluJb SINE Alu 1 296 -16 1475 185 83 0 chr2 44117597 44117862 -209138721 - AluJo SINE Alu -25 287 1 1588 187 19 22 chr2 44119327 44119691 -209136892 + L1MB8 LINE L1 5816 6178 0 522 300 92 13 chr2 44120258 44120485 -209136098 - MIR SINE MIR 0 262 18 2489 90 0 0 chr2 44121129 44121440 -209135143 - AluSx SINE Alu -1 311 1 432 195 16 57 chr2 44121442 44121565 -209135018 - AluJb SINE Alu -10 302 185 1027 234 47 38 chr2 44121566 44121908 -209134675 + L2 LINE L2 2962 3306 -7 1832 164 17 7 chr2 44122059 44122352 -209134231 + AluJb SINE Alu 1 296 -16 1622 181 13 20 chr2 44122722 44123026 -209133557 - AluJo SINE Alu -10 302 1 1316 198 34 4 chr2 44123421 44123684 -209132899 - L1M4 LINE L1 -544 5640 5370 594 226 0 44 chr2 44124265 44124402 -209132181 + FLAM_A SINE Alu 2 132 -1 347 216 36 63 chr2 44124429 44124540 -209132043 + L1ME2 LINE L1 5770 5877 -285 572 261 31 0 chr2 44124540 44124670 -209131913 + FRAM SINE Alu 1 133 -43 706 222 87 34 chr2 44124670 44124877 -209131706 + L1ME2 LINE L1 5912 6129 -35 833 108 8 16 chr2 44125311 44125440 -209131143 - FLAM_C SINE Alu -5 128 1 315 184 48 48 chr2 44125728 44125831 -209130752 - MIR SINE MIR -132 130 28 688 188 123 6 chr2 44127833 44128003 -209128580 - MIR SINE MIR -68 194 5 2105 125 6 16 chr2 44128278 44128591 -209127992 - AluJb SINE Alu -2 310 1 1683 11 0 0 chr2 44129506 44129686 -209126897 + AluY SINE Alu 123 302 -9 2143 137 0 0 chr2 44130759 44131065 -209125518 + AluSq SINE Alu 1 306 -7 2025 128 21 0 chr2 44131562 44131851 -209124732 + AluJb SINE Alu 1 295 -17 200 264 100 0 chr2 44131871 44131952 -209124631 + MIR SINE MIR 32 123 -85 287 266 0 13 chr2 44132632 44132711 -209123872 + MIR SINE MIR 47 124 -84 318 174 330 0 chr2 44134017 44134132 -209122451 + MIR SINE MIR 96 248 -14 193 138 0 0 chr2 44134236 44134265 -209122318 + L2 LINE L2 3226 3254 -18 2420 93 0 0 chr2 44135756 44136066 -209120517 + AluY SINE Alu 1 310 -1 976 176 118 0 chr2 44136232 44136419 -209120164 + MER3 DNA MER1_type 1 209 0 1965 147 13 7 chr2 44136503 44136803 -209119780 + AluJo SINE Alu 1 302 -10 575 259 105 22 chr2 44138443 44138671 -209117912 + MIR SINE MIR 16 262 0 1312 91 10 35 chr2 44138714 44138911 -209117672 - AluSg/x SINE Alu 0 312 121 339 25 0 0 chr2 44138978 44139018 -209117565 + (TG)n Simple_repeat Simple_repeat 1 40 0 1245 128 44 0 chr2 44139030 44139233 -209117350 - L1MB3 LINE L1 -39 6144 5933 1908 147 0 13 chr2 44139234 44139534 -209117049 - AluJb SINE Alu -15 297 2 313 184 312 37 chr2 44139549 44139658 -209116925 + L2 LINE L2 3134 3272 0 1793 162 16 23 chr2 44139954 44140263 -209116320 + AluJo SINE Alu 3 309 -3 401 262 74 47 chr2 44140438 44140462 -209116121 + L1ME4a LINE L1 5593 5615 -506 2353 67 7 23 chr2 44140462 44140762 -209115821 + AluSc SINE Alu 1 295 -14 401 262 74 47 chr2 44140762 44140993 -209115590 + L1ME4a LINE L1 5615 5855 -266 836 233 147 22 chr2 44141031 44141459 -209115124 - MLT1J LTR MaLR -1 510 1 290 198 190 33 chr2 44141488 44141609 -209114974 + L1ME4a LINE L1 5981 6120 -1 2373 84 10 0 chr2 44141904 44142201 -209114382 + AluSp SINE Alu 1 300 -13 482 244 107 66 chr2 44143020 44143123 -209113460 - L1MC/D LINE L1 -2009 5799 5702 1660 178 21 11 chr2 44143123 44143410 -209113173 + AluJo SINE Alu 1 290 -22 207 0 0 0 chr2 44143410 44143433 -209113150 + (TG)n Simple_repeat Simple_repeat 2 24 0 482 244 107 66 chr2 44143433 44143570 -209113013 - L1MC/D LINE L1 -2105 5703 5548 308 256 16 39 chr2 44143787 44143916 -209112667 - L1MC/D LINE L1 -662 5504 5379 2391 95 0 0 chr2 44144141 44144437 -209112146 + AluSc SINE Alu 1 296 -13 654 178 76 54 chr2 44144574 44144632 -209111951 + MER53 DNA DNA 1 56 -133 477 167 167 83 chr2 44144632 44144752 -209111831 + FLAM_A SINE Alu 1 130 -3 654 178 76 54 chr2 44144752 44144878 -209111705 + MER53 DNA DNA 56 189 0 2510 175 46 28 chr2 44144914 44145318 -209111265 - MLT1D LTR MaLR 0 505 88 2251 99 3 0 chr2 44145318 44145637 -209110946 - AluSx SINE Alu 0 320 1 2510 175 46 28 chr2 44145637 44145727 -209110856 - MLT1D LTR MaLR -417 88 1 191 256 70 23 chr2 44145863 44145949 -209110634 + L2 LINE L2 3179 3268 -4 2271 119 0 0 chr2 44146674 44146976 -209109607 - AluSx SINE Alu -7 305 4 231 279 16 0 chr2 44147529 44147590 -209108993 - L2 LINE L2 0 3313 3252 2322 78 3 7 chr2 44148185 44148479 -209108104 - AluSc SINE Alu -16 293 1 3198 110 25 41 chr2 44150945 44151303 -209105280 - MER34B LTR ERV1 -54 511 162 2469 93 0 0 chr2 44151303 44151616 -209104967 + AluSq SINE Alu 1 313 0 3198 110 25 41 chr2 44151616 44151774 -209104809 - MER34B LTR ERV1 -403 162 3 281 338 56 14 chr2 44152227 44152369 -209104214 + L2 LINE L2 3087 3234 -38 2287 105 0 0 chr2 44152414 44152709 -209103874 - AluSq SINE Alu -18 295 1 296 299 8 34 chr2 44153357 44153474 -209103109 + MIR3 SINE MIR 8 121 -87 435 226 110 92 chr2 44153817 44153863 -209102720 - L1ME4a LINE L1 -53 6068 6024 1108 174 186 52 chr2 44153863 44154207 -209102376 - MLT1B LTR MaLR 0 390 1 435 226 110 92 chr2 44154207 44154320 -209102263 - L1ME4a LINE L1 -97 6024 5914 2130 135 3 0 chr2 44154320 44154631 -209101952 - AluSx SINE Alu 0 312 1 435 226 110 92 chr2 44154631 44154807 -209101776 - L1ME4a LINE L1 -207 5914 5726 259 330 116 0 chr2 44154840 44154952 -209101631 - L1ME4a LINE L1 -477 5644 5520 1263 213 0 14 chr2 44154962 44155248 -209101335 - L1MD3 LINE L1 0 7995 7714 2916 3 0 0 chr2 44157010 44157316 -209099267 - AluYa5 SINE Alu -5 306 1 2418 176 29 2 chr2 44157907 44158356 -209098227 - LOR1b LTR ERV1 0 461 1 638 238 25 19 chr2 44158465 44158625 -209097958 + MIR SINE MIR 86 246 -16 610 217 65 148 chr2 44158648 44158695 -209097888 - MLT1J LTR MaLR -60 451 402 2226 118 0 0 chr2 44158695 44158992 -209097591 + AluSx SINE Alu 3 299 -13 610 217 65 148 chr2 44158992 44159201 -209097382 - MLT1J LTR MaLR -109 402 227 2285 116 0 0 chr2 44159201 44159495 -209097088 - AluSx SINE Alu -18 294 1 610 217 65 148 chr2 44159495 44159574 -209097009 - MLT1J LTR MaLR -284 227 143 417 269 84 0 chr2 44159557 44159676 -209096907 - MLT1J LTR MaLR -312 199 71 * 517 71 0 14 chr2 44159923 44159993 -209096590 + MER4B LTR ERV1 1 69 -595 1598 101 34 22 chr2 44160006 44160308 -209096275 + MER4B LTR ERV1 261 610 0 909 241 104 21 chr2 44160498 44160834 -209095749 + HAL1 LINE L1 11 374 -2133 368 45 0 0 chr2 44160834 44160878 -209095705 + AluY SINE Alu 1 44 -258 1995 176 5 35 chr2 44161006 44161087 -209095496 - MER47A DNA MER2_type -1959 364 282 1752 170 17 14 chr2 44161087 44161381 -209095202 + AluJo SINE Alu 1 295 -17 1995 176 5 35 chr2 44161381 44161674 -209094909 - MER47A DNA MER2_type -2041 282 1 534 266 102 44 chr2 44162243 44162391 -209094192 + L1MC4a LINE L1 5673 5811 -1997 2094 113 51 0 chr2 44162391 44162683 -209093900 + AluSq SINE Alu 1 307 -6 534 266 102 44 chr2 44162683 44162808 -209093775 + L1MC4a LINE L1 5811 5962 -1846 238 252 122 9 chr2 44163065 44163172 -209093411 + L1ME4a LINE L1 5972 6090 -31 2413 91 0 0 chr2 44163356 44163707 -209092876 + AluY SINE Alu 1 311 0 339 170 44 77 chr2 44164351 44164459 -209092124 - L1MEd LINE L1 -751 5378 5284 2088 137 3 10 chr2 44164459 44164773 -209091810 - AluJb SINE Alu 0 312 1 339 170 44 77 chr2 44164773 44164827 -209091756 - L1MEd LINE L1 -845 5284 5230 189 0 0 0 chr2 44164944 44164965 -209091618 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 944 157 0 7 chr2 44165388 44165535 -209091048 + AluJb SINE Alu 149 294 -18 283 244 17 11 chr2 44166496 44166672 -209089911 + (TA)n Simple_repeat Simple_repeat 2 178 0 198 118 0 0 chr2 44166835 44166869 -209089714 + (TA)n Simple_repeat Simple_repeat 2 35 0 1806 156 21 7 chr2 44166869 44167152 -209089431 - AluJo SINE Alu -25 287 1 770 150 0 0 chr2 44167187 44167333 -209089250 + AluSg/x SINE Alu 172 317 0 2168 177 171 0 chr2 44167348 44167788 -209088795 + MLT2B2 LTR ERVL 1 515 0 913 118 0 0 chr2 44167818 44167945 -209088638 + FLAM_C SINE Alu 1 127 -6 884 277 127 22 chr2 44167945 44168538 -209088045 - L1MEd LINE L1 -1111 5018 4364 2051 136 0 7 chr2 44168562 44168857 -209087726 - AluJb SINE Alu -19 293 1 1793 148 54 3 chr2 44168882 44169179 -209087404 - AluSx SINE Alu 0 312 1 887 143 0 0 chr2 44169179 44169305 -209087278 - AluJo SINE Alu -176 136 11 601 300 61 32 chr2 44169316 44169693 -209086890 - L1MEd LINE L1 -2417 3712 3325 1947 140 3 3 chr2 44169860 44170152 -209086431 + AluSx SINE Alu 1 292 -20 461 250 98 83 chr2 44170666 44170857 -209085726 - L1MEd LINE L1 -2866 3263 3076 2151 116 0 17 chr2 44170857 44171020 -209085563 - AluSx SINE Alu -16 296 139 2468 70 3 0 chr2 44171020 44171320 -209085263 - AluY SINE Alu -10 301 1 2151 116 0 17 chr2 44171320 44171457 -209085126 - AluSx SINE Alu -173 139 1 461 250 98 83 chr2 44171457 44171639 -209084944 - L1MEd LINE L1 -3053 3076 2898 2153 125 3 3 chr2 44171639 44171934 -209084649 - AluSp SINE Alu -18 295 1 461 250 98 83 chr2 44171934 44171959 -209084624 - L1MEd LINE L1 -3231 2898 2875 2235 116 0 7 chr2 44171959 44172262 -209084321 + AluSg SINE Alu 1 301 -9 461 250 98 83 chr2 44172262 44172381 -209084202 - L1MEd LINE L1 -3254 2875 2736 1616 131 45 4 chr2 44172592 44172836 -209083747 - AluJb SINE Alu -12 300 47 7737 176 30 93 chr2 44172836 44174705 -209081878 + MER52A LTR ERV1 1 1753 -2 271 170 31 15 chr2 44174711 44174776 -209081807 - AluS SINE Alu -244 59 3 26 30 0 0 chr2 44174776 44174809 -209081774 + AT_rich Low_complexity Low_complexity 1 33 0 2131 130 16 3 chr2 44174836 44175144 -209081439 + AluJb SINE Alu 1 312 0 1995 257 45 30 chr2 44175413 44176074 -209080509 - L1MC4a LINE L1 -1841 5950 5280 692 300 56 40 chr2 44176285 44176900 -209079683 - L1MC4a LINE L1 -1071 5058 4430 2090 145 0 0 chr2 44176900 44177197 -209079386 - AluSx SINE Alu -15 297 1 692 300 56 40 chr2 44177197 44177238 -209079345 - L1MC4a LINE L1 -1699 4430 4391 415 284 80 56 chr2 44177895 44178145 -209078438 - L1MEd LINE L1 -3575 2554 2299 339 177 29 6 chr2 44178344 44178414 -209078169 - Alu SINE Alu -1 300 236 1167 156 0 127 chr2 44178422 44178697 -209077886 - AluJo SINE Alu -50 262 23 2595 96 25 3 chr2 44179000 44179365 -209077218 - THE1C LTR MaLR -2 373 1 26 0 0 0 chr2 44179521 44179547 -209077036 + AT_rich Low_complexity Low_complexity 1 26 0 499 283 112 51 chr2 44179562 44180530 -209076053 - L1MEd LINE L1 -839 1651 663 774 300 45 5 chr2 44180839 44181062 -209075521 + MLT1I LTR MaLR 164 395 -14 256 86 29 0 chr2 44181108 44181173 -209075410 + Alu SINE Alu 246 311 0 1872 133 104 129 chr2 44181177 44181327 -209075256 + L1MA6 LINE L1 5802 5954 -346 1673 138 3 57 chr2 44181327 44181610 -209074973 + AluSx SINE Alu 1 268 -44 1872 133 104 129 chr2 44181610 44181750 -209074833 + L1MA6 LINE L1 5954 6096 -204 651 205 25 0 chr2 44181750 44181872 -209074711 + FLAM_A SINE Alu 5 129 -4 1872 133 104 129 chr2 44181872 44181961 -209074622 + L1MA6 LINE L1 6096 6186 -114 1990 128 44 10 chr2 44181961 44182258 -209074325 + AluSx SINE Alu 1 307 -5 1872 133 104 129 chr2 44182258 44182365 -209074218 + L1MA6 LINE L1 6186 6278 -22 2095 122 21 0 chr2 44182383 44182671 -209073912 + AluSx SINE Alu 3 296 -16 1857 152 0 4 chr2 44182749 44183026 -209073557 - AluJb SINE Alu -26 286 11 2349 107 0 3 chr2 44183105 44183415 -209073168 + AluSg SINE Alu 1 309 -1 1131 126 27 27 chr2 44183427 44183800 -209072783 - L1MB4 LINE L1 -13 6167 5716 289 164 33 0 chr2 44184078 44184139 -209072444 - L1MB2 LINE L1 -3 6168 6106 2353 76 0 52 chr2 44184638 44184967 -209071616 - AluSx SINE Alu 0 312 1 2368 91 0 25 chr2 44185355 44185675 -209070908 + AluSq SINE Alu 1 312 -1 475 281 46 7 chr2 44185677 44185830 -209070753 + MIR SINE MIR 28 186 -76 2311 107 3 3 chr2 44185922 44186230 -209070353 + AluSq SINE Alu 1 308 -5 375 294 59 15 chr2 44186612 44186748 -209069835 - L2 LINE L2 -5 3308 3167 24 32 0 0 chr2 44186911 44186942 -209069641 + AT_rich Low_complexity Low_complexity 1 31 0 321 307 40 45 chr2 44187473 44187553 -209069030 + L1ME LINE L1 5461 5540 -581 1847 168 96 6 chr2 44187553 44187916 -209068667 + MSTD LTR MaLR 1 396 0 321 307 40 45 chr2 44187916 44188037 -209068546 + L1ME LINE L1 5540 5661 -460 1435 110 9 14 chr2 44190614 44190833 -209065750 + AluSg/x SINE Alu 85 302 -10 23 0 0 0 chr2 44191483 44191506 -209065077 + AT_rich Low_complexity Low_complexity 1 23 0 2032 126 3 7 chr2 44192740 44193034 -209063549 + AluJb SINE Alu 5 297 -15 2073 132 13 13 chr2 44193594 44193904 -209062679 + AluSx SINE Alu 3 312 0 2213 140 0 0 chr2 44194252 44194560 -209062023 + AluSx SINE Alu 2 309 -3 660 132 0 0 chr2 44194457 44194563 -209062020 + AluSg/x SINE Alu 205 310 0 359 197 14 0 chr2 44194929 44195000 -209061583 - ERVL LTR ERVL -2943 2821 2750 1639 186 0 4 chr2 44195499 44195768 -209060815 + AluJb SINE Alu 1 268 -44 441 0 0 0 chr2 44195778 44195827 -209060756 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1608 199 9 22 chr2 44195882 44196198 -209060385 + AluJb SINE Alu 1 312 0 2081 132 14 3 chr2 44196242 44196538 -209060045 + AluSx SINE Alu 1 299 -13 2189 107 7 3 chr2 44197170 44197470 -209059113 + AluSx SINE Alu 1 301 -11 186 71 0 0 chr2 44198349 44198377 -209058206 + (A)n Simple_repeat Simple_repeat 1 28 0 1317 212 79 3 chr2 44198377 44198693 -209057890 + L1MB7 LINE L1 3951 4290 -1856 1489 158 31 73 chr2 44198693 44198871 -209057712 + MLT2B3 LTR ERVL 1 163 -391 2052 125 4 0 chr2 44198871 44199176 -209057407 + AluSx SINE Alu 1 306 0 1489 158 31 73 chr2 44199176 44199313 -209057270 + MLT2B3 LTR ERVL 163 304 -250 4529 151 72 114 chr2 44199314 44199584 -209056999 + L1MB7 LINE L1 4398 4678 -1506 1743 170 13 35 chr2 44199584 44199901 -209056682 + AluJo SINE Alu 1 310 -2 4529 151 72 114 chr2 44199901 44199986 -209056597 + L1MB7 LINE L1 4678 4765 -1419 889 99 0 0 chr2 44199986 44200107 -209056476 + AluSp/q SINE Alu 189 309 -4 4529 151 72 114 chr2 44200107 44200435 -209056148 + L1MB7 LINE L1 4765 5105 -1079 2313 92 0 16 chr2 44200435 44200739 -209055844 + AluSq SINE Alu 1 299 -14 4529 151 72 114 chr2 44200739 44201821 -209054762 + L1MB7 LINE L1 5105 6184 0 2267 124 0 0 chr2 44203070 44203377 -209053206 + AluSq SINE Alu 1 307 -6 478 100 14 0 chr2 44203607 44203677 -209052906 + FLAM SINE Alu 63 133 -10 33 66 0 0 chr2 44204619 44204680 -209051903 + AT_rich Low_complexity Low_complexity 1 61 0 1998 133 0 17 chr2 44204682 44204975 -209051608 - AluSx SINE Alu -23 289 2 195 129 0 0 chr2 44205001 44205032 -209051551 + (A)n Simple_repeat Simple_repeat 1 31 0 2251 97 14 0 chr2 44205066 44205356 -209051227 - AluSq SINE Alu -19 294 1 21 0 0 0 chr2 44205892 44205913 -209050670 + AT_rich Low_complexity Low_complexity 1 21 0 1698 175 7 30 chr2 44206512 44206815 -209049768 + AluJo SINE Alu 1 296 -16 385 211 16 0 chr2 44207116 44207239 -209049344 + (TA)n Simple_repeat Simple_repeat 2 126 0 181 288 30 0 chr2 44207856 44207922 -209048661 + MIR3 SINE MIR 110 177 -31 1836 162 0 22 chr2 44210193 44210507 -209046076 + AluJb SINE Alu 1 307 -5 2103 133 0 0 chr2 44211147 44211440 -209045143 - AluSx SINE Alu -19 293 1 2280 99 0 13 chr2 44211588 44211892 -209044691 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 44211910 44211934 -209044649 + AT_rich Low_complexity Low_complexity 1 24 0 688 153 0 2 chr2 44212272 44212508 -209044075 + AluJ SINE Alu 1 293 -19 233 237 0 0 chr2 44212679 44212738 -209043845 - L1MC4 LINE L1 -1339 6703 6645 * 1400 253 152 14 chr2 44212715 44212930 -209043653 - L1MC4 LINE L1 -1849 5959 5775 1664 156 3 75 chr2 44212930 44213237 -209043346 - AluJo SINE Alu -14 298 14 1400 253 152 14 chr2 44213237 44213582 -209043001 - L1MC4 LINE L1 -2033 5775 5322 376 267 11 0 chr2 44213708 44213758 -209042825 + MER58B DNA MER1_type 1 54 -287 378 0 0 0 chr2 44213758 44213800 -209042783 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 376 267 11 0 chr2 44213800 44213839 -209042744 + MER58B DNA MER1_type 54 91 -250 1183 185 8 48 chr2 44214007 44214121 -209042462 - MER8 DNA MER2_type 0 239 122 2373 58 41 3 chr2 44214121 44214415 -209042168 + AluYa5 SINE Alu 1 305 -6 1183 185 8 48 chr2 44214415 44214549 -209042034 - MER8 DNA MER2_type -117 122 1 1183 186 35 18 chr2 44214655 44214881 -209041702 + MER58B DNA MER1_type 79 308 -33 1302 117 0 0 chr2 44214924 44215095 -209041488 - AluSg/x SINE Alu -5 307 137 469 118 0 0 chr2 44215095 44215163 -209041420 - AluJ/FLAM SINE Alu -243 69 2 195 182 0 23 chr2 44215441 44215485 -209041098 + MIR3 SINE MIR 161 203 -5 536 250 21 26 chr2 44216075 44216259 -209040324 - MIR SINE MIR -39 223 45 2342 111 0 0 chr2 44216336 44216643 -209039940 + AluSx SINE Alu 1 307 -5 1664 131 0 105 chr2 44216710 44216856 -209039727 + AluJo SINE Alu 2 96 -218 2405 83 0 3 chr2 44216856 44217146 -209039437 + AluSx SINE Alu 1 289 -23 1664 131 0 105 chr2 44217146 44217345 -209039238 + AluJo SINE Alu 96 314 0 637 211 12 25 chr2 44217345 44217506 -209039077 + L1M4 LINE L1 5178 5336 -810 742 86 9 0 chr2 44217523 44217628 -209038955 - L1MA3 LINE L1 0 6305 6200 216 0 0 0 chr2 44217633 44217657 -209038926 + (TA)n Simple_repeat Simple_repeat 2 25 0 2205 90 49 0 chr2 44217767 44218055 -209038528 - AluSx SINE Alu -10 302 1 338 273 13 65 chr2 44218287 44218302 -209038281 - L2 LINE L2 0 3313 3299 1950 171 0 3 chr2 44218302 44218611 -209037972 - AluJb SINE Alu -4 308 1 338 273 13 65 chr2 44218611 44218749 -209037834 - L2 LINE L2 -14 3299 3168 2259 115 0 0 chr2 44218756 44219061 -209037522 + AluSx SINE Alu 1 305 -7 545 118 39 39 chr2 44219088 44219190 -209037393 - L1MC1 LINE L1 0 6333 6232 430 187 24 36 chr2 44219192 44219358 -209037225 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 752 157 0 99 chr2 44219359 44219466 -209037117 - L1MC1 LINE L1 -94 6239 6154 1893 151 7 3 chr2 44219466 44219764 -209036819 + AluJo SINE Alu 1 299 -13 752 157 0 99 chr2 44219764 44219828 -209036755 - L1MC1 LINE L1 -179 6154 6085 424 250 0 62 chr2 44219885 44220013 -209036570 - L2 LINE L2 -255 3058 2939 1647 158 9 53 chr2 44220129 44220451 -209036132 - AluJb SINE Alu -4 308 1 1493 194 30 4 chr2 44220633 44220901 -209035682 + AluJo SINE Alu 1 275 -37 1521 198 14 7 chr2 44220906 44221189 -209035394 + AluJo SINE Alu 10 294 -18 1625 106 141 4 chr2 44221191 44221488 -209035095 + AluSx SINE Alu 1 332 0 22 56 0 0 chr2 44221605 44221641 -209034942 + AT_rich Low_complexity Low_complexity 1 36 0 1841 153 0 31 chr2 44221641 44221935 -209034648 - AluJo SINE Alu -27 285 1 661 174 58 97 chr2 44221940 44222033 -209034550 - L1MC5 LINE L1 -36 7925 7830 2242 109 14 0 chr2 44222033 44222327 -209034256 + AluSx SINE Alu 1 298 -14 661 174 58 97 chr2 44222327 44222440 -209034143 - L1MC5 LINE L1 -131 7830 7727 264 176 8 199 chr2 44222729 44222801 -209033782 + MIR SINE MIR 49 87 -175 2184 113 3 0 chr2 44222801 44223092 -209033491 - AluY SINE Alu -15 296 5 264 176 8 199 chr2 44223092 44223150 -209033433 + MIR SINE MIR 87 154 -108 800 161 8 0 chr2 44223411 44223541 -209033042 + FLAM_C SINE Alu 1 131 -2 1937 125 7 24 chr2 44223667 44223963 -209032620 + AluSx SINE Alu 1 291 -21 2192 107 3 19 chr2 44223976 44224286 -209032297 + AluSq SINE Alu 1 305 -8 709 209 0 8 chr2 44224342 44224476 -209032107 - FLAM_A SINE Alu 0 133 1 1094 107 6 24 chr2 44224486 44224654 -209031929 + LTR39 LTR ERV1 1 165 -618 4020 85 5 14 chr2 44224656 44225207 -209031376 + MER41A LTR ERV1 3 548 -6 1187 103 5 33 chr2 44225207 44225391 -209031192 - AluSg/x SINE Alu 0 310 132 2260 108 7 0 chr2 44225391 44225688 -209030895 - AluSq SINE Alu -14 299 1 3439 138 32 81 chr2 44225712 44226218 -209030365 + LTR39 LTR ERV1 164 632 -151 2051 124 0 14 chr2 44226218 44226509 -209030074 - AluSx SINE Alu -25 287 1 3439 138 32 81 chr2 44226509 44226653 -209029930 + LTR39 LTR ERV1 632 782 -1 1016 204 139 118 chr2 44226740 44227095 -209029488 + MER34B LTR ERV1 1 374 -191 2411 77 0 0 chr2 44227095 44227393 -209029190 + AluY SINE Alu 1 298 -13 1016 204 139 118 chr2 44227393 44227590 -209028993 + MER34B LTR ERV1 374 565 0 1751 123 95 25 chr2 44227651 44227796 -209028787 - AluSx SINE Alu -7 305 172 2175 106 3 0 chr2 44227796 44228078 -209028505 - AluSx SINE Alu -20 292 10 1751 123 95 25 chr2 44228078 44228217 -209028366 - AluSx SINE Alu -140 172 1 298 87 22 0 chr2 44228251 44228297 -209028286 - L1MA10 LINE L1 -7 6327 6281 2380 100 0 0 chr2 44228493 44228794 -209027789 - AluSg SINE Alu -9 301 1 223 255 112 31 chr2 44228813 44228911 -209027672 - L2 LINE L2 -7 3306 3201 620 279 159 21 chr2 44228988 44229372 -209027211 - L2 LINE L2 -339 2975 2539 2407 71 0 14 chr2 44229924 44230221 -209026362 + AluY SINE Alu 2 294 -17 260 314 23 0 chr2 44231076 44231162 -209025421 + (CATATA)n Simple_repeat Simple_repeat 1 88 0 403 277 13 67 chr2 44231163 44231181 -209025402 - L1MC4a LINE L1 -1849 5959 5942 2373 100 3 0 chr2 44231181 44231491 -209025092 - AluSx SINE Alu -1 311 1 403 277 13 67 chr2 44231491 44231588 -209024995 - L1MC4a LINE L1 -1866 5942 5859 1914 146 30 3 chr2 44231588 44231883 -209024700 + AluJo SINE Alu 2 304 -8 403 277 13 67 chr2 44231883 44231990 -209024593 - L1MC4a LINE L1 -1949 5859 5748 222 314 116 0 chr2 44232032 44232153 -209024430 - MIR SINE MIR -59 203 69 381 287 39 44 chr2 44232202 44232383 -209024200 - L1MC4a LINE L1 -2066 5742 5563 1793 195 0 0 chr2 44232528 44232831 -209023752 - AluJb SINE Alu -9 303 1 460 110 268 0 chr2 44232834 44232916 -209023667 - L1MB7 LINE L1 -10 6174 6071 2191 106 0 20 chr2 44232925 44233227 -209023356 - AluSg SINE Alu -14 296 1 885 166 7 0 chr2 44233231 44233370 -209023213 - AluJo SINE Alu -169 143 4 509 194 39 10 chr2 44233431 44233534 -209023049 - L2 LINE L2 0 3313 3208 693 162 0 0 chr2 44233568 44233673 -209022910 + FLAM_A SINE Alu 22 126 -16 373 270 92 79 chr2 44233727 44234229 -209022354 - L2 LINE L2 -168 3145 2626 367 198 0 58 chr2 44234503 44234589 -209021994 + MER58B DNA MER1_type 3 83 -258 2222 110 10 0 chr2 44234589 44234881 -209021702 + AluSx SINE Alu 1 295 -17 493 204 28 0 chr2 44234885 44234993 -209021590 - FLAM_A SINE Alu 0 142 32 1667 129 19 4 chr2 44234993 44235256 -209021327 + MER58B DNA MER1_type 75 341 0 312 253 55 0 chr2 44235294 44235385 -209021198 + MIR SINE MIR 65 160 -102 2113 124 0 22 chr2 44235623 44235938 -209020645 - AluSx SINE Alu -1 311 4 1863 169 3 10 chr2 44235995 44236308 -209020275 - AluJo SINE Alu -1 311 1 1124 133 93 49 chr2 44236542 44236768 -209019815 + MER46A DNA MER2_type 1 236 0 1872 154 18 0 chr2 44237139 44237424 -209019159 + AluJb SINE Alu 1 290 -22 582 167 44 9 chr2 44237430 44237544 -209019039 + Charlie1 DNA MER1_type 2640 2757 -4 836 259 57 4 chr2 44237544 44237772 -209018811 + Charlie2 DNA MER1_type 74 313 -2469 2121 139 0 0 chr2 44237785 44238073 -209018510 - AluSx SINE Alu -24 288 1 1142 52 0 0 chr2 44238107 44238242 -209018341 + AluY SINE Alu 165 299 -12 315 0 0 0 chr2 44238246 44238281 -209018302 + (TG)n Simple_repeat Simple_repeat 2 36 0 233 196 0 0 chr2 44238281 44238327 -209018256 + L1MC4 LINE L1 6658 6703 -1339 1280 256 164 26 chr2 44238489 44239115 -209017468 + L1MC4a LINE L1 5352 6064 -1744 904 145 14 0 chr2 44239362 44239507 -209017076 - FRAM SINE Alu -10 166 20 2460 88 0 0 chr2 44239530 44239837 -209016746 - AluSx SINE Alu -5 307 1 722 185 0 0 chr2 44240000 44240119 -209016464 + AluJo SINE Alu 1 119 -193 575 77 13 0 chr2 44240114 44240192 -209016391 - AluSg1 SINE Alu -229 80 2 * 978 215 5 5 chr2 44240194 44240403 -209016180 + AluJo SINE Alu 102 310 -2 1071 85 0 0 chr2 44241280 44241410 -209015173 + AluSp SINE Alu 1 130 -183 207 0 0 0 chr2 44241410 44241433 -209015150 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 209 48 16 111 chr2 44243739 44243802 -209012781 + (CGGGA)n Simple_repeat Simple_repeat 3 59 0 196 188 62 0 chr2 44247526 44247574 -209009009 - L3b LINE CR1 0 1583 1533 180 0 0 0 chr2 44247587 44247607 -209008976 + (A)n Simple_repeat Simple_repeat 1 20 0 199 338 29 29 chr2 44247756 44247895 -209008688 + L2 LINE L2 2605 2743 -571 2014 106 6 40 chr2 44247902 44248223 -209008360 + AluSq SINE Alu 1 310 -3 2265 81 0 0 chr2 44248283 44248578 -209008005 + AluSg SINE Alu 1 295 -15 469 283 49 34 chr2 44248599 44248804 -209007779 + MIR SINE MIR 44 251 -11 3233 153 114 2 chr2 44249335 44249938 -209006645 - LTR51 LTR ERV1 0 671 1 678 172 15 22 chr2 44250016 44250150 -209006433 + L1MA9 LINE L1 6005 6137 -175 1599 68 10 0 chr2 44250150 44250356 -209006227 - AluSp SINE Alu -17 296 89 2004 114 7 0 chr2 44250651 44250952 -209005631 + AluSq SINE Alu 2 304 0 2307 81 3 0 chr2 44250952 44251262 -209005321 + AluY SINE Alu 1 311 0 25 0 0 0 chr2 44251262 44251287 -209005296 + AT_rich Low_complexity Low_complexity 1 25 0 270 106 0 0 chr2 44251333 44251380 -209005203 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 2027 138 3 0 chr2 44253146 44253450 -209003133 + AluSx SINE Alu 1 305 -7 1832 137 20 17 chr2 44253595 44253895 -209002688 - AluSx SINE Alu -11 301 1 1719 169 7 10 chr2 44253897 44254205 -209002378 - AluJo SINE Alu -5 307 1 2118 91 0 7 chr2 44254243 44254573 -209002010 - AluSx SINE Alu 0 328 1 651 209 35 0 chr2 44254575 44254690 -209001893 - FLAM_A SINE Alu -16 126 8 189 0 0 0 chr2 44254704 44254725 -209001858 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2112 101 3 0 chr2 44254728 44255014 -209001569 - AluSg SINE Alu -23 287 1 1232 67 0 18 chr2 44255023 44255234 -209001349 - AluY SINE Alu 0 328 121 1419 72 10 16 chr2 44255234 44255428 -209001155 - AluY SINE Alu -117 194 2 835 158 8 0 chr2 44256058 44256191 -209000392 + AluJo SINE Alu 2 135 -177 2085 118 0 0 chr2 44256192 44256498 -209000085 + AluSq SINE Alu 1 306 -7 2080 123 0 3 chr2 44256504 44256806 -208999777 + AluSq SINE Alu 1 301 -12 1912 113 53 10 chr2 44256809 44257109 -208999474 + AluSq SINE Alu 1 313 0 2084 100 20 3 chr2 44257118 44257419 -208999164 + AluSx SINE Alu 1 306 -6 4233 135 31 33 chr2 44257436 44257909 -208998674 + L1MC3 LINE L1 6706 7178 -607 1585 168 40 0 chr2 44257909 44258183 -208998400 + AluJo SINE Alu 1 285 -27 558 0 0 0 chr2 44258183 44258245 -208998338 + (CA)n Simple_repeat Simple_repeat 2 63 0 4233 135 31 33 chr2 44258245 44258538 -208998045 + L1MC3 LINE L1 7176 7472 -313 2096 122 0 0 chr2 44258538 44258841 -208997742 + AluSx SINE Alu 1 303 -9 628 160 76 8 chr2 44258843 44258962 -208997621 + FLAM_A SINE Alu 1 127 -6 1573 179 28 0 chr2 44258982 44259273 -208997310 + AluSq SINE Alu 1 299 -14 219 323 97 21 chr2 44259394 44259580 -208997003 + L2 LINE L2 2170 2369 -945 1768 142 54 3 chr2 44259785 44260080 -208996503 - AluJo SINE Alu -2 310 1 1931 181 133 29 chr2 44260272 44260725 -208995858 + MLT1F1 LTR MaLR 67 566 -1 2170 119 3 0 chr2 44260958 44261268 -208995315 - AluSx SINE Alu -1 311 1 1200 156 0 15 chr2 44261734 44261933 -208994650 + AluJo SINE Alu 7 202 -110 249 108 0 0 chr2 44261969 44262006 -208994577 + (GGAA)n Simple_repeat Simple_repeat 3 39 0 1788 158 3 7 chr2 44262021 44262324 -208994259 - AluJo SINE Alu -10 302 1 255 271 105 64 chr2 44262443 44262842 -208993741 + MLT1J LTR MaLR 13 425 -21 1684 147 3 18 chr2 44262845 44263160 -208993423 + AluJb SINE Alu 1 311 0 1921 97 0 75 chr2 44263519 44263838 -208992745 - AluY SINE Alu -16 295 1 1247 45 0 0 chr2 44264172 44264329 -208992254 - L1PA4 LINE L1 0 6155 5999 1686 135 7 17 chr2 44264398 44264687 -208991896 - AluSq SINE Alu 0 313 28 907 66 22 44 chr2 44264690 44264873 -208991710 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1657 173 0 10 chr2 44264873 44265174 -208991409 - AluSx SINE Alu -14 298 1 782 165 0 15 chr2 44265443 44265576 -208991007 - FLAM_A SINE Alu 0 133 3 386 241 25 86 chr2 44265834 44265908 -208990675 - L2 LINE L2 -1 3312 3252 2633 129 20 67 chr2 44265908 44265988 -208990595 + MER101 LTR ERV1 2 84 -390 2232 109 0 0 chr2 44265988 44266292 -208990291 + AluSc SINE Alu 1 304 -5 2633 129 20 67 chr2 44266292 44266707 -208989876 + MER101 LTR ERV1 84 474 0 386 241 25 86 chr2 44266707 44266794 -208989789 - L2 LINE L2 -61 3252 3161 294 67 0 44 chr2 44266807 44266852 -208989731 + L1MC3 LINE L1 7409 7451 -334 31 0 0 0 chr2 44266858 44266889 -208989694 + AT_rich Low_complexity Low_complexity 1 31 0 568 277 8 0 chr2 44266926 44267056 -208989527 + FLAM_A SINE Alu 3 133 0 2063 115 0 13 chr2 44267134 44267439 -208989144 - AluY SINE Alu -10 301 1 2121 100 3 0 chr2 44267442 44267732 -208988851 - AluSx SINE Alu -19 293 3 443 268 27 18 chr2 44267802 44267914 -208988669 + MIR SINE MIR 20 132 -130 2030 155 69 3 chr2 44267949 44268324 -208988259 - MER57A LTR ERV1 0 403 4 2190 69 14 0 chr2 44269120 44269411 -208987172 + AluSq SINE Alu 1 295 -18 1376 85 16 0 chr2 44269427 44269615 -208986968 + AluY SINE Alu 6 196 -115 198 0 0 0 chr2 44270028 44270050 -208986533 + (TA)n Simple_repeat Simple_repeat 2 23 0 520 174 0 43 chr2 44270050 44270142 -208986441 - FRAM SINE Alu -15 161 74 6408 107 8 28 chr2 44270143 44270576 -208986007 - L1MA2 LINE L1 -113 6191 5751 234 0 0 0 chr2 44270576 44270602 -208985981 + (TG)n Simple_repeat Simple_repeat 2 27 0 1951 127 3 0 chr2 44270602 44270886 -208985697 - AluSx SINE Alu -27 285 1 6408 107 8 28 chr2 44270886 44271771 -208984812 - L1MA2 LINE L1 -551 5753 4892 3442 170 89 36 chr2 44271770 44272234 -208984349 + L1MB2 LINE L1 5323 5848 -323 * 2140 103 23 0 chr2 44272234 44272536 -208984047 + AluSx SINE Alu 1 309 -3 3442 170 89 36 chr2 44272536 44272871 -208983712 + L1MB2 LINE L1 5848 6164 -7 282 288 0 0 chr2 44272890 44272949 -208983634 - tRNA-Leu-CTT tRNA tRNA -5 80 22 559 148 222 9 chr2 44272962 44273070 -208983513 - FLAM_C SINE Alu -11 132 2 1288 196 22 53 chr2 44273283 44273604 -208982979 + AluJo SINE Alu 1 311 -1 233 223 20 54 chr2 44273702 44273850 -208982733 + (TATAA)n Simple_repeat Simple_repeat 3 145 0 1454 165 55 24 chr2 44274044 44274335 -208982248 + AluJb SINE Alu 1 300 -12 557 237 40 50 chr2 44274846 44275007 -208981576 - MIR SINE MIR 0 262 102 1503 184 10 33 chr2 44275007 44275312 -208981271 + AluJb SINE Alu 1 298 -14 557 237 40 50 chr2 44275312 44275348 -208981235 - MIR SINE MIR -160 102 67 472 98 0 0 chr2 44275370 44275431 -208981152 + Alu SINE Alu 2 62 -247 378 0 0 0 chr2 44275432 44275474 -208981109 + (CA)n Simple_repeat Simple_repeat 1 42 0 944 156 12 0 chr2 44275476 44275636 -208980947 + FRAM SINE Alu 1 162 -14 619 198 9 18 chr2 44275644 44275755 -208980828 + FLAM_A SINE Alu 1 110 -32 2026 85 3 11 chr2 44276737 44277019 -208979564 + AluSq SINE Alu 19 298 -15 226 274 86 8 chr2 44277048 44277165 -208979418 - L1MC5 LINE L1 -79 7882 7757 440 182 8 83 chr2 44277477 44277499 -208979084 + L1MD3 LINE L1 7871 7893 -102 2308 84 0 0 chr2 44277499 44277798 -208978785 + AluY SINE Alu 1 299 -12 440 182 8 83 chr2 44277798 44277886 -208978697 + L1MD3 LINE L1 7893 7974 -21 1358 187 52 4 chr2 44277886 44278154 -208978429 + AluJo SINE Alu 1 281 -31 26 64 0 0 chr2 44278172 44278219 -208978364 + AT_rich Low_complexity Low_complexity 1 47 0 188 360 0 40 chr2 44278350 44278425 -208978158 - L2 LINE L2 -185 3087 3016 2275 103 0 0 chr2 44278684 44278995 -208977588 + AluY SINE Alu 1 311 0 1912 117 58 0 chr2 44280221 44280512 -208976071 + AluSx SINE Alu 1 308 -4 611 148 0 10 chr2 44282070 44282171 -208974412 - AluJ/FLAM SINE Alu -211 101 2 187 298 0 0 chr2 44282516 44282563 -208974020 + L2 LINE L2 3006 3052 -261 1146 217 52 72 chr2 44282911 44283010 -208973573 + L1ME LINE L1 4958 5057 -1107 2082 135 0 0 chr2 44283010 44283321 -208973262 - AluJb SINE Alu -1 311 1 1146 217 52 72 chr2 44283321 44283799 -208972784 + L1ME LINE L1 5057 5531 -633 1673 144 65 82 chr2 44283799 44283928 -208972655 + MER7A DNA MER2_type 1 131 -2907 2091 123 0 7 chr2 44283928 44284237 -208972346 + AluSx SINE Alu 1 307 -5 1673 144 65 82 chr2 44284237 44284461 -208972122 + MER7A DNA MER2_type 131 346 0 1146 217 52 72 chr2 44284461 44284488 -208972095 + L1ME LINE L1 5531 5557 -607 370 162 0 15 chr2 44284488 44284556 -208972027 - MADE1 DNA Mariner -1 79 13 2355 70 0 0 chr2 44284558 44284857 -208971726 - AluSx SINE Alu -13 299 1 541 287 45 73 chr2 44284870 44285190 -208971393 + L1ME LINE L1 3329 3656 -2490 2227 104 0 0 chr2 44285190 44285488 -208971095 + AluSx SINE Alu 1 298 -14 1764 157 3 7 chr2 44285498 44285791 -208970792 + AluJb SINE Alu 7 298 -14 541 287 45 73 chr2 44285791 44285922 -208970661 + L1ME LINE L1 3665 3778 -2368 324 291 164 0 chr2 44285931 44286065 -208970518 + L1ME LINE L1 4077 4232 -1914 276 274 0 0 chr2 44286111 44286184 -208970399 - Tigger5 DNA MER2_type 0 2323 2251 * 277 208 0 0 chr2 44286154 44286207 -208970376 - Tigger5 DNA MER2_type -2269 54 2 542 261 72 80 chr2 44286221 44286477 -208970106 + L1ME LINE L1 4303 4559 -1587 2187 104 0 7 chr2 44286477 44286786 -208969797 + AluSg1 SINE Alu 1 307 -2 542 261 72 80 chr2 44286786 44286941 -208969642 + L1ME LINE L1 4559 4714 -1432 2123 107 0 0 chr2 44286941 44287239 -208969344 + AluSg SINE Alu 1 298 -12 542 261 72 80 chr2 44287239 44287601 -208968982 + L1ME LINE L1 4714 5174 -972 24 32 0 0 chr2 44288091 44288122 -208968461 + AT_rich Low_complexity Low_complexity 1 31 0 506 223 89 0 chr2 44288194 44288306 -208968277 + FLAM_C SINE Alu 1 122 -21 21 0 0 0 chr2 44288306 44288327 -208968256 + AT_rich Low_complexity Low_complexity 1 21 0 1589 152 70 4 chr2 44288403 44288673 -208967910 + AluJo SINE Alu 7 294 -18 1575 160 32 7 chr2 44288679 44288960 -208967623 + AluJo SINE Alu 1 288 -24 270 0 0 0 chr2 44288960 44288990 -208967593 + (TG)n Simple_repeat Simple_repeat 2 31 0 2224 166 111 2 chr2 44288998 44289467 -208967116 + L1MB7 LINE L1 5665 6184 0 236 160 93 40 chr2 44289463 44289538 -208967045 + L1ME LINE L1 5814 5892 -272 * 962 181 0 11 chr2 44289542 44289719 -208966864 + AluJb SINE Alu 137 311 -1 630 328 48 0 chr2 44289736 44290038 -208966545 + L1ME LINE L1 5447 5777 -385 1753 138 4 4 chr2 44290308 44290584 -208965999 - AluSx SINE Alu -16 296 21 386 169 8 0 chr2 44290590 44290708 -208965875 + (TA)n Simple_repeat Simple_repeat 2 120 0 2329 62 17 0 chr2 44290708 44291000 -208965583 - AluY SINE Alu -14 297 1 2103 101 7 0 chr2 44291148 44291444 -208965139 - AluSx SINE Alu -4 308 11 1834 91 0 0 chr2 44291674 44291916 -208964667 + AluSx SINE Alu 1 242 -70 2201 98 3 0 chr2 44292050 44292346 -208964237 + AluSx SINE Alu 1 297 -15 305 179 179 21 chr2 44292366 44292511 -208964072 - Charlie2 DNA MER1_type -202 2660 2493 252 196 186 82 chr2 44292765 44292862 -208963721 + L2 LINE L2 3161 3267 -5 300 162 114 48 chr2 44292887 44292992 -208963591 - Charlie2 DNA MER1_type -351 2511 2400 813 154 8 0 chr2 44293005 44293128 -208963455 + FRAM SINE Alu 23 146 -30 988 91 0 21 chr2 44293128 44293271 -208963312 - AluSg/x SINE Alu -10 302 163 1942 149 0 0 chr2 44293375 44293671 -208962912 - AluSx SINE Alu -16 296 1 406 250 83 15 chr2 44293715 44293847 -208962736 + MLT1A1 LTR MaLR 225 365 0 2208 108 0 0 chr2 44293987 44294292 -208962291 - AluSg SINE Alu -5 305 1 2347 78 0 0 chr2 44294302 44294597 -208961986 - AluY SINE Alu -16 295 1 1868 155 3 0 chr2 44294770 44295073 -208961510 + AluSx SINE Alu 1 304 -8 2082 78 36 39 chr2 44295622 44295930 -208960653 - AluSq SINE Alu -6 307 1 251 73 49 0 chr2 44296030 44296071 -208960512 + T-rich Low_complexity Low_complexity 2 44 0 301 117 0 100 chr2 44296071 44296093 -208960490 - MER41A LTR ERV1 -101 453 430 2358 68 3 0 chr2 44296093 44296401 -208960182 + AluY SINE Alu 1 309 -2 301 117 0 100 chr2 44296401 44296438 -208960145 - MER41A LTR ERV1 -124 430 400 236 233 27 0 chr2 44296439 44296512 -208960071 + Charlie5 DNA MER1_type 2491 2565 -47 2026 105 26 3 chr2 44296856 44297161 -208959422 + AluSq SINE Alu 1 312 -1 250 186 0 0 chr2 44297176 44297235 -208959348 - MLT1J LTR MaLR -37 474 416 359 189 0 27 chr2 44297245 44297319 -208959264 + MLT1J LTR MaLR 426 497 -14 790 158 8 0 chr2 44297337 44297464 -208959119 - FLAM_C SINE Alu -5 128 1 282 228 109 20 chr2 44297471 44297572 -208959011 + MLT1J LTR MaLR 278 387 -124 2258 87 7 0 chr2 44297646 44297944 -208958639 + AluSx SINE Alu 1 300 -12 518 167 250 0 chr2 44297960 44298068 -208958515 - AluJb SINE Alu -177 135 1 620 249 50 13 chr2 44298073 44298272 -208958311 - MLT1J LTR MaLR -292 219 18 1695 169 7 3 chr2 44298378 44298674 -208957909 + AluJo SINE Alu 1 297 -15 2228 112 0 3 chr2 44298733 44299046 -208957537 + AluSp SINE Alu 1 312 -1 2446 60 0 0 chr2 44299119 44299419 -208957164 + AluY SINE Alu 1 300 -11 935 274 43 87 chr2 44299708 44299823 -208956760 + L1MC4 LINE L1 7449 7567 -475 2221 109 0 3 chr2 44299823 44300136 -208956447 + AluSq SINE Alu 1 312 -1 935 274 43 87 chr2 44300136 44300492 -208956091 + L1MC4 LINE L1 7567 7889 -153 2254 83 0 3 chr2 44300492 44300793 -208955790 + AluY SINE Alu 1 300 -11 935 274 43 87 chr2 44300793 44300941 -208955642 + L1MC4 LINE L1 7889 8042 0 2091 121 0 9 chr2 44300967 44301282 -208955301 + AluSx SINE Alu 1 312 0 2596 29 6 0 chr2 44301300 44301613 -208954970 - AluYb8 SINE Alu -3 315 1 2529 91 27 19 chr2 44301735 44302107 -208954476 - THE1C LTR MaLR 0 375 1 1783 143 34 3 chr2 44302117 44302410 -208954173 - AluJo SINE Alu -8 304 3 1764 148 10 7 chr2 44302710 44303000 -208953583 - AluJo SINE Alu -10 302 12 1975 149 0 3 chr2 44303092 44303401 -208953182 + AluJo SINE Alu 1 308 -4 1734 153 60 131 chr2 44303477 44303572 -208953011 + MER47B DNA MER2_type 1 101 -2222 2300 74 7 0 chr2 44303572 44303870 -208952713 - AluSp SINE Alu -13 300 1 1734 153 60 131 chr2 44303870 44304224 -208952359 + MER47B DNA MER2_type 101 418 0 374 80 0 0 chr2 44304940 44304990 -208951593 - MLT2A1 LTR ERVL 0 444 395 598 169 77 87 chr2 44304991 44305495 -208951088 - Ricksha DNA DNA -1668 378 186 920 72 12 90 chr2 44305025 44305085 -208951498 - HERVL LTR ERVL -1 5653 5590 1905 128 0 17 chr2 44305085 44305396 -208951187 - AluSx SINE Alu 0 306 1 920 72 12 90 chr2 44305396 44305501 -208951082 - HERVL LTR ERVL -64 5590 5500 1395 147 5 5 chr2 44305502 44305720 -208950863 - LTR26E LTR ERV1 -129 493 276 2200 95 0 0 chr2 44305720 44306015 -208950568 - AluSg SINE Alu -15 295 1 1321 174 46 49 chr2 44306020 44306325 -208950258 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 44306369 44306390 -208950193 + AT_rich Low_complexity Low_complexity 1 21 0 458 148 0 34 chr2 44306390 44306478 -208950105 - FLAM_A SINE Alu -6 136 52 1349 145 14 82 chr2 44306478 44306705 -208949878 + MER41D LTR ERV1 3 209 -348 2147 114 0 19 chr2 44306705 44307021 -208949562 + AluSg SINE Alu 1 310 0 1349 145 14 82 chr2 44307021 44307075 -208949508 + MER41D LTR ERV1 209 265 -292 709 128 14 108 chr2 44307077 44307225 -208949358 - FLAM_C SINE Alu -8 135 2 1375 99 10 15 chr2 44307261 44307463 -208949120 - LTR26B LTR ERV1 -330 201 1 2040 146 0 0 chr2 44307637 44307946 -208948637 + AluJb SINE Alu 3 311 -1 251 245 277 0 chr2 44308129 44308223 -208948360 + MIR SINE MIR 125 244 -18 375 240 58 10 chr2 44309606 44309710 -208946873 - MER5A DNA MER1_type -37 152 44 2063 113 80 28 chr2 44309714 44309880 -208946703 - MER57B LTR ERV1 -51 383 227 2008 101 0 10 chr2 44309880 44310168 -208946415 - AluSx SINE Alu -25 287 3 2063 113 80 28 chr2 44310168 44310364 -208946219 - MER57B LTR ERV1 -207 227 2 1072 115 0 0 chr2 44310395 44310543 -208946040 - MER57B LTR ERV1 -284 150 3 335 219 123 0 chr2 44310649 44310722 -208945861 + MER44D DNA MER2_type 1 82 -623 1839 139 0 3 chr2 44310722 44311009 -208945574 + AluSx SINE Alu 1 286 -26 1743 143 0 36 chr2 44311049 44311350 -208945233 + AluJb SINE Alu 1 290 -22 578 0 49 0 chr2 44311350 44311432 -208945151 + (TA)n Simple_repeat Simple_repeat 2 87 0 2132 85 7 0 chr2 44311435 44311717 -208944866 + AluSp SINE Alu 4 287 -26 314 226 19 85 chr2 44311724 44311830 -208944753 + L1MCa LINE L1 1980 2078 -4348 312 206 10 93 chr2 44311820 44311917 -208944666 + L1MC4 LINE L1 6612 6700 -1342 * 190 81 54 0 chr2 44311919 44311956 -208944627 + (TA)n Simple_repeat Simple_repeat 1 39 0 312 270 28 107 chr2 44311956 44312171 -208944412 + L1ME4a LINE L1 5767 5964 -157 * 336 156 101 83 chr2 44312163 44312272 -208944311 - L1MCa LINE L1 -4362 2064 1954 3991 143 16 51 chr2 44312276 44312962 -208943621 + MER44D DNA MER2_type 72 605 0 1915 105 3 31 chr2 44313299 44313585 -208942998 + AluSx SINE Alu 1 278 -34 369 0 0 0 chr2 44313587 44313628 -208942955 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 1994 144 0 0 chr2 44313718 44314024 -208942559 - AluSx SINE Alu 0 312 7 665 275 100 32 chr2 44314030 44314281 -208942302 - L2 LINE L2 -18 3295 3028 2091 74 42 3 chr2 44314281 44314565 -208942018 - AluSc SINE Alu -14 295 1 633 135 10 0 chr2 44314567 44314663 -208941920 - AluJo/FLAM SINE Alu -181 131 35 368 188 125 62 chr2 44314707 44314835 -208941748 - L2 LINE L2 -361 2952 2817 657 216 12 36 chr2 44315015 44315182 -208941401 + FRAM SINE Alu 4 166 0 2167 96 0 16 chr2 44315209 44315522 -208941061 + AluSc SINE Alu 1 308 -1 1284 181 39 62 chr2 44315534 44315683 -208940900 + AluJo SINE Alu 1 152 -203 2334 58 3 0 chr2 44315683 44315978 -208940605 + AluY SINE Alu 1 296 -15 1284 181 39 62 chr2 44315978 44315993 -208940590 + AluJo SINE Alu 152 166 -189 2243 88 3 0 chr2 44315993 44316287 -208940296 + AluSp SINE Alu 1 295 -18 1284 181 39 62 chr2 44316287 44316483 -208940100 + AluJo SINE Alu 166 355 0 2130 116 0 0 chr2 44316494 44316795 -208939788 + AluSx SINE Alu 4 304 -8 1505 121 0 13 chr2 44317445 44317677 -208938906 + AluSq SINE Alu 38 266 -47 2224 81 30 0 chr2 44317721 44318017 -208938566 + AluSp SINE Alu 1 305 -8 2198 90 0 26 chr2 44318018 44318329 -208938254 + AluY SINE Alu 1 303 -8 2108 107 0 0 chr2 44318329 44318655 -208937928 + AluSx SINE Alu 1 326 0 884 98 0 0 chr2 44319637 44319760 -208936823 + AluSg/x SINE Alu 138 260 -52 478 75 0 85 chr2 44319762 44319856 -208936727 + Alu SINE Alu 226 311 0 854 268 38 55 chr2 44320619 44320736 -208935847 + L2 LINE L2 1996 2114 -1200 361 206 123 112 chr2 44320736 44320778 -208935805 + MER5B DNA MER1_type 4 44 -134 2035 100 10 35 chr2 44320778 44321089 -208935494 - AluSp SINE Alu -10 303 1 1773 115 27 24 chr2 44321099 44321394 -208935189 - AluSx SINE Alu -16 296 1 361 206 123 112 chr2 44321394 44321510 -208935073 + MER5B DNA MER1_type 52 175 -3 854 268 38 55 chr2 44321510 44321735 -208934848 + L2 LINE L2 2114 2332 -982 2235 100 0 0 chr2 44321759 44322059 -208934524 + AluSx SINE Alu 1 300 -12 335 320 112 34 chr2 44322072 44322136 -208934447 + L2 LINE L2 2480 2538 -776 2069 79 9 70 chr2 44322136 44322452 -208934131 + AluSp SINE Alu 1 297 -16 335 320 112 34 chr2 44322452 44322593 -208933990 + L2 LINE L2 2538 2701 -613 27 0 0 0 chr2 44322593 44322620 -208933963 + AT_rich Low_complexity Low_complexity 1 27 0 1346 103 61 5 chr2 44322636 44322849 -208933734 - AluSx SINE Alu -87 225 1 1327 108 5 0 chr2 44323001 44323187 -208933396 + AluSg/x SINE Alu 114 300 -12 242 262 0 16 chr2 44323200 44323261 -208933322 + L2 LINE L2 2480 2539 -775 644 106 0 4 chr2 44323265 44323501 -208933082 + AluSx SINE Alu 2 324 0 1986 119 0 7 chr2 44323533 44323828 -208932755 + AluSx SINE Alu 6 298 -14 500 316 140 7 chr2 44323844 44324146 -208932437 + L2 LINE L2 2722 3059 -254 2341 90 0 0 chr2 44324218 44324528 -208932055 - AluSx SINE Alu -2 310 1 1443 205 115 41 chr2 44324791 44325226 -208931357 - MLT1C LTR MaLR 0 467 1 327 285 157 48 chr2 44325676 44326136 -208930447 + L2 LINE L2 2243 2752 -562 1518 109 38 0 chr2 44326149 44326360 -208930223 - AluSx SINE Alu -87 225 7 2098 113 3 0 chr2 44326370 44326671 -208929912 - AluY SINE Alu -9 302 1 537 16 0 0 chr2 44326682 44326744 -208929839 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 2029 86 14 4 chr2 44326748 44327026 -208929557 - AluSq SINE Alu -32 281 1 2151 102 0 3 chr2 44327688 44327981 -208928602 - AluSg SINE Alu -18 292 1 1386 167 92 27 chr2 44328080 44328373 -208928210 - AluJb SINE Alu 0 312 1 395 275 92 44 chr2 44328570 44328628 -208927955 - MIR SINE MIR -8 254 200 2037 108 3 17 chr2 44328628 44328923 -208927660 + AluSq SINE Alu 1 291 -22 395 275 92 44 chr2 44328923 44329093 -208927490 - MIR SINE MIR -62 200 15 199 271 76 76 chr2 44329744 44329862 -208926721 + MIR SINE MIR 8 125 -137 294 236 104 19 chr2 44330106 44330212 -208926371 - MIR SINE MIR -50 212 98 23 0 0 0 chr2 44330221 44330244 -208926339 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr2 44331595 44331643 -208924940 + GC_rich Low_complexity Low_complexity 1 48 0 204 40 0 0 chr2 44332084 44332109 -208924474 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 29 0 0 0 chr2 44333417 44333446 -208923137 + AT_rich Low_complexity Low_complexity 1 29 0 684 155 9 0 chr2 44333473 44333589 -208922994 + FLAM_C SINE Alu 1 117 -16 28 29 0 0 chr2 44333589 44333624 -208922959 + AT_rich Low_complexity Low_complexity 1 35 0 2258 87 6 6 chr2 44333624 44333936 -208922647 + AluSp SINE Alu 1 312 -1 1961 103 40 20 chr2 44334006 44334306 -208922277 + AluSx SINE Alu 1 306 -6 2304 81 3 0 chr2 44334561 44334858 -208921725 + AluSp SINE Alu 1 298 -15 2199 76 7 7 chr2 44334891 44335182 -208921401 + AluY SINE Alu 1 291 -20 1519 170 54 0 chr2 44335205 44335481 -208921102 + AluJb SINE Alu 9 299 -13 2025 135 0 3 chr2 44335611 44335923 -208920660 - AluSq SINE Alu -2 311 1 931 167 0 7 chr2 44336259 44336409 -208920174 - AluJo/FRAM SINE Alu -30 282 134 2079 112 3 0 chr2 44336409 44336704 -208919879 - AluSx SINE Alu -15 297 2 213 39 0 0 chr2 44336706 44336732 -208919851 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 1982 68 60 0 chr2 44336732 44336878 -208919705 - AluY SINE Alu -30 281 145 275 0 29 0 chr2 44336878 44336913 -208919670 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1982 68 60 0 chr2 44336913 44337031 -208919552 - AluY SINE Alu -166 145 1 2081 96 31 0 chr2 44337031 44337321 -208919262 - AluSp SINE Alu -13 300 1 1667 109 51 12 chr2 44337365 44337621 -208918962 - AluSq SINE Alu -47 266 1 659 168 26 0 chr2 44337621 44337734 -208918849 - AluJo SINE Alu -176 136 21 197 260 8 110 chr2 44337947 44338074 -208918509 + L2 LINE L2 2791 2904 -410 590 215 103 51 chr2 44338103 44338317 -208918266 + L2 LINE L2 3089 3313 0 250 281 34 11 chr2 44338379 44338468 -208918115 - L2 LINE L2 0 3313 3223 634 327 27 64 chr2 44338960 44339290 -208917293 - L2 LINE L2 -4 3268 2951 1167 203 6 84 chr2 44339381 44339514 -208917069 + AluJo SINE Alu 4 146 -156 2039 118 20 0 chr2 44339514 44339819 -208916764 + AluSx SINE Alu 1 311 -1 1167 203 6 84 chr2 44339819 44340001 -208916582 + AluJo SINE Alu 142 295 -3 261 0 0 0 chr2 44340001 44340030 -208916553 + (TA)n Simple_repeat Simple_repeat 1 29 0 280 250 102 23 chr2 44340052 44340140 -208916443 - MER5C DNA MER1_type -225 99 5 2212 98 0 0 chr2 44340379 44340674 -208915909 - AluSg SINE Alu -15 295 1 210 192 0 0 chr2 44342273 44342325 -208914258 + (TATATG)n Simple_repeat Simple_repeat 5 56 0 851 193 6 0 chr2 44342325 44342486 -208914097 - AluJo SINE Alu -14 298 137 742 146 15 31 chr2 44342615 44342745 -208913838 - AluJo SINE Alu -174 128 1 1400 162 0 126 chr2 44342842 44343176 -208913407 - AluJb SINE Alu -10 292 1 288 154 0 0 chr2 44343179 44343231 -208913352 - L1PA11 LINE L1 -6 6168 6117 305 57 0 38 chr2 44343231 44343284 -208913299 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1864 116 0 0 chr2 44343284 44343543 -208913040 - AluSg SINE Alu -29 281 23 1702 115 29 0 chr2 44343543 44343784 -208912799 - AluSx SINE Alu -62 250 1 407 167 167 0 chr2 44344167 44344245 -208912338 - AluJ/FLAM SINE Alu -219 93 3 1622 167 0 41 chr2 44344256 44344574 -208912009 - AluJo SINE Alu -3 309 5 1956 104 59 0 chr2 44344655 44344944 -208911639 - AluSp SINE Alu -6 307 2 2333 60 0 3 chr2 44344955 44345253 -208911330 - AluY SINE Alu -14 297 1 668 178 0 39 chr2 44345402 44345531 -208911052 + FLAM_C SINE Alu 2 125 -18 273 259 104 44 chr2 44345807 44345942 -208910641 + MIR SINE MIR 25 167 -95 1842 139 17 7 chr2 44346436 44346730 -208909853 - AluSx SINE Alu -15 297 1 2009 108 7 7 chr2 44346741 44347037 -208909546 - AluSp SINE Alu -13 300 5 396 268 93 29 chr2 44347065 44347270 -208909313 - L1MC5 LINE L1 -36 7925 7708 551 185 57 38 chr2 44347279 44347436 -208909147 - L1MC4 LINE L1 -17 8025 7866 247 103 0 0 chr2 44347445 44347484 -208909099 - Alu SINE Alu -7 295 257 1368 162 0 66 chr2 44347509 44347780 -208908803 + AluJb SINE Alu 30 282 -30 1078 101 0 0 chr2 44347835 44347973 -208908610 - AluSg/x SINE Alu -16 296 159 2323 66 11 3 chr2 44347999 44348286 -208908297 - AluSp SINE Alu -24 289 1 2071 121 10 0 chr2 44348367 44348656 -208907927 - AluSx SINE Alu -4 308 17 602 225 0 29 chr2 44348714 44348852 -208907731 + FRAM SINE Alu 26 159 -17 1932 152 34 0 chr2 44348899 44349196 -208907387 + AluSq SINE Alu 1 307 -6 763 150 8 0 chr2 44349200 44349320 -208907263 + FLAM_C SINE Alu 1 121 -12 703 108 7 7 chr2 44349373 44349512 -208907071 + (CA)n Simple_repeat Simple_repeat 2 140 0 1643 150 55 46 chr2 44349517 44349638 -208906945 + AluSx SINE Alu 1 119 -193 2401 92 0 0 chr2 44349638 44349931 -208906652 + AluSc SINE Alu 1 293 -16 1643 150 55 46 chr2 44349931 44350116 -208906467 + AluSx SINE Alu 119 310 -2 524 138 92 0 chr2 44350126 44350213 -208906370 + AluJb SINE Alu 194 288 -24 1646 164 7 21 chr2 44350492 44350779 -208905804 - AluSx SINE Alu -11 301 19 1241 199 78 152 chr2 44350790 44351586 -208904997 - Charlie2a DNA MER1_type -348 2514 1778 247 219 12 12 chr2 44351641 44351723 -208904860 + (TA)n Simple_repeat Simple_repeat 1 82 0 1249 183 155 34 chr2 44351730 44352053 -208904530 - MLT2C1 LTR ERVL -33 364 3 283 149 30 45 chr2 44352055 44352122 -208904461 - Charlie2a DNA MER1_type -1087 1775 1710 21 0 0 0 chr2 44352213 44352234 -208904349 + AT_rich Low_complexity Low_complexity 1 21 0 728 212 25 30 chr2 44352237 44352435 -208904148 - Charlie2a DNA MER1_type -1206 1656 1460 1452 134 5 0 chr2 44352453 44352662 -208903921 - AluSg/x SINE Alu -17 295 86 613 210 164 96 chr2 44352662 44353015 -208903568 - Charlie2a DNA MER1_type -2377 405 29 2246 149 53 19 chr2 44353065 44353481 -208903102 + MSTB1 LTR MaLR 1 430 -2 1794 124 0 16 chr2 44353509 44353767 -208902816 - AluSx SINE Alu -9 303 50 3736 128 42 6 chr2 44353908 44354535 -208902048 - Tigger3(Golem) DNA MER2_type -1 3028 2380 2221 111 10 0 chr2 44354535 44354841 -208901742 - AluSg SINE Alu -1 309 1 246 274 32 21 chr2 44354980 44355075 -208901508 + L1M4 LINE L1 4822 4917 -1229 1334 234 97 35 chr2 44355090 44355521 -208901062 + LTR32 LTR ERVL 14 471 0 301 204 111 76 chr2 44355555 44355696 -208900887 - L1MC5 LINE L1 -465 7496 7346 1889 89 32 76 chr2 44355696 44356011 -208900572 - AluSx SINE Alu -11 301 1 301 204 111 76 chr2 44356011 44356041 -208900542 - L1MC5 LINE L1 -615 7346 7319 2133 102 9 35 chr2 44356243 44356624 -208899959 - AluSq SINE Alu 0 373 1 353 183 98 0 chr2 44356658 44356740 -208899843 - MER20B DNA MER1_type 0 783 694 510 296 41 27 chr2 44356752 44356972 -208899611 - HAL1 LINE L1 -889 1618 1396 2459 83 0 10 chr2 44357514 44357827 -208898756 - AluSg SINE Alu 0 310 1 213 108 0 0 chr2 44357861 44357898 -208898685 + (CA)n Simple_repeat Simple_repeat 2 38 0 1283 205 4 15 chr2 44358111 44358374 -208898209 + AluJo SINE Alu 37 296 -16 186 43 0 0 chr2 44358380 44358403 -208898180 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 417 222 100 0 chr2 44358404 44358494 -208898089 - FLAM_A SINE Alu -26 116 18 1808 154 0 4 chr2 44358781 44359048 -208897535 - AluJo SINE Alu -34 278 13 1938 136 10 14 chr2 44359124 44359439 -208897144 + AluSx SINE Alu 1 312 0 1472 101 58 19 chr2 44359753 44360011 -208896572 - SVA Other Other -1116 270 3 1465 150 135 0 chr2 44360271 44360537 -208896046 - AluJo SINE Alu -10 302 1 1943 103 0 0 chr2 44360608 44360851 -208895732 + AluSx SINE Alu 47 289 -23 1944 151 3 3 chr2 44361494 44361786 -208894797 + AluSx SINE Alu 1 292 -20 230 182 0 0 chr2 44361795 44361850 -208894733 - L1MA4A LINE L1 -4 6299 6245 2083 131 3 3 chr2 44361925 44362223 -208894360 - AluSx SINE Alu -13 299 2 380 205 0 0 chr2 44362614 44362692 -208893891 - MER103 DNA DNA -51 115 38 2081 129 7 10 chr2 44362709 44363012 -208893571 + AluSx SINE Alu 1 302 -10 245 232 58 29 chr2 44363319 44363388 -208893195 + LTR8A LTR ERV1 593 663 -64 3606 35 0 23 chr2 44363567 44363996 -208892587 + SVA Other Other 968 1386 0 2312 96 0 3 chr2 44364231 44364523 -208892060 + AluSq SINE Alu 2 292 -21 2073 103 30 0 chr2 44364524 44364825 -208891758 + AluY SINE Alu 1 310 -1 22 35 0 0 chr2 44365445 44365474 -208891109 + AT_rich Low_complexity Low_complexity 1 29 0 308 263 12 12 chr2 44365863 44365943 -208890640 - MER81 DNA DNA -34 80 1 1147 205 56 46 chr2 44365981 44366284 -208890299 + L1ME LINE L1 5458 5763 -401 1570 158 0 82 chr2 44366294 44366438 -208890145 + AluSx SINE Alu 1 107 -205 1948 132 0 4 chr2 44366438 44366710 -208889873 + AluSx SINE Alu 9 279 -33 1570 158 0 82 chr2 44366710 44366881 -208889702 + AluSx SINE Alu 107 290 -22 634 234 0 0 chr2 44366887 44367011 -208889572 + FLAM_A SINE Alu 4 127 -6 934 251 19 19 chr2 44367103 44367366 -208889217 + L1MEc LINE L1 501 763 -5633 969 158 23 11 chr2 44367367 44367544 -208889039 + AluSc SINE Alu 1 179 -130 272 277 82 50 chr2 44368701 44368860 -208887723 + MIR SINE MIR 15 178 -84 2100 112 3 20 chr2 44368871 44369167 -208887416 - AluSq SINE Alu -22 291 1 2197 104 30 0 chr2 44369249 44369548 -208887035 - AluY SINE Alu -3 308 1 188 268 14 14 chr2 44369638 44369709 -208886874 - MIR3 SINE MIR -9 199 129 2100 75 27 30 chr2 44370492 44370787 -208885796 + AluY SINE Alu 3 296 -15 2345 97 0 7 chr2 44371097 44371406 -208885177 + AluY SINE Alu 1 307 -4 938 159 0 12 chr2 44371622 44371785 -208884798 + AluJb SINE Alu 129 289 -23 1779 132 15 7 chr2 44371789 44372062 -208884521 - Tigger3b DNA MER2_type -661 570 296 2153 112 0 7 chr2 44372062 44372358 -208884225 + AluSx SINE Alu 1 294 -18 778 230 17 17 chr2 44372379 44372557 -208884026 + AluJb SINE Alu 118 295 -17 1469 189 39 4 chr2 44372557 44372837 -208883746 - Tigger3b DNA MER2_type -940 291 2 443 153 0 47 chr2 44372934 44373019 -208883564 + FAM SINE Alu 89 169 -16 324 277 62 18 chr2 44373020 44373132 -208883451 - L1MC/D LINE L1 -2195 5613 5497 2049 120 41 0 chr2 44373145 44373436 -208883147 - AluSx SINE Alu -9 303 1 2080 119 38 3 chr2 44373438 44373731 -208882852 - AluSx SINE Alu -9 303 1 2233 97 0 13 chr2 44373785 44374084 -208882499 - AluSg SINE Alu -15 295 1 2061 137 0 16 chr2 44374223 44374529 -208882054 - AluSx SINE Alu -11 301 1 1517 164 31 17 chr2 44374554 44374847 -208881736 - AluJo SINE Alu -1 311 15 2028 123 7 7 chr2 44375401 44375702 -208880881 - AluSx SINE Alu -11 301 1 2092 109 24 3 chr2 44376300 44376593 -208879990 + AluSq SINE Alu 1 299 -14 475 153 0 12 chr2 44376619 44376704 -208879879 - L1MC4 LINE L1 -37 8005 7922 1062 135 107 10 chr2 44376709 44377058 -208879525 - LTR54 LTR ERV1 0 510 8 180 0 0 0 chr2 44377062 44377082 -208879501 + (TA)n Simple_repeat Simple_repeat 1 20 0 1560 220 8 38 chr2 44377083 44377478 -208879105 - L1MC4 LINE L1 -147 7895 7513 399 263 161 41 chr2 44377516 44378025 -208878558 - L1M4 LINE L1 -2702 3444 2875 665 168 0 77 chr2 44378532 44378675 -208877908 + FLAM_A SINE Alu 1 132 -1 2205 121 6 10 chr2 44378677 44378990 -208877593 + AluSx SINE Alu 1 312 0 999 171 17 11 chr2 44379162 44379343 -208877240 - AluSg/x SINE Alu -12 298 117 1074 173 0 25 chr2 44379692 44379894 -208876689 + AluJb SINE Alu 100 296 -16 2427 92 0 0 chr2 44379899 44380203 -208876380 + AluSg SINE Alu 5 308 -2 750 171 0 0 chr2 44380215 44380338 -208876245 + AluJb SINE Alu 2 124 -188 26 0 0 0 chr2 44380338 44380364 -208876219 + AT_rich Low_complexity Low_complexity 1 26 0 1908 133 3 27 chr2 44380367 44380667 -208875916 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr2 44381816 44381839 -208874744 + AT_rich Low_complexity Low_complexity 1 23 0 229 196 78 0 chr2 44382099 44382150 -208874433 + L1P LINE L1 5319 5373 -795 2312 97 3 3 chr2 44382170 44382480 -208874103 + AluY SINE Alu 2 311 0 2033 131 3 0 chr2 44382541 44382832 -208873751 + AluSx SINE Alu 8 299 -13 24 0 0 0 chr2 44382859 44382883 -208873700 + AT_rich Low_complexity Low_complexity 1 24 0 1994 120 10 19 chr2 44383125 44383433 -208873150 - AluSc SINE Alu -4 305 1 2456 80 0 3 chr2 44383488 44383800 -208872783 - AluY SINE Alu 0 311 1 2155 102 3 20 chr2 44383840 44384145 -208872438 - AluSx SINE Alu -12 300 1 2005 151 0 19 chr2 44384347 44384665 -208871918 - AluJb SINE Alu 0 312 1 316 318 0 0 chr2 44385034 44385144 -208871439 + L1ME LINE L1 5606 5715 -406 1703 113 140 0 chr2 44385310 44385575 -208871008 + AluSq SINE Alu 1 302 -11 28 0 0 0 chr2 44385713 44385741 -208870842 + AT_rich Low_complexity Low_complexity 1 28 0 1284 191 70 33 chr2 44385741 44386013 -208870570 - AluJo SINE Alu -30 282 1 1719 182 0 10 chr2 44386387 44386689 -208869894 - AluJo SINE Alu -13 299 1 345 235 152 29 chr2 44387249 44387453 -208869130 + L1M4 LINE L1 4419 4647 -1499 806 231 156 35 chr2 44387520 44387776 -208868807 + Charlie1a DNA MER1_type 40 326 -1129 546 186 62 0 chr2 44387777 44387890 -208868693 - L1MB5 LINE L1 -2 6172 6053 2169 120 10 3 chr2 44387898 44388198 -208868385 - AluSx SINE Alu -10 302 1 822 190 40 30 chr2 44388220 44388272 -208868311 + Charlie1a DNA MER1_type 358 408 -2353 1643 210 0 3 chr2 44388272 44388572 -208868011 - AluJo SINE Alu -13 299 1 822 190 40 30 chr2 44388572 44388719 -208867864 + Charlie1a DNA MER1_type 408 559 -896 690 199 105 66 chr2 44388743 44388767 -208867816 + Charlie1a DNA MER1_type 1133 1155 -1606 571 94 24 0 chr2 44388767 44388852 -208867731 + L1MA9 LINE L1 6219 6305 -7 690 199 105 66 chr2 44388852 44388911 -208867672 + Charlie1a DNA MER1_type 1155 1210 -1551 10425 48 58 5 chr2 44388911 44390217 -208866366 - SVA Other Other -2 1384 10 690 199 105 66 chr2 44390217 44390418 -208866165 + Charlie1a DNA MER1_type 1210 1429 -26 762 202 0 0 chr2 44390438 44390567 -208866016 - FLAM_C SINE Alu -4 129 1 262 269 56 62 chr2 44390618 44390778 -208865805 + L1M4 LINE L1 4685 4843 -1303 372 198 0 12 chr2 44390966 44391052 -208865531 - MIR SINE MIR 0 262 178 325 244 24 0 chr2 44391466 44391548 -208865035 - MIR SINE MIR -98 164 81 631 179 72 5 chr2 44391577 44391729 -208864854 + L1MB3 LINE L1 5652 5815 -368 836 152 7 41 chr2 44391729 44391874 -208864709 + FRAM SINE Alu 1 138 -38 393 22 0 0 chr2 44391877 44391923 -208864660 + (TC)n Simple_repeat Simple_repeat 2 47 0 351 0 0 0 chr2 44391925 44391964 -208864619 + (CA)n Simple_repeat Simple_repeat 2 40 0 1313 150 113 30 chr2 44391970 44392270 -208864313 + L1MB3 LINE L1 5816 6140 -43 23 0 0 0 chr2 44392279 44392302 -208864281 + AT_rich Low_complexity Low_complexity 1 23 0 645 216 0 24 chr2 44392324 44392449 -208864134 + FLAM_A SINE Alu 1 122 -11 405 234 9 37 chr2 44392692 44392799 -208863784 - L2 LINE L2 0 3272 3169 2446 80 0 0 chr2 44393236 44393538 -208863045 - AluY SINE Alu -9 302 1 187 351 79 35 chr2 44393637 44393751 -208862832 + MIR SINE MIR 23 141 -67 2127 115 24 0 chr2 44394121 44394416 -208862167 - AluSg SINE Alu -8 302 1 1181 82 22 43 chr2 44394883 44395067 -208861516 + AluSq SINE Alu 132 311 -2 1323 210 95 0 chr2 44395774 44395918 -208860665 - AluJo SINE Alu -25 287 158 180 0 0 0 chr2 44395918 44395938 -208860645 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 1323 210 95 0 chr2 44395938 44396055 -208860528 - AluJo SINE Alu -154 158 1 2413 77 3 3 chr2 44396504 44396801 -208859782 + AluSg SINE Alu 1 297 -13 428 265 77 33 chr2 44396903 44397175 -208859408 + L1ME LINE L1 4767 5050 -1096 28 0 0 0 chr2 44397186 44397214 -208859369 + AT_rich Low_complexity Low_complexity 1 28 0 252 317 41 78 chr2 44397216 44397459 -208859124 + L1ME LINE L1 5638 5871 -299 1657 137 3 32 chr2 44397999 44398283 -208858300 - AluJb SINE Alu -2 310 35 650 160 0 56 chr2 44398549 44398674 -208857909 + FLAM_C SINE Alu 1 118 -25 205 240 92 0 chr2 44398840 44398914 -208857669 + MIR SINE MIR 93 172 -63 2086 103 10 7 chr2 44399147 44399438 -208857145 + AluSg SINE Alu 1 292 -18 637 177 31 8 chr2 44399791 44399921 -208856662 - AluSq/x SINE Alu -180 133 1 2001 122 7 0 chr2 44399937 44400223 -208856360 - AluSg SINE Alu -21 289 2 2048 125 0 14 chr2 44400249 44400577 -208856006 - AluSq SINE Alu 0 324 1 2101 115 0 3 chr2 44401136 44401422 -208855161 - AluSg SINE Alu -24 286 2 22 0 0 0 chr2 44401482 44401504 -208855079 + AT_rich Low_complexity Low_complexity 1 22 0 2223 196 115 35 chr2 44401509 44401830 -208854753 - LTR26E LTR ERV1 0 622 328 1939 125 21 10 chr2 44401830 44402119 -208854464 - AluSx SINE Alu -19 293 2 2223 196 115 35 chr2 44402119 44402373 -208854210 - LTR26E LTR ERV1 -294 328 1 457 226 149 6 chr2 44402603 44402771 -208853812 - L1MC4a LINE L1 -1944 5864 5673 1313 133 9 120 chr2 44403558 44403735 -208852848 - L1MA2 LINE L1 0 6304 6109 1899 160 0 0 chr2 44403735 44404035 -208852548 - AluSq SINE Alu -13 300 1 1313 133 9 120 chr2 44404035 44404137 -208852446 - L1MA2 LINE L1 -195 6109 6061 2280 74 7 7 chr2 44404137 44404435 -208852148 - AluY SINE Alu -13 298 1 1313 133 9 120 chr2 44404435 44404470 -208852113 - L1MA2 LINE L1 -243 6061 6024 2095 111 0 52 chr2 44405027 44405334 -208851249 + AluSc SINE Alu 1 291 -18 1847 157 18 0 chr2 44405346 44405632 -208850951 + AluJb SINE Alu 1 291 -21 2454 31 17 10 chr2 44405654 44405947 -208850636 + AluY SINE Alu 1 295 -16 1023 172 37 19 chr2 44406031 44406246 -208850337 + MER20 DNA MER1_type 1 219 0 1817 133 95 17 chr2 44406342 44406688 -208849895 - THE1C LTR MaLR -2 373 1 26 30 0 0 chr2 44406697 44406730 -208849853 + AT_rich Low_complexity Low_complexity 1 33 0 225 205 0 36 chr2 44406983 44407066 -208849517 - HAL1 LINE L1 -417 2090 2011 351 258 144 0 chr2 44407086 44407218 -208849365 - HAL1 LINE L1 -855 1652 1502 2086 135 0 7 chr2 44407390 44407687 -208848896 + AluSx SINE Alu 1 295 -17 1862 151 7 13 chr2 44407809 44408113 -208848470 - AluSx SINE Alu -10 302 1 283 248 21 99 chr2 44408116 44408257 -208848326 - MER5A DNA MER1_type -1 188 59 1761 156 7 11 chr2 44408303 44408610 -208847973 + AluJo SINE Alu 1 306 0 2314 95 3 0 chr2 44408663 44408969 -208847614 - AluSg SINE Alu -3 307 1 460 128 163 0 chr2 44410005 44410091 -208846492 + HY3 scRNA scRNA 1 100 -1 1316 137 122 38 chr2 44410434 44410697 -208845886 - AluJo SINE Alu -13 299 15 22 0 0 0 chr2 44410934 44410956 -208845627 + AT_rich Low_complexity Low_complexity 1 22 0 1291 117 0 0 chr2 44411096 44411275 -208845308 - AluSg/x SINE Alu -3 309 131 1917 156 0 0 chr2 44412963 44413251 -208843332 - AluSx SINE Alu -24 288 1 180 0 0 0 chr2 44413253 44413273 -208843310 + (T)n Simple_repeat Simple_repeat 1 20 0 2024 105 0 67 chr2 44413610 44413923 -208842660 + AluSg SINE Alu 1 292 -18 905 138 0 20 chr2 44413931 44414083 -208842500 + L1PB4 LINE L1 6006 6154 -2 892 129 0 15 chr2 44414426 44414558 -208842025 + FLAM_C SINE Alu 9 138 -5 2283 104 3 0 chr2 44414689 44414988 -208841595 - AluSq SINE Alu -13 300 1 230 229 43 0 chr2 44415523 44415593 -208840990 + (TATG)n Simple_repeat Simple_repeat 1 73 0 26 0 0 0 chr2 44416425 44416451 -208840132 + AT_rich Low_complexity Low_complexity 1 26 0 608 152 9 9 chr2 44416451 44416556 -208840027 - FLAM_C SINE Alu -25 118 14 10779 118 34 58 chr2 44416591 44417172 -208839411 + Tigger1 DNA MER2_type 9 602 -1816 463 86 0 29 chr2 44417172 44417242 -208839341 + Alu SINE Alu 238 305 -7 10779 118 34 58 chr2 44417242 44417286 -208839297 + Tigger1 DNA MER2_type 602 646 -1772 1896 156 7 0 chr2 44417286 44417603 -208838980 + AluSx SINE Alu 1 319 0 10779 118 34 58 chr2 44417603 44418916 -208837667 + Tigger1 DNA MER2_type 646 1970 -448 2405 60 7 3 chr2 44418916 44419218 -208837365 + AluY SINE Alu 1 303 -8 10779 118 34 58 chr2 44419218 44419269 -208837314 + Tigger1 DNA MER2_type 1970 2021 -397 1785 136 18 14 chr2 44419272 44419552 -208837031 - AluSx SINE Alu -21 291 11 2206 108 0 7 chr2 44419880 44420176 -208836407 - AluSq SINE Alu -19 294 1 495 342 31 0 chr2 44420901 44421094 -208835489 + MIR SINE MIR 29 227 -35 2070 96 3 58 chr2 44421148 44421460 -208835123 + AluSx SINE Alu 1 295 -17 286 206 32 71 chr2 44422203 44422329 -208834254 + MER20 DNA MER1_type 7 127 -92 2202 82 38 3 chr2 44422467 44422759 -208833824 - AluY SINE Alu -5 306 5 3035 114 88 7 chr2 44422926 44423463 -208833120 - Tigger3(Golem) DNA MER2_type -2 3027 2448 1860 133 7 33 chr2 44423543 44423844 -208832739 + AluJb SINE Alu 2 294 -18 1961 95 60 11 chr2 44423846 44424131 -208832452 + AluSq SINE Alu 1 299 -14 740 176 52 150 chr2 44424149 44424530 -208832053 - LTR49 LTR ERV1 -245 350 7 706 168 0 8 chr2 44424560 44424679 -208831904 - FLAM_C SINE Alu -15 118 1 329 253 11 21 chr2 44424821 44424916 -208831667 - L1M4 LINE L1 -1981 4165 4072 22 0 0 0 chr2 44425946 44425968 -208830615 + AT_rich Low_complexity Low_complexity 1 22 0 190 293 20 101 chr2 44426395 44426494 -208830089 - L2 LINE L2 -33 3280 3190 1518 210 4 11 chr2 44426671 44426947 -208829636 - AluJb SINE Alu -38 274 1 2164 141 0 0 chr2 44427635 44427934 -208828649 - AluSx SINE Alu -13 299 1 361 292 76 21 chr2 44428846 44428990 -208827593 + L1ME2 LINE L1 5725 5876 -288 26 0 0 0 chr2 44429138 44429164 -208827419 + AT_rich Low_complexity Low_complexity 1 26 0 874 165 0 0 chr2 44429677 44429810 -208826773 + FLAM_C SINE Alu 1 133 0 2262 104 3 19 chr2 44429816 44430132 -208826451 + AluSx SINE Alu 1 311 -1 1679 265 136 8 chr2 44430140 44430801 -208825782 + L1ME3A LINE L1 5417 6162 -8 1836 147 0 71 chr2 44430832 44431158 -208825425 + AluJo SINE Alu 8 310 -2 2205 123 7 0 chr2 44432110 44432420 -208824163 - AluSx SINE Alu 0 312 1 1832 189 0 6 chr2 44432424 44432736 -208823847 - AluJo SINE Alu -2 310 1 287 149 14 68 chr2 44432822 44432896 -208823687 - LTR50 LTR ERVL -720 75 6 2157 115 3 0 chr2 44433032 44433328 -208823255 + AluSp SINE Alu 1 297 -16 280 149 21 0 chr2 44433703 44433750 -208822833 - Alu SINE Alu -254 48 1 394 143 0 0 chr2 44434013 44434076 -208822507 + Tigger5 DNA MER2_type 2237 2299 -24 851 309 129 5 chr2 44434152 44434524 -208822059 - LTR16A LTR ERVL -2 448 31 259 213 120 13 chr2 44434542 44434617 -208821966 - MLT1I LTR MaLR -46 363 281 * 272 263 163 19 chr2 44434589 44434893 -208821690 - MLT1H LTR MaLR -161 388 4 2362 93 0 10 chr2 44435177 44435489 -208821094 - AluSc SINE Alu 0 309 1 47 0 0 0 chr2 44435543 44435590 -208820993 + AT_rich Low_complexity Low_complexity 1 47 0 302 171 98 12 chr2 44435594 44435676 -208820907 - AluSg SINE Alu -211 89 1 2066 139 3 3 chr2 44435713 44436023 -208820560 - AluSg SINE Alu 0 310 1 476 237 114 41 chr2 44436041 44436260 -208820323 - L1ME3 LINE L1 -1 6161 5927 1972 164 0 0 chr2 44437072 44437370 -208819213 + AluJb SINE Alu 1 298 -14 1292 169 58 73 chr2 44437555 44437765 -208818818 - MER44D DNA MER2_type -1882 609 397 2307 77 27 61 chr2 44437765 44437921 -208818662 + THE1B LTR MaLR 3 163 -201 2107 124 3 7 chr2 44437921 44438227 -208818356 - AluSx SINE Alu -2 310 6 2307 77 27 61 chr2 44438227 44438445 -208818138 + THE1B LTR MaLR 163 364 0 1292 169 58 73 chr2 44438445 44438577 -208818006 - MER44D DNA MER2_type -2094 397 2 2117 117 37 0 chr2 44438918 44439217 -208817366 - AluSx SINE Alu -2 310 1 434 243 37 44 chr2 44439535 44439671 -208816912 - MIR SINE MIR -56 206 72 1425 178 53 18 chr2 44441347 44441628 -208814955 - AluJb SINE Alu -21 291 1 1765 159 10 10 chr2 44442092 44442388 -208814195 - AluJb SINE Alu -5 307 12 527 174 0 0 chr2 44442409 44442501 -208814082 + FRAM SINE Alu 77 168 -8 28 0 0 0 chr2 44442503 44442531 -208814052 + AT_rich Low_complexity Low_complexity 1 28 0 1401 157 81 4 chr2 44442538 44442774 -208813809 + AluJo SINE Alu 26 279 -33 24 91 0 0 chr2 44442833 44442899 -208813684 + AT_rich Low_complexity Low_complexity 1 66 0 1997 135 3 3 chr2 44443379 44443682 -208812901 + AluSg SINE Alu 1 303 -7 3291 124 56 2 chr2 44443989 44444488 -208812095 - MER1A DNA MER1_type -1 526 1 25 0 0 0 chr2 44444499 44444524 -208812059 + AT_rich Low_complexity Low_complexity 1 25 0 745 122 65 14 chr2 44444524 44444663 -208811920 - L1MA9 LINE L1 0 6312 6167 201 296 92 71 chr2 44445364 44445462 -208811121 - L2 LINE L2 -19 3253 3154 1864 210 30 74 chr2 44446898 44446992 -208809591 - L1ME1 LINE L1 -18 6148 6051 885 136 8 0 chr2 44446992 44447124 -208809459 + FLAM_C SINE Alu 1 133 0 2132 120 0 7 chr2 44447132 44447423 -208809160 + AluSx SINE Alu 3 291 -21 1973 144 0 26 chr2 44447424 44447729 -208808854 + AluSx SINE Alu 1 297 -15 1864 210 30 74 chr2 44447729 44448219 -208808364 - L1ME1 LINE L1 -121 6045 5579 857 245 22 24 chr2 44448221 44448611 -208807972 + MLT2F LTR ERVL 3 436 -227 273 171 0 0 chr2 44448612 44448667 -208807916 + L1MC/D LINE L1 5525 5582 -587 232 162 0 0 chr2 44448669 44448706 -208807877 - MLT2F LTR ERVL -2 661 625 1374 172 0 51 chr2 44448714 44448970 -208807613 - AluJo SINE Alu -68 244 2 670 219 61 15 chr2 44448973 44449245 -208807338 - L1M1 LINE L1 -743 5403 5204 * 1883 208 37 49 chr2 44449243 44449859 -208806724 - L1M4 LINE L1 -1827 4555 3947 1432 224 79 83 chr2 44449919 44450588 -208805995 - L1M4 LINE L1 -2414 3968 3301 738 198 5 86 chr2 44450588 44450775 -208805808 + FAM SINE Alu 3 174 -1 1432 224 79 83 chr2 44450775 44450828 -208805755 - L1M4 LINE L1 -3081 3301 3249 309 333 20 25 chr2 44450983 44451184 -208805399 - L1M4 LINE L1 -4883 1501 1302 426 124 0 174 chr2 44451202 44451268 -208805315 - L1MA2 LINE L1 0 6304 6267 1999 92 13 70 chr2 44451268 44451429 -208805154 - AluSc SINE Alu -13 296 160 2002 129 0 0 chr2 44451429 44451745 -208804838 - AluSx SINE Alu 0 312 20 1999 92 13 70 chr2 44451745 44451897 -208804686 - AluSc SINE Alu -149 160 1 426 124 0 174 chr2 44451897 44451951 -208804632 - L1MA2 LINE L1 -37 6267 6205 3469 125 32 4 chr2 44451989 44452944 -208803639 - L1M1 LINE L1 -4287 3278 2247 200 35 35 0 chr2 44503136 44503165 -208753418 + (CA)n Simple_repeat Simple_repeat 1 30 0 939 143 0 0 chr2 44503435 44503568 -208753015 - FLAM_C SINE Alu 0 133 1 1121 103 0 0 chr2 44504051 44504241 -208752342 - AluY SINE Alu 0 326 137 893 96 44 0 chr2 44504342 44504477 -208752106 + MER4-int LTR ERV1 1959 2099 -4499 866 116 78 0 chr2 44504478 44504607 -208751976 - LTR8 LTR ERV1 -552 139 1 2849 117 80 16 chr2 44504607 44505155 -208751428 + MER4-int LTR ERV1 2737 3319 -3279 2148 75 32 75 chr2 44505160 44505329 -208751254 + MER4-int LTR ERV1 3919 4094 -2504 2036 134 3 7 chr2 44505329 44505621 -208750962 - AluSg SINE Alu -19 291 1 2148 75 32 75 chr2 44505621 44505823 -208750760 + MER4-int LTR ERV1 4094 4274 -2324 183 114 0 0 chr2 44505839 44505874 -208750709 + (A)n Simple_repeat Simple_repeat 1 35 0 30 45 0 0 chr2 44505927 44505971 -208750612 + AT_rich Low_complexity Low_complexity 1 44 0 244 324 42 133 chr2 44506305 44506506 -208750077 - L2 LINE L2 -13 3259 3104 1933 176 0 3 chr2 44506506 44506819 -208749764 - AluJb SINE Alu 0 312 1 244 324 42 133 chr2 44506819 44506978 -208749605 - L2 LINE L2 -168 3104 2932 486 0 0 0 chr2 44509468 44509522 -208747061 + (CA)n Simple_repeat Simple_repeat 2 55 0 1731 145 23 0 chr2 44509558 44509820 -208746763 + AluJo SINE Alu 1 268 -44 189 0 0 0 chr2 44509827 44509848 -208746735 + (CA)n Simple_repeat Simple_repeat 1 21 0 189 237 17 17 chr2 44510277 44510336 -208746247 - MIR SINE MIR -31 231 173 * 451 289 44 0 chr2 44510332 44510446 -208746137 + L2 LINE L2 3153 3271 -1 307 339 16 16 chr2 44510452 44510573 -208746010 - MIR SINE MIR -131 131 11 391 191 123 0 chr2 44510729 44510897 -208745686 - LTR50 LTR ERVL -169 626 358 366 232 106 0 chr2 44510935 44511086 -208745497 - LTR50 LTR ERVL -589 206 40 2345 45 0 0 chr2 44511548 44511815 -208744768 - L1PA3 LINE L1 -3 6152 5886 1429 209 3 21 chr2 44512105 44512388 -208744195 + AluJo SINE Alu 5 282 -30 207 0 0 0 chr2 44512392 44512415 -208744168 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 213 394 32 19 chr2 44512819 44512974 -208743609 + MIR SINE MIR 32 188 -74 10667 157 41 30 chr2 44512999 44514278 -208742305 - L1MA3 LINE L1 0 7724 6461 2356 76 10 25 chr2 44514278 44514592 -208741991 - AluY SINE Alu -2 309 1 10667 157 41 30 chr2 44514592 44516561 -208740022 - L1MA3 LINE L1 -1263 6461 4438 2797 78 29 0 chr2 44516562 44516907 -208739676 - THE1A LTR MaLR 0 355 1 10636 90 81 0 chr2 44516907 44518369 -208738214 - THE1A-int LTR MaLR 0 1580 1 2886 77 11 0 chr2 44518369 44518720 -208737863 - THE1A LTR MaLR 0 355 1 806 181 7 0 chr2 44518720 44518875 -208737708 - L1MA3 LINE L1 -3124 4441 4286 824 149 8 8 chr2 44518898 44519032 -208737551 - AluJo SINE Alu -178 134 1 16077 145 33 25 chr2 44519032 44522875 -208733708 - L1MA3 LINE L1 -3266 4299 12 464 303 26 19 chr2 44522875 44523030 -208733553 - MIR SINE MIR -57 205 50 15325 113 18 57 chr2 44523095 44523212 -208733371 - Tigger1 DNA MER2_type 0 2418 2298 1578 183 8 0 chr2 44523212 44523480 -208733103 + AluJb SINE Alu 1 270 -42 9542 43 6 0 chr2 44523480 44524545 -208732038 + MER11C LTR ERVK 1 1071 0 15325 113 18 57 chr2 44524545 44525461 -208731122 - Tigger1 DNA MER2_type -119 2299 1348 1782 152 25 4 chr2 44525461 44525737 -208730846 + AluJo SINE Alu 1 282 -30 225 65 0 0 chr2 44525738 44525769 -208730814 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 15325 113 18 57 chr2 44525769 44527249 -208729334 - Tigger1 DNA MER2_type -1069 1349 1 2050 145 0 0 chr2 44527359 44527662 -208728921 - AluSx SINE Alu 0 312 10 187 339 36 0 chr2 44527879 44527935 -208728648 + L2 LINE L2 3199 3256 -16 534 174 17 35 chr2 44530646 44530761 -208725822 - HAL1 LINE L1 -1274 1233 1121 758 174 0 61 chr2 44530786 44530918 -208725665 - FLAM_C SINE Alu -19 124 1 593 233 93 5 chr2 44530947 44531057 -208725526 - L1M4 LINE L1 -3621 3944 3845 2207 108 0 0 chr2 44531057 44531344 -208725239 - AluSc SINE Alu -22 287 1 593 233 93 5 chr2 44531344 44531426 -208725157 - L1M4 LINE L1 -3720 3845 3735 2912 150 56 71 chr2 44531561 44532234 -208724349 - MER21B LTR ERV1 -1 862 372 2212 107 7 0 chr2 44532234 44532532 -208724051 - AluSx SINE Alu -12 300 1 2912 150 56 71 chr2 44532532 44532823 -208723760 - MER21B LTR ERV1 -491 372 78 10017 161 73 52 chr2 44532930 44532990 -208723593 - L1M4 LINE L1 -5319 2246 2189 2193 129 0 7 chr2 44532990 44